BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 002814
         (877 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Vitis vinifera]
          Length = 867

 Score = 1407 bits (3641), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 686/879 (78%), Positives = 754/879 (85%), Gaps = 14/879 (1%)

Query: 1   MAS-TPPHCSITATKPYQNHQYPHNHLKNNHHRQSHHPSSRPHWTSHKVSLTKPPLSPSP 59
           MAS TPPHCSITA KPYQN  YP N  KN+H+           W+SHKVSLT P   PSP
Sbjct: 1   MASPTPPHCSITAAKPYQNLHYPQNPTKNHHNNHH--------WSSHKVSLTNP--LPSP 50

Query: 60  RNAPKPAATSTTVAPNPKP-FHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMS 118
           RNA KP A S   A N    F SLSPLP SKSEL  DFSGRRSTRFVSKMHFGRPK A +
Sbjct: 51  RNAAKPGAASPATATNRNSNFPSLSPLPPSKSELTADFSGRRSTRFVSKMHFGRPKTAAA 110

Query: 119 TRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQC 178
            RH+  AEEAL H   FA DD  +  +L  FE +LCG+DDYTFLLRELGNRGEW+KAI+C
Sbjct: 111 ARHTSTAEEALRHAIRFASDDKGIDSVLLNFESRLCGSDDYTFLLRELGNRGEWAKAIRC 170

Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
           F FAV+RE+R+N+QGKLASAMISILGRLG+V+LAKN+FETALNEGYGNTVYAFSALISAY
Sbjct: 171 FEFAVRREQRRNEQGKLASAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAY 230

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
           GRSGYC EAI VF +MK   LKPNLVTYNAVIDACGKGGVDF    EIFD+MLRNGVQPD
Sbjct: 231 GRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPD 290

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
           RITFNSLLAVC RGGLWEAARNLF+EM++RGI+QDIFTYNTLLDA+CKG QMDLAF+IM+
Sbjct: 291 RITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMS 350

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
           EMP K+I PNVVTYST+IDGYAKAGRLD+ALN+F+EMKF  IGLDRVSYNT+LSIYAKLG
Sbjct: 351 EMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLG 410

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           RFEEAL VCKEMESSGI+KDAVTYNALLGGYGKQGKY+EV+R+FE+MKA+ + PNLLTYS
Sbjct: 411 RFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYS 470

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           TLIDVYSKGGLY+EAM++FREFK+AGLKADVVLYSALIDALCKNGLVESAVS LDEMTKE
Sbjct: 471 TLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKE 530

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
           GIRPNVVTYNSIIDAFGRS + EC +D        +  S++L  +  +D  + +   + D
Sbjct: 531 GIRPNVVTYNSIIDAFGRSGSAECVIDPPYETNVSKMSSSSLKVV--EDATESEVGDKED 588

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
           NQIIK+FGQL AEK    KKENR RQEILCIL VF KMH+L IKPNVVTFSAILNACSRC
Sbjct: 589 NQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAILNACSRC 648

Query: 659 NSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNA 718
           NSFEDASMLLEELRLFDNQVYGVAHGLLMGY DN+WVQA SLFDEVK MDSSTASAFYNA
Sbjct: 649 NSFEDASMLLEELRLFDNQVYGVAHGLLMGYGDNVWVQAQSLFDEVKQMDSSTASAFYNA 708

Query: 719 LTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSI 778
           LTDMLWHFGQ+RGAQLVVLEGKRR VWEN+WS SCLDLHLMSSGAARAMVHAWLLNI SI
Sbjct: 709 LTDMLWHFGQRRGAQLVVLEGKRRHVWENMWSNSCLDLHLMSSGAARAMVHAWLLNIRSI 768

Query: 779 VFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPM 838
           VFEGHELP+LLSILTGWGKHSKVVGDGALRRA+E LLTGMGAPF VA CNLGRFISTG +
Sbjct: 769 VFEGHELPQLLSILTGWGKHSKVVGDGALRRAIEALLTGMGAPFRVAKCNLGRFISTGAV 828

Query: 839 VASWLRESGTLKVLVLHDDRTHSENAGFDEMLNMQTLTL 877
           VA+WLRESGTLKVLVLHDDRT+ + A   ++ N+QTL L
Sbjct: 829 VAAWLRESGTLKVLVLHDDRTNPDRARCSQISNLQTLPL 867


>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 878

 Score = 1405 bits (3636), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 685/867 (79%), Positives = 754/867 (86%), Gaps = 15/867 (1%)

Query: 1   MASTPPHCSITATKPYQNHQYPHNHLKNNHHRQSHHPSSRPHWTSHKVSLTKPPLSPSPR 60
           MASTPPHCSITATKPYQNHQYP NHLKN  HRQ+HH      WT+ KVSLTKPPL+PSP 
Sbjct: 1   MASTPPHCSITATKPYQNHQYPQNHLKN--HRQTHHH----RWTNQKVSLTKPPLAPSPC 54

Query: 61  NAPKPAATSTTVAPNPKP----FHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIA 116
           NAPK AA +             FHSLSPL S KS+L+ DFSGRRSTRFVSK+HFGRPK  
Sbjct: 55  NAPKAAAAAAAATTTHHTPNPTFHSLSPLQSQKSDLSADFSGRRSTRFVSKLHFGRPKTN 114

Query: 117 MSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAI 176
           M+ RH+ VA EAL  V  + +DD +L ++L  FE +LCG DDYTFLLRELGNRG+ +KA+
Sbjct: 115 MN-RHTSVALEALQQVIQYGKDDKALENVLLNFESRLCGPDDYTFLLRELGNRGDSAKAV 173

Query: 177 QCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALIS 236
           +CF FAV+RE  KN+QGKLASAMIS LGRLGKV+LAK +F+TAL EGYG TVYAFSALIS
Sbjct: 174 RCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALIS 233

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQ 296
           AYGRSGYC EAI VF+SMK   L PNLVTYNAVIDACGKGGV+FK VVEIFD ML NGVQ
Sbjct: 234 AYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQ 293

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           PDRITFNSLLAVCSRGGLWEAAR LF+ MV +GIDQDIFTYNTLLDA+CKG QMDLAFEI
Sbjct: 294 PDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEI 353

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           M+EMP KNI PNVVTYSTMIDGYAK GRLDDALNMF+EMKFLG+GLDRVSYNT+LS+YAK
Sbjct: 354 MSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAK 413

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
           LGRFE+AL VCKEME++GIRKD VTYNALL GYGKQ +YDEVRR+FE+MK   VSPNLLT
Sbjct: 414 LGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLT 473

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           YSTLIDVYSKGGLYKEAM++FREFKQAGLKADVVLYSALIDALCKNGLVES+V+LLDEMT
Sbjct: 474 YSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMT 533

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
           KEGIRPNVVTYNSIIDAFGRSA+ +C VDD       Q ES  L ++  Q+  + Q A +
Sbjct: 534 KEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTALQVES--LSSIVVQEAIESQAADK 591

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
            DN+II++FG+L AEKA + K  N  +QEILCILGVFQKMH+LKIKPNVVTFSAILNACS
Sbjct: 592 EDNRIIEIFGKLAAEKACEAK--NSGKQEILCILGVFQKMHELKIKPNVVTFSAILNACS 649

Query: 657 RCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFY 716
           RC+SFEDASMLLEELRLFDNQVYGVAHGLLMGYR+N+W+QA SLFDEVKLMDSSTASAFY
Sbjct: 650 RCDSFEDASMLLEELRLFDNQVYGVAHGLLMGYRENVWLQAQSLFDEVKLMDSSTASAFY 709

Query: 717 NALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIH 776
           NALTDMLWHFGQKRGAQLVVLEGKRRQVWEN+WS+SCLDLHLMSSGAARAMVHAWLLNI 
Sbjct: 710 NALTDMLWHFGQKRGAQLVVLEGKRRQVWENIWSDSCLDLHLMSSGAARAMVHAWLLNIR 769

Query: 777 SIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTG 836
           SIVFEGHELPKLLSILTGWGKHSKVVGD ALRRAVE LL GMGAPF +A CNLGRFISTG
Sbjct: 770 SIVFEGHELPKLLSILTGWGKHSKVVGDSALRRAVEALLIGMGAPFRLAKCNLGRFISTG 829

Query: 837 PMVASWLRESGTLKVLVLHDDRTHSEN 863
            +VA+WL+ESGTL+VLVLHDDRTH EN
Sbjct: 830 SVVAAWLKESGTLEVLVLHDDRTHPEN 856


>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Cucumis sativus]
          Length = 868

 Score = 1334 bits (3453), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 649/877 (74%), Positives = 738/877 (84%), Gaps = 9/877 (1%)

Query: 1   MASTPPHCSITATKPYQNHQYPHNHLKNNHHRQSHHPSSRPHWTSHKVSLTKPPLSPSPR 60
           MASTPPHCSITA KPYQ HQYP N+LKN  HRQ+   +  P  T+HK  L KP  S    
Sbjct: 1   MASTPPHCSITAAKPYQTHQYPQNNLKN--HRQNARQNG-PWTTTHKFPLVKPLPSTPGH 57

Query: 61  NAPKPAATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTR 120
           +A K  +T  + +PN   F SL  LP+SKSELA +FSGRRSTRFVSK HFGRPK +M+TR
Sbjct: 58  SATKSTSTPLSQSPN---FPSLCSLPTSKSELASNFSGRRSTRFVSKFHFGRPKSSMTTR 114

Query: 121 HSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFA 180
           HS +AEE LH V  F +DD SL +IL  FE KLCG++DYTFLLRELGNRGE  KAI+CF 
Sbjct: 115 HSAIAEEVLHQVLQFGKDDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFD 174

Query: 181 FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           FA+ RE RKN++GKLASAMIS LGRLGKV+LAK +FETAL+EGYGNTV+AFSALISAYG+
Sbjct: 175 FALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGK 234

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
           SGY  EAI VF SMK   LKPNLVTYNAVIDACGKGGV+FK VVEIF++MLRNGVQPDRI
Sbjct: 235 SGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRI 294

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           T+NSLLAVCSRGGLWEAARNLFNEM+ RGIDQD+FTYNTLLDA+CKG QMDLA+EIM EM
Sbjct: 295 TYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEM 354

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
           P K I PNVVTYSTM DGYAKAGRL+DALN+++EMKFLGIGLDRVSYNT+LSIYAKLGRF
Sbjct: 355 PGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRF 414

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           E+AL VCKEM SSG++KD VTYNALL GYGKQGK++EV R+F++MK D V PNLLTYSTL
Sbjct: 415 EDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTL 474

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           IDVYSKG LY+EAM++FREFKQAGLKADVVLYS LI+ALCKNGLV+SAV LLDEMTKEGI
Sbjct: 475 IDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGI 534

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
           RPNVVTYNSIIDAFGRS T E  VD V     +Q ES +   +   D+ ++      D  
Sbjct: 535 RPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPSFMLIEGVDESEIN---WDDGH 591

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           + K + QLV+EK G  KKE   ++EI  IL VF+KMH+L+IKPNVVTFSAILNACSRC S
Sbjct: 592 VFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKS 651

Query: 661 FEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALT 720
            EDASMLLEELRLFDNQVYGVAHGLLMG+ +N+W+QA  LFDEVK MDSSTASAFYNALT
Sbjct: 652 IEDASMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKQMDSSTASAFYNALT 711

Query: 721 DMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVF 780
           DMLWHFGQKRGAQLVVLEGKRR+VWE +WS+SCLDLHLMSSGAARAMVHAWLL IHS+VF
Sbjct: 712 DMLWHFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVF 771

Query: 781 EGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVA 840
           EGH+LPKLLSILTGWGKHSKVVGDGALRRA+E LLT MGAPF VA CN+GR++STG +VA
Sbjct: 772 EGHQLPKLLSILTGWGKHSKVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVA 831

Query: 841 SWLRESGTLKVLVLHDDRTHSENAGFDEMLNMQTLTL 877
           +WL+ESGTLK+LVLHDDRTH ++   D +  +QT++L
Sbjct: 832 AWLKESGTLKLLVLHDDRTHPDSENMDLISKLQTISL 868


>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Cucumis sativus]
          Length = 868

 Score = 1333 bits (3451), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 649/877 (74%), Positives = 736/877 (83%), Gaps = 9/877 (1%)

Query: 1   MASTPPHCSITATKPYQNHQYPHNHLKNNHHRQSHHPSSRPHWTSHKVSLTKPPLSPSPR 60
           MASTPPHCSITA KPYQ HQYP N+LKN  HRQ+   +  P  T+HK  L KP  S    
Sbjct: 1   MASTPPHCSITAAKPYQTHQYPQNNLKN--HRQNARQNG-PWTTTHKFPLVKPLPSTPGH 57

Query: 61  NAPKPAATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTR 120
           +A K  +T  + +PN   F SL  LP+SKSELA +FSGRRSTRFVSK HFGRPK +M+TR
Sbjct: 58  SATKSTSTPLSQSPN---FPSLCSLPTSKSELASNFSGRRSTRFVSKFHFGRPKSSMTTR 114

Query: 121 HSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFA 180
           HS +AEE LH V  F +DD SL +IL  FE KLCG++DYTFLLRELGNRGE  KAI+CF 
Sbjct: 115 HSAIAEEVLHQVLQFGKDDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFD 174

Query: 181 FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           FA+ RE RKN++GKLASAMIS LGRLGKV+LAK +FETAL+EGYGNTV+AFSALISAYG+
Sbjct: 175 FALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGK 234

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
           SGY  EAI VF SMK   LKPNLVTYNAVIDACGKGGV+FK VVEIF++MLRNGVQPDRI
Sbjct: 235 SGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRI 294

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           T+NSLLAVCSRGGLWEAARNLFNEM+ RGIDQD+FTYNTLLDA+CKG QMDLA+EIM EM
Sbjct: 295 TYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEM 354

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
           P K I PNVVTYSTM DGYAKAGRL+DALN+++EMKFLGIGLDRVSYNT+LSIYAKLGRF
Sbjct: 355 PGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRF 414

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           E+AL VCKEM SSG++KD VTYNALL GYGKQGK++EV R+F++MK D V PNLLTYSTL
Sbjct: 415 EDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTL 474

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           IDVYSKG LY+EAM++FREFKQAGLKADVVLYS LI+ALCKNGLV+SAV LLDEMTKEGI
Sbjct: 475 IDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGI 534

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
           RPNVVTYNSIIDAFGRS T E  VD V     +Q ES     +   D+ ++      D  
Sbjct: 535 RPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPTFMLIEGVDESEIN---WDDGH 591

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           + K + QLV+EK G  KKE   ++EI  IL VF+KMH+L+IKPNVVTFSAILNACSRC S
Sbjct: 592 VFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKS 651

Query: 661 FEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALT 720
            EDASMLLEELRLFDNQVYGVAHGLLMG+ +N+W+QA  LFDEVK MDSSTASAFYNALT
Sbjct: 652 IEDASMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKQMDSSTASAFYNALT 711

Query: 721 DMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVF 780
           DMLWHFGQKRGAQLVVLEGKRR+VWE +WS+SCLDLHLMSSGAARAMVHAWLL IHS+VF
Sbjct: 712 DMLWHFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVF 771

Query: 781 EGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVA 840
           EGH+LPKLLSILTGWGKHSKVVGDGALRRA+E LLT MGAPF VA CN+GR++STG +VA
Sbjct: 772 EGHQLPKLLSILTGWGKHSKVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVA 831

Query: 841 SWLRESGTLKVLVLHDDRTHSENAGFDEMLNMQTLTL 877
           +WL+ESGTLK+LVLHDDRTH +    D +  +QT++L
Sbjct: 832 AWLKESGTLKLLVLHDDRTHPDTENMDLISKLQTISL 868


>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 917

 Score = 1181 bits (3054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/837 (69%), Positives = 677/837 (80%), Gaps = 34/837 (4%)

Query: 28  NNHHRQSHHPS--SRPHWTSHKVSLTKPPLSPSPRNAPKPAATSTTVAP---NPKPFHSL 82
           NNH +   +P+   RP+            +S SPR +  P ++  TVAP   +  P  + 
Sbjct: 76  NNHRQTRQNPNYNHRPY-----------GVSSSPRGSAPPPSSVATVAPAQLSQTP--NF 122

Query: 83  SPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSL 142
           SPL + KS+L+ DFSGRRSTRFVSKMHFGRPK  M+TRHS  AE+AL +   F+ DD   
Sbjct: 123 SPLQTPKSDLSSDFSGRRSTRFVSKMHFGRPKTTMATRHSSAAEDALQNAIDFSGDDEMF 182

Query: 143 GDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
             ++  FE KLCG+DD T+++RELGNRGE  KA+  + FAVKRE RKN+QGKLASAMIS 
Sbjct: 183 HSLMLSFESKLCGSDDCTYIIRELGNRGECDKAVGFYEFAVKRERRKNEQGKLASAMIST 242

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           LGR GKV +AK IFETA + GYGNTVYAFSALISAYGRSG  +EAISVFNSMK Y L+PN
Sbjct: 243 LGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPN 302

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           LVTYNAVIDACGKGG++FK V + FD+M RN VQPDRITFNSLLAVCSRGGLWEAARNLF
Sbjct: 303 LVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLF 362

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           +EM +R I+QD+F+YNTLLDAICKG QMDLAFEI+A+MPAK I PNVV+YST+IDG+AKA
Sbjct: 363 DEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKA 422

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           GR D+ALN+F EM++L I LDRVSYNT+LSIY K+GR EEAL + +EM S GI+KD VTY
Sbjct: 423 GRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY 482

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           NALLGGYGKQGKYDEV+++F +MK + V PNLLTYSTLID YSKGGLYKEAM++FREFK 
Sbjct: 483 NALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKS 542

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
           AGL+ADVVLYSALIDALCKNGLV SAVSL+DEMTKEGI PNVVTYNSIIDAFGRSAT E 
Sbjct: 543 AGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMER 602

Query: 563 TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
           + D             +L    S   +  +  G   N++I++FGQL +E  G  +    C
Sbjct: 603 SAD--------YSNGGSLPFSSSALSELTETEG---NRVIQLFGQLTSE--GNNRMTKDC 649

Query: 623 R---QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVY 679
           +   QE+ CIL VF+KMH+L+IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN+VY
Sbjct: 650 KEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVY 709

Query: 680 GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEG 739
           GV HGLLMG R+N+W+QA SLFD+V  MD STASAFYNALTDMLWHFGQKRGA+LV LEG
Sbjct: 710 GVVHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEG 769

Query: 740 KRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHS 799
           + RQVWENVWS+SCLDLHLMSSGAARAMVHAWLLNI SIV+EGHELPK+LSILTGWGKHS
Sbjct: 770 RSRQVWENVWSDSCLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHS 829

Query: 800 KVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHD 856
           KVVGDGAL+RAVEVLL GM APF ++ CN+GRF S+G +VA+WLRES TLK+L+LHD
Sbjct: 830 KVVGDGALKRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLLILHD 886


>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
 gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g31400, chloroplastic; Flags: Precursor
 gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
 gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
          Length = 918

 Score = 1175 bits (3040), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/836 (69%), Positives = 671/836 (80%), Gaps = 32/836 (3%)

Query: 28  NNHHRQSHHPS--SRPHWTSHKVSLTKPPLSPSPRNAPKPAATSTTVAP----NPKPFHS 81
           NNH +   +P+   RP+  S            SPR +  P ++  TVAP     P  F  
Sbjct: 76  NNHRQTRQNPNYNHRPYGASS-----------SPRGSAPPPSSVATVAPAQLSQPPNF-- 122

Query: 82  LSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVS 141
            SPL + KS+L+ DFSGRRSTRFVSKMHFGR K  M+TRHS  AE+AL +   F+ DD  
Sbjct: 123 -SPLQTPKSDLSSDFSGRRSTRFVSKMHFGRQKTTMATRHSSAAEDALQNAIDFSGDDEM 181

Query: 142 LGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
              ++  FE KLCG+DD T+++RELGNR E  KA+  + FAVKRE RKN+QGKLASAMIS
Sbjct: 182 FHSLMLSFESKLCGSDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMIS 241

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            LGR GKV +AK IFETA   GYGNTVYAFSALISAYGRSG  +EAISVFNSMK Y L+P
Sbjct: 242 TLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRP 301

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           NLVTYNAVIDACGKGG++FK V + FD+M RNGVQPDRITFNSLLAVCSRGGLWEAARNL
Sbjct: 302 NLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNL 361

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F+EM +R I+QD+F+YNTLLDAICKG QMDLAFEI+A+MP K I PNVV+YST+IDG+AK
Sbjct: 362 FDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAK 421

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           AGR D+ALN+F EM++LGI LDRVSYNT+LSIY K+GR EEAL + +EM S GI+KD VT
Sbjct: 422 AGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVT 481

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YNALLGGYGKQGKYDEV+++F +MK + V PNLLTYSTLID YSKGGLYKEAM+IFREFK
Sbjct: 482 YNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFK 541

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            AGL+ADVVLYSALIDALCKNGLV SAVSL+DEMTKEGI PNVVTYNSIIDAFGRSAT +
Sbjct: 542 SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE-N 620
            +  D          S+ L A+   +           N++I++FGQL  E   +  K+  
Sbjct: 602 RSA-DYSNGGSLPFSSSALSALTETE----------GNRVIQLFGQLTTESNNRTTKDCE 650

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG 680
              QE+ CIL VF+KMH+L+IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN+VYG
Sbjct: 651 EGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYG 710

Query: 681 VAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGK 740
           V HGLLMG R+N+W+QA SLFD+V  MD STASAFYNALTDMLWHFGQKRGA+LV LEG+
Sbjct: 711 VVHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGR 770

Query: 741 RRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSK 800
            RQVWENVWS+SCLDLHLMSSGAARAMVHAWLLNI SIV+EGHELPK+LSILTGWGKHSK
Sbjct: 771 SRQVWENVWSDSCLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSK 830

Query: 801 VVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHD 856
           VVGDGALRRAVEVLL GM APF ++ CN+GRF S+G +VA+WLRES TLK+L+LHD
Sbjct: 831 VVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLLILHD 886


>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
 gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
          Length = 718

 Score = 1170 bits (3028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 571/729 (78%), Positives = 632/729 (86%), Gaps = 19/729 (2%)

Query: 117 MSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAI 176
           M TRH+ VA+EAL +V  + +D+ +L ++L  FE +L G+DDY FLLRELGNRG+  KAI
Sbjct: 1   MGTRHTSVAQEALQNVIEYGKDERALENVLLNFESRLSGSDDYVFLLRELGNRGDCKKAI 60

Query: 177 QCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALIS 236
            CF FAVKRE +KN+QGKLASAMIS LGRLGKV++AK +F+ AL EGYGNTVYAFSA+IS
Sbjct: 61  CCFEFAVKRERKKNEQGKLASAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIIS 120

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQ 296
           AYGRSGYC EAI +F SMK Y LKPNLVTYNAVIDACGKGGV+FK V+EIFD+MLRNG+Q
Sbjct: 121 AYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQ 180

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           PDRITFNSLLAVCS+GGLWEAAR+L  EMV+RGIDQDIFTYNTLLDA+CKG Q+D+AFEI
Sbjct: 181 PDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEI 240

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           M+EMPAKNI PNVVTYSTMIDGYAKAGRLDDA N+F+EMKFLGI LDRVSYNT+LSIYAK
Sbjct: 241 MSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAK 300

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
           LGRFEEA+ VC+EME+SGIRKD VTYNALLGGYGKQ KYD VR++FE+MKA  VSPNLLT
Sbjct: 301 LGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLT 360

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           YSTLIDVYSKGGLY+EAM +FREFK+AGLKADVVLYSALIDALCKNGLVESAVSLLDEMT
Sbjct: 361 YSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 420

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE--- 593
           KEGIRPNVVTYNSIIDAFGR ATTE  VDD       Q     +D++ S   +   +   
Sbjct: 421 KEGIRPNVVTYNSIIDAFGRPATTESVVDD-----AGQTSELQIDSLSSSAVEKATKSLV 475

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
           A R DN+IIK+FGQL AEKAGQ K  N   QE++CILGVF KMH+L+IKPNVVTFSAILN
Sbjct: 476 ADREDNRIIKIFGQLAAEKAGQAK--NSGGQEMMCILGVFHKMHELEIKPNVVTFSAILN 533

Query: 654 ACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTAS 713
           ACSRCNSFE+ASMLLEELRLFDNQVYGVAHGLLMGYR+N+W QA SLFDEVKLMDSSTAS
Sbjct: 534 ACSRCNSFEEASMLLEELRLFDNQVYGVAHGLLMGYRENVWEQAQSLFDEVKLMDSSTAS 593

Query: 714 AFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLL 773
           AFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLL
Sbjct: 594 AFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLL 653

Query: 774 NIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFI 833
           N+ +IVFEGHE+PKLL         SKVVGD  LRRAVE LL GMGAPF  A CNLGR I
Sbjct: 654 NVRAIVFEGHEVPKLL---------SKVVGDSTLRRAVEALLMGMGAPFRSAKCNLGRLI 704

Query: 834 STGPMVASW 842
           STG +VASW
Sbjct: 705 STGSVVASW 713


>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score =  937 bits (2421), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/609 (75%), Positives = 518/609 (85%), Gaps = 32/609 (5%)

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL--WEAAR-----NLFNEMVHR 328
           G  D+  ++    +   +G++P+ +T+N+++  C +GG+    AA      NLF+EM++R
Sbjct: 147 GSDDYTFLLRELGNRGDSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYR 206

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           GI+QDIFTYNTLLDA+CKG QMDLAF+IM+EMP K+I PNVVTYST+IDGYAKAGRLD+A
Sbjct: 207 GIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEA 266

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           LN+F+EMKF  IGLDRVSYNT+LSIYAKLGRFEEAL VCKEMESSGI+KDAVTYNALLGG
Sbjct: 267 LNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGG 326

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           YGKQGKY+EV+R+FE+MKA+ + PNLLTYSTLIDVYSKGGLY+EAM++FREFK+AGLKAD
Sbjct: 327 YGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKAD 386

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
           VVLYSALIDALCKNGLVESAVS LDEMTKEGIRPNVVTYNSIIDAFGRS   E   D  E
Sbjct: 387 VVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVE---DATE 443

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
            ++G               DK+       DNQIIK+FGQL AEK    KKENR RQEILC
Sbjct: 444 SEVG---------------DKE-------DNQIIKIFGQLAAEKTCHAKKENRGRQEILC 481

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
           IL VF KMH+L IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG
Sbjct: 482 ILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 541

Query: 689 YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENV 748
           Y DN+WVQA SLFDEVK MDSSTASAFYNALTDMLWHFGQ+RGAQLVVLEGKRR VWEN+
Sbjct: 542 YGDNVWVQAQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEGKRRHVWENM 601

Query: 749 WSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALR 808
           WS SCLDLHLMSSGAARAMVHAWLLNI SIVFEGHELP+LLSILTGWGKHSKVVGDGALR
Sbjct: 602 WSNSCLDLHLMSSGAARAMVHAWLLNIRSIVFEGHELPQLLSILTGWGKHSKVVGDGALR 661

Query: 809 RAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDDRTHSENAGFDE 868
           RA+E LLTGMGAPF VA CNLGRFISTG +VA+WLRESGTLKVLVLHDDRT+ + A   +
Sbjct: 662 RAIEALLTGMGAPFRVAKCNLGRFISTGAVVAAWLRESGTLKVLVLHDDRTNPDRARCSQ 721

Query: 869 MLNMQTLTL 877
           + N+QTL L
Sbjct: 722 ISNLQTLPL 730



 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 211/560 (37%), Positives = 297/560 (53%), Gaps = 61/560 (10%)

Query: 1   MAS-TPPHCSITATKPYQNHQYPHNHLKNNHHRQSHHPSSRPHWTSHKVSLTKPPLSPSP 59
           MAS TPPHCSITA KPYQN  YP N  KN+H+           W+SHKVSLT P   PSP
Sbjct: 1   MASPTPPHCSITAAKPYQNLHYPQNPTKNHHNNHH--------WSSHKVSLTNP--LPSP 50

Query: 60  RNAPKPAATSTTVAPNPKP-FHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMS 118
           RNA KP A S   A N    F SLSPLP SKSEL  DFSGRRSTRFVSKMHFGRPK A +
Sbjct: 51  RNAAKPGAASPATATNRNSNFPSLSPLPPSKSELTADFSGRRSTRFVSKMHFGRPKTAAA 110

Query: 119 TRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQC 178
            RH+  AEEAL H   FA DD  +  +L  FE +LCG+DDYTFLLRELGNRG+       
Sbjct: 111 ARHTSTAEEALRHAIRFASDDKGIDSVLLNFESRLCGSDDYTFLLRELGNRGDSGLKPNL 170

Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAK--------NIFETALNEGYGNTVYA 230
             +               +A+I   G+ G VD  +        N+F   L  G    ++ 
Sbjct: 171 VTY---------------NAVIDACGK-GGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFT 214

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           ++ L+ A  + G    A  + + M R ++ PN+VTY+ VID   K G      + +F++M
Sbjct: 215 YNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAG-RLDEALNLFNEM 273

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
               +  DR+++N+LL++ ++ G +E A N+  EM   GI +D  TYN LL    K  + 
Sbjct: 274 KFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKY 333

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           +    +  EM A+ I PN++TYST+ID Y+K G   +A+ +F E K  G+  D V Y+ +
Sbjct: 334 EEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSAL 393

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +    K G  E A+    EM   GIR + VTYN+++  +G+ G  ++        K D  
Sbjct: 394 IDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDATESEVGDKED-- 451

Query: 471 SPNLLTYSTLIDVYSKGGLYKEA---------------MQIFREFKQAGLKADVVLYSAL 515
                  + +I ++ +    K                 + +F +  +  +K +VV +SA+
Sbjct: 452 -------NQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAI 504

Query: 516 IDALCKNGLVESAVSLLDEM 535
           ++A  +    E A  LL+E+
Sbjct: 505 LNACSRCNSFEDASMLLEEL 524


>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 849

 Score =  929 bits (2402), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/863 (53%), Positives = 620/863 (71%), Gaps = 26/863 (3%)

Query: 3   STPPHCSITATKPYQNHQYPHNHLKNNHHRQSHHPSSRPHWTSHKVSLTKPPLSPSPRNA 62
           + PP+ S   + P Q  Q       N+H R  H+ +S+             PLS +  ++
Sbjct: 7   TPPPNYSSLPSAPRQRRQ-------NHHKRHRHYSNSK-----------SAPLSAAAGSS 48

Query: 63  PKPAATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTR-H 121
              A      +       SL  L   +S LAP+FSGRRSTRF +KMH G P++  +   H
Sbjct: 49  NAAATGRGNGSGRASTLGSL--LEGRQSRLAPEFSGRRSTRFAAKMHSGMPRVTPNKHAH 106

Query: 122 SVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAF 181
           S  A+EAL ++     +  ++ ++L  +E +L   +DY ++L+E GN G +  A +CF F
Sbjct: 107 SAAADEALSYLFNAGNNIAAIDNVLIAYESELWEVEDYIYMLKEFGNTGHFLLATKCFDF 166

Query: 182 AVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
            + ++  +  +GKL S MI  LGRLG+++ A  +FE+A  EG+GNTVY+FSA+ISAYGR+
Sbjct: 167 IIWKQNGRIAKGKLVSTMIGTLGRLGEINHALRLFESARLEGHGNTVYSFSAMISAYGRN 226

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
           G+  +A+ +F SM+ + + PNL++YN++IDA  KG VDF  VV+ FD+ML  G+ PDR+T
Sbjct: 227 GHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDEMLAEGIVPDRLT 286

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           +NSLL+VC+  G+WE A+ L +EM  +GI +D FTYNT LD +CKG Q+DLA  ++ EM 
Sbjct: 287 YNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMS 346

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
           ++ + P VVTYSTMIDG AKA  L+DALN++ EMK   I +DRVSYNT++ IYAKLGRF+
Sbjct: 347 SRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFD 406

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           EA+  CKEMES G+++D VTYNALL GYG+ G YDEVRR+FE+MKA  + PN LTYST+I
Sbjct: 407 EAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMI 466

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           DVY+KGG+++EAM ++++FK+A L+ DVV Y+++ID+LCKNGLVES++ LL  M ++GI+
Sbjct: 467 DVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIK 526

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
           PNVVT+NSIIDA  +S T E  V    + +  +  +  L +M   D     + G  D++I
Sbjct: 527 PNVVTFNSIIDASRQSPTLEYGVHGSSQAV--EYPTEQLSSMLI-DGAFQNKTG--DDRI 581

Query: 602 IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
           +K+F QL AEKAG  +K+ + RQ+  CIL +FQKMH+L IKPNVVTFSAILNACSRCNSF
Sbjct: 582 LKMFEQLAAEKAGHREKDRKGRQDQHCILWLFQKMHELNIKPNVVTFSAILNACSRCNSF 641

Query: 662 EDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
           EDASMLL  LRLFDNQVYGV HGLLMGYR+ +W QA +LFDE++ MDSSTASAFYNALTD
Sbjct: 642 EDASMLLGALRLFDNQVYGVTHGLLMGYREQVWFQAQTLFDEMRRMDSSTASAFYNALTD 701

Query: 722 MLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFE 781
           MLW FGQ+RGA++VV EG+RR VW+  WS SCLDLHLMS GAA AMVH+WLLN+HS +FE
Sbjct: 702 MLWQFGQRRGAEMVVTEGRRRNVWKGEWSISCLDLHLMSCGAACAMVHSWLLNMHSTLFE 761

Query: 782 GHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVAS 841
           G ELPK+++ILTGWGKHSKV+GDG L+RAVE LL GMG+PF +A  NLGR+ S G ++A+
Sbjct: 762 GSELPKIVTILTGWGKHSKVMGDGTLKRAVEALLNGMGSPFRIAEGNLGRYYSPGNLLAT 821

Query: 842 WLRESGTLKVLVLHDDRTHSENA 864
           WLR+     +LVL+D   HS+ A
Sbjct: 822 WLRQPSIFNLLVLYDVLNHSQAA 844


>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 890

 Score =  874 bits (2258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/884 (50%), Positives = 600/884 (67%), Gaps = 30/884 (3%)

Query: 3   STPPHCSITATKPYQNHQYPHNHLKNNHHRQSHHPS---SRPHWTSHKVSLTKPPLSPSP 59
           + PP+ S     P     + HNH    + R SHH +    R  W+S     +    +P  
Sbjct: 6   TPPPNYSSLPAAPRNAENHHHNHKNQQNSRHSHHSTHKRPRDRWSSSSRHYSSSNSAPLA 65

Query: 60  RNAPKPAATSTTVAPNPK-------------PFHSLSPLPSSKSELAPDFSGRRSTRFVS 106
             A      + +                   P +S + L   +S LAP+FSGR+STRF +
Sbjct: 66  AAAVAEVGANGSGNAAAAAAAAGGRGNGRGRPAYSSTLLEGRQSRLAPEFSGRKSTRFAA 125

Query: 107 KMHFGRPKIAMSTR-HSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRE 165
           KMH G P++  +   HS  A+EAL  +     +  ++ ++   +E KL   +DY ++L+E
Sbjct: 126 KMHSGMPRVTPNKHAHSAAADEALSCLFKAGNNIAAIDNVFISYEHKLWEVEDYIYMLKE 185

Query: 166 LGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYG 225
            GN      A +CF F + ++  + D+GKL SAMI  LGRLG+++LA  +FE A  EGYG
Sbjct: 186 FGNTRSLLHAKKCFDFIMSKQNGRVDKGKLVSAMIGTLGRLGEINLALGLFERARLEGYG 245

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
           +TV++FSA+ISA+GR+G   +A+ +F SM  + + PN++TYN++IDA  KG V F  VV+
Sbjct: 246 STVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAGAKGEVSFDVVVK 305

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
            +D+M+ NG+ PDR+T+NSLL+VC+  G+WE A+ L +EM HR I  D+FTYNT LD +C
Sbjct: 306 FYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLC 365

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  Q+DLA  +  EM +K + PNVVTYS M+DGYAKA  L+DALN++ EMK   + LDRV
Sbjct: 366 KAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRV 425

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           SYNT++ IY KLG  +EA+  CKEME SGI +D VTYNALL GYGK G YDEVRR+FE+M
Sbjct: 426 SYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEM 485

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           KA  + PN LTYST+ID+Y+KG +++EAM ++REFK A L+ DVV YSA+ID LCKNGL+
Sbjct: 486 KARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLM 545

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           ES++ LL  M ++GI+PNVVT+NSIIDA  +S T E          G    S  +D    
Sbjct: 546 ESSIMLLMAMMEKGIKPNVVTFNSIIDASQQSPTLE---------YGVNGSSDAIDYPIE 596

Query: 586 QDDKDVQEAGRT----DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
           Q    V +        +++I+K+F QL AEKAG  KK    RQ+  CIL +FQKMH+L I
Sbjct: 597 QSSPIVIDGAFQNKPGEDRILKMFEQLAAEKAGHLKKNRSGRQDKHCILWLFQKMHELNI 656

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLF 701
           KPNVVTFSAILNACS CNS+EDAS+LL+ LRLFDNQVYGV +GLLMGYR+ +W+ A +LF
Sbjct: 657 KPNVVTFSAILNACSLCNSYEDASLLLDTLRLFDNQVYGVTNGLLMGYREQVWLSAETLF 716

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSS 761
           DE+  MD ST+SAFYNALTDMLWHFGQKRGA++VV+EG+RR VW+  WS SCLDLHLMS 
Sbjct: 717 DELMCMDPSTSSAFYNALTDMLWHFGQKRGAEMVVIEGRRRNVWKGEWSISCLDLHLMSC 776

Query: 762 GAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAP 821
           GAA AMVH+WLL++HS +F+G +LPK ++ILTGWGKHSKV+GDG L++AVE LL GMG+P
Sbjct: 777 GAACAMVHSWLLSLHSSLFQGIQLPKFVNILTGWGKHSKVLGDGTLKKAVEALLNGMGSP 836

Query: 822 FWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDDRTHSENAG 865
           F +   NLGR +S G ++ +WL + G   +LVL D   HS+ A 
Sbjct: 837 FRIYENNLGRLVSPGEVLTAWLTKPGVFNLLVLSDVLNHSQPAA 880


>gi|356567150|ref|XP_003551784.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Glycine max]
          Length = 875

 Score =  869 bits (2245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/886 (52%), Positives = 601/886 (67%), Gaps = 25/886 (2%)

Query: 1   MASTP---PHCSITATKPYQNHQYPHNHLKNNHHRQSHHPSSRPHWTSHKVSLTKPPLSP 57
           MASTP   PH S    +P  N+     H +N  H + ++  +R  W+S        P S 
Sbjct: 1   MASTPTPRPHFSSVPPRPSSNNNQRRYHSQNRSHHRRNNNQNR--WSSSSTRYYSSPASS 58

Query: 58  SPRNAPKPAATSTTVAPNPKPFHSLSP-LPSSKSELAPDFSGRRSTRFVSKMHFGRPK-I 115
           +    P  AAT++          SLSP L + K+ LAP+FSGR S R   KM+ G P+ +
Sbjct: 59  AGAGIPSAAATASAAF-----LSSLSPWLGAQKTRLAPEFSGRPSNRNPGKMNSGGPRAV 113

Query: 116 AMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKA 175
             + +HS  AEE LH +T    D  ++ ++L    ++L  A+DY +LL+E  N G+   A
Sbjct: 114 PNNQQHSKAAEEVLHSLTNAGNDVAAIDNVL--LNYRLYVAEDYVYLLKEFANTGDLLLA 171

Query: 176 IQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALI 235
            + + FA+ R       GKL S MI  LGRL K++LA N+FE + N GYGNTVY+FSA+I
Sbjct: 172 TRTYNFAMSRATDNTFMGKLTSNMIRTLGRLKKIELALNLFEESRNRGYGNTVYSFSAMI 231

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV 295
           SA GR+    EA+S+  SM  + L+PNLVTYNA+IDA  KG + F+ VV+  ++M+  G 
Sbjct: 232 SALGRNDCFSEAVSLLRSMGNFGLEPNLVTYNAIIDAGAKGELPFEIVVKFLEEMIAAGC 291

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA-F 354
            PDR+T+NSLL  C   G W+  R+L  EM  +GI +D++TYNT +DA+CKG +MDLA  
Sbjct: 292 LPDRLTYNSLLKTCVAKGRWQLCRDLLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARH 351

Query: 355 EIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY 414
            I  EMPAKNI PNVVTYST++ GY+KA R +DALN++ EMK L I LDRVSYNT++ +Y
Sbjct: 352 AIDVEMPAKNILPNVVTYSTLMAGYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLY 411

Query: 415 AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
           A LG FEEA+   KEME  GI+ D VTYNAL+ GYG+  KY EVR++F++MKA  + PN 
Sbjct: 412 ANLGWFEEAVGKFKEMECCGIKNDVVTYNALIEGYGRHNKYVEVRKLFDEMKARRIYPND 471

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           LTYSTLI +Y+KG +Y EAM ++RE KQ G+K DVV YSALIDALCKNGL+ES++ LLD 
Sbjct: 472 LTYSTLIKIYTKGRMYAEAMDVYRELKQEGMKTDVVFYSALIDALCKNGLIESSLRLLDV 531

Query: 535 MTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVERDLGKQ--KESANLDAMCSQDDK 589
           MT++G RPNVVTYNSIIDAF    +    EC VD   +    Q    S+ L A   QD  
Sbjct: 532 MTEKGSRPNVVTYNSIIDAFRIGQQLPALECAVDTSFQANEHQIKPSSSRLSAGNFQD-- 589

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
             Q+ G  D +I+K+  QL AEKAG  KK+ R RQ+   ++ +FQKM +++IKPNVVTFS
Sbjct: 590 --QKTGNND-EIMKMLEQLAAEKAGLMKKDKRSRQDSFYLVQIFQKMQEMEIKPNVVTFS 646

Query: 650 AILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDS 709
           AILNACS C +F+DAS LL+ L +FD+ VYGVAHGLLMG+   +W QA +LFDE++ +DS
Sbjct: 647 AILNACSCCETFQDASKLLDALCMFDSHVYGVAHGLLMGHGQGLWNQAQTLFDELEHLDS 706

Query: 710 STASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVH 769
           STASAFYNALTDMLWHFGQK GAQ VV+EG+ R VW+  WS  CLDLHL S GAA AMVH
Sbjct: 707 STASAFYNALTDMLWHFGQKLGAQTVVIEGRNRNVWKGGWSTECLDLHLTSCGAACAMVH 766

Query: 770 AWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNL 829
            WLL + + VF G + P +LSILTGWGKHSKVVG+G LR+AVE LL G+GAPF ++ CNL
Sbjct: 767 TWLLELRTTVFGGQKPPPILSILTGWGKHSKVVGNGTLRKAVEALLNGIGAPFQISECNL 826

Query: 830 GRFISTGPMVASWLRESGTLKVLVLHDDRTHSENAGFDEMLNMQTL 875
           GRF S GP V +WLR+  TL VL+LHD   +S+    ++  N+ +L
Sbjct: 827 GRFKSEGPEVTAWLRQPSTLNVLLLHDCIVYSQPVERNQTFNIPSL 872


>gi|356526577|ref|XP_003531893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Glycine max]
          Length = 878

 Score =  863 bits (2230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/798 (55%), Positives = 568/798 (71%), Gaps = 12/798 (1%)

Query: 85  LPSSKSELAPDFSGRRSTRFVSKMHFGRPK-IAMSTRHSVVAEEALHHVTAFARDDVSLG 143
           L + K+ LAP+FSGRRS R   KM+ G P+ +  + +HS  AEE LH +T    D  ++ 
Sbjct: 83  LGAQKTRLAPEFSGRRSNRNPGKMNSGGPRAVPNNQQHSKAAEEVLHSLTNAGNDVSAID 142

Query: 144 DILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISIL 203
            +L    ++L  A+DY +LL+E  N G+   A + + FA+ R       GKL S MI  L
Sbjct: 143 SVL--LHYRLYVAEDYVYLLKEFANTGDLLLATRTYDFAMSRATDNTFMGKLTSNMIRTL 200

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
           GRL K++LA ++FE +   GYGNTVY+FSA+ISA GR+    EA+S+  SM ++ L+PNL
Sbjct: 201 GRLKKIELALDLFEESRTRGYGNTVYSFSAMISALGRNNRFSEAVSLLRSMGKFGLEPNL 260

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           VTYNA+IDA  KG + F+ VV+  ++M+  G  PDR+T+NSLL  C   G W+  R+L  
Sbjct: 261 VTYNAIIDAGAKGELTFEIVVKFLEEMIAAGCMPDRLTYNSLLKTCVAKGRWKLCRDLLA 320

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLA-FEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           EM  +GI +D++TYNT +DA+CKG +MDLA   I  EMPAKNI PNVVTYST++ GY+KA
Sbjct: 321 EMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAKNIWPNVVTYSTLMAGYSKA 380

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
            R +DALN++ EMK L I LDRVSYNT++ +YA LG FEEA+   KEME  GI+ D VTY
Sbjct: 381 ERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKNDVVTY 440

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           NAL+ GYG+  KY EV+++F++MKA  + PN LTYSTLI +Y+KG +Y EAM ++RE KQ
Sbjct: 441 NALIEGYGRHNKYVEVQKLFDEMKARRIYPNDLTYSTLIKIYTKGRMYAEAMDVYRELKQ 500

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG---RSAT 559
            G+K DVV YSALIDALCKNGL+ES++ LLD MT++G RPNVVTYNSIIDAF    +   
Sbjct: 501 EGMKTDVVFYSALIDALCKNGLIESSLRLLDVMTEKGSRPNVVTYNSIIDAFKIGQQLPA 560

Query: 560 TECTVDDVERDLGKQ--KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
            EC VD   +    Q    S+ L     QD K   + G  D +I+K+  QL AEKAG  K
Sbjct: 561 LECAVDTPFQANEHQIKPSSSRLIVGNFQDQK--TDIGNND-EIMKMLEQLAAEKAGLTK 617

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQ 677
           K+ R RQ+   I+ +FQKMH+++IKPNVVTFSAILNACS C +F+DAS LL+ LR+FD+Q
Sbjct: 618 KDKRSRQDNFFIVQIFQKMHEMEIKPNVVTFSAILNACSCCETFQDASKLLDALRVFDSQ 677

Query: 678 VYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVL 737
           VYGVAHGLLMG+R  IW Q  +LFDE++ +DSSTASAFYNALTDMLWHFGQK GAQ+VV+
Sbjct: 678 VYGVAHGLLMGHRQGIWDQTQTLFDELEHLDSSTASAFYNALTDMLWHFGQKLGAQMVVI 737

Query: 738 EGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGK 797
           EG+ R VW+  WS   LDLHL S GAA AMVH WLL + + VF G +LP +LSILTGWGK
Sbjct: 738 EGRNRNVWKGGWSTESLDLHLTSCGAACAMVHTWLLELRTTVFGGQKLPPILSILTGWGK 797

Query: 798 HSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDD 857
           HSKVVG+G LR+AVE LL G+GAPF ++ CNLGRF S GP VA+WLR+  TL VL+LHD 
Sbjct: 798 HSKVVGNGTLRKAVEALLNGIGAPFQISECNLGRFKSEGPEVAAWLRQPSTLNVLLLHDC 857

Query: 858 RTHSENAGFDEMLNMQTL 875
             +S+    ++  N+ +L
Sbjct: 858 IVYSQPVERNQTFNIPSL 875


>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  845 bits (2183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/781 (53%), Positives = 552/781 (70%), Gaps = 52/781 (6%)

Query: 92  LAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHV-TAFARDDVSLGDILKKFE 150
           L  +F GRRSTR VSK H GR K+ M  +HS  A+ A   + +A +    S   +L+K+ 
Sbjct: 98  LNAEFCGRRSTRLVSKFHHGRQKLYMG-KHSPEADMAAQEILSAPSMSGNSTALLLEKWS 156

Query: 151 FKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVD 210
            +L G +D+ +LLRELGNRGEW +A+Q + + V++   +++  KLAS MIS LGRLGKV+
Sbjct: 157 HQLVGLEDFPYLLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVE 216

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           +A ++F  A   G+GN VYA+SA++SAYGRSG C+EA+ VF +MK+   KPNL+TYN +I
Sbjct: 217 IALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTII 276

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           DACGKGGVD K  ++IF++M + GV+PDRITFNSL+AVCSRG LWE ++ +F EM  RGI
Sbjct: 277 DACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGI 336

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
           +QDIFTYNTL+DA+CKG QM+LA  IM+ M  KNISPNVVTYSTMIDGY K G  ++A+ 
Sbjct: 337 EQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIG 396

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           ++ +MK  G+  DRVSYNT++ IYAKLGRF++AL  CK+ME  G++ D VTYNAL+  YG
Sbjct: 397 LYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYG 456

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           KQGKY +   +F++MKA+ + PN+LTYS LID YSK G++++A  IF EFK+AGLK DVV
Sbjct: 457 KQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVV 516

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
           LYS+LID+ CK GLVE AV LL EMT+ GI+PN+VTYNS+IDA+GR+      VD+VE  
Sbjct: 517 LYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNG----QVDNVEAA 572

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR------- 623
            G                          N  I VF      K G    E  C+       
Sbjct: 573 KG--------------------------NMPINVF-----NKVGDRSTEIICKTLTSQQN 601

Query: 624 ----QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVY 679
                 +L  + VF +M +  +KPNVVTFSAILNACSRC+S ++AS+LLE++R FD+ VY
Sbjct: 602 ANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQMRFFDSWVY 661

Query: 680 GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEG 739
           G+AHGLLMG R+++WV+A  LFDE+  MD +T +AFYNALTD+LWHFGQ++GAQ VV+  
Sbjct: 662 GIAHGLLMGLREHVWVEAQRLFDEIARMDYATGAAFYNALTDVLWHFGQRQGAQEVVVAA 721

Query: 740 KRRQVWENVWSES----CLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGW 795
           KRRQVWEN W  S    CLDLHLMS GAA+AM+H WLL++ ++V++GH LP++LSILTGW
Sbjct: 722 KRRQVWENAWWRSEQQFCLDLHLMSVGAAQAMLHVWLLDLRALVWDGHALPRVLSILTGW 781

Query: 796 GKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLH 855
           GKHSKV G   ++RAVE  L  + APF V   N GR +  G +V +WL +  T K+L+L 
Sbjct: 782 GKHSKVAGFSTVKRAVESRLLEIKAPFQVGRYNEGRLVCAGHIVRAWLGDPRTSKLLMLQ 841

Query: 856 D 856
           D
Sbjct: 842 D 842


>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  845 bits (2182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/770 (53%), Positives = 549/770 (71%), Gaps = 31/770 (4%)

Query: 92  LAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDV-SLGDILKKFE 150
           L  +F GRRSTR VSK H GR K+ M  +HS  A+ A   + +     + S   +L+K+ 
Sbjct: 99  LNAEFCGRRSTRLVSKFHHGRQKLYMG-KHSPEADLAAQEILSAPSTPLNSTALLLEKWS 157

Query: 151 FKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVD 210
            +L G +D+ +LLRELGNRGEW +A+Q + + V++   +++  KLAS MIS LGRLGKV+
Sbjct: 158 HQLVGLEDFPYLLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGRLGKVE 217

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           +A ++F  A   G+GN VYA+SA++SAYGRSG C+EA+ VF +MK+   KPNL+TYN +I
Sbjct: 218 IALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTII 277

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           DACGKGGVD K  ++IFD+M + GV+PDRITFNSL+AVCSRGGLWE ++ +F EM  RGI
Sbjct: 278 DACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGI 337

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
           +QDIFT+NTL+DA+CKG QM+LA  IM  M  KNISPNVVTYSTMIDGY K G  ++A++
Sbjct: 338 EQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAIS 397

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           ++ +MK  G+  DRVSYNT++ IYAKLGRF++AL+ CK+ME  G++ D VTYNAL+  YG
Sbjct: 398 LYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYG 457

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           KQGKY +   +F++MK + + PN+LTYS LID YSK G++++   +F EFK+AGLK DVV
Sbjct: 458 KQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVV 517

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
           LYS+LID+ CK GLVE AV LL EMT+ GI+PN+VTYNS+IDA+GR    +         
Sbjct: 518 LYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQAD--------- 568

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
                    L+A+ +     VQ+ G    ++++        K    ++       +L  +
Sbjct: 569 --------KLEAVKANMPNSVQKIGERSMEVVR--------KPPPSQQNASDHTGVLAAV 612

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYR 690
            VF +M +  +KPNVVTFSAILNACSRC S ++AS+LLE++R FD  VYG+AHGLLMG R
Sbjct: 613 SVFHEMQQFGLKPNVVTFSAILNACSRCASLQEASVLLEQMRFFDGWVYGIAHGLLMGLR 672

Query: 691 DNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
           + +WV+A  LFDE+  MD +T +AFYNALTD+LWHFGQ++GAQ VV+  KRRQVWEN W 
Sbjct: 673 EQVWVEAQRLFDEISRMDYATGAAFYNALTDVLWHFGQRQGAQEVVVAAKRRQVWENAWW 732

Query: 751 ES----CLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGA 806
            S    CLDLHLMS GAA+AM+H WLL++ ++V++GH LP++LSILTGWGKHSKV G   
Sbjct: 733 RSEQQFCLDLHLMSVGAAQAMLHVWLLDLRALVWDGHALPRVLSILTGWGKHSKVAGVST 792

Query: 807 LRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHD 856
           ++RAVE+ L  + APF V   N GR +  G +V  WL +  T K+L+L D
Sbjct: 793 VKRAVELRLQEIKAPFQVGRYNEGRLVCAGHIVREWLGDPRTSKLLMLQD 842


>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Brachypodium distachyon]
          Length = 858

 Score =  803 bits (2073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/824 (51%), Positives = 561/824 (68%), Gaps = 43/824 (5%)

Query: 68  TSTTVAPNPKPFHSLSPLP----SSKSELAPDFSGRRSTRFVSKMH---FGRPKIAMSTR 120
           +S    P   P  S S  P      ++ L P+F   RST+ +SK +    G       T 
Sbjct: 64  SSAACPPVQNPIFSGSAAPWVVQPQRAALCPEFRRARSTKNISKRNNRGVGSQDRGGRT- 122

Query: 121 HSVVAEEALHHVTAFARDDV-SLGDILKKFEFKLCGADDYTFLLRELGNRGEWS-KAIQC 178
            SV A   +  +   A +D  +LG  L  F  +L   DDY  +LRELG+R + + +A++ 
Sbjct: 123 FSVAAGRCVDKLLRVAPEDRRALGASLSSFRGELVAPDDYCHILRELGDRDKSAIRALEV 182

Query: 179 FAFAVKREERKN-DQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISA 237
           F  A+      + D+GKL +A I  LG++ + DLA+  F+  +  GYGNTV+A SALISA
Sbjct: 183 FHAALPLVGNGSVDKGKLLTAAIGALGKMSRPDLARRAFDAGIAGGYGNTVFANSALISA 242

Query: 238 YGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP 297
           Y RSG   EA+ V  SMK   L+P  VTYNAVIDACGKGGVD +  +  F  MLR+ + P
Sbjct: 243 YARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDACGKGGVDLRFTLGYFRQMLRDRLCP 302

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
           DR TFNSLL+ CSR G  E AR LF+EM+H GI +DI+TYNT +DAICK   ++LA +++
Sbjct: 303 DRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVL 362

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
            +M AKN+ PNVVTYST+IDGY+K  + D+AL ++ +MK LGI LDRV YNTVL+IY K 
Sbjct: 363 LDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKA 422

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G++ E  +VC EME SGI KD VTYN+L+ GYGKQG+ D V  + + M+   V+P++LTY
Sbjct: 423 GKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTY 482

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           STLID+YSK G++ +A  ++ +FK++GLK DVVL+S+ ID L KNGLVE A+SLL++MT+
Sbjct: 483 STLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTE 542

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
            GI+PNVVTYN+IIDAFG+S                         + S++D +  E G  
Sbjct: 543 MGIKPNVVTYNTIIDAFGKS------------------------KVLSEEDPEAGEMGIV 578

Query: 598 ---DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
              + QII+    +   ++    +  R  QE+  IL +FQKM +  ++PNVVTFSAILNA
Sbjct: 579 GVYNGQIIRAANPVTRGRSAIDVRMRRS-QELYFILELFQKMVQQGVRPNVVTFSAILNA 637

Query: 655 CSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASA 714
           CSRCN+FEDA++LLE+LRLFDN VYGVA+GLLMGY++ IW QA SLF+++  MDS T+SA
Sbjct: 638 CSRCNNFEDAALLLEQLRLFDNFVYGVAYGLLMGYQE-IWSQAQSLFNQLGRMDSPTSSA 696

Query: 715 FYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLN 774
           FYNALTD+LWHFGQ++GAQLVVLEG  R+VW+N WSE CLDLHLMS GAA+AMVHAWLLN
Sbjct: 697 FYNALTDVLWHFGQRQGAQLVVLEGVNRRVWDNTWSEFCLDLHLMSCGAAQAMVHAWLLN 756

Query: 775 IHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFIS 834
           + SIVFEG  +P+ LSILTGWGKHSK+ G   LR  +E LL  +GAPF V   N+GRF+S
Sbjct: 757 VRSIVFEGRAMPEFLSILTGWGKHSKIAGASTLRHVIEALLNSIGAPFQVERFNIGRFVS 816

Query: 835 TGPMVASWLRESGTLKVLVLHDDRTHSENAGFDEML-NMQTLTL 877
              +VA+WLRESGT+ +L+L+D+R  +++A    ML  +Q L L
Sbjct: 817 PSAVVAAWLRESGTMNILLLNDER--AQHASPSSMLPRLQALQL 858


>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
          Length = 870

 Score =  789 bits (2038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/788 (51%), Positives = 535/788 (67%), Gaps = 45/788 (5%)

Query: 92  LAPDFSGRRSTRFVSK-MHFGRPKIAMSTRHSVVAEEALHHVTAFAR----DDVSLGDIL 146
           L P+F   R+T+ +SK    G        R  V +  A   V    R    D   LG  L
Sbjct: 101 LGPEFRRARTTKTISKRTRGGGGGGGAQDRGRVSSAAAGRCVEKLLRVAPEDRRGLGSAL 160

Query: 147 KKFEFKLCGADDYTFLLRELGNRGEWS-KAIQCFAFAVKREERKN-DQGKLASAMISILG 204
             F  +L G +DY  +LR LG+R + + +A + F  A+        D+GKL +A I  LG
Sbjct: 161 SSFRGELLGPEDYCQILRGLGDRDKSALRAFEVFYAALPLVGGGAVDKGKLLTAAIGALG 220

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++G+ DLA+  F+T +   YGNTV+A SALISAY RSG   EA+ V  SMK   L+P  V
Sbjct: 221 KMGRPDLARRAFDTGIAGSYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTV 280

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           +YNAVIDACGKGGVD +  +  F  ML++G+ PDR TFNSLLA CSR G  E AR +F+E
Sbjct: 281 SYNAVIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDE 340

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+H G  +DI+TYNT +DAICK   M LA +++ +M A N  PNVVTYST++DG++K  +
Sbjct: 341 MIHLGSGRDIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEK 400

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
            D+AL +  +MK L I LDRV YNT+L+IY K G+++E   VC+EME  GI KD VTYN+
Sbjct: 401 YDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNS 460

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ GYGKQG+ D V  + + M+A  V+P++LTYSTLID+YSK G++ +A  ++ +FK++G
Sbjct: 461 LINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESG 520

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           LKADVVL+S+ ID L KNGLVE A+SLLDEM K GI+PNVVTYN+IIDAFG+S       
Sbjct: 521 LKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIIDAFGKS------- 573

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE------KAGQGKK 618
                             + +++D D+ + G     I+ V+G  V        + G+   
Sbjct: 574 -----------------KIFTEEDSDIGDMG-----IVGVYGGQVVRVTNPVIRGGRSAT 611

Query: 619 ENRCR--QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
           + R R  QE+  IL +FQKM +  ++PNVVTFSAILNACSRCNSFEDA++LLE+LRLFDN
Sbjct: 612 DVRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNSFEDAALLLEQLRLFDN 671

Query: 677 QVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVV 736
            VYGVA+GLLMG+R+  W QA SLF+++  MDS T+SAFYNALTD+LWHFGQ++GAQ VV
Sbjct: 672 SVYGVAYGLLMGHRE-AWSQARSLFNQLGRMDSPTSSAFYNALTDVLWHFGQRQGAQQVV 730

Query: 737 LEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWG 796
           LEG  R+VWEN W + CLDLHLMS GAA+AMVHAWLLN+ SIVFEG  +P+ LSILTGWG
Sbjct: 731 LEGVNRRVWENTWGDFCLDLHLMSCGAAQAMVHAWLLNVRSIVFEGRAMPEFLSILTGWG 790

Query: 797 KHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHD 856
           KHSKV G   LRR +E LL  +GAPF     N+GRF+S   +V++WLRESGT+ +L+L +
Sbjct: 791 KHSKVAGSSTLRRVIEALLLSIGAPFQAERFNIGRFVSPSALVSAWLRESGTINILLLRN 850

Query: 857 DRTHSENA 864
           +RT   NA
Sbjct: 851 ERTQHANA 858


>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
 gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
          Length = 647

 Score =  750 bits (1936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/660 (55%), Positives = 479/660 (72%), Gaps = 28/660 (4%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           +G+ DLA+  F++ + + YGNTV+A SALISAY RSG   EA+ V  SMK   L+P  V+
Sbjct: 1   MGRPDLARRAFDSGIADRYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVS 60

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           YNAVIDACGKGGVD +  +  F  ML++G+ PDR TFNSLLA CSR G  E AR +F+EM
Sbjct: 61  YNAVIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEM 120

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           +H G  +DI+TYNT +DAICK   M+LA +++ +M A NI PNVVTYST++DG++K  + 
Sbjct: 121 IHLGSGRDIYTYNTFVDAICKCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKY 180

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D+AL +  +MK LGI LDRV YNT+L+IY K G+++E   VC++ME+ GI KD VTYN+L
Sbjct: 181 DEALKLREKMKSLGIQLDRVCYNTLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSL 240

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + GYGKQG+ D V  + + M+A  V+P++LTYSTLID+YSK G++ +A  ++ +FK++GL
Sbjct: 241 INGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGL 300

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           KADVVL+S+ ID L KNGLVE A+SLLDEM K GI+PNVVTYN+IIDAFG+S        
Sbjct: 301 KADVVLFSSFIDTLAKNGLVECALSLLDEMIKMGIKPNVVTYNTIIDAFGKSKI------ 354

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR-- 623
                            +  +D  ++   G    QI++    +   + G+   + R R  
Sbjct: 355 -----------------LTEEDPGNMGIVGVYGGQIVRATNPVT--RGGRSATDVRMRRS 395

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH 683
           QE+  IL +FQKM +  ++PNVVTFSAILNACSRCN+FEDA++LLE+LRLFDN VYGVA+
Sbjct: 396 QELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQLRLFDNSVYGVAY 455

Query: 684 GLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQ 743
           GLLMG+ +  W QA SLF+++  MDS T+SAFYNALTD+LWHFGQ++GAQ VVLEG  R+
Sbjct: 456 GLLMGHLE-AWSQARSLFNQLGRMDSPTSSAFYNALTDVLWHFGQRQGAQQVVLEGVNRR 514

Query: 744 VWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVG 803
           VWEN W + CLDLHLMS GAA+AMVHAWLLN+ SIVFEG  +P+ LSILTGWGKHSK+ G
Sbjct: 515 VWENTWGDFCLDLHLMSCGAAQAMVHAWLLNVRSIVFEGRAMPEFLSILTGWGKHSKIAG 574

Query: 804 DGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDDRTHSEN 863
              LRR +E LL  +GAPF V   N+GRF+S   +VA+WLRESGT+ +L+L ++R    N
Sbjct: 575 SSTLRRVIEALLLSIGAPFQVERFNIGRFVSPSALVAAWLRESGTVNILLLRNERVQHAN 634



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 191/352 (54%), Gaps = 13/352 (3%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           K  +++++   R G ++ A+ +F+  ++ G G  +Y ++  + A  + G  + A  V   
Sbjct: 95  KTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELATQVVLD 154

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           M+  N+KPN+VTY+ ++D   K    +   +++ + M   G+Q DR+ +N+LLA+  + G
Sbjct: 155 MEANNIKPNVVTYSTLMDGFSKLE-KYDEALKLREKMKSLGIQLDRVCYNTLLAIYVKTG 213

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            ++    +  +M + GI++D  TYN+L++   K  ++D+   ++ +M A+ ++P+V+TYS
Sbjct: 214 KYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYS 273

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+ID Y+KAG   DA N++ + K  G+  D V +++ +   AK G  E AL +  EM   
Sbjct: 274 TLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKM 333

Query: 434 GIRKDAVTYNALLGGYGKQGKYDE-------VRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
           GI+ + VTYN ++  +GK     E       +  ++        +P      +  DV  +
Sbjct: 334 GIKPNVVTYNTIIDAFGKSKILTEEDPGNMGIVGVYGGQIVRATNPVTRGGRSATDVRMR 393

Query: 487 GGLYKE---AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
               +E    +++F++  Q G++ +VV +SA+++A  +    E A  LL+++
Sbjct: 394 RS--QELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQL 443



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 44/181 (24%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I I  + G    A N++      G    V  FS+ I    ++G  + A+S+ + M +
Sbjct: 273 STLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIK 332

Query: 257 YNLKPNLVTYNAVIDACGKGGV-------------------------------------- 278
             +KPN+VTYN +IDA GK  +                                      
Sbjct: 333 MGIKPNVVTYNTIIDAFGKSKILTEEDPGNMGIVGVYGGQIVRATNPVTRGGRSATDVRM 392

Query: 279 ----DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
               +   ++E+F  M++ GV+P+ +TF+++L  CSR   +E A  L  ++  R  D  +
Sbjct: 393 RRSQELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQL--RLFDNSV 450

Query: 335 F 335
           +
Sbjct: 451 Y 451


>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
          Length = 607

 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/621 (55%), Positives = 446/621 (71%), Gaps = 38/621 (6%)

Query: 248 ISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA 307
           + V  SMK   L+P  V+YNAVIDACGKGGVD +  +  F  ML++G+ PDR TFNSLLA
Sbjct: 1   MGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLA 60

Query: 308 VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
            CSR G  E AR +F+EM+H GI +DI+TYNT +DAICK   M+LA +++ +M AK + P
Sbjct: 61  ACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKP 120

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           NVVTYST+IDGY+K  + ++AL +  +MK + I LDRV YNT+L+IY K G++ E   VC
Sbjct: 121 NVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVC 180

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
            EME  GI KD VTYN+L+ GYGKQG+ D V  + + M+   V+P++LTYSTLID+YSK 
Sbjct: 181 DEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKA 240

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G++ +A  ++ +FK++GLK DVVL+S+ ID L KNGL+E A+SLL++MT+ GI+PNVVTY
Sbjct: 241 GMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTY 300

Query: 548 NSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF-G 606
           N+IIDAFG+S                            +DD +V + G     I+ V+ G
Sbjct: 301 NAIIDAFGKSKVM------------------------MEDDSEVGDMG-----IVGVYGG 331

Query: 607 QLV-----AEKAGQGKKENRCR--QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
           Q+V       + G+   + R R  QE+  IL +FQKM +  ++PNVVTFSAILNACSRCN
Sbjct: 332 QIVRVANPVSRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILNACSRCN 391

Query: 660 SFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
           SFEDA++LLE+LRLFDN VYGVA+GLL+G R+ +W QA SLF+++  MDS T+SAFYNAL
Sbjct: 392 SFEDAALLLEQLRLFDNFVYGVAYGLLVGSRE-VWSQAQSLFNQLGRMDSPTSSAFYNAL 450

Query: 720 TDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIV 779
           TD+LWHFGQ+R AQ VV EG  R+VWEN W E CLDLHLMS GAA+AMVHAWLLN+ SIV
Sbjct: 451 TDVLWHFGQRRKAQQVVFEGINRRVWENTWGEFCLDLHLMSCGAAQAMVHAWLLNVRSIV 510

Query: 780 FEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMV 839
           FEG  +P+ LSILTGWGKHS++ G   LRR +E LL  +GAPF V   N+GRF+S   +V
Sbjct: 511 FEGRAMPEFLSILTGWGKHSRIAGASTLRRVIEALLNSIGAPFQVERFNIGRFVSPSAVV 570

Query: 840 ASWLRESGTLKVLVLHDDRTH 860
           A+WLRESGT  +L+LHD+R  
Sbjct: 571 AAWLRESGTFNILLLHDERVQ 591



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 199/368 (54%), Gaps = 26/368 (7%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           K  +++++   R+G ++ A+ +F+  ++ G G  +Y ++  I A  + G  + A+ V   
Sbjct: 53  KTFNSLLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLD 112

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           M+   +KPN+VTY+ +ID   K    ++  +++ + M    +Q DR+ +N+LLA+  + G
Sbjct: 113 MEAKGVKPNVVTYSTLIDGYSKLE-KYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAG 171

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            +    N+ +EM   GI++D  TYN+L++   K  ++D+   ++ +M  + ++P+V+TYS
Sbjct: 172 KYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYS 231

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+ID Y+KAG   DA N++ + K  G+  D V +++ +   AK G  E AL +  +M   
Sbjct: 232 TLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEM 291

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI+ + VTYNA++  +GK             M+ D    ++     ++ VY  G + + A
Sbjct: 292 GIKPNVVTYNAIIDAFGKSKV---------MMEDDSEVGDM----GIVGVYG-GQIVRVA 337

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             + R  + A    DV +         ++  +   + L  +M ++G+RPNVVT+++I++A
Sbjct: 338 NPVSRGGRSA---TDVRMR--------RSQELFFILELFQKMVQQGVRPNVVTFSAILNA 386

Query: 554 FGRSATTE 561
             R  + E
Sbjct: 387 CSRCNSFE 394


>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
 gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
          Length = 759

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/779 (45%), Positives = 473/779 (60%), Gaps = 52/779 (6%)

Query: 92  LAPDFSGRRSTRFVSKM-HFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFE 150
           L  DF GR+STR VSK+ H GRP  A       V   A+ H+       + +  +L +  
Sbjct: 19  LGSDFCGRKSTRLVSKLSHLGRPSSAPGKPIKPVLSSAVKHMIKSPSPSL-MPALLDQVS 77

Query: 151 FKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVD 210
             L G DD  F++RELG+ G+W K ++ F + V ++  ++   K+ S +IS LGRLG+ D
Sbjct: 78  AHLLGPDDLPFIVRELGHSGQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSD 137

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
            A+ IF+ A+  G+GN V+ +S+LI AYGRSG   +A+ +F +MK    KPNLV YNAVI
Sbjct: 138 WAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVI 196

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           DAC KGG D+   + IF +ML  G+ PDRITFN+L++   R   WE    +F EM  RGI
Sbjct: 197 DACSKGG-DYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGI 255

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMP-AKNISPNVVTYSTMIDGYAKAGRLDDAL 389
            +D  TYNTL+   C+G QM L   +M  M  +  I P+V+TYSTMIDGYAK G   +A+
Sbjct: 256 ARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAI 315

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            +F EM+   +  D + YNT++ I+A+LG F+EA  + + ME +G  KD VTYNALL  Y
Sbjct: 316 ALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSY 375

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
           GKQGK+ E   + E+MK    SPN+LTYS LID Y K G +++AM +F++ K+AGL+ DV
Sbjct: 376 GKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDV 435

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           VLYS L+D  CKNG  + A++LL+EM   GIRPNV+TYNS++DA+GR    +C +  V +
Sbjct: 436 VLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGR----QCLM--VRK 489

Query: 570 DLGKQK-----ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
              K +         L     QDD+                  LV  K  Q         
Sbjct: 490 TFPKLRFFLLPRVTMLLKPSMQDDQQ----------------SLVDPKQKQAL------- 526

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG 684
            +L    VF++M K  +KPNVVTFS+ILNACS C S EDAS LLE +R+FD +VYGV HG
Sbjct: 527 -VLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAMRVFDGRVYGVTHG 585

Query: 685 LLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQV 744
           LLMG+R  +W  A +LF+E+  +  +TA AFYNALTD+LWHF Q + A       K R V
Sbjct: 586 LLMGFRIRVWRDAETLFNELTTLGHNTAVAFYNALTDVLWHFEQAQAA-------KDRHV 638

Query: 745 WENVWSES----CLDLHLMSSGAARAMVHAWLLNIHSIVFEGHE-LPKLLSILTGWGKHS 799
           W+  W  S     LDLH MS G+A+AM+H WLL I   + +    LPK +SILTGWGKHS
Sbjct: 639 WDKAWWHSEQQFFLDLHFMSVGSAQAMLHLWLLYIRKFLCQRRSVLPKYMSILTGWGKHS 698

Query: 800 KVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDDR 858
           KV G+ A++RAVE  L  M +PF V   N GR +  G  V  WL ++ T + L L D R
Sbjct: 699 KVPGESAVKRAVEAHLLEMNSPFHVWGNNEGRLVCAGYQVQGWLMDTRTQRHLRLCDVR 757


>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
 gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
          Length = 760

 Score =  640 bits (1650), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 351/774 (45%), Positives = 476/774 (61%), Gaps = 42/774 (5%)

Query: 92  LAPDFSGRRSTRFVSKM-HFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFE 150
           L  DF GR+STR VSK+ H GRP  A       V   A+ H+       + +  +L +  
Sbjct: 20  LGTDFCGRKSTRLVSKLSHLGRPSSAPGKPIKPVLSSAVKHMIKSPSPSL-MPALLDQVS 78

Query: 151 FKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVD 210
             L G DD  F++RELG+ G+W K ++ F + V ++  ++   K+ S +IS LGRLG+ D
Sbjct: 79  AHLLGPDDLPFIVRELGHSGQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSD 138

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
            A+ IF+ A+  G+GN V+ +S+LI AYGRSG   +A+ +F +MK    KPNLV YNAVI
Sbjct: 139 WAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVI 197

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           DAC KGG D+   + IF +ML  G+ PDRITFN+L++   R   WE    +F EM  RGI
Sbjct: 198 DACSKGG-DYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGI 256

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMP-AKNISPNVVTYSTMIDGYAKAGRLDDAL 389
            +D  TYNTL+   C+G QM L   +M  M  +  I P+V+TYSTMIDGYAK G   +A+
Sbjct: 257 ARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAI 316

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            +F EM+   +  D + YNT++ I+A+LG F+EA  + + ME +G  KD VTYNALL  Y
Sbjct: 317 ALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSY 376

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
           GKQGK+ E   + E+MK    SPN+LTYS LID Y K G +++AM +F++ K+AGL+ DV
Sbjct: 377 GKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDV 436

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           VLYS L+D  CKNG  + A++LL+EM   GIRPNV+TYNS++DA+GR    +C +  V +
Sbjct: 437 VLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGR----QCLM--VRK 490

Query: 570 DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI 629
           +  K +       +  +    ++ +   D Q       LV  K  Q          +L  
Sbjct: 491 NFPKLRF-----FLLPRVTMLLKPSVDYDQQ------SLVDPKQKQAL--------VLAA 531

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY 689
             VF++M K  +KPNVVTFS+ILNACS C S EDAS LLE +R+FD +VYGV HGLLMG+
Sbjct: 532 ARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASSLLEAMRVFDGRVYGVTHGLLMGF 591

Query: 690 RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVW 749
           R  +W  A +LF+E+  +  +TA AFYNALTD+LWHF Q + A       K R VW+  W
Sbjct: 592 RIRVWRDAETLFNELTTLGHNTAVAFYNALTDVLWHFEQAKAA-------KDRHVWDKAW 644

Query: 750 SES----CLDLHLMSSGAARAMVHAWLLNIHSIVFEGHE-LPKLLSILTGWGKHSKVVGD 804
             S     LDLH MS G+A+AM+H WLL I   + +    LPK +SILTGWGKHSKV G+
Sbjct: 645 WHSEQQFFLDLHFMSVGSAQAMLHLWLLYIRKFLCQRRSVLPKYMSILTGWGKHSKVPGE 704

Query: 805 GALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDDR 858
            A++RAVE  L  M +PF V   N GR +  G  V  WL ++ T + L L D R
Sbjct: 705 SAVKRAVEAHLLEMNSPFHVWGNNEGRLVCAGYQVQGWLMDTRTQRHLRLCDVR 758


>gi|224130972|ref|XP_002320970.1| predicted protein [Populus trichocarpa]
 gi|222861743|gb|EEE99285.1| predicted protein [Populus trichocarpa]
          Length = 249

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 217/249 (87%), Positives = 229/249 (91%)

Query: 626 ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGL 685
           ++CIL VF KMH+L+IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGL
Sbjct: 1   MMCILAVFHKMHELEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGL 60

Query: 686 LMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVW 745
           LMGYR+N+W QA SLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVW
Sbjct: 61  LMGYRENVWEQAQSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVW 120

Query: 746 ENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDG 805
           ENVWSESCLDLHLMSSGAARAMVHAWLLNI SIVFEGHELPKLLSILTGWGKHSKVVGD 
Sbjct: 121 ENVWSESCLDLHLMSSGAARAMVHAWLLNIRSIVFEGHELPKLLSILTGWGKHSKVVGDS 180

Query: 806 ALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDDRTHSENAG 865
            LRRA+E LL GMGAPF +A CNLGRFISTG +VA+WLRESGTLKVLVLHD RT  EN  
Sbjct: 181 TLRRAIEALLMGMGAPFRLAKCNLGRFISTGSVVAAWLRESGTLKVLVLHDHRTEQENLR 240

Query: 866 FDEMLNMQT 874
           F +  N+QT
Sbjct: 241 FGQASNLQT 249



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 3/128 (2%)

Query: 248 ISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA 307
           ++VF+ M    +KPN+VT++A+++AC +    F+    + +++     Q   +    L+ 
Sbjct: 5   LAVFHKMHELEIKPNVVTFSAILNACSRCN-SFEDASMLLEELRLFDNQVYGVAHGLLMG 63

Query: 308 VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
              R  +WE A++LF+E+           YN L D +    Q   A  ++ E   + +  
Sbjct: 64  Y--RENVWEQAQSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWE 121

Query: 368 NVVTYSTM 375
           NV + S +
Sbjct: 122 NVWSESCL 129


>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 779

 Score =  350 bits (899), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 240/758 (31%), Positives = 390/758 (51%), Gaps = 52/758 (6%)

Query: 117 MSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAI 176
           M  ++S   E A++++T+ A    S+   ++ +  KL   +D++ + RE   R +W KA+
Sbjct: 1   MKGKYSYDVENAINNLTSLAPRG-SIAKTMEGYRNKLT-INDFSLIFREFAQRSDWQKAL 58

Query: 177 QCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE-TALNEGYGNTVYAFSALI 235
           + F +  + +  K ++  + + MI I+GR G +D A  +FE   LN+   N VY+F+ALI
Sbjct: 59  RLFKYMQRHQWCKPNE-HVYTIMIGIMGREGMLDKASELFEDMPLNDVEWN-VYSFTALI 116

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV 295
           +AYGR+G  + ++ +   MKR  + PNL+TYN VI+AC KGG++++ ++ +F  M   G+
Sbjct: 117 NAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGI 176

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           QPD IT+N+LL+ CS  GL E A  +F  M   G+  D  TYN L+D   +  + +   E
Sbjct: 177 QPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGE 236

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++ EM     +P+VV Y+ +I+ Y +AG+   A  MF +M+  G   D V+++T+L  Y 
Sbjct: 237 LLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYG 296

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K G ++E  L+  +M+  G   D  TYN L+  +G+ G + E   +F  +    V P++ 
Sbjct: 297 KHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMS 356

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY+ L+    KGGL+K A +I R   Q+ +      ++ LI A     L   A    + M
Sbjct: 357 TYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSM 416

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
            + G +P++ TYN++I A                 L  +  SA L  +    D+ +    
Sbjct: 417 KESGCKPDLETYNALIGAHAGGG------------LYCEAGSAYLTMI----DEGISADV 460

Query: 596 RTDNQIIKVFGQLV----AEKAGQGKKENRCRQE---------ILCILGVFQ--KMHKLK 640
            T N +I+ FG+      A +  +  +E RC            + C  G+F   K   L 
Sbjct: 461 STYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEAKAQFLD 520

Query: 641 IK-----PNVVTFSAILNACSRCNSFEDASMLLEELRLFDN--QVYGVAHGLLMGYRDN- 692
           ++     P+V ++  +L+ C+R N ++DAS +LEE+ L  N   +YGV  G+L G  D+ 
Sbjct: 521 LQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEM-LEPNMPSIYGVVGGILKGEMDDG 579

Query: 693 -IWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSE 751
             W +    FD +K+    +   FYNAL + LW  GQ+  A  V  E ++R V    +S 
Sbjct: 580 TNWQRVEYAFDGLKVDGVGSNLRFYNALLEALWCLGQRERACRVFAEARKRGVLAEAFSR 639

Query: 752 S----CLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGAL 807
           S     +D+H MS GAA   +  WL ++ + +      P LLSI+T WG         +L
Sbjct: 640 SDLMWAIDVHRMSVGAAMTTLIVWLADMKAEIDNKSTFPPLLSIVTKWGDKDPNRDLKSL 699

Query: 808 RRAVEVL--LTGMGAPFWVANCNLGRFISTGPMVASWL 843
             A  +L  L  +GAPF  A  N GR I+  P++  WL
Sbjct: 700 PAARAILGGLAAIGAPFDFAEWNEGRIITWAPVLQKWL 737


>gi|115489080|ref|NP_001067027.1| Os12g0562300 [Oryza sativa Japonica Group]
 gi|113649534|dbj|BAF30046.1| Os12g0562300, partial [Oryza sativa Japonica Group]
          Length = 306

 Score =  345 bits (885), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 176/320 (55%), Positives = 221/320 (69%), Gaps = 38/320 (11%)

Query: 549 SIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG-Q 607
           +IIDAFG+S                            +DD +V + G     I+ V+G Q
Sbjct: 1   AIIDAFGKSKVM------------------------MEDDSEVGDMG-----IVGVYGGQ 31

Query: 608 LV-----AEKAGQGKKENRCR--QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           +V       + G+   + R R  QE+  IL +FQKM +  ++PNVVTFSAILNACSRCNS
Sbjct: 32  IVRVANPVSRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNS 91

Query: 661 FEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALT 720
           FEDA++LLE+LRLFDN VYGVA+GLL+G R+ +W QA SLF+++  MDS T+SAFYNALT
Sbjct: 92  FEDAALLLEQLRLFDNFVYGVAYGLLVGSRE-VWSQAQSLFNQLGRMDSPTSSAFYNALT 150

Query: 721 DMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVF 780
           D+LWHFGQ+R AQ VV EG  R+VWEN W E CLDLHLMS GAA+AMVHAWLLN+ SIVF
Sbjct: 151 DVLWHFGQRRKAQQVVFEGINRRVWENTWGEFCLDLHLMSCGAAQAMVHAWLLNVRSIVF 210

Query: 781 EGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVA 840
           EG  +P+ LSILTGWGKHS++ G   LRR +E LL  +GAPF V   N+GRF+S   +VA
Sbjct: 211 EGRAMPEFLSILTGWGKHSRIAGASTLRRVIEALLNSIGAPFQVERFNIGRFVSPSAVVA 270

Query: 841 SWLRESGTLKVLVLHDDRTH 860
           +WLRESGT  +L+LHD+R  
Sbjct: 271 AWLRESGTFNILLLHDERVQ 290


>gi|108862824|gb|ABA98950.2| expressed protein [Oryza sativa Japonica Group]
          Length = 295

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 169/283 (59%), Positives = 212/283 (74%), Gaps = 14/283 (4%)

Query: 586 QDDKDVQEAGRTDNQIIKVFG-QLV-----AEKAGQGKKENRCR--QEILCILGVFQKMH 637
           +DD +V + G     I+ V+G Q+V       + G+   + R R  QE+  IL +FQKM 
Sbjct: 3   EDDSEVGDMG-----IVGVYGGQIVRVANPVSRGGRSATDVRMRRSQELFFILELFQKMV 57

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQA 697
           +  ++PNVVTFSAILNACSRCNSFEDA++LLE+LRLFDN VYGVA+GLL+G R+ +W QA
Sbjct: 58  QQGVRPNVVTFSAILNACSRCNSFEDAALLLEQLRLFDNFVYGVAYGLLVGSRE-VWSQA 116

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLH 757
            SLF+++  MDS T+SAFYNALTD+LWHFGQ+R AQ VV EG  R+VWEN W E CLDLH
Sbjct: 117 QSLFNQLGRMDSPTSSAFYNALTDVLWHFGQRRKAQQVVFEGINRRVWENTWGEFCLDLH 176

Query: 758 LMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTG 817
           LMS GAA+AMVHAWLLN+ SIVFEG  +P+ LSILTGWGKHS++ G   LRR +E LL  
Sbjct: 177 LMSCGAAQAMVHAWLLNVRSIVFEGRAMPEFLSILTGWGKHSRIAGASTLRRVIEALLNS 236

Query: 818 MGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDDRTH 860
           +GAPF V   N+GRF+S   +VA+WLRESGT  +L+LHD+R  
Sbjct: 237 IGAPFQVERFNIGRFVSPSAVVAAWLRESGTFNILLLHDERVQ 279


>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Glycine max]
          Length = 859

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 215/789 (27%), Positives = 397/789 (50%), Gaps = 39/789 (4%)

Query: 74  PNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEA----- 128
           P+P PF SL+P  + +     +F+     R   +   G+P + +    SV  E+      
Sbjct: 12  PHPSPF-SLTPTTTLRQLFFTNFTPSPRRRLQLQARAGKPNVLIPINPSVAVEKGKYSYD 70

Query: 129 ----LHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVK 184
               ++ +TA      S+   L  F+ KL   +D+  + +E   RG+W ++++ F + ++
Sbjct: 71  VETLINRITALPPRG-SIARCLDPFKNKL-SLNDFALVFKEFAQRGDWQRSLRLFKY-MQ 127

Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
           R+        + + MI++LGR G +D  + +F+   + G   TVY ++A+I+AYGR+G  
Sbjct: 128 RQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQF 187

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
             ++ + N MK+  + P+++TYN VI+AC +GG+D++ ++ +F +M   G+QPD IT+N+
Sbjct: 188 HASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNT 247

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           LL  C+  GL + A  +F  M   GI  DI TY+ L+    K  +++   E++ EM +  
Sbjct: 248 LLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGG 307

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
             P++ +Y+ +++ YA+ G + +A+++F +M+  G   +  +Y+ +L++Y K GR+++  
Sbjct: 308 NLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVR 367

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +  EM+ S    DA TYN L+  +G+ G + EV  +F  M  + V PN+ TY  LI   
Sbjct: 368 DIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFAC 427

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            KGGLY++A +I     + G+      Y+ +I+A  +  L E A+ + + M + G  P V
Sbjct: 428 GKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTV 487

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD--KDVQEAGRTDNQII 602
            TYNS I AF R    +    + E  L +  ES     + S +   K  ++ G+ + + +
Sbjct: 488 ETYNSFIHAFARGGLYK----EAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYE-EAV 542

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCILGV-------FQKMHKLKIKPNVVTFSAILNAC 655
           K + ++        +        + C  G+       FQ++    I P+V+ +  +L   
Sbjct: 543 KSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALY 602

Query: 656 SRCNSFEDASMLLEE---LRLFDNQVYGVAHGLLMGYRDNI-WVQALSLFDEVKLMDSST 711
           ++ +   DA  L++E   +R+ D    G+   +   + D   W     +FD++       
Sbjct: 603 AKNDRLNDAYNLIDEMITMRVSDIH-QGIGQMIKGDFDDESNWQIVEYVFDKLNSEGCGL 661

Query: 712 ASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL----DLHLMSSGAARAM 767
              FYNAL + LW   Q+  A  V+ E  +R ++  ++ +S L    D+H MS G A   
Sbjct: 662 GMRFYNALLEALWWMFQRERAARVLNEASKRGLFPELFRKSKLVWSVDVHRMSEGGALTA 721

Query: 768 VHAWLLNIHSIVFEGHELPKLLSILTGWG---KHSKVVGDGALRRAVEVLLTGMGAPFWV 824
           +  WL N+H +   G++LP+L +++   G   K ++       + A+  L   + + F  
Sbjct: 722 LSVWLNNMHEMSRTGNDLPELATVVVVRGHMEKSTEAQDFPIAKAAISFLQDNVPSSFTF 781

Query: 825 ANCNLGRFI 833
              N GR +
Sbjct: 782 PGWNKGRIV 790


>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic [Vitis vinifera]
          Length = 869

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 214/795 (26%), Positives = 405/795 (50%), Gaps = 52/795 (6%)

Query: 77  KPFH-SLSPLPSSKSELAP----DFSGRR-----STRFVSK---MHFGRPKIAMST-RHS 122
           +P H +L P P+    L P    DF G +     + R  +K   +  G P + +   ++S
Sbjct: 19  RPSHVNLRPNPNLNRHLFPAKATDFFGYQRILASAARIRAKPKELVLGNPSVTVEKGKYS 78

Query: 123 VVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFA 182
              E  ++ +++      S+   L  F+ KL   +D+  + +E   RG+W ++++ F + 
Sbjct: 79  YDVETLINKLSSLPPRG-SIARCLDVFKNKL-SLNDFALVFKEFAQRGDWQRSLRLFKY- 135

Query: 183 VKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSG 242
           ++R+        + + MI +LGR G ++  + IF+   + G   +V++F+ALI+AYGR+G
Sbjct: 136 MQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNG 195

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
             + ++ + + MK+  + P+++TYN VI++C +GG+D++ ++ +F  M   G+Q D +T+
Sbjct: 196 QYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTY 255

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           N+LL+ C+R GL + A  +F  M   GI  DI TY+ L++   K  +++   E++ EM +
Sbjct: 256 NTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMES 315

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
               P++ +Y+ +++ +A++G + +A+ +F +M+  G   +  +Y+ +L++Y + GR+++
Sbjct: 316 GGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDD 375

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
              +  EM+ S    +A TYN L+  +G+ G + EV  +F  M  + V PN+ TY  LI 
Sbjct: 376 VRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIF 435

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
              KGGL+++A +I     + G+      Y+ +I+A  +  L E A+   + M + G +P
Sbjct: 436 ACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKP 495

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI- 601
            V TYNS+I  F +    + + + +   +G+   + N D         V EA R   Q  
Sbjct: 496 TVETYNSLIQMFAKGGLYKES-EAILLKMGQSGVARNRDTF-----NGVIEAFRQGGQFE 549

Query: 602 --IKVFGQLVAEKAGQGKKENRCRQEILCILGV-------FQKMHKLKIKPNVVTFSAIL 652
             IK + ++   +    ++       + C  G+       F ++  L I P+V+ +  +L
Sbjct: 550 EAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMML 609

Query: 653 NACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYR-----DNIWVQALSLFDEVKLM 707
              ++ + ++DA  LL+E  +F N+V  +   +    R     D+ W     +F+++K  
Sbjct: 610 AVYAKADRWDDAHQLLDE--MFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSE 667

Query: 708 DSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN-------VWSESCLDLHLMS 760
             S    FYN L + LW  GQK  A  V+ E  +R ++         VWS   +D+H M 
Sbjct: 668 GCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRGLFPELFRKNKLVWS---VDVHRMW 724

Query: 761 SGAARAMVHAWLLNIHSIVFEGHELPKLLS--ILTGWGKHSKVVGDGALRRAVEVLLTGM 818
            GAA   +  WL N+H +   G +LP+L S  ++ G  + S +  D  + ++    L  +
Sbjct: 725 EGAACTAISVWLNNMHEMFISGDDLPQLASAVVVRGHMEKSSITRDFPVAKSAYAFLNEV 784

Query: 819 GAPFWVANCNLGRFI 833
            + F     N GR +
Sbjct: 785 SSSFCFPGWNKGRIV 799


>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Glycine max]
          Length = 857

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 220/800 (27%), Positives = 395/800 (49%), Gaps = 44/800 (5%)

Query: 65  PAATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVV 124
           P   + T++P       L+P  + +  L  +F+     R + +    +P + +    SV 
Sbjct: 2   PLKMTLTLSPFSPTL--LTPATTLRQLLFTNFTPSPKRRLLLQARAAKPNVLIPINPSVT 59

Query: 125 AEEA---------LHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKA 175
            E+          ++ +TA      S+   L  F+ KL   +D+  + +E   RG+W ++
Sbjct: 60  VEKGKYSYDVETLINRLTALPPRG-SIARCLDPFKNKL-SLNDFALVFKEFAQRGDWQRS 117

Query: 176 IQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALI 235
           ++ F + ++R+        + + MI++LGR G +D  + +F+   + G   TVY+++A+I
Sbjct: 118 LRLFKY-MQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAII 176

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV 295
           +AYGR+G    ++ + N MK+  + P+++TYN VI+AC +GG+D++ ++ +F +M   G+
Sbjct: 177 NAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 236

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           QPD IT+N+LL  C+  GL + A  +F  M   GI  DI TY+ L+    K  +++   E
Sbjct: 237 QPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSE 296

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++ EM      P++ +Y+ +++ YA+ G + +A+ +F +M+  G   +  +Y+ +L++Y 
Sbjct: 297 LLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYG 356

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K GR+++   +  EM+ S    DA TYN L+  +G+ G + EV  +F  M  + V PN+ 
Sbjct: 357 KHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQ 416

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY  LI    KGGLY++A +I     + G+      Y+ +I+A  +  L E A+ + + M
Sbjct: 417 TYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTM 476

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
            + G  P V TYNS+I AF R    +    + E  L +  ES     + S +   V EA 
Sbjct: 477 NEVGSNPTVETYNSLIHAFARGGLYK----EAEAILSRMNESGLKRDVHSFN--GVIEAF 530

Query: 596 RTDNQIIKVFGQLVA-EKAGQGKKENRCRQ--EILCILGV-------FQKMHKLKIKPNV 645
           R   Q  +     V  EKA     E        I C  G+       FQ++    I P+V
Sbjct: 531 RQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSV 590

Query: 646 VTFSAILNACSRCNSFEDASMLLE---ELRLFDNQVYGVAHGLLMGYRDNI--WVQALSL 700
           + +  +L   ++ +   DA  L++    +R+ D  ++ V   ++ G  D+   W     +
Sbjct: 591 MCYCMMLALYAKNDRLNDAYNLIDAMITMRVSD--IHQVIGQMIKGDFDDESNWQIVEYV 648

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL----DL 756
           FD++          FYNAL + LW   Q+  A  V+ E  +R ++  ++ +S L    D+
Sbjct: 649 FDKLNSEGCGLGMRFYNALLEALWCMFQRERAARVLNEASKRGLFPELFRKSKLVWSVDV 708

Query: 757 HLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGAL---RRAVEV 813
           H MS G A   +  WL N+H +   G +LP++ +++   G   K          + A+  
Sbjct: 709 HRMSEGGALTALSVWLNNVHEMSMTGDDLPEVATVVVVRGHMEKTTDAQDFPIAKAAISF 768

Query: 814 LLTGMGAPFWVANCNLGRFI 833
           L   + + F     N GR +
Sbjct: 769 LQDNVPSSFAFPGWNKGRIV 788


>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
 gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
          Length = 866

 Score =  312 bits (800), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 199/711 (27%), Positives = 367/711 (51%), Gaps = 26/711 (3%)

Query: 141 SLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMI 200
           S+   L  F+ KL   +D+  + +E   RG+W ++++ F   ++R+        + + MI
Sbjct: 93  SIARCLDVFKNKLS-LNDFALVFKEFAQRGDWQRSLRLFKH-MQRQIWCKPNEHIYTIMI 150

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           S+LGR G ++   +IFE     G   +V++++ALI++YGR+G  + ++ +   MK+  + 
Sbjct: 151 SLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVS 210

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           P+++TYN VI++C +GG+D++ ++ +F +M   G+QPD +T+N+LL  CS  GL + A  
Sbjct: 211 PSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEM 270

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           +F  M   G+  DI TY  L+D   K  ++D   E++ EM +    P + +Y+ +++ YA
Sbjct: 271 VFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYA 330

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           + G ++DA  +F  M+  G   +  +Y+ +L +Y K GR++E   +  EM+ S    DA 
Sbjct: 331 RIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAA 390

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TYN L+  +G+ G + EV  +F  M  + V PN+ TY  LI    KGGL+ +A +I    
Sbjct: 391 TYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHM 450

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            + G+      Y+ +I+A  +  + E A+  L+ M + G +P + TYN++I  F R    
Sbjct: 451 SEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLY 510

Query: 561 ECTVDDVER--DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
           + T   + +  D G  +E  + + +     +  ++ G+ + + IK + ++   +    ++
Sbjct: 511 KETEAILLKMGDFGVARERDSFNGVI----EGFRQGGQFE-EAIKAYVEMEKSRLVPDER 565

Query: 619 ENRCRQEILCILGV-------FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE- 670
                  + CI G+       FQ++    I PNV+ +  +L   ++ + + +A  LL+E 
Sbjct: 566 TLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELLDEM 625

Query: 671 LRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           L    + ++ V   ++ G    D+ W     +FD++          FYN L + LW  GQ
Sbjct: 626 LTNRASNIHQVIGQMIKGDFDDDSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQ 685

Query: 729 KRGAQLVVLEGKRRQVWENVWSESCL----DLHLMSSGAARAMVHAWLLNIHSIVFEGHE 784
           K  A  V+ E  +R  +  ++ +S L    D+H M  G+A   +  WL N++ I     +
Sbjct: 686 KERAVRVLGEATKRGHFPELFRKSKLVWSVDIHRMWEGSAYTAISVWLNNMYEIFMNRQD 745

Query: 785 LPKLLSILT--GWGKHSKVVGDGALRRAVEVLLTGM-GAPFWVANCNLGRF 832
           +P+L S++   G  + S V  D  + +AV   L  +  + F  +  N GR 
Sbjct: 746 IPQLASVIVVRGLLEKSSVAQDFPIGKAVHSFLQDIVPSSFSYSGWNNGRI 796


>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 754

 Score =  305 bits (781), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 198/747 (26%), Positives = 385/747 (51%), Gaps = 34/747 (4%)

Query: 69  STTVAPNPKPFHSLSPLPSSK-SELAPD---FSGRRSTRFVSK-MHFGRPKIAMST-RHS 122
           +  + PN KP  +L P P+ +   L+ D   +SG    R  +K +  G P + +   ++S
Sbjct: 17  TNLLKPNLKP--NLLPYPNRRLISLSGDRKTYSGAAKARAKTKELVLGNPSVVVEKGKYS 74

Query: 123 VVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFA 182
              E  ++ +++      S+   L+ F+ KL   +D+  + +E   RG+W ++++ F + 
Sbjct: 75  YDVETLINKLSSLPPRG-SIARCLEIFKNKLS-LNDFALVFKEFAQRGDWQRSLRLFKY- 131

Query: 183 VKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSG 242
           ++R+        + + +IS+LGR G ++ +  IFE     G   +V++++ALI++YGR G
Sbjct: 132 MQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHG 191

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
             + ++ +   MK+  + P+++TYN VI++C +GG++++ ++ +F +M   G+QPD IT+
Sbjct: 192 QYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITY 251

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           N+LL  C+  GL + A  +F  M   G+  DI TY  L++   K  +++   E++ EM +
Sbjct: 252 NTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMES 311

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
               P++ +Y+ +++ YA  G +  A+ +F +M+      + V+Y+ +L++Y   GR+++
Sbjct: 312 SGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDD 371

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
              +  EM+ S    D  TYN L+  +G+ G + EV  +F  M  + V PN+ TY  LI 
Sbjct: 372 VRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIY 431

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
              KGGL+++A +I     + G+      Y+ +I+A  +    E A+ + + M + G +P
Sbjct: 432 ACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKP 491

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII 602
            V TYNS+I+ F R    + + + +   +G+   + + D+        V E  R   Q  
Sbjct: 492 TVETYNSLINMFARGGLYKES-EAIMWKMGESGVARDRDSF-----NGVIEGYRQGGQFE 545

Query: 603 KVFGQLVAEKAGQGKKENRCRQEIL---CILGV-------FQKMHKLKIKPNVVTFSAIL 652
           +     V  +  + + + R  + +L   C  G+       F+++    I P+V+ +  ++
Sbjct: 546 EAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMI 605

Query: 653 NACSRCNSFEDASMLLEELRLFD-NQVYGVAHGLLMGYRDNI--WVQALSLFDEVKLMDS 709
              +R N ++DA  +L+E+     + ++ V   ++ G  D+   W     +FD++     
Sbjct: 606 AVYARSNRWDDAYEVLDEMVTNKVSNIHQVVGKMMKGDYDDYSNWQMVEYVFDKLNSEGC 665

Query: 710 STASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL----DLHLMSSGAAR 765
                FYN L + LW  GQK  A  V+ E  +R ++  ++ +S L    D+H M  G A 
Sbjct: 666 GLGMRFYNTLLEALWWLGQKERAARVLSEAIKRGLFPELFRKSKLVWSVDVHRMWEGGAC 725

Query: 766 AMVHAWLLNIHSIVFEGHELPKLLSIL 792
             +  WL N+H +  +G +LP + S++
Sbjct: 726 TAISVWLNNMHEMFLKGEDLPHVASVV 752


>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  298 bits (764), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 177/661 (26%), Positives = 356/661 (53%), Gaps = 24/661 (3%)

Query: 157 DDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF 216
           +D++ + +E   RG+W ++++ F + ++R+        + + +IS+LGR G ++    IF
Sbjct: 113 NDFSLVFKEFAARGDWQRSLRLFKY-MQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIF 171

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           +   ++G   +V++++ALI+AYGR+G  + ++ +   MKR  + PN++TYN VI+AC +G
Sbjct: 172 DEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARG 231

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
            +D++ ++ +F +M   GVQPD +T+N+LL+ C+  GL + A  +F  M+  GI  +I T
Sbjct: 232 DLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITT 291

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y+ +++   K  +++    ++ EM ++   P++ +Y+ +I+ +AK G + +A+++F +M+
Sbjct: 292 YSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQ 351

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G   +  +Y+ +L++Y K GR+++   +  +M+ S    DA TYN L+  +G+ G + 
Sbjct: 352 AAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFK 411

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           EV  +F  +  + + PN+ TY  L+    KGGL+++A +I       G+      YS LI
Sbjct: 412 EVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLI 471

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT---ECTVDDVERDLGK 573
           +A  +  L + A+   + M + G +  + TYNS+I  F R       E  +  + R+ G 
Sbjct: 472 EAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRM-REYGI 530

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV- 632
            + + +   +     +  +++G+ + + IK F ++   +    ++       + C  G+ 
Sbjct: 531 SRNAKSFSGII----EGYRQSGQYE-EAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLV 585

Query: 633 ------FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL-RLFDNQVYGVAHGL 685
                 F ++    I P+V+ +  +L   ++   ++DAS LL+E+ +   + ++ V   +
Sbjct: 586 DESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIGQM 645

Query: 686 LMG-YRDNI-WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQ 743
           + G Y D+  W     +FD++          FYN L + LW  GQK  A  V+ E  +R 
Sbjct: 646 IKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAARVLTEATKRG 705

Query: 744 VWENVWSESCL----DLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHS 799
           ++  ++ +S L    D+H M  G A   V  W+  ++ ++ +G +LP+L +++ G G   
Sbjct: 706 LFPELFRQSKLVWSVDVHRMWEGGAYTAVSLWVNKMNEMLMDGEDLPQLAAVVVGRGSLE 765

Query: 800 K 800
           K
Sbjct: 766 K 766


>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  298 bits (763), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 177/661 (26%), Positives = 356/661 (53%), Gaps = 24/661 (3%)

Query: 157 DDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF 216
           +D++ + +E   RG+W ++++ F + ++R+        + + +IS+LGR G ++    IF
Sbjct: 113 NDFSLVFKEFAARGDWQRSLRLFKY-MQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIF 171

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           +   ++G   +V++++ALI+AYGR+G  + ++ +   MKR  + PN++TYN VI+AC +G
Sbjct: 172 DEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARG 231

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
            +D++ ++ +F +M   GVQPD +T+N+LL+ C+  GL + A  +F  M+  GI  +I T
Sbjct: 232 DLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITT 291

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y+ +++   K  +++    ++ EM ++   P++ +Y+ +I+ +AK G + +A+++F +M+
Sbjct: 292 YSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQ 351

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G   +  +Y+ +L++Y K GR+++   +  +M+ S    DA TYN L+  +G+ G + 
Sbjct: 352 AAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFK 411

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           EV  +F  +  + + PN+ TY  L+    KGGL+++A +I       G+      YS LI
Sbjct: 412 EVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLI 471

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT---ECTVDDVERDLGK 573
           +A  +  L + A+   + M + G +  + TYNS+I  F R       E  +  + R+ G 
Sbjct: 472 EAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRM-REYGI 530

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV- 632
            + + +   +     +  +++G+ + + IK F ++   +    ++       + C  G+ 
Sbjct: 531 SRNAKSFSGII----EGYRQSGQYE-EAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLV 585

Query: 633 ------FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL-RLFDNQVYGVAHGL 685
                 F ++    I P+V+ +  +L   ++   ++DAS LL+E+ +   + ++ V   +
Sbjct: 586 DESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIGQM 645

Query: 686 LMG-YRDNI-WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQ 743
           + G Y D+  W     +FD++          FYN L + LW  GQK  A  V+ E  +R 
Sbjct: 646 IKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAARVLTEATKRG 705

Query: 744 VWENVWSESCL----DLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHS 799
           ++  ++ +S L    D+H M  G A   V  W+  ++ ++ +G +LP+L +++ G G   
Sbjct: 706 LFPELFRQSKLVWSVDVHRMWEGGAYTAVSLWVNKMNEMLMDGEDLPQLAAVVVGRGSLE 765

Query: 800 K 800
           K
Sbjct: 766 K 766


>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 863

 Score =  295 bits (755), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 189/725 (26%), Positives = 378/725 (52%), Gaps = 59/725 (8%)

Query: 110 FGRPKIAMST-RHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGN 168
            G P +++   ++S   E  ++ +++      S+   L  F+ KL   +D+  + +E   
Sbjct: 60  LGNPSVSVEKGKYSYDVESLINKLSSLPPRG-SIARCLDIFKNKLS-LNDFALVFKEFAG 117

Query: 169 RGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTV 228
           RG+W ++++ F + ++R+        + + MIS+LGR G +D    +F+   ++G   +V
Sbjct: 118 RGDWQRSLRLFKY-MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSV 176

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           ++++ALI+AYGR+G  + ++ + + MK   + P+++TYN VI+AC +GG+D++ ++ +F 
Sbjct: 177 FSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFA 236

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +M   G+QPD +T+N+LL+ C+  GL + A  +F  M   GI  D+ TY+ L++   K  
Sbjct: 237 EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLR 296

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +++   ++++EM +    P++ +Y+ +++ YAK+G + +A+ +F +M+  G   +  +Y+
Sbjct: 297 RLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYS 356

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +L+++ + GR+++   +  EM+SS    DA TYN L+  +G+ G + EV  +F  M  +
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE 416

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + P++ TY  +I    KGGL+++A +I +      +      Y+ +I+A  +  L E A
Sbjct: 417 NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSA---TTECTVDD-VERDLGKQKESANLDAMC 584
           +   + M + G  P++ TY+S++ +F R      +E  +   V+  + + +++ N     
Sbjct: 477 LVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEA 536

Query: 585 SQDDKDVQEAGRT-----------DNQIIKV------FGQLVAEKAGQGKKENRCRQEIL 627
            +     +EA +T           D + ++       F +LV E          CR++  
Sbjct: 537 YKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDE----------CREQ-- 584

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV---YGVAHG 684
                F++M    I P+++ +  +L    +   ++D + LLEE  +  N+V   + V   
Sbjct: 585 -----FEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEE--MLSNRVSNIHQVIGQ 637

Query: 685 LLMG-YRDNI-WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
           ++ G Y D+  W     + D++          FYNAL D LW  GQK  A  V+ E  +R
Sbjct: 638 MIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKR 697

Query: 743 QVWEN-------VWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGW 795
            ++         VWS   +D+H MS G     +  WL +++ ++  G +LP+L  +++  
Sbjct: 698 GLFPELFRKNKLVWS---VDVHRMSEGGMYTALSVWLNDMNDMLLNGEDLPQLAVVVSVR 754

Query: 796 GKHSK 800
           G+  K
Sbjct: 755 GQLEK 759


>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
 gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74850, chloroplastic; AltName: Full=Protein PLASTID
           TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
 gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
 gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
 gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
          Length = 862

 Score =  291 bits (746), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 192/739 (25%), Positives = 384/739 (51%), Gaps = 61/739 (8%)

Query: 96  FSGRRSTRFVSKMHFGRPKIAMST-RHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLC 154
           FSG+   +    +  G P +++   ++S   E  ++ +++      S+   L  F+ KL 
Sbjct: 47  FSGKIKAK-TKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRG-SIARCLDIFKNKL- 103

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
             +D+  + +E   RG+W ++++ F + ++R+        + + MIS+LGR G +D    
Sbjct: 104 SLNDFALVFKEFAGRGDWQRSLRLFKY-MQRQIWCKPNEHIYTIMISLLGREGLLDKCLE 162

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +F+   ++G   +V++++ALI+AYGR+G  + ++ + + MK   + P+++TYN VI+AC 
Sbjct: 163 VFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACA 222

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           +GG+D++ ++ +F +M   G+QPD +T+N+LL+ C+  GL + A  +F  M   GI  D+
Sbjct: 223 RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDL 282

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TY+ L++   K  +++   +++ EM +    P++ +Y+ +++ YAK+G + +A+ +F +
Sbjct: 283 TTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQ 342

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M+  G   +  +Y+ +L+++ + GR+++   +  EM+SS    DA TYN L+  +G+ G 
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
           + EV  +F  M  + + P++ TY  +I    KGGL+++A +I +      +      Y+ 
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTG 462

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA---TTECTVDD-VERD 570
           +I+A  +  L E A+   + M + G  P++ T++S++ +F R      +E  +   V+  
Sbjct: 463 VIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSG 522

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRT-----------DNQIIKV------FGQLVAEKA 613
           + + +++ N      +     +EA +T           D + ++       F +LV E  
Sbjct: 523 IPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDE-- 580

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
                   CR++       F++M    I P+++ +  +L    +   ++D + LLEE  +
Sbjct: 581 --------CREQ-------FEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEE--M 623

Query: 674 FDNQV---YGVAHGLLMG-YRDNI-WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
             N+V   + V   ++ G Y D+  W     + D++          FYNAL D LW  GQ
Sbjct: 624 LSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQ 683

Query: 729 KRGAQLVVLEGKRRQVWEN-------VWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFE 781
           K  A  V+ E  +R ++         VWS   +D+H MS G     +  WL +I+ ++ +
Sbjct: 684 KERAARVLNEATKRGLFPELFRKNKLVWS---VDVHRMSEGGMYTALSVWLNDINDMLLK 740

Query: 782 GHELPKLLSILTGWGKHSK 800
           G +LP+L  +++  G+  K
Sbjct: 741 G-DLPQLAVVVSVRGQLEK 758


>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 730

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 145/457 (31%), Positives = 255/457 (55%), Gaps = 6/457 (1%)

Query: 125 AEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVK 184
            EE L  +     D+  +  +L   E  L  ++  + +++ LG  G+W+KA++ F +  +
Sbjct: 17  GEELLRKIVVLPNDEC-VSSVLTTSEPNLSSSELLS-IMKGLGREGQWNKALEVFNWMRQ 74

Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
               + D G   + M+ ILGR  ++     +F++   EGY   VYA+++LISA  R+   
Sbjct: 75  SVNFRPD-GVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKF 133

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           +EA+  F  MK    +P+LVTYN +ID  GK G  +++++E+F++M   G+QPD  T+N+
Sbjct: 134 KEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNT 193

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
            +  C+ G L E A  LF +M       D  TYN LLD   K    + A  ++ EM +  
Sbjct: 194 AITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAG 253

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
             PN+VTY+ ++  + +AG  + A  M   M   GI  D  +Y ++LS Y++ G+ E+A+
Sbjct: 254 CLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAM 313

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +  +M +S    ++ T+NAL+G +GK   + E+  +FE M+A  V P+++T+++L+  +
Sbjct: 314 EIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAF 373

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            K G+Y E +++FR  K+AG + D   ++ LI+A  + G  + A+S+ D M + G  P++
Sbjct: 374 GKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDL 433

Query: 545 VTYNSIIDAF---GRSATTECTVDDVERDLGKQKESA 578
            T+N+++ A    GR    E  +D++ R   K  + A
Sbjct: 434 ATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIA 470



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 208/416 (50%), Gaps = 40/416 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++S   R GKV+ A  I+            + F+ALI  +G++    E + +F  M+ 
Sbjct: 297 TSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQA 356

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P++VT+N+++ A GK G+ +  V+++F  M + G +PD+ TFN L+    R G  +
Sbjct: 357 CGVEPDIVTWNSLLGAFGKNGM-YSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSD 415

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A ++++ M+  G   D+ T+NTLL A+ +  + + A  I+ E+   +  PN + Y++M+
Sbjct: 416 QALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASML 475

Query: 377 DGYAKAGRL-----------------------------------DDALNMFSEMKFLGIG 401
             YA  G L                                   D+A + F  M+  G  
Sbjct: 476 HAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYL 535

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D  ++N ++S+Y K G  ++A      + S+G+  D VTYN L+G YG++G Y +    
Sbjct: 536 SDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEAT 595

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
             +  A   +P+L++Y+T+I  YSK G    A +IF E    G++ D   Y+  +     
Sbjct: 596 LRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVN 655

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            G+   A+S++  M K G +P+ VTY +++DA+ +    E    +VER L   K S
Sbjct: 656 GGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFE----EVERILKFIKSS 707



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 142/594 (23%), Positives = 259/594 (43%), Gaps = 82/594 (13%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKV-DLAKNI 215
           YT L+  L    ++ +A+  F    ++ +    Q  L +   +I + G+ G+  +    +
Sbjct: 120 YTSLISALSRNRKFKEALGFF----EQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILEL 175

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
           FE    +G     Y ++  I+A      C+EA  +F  MK  N  P+ VTYNA++D  GK
Sbjct: 176 FEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGK 235

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            G  +     +  +M   G  P+ +T+N LL+   R GL  AA  + + MV +GI+ D+F
Sbjct: 236 AGW-YNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVF 294

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TY +LL A  +  +++ A EI  +M   N +PN  T++ +I  + K     + + +F +M
Sbjct: 295 TYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDM 354

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           +  G+  D V++N++L  + K G + E L V + M+ +G   D  T+N L+  YG+ G  
Sbjct: 355 QACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSS 414

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D+   +++ M     +P+L T++TL+   ++ G ++ A  I  E  ++  K + + Y+++
Sbjct: 415 DQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASM 474

Query: 516 IDALCKNG----------------------------LVESAVSLLDE-------MTKEGI 540
           + A    G                            LV S  SL+DE       M   G 
Sbjct: 475 LHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGY 534

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESANLDAM------------CSQ 586
             +  T+N++I  +G+    +   D     R  G + +    + +            C  
Sbjct: 535 LSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEA 594

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC------------------ 628
             ++   AG+T + +          K GQ     R   E++                   
Sbjct: 595 TLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYV 654

Query: 629 -------ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 675
                   L V + MHK   KP+ VT+  +++A  +   FE+   +L+ ++  D
Sbjct: 655 NGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSD 708



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/488 (25%), Positives = 223/488 (45%), Gaps = 54/488 (11%)

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHR-GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           S++    R G W  A  +FN M        D  T   +L  + + +Q+     +   +  
Sbjct: 51  SIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLRE 110

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR-FE 421
           +    +V  Y+++I   ++  +  +AL  F +MK  G     V+YN ++ +Y K GR +E
Sbjct: 111 EGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWE 170

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
             L + +EM++ GI+ D  TYN  +         +E   +F QMK+   +P+ +TY+ L+
Sbjct: 171 NILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALL 230

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           DVY K G Y EA  + +E + AG   ++V Y+ L+ A  + GL  +A  + D M  +GI 
Sbjct: 231 DVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIE 290

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
           P+V TY S++ A+ R+   E  ++     +  Q  ++N    C+ +         T N +
Sbjct: 291 PDVFTYTSLLSAYSRAGKVEQAME-----IYNQMRTSN----CTPNS-------FTFNAL 334

Query: 602 IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
           I + G+            N+   E++ I   F+ M    ++P++VT++++L A      F
Sbjct: 335 IGMHGK------------NKNFSEMMVI---FEDMQACGVEPDIVTWNSLLGA------F 373

Query: 662 EDASMLLEELRLF----------DNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSS 710
               M  E L++F          D   + +   L+  Y R     QALS++D +     +
Sbjct: 374 GKNGMYSEVLKVFRGMKKAGFEPDKATFNI---LIEAYGRCGSSDQALSIYDGMLQAGCT 430

Query: 711 TASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHA 770
              A +N L   L   G+   A+L++ E  R     N  + + + LH  ++G     +  
Sbjct: 431 PDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASM-LHAYANGGELEKLKE 489

Query: 771 WLLNIHSI 778
            +  +H+I
Sbjct: 490 MVDTLHTI 497



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 1/216 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L    + +  +   VD A++ F    + GY +    F+A+IS YG+ G   +A   F  +
Sbjct: 505 LLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALL 564

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           +   L+P++VTYN ++   G+ G+ ++       + +  G  PD +++N+++   S+ G 
Sbjct: 565 RSTGLEPDVVTYNCLMGMYGREGM-YRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQ 623

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             +A  +F+EMV  GI  D FTYNT +     G     A  ++  M      P+ VTY T
Sbjct: 624 LSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRT 683

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           ++D Y K G+ ++   +   +K       + +Y  +
Sbjct: 684 LVDAYCKIGKFEEVERILKFIKSSDPNFSKAAYRRI 719


>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
 gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
 gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 157/564 (27%), Positives = 293/564 (51%), Gaps = 34/564 (6%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKND-QGKLASAMISILGRLGKVDLAKNIFETAL 220
            L+ LG   ++  A++ F + +K+++ ++     + + +IS+LG+ G+V  A N+F    
Sbjct: 141 FLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQ 200

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDF 280
            +G+   VY++++LISA+  SG  +EA++VF  M+    KP L+TYN +++  GK G  +
Sbjct: 201 EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW 260

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
             +  + + M  +G+ PD  T+N+L+  C RG L + A  +F EM   G   D  TYN L
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 320

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           LD   K  +   A +++ EM     SP++VTY+++I  YA+ G LD+A+ + ++M   G 
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D  +Y T+LS + + G+ E A+ + +EM ++G + +  T+NA +  YG +GK+ E+ +
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F+++    +SP+++T++TL+ V+ + G+  E   +F+E K+AG   +   ++ LI A  
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           + G  E A+++   M   G+ P++ TYN+++ A  R    E +    E+ L +       
Sbjct: 501 RCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS----EKVLAE------- 549

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
                       E GR     +     L A   G         +EI  +  + ++++   
Sbjct: 550 -----------MEDGRCKPNELTYCSLLHAYANG---------KEIGLMHSLAEEVYSGV 589

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEEL--RLFDNQVYGVAHGLLMGYRDNIWVQAL 698
           I+P  V    ++  CS+C+   +A     EL  R F   +  +   + +  R  +  +A 
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 649

Query: 699 SLFDEVKLMDSSTASAFYNALTDM 722
            + D +K    + + A YN+L  M
Sbjct: 650 GVLDYMKERGFTPSMATYNSLMYM 673



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 197/366 (53%), Gaps = 3/366 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S   R GKV+ A +IFE   N G    +  F+A I  YG  G   E + +F+ +  
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P++VT+N ++   G+ G+D   V  +F +M R G  P+R TFN+L++  SR G +E
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMD-SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  ++  M+  G+  D+ TYNT+L A+ +G   + + +++AEM      PN +TY +++
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDR-VSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
             YA  G+    ++  +E  + G+   R V   T++ + +K     EA     E++  G 
Sbjct: 567 HAYAN-GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  T N+++  YG++    +   + + MK    +P++ TY++L+ ++S+   + ++ +
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I RE    G+K D++ Y+ +I A C+N  +  A  +  EM   GI P+V+TYN+ I ++ 
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745

Query: 556 RSATTE 561
             +  E
Sbjct: 746 ADSMFE 751



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 219/464 (47%), Gaps = 34/464 (7%)

Query: 112 RPKIAMSTRH---------SVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADD---- 158
           RPK AM   +         S+V   +L  ++A+ARD    G + +  E K   A+     
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSL--ISAYARD----GMLDEAMELKNQMAEKGTKP 382

Query: 159 ----YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK----LASAMISILGRLGKVD 210
               YT LL      G+   A+  F      EE +N   K      +A I + G  GK  
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIF------EEMRNAGCKPNICTFNAFIKMYGNRGKFT 436

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
               IF+     G    +  ++ L++ +G++G   E   VF  MKR    P   T+N +I
Sbjct: 437 EMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
            A  + G  F+  + ++  ML  GV PD  T+N++LA  +RGG+WE +  +  EM     
Sbjct: 497 SAYSRCG-SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             +  TY +LL A   G ++ L   +  E+ +  I P  V   T++   +K   L +A  
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
            FSE+K  G   D  + N+++SIY +     +A  V   M+  G      TYN+L+  + 
Sbjct: 616 AFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHS 675

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           +   + +   +  ++ A  + P++++Y+T+I  Y +    ++A +IF E + +G+  DV+
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVI 735

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            Y+  I +   + + E A+ ++  M K G RPN  TYNSI+D +
Sbjct: 736 TYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 143/304 (47%), Gaps = 34/304 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS   R G  + A  ++   L+ G    +  ++ +++A  R G  +++  V   M+ 
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552

Query: 257 YNLKPNLVTYNAVIDACGKG---------------------GVDFKHVVEI--------- 286
              KPN +TY +++ A   G                      V  K +V +         
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE 612

Query: 287 ----FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
               F ++   G  PD  T NS++++  R  +   A  + + M  RG    + TYN+L+ 
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
              + A    + EI+ E+ AK I P++++Y+T+I  Y +  R+ DA  +FSEM+  GI  
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D ++YNT +  YA    FEEA+ V + M   G R +  TYN+++ GY K  + DE +   
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792

Query: 463 EQMK 466
           E ++
Sbjct: 793 EDLR 796



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 175/388 (45%), Gaps = 51/388 (13%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-----SAMISILGRL 206
           C  +  TF   ++  GNRG++++ ++ F       +  N  G        + ++++ G+ 
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIF-------DEINVCGLSPDIVTWNTLLAVFGQN 467

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G       +F+     G+      F+ LISAY R G  ++A++V+  M    + P+L TY
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTY 527

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-------------------- 306
           N V+ A  +GG+ ++   ++  +M     +P+ +T+ SLL                    
Sbjct: 528 NTVLAALARGGM-WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586

Query: 307 ---------------AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
                           VCS+  L   A   F+E+  RG   DI T N+++    +   + 
Sbjct: 587 SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A  ++  M  +  +P++ TY++++  ++++     +  +  E+   GI  D +SYNTV+
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
             Y +  R  +A  +  EM +SGI  D +TYN  +G Y     ++E   +   M      
Sbjct: 707 YAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCR 766

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           PN  TY++++D Y K     EA ++F E
Sbjct: 767 PNQNTYNSIVDGYCKLNRKDEA-KLFVE 793



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 98/187 (52%), Gaps = 1/187 (0%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           EA   F+ +K     P++ T N+++   G+  +  K    + D M   G  P   T+NSL
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAK-ANGVLDYMKERGFTPSMATYNSL 670

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           + + SR   +  +  +  E++ +GI  DI +YNT++ A C+  +M  A  I +EM    I
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            P+V+TY+T I  YA     ++A+ +   M   G   ++ +YN+++  Y KL R +EA L
Sbjct: 731 VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKL 790

Query: 426 VCKEMES 432
             +++ +
Sbjct: 791 FVEDLRN 797



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 146/362 (40%), Gaps = 44/362 (12%)

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A + F + K     LD      ++S+  K GR   A  +   ++  G   D  +Y +L+ 
Sbjct: 157 AFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLIS 216

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL-YKEAMQIFREFKQAGLK 506
            +   G+Y E   +F++M+ D   P L+TY+ +++V+ K G  + +   +  + K  G+ 
Sbjct: 217 AFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIA 276

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            D   Y+ LI    +  L + A  + +EM   G   + VTYN+++D +G+S   +  +  
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKV 336

Query: 567 VERDL--GKQKESANLDAMCSQDDKD--VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
           +   +  G        +++ S   +D  + EA    NQ+        AEK          
Sbjct: 337 LNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM--------AEKG--------- 379

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQVY 679
                              KP+V T++ +L+   R    E A  + EE+R      N   
Sbjct: 380 ------------------TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICT 421

Query: 680 GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEG 739
             A   + G R   + + + +FDE+ +   S     +N L  +    G       V  E 
Sbjct: 422 FNAFIKMYGNRGK-FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480

Query: 740 KR 741
           KR
Sbjct: 481 KR 482



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 41/275 (14%)

Query: 453 GKYDEV-RRMFEQMK--ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
           G+ D V   +FE  K   +  S  LL +   +  + K  L   A   F + K      D 
Sbjct: 114 GQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDN 173

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
            + + +I  L K G V SA ++ + + ++G   +V +Y S+I AF  S            
Sbjct: 174 SVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANS------------ 221

Query: 570 DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI 629
             G+ +E+ N+     +D    +    T N I+ VFG++       G   N+       I
Sbjct: 222 --GRYREAVNVFKKMEEDG--CKPTLITYNVILNVFGKM-------GTPWNK-------I 263

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL----FDNQVYGVAHGL 685
             + +KM    I P+  T++ ++  C R +  ++A+ + EE++     +D   Y   + L
Sbjct: 264 TSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTY---NAL 320

Query: 686 LMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
           L  Y + +   +A+ + +E+ L   S +   YN+L
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355


>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 819

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 188/718 (26%), Positives = 334/718 (46%), Gaps = 92/718 (12%)

Query: 31  HRQSHHPSSRPHWTS--------------HKVSLTKPPLSPSP--------RNAPKPAAT 68
           H Q+HH S  P  T+              H V L + P S  P        RN  +   +
Sbjct: 22  HDQNHHLSRTPFLTTSLSSPPPPPVEPLLHDVFLHQNPNSRQPITSQTSRNRNRTRIGKS 81

Query: 69  STTVAPNPKPFHSLSPLPSS--KSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAE 126
                  P  +H LSP      +S + P+F   +    +S++         ST   ++A 
Sbjct: 82  RDPNLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLDALLSELFEPFKDKPESTSSELLA- 140

Query: 127 EALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKRE 186
                   F +    LG   KKF+  LC  D              W        F  +++
Sbjct: 141 --------FLK---GLG-FHKKFDLALCAFD--------------W--------FMKQKD 166

Query: 187 ERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQE 246
            +      + + +IS+LG+ G+V  A N+F     +G+   VY++++LISA+  SG  +E
Sbjct: 167 YQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYRE 226

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL 306
           A++VF  M+    KP L+TYN +++  GK G  +  +  + + M  +G+ PD  T+N+L+
Sbjct: 227 AVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI 286

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
             C RG L + A  +F EM   G   D  TYN LLD   K  +   A +++ EM     S
Sbjct: 287 TCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFS 346

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P++VTY+++I  YA+ G LD+A+ + ++M   G   D  +Y T+LS + + G+ E A+ +
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNI 406

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            +EM ++G + +  T+NA +  YG +GK+ ++ ++F+++    +SP+++T++TL+ V+ +
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G+  E   +F+E K+AG   +   ++ LI A  + G  E A+++   M   G+ P++ T
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG 606
           YN+++ A  R    E +    E+ L +                   E GR     +    
Sbjct: 527 YNTVLAALARGGMWEQS----EKVLAE------------------MEDGRCKPNELTYCS 564

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            L A   G         +EI  +  + ++++   I+P  V    ++  CS+C+   +A  
Sbjct: 565 LLHAYANG---------KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615

Query: 667 LLEEL--RLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDM 722
              EL  R F   +  +   + +  R  +  +A  + D +K    + + A YN+L  M
Sbjct: 616 AFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYM 673



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/552 (25%), Positives = 257/552 (46%), Gaps = 74/552 (13%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKV-DLAKNI 215
           YT L+    N G + +A+  F    K+ E +  +  L +   ++++ G++G   +   ++
Sbjct: 211 YTSLISAFANSGRYREAVNVF----KKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSL 266

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
            E   ++G     Y ++ LI+   R    QEA  VF  MK      + VTYNA++D  GK
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGK 326

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
                K  +++ ++M  NG  P  +T+NSL++  +R G+ + A  L N+M  +G   D+F
Sbjct: 327 SHRP-KEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TY TLL    +  +++ A  I  EM      PN+ T++  I  Y   G+  D + +F E+
Sbjct: 386 TYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEI 445

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G+  D V++NT+L+++ + G   E   V KEM+ +G   +  T+N L+  Y + G +
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           ++   ++ +M    V+P+L TY+T++   ++GG+++++ ++  E +    K + + Y +L
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565

Query: 516 IDALCK---------------NGLVESAVSLL--------------------DEMTKEGI 540
           + A                  +G++E    LL                     E+ + G 
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
            P++ T NS++  +GR              +GK  E   LD M    ++    +  T N 
Sbjct: 626 SPDITTLNSMVSIYGRRQM-----------VGKANEV--LDYM---KERGFTPSMATYNS 669

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           ++     + +  A  GK E   R EIL             IKP++++++ ++ A  R   
Sbjct: 670 LM----YMHSRSADFGKSEEILR-EILA----------KGIKPDIISYNTVIYAYCRNTR 714

Query: 661 FEDASMLLEELR 672
             DAS +  E+R
Sbjct: 715 MRDASRIFSEMR 726



 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 197/366 (53%), Gaps = 3/366 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S   R GKV+ A NIFE   N G    +  F+A I  YG  G   + + +F+ +  
Sbjct: 388 TTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINV 447

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P++VT+N ++   G+ G+D   V  +F +M R G  P+R TFN+L++  SR G +E
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMD-SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  ++  M+  G+  D+ TYNT+L A+ +G   + + +++AEM      PN +TY +++
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDR-VSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
             YA  G+    ++  +E  + G+   R V   T++ + +K     EA     E++  G 
Sbjct: 567 HAYAN-GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  T N+++  YG++    +   + + MK    +P++ TY++L+ ++S+   + ++ +
Sbjct: 626 SPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I RE    G+K D++ Y+ +I A C+N  +  A  +  EM   GI P+V+TYN+ I ++ 
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYA 745

Query: 556 RSATTE 561
             +  E
Sbjct: 746 ADSMFE 751



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 223/465 (47%), Gaps = 36/465 (7%)

Query: 112 RPKIAMSTRH---------SVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADD---- 158
           RPK AM   +         S+V   +L  ++A+ARD    G + +  E K   A+     
Sbjct: 329 RPKEAMKVLNEMELNGFSPSIVTYNSL--ISAYARD----GMLDEAMELKNQMAEKGTKP 382

Query: 159 ----YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK----LASAMISILGRLGK-V 209
               YT LL      G+   A+  F      EE +N   K      +A I + G  GK V
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMNIF------EEMRNAGCKPNICTFNAFIKMYGNRGKFV 436

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
           D+ K IF+     G    +  ++ L++ +G++G   E   VF  MKR    P   T+N +
Sbjct: 437 DMMK-IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495

Query: 270 IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
           I A  + G  F+  + ++  ML  GV PD  T+N++LA  +RGG+WE +  +  EM    
Sbjct: 496 ISAYSRCG-SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
              +  TY +LL A   G ++ L   +  E+ +  I P  V   T++   +K   L +A 
Sbjct: 555 CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAE 614

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
             FSE+K  G   D  + N+++SIY +     +A  V   M+  G      TYN+L+  +
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMH 674

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            +   + +   +  ++ A  + P++++Y+T+I  Y +    ++A +IF E + +G+  DV
Sbjct: 675 SRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDV 734

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + Y+  I +   + + E A+ ++  M K G RPN  TYNSI+D +
Sbjct: 735 ITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 164/368 (44%), Gaps = 53/368 (14%)

Query: 144 DILKKF-EFKLCGAD----DYTFLLRELGNRGEWSKAIQCF------AFAVKREERKNDQ 192
           D++K F E  +CG       +  LL   G  G  S+    F       F  +RE      
Sbjct: 437 DMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET----- 491

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
               + +IS   R G  + A  ++   L+ G    +  ++ +++A  R G  +++  V  
Sbjct: 492 ---FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548

Query: 253 SMKRYNLKPNLVTYNAVIDACGKG---------------------GVDFKHVVEI----- 286
            M+    KPN +TY +++ A   G                      V  K +V +     
Sbjct: 549 EMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCD 608

Query: 287 --------FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                   F ++   G  PD  T NS++++  R  +   A  + + M  RG    + TYN
Sbjct: 609 LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYN 668

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L+    + A    + EI+ E+ AK I P++++Y+T+I  Y +  R+ DA  +FSEM+  
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDS 728

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI  D ++YNT +  YA    FEEA+ V + M   G R +  TYN+++ GY K  + DE 
Sbjct: 729 GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788

Query: 459 RRMFEQMK 466
           +   E ++
Sbjct: 789 KLFVEDLR 796



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 155/338 (45%), Gaps = 37/338 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++++ G+ G       +F+     G+      F+ LISAY R G  ++A++V+  M  
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL---------- 306
             + P+L TYN V+ A  +GG+ ++   ++  +M     +P+ +T+ SLL          
Sbjct: 518 AGVTPDLSTYNTVLAALARGGM-WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIG 576

Query: 307 -------------------------AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
                                     VCS+  L   A   F+E+  RG   DI T N+++
Sbjct: 577 LMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
               +   +  A E++  M  +  +P++ TY++++  ++++     +  +  E+   GI 
Sbjct: 637 SIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK 696

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D +SYNTV+  Y +  R  +A  +  EM  SGI  D +TYN  +G Y     ++E   +
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGV 756

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
              M      PN  TY++++D Y K     EA ++F E
Sbjct: 757 VRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA-KLFVE 793



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 1/187 (0%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           EA   F+ +K     P++ T N+++   G+  +  K   E+ D M   G  P   T+NSL
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGK-ANEVLDYMKERGFTPSMATYNSL 670

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           + + SR   +  +  +  E++ +GI  DI +YNT++ A C+  +M  A  I +EM    I
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGI 730

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            P+V+TY+T I  YA     ++A+ +   M   G   ++ +YN+++  Y KL R +EA L
Sbjct: 731 VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKL 790

Query: 426 VCKEMES 432
             +++ +
Sbjct: 791 FVEDLRN 797


>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
 gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 128/365 (35%), Positives = 217/365 (59%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS+LG+ GKV +A ++      +G+G  VYA+++LI+A   +G  +EA+ VF  M+ 
Sbjct: 2   AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              KP L+TYN +++  GK G+ +  +  +F+ M   GV PD  T+N+L+  C RG L E
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHE 121

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +F +M   G   D  TYN LLD   K  +   A E++ EM     SP++VTY+++I
Sbjct: 122 EAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLI 181

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             YA+ G L +A+ + ++M   GI LD  +Y T+LS + + G+ E A+ V  EM ++G +
Sbjct: 182 SAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCK 241

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +  T+NAL+  +G +GK+ E+ ++FE++K  C  P+++T++TL+ V+ + G+  E   +
Sbjct: 242 PNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGV 301

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F+E K+AG   +   Y+ LI A  + G  + A+ +   M + GI P++ TYN+++ A  R
Sbjct: 302 FKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALAR 361

Query: 557 SATTE 561
               E
Sbjct: 362 GGLWE 366



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 256/516 (49%), Gaps = 39/516 (7%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKV-DLAKNI 215
           YT L+    + G + +A+  F    K+ E +  +  L +   ++++ G++G   +  K +
Sbjct: 36  YTSLITACVSNGRYREAVMVF----KKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGL 91

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
           FE   N G     Y ++ LI+   R    +EA +VF  MK     P+ VTYNA++D  GK
Sbjct: 92  FEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGK 151

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
                K  +E+  +M  NG  P  +T+NSL++  +R GL + A  L N+MV  GI+ D+F
Sbjct: 152 SRRT-KEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVF 210

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TY TLL    +  + + A  + AEM A    PN+ T++ +I  +   G+  + + +F E+
Sbjct: 211 TYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEI 270

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           K      D V++NT+L+++ + G   E   V KEM+ +G   +  TYN L+  Y + G +
Sbjct: 271 KNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSF 330

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D+   ++++M    ++P+L TY+ ++   ++GGL++++ +IF E K    K + + Y +L
Sbjct: 331 DQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSL 390

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           + A      +   ++L +E+    I P+ V   +++        ++C       DL  + 
Sbjct: 391 LHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLV-----LVNSKC-------DLLVEA 438

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
           E A L+        D+     T N ++ ++G+               RQ       +   
Sbjct: 439 EVAFLELKRKGFSPDLS----TLNAMLSIYGR---------------RQMFTKTNEILNF 479

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           M++    P++ T+++++   SR  +FE +  +L+E+
Sbjct: 480 MNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEI 515



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 183/360 (50%), Gaps = 1/360 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I + G  GK      +FE   N      +  ++ L++ +G++G   E   VF  MKR
Sbjct: 248 NALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 307

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P   TYN +I A  + G  F   ++I+  ML  G+ PD  T+N++LA  +RGGLWE
Sbjct: 308 AGFVPERDTYNTLISAYSRCG-SFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWE 366

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            +  +F EM       +  TY +LL A   G ++     +  E+ +  I P+ V   T++
Sbjct: 367 QSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLV 426

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
              +K   L +A   F E+K  G   D  + N +LSIY +   F +   +   M  SG  
Sbjct: 427 LVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFT 486

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
               TYN+L+  + +   ++    + +++ A  + P+ ++Y+T+I  Y + G  KEA +I
Sbjct: 487 PSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRI 546

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F E +++GL  DV+ Y+  + +   + + E A+ ++  M K G +PN  TYNS++D + +
Sbjct: 547 FSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCK 606



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 203/400 (50%), Gaps = 7/400 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S   R GK + A  +F      G    +  F+ALI  +G  G   E + VF  +K 
Sbjct: 213 TTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKN 272

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++VT+N ++   G+ G+D   V  +F +M R G  P+R T+N+L++  SR G ++
Sbjct: 273 SCCVPDIVTWNTLLAVFGQNGMD-SEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFD 331

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +++  M+  GI  D+ TYN +L A+ +G   + + +I AEM      PN +TY +++
Sbjct: 332 QAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLL 391

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             YA    +   L +  E+    I    V   T++ + +K     EA +   E++  G  
Sbjct: 392 HAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFS 451

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  T NA+L  YG++  + +   +   M     +P+L TY++L+ ++S+   ++ + ++
Sbjct: 452 PDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEV 511

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +E    G+K D + Y+ +I A C+NG ++ A  +  EM + G+ P+V+TYN+ + ++  
Sbjct: 512 LKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAA 571

Query: 557 SATTECTVDDVERDL------GKQKESANLDAMCSQDDKD 590
            +  E  +D V   +       +   ++ +D  C  + +D
Sbjct: 572 DSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRD 611



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 97/184 (52%), Gaps = 3/184 (1%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           +G+   +   +A++S YGR     +   + N M      P+L TYN+++    +   +F+
Sbjct: 448 KGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSE-NFE 506

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
              E+  ++L  G++PD I++N+++ A C  G + EA+R +F+EM   G+  D+ TYNT 
Sbjct: 507 RSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASR-IFSEMRESGLVPDVITYNTF 565

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           + +    +  + A +++  M      PN  TY++++DGY K    DDA+   S +  L  
Sbjct: 566 VASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFISSLHELDP 625

Query: 401 GLDR 404
            + R
Sbjct: 626 HISR 629



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/195 (18%), Positives = 72/195 (36%), Gaps = 65/195 (33%)

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           + +I +  K G    A  +  +  + G   DV  Y++LI A   NG    AV +  +M +
Sbjct: 2   AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
           EG +P ++TY                                                  
Sbjct: 62  EGCKPTLITY-------------------------------------------------- 71

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
            N I+ V+G++       G   N+       I G+F+ M    + P+  T++ ++  C R
Sbjct: 72  -NVILNVYGKM-------GMPWNK-------IKGLFEGMKNAGVLPDEYTYNTLITCCRR 116

Query: 658 CNSFEDASMLLEELR 672
            +  E+A+ + ++++
Sbjct: 117 GSLHEEAAAVFKDMK 131


>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
 gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 229/393 (58%), Gaps = 9/393 (2%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +I++LG+ GKV +A ++      +G+   VYA+++LI+A   +G  +EA+ VF  M+
Sbjct: 1   VAVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKME 60

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               KP L+TYN +++  GK G+ +  +  +F+ M   G+ PD  T+N+L+  C RG L+
Sbjct: 61  EEGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLY 120

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  +F +M   G   D  TYNTLLD   K  ++  A E++ EM     SP++VTY+++
Sbjct: 121 EEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSL 180

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I  YA+ G L++A+ + ++M   GI LD  +Y  +LS + + G+ E A+ V +EM ++G 
Sbjct: 181 ISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGC 240

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + +  T+NAL+  +G +GK+ E+ ++FE++K  C  P+++T++TL+ V+ + G+  E   
Sbjct: 241 KPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSG 300

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F+E K+ G   +   Y+ LI A  + G  + A+++   M   GI P++ TYN+++ A  
Sbjct: 301 VFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALA 360

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           R    E      E+ L + +     D MC  ++
Sbjct: 361 RGGLWE----QSEKILAEMQ-----DGMCKPNE 384



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 248/517 (47%), Gaps = 41/517 (7%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN---- 214
           YT L+    + G + +A+  F    K+ E +  +  L +  + IL   GK+ +  N    
Sbjct: 36  YTSLITACVSNGRYREAVMVF----KKMEEEGCKPTLITYNV-ILNVYGKMGMPWNKITG 90

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +FE   N G     Y ++ LI+   R    +EA +VF  MK     P+ VTYN ++D  G
Sbjct: 91  LFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYG 150

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K     K  +E+  +M  NG  P  +T+NSL++  +R GL E A  L N+MV RGI  D+
Sbjct: 151 KSR-RIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDV 209

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
           FTY  +L    +  + + A  +  EM      PN+ T++ +I  +   G+  + + +F E
Sbjct: 210 FTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEE 269

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           +K      D V++NT+L+++ + G   E   V KEM+  G   +  TYN L+  Y + G 
Sbjct: 270 IKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGS 329

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
           +D+   M+++M    ++P+L TY+ ++   ++GGL++++ +I  E +    K + + + +
Sbjct: 330 FDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCS 389

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           L+ A      +   ++L +E+    I P+ V   +++        ++C       DL  +
Sbjct: 390 LLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLV-----LVNSKC-------DLLLE 437

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
            E A L+        D+     T N +I ++G+               RQ +     +  
Sbjct: 438 AERAFLELKRKGFSPDLS----TLNAMIAIYGR---------------RQMVTKTNEILN 478

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            M +    P++ T+++++   S+  +FE +  +L+E+
Sbjct: 479 FMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEI 515



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 195/371 (52%), Gaps = 1/371 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +AM+S   R GK + A  +FE     G    +  F+ALI  +G  G   E + VF  +K 
Sbjct: 213 TAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKI 272

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++VT+N ++   G+ G+D   V  +F +M R G  P+R T+N+L++  SR G ++
Sbjct: 273 CCCVPDIVTWNTLLAVFGQNGMD-SEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFD 331

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  ++  M+  GI  D+ TYN +L A+ +G   + + +I+AEM      PN +T+ +++
Sbjct: 332 QAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLL 391

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             YA    +   L +  E+    I    V   T++ + +K     EA     E++  G  
Sbjct: 392 HAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFS 451

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  T NA++  YG++    +   +   MK    +P+L TY++L+ ++S+   ++ + ++
Sbjct: 452 PDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEV 511

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +E    G+K D++ Y+ +I A C+NG ++ A  +  EM + G+ P+V+TYN+ + ++  
Sbjct: 512 LKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAA 571

Query: 557 SATTECTVDDV 567
            +  E  +D V
Sbjct: 572 DSMFEEAIDVV 582



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 180/360 (50%), Gaps = 1/360 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I + G  GK      +FE          +  ++ L++ +G++G   E   VF  MKR
Sbjct: 248 NALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 307

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P   TYN +I A  + G  F   + ++  ML  G+ PD  T+N++LA  +RGGLWE
Sbjct: 308 VGFVPERDTYNTLISAYSRCG-SFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWE 366

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            +  +  EM       +  T+ +LL A   G ++     +  E+ +  I P+ V   T++
Sbjct: 367 QSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLV 426

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
              +K   L +A   F E+K  G   D  + N +++IY +     +   +   M+ SG  
Sbjct: 427 LVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFT 486

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
               TYN+L+  + +   ++    + +++ A  + P++++Y+T+I  Y + G  KEA  I
Sbjct: 487 PSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHI 546

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F E +++GL  DV+ Y+  + +   + + E A+ ++  M K G +PN  TYNS+ID + +
Sbjct: 547 FSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCK 606



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 4/200 (2%)

Query: 208 KVDL---AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           K DL   A+  F     +G+   +   +A+I+ YGR     +   + N MK     P+L 
Sbjct: 431 KCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLA 490

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TYN+++    +   +F+   E+  ++L  G++PD I++N+++    R G  + A ++F+E
Sbjct: 491 TYNSLMYMHSQSE-NFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSE 549

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G+  D+ TYNT + +    +  + A +++  M      PN  TY+++IDGY K  R
Sbjct: 550 MRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNR 609

Query: 385 LDDALNMFSEMKFLGIGLDR 404
            DDA+   S +  L   + R
Sbjct: 610 RDDAIKFISSLHELDPHISR 629



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 95/209 (45%), Gaps = 32/209 (15%)

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG 572
           + +I+ L K G V  A SLL+ + K+G  P+V  Y S+I        T C  +      G
Sbjct: 2   AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLI--------TACVSN------G 47

Query: 573 KQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
           + +E+  +      +++  +    T N I+ V+G++       G   N+       I G+
Sbjct: 48  RYREAVMVFK--KMEEEGCKPTLITYNVILNVYGKM-------GMPWNK-------ITGL 91

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--R 690
           F+ M    I P+  T++ ++  C R + +E+A+ + E+++        V +  L+    +
Sbjct: 92  FEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGK 151

Query: 691 DNIWVQALSLFDEVKLMDSSTASAFYNAL 719
                +A+ +  E+++   S +   YN+L
Sbjct: 152 SRRIKEAIEVLREMEVNGCSPSIVTYNSL 180


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  252 bits (643), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 152/478 (31%), Positives = 246/478 (51%), Gaps = 36/478 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++++ L + G+ + A+ +FE      +   V ++S LI++ GR+G  + A+ V   M+ 
Sbjct: 13  NSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQA 72

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              KPNL TYN ++D  GK G  F   + +  +M  NG  PD  T+N L++   + G   
Sbjct: 73  KGCKPNLWTYNTLVDCLGKAG-QFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLS 131

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF EM  RG   D FTYN+L+  + K  +   A E++ EM      P+V+TYS++I
Sbjct: 132 EAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLI 191

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G  K G    A  +F EMK  G   D +++  ++    K GR ++AL +  EM+  G++
Sbjct: 192 TGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVK 251

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              VTYNAL+ G+GK G   E   + ++MK +   P+++TYS LI    K     EA Q+
Sbjct: 252 PGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQV 311

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            ++ ++ G   D + Y+ LI+ L K GL+  A  L D M  +G  P+VVTY+++I A G+
Sbjct: 312 LKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGK 371

Query: 557 SATTE--CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
           +A  E  C + +    +G Q    +L   CS               II V G     KAG
Sbjct: 372 AARVESACVLFEEMESVGIQ---PDLFTYCS---------------IITVLG-----KAG 408

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           Q    +R          +F +M    + P+V+T++A LN+  R   F++A  + E+++
Sbjct: 409 QVDDADR----------LFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMK 456



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 268/532 (50%), Gaps = 35/532 (6%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  LG  G+W  A++  A    +  + N      + ++  LG+ G+ D A  +   
Sbjct: 47  YSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLW--TYNTLVDCLGKAGQFDEALRLLAE 104

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + G    V  ++ LIS  G++G   EA ++F  M+     P+  TYN++I   GK G 
Sbjct: 105 MRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGR 164

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K  +E+ ++M R+G  PD +T++SL+    + G    A  LF EM  RG   D  T+ 
Sbjct: 165 SQK-AMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFT 223

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+DA+ K  ++D A E++ EM  + + P VVTY+ +I G+ K G L +A N+  EMK  
Sbjct: 224 ALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRN 283

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   D V+Y+ +++   K  + +EA  V K+ME  G   D +TYN L+ G GK G  ++ 
Sbjct: 284 GCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDA 343

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            R+F++MK+   +P+++TYSTLI    K    + A  +F E +  G++ D+  Y ++I  
Sbjct: 344 GRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITV 403

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
           L K G V+ A  L  EM  +G+ P+V+TYN+ +++ GR         +  +     KES 
Sbjct: 404 LGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGG----RFKEARKIFEDMKESG 459

Query: 579 NLDAMCSQD--------DKDVQEAGRTDNQIIK---VFGQLVAEKAGQGKKENRCRQEIL 627
            L  + + D         K+V +A     ++I+    F  L         K + C  EIL
Sbjct: 460 LLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSL---------KFDECL-EIL 509

Query: 628 CILGVFQKMHKL-------KIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              G   + H+L        + P   +++A+++A ++     +A   LE+L+
Sbjct: 510 TSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLK 561



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/427 (31%), Positives = 234/427 (54%), Gaps = 5/427 (1%)

Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           ++L++ E   C  D   Y+ L+  LG  GE  KA + F   +KR  RK D     +A++ 
Sbjct: 170 ELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQ-EMKRRGRKPDSITF-TALMD 227

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            LG+ G+VD A  + +     G    V  ++ALI+ +G+ G   EA ++ + MKR   KP
Sbjct: 228 ALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKP 287

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           ++VTY+ +I    K         ++   M + G  PD IT+N+L+    + GL   A  L
Sbjct: 288 DVVTYSCLITGLIKAS-QLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRL 346

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F+ M  +G + D+ TY+TL+ A+ K A+++ A  +  EM +  I P++ TY ++I    K
Sbjct: 347 FDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGK 406

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           AG++DDA  +FSEM+  G+  D ++YN  L+   + GRF+EA  + ++M+ SG+  D  T
Sbjct: 407 AGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVAT 466

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y+ALL G  K  + D+   + +++     + + L +   +++ +  G   EA ++ +   
Sbjct: 467 YDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFAN 526

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             GL      Y+ALIDAL K G V  A + L+++ ++G +P++V+Y+S+I A G++   +
Sbjct: 527 SKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQID 586

Query: 562 CTVDDVE 568
              + +E
Sbjct: 587 TAFELLE 593



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 160/552 (28%), Positives = 268/552 (48%), Gaps = 61/552 (11%)

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           PN+VTYN++++A  K G   +    +F+++      PD ++++ L+    R G WEAA  
Sbjct: 7   PNVVTYNSLLNALAKAG-QCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           +  EM  +G   +++TYNTL+D + K  Q D A  ++AEM      P+V TY+ +I    
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           KAGRL +A  +F+EM+  G   D  +YN+++    K+GR ++A+ + +EME  G   D +
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY++L+ G GK G+  +  ++F++MK     P+ +T++ L+D   K G   +A+++  E 
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           K+ G+K  VV Y+ALI    K G +  A +LLDEM + G +P+VVTY+ +I    +++  
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKAS-- 303

Query: 561 ECTVDDVERDLGK-QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
              +D+  + L K +KE    D +             T N +I   G     KAG     
Sbjct: 304 --QLDEACQVLKKMEKEGCPPDTI-------------TYNTLINGLG-----KAGLLNDA 343

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVY 679
            R          +F +M      P+VVT+S ++ A  +    E A +L EE+     +  
Sbjct: 344 GR----------LFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEM-----ESV 388

Query: 680 GVAHGLLMGYRDNIWV--------QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRG 731
           G+   L   Y   I V         A  LF E++    S     YNA  + L   G+ + 
Sbjct: 389 GIQPDLFT-YCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKE 447

Query: 732 AQLVVLEGKRRQVWENVWSESCLDLHLMSS-------GAARAMVHAWLLNIHSIVFEGHE 784
           A+ +  + K   +  +V +   L L L  +       G  + ++           F+  +
Sbjct: 448 ARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIE------QGCAFDSLK 501

Query: 785 LPKLLSILTGWG 796
             + L ILT WG
Sbjct: 502 FDECLEILTSWG 513



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 161/323 (49%), Gaps = 1/323 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+ L +  ++D A  + +    EG       ++ LI+  G++G   +A  +F+ MK 
Sbjct: 293 SCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKS 352

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++VTY+ +I A GK     +    +F++M   G+QPD  T+ S++ V  + G  +
Sbjct: 353 KGCNPDVVTYSTLITALGKA-ARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVD 411

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF+EM  +G+  D+ TYN  L+++ +G +   A +I  +M    + P+V TY  ++
Sbjct: 412 DADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALL 471

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G +K   +DDA  +  E+   G   D + ++  L I    G  +EA  + +   S G+ 
Sbjct: 472 LGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLW 531

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             A +YNAL+    K G+  E     E +K     P++++YS+LI    + G    A ++
Sbjct: 532 PGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFEL 591

Query: 497 FREFKQAGLKADVVLYSALIDAL 519
             E  + GLK     YS L+  L
Sbjct: 592 LEEMSKRGLKLSPRSYSNLVRKL 614



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 167/320 (52%), Gaps = 24/320 (7%)

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           SPNVVTY+++++  AKAG+ ++A  +F E+K      D VSY+ +++   + G++E AL 
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           V  EM++ G + +  TYN L+   GK G++DE  R+  +M+ +   P++ TY+ LI    
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G   EA  +F E ++ G   D   Y++LI  L K G  + A+ LL+EM + G  P+V+
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 546 TYNSIIDAFGRSATTECTVDDVE--RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           TY+S+I   G+   T       +  +  G++ +S    A+       + +AGR D+ +  
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDA----LGKAGRVDDAL-- 239

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILG------------VFQKMHKLKIKPNVVTFSAI 651
              +L+ E   +G K        L I G            +  +M +   KP+VVT+S +
Sbjct: 240 ---ELLDEMKERGVKPGVVTYNAL-IAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCL 295

Query: 652 LNACSRCNSFEDASMLLEEL 671
           +    + +  ++A  +L+++
Sbjct: 296 ITGLIKASQLDEACQVLKKM 315


>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 607

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 161/577 (27%), Positives = 285/577 (49%), Gaps = 60/577 (10%)

Query: 144 DILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCF-------------AF-AVKREERK 189
           D +KK    L     Y   +   G  G+W +A++               A+ AV     K
Sbjct: 21  DGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAK 80

Query: 190 NDQGKLA-------------------SAMISILGRLGKVDLAKNIFETALNEGYGNTVYA 230
             Q K+A                    A I+   R G+  +A ++    L       V  
Sbjct: 81  GGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVII 140

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +++ I++  ++G  + A+S+   M    L P++++Y++ I ACG+GG  ++  +E+F+DM
Sbjct: 141 YNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGG-RWEEALELFEDM 199

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
             +GV PD IT+ S +A C+ GG W+ A +L  ++   G+  ++ +Y++++ A  K  Q 
Sbjct: 200 RTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQW 259

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
            +A +++ EM A  ++PN++TY+  ID  AK GR  +A+++  EM  +G+  D VSY++V
Sbjct: 260 KIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSV 319

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +   +K  R++EA+ + +EM + G+  +A++YN+ +    K G++ E + +  +M    V
Sbjct: 320 IDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGV 379

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           +  ++ Y++ I   +KG  +KEA+ + RE    GL   V  YS+ IDA  K  L   A  
Sbjct: 380 TQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKE 439

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL------DAMC 584
           LL EM   G+ PN V YNS IDA GR    E  V D+ R++     S ++       A C
Sbjct: 440 LLREMATVGLAPNEVCYNSAIDACGRGDQWEEAV-DLLREMPTVGLSPDVFSYSSAIAAC 498

Query: 585 SQDD---------KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
           ++ D         K++  AG   + I          K G+ K            + +  +
Sbjct: 499 AKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMA----------VALLGE 548

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           M    + PN++++S+ ++AC R   +++   LLEE+R
Sbjct: 549 MRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMR 585



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 154/577 (26%), Positives = 283/577 (49%), Gaps = 41/577 (7%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
           G+W KA++      K      DQ     A I+  GR G+ + A  +      EG    + 
Sbjct: 11  GDWRKALRAVDGMKKLPGWLIDQKSYCMA-ITACGRGGQWEQAVRLLREMPTEGAAPDLS 69

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           A+SA+I A  + G  + A+     M    + P+  +Y A I+AC +GG  +K  +++  +
Sbjct: 70  AYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGG-RWKIALDLLRE 128

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           ML   V P+ I +NS +  C++ G WE A +L  EM   G+  D+ +Y++ + A  +G +
Sbjct: 129 MLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGR 188

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            + A E+  +M    ++P+V+TY + I   A  GR  +A+++  ++  +G+  + +SY++
Sbjct: 189 WEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSS 248

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           V++  AK G+++ AL + +EM++  +  + +TYNA +    K G++ E   +  +M    
Sbjct: 249 VITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVG 308

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + P++++YS++ID  SKG  +KEA+ I RE    GL  + + Y++ IDA  K G  + A 
Sbjct: 309 LPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAK 368

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ-KESANLDAMCSQDD 588
            LL EM   G+   V+ YNS I A  +               G+Q KE+  L        
Sbjct: 369 GLLREMPTAGVTQRVIGYNSAIAACAK---------------GEQWKEALAL-------L 406

Query: 589 KDVQEAGRTDNQIIKVFGQLVA-EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
           +++   G        VF    A +  G+G    + ++       + ++M  + + PN V 
Sbjct: 407 REMPTVGLHTT----VFSYSSAIDACGKGNLWIKAKE-------LLREMATVGLAPNEVC 455

Query: 648 FSAILNACSRCNSFEDASMLLEELRL--FDNQVYGVAHGLLMGYRDNIWVQALSLFDEVK 705
           +++ ++AC R + +E+A  LL E+        V+  +  +    + + W +AL++  E+ 
Sbjct: 456 YNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMS 515

Query: 706 LMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
               +     YN+  D     G+ + A  V L G+ R
Sbjct: 516 AAGLAPDLICYNSAIDACSKGGRWKMA--VALLGEMR 550



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 253/487 (51%), Gaps = 39/487 (8%)

Query: 240 RSGYCQEAISVFNSMKRYNLKPNLV---TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQ 296
           RSG  ++A+   + MK+  L   L+   +Y   I ACG+GG  ++  V +  +M   G  
Sbjct: 9   RSGDWRKALRAVDGMKK--LPGWLIDQKSYCMAITACGRGG-QWEQAVRLLREMPTEGAA 65

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           PD   +++++  C++GG W+ A     EM  +GI  D  +Y   ++A  +G +  +A ++
Sbjct: 66  PDLSAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDL 125

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           + EM A++++PNV+ Y++ I+  AKAG+ + A+++  EM  +G+  D +SY++ +S   +
Sbjct: 126 LREMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGR 185

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
            GR+EEAL + ++M +SG+  D +TY + +      G++ E   +  ++    ++PN+++
Sbjct: 186 GGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVIS 245

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           YS++I   +K G +K A+ + RE K   L  +++ Y+A IDA  K G  + A+ LL EM 
Sbjct: 246 YSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMP 305

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
             G+ P+VV+Y+S+IDA        C+  D      + KE+ ++        +++   G 
Sbjct: 306 TVGLPPDVVSYSSVIDA--------CSKGD------RWKEAIDI-------LREMPTVGL 344

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
           + N I          K GQ K+            G+ ++M    +   V+ +++ + AC+
Sbjct: 345 SPNAISYNSAIDACAKGGQWKEAK----------GLLREMPTAGVTQRVIGYNSAIAACA 394

Query: 657 RCNSFEDASMLLEELRL--FDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASA 714
           +   +++A  LL E+        V+  +  +    + N+W++A  L  E+  +  +    
Sbjct: 395 KGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEV 454

Query: 715 FYNALTD 721
            YN+  D
Sbjct: 455 CYNSAID 461



 Score =  212 bits (539), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 196/355 (55%), Gaps = 1/355 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++I+   + G+  +A ++            +  ++A I A  + G  +EAI +   M  
Sbjct: 247 SSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPT 306

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P++V+Y++VIDAC KG   +K  ++I  +M   G+ P+ I++NS +  C++GG W+
Sbjct: 307 VGLPPDVVSYSSVIDACSKGD-RWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWK 365

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A+ L  EM   G+ Q +  YN+ + A  KG Q   A  ++ EMP   +   V +YS+ I
Sbjct: 366 EAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAI 425

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D   K      A  +  EM  +G+  + V YN+ +    +  ++EEA+ + +EM + G+ 
Sbjct: 426 DACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLS 485

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  +Y++ +    K  ++ E   + ++M A  ++P+L+ Y++ ID  SKGG +K A+ +
Sbjct: 486 PDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVAL 545

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             E + AGL  +++ YS+ IDA  + G  +  ++LL+EM   G+ P+V+TY++++
Sbjct: 546 LGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSGVVPDVITYHALM 600



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 189/364 (51%), Gaps = 15/364 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA------SAMISILGRLGKVDLA 212
           Y+ ++      G+W  A+           R+    +LA      +A I    + G+   A
Sbjct: 246 YSSVITACAKEGQWKIALDLL--------REMKAMRLAPNIITYNAAIDACAKGGRWKEA 297

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
            ++       G    V ++S++I A  +    +EAI +   M    L PN ++YN+ IDA
Sbjct: 298 IDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDA 357

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C KGG  +K    +  +M   GV    I +NS +A C++G  W+ A  L  EM   G+  
Sbjct: 358 CAKGG-QWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHT 416

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
            +F+Y++ +DA  KG     A E++ EM    ++PN V Y++ ID   +  + ++A+++ 
Sbjct: 417 TVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLL 476

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            EM  +G+  D  SY++ ++  AK  +++EAL V KEM ++G+  D + YN+ +    K 
Sbjct: 477 REMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKG 536

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G++     +  +M+A  ++PN+++YS+ ID   +GG +KE + +  E + +G+  DV+ Y
Sbjct: 537 GRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSGVVPDVITY 596

Query: 513 SALI 516
            AL+
Sbjct: 597 HALM 600


>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 233/400 (58%), Gaps = 1/400 (0%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKND-QGKLASAMISILGRLGKVDLAKNIF 216
           D   +++ LG   +   A++ F +   R+E +    G + + +ISILG+ G+V  A ++ 
Sbjct: 129 DVLGIVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLL 188

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
                +G+   VYA++++I+A+  +G  +EA+ VF  M+    KP L+TYN +++  GK 
Sbjct: 189 HNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKM 248

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G+ +  +V + D M   G+ PD  T+N+L++ C RG L+E A  +  EM   G   D  T
Sbjct: 249 GMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVT 308

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN LLD   K  +   A E++ EM      P++VTY+++I  YA+ G L+DAL + ++M 
Sbjct: 309 YNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMV 368

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             GI  D  +Y T+LS + K G+ + A+ + +EM + G + +  T+NAL+  +G +GK+ 
Sbjct: 369 EKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFT 428

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E+ ++FE +K    SP+++T++TL+ V+ + G+  E   +F+E K+AG   +   ++ LI
Sbjct: 429 EMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLI 488

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +  + G  + A+++   M + G+ P++ +YN+++ A  R
Sbjct: 489 SSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALAR 528



 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 246/517 (47%), Gaps = 41/517 (7%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN---- 214
           YT ++    + G + +A+  F    K+ E    +  L +  + IL   GK+ +  N    
Sbjct: 203 YTSMITAFTSNGRYREAVMVF----KKMEEVGCKPTLITYNV-ILNVYGKMGMPWNKMVG 257

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           + +   + G     Y ++ LIS   R    +EA  V   MK     P+ VTYNA++D  G
Sbjct: 258 LVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYG 317

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K     K  +E+  +M  NG  P  +T+NSL++  +R GL E A  L N+MV +GI  D+
Sbjct: 318 KSRRS-KEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDV 376

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
           FTY TLL    K  +   A +I  EM  +   PN+ T++ +I  +   G+  + + +F +
Sbjct: 377 FTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFED 436

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           +K      D V++NT+LS++ + G   E   V KEM+ +G   +  T+N L+  Y + G 
Sbjct: 437 IKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGS 496

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
           +D+   ++++M    V+P+L +Y+ ++   ++GGL+K++ ++  E K    K + + Y +
Sbjct: 497 FDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCS 556

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           L+ A      +E   +L +E+    I P  V   +++        ++C       DL  +
Sbjct: 557 LLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLV-----LVNSKC-------DLLME 604

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
            E A L+        D+     T N ++ ++G+               RQ +     +  
Sbjct: 605 TERAFLELRQRGFSPDIT----TLNAMVSIYGR---------------RQMVAKANEILD 645

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            M +    P++ T+++++   SR  +FE +  +L E+
Sbjct: 646 CMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREI 682



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 192/360 (53%), Gaps = 3/360 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S   + GK   A  IFE   NEG    +  F+ALI  +G  G   E + VF  +K 
Sbjct: 380 TTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKT 439

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           +   P++VT+N ++   G+ G+D   V  +F +M R G  P+R TFN+L++  SR G ++
Sbjct: 440 FQCSPDIVTWNTLLSVFGQNGMD-SEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFD 498

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  ++  M+  G++ D+ +YN +L A+ +G     + +++AEM      PN +TY +++
Sbjct: 499 QAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLL 558

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDR-VSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
             YA    ++    +  E+ + GI   R V   T++ + +K     E      E+   G 
Sbjct: 559 HAYANGKEIERMCALAEEI-YSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGF 617

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  T NA++  YG++    +   + + MK    +P+L TY++L+ +YS+   ++ + +
Sbjct: 618 SPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEE 677

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I RE    G++ D++ Y+ +I A C+NG +  A  +L EM + G  P+++TYN+ I ++ 
Sbjct: 678 ILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYA 737



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 190/418 (45%), Gaps = 46/418 (11%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK----LASAMISILGRLGKVDLAKN 214
           YT LL      G+   A+Q F      EE +N+  K      +A+I + G  GK      
Sbjct: 379 YTTLLSGFEKAGKDKAAVQIF------EEMRNEGCKPNICTFNALIKMHGNRGKFTEMMK 432

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +FE          +  ++ L+S +G++G   E   VF  MKR    P   T+N +I +  
Sbjct: 433 VFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYS 492

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           + G  F   + ++  ML  GV PD  ++N++LA  +RGGLW+ +  +  EM       + 
Sbjct: 493 RCG-SFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNE 551

Query: 335 FTYNTLLDAICKGAQMD----LAFEIMA-------------------------------E 359
            TY +LL A   G +++    LA EI +                               E
Sbjct: 552 LTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLE 611

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           +  +  SP++ T + M+  Y +   +  A  +   MK  G      +YN+++ +Y++   
Sbjct: 612 LRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSAN 671

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
           FE +  + +E+ + GIR D ++YN ++  Y + G+  +  R+  +M+    +P+++TY+T
Sbjct: 672 FERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNT 731

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
            I  Y+   ++ EA+ +     + G K +   Y++++D  CK    + A   ++ + K
Sbjct: 732 FIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRK 789



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 168/335 (50%), Gaps = 32/335 (9%)

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            ++  + KG ++  A  ++  +       +V  Y++MI  +   GR  +A+ +F +M+ +
Sbjct: 170 VIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEV 229

Query: 399 GIGLDRVSYNTVLSIYAKLGR-FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           G     ++YN +L++Y K+G  + + + +   M+S+GI  D+ TYN L+    +   Y+E
Sbjct: 230 GCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEE 289

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              + ++MK    SP+ +TY+ L+DVY K    KEAM++ +E +  G    +V Y++LI 
Sbjct: 290 AAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLIS 349

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
           A  ++GL+E A+ L ++M ++GI+P+V TY +++  F                     E 
Sbjct: 350 AYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGF---------------------EK 388

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
           A  D    Q  ++++  G   N  I  F  L+     +GK           ++ VF+ + 
Sbjct: 389 AGKDKAAVQIFEEMRNEGCKPN--ICTFNALIKMHGNRGKFTE--------MMKVFEDIK 438

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             +  P++VT++ +L+   +     + S + +E++
Sbjct: 439 TFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMK 473



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 155/305 (50%), Gaps = 36/305 (11%)

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +I    K GR+  A ++   +   G  +D  +Y ++++ +   GR+ EA++V K+ME 
Sbjct: 169 AVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEE 228

Query: 433 SGIRKDAVTYNALLGGYGKQG-KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            G +   +TYN +L  YGK G  ++++  + ++MK+  ++P+  TY+TLI    +G LY+
Sbjct: 229 VGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYE 288

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA  + +E K AG   D V Y+AL+D   K+   + A+ +L EM   G  P++VTYNS+I
Sbjct: 289 EAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLI 348

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA- 610
            A+ R    E                   DA+    ++ V++  + D   +  +  L++ 
Sbjct: 349 SAYARDGLLE-------------------DAL-ELKNQMVEKGIKPD---VFTYTTLLSG 385

Query: 611 -EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
            EKAG+ K            + +F++M     KPN+ TF+A++        F +   + E
Sbjct: 386 FEKAGKDK----------AAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFE 435

Query: 670 ELRLF 674
           +++ F
Sbjct: 436 DIKTF 440



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 90/233 (38%), Gaps = 68/233 (29%)

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS---TLIDVYSKGGLYKEAMQIFREF 500
            ++ G G   K D   R+FE ++    S  LL  S    +I +  KGG    A  +    
Sbjct: 132 GIVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNL 191

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            + G   DV  Y+++I A   NG    AV +  +M + G +P ++TY             
Sbjct: 192 CKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITY------------- 238

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
                                                 N I+ V+G++       G   N
Sbjct: 239 --------------------------------------NVILNVYGKM-------GMPWN 253

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
           +       ++G+  +M    I P+  T++ +++ C R N +E+A+ +L+E++L
Sbjct: 254 K-------MVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKL 299


>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 228/389 (58%), Gaps = 3/389 (0%)

Query: 175 AIQCFAFAVKREERKND-QGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSA 233
           A+  F F   RE+  +     + + +IS+LG+ G+   A ++     N+G    +YA+++
Sbjct: 166 ALCVFYFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTS 225

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN 293
           LI+AY  +G  +EA+ VF  ++    +P L+TYN +++  GK G+ +  +  + D M  +
Sbjct: 226 LITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSS 285

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           GV PD  T+N+L++ C RG L+E A  +F EM   G   D  TYN LLD   K  +   A
Sbjct: 286 GVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREA 345

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
            E++ EM A   +P++VTY+++I  YA+ G LD+A+ + S+M   GI  D  +Y T+LS 
Sbjct: 346 MEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSG 405

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK-ADCVSP 472
           + K G+ + A+ V +EM  +G + +  T+NAL+  +G +G + E+ ++FE++K  +CV P
Sbjct: 406 FEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECV-P 464

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           +++T++TL+ V+ + G+  E   +F+E K+AG   +   ++ LI A  + G  + A+++ 
Sbjct: 465 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIY 524

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             M   G+ P++ TYN+++ A  R    E
Sbjct: 525 RRMLDAGVTPDLSTYNAVLAALARGGLWE 553



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/596 (24%), Positives = 282/596 (47%), Gaps = 40/596 (6%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKV-DLAKNI 215
           YT L+    + G + +A+  F    K+ E +  +  L +   ++++ G++G        +
Sbjct: 223 YTSLITAYASNGRYREAVMVF----KKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGL 278

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
            ++  + G    +Y ++ LIS+  R    +EA  VF  MK     P+ VTYNA++D  GK
Sbjct: 279 VDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGK 338

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
                +  +E+  +M  +G  P  +T+NSL++  +R GL + A  L ++MV +GI  D+F
Sbjct: 339 SRRP-REAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVF 397

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TY TLL    K  + D A ++  EM      PN+ T++ +I  +   G   + + +F E+
Sbjct: 398 TYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEI 457

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           K      D V++NT+L+++ + G   E   V KEM+ +G   +  T+N L+  Y + G +
Sbjct: 458 KICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFF 517

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D+   ++ +M    V+P+L TY+ ++   ++GGL++++ ++  E K    K + + Y +L
Sbjct: 518 DQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSL 577

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS-ATTECTVDDVE-RDLGK 573
           + A      VE   +L +E+    I P  V   +++  + +S   TE     +E R+ G 
Sbjct: 578 LHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGF 637

Query: 574 QKESANLDAMCSQDDKD------------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
             +   L+AM S   +             ++++G T +         +  +    +K   
Sbjct: 638 SPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSED 697

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV 681
             +EI+             +KP++++F+ ++ A  R    ++AS +  E++ F      +
Sbjct: 698 ILREIIA----------KGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVI 747

Query: 682 AHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASA---FYNALTDMLWHFGQKRGA 732
            +   +     D+++++A+   D VK M  +        YN+L D      ++  A
Sbjct: 748 TYNTFIASYASDSMFIEAI---DVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEA 800



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 194/408 (47%), Gaps = 42/408 (10%)

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           +++V  + G    A +L +++ + G+  DI+ Y +L+ A     +   A  +  ++  + 
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250

Query: 365 ISPNVVTYSTMIDGYAKAGR-LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
             P ++TY+ +++ Y K G        +   MK  G+  D  +YNT++S   +   +EEA
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEA 310

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
             V +EM+++G   D VTYNALL  YGK  +  E   + ++M+A   +P+++TY++LI  
Sbjct: 311 AEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISA 370

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y++ GL  EAM++  +  + G+K DV  Y+ L+    K G  + A+ + +EM   G +PN
Sbjct: 371 YARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPN 430

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           + T+N++I   G              ++ K  E   +   C  D         T N ++ 
Sbjct: 431 ICTFNALIKMHGNRGNF--------VEMMKVFEEIKI-CECVPDIV-------TWNTLLA 474

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           VFGQ            N    E+    GVF++M +    P   TF+ +++A SRC  F+ 
Sbjct: 475 VFGQ------------NGMDSEVS---GVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQ 519

Query: 664 ASMLLEELRLFDNQV------YGVAHGLLMGYRDNIWVQALSLFDEVK 705
           A  +    R+ D  V      Y      L   R  +W Q+  +  E+K
Sbjct: 520 AMAIYR--RMLDAGVTPDLSTYNAVLAALA--RGGLWEQSEKVLAEMK 563



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 179/375 (47%), Gaps = 38/375 (10%)

Query: 197 SAMISILGRLGK-VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           +A+I + G  G  V++ K   E  + E   + V  ++ L++ +G++G   E   VF  MK
Sbjct: 435 NALIKMHGNRGNFVEMMKVFEEIKICECVPDIV-TWNTLLAVFGQNGMDSEVSGVFKEMK 493

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           R    P   T+N +I A  + G  F   + I+  ML  GV PD  T+N++LA  +RGGLW
Sbjct: 494 RAGFVPERDTFNTLISAYSRCGF-FDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLW 552

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E +  +  EM       +  TY +LL A   G +++    +  E+ +  I P  V   T+
Sbjct: 553 EQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTL 612

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLD-------------------------------- 403
           +  Y+K+  L +    F E++  G   D                                
Sbjct: 613 VLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGF 672

Query: 404 ---RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
                +YN+++ +Y++   FE++  + +E+ + G++ D +++N ++  Y + G+  E  R
Sbjct: 673 TPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASR 732

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F +MK   ++P+++TY+T I  Y+   ++ EA+ + +   + G K +   Y++LID  C
Sbjct: 733 IFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFC 792

Query: 521 KNGLVESAVSLLDEM 535
           K    + A S +  +
Sbjct: 793 KLNRRDEASSFISNL 807



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 142/304 (46%), Gaps = 34/304 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS   R G  D A  I+   L+ G    +  ++A+++A  R G  +++  V   MK 
Sbjct: 505 NTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKD 564

Query: 257 YNLKPNLVTYNAVIDACGKG---------------------GVDFKHVVEIFD--DML-- 291
              KPN +TY +++ A   G                      V  K +V ++   D+L  
Sbjct: 565 GRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTE 624

Query: 292 ---------RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
                      G  PD  T N+++++  R  +      + N +   G    + TYN+L+ 
Sbjct: 625 TERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMY 684

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
              +    + + +I+ E+ AK + P++++++T+I  Y + GR+ +A  +F+EMK  G+  
Sbjct: 685 MYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAP 744

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D ++YNT ++ YA    F EA+ V K M  +G + +  TYN+L+  + K  + DE     
Sbjct: 745 DVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFI 804

Query: 463 EQMK 466
             ++
Sbjct: 805 SNLR 808



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 94/178 (52%), Gaps = 3/178 (1%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           +G+   +   +A++S YGR     +   + N +K     P+L TYN+++    +    F+
Sbjct: 635 QGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTE-HFE 693

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
              +I  +++  G++PD I+FN+++ A C  G + EA+R +F EM   G+  D+ TYNT 
Sbjct: 694 KSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASR-IFAEMKDFGLAPDVITYNTF 752

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           + +    +    A +++  M      PN  TY+++ID + K  R D+A +  S ++ L
Sbjct: 753 IASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNLRNL 810



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/160 (20%), Positives = 74/160 (46%), Gaps = 30/160 (18%)

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG 572
           + +I  L K G    A SLL ++  +G+  ++  Y S+I A+  +              G
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASN--------------G 234

Query: 573 KQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
           + +E+  +      +++  +    T N I+ V+G++       G   ++       I G+
Sbjct: 235 RYREAVMV--FKKLEEEGCRPTLITYNVILNVYGKM-------GMPWSK-------IAGL 278

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              M    + P++ T++ ++++C R + +E+A+ + EE++
Sbjct: 279 VDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMK 318


>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 228/389 (58%), Gaps = 3/389 (0%)

Query: 175 AIQCFAFAVKREERKND-QGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSA 233
           A+  F F   RE+  +     + + +IS+LG+ G+   A ++     N+G    +YA+++
Sbjct: 166 ALCVFYFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTS 225

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN 293
           LI+AY  +G  +EA+ VF  ++    +P L+TYN +++  GK G+ +  +  + D M  +
Sbjct: 226 LITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSS 285

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           GV PD  T+N+L++ C RG L+E A  +F EM   G   D  TYN LLD   K  +   A
Sbjct: 286 GVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREA 345

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
            E++ EM A   +P++VTY+++I  YA+ G LD+A+ + S+M   GI  D  +Y T+LS 
Sbjct: 346 MEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSG 405

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK-ADCVSP 472
           + K G+ + A+ V +EM  +G + +  T+NAL+  +G +G + E+ ++FE++K  +CV P
Sbjct: 406 FEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECV-P 464

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           +++T++TL+ V+ + G+  E   +F+E K+AG   +   ++ LI A  + G  + A+++ 
Sbjct: 465 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIY 524

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             M   G+ P++ TYN+++ A  R    E
Sbjct: 525 RRMLDAGVTPDLSTYNAVLAALARGGLWE 553



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 140/594 (23%), Positives = 280/594 (47%), Gaps = 34/594 (5%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKV-DLAKNI 215
           YT L+    + G + +A+  F    K+ E +  +  L +   ++++ G++G        +
Sbjct: 223 YTSLITAYASNGRYREAVMVF----KKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGL 278

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
            ++  + G    +Y ++ LIS+  R    +EA  VF  MK     P+ VTYNA++D  GK
Sbjct: 279 VDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGK 338

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
                +  +E+  +M  +G  P  +T+NSL++  +R GL + A  L ++MV +GI  D+F
Sbjct: 339 SRRP-REAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVF 397

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TY TLL    K  + D A ++  EM      PN+ T++ +I  +   G   + + +F E+
Sbjct: 398 TYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEI 457

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           K      D V++NT+L+++ + G   E   V KEM+ +G   +  T+N L+  Y + G +
Sbjct: 458 KICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFF 517

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D+   ++ +M    V+P+L TY+ ++   ++GGL++++ ++  E K    K + + Y +L
Sbjct: 518 DQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSL 577

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS-ATTECTVDDVE-RDLGK 573
           + A      VE   +L +E+    I P  V   +++  + +S   TE     +E R+ G 
Sbjct: 578 LHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGF 637

Query: 574 QKESANLDAMCSQDDKD------------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
             +   L+AM S   +             ++++G T +         +  +    +K   
Sbjct: 638 SPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSED 697

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV 681
             +EI+             +KP++++F+ ++ A  R    ++AS +  E++ F      +
Sbjct: 698 ILREIIA----------KGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVI 747

Query: 682 AHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
            +   +     D+++++A+ +   +   +       YN+L D      ++  A 
Sbjct: 748 TYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEAN 801



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 194/408 (47%), Gaps = 42/408 (10%)

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           +++V  + G    A +L +++ + G+  DI+ Y +L+ A     +   A  +  ++  + 
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250

Query: 365 ISPNVVTYSTMIDGYAKAGR-LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
             P ++TY+ +++ Y K G        +   MK  G+  D  +YNT++S   +   +EEA
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEA 310

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
             V +EM+++G   D VTYNALL  YGK  +  E   + ++M+A   +P+++TY++LI  
Sbjct: 311 AEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISA 370

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y++ GL  EAM++  +  + G+K DV  Y+ L+    K G  + A+ + +EM   G +PN
Sbjct: 371 YARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPN 430

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           + T+N++I   G              ++ K  E   +   C  D         T N ++ 
Sbjct: 431 ICTFNALIKMHGNRGNF--------VEMMKVFEEIKI-CECVPDIV-------TWNTLLA 474

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           VFGQ            N    E+    GVF++M +    P   TF+ +++A SRC  F+ 
Sbjct: 475 VFGQ------------NGMDSEVS---GVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQ 519

Query: 664 ASMLLEELRLFDNQV------YGVAHGLLMGYRDNIWVQALSLFDEVK 705
           A  +    R+ D  V      Y      L   R  +W Q+  +  E+K
Sbjct: 520 AMAIYR--RMLDAGVTPDLSTYNAVLAALA--RGGLWEQSEKVLAEMK 563



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 178/375 (47%), Gaps = 38/375 (10%)

Query: 197 SAMISILGRLGK-VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           +A+I + G  G  V++ K   E  + E   + V  ++ L++ +G++G   E   VF  MK
Sbjct: 435 NALIKMHGNRGNFVEMMKVFEEIKICECVPDIV-TWNTLLAVFGQNGMDSEVSGVFKEMK 493

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           R    P   T+N +I A  + G  F   + I+  ML  GV PD  T+N++LA  +RGGLW
Sbjct: 494 RAGFVPERDTFNTLISAYSRCGF-FDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLW 552

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E +  +  EM       +  TY +LL A   G +++    +  E+ +  I P  V   T+
Sbjct: 553 EQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTL 612

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLD-------------------------------- 403
           +  Y+K+  L +    F E++  G   D                                
Sbjct: 613 VLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGF 672

Query: 404 ---RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
                +YN+++ +Y++   FE++  + +E+ + G++ D +++N ++  Y + G+  E  R
Sbjct: 673 TPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASR 732

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F +MK   ++P+++TY+T I  Y+   ++ EA+ + +   +   K +   Y++LID  C
Sbjct: 733 IFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFC 792

Query: 521 KNGLVESAVSLLDEM 535
           K    + A S +  +
Sbjct: 793 KLNRRDEANSFISNL 807



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 141/304 (46%), Gaps = 34/304 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS   R G  D A  I+   L+ G    +  ++A+++A  R G  +++  V   MK 
Sbjct: 505 NTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKD 564

Query: 257 YNLKPNLVTYNAVIDACGKG---------------------GVDFKHVVEIFD--DML-- 291
              KPN +TY +++ A   G                      V  K +V ++   D+L  
Sbjct: 565 GRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTE 624

Query: 292 ---------RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
                      G  PD  T N+++++  R  +      + N +   G    + TYN+L+ 
Sbjct: 625 TERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMY 684

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
              +    + + +I+ E+ AK + P++++++T+I  Y + GR+ +A  +F+EMK  G+  
Sbjct: 685 MYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAP 744

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D ++YNT ++ YA    F EA+ V K M  +  + +  TYN+L+  + K  + DE     
Sbjct: 745 DVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFI 804

Query: 463 EQMK 466
             ++
Sbjct: 805 SNLR 808



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 94/178 (52%), Gaps = 3/178 (1%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           +G+   +   +A++S YGR     +   + N +K     P+L TYN+++    +    F+
Sbjct: 635 QGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTE-HFE 693

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
              +I  +++  G++PD I+FN+++ A C  G + EA+R +F EM   G+  D+ TYNT 
Sbjct: 694 KSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASR-IFAEMKDFGLAPDVITYNTF 752

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           + +    +    A +++  M      PN  TY+++ID + K  R D+A +  S ++ L
Sbjct: 753 IASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLRNL 810



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 35/165 (21%), Positives = 75/165 (45%), Gaps = 40/165 (24%)

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG 572
           + +I  L K G    A SLL ++  +G+  ++  Y S+I A+  +              G
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASN--------------G 234

Query: 573 KQKESANLDAMCSQDDKDVQEAG-----RTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
           + +E+  +        K ++E G      T N I+ V+G++       G   ++      
Sbjct: 235 RYREAVMVF-------KKLEEEGCRPTLITYNVILNVYGKM-------GMPWSK------ 274

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            I G+   M    + P++ T++ ++++C R + +E+A+ + EE++
Sbjct: 275 -IAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMK 318


>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 827

 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 144/490 (29%), Positives = 261/490 (53%), Gaps = 14/490 (2%)

Query: 86  PSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDI 145
           P S   + P+ S R  TR        R K   S R S + ++ L  +     +   L  +
Sbjct: 61  PHSPKFINPNVSIRPRTRISKARDPNRGKPWASHRLSTLGQQVLDSLIDPCFEGSELDKV 120

Query: 146 LKKF-------EFKLCGAD------DYTFLLRELGNRGEWSKAIQCFAFAVKREERKND- 191
           L +        E  L          D   +++ LG   +   A+  F++  +RE+ ++  
Sbjct: 121 LSQLFEYYHKEELSLSSGTWNSLSMDVLGIIKGLGFYKKCDMAMSVFSWVREREDFESVL 180

Query: 192 QGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF 251
              + + +I++LG+ GKV  A +I      +G+   VYA+++LI+AY  +G  ++A+ VF
Sbjct: 181 NCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVF 240

Query: 252 NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
             M+    KP L+TYN +++  GK G+ +  +  +   M  +GV PD  T+N+L++ C R
Sbjct: 241 KKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRR 300

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
           G L+E A  +F EM   G   D  T+NTLLD   K  +   A E++ EM     SP++VT
Sbjct: 301 GSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVT 360

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+++I  YA+ G L +A+ +  +M   GI  D  +Y T+LS + K G  E A+ +  EM 
Sbjct: 361 YNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMR 420

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           ++G + +  T+NAL+  +G +G++ E+ ++FE+++    +P+++T++TL+ V+ + G+  
Sbjct: 421 AAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDS 480

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           E   +F+E K+AG   +   ++ LI A  + G  + A+++   M + G+ P++ +YN+++
Sbjct: 481 EVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVL 540

Query: 552 DAFGRSATTE 561
            A  R    E
Sbjct: 541 AALARGGLWE 550



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 189/395 (47%), Gaps = 37/395 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S   + G  + A  IF      G    +  F+ALI  +G  G   E + VF  ++ 
Sbjct: 397 TTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEI 456

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            N  P++VT+N ++   G+ G+D   V  +F +M R G  P+R TFN+L++  SR G ++
Sbjct: 457 CNCAPDIVTWNTLLAVFGQNGMD-SEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQ 515

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  ++  M+  G+  D+ +YN +L A+ +G   + + ++ AEM      PN +TY +++
Sbjct: 516 QAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLL 575

Query: 377 DGYAKAGRLD-----------------------------------DALNMFSEMKFLGIG 401
             YA +  ++                                   +  + F E+K  G  
Sbjct: 576 HAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKG-S 634

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D  + N +++IY +     +A  +   M  SG      TYN+L+  + +   ++    +
Sbjct: 635 PDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEV 694

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            +++ A  + P+L++Y+T+I  Y + G  K+A +IF   K  GL  DV+ Y+  + +   
Sbjct: 695 LKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAA 754

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           + L E A+ ++  M K G + N  TYNSI+D + +
Sbjct: 755 DSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCK 789



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 224/489 (45%), Gaps = 83/489 (16%)

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL----LAVCSRGGLW---EAAR 319
           +++ID C +G    K + ++F+   +  +     T+NSL    L +    G +   + A 
Sbjct: 105 DSLIDPCFEGSELDKVLSQLFEYYHKEELSLSSGTWNSLSMDVLGIIKGLGFYKKCDMAM 164

Query: 320 NLFNEMVHRGIDQDIFTYNT---LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           ++F+ +  R   + +   +    ++  + K  ++  A  I+  +       +V  Y+++I
Sbjct: 165 SVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLI 224

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR-FEEALLVCKEMESSGI 435
             YA  GR  DA+ +F +M+  G     ++YN +L++Y K+G  + +   +   M+SSG+
Sbjct: 225 TAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGV 284

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  TYN L+    +   Y+E  ++FE+MK    SP+ +T++TL+DVY K    KEAM+
Sbjct: 285 APDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAME 344

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           + +E + +G    +V Y++LI A  ++GL+  A+ L D+M ++GI+P+V TY +++  F 
Sbjct: 345 VLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFE 404

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
           ++   E  +    R  G+ + +     +C            T N +IK+ G         
Sbjct: 405 KAGMDEPAM----RIFGEMRAAGCKPNIC------------TFNALIKMHG--------- 439

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVT---------------------------- 647
               NR R     ++ VF+++      P++VT                            
Sbjct: 440 ----NRGR--FAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 493

Query: 648 -------FSAILNACSRCNSFEDA----SMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQ 696
                  F+ +++A SRC SF+ A      +LE     D   Y      L   R  +W Q
Sbjct: 494 FVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALA--RGGLWEQ 551

Query: 697 ALSLFDEVK 705
           +  +F E+K
Sbjct: 552 SEKVFAEMK 560



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 141/292 (48%), Gaps = 35/292 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS   R G    A  +++  L  G    + +++A+++A  R G  +++  VF  MK 
Sbjct: 502 NTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKD 561

Query: 257 YNLKPNLVTYNAVIDACGKGG---------------------VDFKHVVEI--------- 286
              KPN +TY +++ A                          V  K +V +         
Sbjct: 562 GRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLME 621

Query: 287 ----FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
               F+++ + G  PD  T N+++A+  R  +   A  + N M   G    + TYN+L+ 
Sbjct: 622 TEHAFEELKKKG-SPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMY 680

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
              +    + + E++ E+ AK + P++++Y+T+I  Y + GR+ DA  +FS MK  G+  
Sbjct: 681 MHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVP 740

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           D ++YNT ++ YA    FE+A+ V + M   G +++  TYN+++ GY K  +
Sbjct: 741 DVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSR 792



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 1/168 (0%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
            +A+I+ YGR     +A  + N M      P+L TYN+++    +   +F+   E+  ++
Sbjct: 640 LNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSE-NFERSEEVLKEI 698

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           L  G++PD I++N+++    R G  + A  +F+ M   G+  D+ TYNT + +    +  
Sbjct: 699 LAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLF 758

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           + A  ++  M       N  TY++++DGY K  R  DA+   S +  L
Sbjct: 759 EDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADAIMFVSSLNQL 806


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 251/489 (51%), Gaps = 25/489 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I+  G+ G+   A ++      +G      +++  I A GRSG  +EA+ V   M+ 
Sbjct: 254 NSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMES 313

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P++++Y+A I ACG GG  ++  V++ D+M   GV P+ I FNS +  C +GG WE
Sbjct: 314 QGVTPDVISYDAAIKACGGGG-QWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWE 372

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L  E+   G+  D  ++N+ + A  K  +   A E++ EMPAK + P+ ++Y++ I
Sbjct: 373 KAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAI 432

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +   K G+ + AL +  +M   G+  + +S N  +    + GR++E L + ++M + G+ 
Sbjct: 433 EACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLT 492

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + +TYN+ +   GK G++++   +  +MK   ++P+ +TY++ I   SK G +KEA+ +
Sbjct: 493 PNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVAL 552

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            RE    GL  DV+ Y+A IDA  KNG  E AV LL +M  +G+ PNV+TYNS+I A GR
Sbjct: 553 LREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGR 612

Query: 557 SATTECTVDDV----ERDLGKQKESANLD-AMCSQDD---------KDVQEAGRTDNQII 602
               E  +D +    E  +     S NL  + C +           +++   G T + I 
Sbjct: 613 GGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVIS 672

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
                      G+ +K           LG+   M    + P   ++S  + AC +    E
Sbjct: 673 YTSAIRACNAEGEWEK----------ALGLLNLMGAHGVSPTATSYSLAIEACGKGGRRE 722

Query: 663 DASMLLEEL 671
           +A  L+ E+
Sbjct: 723 EAVCLVREM 731



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 157/654 (24%), Positives = 307/654 (46%), Gaps = 70/654 (10%)

Query: 126 EEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQ-------- 177
           + AL       +   +LG + +  E  +  A  YT  +   G +G+W KA++        
Sbjct: 114 QAALREAATTGKWREALGILDEMKEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQ 173

Query: 178 --------CFAFAVKREERKNDQGKLASAM-------------------ISILGRLGKVD 210
                   C+  A++      DQ ++A ++                   I   GR G+ +
Sbjct: 174 EGVSPNVFCYNSAIE-ACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWE 232

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
               +     + G       ++++I+  G+ G  +EA+SV   M    L P  ++YN  I
Sbjct: 233 RVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAI 292

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
            ACG+ G  +K  VE+   M   GV PD I++++ +  C  GG WE + +L +EM  RG+
Sbjct: 293 RACGRSG-RWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGV 351

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             +   +N+ + A  KG Q + A E++ E+ A  ++P+  ++++ I    K+GR  +AL 
Sbjct: 352 APNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALE 411

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +  EM    +  D +SYN+ +    K G++E AL + ++M + G+  + ++ N  +   G
Sbjct: 412 LLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACG 471

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           ++G++ E   +  QM A  ++PN++TY++ I    KGG +++A+ +  + K+  +  D +
Sbjct: 472 ERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSI 531

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y++ I A  K G  + AV+LL EM  +G+ P+V++Y + IDA+G++   E  V+ + R 
Sbjct: 532 TYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELL-RQ 590

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
           +  +  + N+                T N +IK  G     + G+ +K           L
Sbjct: 591 MPTKGLTPNVI---------------TYNSVIKACG-----RGGEWEK----------AL 620

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL--FDNQVYGVAHGLLMG 688
            + +++ +  + P++++++  ++AC +   +E+A  LL E+        V      +   
Sbjct: 621 DLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRAC 680

Query: 689 YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
             +  W +AL L + +     S  +  Y+   +     G++  A  +V E  +R
Sbjct: 681 NAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQR 734



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 232/451 (51%), Gaps = 9/451 (1%)

Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           ++L++ E +    D   Y   ++  G  G+W  ++        R    N      SA+++
Sbjct: 306 EVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTI-HFNSAIVA 364

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
             G+ G+ + A  +       G      +F++ I+A  +SG  +EA+ +   M    LKP
Sbjct: 365 C-GKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKP 423

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           + ++YN+ I+ACGKGG  ++  +E+   M   G+ P+ I+ N  +  C   G W+    L
Sbjct: 424 DAISYNSAIEACGKGG-QWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLEL 482

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             +M  +G+  ++ TYN+ +    KG Q + A +++A+M    ++P+ +TY++ I   +K
Sbjct: 483 LRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSK 542

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            GR  +A+ +  EM   G+  D +SY   +  Y K G++E A+ + ++M + G+  + +T
Sbjct: 543 RGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVIT 602

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN+++   G+ G++++   + +++K   V+P+L++Y+  I    K G ++EA+ + RE  
Sbjct: 603 YNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMP 662

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             GL  DV+ Y++ I A    G  E A+ LL+ M   G+ P   +Y+  I+A G+    E
Sbjct: 663 AEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRRE 722

Query: 562 ---CTVDDV-ERDLGKQKESANLDAMCSQDD 588
              C V ++ +R L  +  S +L      DD
Sbjct: 723 EAVCLVREMAQRGLSHRNISNSLIVEALGDD 753



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 144/297 (48%), Gaps = 13/297 (4%)

Query: 163 LRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAM-----ISILGRLGKVDLAKNIFE 217
           +R  G RG W + ++          +   QG   + +     I   G+ G+ + A ++  
Sbjct: 467 IRACGERGRWQEGLELL-------RQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLA 519

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                        +++ I+A  + G  +EA+++   M    L P++++Y A IDA GK G
Sbjct: 520 KMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNG 579

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             ++  VE+   M   G+ P+ IT+NS++  C RGG WE A +L  E+    +  D+ +Y
Sbjct: 580 -QWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSY 638

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N  + A  K  + + A +++ EMPA+ ++P+V++Y++ I      G  + AL + + M  
Sbjct: 639 NLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGA 698

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
            G+     SY+  +    K GR EEA+ + +EM   G+    ++ + ++   G   K
Sbjct: 699 HGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNISNSLIVEALGDDAK 755


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 147/520 (28%), Positives = 274/520 (52%), Gaps = 15/520 (2%)

Query: 163 LRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE 222
           LRE    G+W KA+      ++ +  K D    +SA I+  G   + + A  +  +    
Sbjct: 158 LREAKQYGDWRKALDVLDR-MQEQGVKPDSQNYSSA-IAACGNARQWERAVELLASMAAR 215

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    V  +S+ I+A  +    +EA+ +  SMK   +KPN++ Y+A I AC KGG  ++ 
Sbjct: 216 GTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGG-QWET 274

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            V++  +M   G+ PD IT+++++  C++ G WE A  L  EM  +G+  +I TY+ ++ 
Sbjct: 275 AVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIG 334

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A  K  Q + A  ++ EM    ++P+V+TYS+ I   AK G+ ++A+ +  EM   G+  
Sbjct: 335 ACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTP 394

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           + +SY  V+S  AK GR+ EA+ + +EM++ G+  D + Y+A +    +  ++++   + 
Sbjct: 395 NAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLL 454

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +M A  ++PN+++Y++ ID  +K G  K A+++ RE    GL  DV+ YSA+I +    
Sbjct: 455 REMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMG 514

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-D 581
              E A+ L  EM ++GI P+VV+ N+ I+A  +    E  +D     LG+      + D
Sbjct: 515 RQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALD----VLGEMPTMGLVPD 570

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK------ 635
           A+  +   D    G    +II +  ++            R       + G++++      
Sbjct: 571 AISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLR 630

Query: 636 -MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
            M  + + P+VVT+++ +NAC++   +++A++LL ++  F
Sbjct: 631 DMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTF 670



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 289/569 (50%), Gaps = 44/569 (7%)

Query: 182 AVKREERKN--DQGKLASAM--------ISILGRLGKVDLAKNIFETALNEGYGNTVYAF 231
           A+ R++RK+  D+G   + M        +    + G    A ++ +    +G       +
Sbjct: 130 ALPRQQRKSKADKGGRQAGMPMSHLKATLREAKQYGDWRKALDVLDRMQEQGVKPDSQNY 189

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           S+ I+A G +   + A+ +  SM      P+++TY++ I AC K    +K  V +   M 
Sbjct: 190 SSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACAKVS-RWKEAVGLLRSMK 248

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
             GV+P+ I +++ ++ C +GG WE A +L  EM   G+  D+ TY+T++DA  K  Q +
Sbjct: 249 GQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWE 308

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            AF ++ EMP K +  N++TYS +I   AK G+ ++A+ +  EM+  G+  D ++Y++ +
Sbjct: 309 PAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTI 368

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           S  AK G++EEA+ + +EM   G+  +A++Y  ++    K+G++ E   + ++M+A  V 
Sbjct: 369 SACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVP 428

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P+++ YS  ID  ++   +++A+ + RE    GL  +V+ Y++ IDA  K G  + AV L
Sbjct: 429 PDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVEL 488

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
           L EM   G+ P+V+TY+++I          C        +G+Q E A LD       +++
Sbjct: 489 LREMPAHGLAPDVITYSAVI--------ASCA-------MGRQWEEA-LDLF-----REM 527

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
           Q  G T + ++     + A   G   +E          L V  +M  + + P+ +++   
Sbjct: 528 QRQGITPD-VVSCNTAINACAQGGWWEE---------ALDVLGEMPTMGLVPDAISYRTA 577

Query: 652 LNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDS 709
           ++AC++ + +++   LL E+         +++   M     D +W +AL L  ++  +  
Sbjct: 578 IDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGL 637

Query: 710 STASAFYNALTDMLWHFGQKRGAQLVVLE 738
           S     YN+  +     G+ + A +++ +
Sbjct: 638 SPDVVTYNSAINACAKGGRWKEATVLLRQ 666



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 216/419 (51%), Gaps = 15/419 (3%)

Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA----- 196
           D+LK+        D   Y+ ++     RG+W  A +              +G +A     
Sbjct: 277 DLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLM-------EMPTKGVVANIITY 329

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    + G+ + A  +       G    V  +S+ ISA  + G  +EA+ +   M  
Sbjct: 330 SIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPM 389

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN ++Y  VI AC K G  ++  +++  +M  +GV PD I +++ +  C++   WE
Sbjct: 390 EGVTPNAISYGIVISACAKRG-RWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWE 448

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L  EM   G+  ++ +YN+ +DA  K  +  +A E++ EMPA  ++P+V+TYS +I
Sbjct: 449 QALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVI 508

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
              A   + ++AL++F EM+  GI  D VS NT ++  A+ G +EEAL V  EM + G+ 
Sbjct: 509 ASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLV 568

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            DA++Y   +    K  ++ E+  +  +M    ++P+ ++Y   +   S  GL+KEA+ +
Sbjct: 569 PDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVL 628

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            R+    GL  DVV Y++ I+A  K G  + A  LL +M   G+ P+V ++N+ IDA G
Sbjct: 629 LRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACG 687



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 169/344 (49%), Gaps = 11/344 (3%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCF----AFAVKREERKNDQGKLASAMISILGRLGKVDL 211
           A  Y  ++     RG W +AI       A  V  +          SA I    +  + + 
Sbjct: 396 AISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINY------SAAIDACAQASRWEQ 449

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  +       G    V ++++ I A  ++G  + A+ +   M  + L P+++TY+AVI 
Sbjct: 450 ALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIA 509

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           +C  G   ++  +++F +M R G+ PD ++ N+ +  C++GG WE A ++  EM   G+ 
Sbjct: 510 SCAMG-RQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLV 568

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  +Y T +DA  KG +     +++ EM    ++P+ ++Y   +   +  G   +AL +
Sbjct: 569 PDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVL 628

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
             +M  +G+  D V+YN+ ++  AK GR++EA ++ ++M + G+  D  ++NA +   G 
Sbjct: 629 LRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGN 688

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             ++     +  +M+A  VSPN  TY T +    + G   + MQ
Sbjct: 689 GDQWGTAVEVLFEMRALGVSPNEATYLTAMYACKRCGEKDDWMQ 732


>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 804

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/407 (33%), Positives = 232/407 (57%), Gaps = 1/407 (0%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKN 214
           A D   +++ LG   +   A+  F +        N     A   +I ILG+ G+V  A +
Sbjct: 120 ASDILGIIKALGFSNKCDLALAVFHWVRTNNSNTNLFSSSAIPVIIKILGKAGRVSSAAS 179

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +     N+G    VYA++ LI+AY  SG  ++A+++FN M++    P L+TYN V++  G
Sbjct: 180 LLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYG 239

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K G+ + +V  + + M   GV PD  T+N+L++ C RG L+E A +LF +M   G   D 
Sbjct: 240 KMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDK 299

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TYN LLD   K  +   A +++ EM A   SP  VTY+++I  YAK G L++AL++ ++
Sbjct: 300 VTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQ 359

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   GI  D  +Y T+LS + K G+ + A+ V  EM + G + +  T+NAL+  +G +GK
Sbjct: 360 MVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGK 419

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
           + E+ ++F+ +K    SP+++T++TL+ V+ + G+  +   IF+E K+AG  A+   ++ 
Sbjct: 420 FAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNT 479

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           LI A  + G  + A+++   M + G+ P++ TYN+++ A  R    E
Sbjct: 480 LISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWE 526



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/516 (24%), Positives = 252/516 (48%), Gaps = 39/516 (7%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKV-DLAKNIFE 217
           YT L+    + G +  A+  F     +++  N      + ++++ G++G        + E
Sbjct: 196 YTCLINAYSSSGRYRDAVNLFN--KMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVE 253

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
              + G    +Y ++ LIS   R    +EA+ +F  MK     P+ VTYNA++D  GK  
Sbjct: 254 AMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSR 313

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              +  +++  +M  NG  P  +T+NSL++  ++GGL E A +L  +MVH+GI  D+FTY
Sbjct: 314 RP-QEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTY 372

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TLL    K  + D A ++  EM A    PN+ T++ +I  +   G+  + + +F ++K 
Sbjct: 373 TTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKL 432

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
                D V++NT+L+++ + G   +   + KEM+ +G   +  T+N L+  Y + G +D+
Sbjct: 433 CNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQ 492

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +++ M    V P+L TY+ ++   ++GGL++++ ++  E +    K + + YS+L+ 
Sbjct: 493 AMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLH 552

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
           A      +E   +  +E+    +  + V   +++    +S            DL  + E 
Sbjct: 553 AYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKS------------DLLIETER 600

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFG--QLVAEKAGQGKKENRCRQEILCILGVFQK 635
           A L+        D+     T N ++ ++G  Q+VA+             EIL        
Sbjct: 601 AFLELRRRGISPDIT----TLNAMLSIYGRKQMVAKA-----------HEILNF------ 639

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           MH+ +  P++ T+++++   SR  +F+ +  +L E+
Sbjct: 640 MHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREV 675



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 199/379 (52%), Gaps = 4/379 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S   + GK D A  +F      G    +  F+ALI  +G  G   E + VF+ +K 
Sbjct: 373 TTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKL 432

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            N  P++VT+N ++   G+ G+D   V  IF +M R G   +R TFN+L++  SR G ++
Sbjct: 433 CNCSPDIVTWNTLLAVFGQNGMD-SQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFD 491

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  ++  M+  G+  D+ TYN +L A+ +G   + + +++AEM      PN ++YS+++
Sbjct: 492 QAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLL 551

Query: 377 DGYAKAGRLDDALNMFSEMKFLG-IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
             YA  G+  + +N F+E  + G +    V   T++ + +K     E      E+   GI
Sbjct: 552 HAYAN-GKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGI 610

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  T NA+L  YG++    +   +   M     +P+L TY++L+ +YS+   ++++ +
Sbjct: 611 SPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEE 670

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I RE  + G+K D + Y+ +I A C+NG ++ A  +  EM    + P+VVTYN+ I  + 
Sbjct: 671 ILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYA 730

Query: 556 RSATTECTVDDVERDLGKQ 574
             +     + DV R + KQ
Sbjct: 731 ADSMFAEAI-DVVRYMIKQ 748



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 139/337 (41%), Gaps = 38/337 (11%)

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++ I  K GR   A  +   +++ G+  D   Y  L+  Y   G+Y +   +F +M+ D 
Sbjct: 164 IIKILGKAGRVSSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDG 223

Query: 470 VSPNLLTYSTLIDVYSKGGL-YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            +P L+TY+ +++VY K G+ +     +    +  G+  D+  Y+ LI    +  L E A
Sbjct: 224 CNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEA 283

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           V L  +M  EG  P+ VTYN+++D FG+S                ++    +  +   + 
Sbjct: 284 VHLFQQMKLEGFTPDKVTYNALLDVFGKS----------------RRPQEAMKVLQEMEA 327

Query: 589 KDVQEAGRTDNQIIKVF--GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
                   T N +I  +  G L+ E                  L +  +M    IKP+V 
Sbjct: 328 NGFSPTSVTYNSLISAYAKGGLLEEA-----------------LDLKTQMVHKGIKPDVF 370

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDN--IWVQALSLFDEV 704
           T++ +L+   +    + A  +  E+R    +        L+    N   + + + +FD++
Sbjct: 371 TYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDI 430

Query: 705 KLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKR 741
           KL + S     +N L  +    G       +  E KR
Sbjct: 431 KLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKR 467



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 3/167 (1%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    +   +A++S YGR     +A  + N M      P+L TYN+++    +   +F+ 
Sbjct: 609 GISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSE-NFQK 667

Query: 283 VVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             EI  ++L  G++PDRI++N+++ A C  G + EA+R +F+EM    +  D+ TYNT +
Sbjct: 668 SEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASR-IFSEMKDSALVPDVVTYNTFI 726

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
                 +    A +++  M  +   P+  TY++++D Y K  +  +A
Sbjct: 727 ATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEA 773


>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
 gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
          Length = 773

 Score =  245 bits (626), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 189/744 (25%), Positives = 334/744 (44%), Gaps = 109/744 (14%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           D++ + RE   R +W +A++ F +  +++  K                            
Sbjct: 48  DFSLIFREFAARSDWHRALRLFKYMQRQQWCKP--------------------------- 80

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                    T + ++ +I   GR G  ++   +F  M   ++K N+  + A+I+A G+ G
Sbjct: 81  ---------TEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNG 131

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL-WEAARNLFNEMVHRGIDQDIFT 336
             ++  + +   M +  V+P+ IT+N++L  CS+GGL WE   NLF +M H GI  D+ T
Sbjct: 132 -QYEASLHLLARMKKERVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLIT 190

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YNTLL A      ++ A  +   M    +  + VTY +++D +A + +L     +  EM+
Sbjct: 191 YNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREME 250

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G   D   YN+++  YA  G    A  V K+M+  G   D  TY+ LL  YG QG ++
Sbjct: 251 DEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFE 310

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           +VR +F  MK     P + TY++LI V+ +GG ++E++ +F +   +G+K D   YSAL+
Sbjct: 311 QVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALL 370

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
               + GL   A  +   M      P++     +I ++G+ A  +  +    R       
Sbjct: 371 SVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYR-----IR 425

Query: 577 SANLDAMCSQDDKDVQ---------EAGRT---------------DNQIIKVFGQL---- 608
            A LD   S  D  +Q         EAG T                N +++ + ++    
Sbjct: 426 EAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHD 485

Query: 609 --------VAEKAGQGKKENRCRQEIL---CILGVFQKMHK--LKIK-----PNVVTFSA 650
                   + +K G  + + R  + +L   C +G+ ++  +  + IK     P    +  
Sbjct: 486 EALEFFSELQQKEG-SEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVPGARVYCL 544

Query: 651 ILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDN--IWVQALSLFDEVKLMD 708
           +L+ C R + ++ A+ LL+E+ +    ++ V  G++ G  D    W      FD +KL D
Sbjct: 545 LLSLCVRRSKWDYATQLLDEM-IAAGGLHQVVVGIVRGTYDADFSWQVVEYAFDGLKLRD 603

Query: 709 SSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVW-------ENVWSESCLDLHLMSS 761
              +  FYNAL ++L +  QK  A  V+ +  +R  +         VWS   +++H MS+
Sbjct: 604 MEESMDFYNALVELLVYCNQKARAARVLADAMQRGAFPEAFIKTRRVWS---VNVHRMSA 660

Query: 762 GAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWG--KHSKVVGDGALRRAVEVLLTGMG 819
           GA    +  W  ++     E  +LP + SI+   G  +  + V D  + + V+  L    
Sbjct: 661 GATVTALSTWFNDLQ----ECEKLPFMTSIVVSCGDIEDHRKVEDLPVAKVVQAFLKHYA 716

Query: 820 APFWVANCNLGRFISTGPMVASWL 843
           AP   A+ N GR +  G  +  WL
Sbjct: 717 APLETASWNEGRIVCKGEALKPWL 740


>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
 gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
          Length = 773

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 189/744 (25%), Positives = 334/744 (44%), Gaps = 109/744 (14%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           D++ + RE   R +W +A++ F +  +++  K                            
Sbjct: 48  DFSLIFREFAARSDWHRALRLFKYMQRQQWCKP--------------------------- 80

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                    T + ++ +I   GR G  ++   +F  M   ++K N+  + A+I+A G+ G
Sbjct: 81  ---------TEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNG 131

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL-WEAARNLFNEMVHRGIDQDIFT 336
             ++  + +   M +  V+P+ IT+N++L  CS+GGL WE   NLF +M H GI  D+ T
Sbjct: 132 -QYEASLHLLARMKKEQVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLIT 190

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YNTLL A      ++ A  +   M    +  + VTY +++D +A + +L     +  EM+
Sbjct: 191 YNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREME 250

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G   D   YN+++  YA  G    A  V K+M+  G   D  TY+ LL  YG QG ++
Sbjct: 251 DEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFE 310

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           +VR +F  MK     P + TY++LI V+ +GG ++E++ +F +   +G+K D   YSAL+
Sbjct: 311 QVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALL 370

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
               + GL   A  +   M      P++     +I ++G+ A  +  +    R       
Sbjct: 371 SVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYR-----IR 425

Query: 577 SANLDAMCSQDDKDVQ---------EAGRT---------------DNQIIKVFGQL---- 608
            A LD   S  D  +Q         EAG T                N +++ + ++    
Sbjct: 426 EAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHD 485

Query: 609 --------VAEKAGQGKKENRCRQEIL---CILGVFQKMHK--LKIK-----PNVVTFSA 650
                   + +K G  + + R  + +L   C +G+ ++  +  + IK     P    +  
Sbjct: 486 EALEFFSELQQKEG-SEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVPGARVYCL 544

Query: 651 ILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDN--IWVQALSLFDEVKLMD 708
           +L+ C R + ++ A+ LL+E+ +    ++ V  G++ G  D    W      FD +KL D
Sbjct: 545 LLSLCVRRSKWDYATQLLDEM-IAAGGLHQVVVGIVRGTYDADFSWQVVEYAFDGLKLRD 603

Query: 709 SSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVW-------ENVWSESCLDLHLMSS 761
              +  FYNAL ++L +  QK  A  V+ +  +R  +         VWS   +++H MS+
Sbjct: 604 MEESMDFYNALVELLVYCNQKARAARVLADAMQRGAFPEAFIKTRRVWS---VNVHRMSA 660

Query: 762 GAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWG--KHSKVVGDGALRRAVEVLLTGMG 819
           GA    +  W  ++     E  +LP + SI+   G  +  + V D  + + V+  L    
Sbjct: 661 GATVTALSTWFNDLQ----ECEKLPFMTSIVVSCGDIEDHRKVEDLPVAKVVQAFLKHYA 716

Query: 820 APFWVANCNLGRFISTGPMVASWL 843
           AP   A+ N GR +  G  +  WL
Sbjct: 717 APLETASWNEGRIVCKGEALKPWL 740


>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 794

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 231/405 (57%), Gaps = 1/405 (0%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKND-QGKLASAMISILGRLGKVDLAKNIF 216
           D   +++ LG   ++  A+  F F   R +R +   G + + ++SILG+ G+V  A ++ 
Sbjct: 108 DILGIIKGLGFNNKFDLALSLFDFIRTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLL 167

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
                +G+   VY +++LI+AY  +   ++A+ VF  MK    +P L+TYNA+++  GK 
Sbjct: 168 HNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKM 227

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G+ +  ++ +  DM  +G+ PD  T+N+L++ C  G L+E A +LF E+   G   D  T
Sbjct: 228 GMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVT 287

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN LLD   K  +   A E++ +M + +  P+VVTY++++  Y + G L+DAL +  +M 
Sbjct: 288 YNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMV 347

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             GI  D  +Y T+LS +   G+ E A+ V +EM   G + +  T+NAL+  YG +GK++
Sbjct: 348 DKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFE 407

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E+ ++F+++K    SP+++T++TL+ V+ + G+  E   +F E K++    +   ++ LI
Sbjct: 408 EMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLI 467

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            A  + G  + A++    M + G+ P++ TYN+++    R    E
Sbjct: 468 SAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWE 512



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 148/564 (26%), Positives = 271/564 (48%), Gaps = 79/564 (14%)

Query: 149 FEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLG 207
           FE  + G   YT L+    N  ++  A++ F    K +E   +   +  +A++++ G++G
Sbjct: 175 FEVDVYG---YTSLITAYANNKKYRDALKVFG---KMKEVGCEPTLITYNAILNVYGKMG 228

Query: 208 KVDLAKNI--FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
            +  AK I   +     G    +  ++ LIS        +EA+ +F  +K    +P+ VT
Sbjct: 229 -MPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVT 287

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           YNA++D  GK     K  +E+   M  N  +P  +T+NSL++   RGGL E A  L  +M
Sbjct: 288 YNALLDVYGKSRRP-KEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKM 346

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V +GI  D++TY TLL       + +LA E+  EM      PN+ T++ +I  Y   G+ 
Sbjct: 347 VDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKF 406

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           ++ + +F E+K      D V++NT+L+++ + G   E   V +EM+ S    +  T+N L
Sbjct: 407 EEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTL 466

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +  YG+ G +D+    +++M    VSP+L TY+ ++   ++GGL++++ ++  E K  G 
Sbjct: 467 ISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGC 526

Query: 506 KADVVLYSALIDALCKNG-----------------------------LVESAVSLLD--- 533
           K + V YS+L+ A   NG                             LV S V LL    
Sbjct: 527 KPNEVTYSSLLHAYA-NGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETE 585

Query: 534 ----EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
               E  K GI P+V T N+++  +GR           ++ + K  E  N          
Sbjct: 586 RAFLEFRKRGISPDVTTSNAMLSIYGR-----------KKMVPKANEILNF--------- 625

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
            + E+G T +  +  +  L+   +   + EN  + E      +F+++    I+P+V++++
Sbjct: 626 -MYESGLTLS--LTSYNSLMYMYS---RTENFHKSE-----QIFREILDKGIEPDVISYN 674

Query: 650 AILNACSRCNSFEDASMLLEELRL 673
            ++ A  R +  ++A  ++EE+++
Sbjct: 675 IVIYAYCRNDMMDEAKRIIEEMKV 698



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 211/418 (50%), Gaps = 16/418 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S     GK +LA  +FE     G    +  F+ALI  YG  G  +E + VF  +K 
Sbjct: 359 TTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKV 418

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++VT+N ++   G+ G+D   V  +F++M R+   P+R TFN+L++   R G ++
Sbjct: 419 CKCSPDIVTWNTLLAVFGQNGMD-SEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFD 477

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A   +  M+  G+  D+ TYN +L  + +G   + + +++AEM      PN VTYS+++
Sbjct: 478 QAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLL 537

Query: 377 DGYAKAGRLDDALNMFSEMKFLG-IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
             YA  GR  + +N  +E  + G I    V   T++ + +K+    E      E    GI
Sbjct: 538 HAYAN-GREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGI 596

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  T NA+L  YG++    +   +   M    ++ +L +Y++L+ +YS+   + ++ Q
Sbjct: 597 SPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQ 656

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           IFRE    G++ DV+ Y+ +I A C+N +++ A  +++EM      P+VVTYN+ I A+ 
Sbjct: 657 IFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYA 716

Query: 556 RSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKD-----VQEAGRTDNQI 601
             +     + DV R + KQ    N       +D  C    +D     VQ  G  D QI
Sbjct: 717 ADSMFVEAI-DVIRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQNLGDLDPQI 773



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 190/390 (48%), Gaps = 39/390 (10%)

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            ++  + K  ++  A  ++  + A     +V  Y+++I  YA   +  DAL +F +MK +
Sbjct: 149 VIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEV 208

Query: 399 GIGLDRVSYNTVLSIYAKLGR-FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           G     ++YN +L++Y K+G  + + + + ++M+  G+  D  TYN L+        Y+E
Sbjct: 209 GCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEE 268

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +FE++K     P+ +TY+ L+DVY K    KEAM++ ++ +    +  VV Y++L+ 
Sbjct: 269 ALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVS 328

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQK 575
           A  + GL+E A+ L  +M  +GI+P+V TY +++  F  +   E  ++  E  R +G + 
Sbjct: 329 AYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKP 388

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC------- 628
                +A+     K   + G+ + +++KVF ++         K  +C  +I+        
Sbjct: 389 NICTFNALI----KMYGDRGKFE-EMVKVFKEI---------KVCKCSPDIVTWNTLLAV 434

Query: 629 ---------ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA----SMLLEELRLFD 675
                    + GVF++M + +  P   TF+ +++A  RC SF+ A      +LE     D
Sbjct: 435 FGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPD 494

Query: 676 NQVYGVAHGLLMGYRDNIWVQALSLFDEVK 705
              Y      L   R  +W Q+  +  E+K
Sbjct: 495 LSTYNAVLATLA--RGGLWEQSEKVLAEMK 522



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 77/152 (50%), Gaps = 3/152 (1%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           ++AM+SI GR   V  A  I       G   ++ ++++L+  Y R+    ++  +F  + 
Sbjct: 603 SNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREIL 662

Query: 256 RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
              ++P++++YN VI A C    +D      I ++M      PD +T+N+ +A  +   +
Sbjct: 663 DKGIEPDVISYNIVIYAYCRNDMMD--EAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSM 720

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           +  A ++   M+ +G   +  TYN+++D  CK
Sbjct: 721 FVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCK 752


>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 410

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/392 (34%), Positives = 216/392 (55%), Gaps = 1/392 (0%)

Query: 163 LRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE 222
           ++EL  RG   +A+Q F F  +  E +  +    + +ISILGR GK+ LA+ IFE     
Sbjct: 1   MKELEIRGARRQALQVFRFLQEHLEYELKEHNCVT-IISILGREGKLGLAREIFEGMSKA 59

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G   +V+A++AL+S Y + G  +EA ++F +MK     PN++TYN +I+AC K       
Sbjct: 60  GVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPD 119

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           +V +F++M + GVQP+ IT+N ++  C    L++ A  +  EM       ++ +Y T+++
Sbjct: 120 LVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMIN 179

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           ++ +  ++D A E+  EM     SPN  TY++++  YA+ GR + A+ +F  M+  G   
Sbjct: 180 SLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIP 239

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D  +YNTV+ +  + G F EA  V  EM+  G   D VTYN +L  Y K  +    R + 
Sbjct: 240 DLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLL 299

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           + MK    +P+L TY+ L+D   K G   EAMQIF E K AG   ++V +SALI+   + 
Sbjct: 300 KTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRL 359

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           G  E A     EM   G  PN   Y  +++++
Sbjct: 360 GYFEEAERAWVEMRATGCVPNATAYCGLMNSY 391



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 175/320 (54%), Gaps = 9/320 (2%)

Query: 245 QEAISVFNSMKR---YNLKP-NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
           ++A+ VF  ++    Y LK  N VT  +++   GK G+      EIF+ M + GV P   
Sbjct: 11  RQALQVFRFLQEHLEYELKEHNCVTIISILGREGKLGL----AREIFEGMSKAGVAPSVH 66

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA-QMDLAFEIMAE 359
            + +LL+  ++ GL + A  LF  M  +G   ++ TYNTL++A  K A ++     +  E
Sbjct: 67  AYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEE 126

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M    + PN +TY+ M++        D A  +  EMK +    + +SY T+++   + GR
Sbjct: 127 MKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGR 186

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            +EA+ + +EM+  G   ++ TYN+LL  Y ++G+Y++   +F  M+ +   P+L TY+T
Sbjct: 187 LDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNT 246

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +ID+  +GGL+ EA  +F E ++ G   D V Y+ ++DA  K      A  LL  M + G
Sbjct: 247 VIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAG 306

Query: 540 IRPNVVTYNSIIDAFGRSAT 559
             P++ TYN ++DA G++ +
Sbjct: 307 CTPDLWTYNILLDAAGKAGS 326



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 54/367 (14%)

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+I    + G+L  A  +F  M   G+     +Y  +LS YAK G  +EA  + + M+  
Sbjct: 35  TIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEK 94

Query: 434 GIRKDAVTYNALLGGYGKQG-KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           G   + +TYN L+    K+  +  ++  +FE+MK   V PN +TY+ +++      L+  
Sbjct: 95  GCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDT 154

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A QI +E K      +V+ Y+ +I++L ++G ++ AV L +EM + G  PN  TYNS++ 
Sbjct: 155 ASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLK 214

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMC---SQDDKDVQEAGRTDNQIIKVFGQ-- 607
           A+ R    E                    AMC     +D+       T N +I + G+  
Sbjct: 215 AYAREGRYE-------------------KAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGG 255

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
           L AE                   GVF +M +    P+ VT++ +L+A S+ +    A  L
Sbjct: 256 LFAEAE-----------------GVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDL 298

Query: 668 LEELR-------LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALT 720
           L+ ++       L+   +   A G     +     +A+ +F E+K    S     ++AL 
Sbjct: 299 LKTMKRAGCTPDLWTYNILLDAAG-----KAGSASEAMQIFHELKAAGHSPNLVSFSALI 353

Query: 721 DMLWHFG 727
           +M    G
Sbjct: 354 NMYGRLG 360


>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
          Length = 784

 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 154/517 (29%), Positives = 265/517 (51%), Gaps = 44/517 (8%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           LA+A I ++ R G++  A  + + A     G    A++AL+SA+ R+G  ++A++VF  M
Sbjct: 144 LATA-IRVMARAGRLAEASALLDAAPGPDAG----AYTALVSAFSRAGRFRDAVAVFRRM 198

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               ++P +VTYN V+    K  V +K VVE+   M  +GV PDR T+N+L++ C R  L
Sbjct: 199 VDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRAL 258

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           ++ A  +F+EM   G + D  T+N+LLD   K  + D A E++ EM      P+VVTY++
Sbjct: 259 YKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNS 318

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I  Y K G L+ A+ +  EM+  GI  D V+Y T++S   + G+ + A++   EM  +G
Sbjct: 319 LISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 378

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
            + +  TYNAL+  +G +GK+ E+  +F+++++    P+++T++TL+ V+ + GL  E  
Sbjct: 379 CKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVS 438

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +F+E K+AG   +   Y +LI +  + GL + A+ +   M + GI P+V TYN+++ A 
Sbjct: 439 GVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSAL 498

Query: 555 GRSATTE-------------CTVDDVERD--LGKQKESANLDAMCSQDDKDVQEAGRTDN 599
            R    E             C  D+      L     +  LD M +  D    E     N
Sbjct: 499 ARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHN 558

Query: 600 QII--------KVFGQLVAEKAGQGKKENRCRQEI------LCILG----------VFQK 635
            ++        KV     AEKA    ++ RC  +I      + I G          +   
Sbjct: 559 WLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSL 618

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           M +  I  +  T++++++  SR    E    +L E++
Sbjct: 619 MKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIK 655



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 221/440 (50%), Gaps = 9/440 (2%)

Query: 122 SVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGAD----DYTFLLRELGNRGEWSKAIQ 177
           SVV   +L  ++++ +D +    +  K E ++ G       YT L+  L   G+   AI 
Sbjct: 312 SVVTYNSL--ISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIV 369

Query: 178 CFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISA 237
            +   V+   + N      +A+I + G  GK      +F+   + G+   +  ++ L++ 
Sbjct: 370 EYDEMVRNGCKPNLC--TYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAV 427

Query: 238 YGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP 297
           +G++G   E   VF  MK+    P   TY ++I +  + G+ F   ++I+  M+  G+ P
Sbjct: 428 FGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL-FDLAMQIYKRMMEAGIYP 486

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
           D  T+N++L+  +RGG WE A  LF EM  R    D ++Y++LL A     ++D    + 
Sbjct: 487 DVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALS 546

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
            ++ ++ I P+     T++   +K   L +A   F E++     LD    N ++SIY K 
Sbjct: 547 DDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKN 606

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
               +   +   M+ S I   A TYN+L+  Y + G  ++   +  ++K+  V P+  +Y
Sbjct: 607 RMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSY 666

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           +T+I  Y + G  KEA ++F E K +GLK DVV Y+  + +   N + E A+ L+  M  
Sbjct: 667 NTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVT 726

Query: 538 EGIRPNVVTYNSIIDAFGRS 557
           +G +PN  TYNSI++ + R+
Sbjct: 727 QGCKPNERTYNSIVEGYCRN 746



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 195/371 (52%), Gaps = 1/371 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS L R GK+D A   ++  +  G    +  ++ALI  +G  G   E ++VF+ ++ 
Sbjct: 352 TTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRS 411

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++VT+N ++   G+ G+D   V  +F +M + G  P+R T+ SL++  SR GL++
Sbjct: 412 AGFVPDIVTWNTLLAVFGQNGLD-SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 470

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  ++  M+  GI  D+ TYN +L A+ +G + + A ++ AEM  ++  P+  +YS+++
Sbjct: 471 LAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 530

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             YA A RLD    +  ++    I        T++ + +K+    EA     E+      
Sbjct: 531 HAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCS 590

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D    NA++  YGK     +V ++   MK   ++ +  TY++L+ +YS+ G  ++   I
Sbjct: 591 LDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENI 650

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             E K +G++ D   Y+ +I A  + G ++ A  L  EM   G++P+VVTYN  + ++  
Sbjct: 651 LTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVS 710

Query: 557 SATTECTVDDV 567
           ++  E  ++ V
Sbjct: 711 NSMFEEAIELV 721



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 136/297 (45%), Gaps = 36/297 (12%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++IS   R G  DLA  I++  +  G    V  ++A++SA  R G  ++A  +F  M+  
Sbjct: 458 SLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEER 517

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR-GGLWE 316
           + KP+  +Y++++ A          +  + DD+    ++P      +L+ V S+   L E
Sbjct: 518 DCKPDEYSYSSLLHAYANAK-RLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAE 576

Query: 317 AAR--------------NLFNEMV--------------------HRGIDQDIFTYNTLLD 342
           A +              N+ N MV                       I+    TYN+L+ 
Sbjct: 577 AEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMH 636

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
              +    +    I+ E+ +  + P+  +Y+T+I  Y + G++ +A  +FSEMK  G+  
Sbjct: 637 MYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKP 696

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           D V+YN  +  Y     FEEA+ + + M + G + +  TYN+++ GY + GK  + +
Sbjct: 697 DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 753



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 129/276 (46%), Gaps = 9/276 (3%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGN--RGEWSKAIQCFAFAVKREERKNDQGKLASAMI 200
           +  + E + C  D+Y++  LL    N  R +  KA+    ++    ER      L   ++
Sbjct: 510 LFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYS----ERIEPHNWLVKTLV 565

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
            +  ++  +  A+  F     +     +   +A++S YG++   ++   + + MK   + 
Sbjct: 566 LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAIN 625

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
            +  TYN+++    + G D +    I  ++  +GV+PDR ++N+++    R G  + A  
Sbjct: 626 LSAATYNSLMHMYSRLG-DCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASR 684

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           LF+EM   G+  D+ TYN  + +    +  + A E++  M  +   PN  TY+++++GY 
Sbjct: 685 LFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYC 744

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           + G+L DA    S +  L  G  +     +  + AK
Sbjct: 745 RNGKLTDAKIFVSNLPQLHPGYSKQEQQNLFEVLAK 780



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 40/207 (19%)

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV-ESAVS 530
           P+   Y+ L+  +S+ G +++A+ +FR    +G++  +V Y+ ++    K  +  +  V 
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCS---Q 586
           L+  M + G+ P+  TYN++I    R A                KE+A + D M +   +
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRAL--------------YKEAAQVFDEMKASGFE 275

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
            DK       T N ++ V+G           K  R  + I     V Q+M ++   P+VV
Sbjct: 276 PDK------VTFNSLLDVYG-----------KARRHDEAI----EVIQEMERVGCPPSVV 314

Query: 647 TFSAILNACSRCNSFEDASMLLEELRL 673
           T+++++++  +    E A  L +E+ +
Sbjct: 315 TYNSLISSYVKDGLLEQAVALKQEMEV 341


>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
 gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
          Length = 823

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 164/609 (26%), Positives = 302/609 (49%), Gaps = 21/609 (3%)

Query: 127 EALHHVTAFARDDVSLGDILKKFEF---KLCGAD-DYTFLLRELGNRGEWSKAIQCFAFA 182
           EA H + A         D  +  EF   +L   D +  + ++ LG +G+W KA++ F + 
Sbjct: 108 EAAHSLLASISKQEDSSDATELLEFIAGELVLTDSELVYFVKALGRQGKWKKALEVFEW- 166

Query: 183 VKREERKNDQGKLASAMISILGRLGKVDLAKNIFET-ALNEGYGNTVYAFSALISAYGRS 241
           +++ +    +G   ++++S+LG   ++  A  +FE+   +E Y   VYA+++LIS   R+
Sbjct: 167 IRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRA 226

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
               E I++F +M+R   + N VTYN ++D  GK G  +  +  +F +M    + PD  T
Sbjct: 227 RRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYT 286

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           +N+++  C +    + A  LF EM   G   +  TYN LLD   KG     A E++ EM 
Sbjct: 287 YNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEME 346

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
           A  ISPN+VTY+ +I  YA+AG  D+A  +   +   G+  D  +Y T++S + +  R+E
Sbjct: 347 AAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYE 406

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           +AL    EM  +    + VTYN L+  YG+  K D++ ++F+ M+    +P+L+T+++L+
Sbjct: 407 KALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLL 466

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
             +   G+  E   +FRE K+AG    V  ++ LI+   + G V+ +V +   + + G++
Sbjct: 467 KSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQ 526

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
           P V T+ +++ +  R    +   + V +++ +      L   C               Q+
Sbjct: 527 PTVPTFAALMASLAREGRWQ-QCEKVSQEMAEA--GLQLSDACHAGLIHSYANSGQFFQL 583

Query: 602 IKVFGQLVAEKAGQGKKENRCRQEIL--CILGV-------FQKMHKLKIKPNVVTFSAIL 652
            K   +L  + A Q      C+  +L  C  G+         +++     P++  F+A++
Sbjct: 584 RKYIDEL-EKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMI 642

Query: 653 NACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDSS 710
           + C++    E A  LLEE+R    +  GV +  LM    R+ ++ +A  +  E++    +
Sbjct: 643 SMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKA 702

Query: 711 TASAFYNAL 719
                YN L
Sbjct: 703 PNLITYNTL 711



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 157/650 (24%), Positives = 277/650 (42%), Gaps = 142/650 (21%)

Query: 151 FKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVD 210
           FKL G    + +L  LGN  +   A++ F  ++K++E  +      +++ISIL R  + D
Sbjct: 173 FKLRGVATAS-ILSVLGNHEQLPAALELFE-SLKQDESYSLDVYAYTSLISILSRARRFD 230

Query: 211 LAKNIFETALNEGY-GNTV-----------------------------------YAFSAL 234
               +FET   EG  GN V                                   Y ++ +
Sbjct: 231 EGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTM 290

Query: 235 ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG 294
           I+A  ++ +CQEA+ +F  MK     PN VTYNA++D  GKGG+  K   E+  +M   G
Sbjct: 291 ITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMH-KEASELLVEMEAAG 349

Query: 295 VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAF 354
           + P+ +T+N L+A  +R GL + A  L   ++ +G+  D FTY TL+ A  +  + + A 
Sbjct: 350 ISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKAL 409

Query: 355 EIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL------------------------- 389
           E   EM   N +PN+VTY+ +ID Y +  +LDD +                         
Sbjct: 410 ETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSF 469

Query: 390 ----------NMFSEMKFLGIGLDRVSYNTVLSIY------------------------- 414
                     N+F EMK  G      ++N ++  Y                         
Sbjct: 470 GNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTV 529

Query: 415 ----------AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
                     A+ GR+++   V +EM  +G++     +  L+  Y   G++ ++R+  ++
Sbjct: 530 PTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDE 589

Query: 465 MKADCVSP-NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           ++     P + +   T +  Y K G+  EA     +    G   D+ +++A+I    K G
Sbjct: 590 LEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRG 649

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
            +E AV LL+E+ K  ++P+ VTYN ++  +GR           E    K +E  +    
Sbjct: 650 WIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGR-----------EGMYYKAEEVMS---- 694

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
                 +++ AG+  N I   +  L+      G+ ++  R        VF  M   +++P
Sbjct: 695 ------EMRRAGKAPNLI--TYNTLLYSYTKHGRMDDAAR--------VFGDMVAARVRP 738

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA-HGLLMGYRDN 692
           +  TF+ ++ + S    +++A  ++E +     Q   +    LL GY  N
Sbjct: 739 DNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNRN 788



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 212/414 (51%), Gaps = 15/414 (3%)

Query: 153 LCGADDYTFL-LRELGNRGE-WSKAIQCFAFAVKREERKNDQGK---LASAMISILGRLG 207
           LC  D++T+  L    NR E + KA++ F      E RK +        + +I I GR+ 
Sbjct: 385 LC-PDEFTYCTLISAFNRAERYEKALETFT-----EMRKTNCTPNIVTYNILIDIYGRME 438

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K+D    +F+    +     +  +++L+ ++G  G   E  +VF  MKR    P + T+N
Sbjct: 439 KLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFN 498

Query: 268 AVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
            +I+  G+ G VD+   V+I+  +LR G+QP   TF +L+A  +R G W+    +  EM 
Sbjct: 499 ILIECYGRCGYVDYS--VDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMA 556

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP-NVVTYSTMIDGYAKAGRL 385
             G+      +  L+ +     Q     + + E+      P + +   T +  Y K G  
Sbjct: 557 EAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMD 616

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           ++A    +++   G   D   +N ++S+ AK G  E A+ + +E+  + ++ D VTYN L
Sbjct: 617 NEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCL 676

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +  YG++G Y +   +  +M+    +PNL+TY+TL+  Y+K G   +A ++F +   A +
Sbjct: 677 MSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARV 736

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
           + D   ++ L+ +    GL + A+S+++ MT+ G +P  +T+ +++D + R+A+
Sbjct: 737 RPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNRNAS 790


>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
 gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
          Length = 784

 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 153/517 (29%), Positives = 264/517 (51%), Gaps = 44/517 (8%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           LA+A I ++ R G++  A  + + A     G    A++AL+SA+ R+G  ++A++VF  M
Sbjct: 144 LATA-IRVMARAGRLAEASALLDAAPGPDAG----AYTALVSAFSRAGRFRDAVAVFRRM 198

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               ++P +VTYN V+    K  V +K VVE+   M  +GV PDR T+N+L++ C R  L
Sbjct: 199 VDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRAL 258

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           ++ A  +F+EM   G + D  T+N+LLD   K  + D A E++ EM      P+VVTY++
Sbjct: 259 YKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNS 318

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I  Y K G L+ A+ +  EM+  G+  D V+Y T++S   + G+ + A++   EM  +G
Sbjct: 319 LISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 378

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
            + +  TYNAL+  +G +GK+ E+  +F++ ++    P+++T++TL+ V+ + GL  E  
Sbjct: 379 CKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVS 438

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +F+E K+AG   +   Y +LI +  + GL + A+ +   M + GI P+V TYN+++ A 
Sbjct: 439 GVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSAL 498

Query: 555 GRSATTE-------------CTVDDVERD--LGKQKESANLDAMCSQDDKDVQEAGRTDN 599
            R    E             C  D+      L     +  LD M +  D    E     N
Sbjct: 499 ARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHN 558

Query: 600 QII--------KVFGQLVAEKAGQGKKENRCRQEI------LCILG----------VFQK 635
            ++        KV     AEKA    ++ RC  +I      + I G          +   
Sbjct: 559 WLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSL 618

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           M +  I  +  T++++++  SR    E    +L E++
Sbjct: 619 MKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIK 655



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 221/440 (50%), Gaps = 9/440 (2%)

Query: 122 SVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGAD----DYTFLLRELGNRGEWSKAIQ 177
           SVV   +L  ++++ +D +    +  K E ++ G       YT L+  L   G+   AI 
Sbjct: 312 SVVTYNSL--ISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIV 369

Query: 178 CFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISA 237
            +   V+   + N      +A+I + G  GK      +F+   + G+   +  ++ L++ 
Sbjct: 370 EYDEMVRNGCKPNLC--TYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAV 427

Query: 238 YGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP 297
           +G++G   E   VF  MK+    P   TY ++I +  + G+ F   ++I+  M+  G+ P
Sbjct: 428 FGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL-FDLAMQIYKRMMEAGIYP 486

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
           D  T+N++L+  +RGG WE A  LF EM  R    D ++Y++LL A     ++D    + 
Sbjct: 487 DVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALS 546

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
            ++ ++ I P+     T++   +K   L +A   F E++     LD    N ++SIY K 
Sbjct: 547 DDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKN 606

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
               +   +   M+ S I   A TYN+L+  Y + G  ++   +  ++K+  V P+  +Y
Sbjct: 607 RMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSY 666

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           +T+I  Y + G  KEA ++F E K +GLK DVV Y+  + +   N + E A+ L+  M  
Sbjct: 667 NTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVT 726

Query: 538 EGIRPNVVTYNSIIDAFGRS 557
           +G +PN  TYNSI++ + R+
Sbjct: 727 QGCKPNERTYNSIVEGYCRN 746



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 194/371 (52%), Gaps = 1/371 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS L R GK+D A   ++  +  G    +  ++ALI  +G  G   E ++VF+  + 
Sbjct: 352 TTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRS 411

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++VT+N ++   G+ G+D   V  +F +M + G  P+R T+ SL++  SR GL++
Sbjct: 412 AGFVPDIVTWNTLLAVFGQNGLD-SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 470

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  ++  M+  GI  D+ TYN +L A+ +G + + A ++ AEM  ++  P+  +YS+++
Sbjct: 471 LAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 530

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             YA A RLD    +  ++    I        T++ + +K+    EA     E+      
Sbjct: 531 HAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCS 590

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D    NA++  YGK     +V ++   MK   ++ +  TY++L+ +YS+ G  ++   I
Sbjct: 591 LDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENI 650

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             E K +G++ D   Y+ +I A  + G ++ A  L  EM   G++P+VVTYN  + ++  
Sbjct: 651 LTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVS 710

Query: 557 SATTECTVDDV 567
           ++  E  ++ V
Sbjct: 711 NSMFEEAIELV 721



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 136/297 (45%), Gaps = 36/297 (12%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++IS   R G  DLA  I++  +  G    V  ++A++SA  R G  ++A  +F  M+  
Sbjct: 458 SLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEER 517

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR-GGLWE 316
           + KP+  +Y++++ A          +  + DD+    ++P      +L+ V S+   L E
Sbjct: 518 DCKPDEYSYSSLLHAYANAK-RLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAE 576

Query: 317 AAR--------------NLFNEMV--------------------HRGIDQDIFTYNTLLD 342
           A +              N+ N MV                       I+    TYN+L+ 
Sbjct: 577 AEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMH 636

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
              +    +    I+ E+ +  + P+  +Y+T+I  Y + G++ +A  +FSEMK  G+  
Sbjct: 637 MYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKP 696

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           D V+YN  +  Y     FEEA+ + + M + G + +  TYN+++ GY + GK  + +
Sbjct: 697 DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 753



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 129/276 (46%), Gaps = 9/276 (3%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGN--RGEWSKAIQCFAFAVKREERKNDQGKLASAMI 200
           +  + E + C  D+Y++  LL    N  R +  KA+    ++    ER      L   ++
Sbjct: 510 LFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYS----ERIEPHNWLVKTLV 565

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
            +  ++  +  A+  F     +     +   +A++S YG++   ++   + + MK   + 
Sbjct: 566 LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAIN 625

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
            +  TYN+++    + G D +    I  ++  +GV+PDR ++N+++    R G  + A  
Sbjct: 626 LSAATYNSLMHMYSRLG-DCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASR 684

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           LF+EM   G+  D+ TYN  + +    +  + A E++  M  +   PN  TY+++++GY 
Sbjct: 685 LFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYC 744

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           + G+L DA    S +  L  G  +     +  + AK
Sbjct: 745 RNGKLTDAKIFVSNLPQLHPGYSKQEQQNLFEVIAK 780



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 40/207 (19%)

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV-ESAVS 530
           P+   Y+ L+  +S+ G +++A+ +FR    +G++  +V Y+ ++    K  +  +  V 
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCS---Q 586
           L+  M + G+ P+  TYN++I    R A                KE+A + D M +   +
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRAL--------------YKEAAQVFDEMKASGFE 275

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
            DK       T N ++ V+G           K  R  + I     V Q+M ++   P+VV
Sbjct: 276 PDK------VTFNSLLDVYG-----------KARRHDEAI----EVIQEMERVGCPPSVV 314

Query: 647 TFSAILNACSRCNSFEDASMLLEELRL 673
           T+++++++  +    E A  L +E+ +
Sbjct: 315 TYNSLISSYVKDGLLEQAVALKQEMEV 341


>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
          Length = 821

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 144/513 (28%), Positives = 263/513 (51%), Gaps = 14/513 (2%)

Query: 170 GEWSKAIQCFAFAV----KREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYG 225
           G W +A+  F +A+     R E+ ++Q  L   M+ ILGR  +  +A  + +    E Y 
Sbjct: 149 GNWKRAVLLFKWAILNLYSRNEKIDNQ--LVELMVRILGRESQHSVALRLLDEISVEEYS 206

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
             V A++ ++ AY R G  + AI++F  M++  L P LVTYN ++D  GK G  +  ++ 
Sbjct: 207 LDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILG 266

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           + D+M  NG++ D  T +++++ C R GL + AR  F  +   G     FTYN+LL    
Sbjct: 267 LLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFG 326

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K      A  I+ EM   N  P++VTY+ ++  Y +AG  ++  +    M   GI  + +
Sbjct: 327 KAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAI 386

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y TV++ Y K G+ ++AL   ++M+ SG   +  TYNA+LG  GK+ + +E+  M   M
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM 446

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           +++  +PN +T++T++ +    G++K   ++FRE K  G + +   ++ALI A  + G  
Sbjct: 447 RSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQ 506

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR----SATTECTVDDVERDLGKQKESANLD 581
              V + +EM K G  P V TYN++++A  R     A     +D   +     + S +L 
Sbjct: 507 IDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLM 566

Query: 582 AMCSQDDKDVQEAGRTDNQIIK--VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
             C     + +   + + +I    +F   +  +       N  R+ ++ +   FQ+  K 
Sbjct: 567 LNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLV--LANFKRRALMGMERAFQEFCKH 624

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             KP++V F+++L+  ++   ++ A  +L  +R
Sbjct: 625 GYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIR 657



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/492 (23%), Positives = 223/492 (45%), Gaps = 77/492 (15%)

Query: 148 KFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGR 205
           K E  + G   Y  LL+  G  G +S+A+      +K  E+ N    L +   +++   R
Sbjct: 307 KSEGYVAGTFTYNSLLQVFGKAGIYSEALSI----LKEMEKNNCPPDLVTYNELVAAYVR 362

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
            G  +   +  +T + +G       ++ +I+AYG++G   +A+S F  MK     PN+ T
Sbjct: 363 AGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCT 422

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL----------- 314
           YNA++   GK     + ++++  DM  NG  P+ +T+N++LA+C   G+           
Sbjct: 423 YNAILGMLGKKS-RLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREM 481

Query: 315 ----WEAARNLFN--------------------EMVHRGIDQDIFTYNTLLDAICKGAQM 350
               +E  R+ FN                    EM+  G    + TYN LL+A+ +    
Sbjct: 482 KSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDW 541

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG------RLDDAL--------------- 389
           + A  ++ +M +K   PN  +YS M++ YAK G      ++++ +               
Sbjct: 542 EAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTL 601

Query: 390 --------------NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
                           F E    G   D V +N++LSI+AK   ++ A  + + +  SG+
Sbjct: 602 VLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGL 661

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D VTYN+L+  Y + G+  +   + + ++     P+L++Y+T+I  + + GL +EA++
Sbjct: 662 QPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIR 721

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
              E   +G++  +V Y+  +      G+      ++  M +   RPN +TY  ++D + 
Sbjct: 722 TLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYC 781

Query: 556 RSATTECTVDDV 567
           +    +  +D V
Sbjct: 782 KGKKYKEAMDFV 793



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 205/466 (43%), Gaps = 73/466 (15%)

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
           +Q  +A  ++ E+  +  S +V  ++T++  Y++ G+ + A+ MF +M+  G+    V+Y
Sbjct: 188 SQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTY 247

Query: 408 NTVLSIYAKLGR-FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           N +L +Y K+GR + + L +  EM S+G+  D  T + ++   G++G  DE R+ F ++K
Sbjct: 248 NVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLK 307

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           ++       TY++L+ V+ K G+Y EA+ I +E ++     D+V Y+ L+ A  + G  E
Sbjct: 308 SEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHE 367

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE------------------CTVDDVE 568
                +D M ++GI PN +TY ++I+A+G++   +                  CT + + 
Sbjct: 368 EGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAIL 427

Query: 569 RDLGKQKE-SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
             LGK+      +D +C            T N ++ + G       G  K  NR      
Sbjct: 428 GMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGN-----KGMHKYVNR------ 476

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM 687
               VF++M     +PN  TF+A++ A  RC S  D   + EE+         +  G   
Sbjct: 477 ----VFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEM---------IKAGF-- 521

Query: 688 GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN 747
                                 +     YNAL + L   G    A+ V+L+ K +    N
Sbjct: 522 ----------------------TPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPN 559

Query: 748 VWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILT 793
             S S +       G  R      +  I   ++ GH  P  + + T
Sbjct: 560 ETSYSLMLNCYAKGGNGRG-----IEKIEEEIYNGHIFPSWILLRT 600


>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
           [Vitis vinifera]
 gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  236 bits (601), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 144/513 (28%), Positives = 263/513 (51%), Gaps = 14/513 (2%)

Query: 170 GEWSKAIQCFAFAV----KREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYG 225
           G W +A+  F +A+     R E+ ++Q  L   M+ ILGR  +  +A  + +    E Y 
Sbjct: 149 GNWKRAVLLFKWAILNLYSRNEKIDNQ--LVELMVRILGRESQHSVALRLLDEISVEEYS 206

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
             V A++ ++ AY R G  + AI++F  M++  L P LVTYN ++D  GK G  +  ++ 
Sbjct: 207 LDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILG 266

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           + D+M  NG++ D  T +++++ C R GL + AR  F  +   G     FTYN+LL    
Sbjct: 267 LLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFG 326

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K      A  I+ EM   N  P++VTY+ ++  Y +AG  ++  +    M   GI  + +
Sbjct: 327 KAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAI 386

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y TV++ Y K G+ ++AL   ++M+ SG   +  TYNA+LG  GK+ + +E+  M   M
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM 446

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           +++  +PN +T++T++ +    G++K   ++FRE K  G + +   ++ALI A  + G  
Sbjct: 447 RSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQ 506

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR----SATTECTVDDVERDLGKQKESANLD 581
              V + +EM K G  P V TYN++++A  R     A     +D   +     + S +L 
Sbjct: 507 IDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLM 566

Query: 582 AMCSQDDKDVQEAGRTDNQIIK--VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
             C     + +   + + +I    +F   +  +       N  R+ ++ +   FQ+  K 
Sbjct: 567 LNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLV--LANFKRRALMGMERAFQEFCKH 624

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             KP++V F+++L+  ++   ++ A  +L  +R
Sbjct: 625 GYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIR 657



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/492 (23%), Positives = 223/492 (45%), Gaps = 77/492 (15%)

Query: 148 KFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGR 205
           K E  + G   Y  LL+  G  G +S+A+      +K  E+ N    L +   +++   R
Sbjct: 307 KSEGYVAGTFTYNSLLQVFGKAGIYSEALSI----LKEMEKNNCPPDLVTYNELVAAYVR 362

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
            G  +   +  +T + +G       ++ +I+AYG++G   +A+S F  MK     PN+ T
Sbjct: 363 AGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCT 422

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL----------- 314
           YNA++   GK     + ++++  DM  NG  P+ +T+N++LA+C   G+           
Sbjct: 423 YNAILGMLGKKS-RLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREM 481

Query: 315 ----WEAARNLFN--------------------EMVHRGIDQDIFTYNTLLDAICKGAQM 350
               +E  R+ FN                    EM+  G    + TYN LL+A+ +    
Sbjct: 482 KSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDW 541

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG------RLDDAL--------------- 389
           + A  ++ +M +K   PN  +YS M++ YAK G      ++++ +               
Sbjct: 542 EAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTL 601

Query: 390 --------------NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
                           F E    G   D V +N++LSI+AK   ++ A  + + +  SG+
Sbjct: 602 VLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGL 661

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D VTYN+L+  Y + G+  +   + + ++     P+L++Y+T+I  + + GL +EA++
Sbjct: 662 QPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIR 721

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
              E   +G++  +V Y+  +      G+      ++  M +   RPN +TY  ++D + 
Sbjct: 722 TLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYC 781

Query: 556 RSATTECTVDDV 567
           +    +  +D V
Sbjct: 782 KGKKYKEAMDFV 793



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 205/466 (43%), Gaps = 73/466 (15%)

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
           +Q  +A  ++ E+  +  S +V  ++T++  Y++ G+ + A+ MF +M+  G+    V+Y
Sbjct: 188 SQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTY 247

Query: 408 NTVLSIYAKLGR-FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           N +L +Y K+GR + + L +  EM S+G+  D  T + ++   G++G  DE R+ F ++K
Sbjct: 248 NVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLK 307

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           ++       TY++L+ V+ K G+Y EA+ I +E ++     D+V Y+ L+ A  + G  E
Sbjct: 308 SEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHE 367

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE------------------CTVDDVE 568
                +D M ++GI PN +TY ++I+A+G++   +                  CT + + 
Sbjct: 368 EGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAIL 427

Query: 569 RDLGKQKE-SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
             LGK+      +D +C            T N ++ + G       G  K  NR      
Sbjct: 428 GMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGN-----KGMHKYVNR------ 476

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM 687
               VF++M     +PN  TF+A++ A  RC S  D   + EE+         +  G   
Sbjct: 477 ----VFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEM---------IKAGF-- 521

Query: 688 GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN 747
                                 +     YNAL + L   G    A+ V+L+ K +    N
Sbjct: 522 ----------------------TPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPN 559

Query: 748 VWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILT 793
             S S +       G  R      +  I   ++ GH  P  + + T
Sbjct: 560 ETSYSLMLNCYAKGGNGRG-----IEKIEEEIYNGHIFPSWILLRT 600


>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
          Length = 766

 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 153/517 (29%), Positives = 264/517 (51%), Gaps = 44/517 (8%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           LA+A I ++ R G++  A  + + A     G    A++AL+SA+ R+G  ++A++VF  M
Sbjct: 126 LATA-IRVMARAGRLAEASALLDAAPGPDAG----AYTALVSAFSRAGRFRDAVAVFRRM 180

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               ++P +VTYN V+    K  V +K VVE+   M  +GV PDR T+N+L++ C R  L
Sbjct: 181 VDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRAL 240

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           ++ A  +F+EM   G + D  T+N+LLD   K  + D A E++ EM      P+VVTY++
Sbjct: 241 YKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNS 300

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I  Y K G L+ A+ +  EM+  G+  D V+Y T++S   + G+ + A++   EM  +G
Sbjct: 301 LISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 360

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
            + +  TYNAL+  +G +GK+ E+  +F++ ++    P+++T++TL+ V+ + GL  E  
Sbjct: 361 CKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVS 420

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +F+E K+AG   +   Y +LI +  + GL + A+ +   M + GI P+V TYN+++ A 
Sbjct: 421 GVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSAL 480

Query: 555 GRSATTE-------------CTVDDVERD--LGKQKESANLDAMCSQDDKDVQEAGRTDN 599
            R    E             C  D+      L     +  LD M +  D    E     N
Sbjct: 481 ARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHN 540

Query: 600 QII--------KVFGQLVAEKAGQGKKENRCRQEI------LCILG----------VFQK 635
            ++        KV     AEKA    ++ RC  +I      + I G          +   
Sbjct: 541 WLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSL 600

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           M +  I  +  T++++++  SR    E    +L E++
Sbjct: 601 MKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIK 637



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 221/440 (50%), Gaps = 9/440 (2%)

Query: 122 SVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGAD----DYTFLLRELGNRGEWSKAIQ 177
           SVV   +L  ++++ +D +    +  K E ++ G       YT L+  L   G+   AI 
Sbjct: 294 SVVTYNSL--ISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIV 351

Query: 178 CFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISA 237
            +   V+   + N      +A+I + G  GK      +F+   + G+   +  ++ L++ 
Sbjct: 352 EYDEMVRNGCKPNLCTY--NALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAV 409

Query: 238 YGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP 297
           +G++G   E   VF  MK+    P   TY ++I +  + G+ F   ++I+  M+  G+ P
Sbjct: 410 FGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL-FDLAMQIYKRMMEAGIYP 468

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
           D  T+N++L+  +RGG WE A  LF EM  R    D ++Y++LL A     ++D    + 
Sbjct: 469 DVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALS 528

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
            ++ ++ I P+     T++   +K   L +A   F E++     LD    N ++SIY K 
Sbjct: 529 DDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKN 588

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
               +   +   M+ S I   A TYN+L+  Y + G  ++   +  ++K+  V P+  +Y
Sbjct: 589 RMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSY 648

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           +T+I  Y + G  KEA ++F E K +GLK DVV Y+  + +   N + E A+ L+  M  
Sbjct: 649 NTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVT 708

Query: 538 EGIRPNVVTYNSIIDAFGRS 557
           +G +PN  TYNSI++ + R+
Sbjct: 709 QGCKPNERTYNSIVEGYCRN 728



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 194/371 (52%), Gaps = 1/371 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS L R GK+D A   ++  +  G    +  ++ALI  +G  G   E ++VF+  + 
Sbjct: 334 TTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRS 393

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++VT+N ++   G+ G+D   V  +F +M + G  P+R T+ SL++  SR GL++
Sbjct: 394 AGFVPDIVTWNTLLAVFGQNGLD-SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 452

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  ++  M+  GI  D+ TYN +L A+ +G + + A ++ AEM  ++  P+  +YS+++
Sbjct: 453 LAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 512

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             YA A RLD    +  ++    I        T++ + +K+    EA     E+      
Sbjct: 513 HAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCS 572

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D    NA++  YGK     +V ++   MK   ++ +  TY++L+ +YS+ G  ++   I
Sbjct: 573 LDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENI 632

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             E K +G++ D   Y+ +I A  + G ++ A  L  EM   G++P+VVTYN  + ++  
Sbjct: 633 LTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVS 692

Query: 557 SATTECTVDDV 567
           ++  E  ++ V
Sbjct: 693 NSMFEEAIELV 703



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 136/297 (45%), Gaps = 36/297 (12%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++IS   R G  DLA  I++  +  G    V  ++A++SA  R G  ++A  +F  M+  
Sbjct: 440 SLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEER 499

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR-GGLWE 316
           + KP+  +Y++++ A          +  + DD+    ++P      +L+ V S+   L E
Sbjct: 500 DCKPDEYSYSSLLHAYANAK-RLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAE 558

Query: 317 AAR--------------NLFNEMV--------------------HRGIDQDIFTYNTLLD 342
           A +              N+ N MV                       I+    TYN+L+ 
Sbjct: 559 AEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMH 618

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
              +    +    I+ E+ +  + P+  +Y+T+I  Y + G++ +A  +FSEMK  G+  
Sbjct: 619 MYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKP 678

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           D V+YN  +  Y     FEEA+ + + M + G + +  TYN+++ GY + GK  + +
Sbjct: 679 DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 735



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 129/276 (46%), Gaps = 9/276 (3%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGN--RGEWSKAIQCFAFAVKREERKNDQGKLASAMI 200
           +  + E + C  D+Y++  LL    N  R +  KA+    ++    ER      L   ++
Sbjct: 492 LFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYS----ERIEPHNWLVKTLV 547

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
            +  ++  +  A+  F     +     +   +A++S YG++   ++   + + MK   + 
Sbjct: 548 LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAIN 607

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
            +  TYN+++    + G D +    I  ++  +GV+PDR ++N+++    R G  + A  
Sbjct: 608 LSAATYNSLMHMYSRLG-DCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASR 666

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           LF+EM   G+  D+ TYN  + +    +  + A E++  M  +   PN  TY+++++GY 
Sbjct: 667 LFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYC 726

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           + G+L DA    S +  L  G  +     +  + AK
Sbjct: 727 RNGKLTDAKIFVSNLPQLHPGYSKQEQQNLFEVIAK 762



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 94/204 (46%), Gaps = 34/204 (16%)

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV-ESAVS 530
           P+   Y+ L+  +S+ G +++A+ +FR    +G++  +V Y+ ++    K  +  +  V 
Sbjct: 152 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 211

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCSQDDK 589
           L+  M + G+ P+  TYN++I    R A                KE+A + D M +    
Sbjct: 212 LVASMKEHGVAPDRYTYNTLISCCRRRAL--------------YKEAAQVFDEMKASG-- 255

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
             +    T N ++ V+G           K  R  + I     V Q+M ++   P+VVT++
Sbjct: 256 -FEPDKVTFNSLLDVYG-----------KARRHDEAI----EVIQEMERVGCPPSVVTYN 299

Query: 650 AILNACSRCNSFEDASMLLEELRL 673
           +++++  +    E A  L +E+ +
Sbjct: 300 SLISSYVKDGLLEQAVALKQEMEV 323


>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
          Length = 795

 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 150/512 (29%), Positives = 256/512 (50%), Gaps = 43/512 (8%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I +  R G +  A  I E A          A++AL+SA+ R+G  ++A++VF  M    +
Sbjct: 160 IRVFARAGCLAEASAILEAAP----APDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGV 215

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           +P LVTYN V  A  K  V +K VV + D M  +G++ DR T+N+L++ C R GL   A 
Sbjct: 216 QPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAA 275

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            +F+EM   G + D  T+N+LLD   K  + + A  ++  M     +P+VVTY+++I  Y
Sbjct: 276 QVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAY 335

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K G L++AL +  EM+F G+  D V+Y T++S   ++G+ + AL    EM  +G   + 
Sbjct: 336 VKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNL 395

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
            TYNAL+  +G +GK+ E+  +F+ +++    P+++T++TL+ V+ + GL  E   +F+E
Sbjct: 396 CTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKE 455

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
            K+AG   +   Y +LI +  + GL + A+ +   M + GI P++ TYN+++ A  R   
Sbjct: 456 MKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGR 515

Query: 560 TE-------------CTVDDVERD--LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
            E             C  D++     L     +  LD M +  +    E     N ++K 
Sbjct: 516 WEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKT 575

Query: 605 FGQL--------VAEKAGQGKKENRCRQEI------LCILG----------VFQKMHKLK 640
              +          EKA Q  +  RC  +I      + I G          V   M +  
Sbjct: 576 LVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENS 635

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           I  +  T++++++  SR    E    +L E++
Sbjct: 636 INHSAATYNSLMHMYSRLGDCEKCESILTEIK 667



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 218/441 (49%), Gaps = 13/441 (2%)

Query: 122 SVVAEEALHHVTAFARDDV--SLGDILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQ 177
           SVV   +L  ++A+ +D +     ++ ++ EF+    D   YT L+  L   G+   A+ 
Sbjct: 324 SVVTYNSL--ISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALA 381

Query: 178 CFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALI 235
            ++  V    R      L +  A+I + G  GK      +F+   + GY   V  ++ L+
Sbjct: 382 TYSEMV----RNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLL 437

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV 295
           S +G++G   E   VF  MK+    P   TY ++I +  + G+ F   +EI+  M+  G+
Sbjct: 438 SVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL-FDQAMEIYKRMIEAGI 496

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
            PD  T+N++L+  +RGG WE A  LF EMV R    D  +Y++LL A     ++D    
Sbjct: 497 YPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKT 556

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           +  ++ A+ I  +     T++    K   L +    F E++     LD    N ++SIY 
Sbjct: 557 LSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYG 616

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K    ++   V   M  + I   A TYN+L+  Y + G  ++   +  ++K+  + P+  
Sbjct: 617 KNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRY 676

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           +Y+T+I  Y + G  KEA ++F E K +G+K D+V Y+  I +   N + E A+ L+  +
Sbjct: 677 SYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYL 736

Query: 536 TKEGIRPNVVTYNSIIDAFGR 556
             +G RPN  T+NSI+  + R
Sbjct: 737 VTQGCRPNERTFNSILQGYSR 757



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 193/371 (52%), Gaps = 1/371 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS L R+GK+D A   +   +  G    +  ++ALI  +G  G   E ++VF+ ++ 
Sbjct: 364 TTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRS 423

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++VT+N ++   G+ G+D   V  +F +M + G  P+R T+ SL++  SR GL++
Sbjct: 424 AGYVPDVVTWNTLLSVFGQNGLD-SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 482

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  ++  M+  GI  DI TYN +L A+ +G + + A ++ AEM  ++  P+ ++YS+++
Sbjct: 483 QAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLL 542

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             YA A +LD    +  ++    I        T++ +  K+    E     +E+      
Sbjct: 543 HAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCS 602

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D    NA++  YGK     +V  +   M  + ++ +  TY++L+ +YS+ G  ++   I
Sbjct: 603 LDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESI 662

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             E K +G++ D   Y+ +I A  + G ++ A  L  EM   G++P++VTYN  I ++  
Sbjct: 663 LTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVA 722

Query: 557 SATTECTVDDV 567
           +   E  +D V
Sbjct: 723 NIMFEEAIDLV 733



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 124/532 (23%), Positives = 231/532 (43%), Gaps = 112/532 (21%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           + ++   +G     Y ++ LIS   R G  +EA  VF+ MK    +P+ VT+N+++D  G
Sbjct: 242 LVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYG 301

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K     +  + +   M   G  P  +T+NSL++   + GL E A  L  EM  RG+  D+
Sbjct: 302 KAR-KHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 360

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TY TL+  + +  ++D A    +EM     SPN+ TY+ +I  +   G+  + + +F +
Sbjct: 361 VTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDD 420

Query: 395 MKFLGIGLDRVSYNTVLSI-----------------------------------YAKLGR 419
           ++  G   D V++NT+LS+                                   Y++ G 
Sbjct: 421 LRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 480

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
           F++A+ + K M  +GI  D  TYNA+L    + G++++  ++F +M      P+ L+YS+
Sbjct: 481 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSS 540

Query: 480 LIDVYSKG-----------GLYKEAMQ------------------------IFREFKQAG 504
           L+  Y+              +Y E ++                         F+E ++  
Sbjct: 541 LLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRR 600

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
              D+ + +A++    KN +V+    +L  M +  I  +  TYNS++  + R       +
Sbjct: 601 CSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSR-------L 653

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAG-RTD----NQIIKVFGQLVAEKAGQGKKE 619
            D E+              C     +++ +G R D    N +I  +G     + GQ K+ 
Sbjct: 654 GDCEK--------------CESILTEIKSSGMRPDRYSYNTVIYAYG-----RKGQMKEA 694

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +R          +F +M    +KP++VT++  + +      FE+A  L+  L
Sbjct: 695 SR----------LFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYL 736



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/291 (19%), Positives = 123/291 (42%), Gaps = 34/291 (11%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKRE-------------------------------- 186
           Y  +L  L   G W +A + FA  V R+                                
Sbjct: 503 YNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIY 562

Query: 187 -ERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
            ER      L   ++ +  ++  +   +  F+          +   +A++S YG++   +
Sbjct: 563 AERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVK 622

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +   V + M   ++  +  TYN+++    + G D +    I  ++  +G++PDR ++N++
Sbjct: 623 KVEEVLSLMMENSINHSAATYNSLMHMYSRLG-DCEKCESILTEIKSSGMRPDRYSYNTV 681

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    R G  + A  LF+EM   G+  DI TYN  + +       + A +++  +  +  
Sbjct: 682 IYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGC 741

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
            PN  T+++++ GY++ GR+ +A +  S +  +  G+ +     +  + AK
Sbjct: 742 RPNERTFNSILQGYSRHGRMVEAKSFLSNLPKIYPGISKQEKQRLSELLAK 792


>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 829

 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 263/538 (48%), Gaps = 16/538 (2%)

Query: 142 LGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFA-----FAVKREERKNDQGKLA 196
           L D     +F+L  AD +  LL+ L   G W +A+  F      F   +  R ++Q  + 
Sbjct: 127 LNDFFNSVKFELLEAD-FPSLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQ--VV 183

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
             M+ ILGR  +  +A  +F+    E Y   V A++ ++ +Y R+G  + AI +F  MK 
Sbjct: 184 ELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKE 243

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P LVTYN ++D  GK G  +  ++E+ D+M   G++ D  T +++++ C R G+ +
Sbjct: 244 IGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLD 303

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            AR    E+   G      TYN++L    K      A  I+ EM   N  P+ VTY+ + 
Sbjct: 304 EARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELA 363

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             Y +AG LD+ + +   M   G+  + ++Y TV+  Y K GR ++AL +   M+  G  
Sbjct: 364 ATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCA 423

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +  TYN++L   GK+ + ++V ++  +MK +  +PN  T++T++ V S+ G +    ++
Sbjct: 424 PNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKV 483

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            RE K  G + D   ++ LI A  + G    +  +  EM K G  P V TYN++++A  R
Sbjct: 484 LREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAR 543

Query: 557 SA---TTECTVDDVERDLGKQKE-SANLDAMCSQDDKDVQEAGRTDNQIIK--VFGQLVA 610
                  E  + D+     K  E S +L   C     +V+   + + +I    VF   + 
Sbjct: 544 RGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWIL 603

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
            +       ++CR  +  +   F ++ K   KP++V  +++L+  +R   F  A  +L
Sbjct: 604 LRT-LVLTNHKCRH-LRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREML 659



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 200/389 (51%), Gaps = 28/389 (7%)

Query: 302 FNSLLAVCSRGGLWEAARNLFN-EMVHRGIDQDIFTYNTLLDAICK----GAQMDLAFEI 356
           F SLL      G WE A  LF    +H G DQ++   N +++ + +     +Q  +A ++
Sbjct: 143 FPSLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKL 202

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
              +P +  S +V  Y+T++  YA+ G+   A+++F +MK +G+    V+YN +L +Y K
Sbjct: 203 FDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGK 262

Query: 417 LGR-FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           +GR ++  L +  EM S G+  D  T + ++   G++G  DE R+   ++K +   P  +
Sbjct: 263 MGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTV 322

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY++++ V+ K G+Y EA+ I +E +      D V Y+ L     + G ++  ++++D M
Sbjct: 323 TYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTM 382

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESANLDAMCSQDDKDVQE 593
           T +G+ PN +TY ++IDA+G++   +  +    + +DLG        +++ +     + +
Sbjct: 383 TSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAM----LGK 438

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL-----------GVFQKMHKLKIK 642
             RT++ +IKV    + E    G   NR     +  +            V ++M     +
Sbjct: 439 KSRTED-VIKV----LCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFE 493

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEEL 671
           P+  TF+ +++A +RC S  D++ +  E+
Sbjct: 494 PDKDTFNTLISAYARCGSEVDSAKMYGEM 522



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/434 (22%), Positives = 196/434 (45%), Gaps = 45/434 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I   G+ G+ D A  +F    + G    VY ++++++  G+    ++ I V   MK 
Sbjct: 395 TTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKL 454

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL---AVC---- 309
               PN  T+N ++  C + G    +V ++  +M   G +PD+ TFN+L+   A C    
Sbjct: 455 NGCAPNRATWNTMLAVCSEEG-KHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEV 513

Query: 310 ----------------------------SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
                                       +R G W+AA ++  +M  +G   +  +Y+ LL
Sbjct: 514 DSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLL 573

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
               K   +    ++  E+   ++ P+ +   T++    K   L      F +++  G  
Sbjct: 574 HCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYK 633

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D V  N++LS++A+   F +A  +   +   G++ +  TYN L+  Y ++G+  +   +
Sbjct: 634 PDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEV 693

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            + ++     P++++Y+T+I  + + GL +EA+ +  E    G++  +V Y+  +     
Sbjct: 694 LKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAG 753

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
             L + A  ++  M +   RP+ +TY  ++D + ++   E  +D V     K KE   LD
Sbjct: 754 MELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFV----SKIKE---LD 806

Query: 582 AMCSQDDKDVQEAG 595
              S DD+ V+  G
Sbjct: 807 I--SFDDQSVKRLG 818


>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
 gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
          Length = 646

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/574 (26%), Positives = 289/574 (50%), Gaps = 17/574 (2%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           +  + ++ LG +G+W KA++ F + +++ +    +G   ++++S+LG   ++  A  +FE
Sbjct: 4   ELVYFVKALGRQGKWKKALEVFEW-IRKHDCFKLRGVATASILSVLGNHEQLPAALELFE 62

Query: 218 T-ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           +   +E Y   VYA+++LIS   R+    E I++F +M+R   + N VTYN ++D  GK 
Sbjct: 63  SLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKR 122

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G  +  +  +F +M    + PD  T+N+++  C +    + A  LF EM   G   +  T
Sbjct: 123 GDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVT 182

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN LLD   KG     A E++ EM A  ISPN+VTY+ +I  YA+AG  D+A  +   + 
Sbjct: 183 YNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLL 242

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  D  +Y T++S + +  R+E+AL    EM  +    + VTYN L+  YG+  K D
Sbjct: 243 SKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLD 302

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           ++ ++F+ M+    +P+L+T+++L+  +   G+  E   +FRE K+AG    V  ++ LI
Sbjct: 303 DMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILI 362

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
           +   + G V+ +V +   + + G++P V T+ +++ +  R    +   + V +++ +   
Sbjct: 363 ECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQ-QCEKVSQEMAEA-- 419

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL----CILG- 631
              L   C               Q+ K   +L  + A Q      C+  +L    C +  
Sbjct: 420 GLQLSDACHAGLIHSYANSGQFFQLRKYIDEL-EKSAKQPLSGILCKTFVLAYCKCCMDN 478

Query: 632 ----VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM 687
                  +++     P++  F+A+++ C++    E A  LLEE+R    +  GV +  LM
Sbjct: 479 EAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLM 538

Query: 688 GY--RDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
               R+ ++ +A  +  E++    +     YN L
Sbjct: 539 SMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTL 572



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 151/628 (24%), Positives = 270/628 (42%), Gaps = 145/628 (23%)

Query: 151 FKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVD 210
           FKL G    + +L  LGN  +   A++ F  ++K++E  +      +++ISIL R  + D
Sbjct: 34  FKLRGVATAS-ILSVLGNHEQLPAALELFE-SLKQDESYSLDVYAYTSLISILSRARRFD 91

Query: 211 LAKNIFETALNEGY-GNTV-----------------------------------YAFSAL 234
               +FET   EG  GN V                                   Y ++ +
Sbjct: 92  EGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTM 151

Query: 235 ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG 294
           I+A  ++ +CQEA+ +F  MK     PN VTYNA++D  GKGG+  K   E+  +M   G
Sbjct: 152 ITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMH-KEASELLVEMEAAG 210

Query: 295 VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAF 354
           + P+ +T+N L+A  +R GL + A  L   ++ +G+  D FTY TL+ A  +  + + A 
Sbjct: 211 ISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKAL 270

Query: 355 EIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL------------------------- 389
           E   EM   N +PN+VTY+ +ID Y +  +LDD +                         
Sbjct: 271 ETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSF 330

Query: 390 ----------NMFSEMKFLGI--GLDRVSYNTVLSIY----------------------- 414
                     N+F EMK  G   G+D  ++N ++  Y                       
Sbjct: 331 GNCGMLTEVSNVFREMKRAGYMPGVD--TFNILIECYGRCGYVDYSVDIYKGLLRTGLQP 388

Query: 415 ------------AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
                       A+ GR+++   V +EM  +G++     +  L+  Y   G++ ++R+  
Sbjct: 389 TVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYI 448

Query: 463 EQMKADCVSP-NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           ++++     P + +   T +  Y K  +  EA     +    G   D+ +++A+I    K
Sbjct: 449 DELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAK 508

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
            G +E AV LL+E+ K  ++P+ VTYN ++  +GR                K +E  +  
Sbjct: 509 RGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYH-----------KAEEVMS-- 555

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
                   +++ AG+  N I   +  L+      G+ ++  R        VF  M   ++
Sbjct: 556 --------EMRRAGKAPNLI--TYNTLLYSYTKHGRMDDAAR--------VFGDMVAARV 597

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLE 669
           +P+  TF+ ++ + S    +++A  ++E
Sbjct: 598 RPDNFTFNTLVGSYSSLGLYKEALSVIE 625



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 207/409 (50%), Gaps = 15/409 (3%)

Query: 153 LCGADDYTFL-LRELGNRGE-WSKAIQCFAFAVKREERKNDQGK---LASAMISILGRLG 207
           LC  D++T+  L    NR E + KA++ F      E RK +        + +I I GR+ 
Sbjct: 246 LC-PDEFTYCTLISAFNRAERYEKALETFT-----EMRKTNCTPNIVTYNILIDIYGRME 299

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K+D    +F+    +     +  +++L+ ++G  G   E  +VF  MKR    P + T+N
Sbjct: 300 KLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFN 359

Query: 268 AVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
            +I+  G+ G VD+   V+I+  +LR G+QP   TF +L+A  +R G W+    +  EM 
Sbjct: 360 ILIECYGRCGYVDYS--VDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMA 417

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP-NVVTYSTMIDGYAKAGRL 385
             G+      +  L+ +     Q     + + E+      P + +   T +  Y K    
Sbjct: 418 EAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMD 477

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           ++A    +++   G   D   +N ++S+ AK G  E A+ + +E+  + ++ D VTYN L
Sbjct: 478 NEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCL 537

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +  YG++G Y +   +  +M+    +PNL+TY+TL+  Y+K G   +A ++F +   A +
Sbjct: 538 MSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARV 597

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + D   ++ L+ +    GL + A+S+++ MT+ G +P  +T+ +++D +
Sbjct: 598 RPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 646


>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/568 (27%), Positives = 281/568 (49%), Gaps = 35/568 (6%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G+Q D +T+N+LL+ C+R GL + A  +F  M   GI  DI TY+ L++   K  +
Sbjct: 1   MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 60

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++   E++ EM +    P++ +Y+ +++ +A++G + +A+ +F +M+  G   +  +Y+ 
Sbjct: 61  LEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSI 120

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +L++Y + GR+++   +  EM+ S    +A TYN L+  +G+ G + EV  +F  M  + 
Sbjct: 121 LLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEEN 180

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           V PN+ TY  LI    KGGL+++A +I     + G+      Y+ +I+A  +  L E A+
Sbjct: 181 VEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEAL 240

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
              + M + G +P V TYNS+I  F +    + + + +   +G+   + N D        
Sbjct: 241 VAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKES-EAILLKMGQSGVARNRDTF-----N 294

Query: 590 DVQEAGRTDNQI---IKVFGQLVAEKAGQGKKENRCRQEILCILGV-------FQKMHKL 639
            V EA R   Q    IK + ++   +    ++       + C  G+       F ++  L
Sbjct: 295 GVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKAL 354

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYR-----DNIW 694
            I P+V+ +  +L   ++ + ++DA  LL+E  +F N+V  +   +    R     D+ W
Sbjct: 355 GILPSVMCYCMMLAVYAKADRWDDAHQLLDE--MFTNRVSNIHQVIGQMIRGDYDDDSNW 412

Query: 695 VQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN------- 747
                +F+++K    S    FYN L + LW  GQK  A  V+ E  +R ++         
Sbjct: 413 QMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRGLFPELFRKNKL 472

Query: 748 VWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLS--ILTGWGKHSKVVGDG 805
           VWS   +D+H M  GAA   +  WL N+H +   G +LP+L S  ++ G  + S +  D 
Sbjct: 473 VWS---VDVHRMWEGAACTAISVWLNNMHEMFISGDDLPQLASAVVVRGHMEKSSITRDF 529

Query: 806 ALRRAVEVLLTGMGAPFWVANCNLGRFI 833
            + ++    L  + + F     N GR +
Sbjct: 530 PVAKSAYAFLNEVSSSFCFPGWNKGRIV 557



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 178/384 (46%), Gaps = 43/384 (11%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +  A  +F      G       +S L++ YGR G   +   +F  MK  N +PN  TY
Sbjct: 94  GSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATY 153

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N +I+  G+GG  FK VV +F DM+   V+P+  T+  L+  C +GGL E A+ +   M 
Sbjct: 154 NILINVFGEGGY-FKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMN 212

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMD---LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
            +G+      Y  +++A  + A  +   +AF  M E+ +K   P V TY+++I  +AK G
Sbjct: 213 EKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSK---PTVETYNSLIQMFAKGG 269

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
              ++  +  +M   G+  +R ++N V+  + + G+FEEA+    EME +    D  T  
Sbjct: 270 LYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLE 329

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ-------- 495
           A+L  Y   G  +E    F ++KA  + P+++ Y  ++ VY+K   + +A Q        
Sbjct: 330 AVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTN 389

Query: 496 ----------------------------IFREFKQAGLKADVVLYSALIDALCKNGLVES 527
                                       +F + K  G    V  Y+ L++AL   G  E 
Sbjct: 390 RVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKER 449

Query: 528 AVSLLDEMTKEGIRPNVVTYNSII 551
           A  +L+E TK G+ P +   N ++
Sbjct: 450 ATRVLNEATKRGLFPELFRKNKLV 473



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 179/339 (52%), Gaps = 1/339 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++   G+L +++    + +   + G    + +++ L+ A+ +SG  +EA+ VF  M+ 
Sbjct: 49  SYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQG 108

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               PN  TY+ +++  G+ G  +  V ++F +M  +  +P+  T+N L+ V   GG ++
Sbjct: 109 AGCVPNAATYSILLNLYGRHG-RYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFK 167

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               LF++MV   ++ ++ TY  L+ A  KG   + A +I+  M  K + P+   Y+ +I
Sbjct: 168 EVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVI 227

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           + Y +A   ++AL  F+ M  +G      +YN+++ ++AK G ++E+  +  +M  SG+ 
Sbjct: 228 EAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVA 287

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
           ++  T+N ++  + + G+++E  + + +M+     P+  T   ++ VY   GL +E+ + 
Sbjct: 288 RNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQ 347

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           F E K  G+   V+ Y  ++    K    + A  LLDEM
Sbjct: 348 FGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEM 386



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 171/361 (47%), Gaps = 1/361 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S   R G  D A+ +F T    G    +  +S L+  +G+    ++   +   M+ 
Sbjct: 14  NTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMES 73

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++ +YN +++A  + G   K  + +F  M   G  P+  T++ LL +  R G ++
Sbjct: 74  GGSFPDITSYNVLLEAHAQSG-SIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYD 132

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
             R+LF EM     + +  TYN L++   +G        +  +M  +N+ PN+ TY  +I
Sbjct: 133 DVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLI 192

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
               K G  +DA  +   M   G+     +Y  V+  Y +   +EEAL+    M   G +
Sbjct: 193 FACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSK 252

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
               TYN+L+  + K G Y E   +  +M    V+ N  T++ +I+ + +GG ++EA++ 
Sbjct: 253 PTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKA 312

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           + E ++A    D     A++   C  GLVE +     E+   GI P+V+ Y  ++  + +
Sbjct: 313 YVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAK 372

Query: 557 S 557
           +
Sbjct: 373 A 373



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 37/361 (10%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
           A  Y  L+   G  G + + +  F   V  EE      +    +I   G+ G  + AK I
Sbjct: 150 AATYNILINVFGEGGYFKEVVTLFHDMV--EENVEPNMETYEGLIFACGKGGLHEDAKKI 207

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
                 +G   +  A++ +I AYG++   +EA+  FN+M     KP + TYN++I    K
Sbjct: 208 LLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAK 267

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           GG+ +K    I   M ++GV  +R TFN ++    +GG +E A   + EM     D D  
Sbjct: 268 GGL-YKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQ 326

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           T   +L   C    ++ + E   E+ A  I P+V+ Y  M+  YAKA R DDA  +    
Sbjct: 327 TLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQL---- 382

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
                 LD +  N V +I+  +G+               IR D          Y     +
Sbjct: 383 ------LDEMFTNRVSNIHQVIGQM--------------IRGD----------YDDDSNW 412

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
             V  +FE++K++  S  +  Y+TL++     G  + A ++  E  + GL  ++   + L
Sbjct: 413 QMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRGLFPELFRKNKL 472

Query: 516 I 516
           +
Sbjct: 473 V 473


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/386 (33%), Positives = 204/386 (52%), Gaps = 38/386 (9%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+  F++ L++G    VY ++ L+ A    G+ +EA+SV   M+     PN VTYN ++ 
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVA 200

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           A C  G VD      + D M   G++P+ +TFNS++    + G  E AR +F+EMV  G+
Sbjct: 201 AFCRAGEVDRAE--RLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGL 258

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             D  +YNTL+   CK      A  + AEM  K I P+VVT++++I    KAG L+ A+ 
Sbjct: 259 APDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVG 318

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +  EM+  G+ ++ +++  ++  + K G  ++ALL  +EM    I+   V YNAL+ GY 
Sbjct: 319 LVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYC 378

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI-------------- 496
             G+ DE R +  +M+A  V P+++TYST++  Y K G    A Q+              
Sbjct: 379 MVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAI 438

Query: 497 ---------------------FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
                                F+     GL+ D V Y++LID  CK G VE A+SL DEM
Sbjct: 439 TYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEM 498

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTE 561
            K G+ P+VVTY+ +I+   +SA T+
Sbjct: 499 VKAGVLPDVVTYSVLINGLSKSARTK 524



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 236/450 (52%), Gaps = 35/450 (7%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           GY  +V A++A++ A   +     A   F+SM    + PN+ TYN ++ A CG+G    K
Sbjct: 118 GYAPSVLAYNAVLLALSDASL-PSARRFFDSMLSDGVAPNVYTYNILVRALCGRG--HRK 174

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             + +  DM   G  P+ +T+N+L+A   R G  + A  L + M   G+  ++ T+N+++
Sbjct: 175 EALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVV 234

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           + ICK  +M+ A ++  EM  + ++P+ V+Y+T++ GY K G   +AL++F+EM   GI 
Sbjct: 235 NGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIM 294

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D V++ +++ +  K G  E A+ + +EM   G++ + +T+ AL+ G+ K+G  D+    
Sbjct: 295 PDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLA 354

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
             +M+   + P+++ Y+ LI+ Y   G   EA ++ RE +  G+K DVV YS ++ A CK
Sbjct: 355 VREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCK 414

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
           NG   SA  L  +M + G+ P+ +TY+S+I                 R L ++K   +  
Sbjct: 415 NGDTHSAFQLNQQMLENGVLPDAITYSSLI-----------------RVLCEEKRLGDAH 457

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
            +     K++   G   +++   +  L+     +G  E          L +  +M K  +
Sbjct: 458 VL----FKNMISLGLQPDEV--TYTSLIDGHCKEGNVER--------ALSLHDEMVKAGV 503

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            P+VVT+S ++N  S+    ++A  LL +L
Sbjct: 504 LPDVVTYSVLINGLSKSARTKEAQRLLFKL 533



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 211/396 (53%), Gaps = 9/396 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERK---NDQGKLASAMISILGRLGKVDLAKNI 215
           Y  L+R L  RG   +A+     +V R+ R    +      + +++   R G+VD A+ +
Sbjct: 160 YNILVRALCGRGHRKEAL-----SVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERL 214

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
            +     G    +  F+++++   ++G  ++A  VF+ M +  L P+ V+YN ++    K
Sbjct: 215 VDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCK 274

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            G   +  + +F +M R G+ PD +TF SL+ V  + G  E A  L  EM  RG+  +  
Sbjct: 275 VGCSHE-ALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEI 333

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           T+  L+D  CK   +D A   + EM    I P+VV Y+ +I+GY   GR+D+A  +  EM
Sbjct: 334 TFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM 393

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           +  G+  D V+Y+T+LS Y K G    A  + ++M  +G+  DA+TY++L+    ++ + 
Sbjct: 394 EAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRL 453

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            +   +F+ M +  + P+ +TY++LID + K G  + A+ +  E  +AG+  DVV YS L
Sbjct: 454 GDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVL 513

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           I+ L K+   + A  LL ++  E   P  + Y++++
Sbjct: 514 INGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALM 549



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/398 (22%), Positives = 182/398 (45%), Gaps = 53/398 (13%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I ++ + G ++ A  +       G       F+ALI  + + G+  +A+     M++
Sbjct: 301 TSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQ 360

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             ++P++V YNA+I+  C  G +D     E+  +M   GV+PD +T++++L+   + G  
Sbjct: 361 CRIQPSVVCYNALINGYCMVGRMD--EARELVREMEAKGVKPDVVTYSTILSAYCKNGDT 418

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            +A  L  +M+  G+  D  TY++L+  +C+  ++  A  +   M +  + P+ VTY+++
Sbjct: 419 HSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSL 478

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA------------ 423
           IDG+ K G ++ AL++  EM   G+  D V+Y+ +++  +K  R +EA            
Sbjct: 479 IDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEP 538

Query: 424 ----------LLVCKEMESSGIRK----------------------------DAVTYNAL 445
                     +  C+  E   +                              D   Y+ L
Sbjct: 539 VPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVL 598

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G+ ++G   +     +QM     +PN  +  +LI    + G+  EA Q+ ++      
Sbjct: 599 IHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCS 658

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            AD     ALID   K G V++ + +L  M ++G+ P+
Sbjct: 659 LADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 144/321 (44%), Gaps = 34/321 (10%)

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G     + YNA+L            RR F+ M +D V+PN+ TY+ L+      G  KEA
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           + + R+ + AG   + V Y+ L+ A C+ G V+ A  L+D M + G++PN+VT+NS+++ 
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
             ++   E    D  +                  D+ V+E    D      +  LV    
Sbjct: 237 ICKAGRME----DARKVF----------------DEMVKEGLAPDGV---SYNTLVGGYC 273

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
             G     C  E L    VF +M +  I P+VVTF+++++   +  + E A  L+ E+R 
Sbjct: 274 KVG-----CSHEAL---SVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRE 325

Query: 674 FDNQVYGVAH-GLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRG 731
              Q+  +    L+ G+ +      AL    E++      +   YNAL +     G+   
Sbjct: 326 RGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDE 385

Query: 732 AQLVVLEGKRRQVWENVWSES 752
           A+ +V E + + V  +V + S
Sbjct: 386 ARELVREMEAKGVKPDVVTYS 406


>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 830

 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 148/538 (27%), Positives = 267/538 (49%), Gaps = 16/538 (2%)

Query: 142 LGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFA-----FAVKREERKNDQGKLA 196
           L D     +F+L  AD +  LL+ L   G W +A+  F      F   +  R ++Q  + 
Sbjct: 128 LNDFFNSVKFELLEAD-FPSLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQ--VV 184

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
             M+ ILGR  +  +A  +F+    E Y   V A++ ++ AY RSG  + AI +F+ M+ 
Sbjct: 185 ELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEG 244

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P LVTYN ++D  GK G  +  ++E+ D+M   G++ D  T +++++ C R G+ +
Sbjct: 245 IGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLD 304

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            AR    E+   G       YN++L    K      A  I+ EM   N  P+ +TY+ + 
Sbjct: 305 EARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELA 364

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             Y +AG LD+ + +   M   G+  + ++Y TV+  Y K GR ++AL +  +M+  G  
Sbjct: 365 ATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCA 424

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +  TYN++L   GK+ + ++V ++  +MK +  +PN  T++T++ V S+ G +    ++
Sbjct: 425 PNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKV 484

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF-- 554
            RE K  G + D   ++ LI +  + G    +  +  EM K G  P V TYN++++A   
Sbjct: 485 LREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAH 544

Query: 555 -GRSATTECTVDDVERDLGKQKESA-NLDAMCSQDDKDVQEAGRTDNQII--KVFGQLVA 610
            G     E  + D++    K  E++ +L   C     +V+   + + +I   +VF   + 
Sbjct: 545 RGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWIL 604

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
            +       ++CR  +  +   F ++ K   KP++V  +++L+  SR   F  A  +L
Sbjct: 605 LRT-LVLSNHKCRH-LRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREML 660



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 236/507 (46%), Gaps = 58/507 (11%)

Query: 302 FNSLLAVCSRGGLWEAARNLFN-EMVHRGIDQDIFTYNTLLDAICK----GAQMDLAFEI 356
           F SLL      G WE A  LF    +H G DQ++   N +++ + +     +Q  +A ++
Sbjct: 144 FPSLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKL 203

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR--VSYNTVLSIY 414
              +P +  S +V  Y+T++  YA++G+   A+++F +M+  GIGLD   V+YN +L +Y
Sbjct: 204 FDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKME--GIGLDPTLVTYNVMLDVY 261

Query: 415 AKLGR-FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
            K+GR +   L +  EM S G+  D  T + ++   G++G  DE R+   ++K +   P 
Sbjct: 262 GKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPG 321

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            + Y++++ V+ K G+Y EA+ I +E +      D + Y+ L     + G ++  ++++D
Sbjct: 322 TVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVID 381

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
            MT +G+ PN +TY ++IDA+G++       DD  R   K K     D  C+ +      
Sbjct: 382 TMTSKGVMPNAITYTTVIDAYGKAGRE----DDALRLFSKMK-----DLGCAPN------ 426

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
              T N ++ + G           K++R       ++ V  +M      PN  T++ +L 
Sbjct: 427 -VYTYNSVLAMLG-----------KKSRTED----VIKVLCEMKLNGCAPNRATWNTMLA 470

Query: 654 ACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTAS 713
            CS        + +L E++    +        L+    + + +  S  D  K+      S
Sbjct: 471 VCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLI----SSYARCGSEVDSAKMYGEMVKS 526

Query: 714 AF------YNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMS-SGAARA 766
            F      YNAL + L H G  + A+ V+ + + +    N  S S L LH  S +G  R 
Sbjct: 527 GFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLL-LHCYSKAGNVRG 585

Query: 767 MVHAWLLNIHSIVFEGHELPKLLSILT 793
           +       +   +++G   P  + + T
Sbjct: 586 IE-----KVEKEIYDGQVFPSWILLRT 607



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/434 (21%), Positives = 194/434 (44%), Gaps = 45/434 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I   G+ G+ D A  +F    + G    VY ++++++  G+    ++ I V   MK 
Sbjct: 396 TTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKL 455

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL-- 314
               PN  T+N ++  C + G    +V ++  +M   G +PD+ TFN+L++  +R G   
Sbjct: 456 NGCAPNRATWNTMLAVCSEEG-KHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEV 514

Query: 315 ---------------------------------WEAARNLFNEMVHRGIDQDIFTYNTLL 341
                                            W+AA ++  +M  +G   +  +Y+ LL
Sbjct: 515 DSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLL 574

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
               K   +    ++  E+    + P+ +   T++    K   L      F +++  G  
Sbjct: 575 HCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYK 634

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D V  N++LS++++   F +A  +   +   G++ +  TYN L+  Y ++ +  +   +
Sbjct: 635 PDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEV 694

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            + ++     P++++Y+T+I  + + GL +EA+++  E    G++  +V Y+  +     
Sbjct: 695 LKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAG 754

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
             L + A  ++  M +   RP+ +TY  ++D + ++   E  +D V     K KE   +D
Sbjct: 755 MELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKHEEAMDFVT----KIKE---ID 807

Query: 582 AMCSQDDKDVQEAG 595
              S DDK V+  G
Sbjct: 808 I--SFDDKSVKRLG 819


>gi|357123530|ref|XP_003563463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 862

 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 164/669 (24%), Positives = 306/669 (45%), Gaps = 36/669 (5%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           D+  + RE   RG+W ++++ F +  ++   + D+  + + +I +LGR G   L K +  
Sbjct: 99  DFAAVYREFSRRGDWQRSVRLFKYMQRQSWCRPDE-HIHAIVIGVLGRQGPALLDKCLEV 157

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                    T  ++++LI+AY R+   +EA ++ + MK   + P   TYN V+ AC +  
Sbjct: 158 FHDLPADSRTALSYTSLIAAYARNALHEEARALLDQMKAAGVAPTAATYNTVLAACARAT 217

Query: 278 ---VDFKHVVEIFDDMLRN---GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              V F  ++ +F +M  +    V+PD  T+N+LLA  +   L + A  L   M+  G+ 
Sbjct: 218 DPPVPFDMLLGLFAEMRHDVSPAVRPDLTTYNTLLAAAAVRSLNDQAEMLLRAMLEAGVL 277

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  +Y  ++DA  +   +    E+  EM     +P+   Y  +++ + + G   +A+ +
Sbjct: 278 PDTASYRHIVDAFARAGDLSRVAELFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVAV 337

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
             +M+  G      +Y  +L +Y + GRF+    + +EM ++ +  D  TYN L   +G 
Sbjct: 338 LRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRELFREMRTA-VPPDTATYNVLFSVFGD 396

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G + EV  +F  M    + P++ T   ++    +GGL+++A ++     + G+      
Sbjct: 397 GGFFKEVVELFHDMLRTGIEPDMETCEGVLVACGQGGLHEDAREVLDYITKEGMVPTAKA 456

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA---TTECTVDDVE 568
           Y+ L++AL    + E A    + MT+ G  P + TYNS+ + F +       E     + 
Sbjct: 457 YTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNSLANVFAKGGLFQEAESIFSRMT 516

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
              G QK   + DA+      +    G   +  +K + ++   +    ++         C
Sbjct: 517 NSAGIQKNKDSFDALI-----EAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 571

Query: 629 ILGV-------FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL-FDNQVYG 680
           I GV       F+++      P+++ +  +L+  +R + + DA  LLEE++    +  + 
Sbjct: 572 IAGVIDESKEQFEEIQSNMAVPSIIAYCMMLSLYARNDRWADAYDLLEEMKTNRASSTHQ 631

Query: 681 VAHGLLMGYRDNI--WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           V   ++ G  D+   W       D   L     +  F+NAL D+LW FGQK  A  V+  
Sbjct: 632 VIASMIQGEYDDSSNWQMVEYALDSSNLEGCDYSLRFFNALLDVLWWFGQKARAARVLDH 691

Query: 739 GKRRQVWEN-------VWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSI 791
                ++         VWS   LD+H MS G A   V  WL  +++ +    +LP+L S+
Sbjct: 692 AVNSGLFPELSRDTKLVWS---LDVHRMSVGGALVAVSVWLNKLYARLKGEKDLPQLASV 748

Query: 792 LTGWGKHSK 800
           +   GK  K
Sbjct: 749 VVLRGKMEK 757


>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 687

 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 157/624 (25%), Positives = 300/624 (48%), Gaps = 59/624 (9%)

Query: 111 GRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGAD----DYTFLLREL 166
           G+PK  +  +  ++  +     TA A  D          EFK+ G       Y   +   
Sbjct: 71  GKPKSLVKLKSILLEAKGRDWRTALAALD----------EFKISGGSLDTTSYNIAIAAC 120

Query: 167 GNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE--TALNEGY 224
            N  +W+ A++     +  E    D     SA I+   + G+   A ++     A  EG 
Sbjct: 121 SNGRQWATAVRLL-REMPTEGVTPDVVTYNSA-IAACSKGGRWKEAMDLLTQMVAPTEGI 178

Query: 225 GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVV 284
              V  +++ I+A    G  +EA+ +   M    + PNL+TYN+ I AC KG   ++  +
Sbjct: 179 TPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKG-RRWEEAM 237

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           ++ ++++  G  P   T+N ++  C++GG W  A +L  +M+   I  D+ +Y++++ A 
Sbjct: 238 DLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAAC 297

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
            +G +   A +++ +M  + +SPNV++Y++ ID  AK  R  +AL++  EM  +G+    
Sbjct: 298 GRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTV 357

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           +SYN+  +  A  GR+ EAL + KEM + GI  + ++YN+ L    K G++++  ++   
Sbjct: 358 ISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRG 417

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M      P+++++++ ID   +G  ++ A+++ RE   AGL  +V+ Y++ I+A  ++  
Sbjct: 418 MSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSAR 477

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
            + A+ L  EM   G+ PNVVTYNS+IDA  +    E  V  +    G        D + 
Sbjct: 478 WQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLL---TGMPARGVAPDVI- 533

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN---------------RCRQEILCI 629
              +  ++  G+ +   + +  QL+     +G K +               R R+     
Sbjct: 534 -SYNSAIEACGKGEQWELAL--QLLKGMPTRGPKPDIISYNSAVTACAKSGRWREA---- 586

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY 689
           LG+ + M  + + PN V++ A ++AC +   ++ A  +L+E+     Q +G    L+  Y
Sbjct: 587 LGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEM-----QTHGATPNLIT-Y 640

Query: 690 RDNI--------WVQALSLFDEVK 705
              I        W +A+ L  +++
Sbjct: 641 SAAIDACAKQGRWKEAVDLLTDLR 664



 Score =  228 bits (582), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 146/542 (26%), Positives = 281/542 (51%), Gaps = 32/542 (5%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM--KRYNLKPNLVTYNAVIDACGKGGV 278
            EG    V  +++ I+A  + G  +EA+ +   M      + P++VTYN+ I AC  GG 
Sbjct: 138 TEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGG- 196

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            +K  +++ + M+  GV P+ IT+NS +  C++G  WE A +L  E++ +G      TYN
Sbjct: 197 RWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYN 256

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            ++DA  KG +   A +++ +M   +I  +V++YS++I    +  R  +A+++  +M+  
Sbjct: 257 PVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQ 316

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  + +SYN+ +   AK  R++EAL + +EM + G+    ++YN+        G++ E 
Sbjct: 317 GVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEA 376

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + ++M A  ++PN ++Y++ +D  +KGG +++A+++ R     G   D++ +++ IDA
Sbjct: 377 LELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDA 436

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
             +    E+AV LL EM   G+ PNV+TYNS I+A GRSA  +  +  + R++  +  S 
Sbjct: 437 CGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAM-GLFREMPTRGLSP 495

Query: 579 N-------LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA-----EKAGQGKKENRCRQEI 626
           N       +DA    +  ++     T      V   +++     E  G+G++     Q  
Sbjct: 496 NVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQ-- 553

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQV-YGVA 682
                + + M     KP+++++++ + AC++   + +A  LL+++    L  N V YG A
Sbjct: 554 -----LLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAA 608

Query: 683 -HGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKR 741
            H    G +   W  A+ +  E++   ++     Y+A  D     G+ + A + +L   R
Sbjct: 609 IHACGKGEQ---WDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEA-VDLLTDLR 664

Query: 742 RQ 743
           RQ
Sbjct: 665 RQ 666



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/541 (26%), Positives = 262/541 (48%), Gaps = 55/541 (10%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
           G W +A+      V   E         ++ I+     G+   A ++ E  + +G    + 
Sbjct: 159 GRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLI 218

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            +++ I A  +    +EA+ +   +      P+  TYN VIDAC KGG  +   +++   
Sbjct: 219 TYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGG-RWLEAMDLLGQ 277

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           ML N +  D I+++S++A C RG  W+ A +L  +M  +G+  ++ +YN+ +DA  KG +
Sbjct: 278 MLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDR 337

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              A +++ EM    + P V++Y++     A  GR  +AL +  EM   GI  + +SYN+
Sbjct: 338 WKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNS 397

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
            L   AK G++E+A+ + + M + G   D +++N+ +   G+  +++    +  +M    
Sbjct: 398 ALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAG 457

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           ++PN++TY++ I+   +   ++EAM +FRE    GL  +VV Y+++IDA  K    E AV
Sbjct: 458 LTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAV 517

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGR---------------------------SATTEC 562
            LL  M   G+ P+V++YNS I+A G+                           SA T C
Sbjct: 518 QLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTAC 577

Query: 563 TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
                    G+ +E+  L        KD+   G T N +   +G  +    G+G++ +  
Sbjct: 578 AKS------GRWREALGLL-------KDMATVGLTPNTV--SYGAAI-HACGKGEQWD-- 619

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQV 678
                  + + ++M      PN++T+SA ++AC++   +++A  LL +LR      D Q 
Sbjct: 620 -----VAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQT 674

Query: 679 Y 679
           Y
Sbjct: 675 Y 675



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 183/330 (55%), Gaps = 1/330 (0%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           TV ++++  +A   +G   EA+ +   M    + PN ++YN+ +DAC KGG  ++  V++
Sbjct: 356 TVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGG-QWEKAVKL 414

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M   G  PD I+FNS +  C RG  WE A  L  EM   G+  ++ TYN+ ++A  +
Sbjct: 415 LRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGR 474

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
            A+   A  +  EMP + +SPNVVTY++MID  AK  + + A+ + + M   G+  D +S
Sbjct: 475 SARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVIS 534

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN+ +    K  ++E AL + K M + G + D ++YN+ +    K G++ E   + + M 
Sbjct: 535 YNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMA 594

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              ++PN ++Y   I    KG  +  A++I +E +  G   +++ YSA IDA  K G  +
Sbjct: 595 TVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWK 654

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            AV LL ++ ++G+ P+  TY ++I AF R
Sbjct: 655 EAVDLLTDLRRQGLTPDAQTYLTVISAFQR 684



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 213/449 (47%), Gaps = 35/449 (7%)

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G D++  +   D+   +G   D  ++N  +A CS G  W  A  L  EM   G+  D+ T
Sbjct: 88  GRDWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVT 147

Query: 337 YNTLLDAICKGAQMDLAFEIMAEM--PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
           YN+ + A  KG +   A +++ +M  P + I+P+VVTY++ I   +  GR  +A+++  +
Sbjct: 148 YNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQ 207

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G+  + ++YN+ +   AK  R+EEA+ + +E+   G      TYN ++    K G+
Sbjct: 208 MVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGR 267

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
           + E   +  QM  + +  ++++YS++I    +G  +KEAM +  + +  G+  +V+ Y++
Sbjct: 268 WLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNS 327

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
            IDA  K    + A+ LL EMT  G+ P V++YNS        AT  C V+      G+ 
Sbjct: 328 AIDACAKGDRWKEALDLLREMTTVGLVPTVISYNS--------ATAACAVN------GRW 373

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
            E+  L        K++   G   N I          K GQ +K  +          + +
Sbjct: 374 VEALELL-------KEMPAQGIAPNTISYNSALDACAKGGQWEKAVK----------LLR 416

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL--FDNQVYGVAHGLLMGYRDN 692
            M  +   P++++F++ ++AC R   +E A  LL E+        V      +    R  
Sbjct: 417 GMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSA 476

Query: 693 IWVQALSLFDEVKLMDSSTASAFYNALTD 721
            W +A+ LF E+     S     YN++ D
Sbjct: 477 RWQEAMGLFREMPTRGLSPNVVTYNSMID 505


>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
 gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
          Length = 796

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 248/482 (51%), Gaps = 39/482 (8%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           A++AL+S + R+G  ++A++VF  M    ++P LVTYN V+    K  V +K VV + D 
Sbjct: 187 AYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVLVDS 246

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M  +G++ DR T+N+L++ C R GL+  A  +F+EM   G + D  T+N+LLD   K  +
Sbjct: 247 MKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARR 306

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            + A  ++ +M     +P+VVTY+++I  Y K G L++AL +  EM+F G+  D V+Y T
Sbjct: 307 HEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTT 366

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++S   ++G+ + AL    EM  +G   +  TYNAL+  +G +GK+ E+  +F+ +++  
Sbjct: 367 LISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAG 426

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P+++T++TL+ V+ + GL  E   +F+E K+AG   +   Y +LI +  + GL + A+
Sbjct: 427 YVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAM 486

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSAT-------------TECTVDDVERD--LGKQ 574
            +   M + GI P++ TYN+++ A  R                 +C  D++     L   
Sbjct: 487 EIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAY 546

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL--------VAEKAGQGKKENRCRQEI 626
             +  LD M +  +    +     N ++K    +          EKA Q  +  RC  +I
Sbjct: 547 ANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDI 606

Query: 627 ------LCILG----------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                 + I G          V   M +  I  +  T++++++  SR    E    +L E
Sbjct: 607 NVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTE 666

Query: 671 LR 672
           ++
Sbjct: 667 IK 668



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 203/398 (51%), Gaps = 42/398 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS L R+GK+D A   +   +  G    +  ++ALI  +G  G   E + VF+ ++ 
Sbjct: 365 TTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRS 424

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++VT+N ++   G+ G+D   V  +F +M + G  P+R T+ SL++  SR GL++
Sbjct: 425 AGYVPDVVTWNTLLAVFGQNGLD-SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 483

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  ++  M+  GI  DI TYN +L A+ +G +   A ++ AEM  ++  P+ ++YS+++
Sbjct: 484 QAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLL 543

Query: 377 DGYAKAGRLD-----------------------------------DALNMFSEMKFLGIG 401
             YA A +LD                                   +    F E++     
Sbjct: 544 HAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCS 603

Query: 402 LDRVSYNTVLSIYAK---LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           LD    N ++SIY K   + + EE L + KE   + I   A TYN+L+  Y + G  ++ 
Sbjct: 604 LDINVLNAMVSIYGKNKMVKKVEEVLTLMKE---NSINHSAATYNSLMHMYSRLGDCEKC 660

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +  ++K+  + P+  +Y+T+I  Y + G  KEA ++F E K +G+K D+V Y+  I +
Sbjct: 661 EAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKS 720

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
              N + E A+ L+  +  +G +PN  TYNSI++ + R
Sbjct: 721 YVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCR 758



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 173/348 (49%), Gaps = 3/348 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++++ G+ G       +F+     GY      + +LIS+Y R G   +A+ ++  M  
Sbjct: 435 NTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIE 494

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P++ TYNAV+ A  +GG  +    ++F +M     +PD ++++SLL   +     +
Sbjct: 495 AGIYPDISTYNAVLSALARGG-RWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLD 553

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
             + L  ++  + I+   +   TL+    K   +    +   E+  +  S ++   + M+
Sbjct: 554 KMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMV 613

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             Y K   +     + + MK   I     +YN+++ +Y++LG  E+   +  E++SSG+R
Sbjct: 614 SIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMR 673

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  +YN ++  YG++G+  E  R+F +MK   V P+++TY+  I  Y    +++EA+ +
Sbjct: 674 PDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDL 733

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            R     G K +   Y+++++  C++G +  A S L  + K  I P +
Sbjct: 734 VRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSNLPK--IYPGI 779



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 100/189 (52%), Gaps = 1/189 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           +   +A++S YG++   ++   V   MK  ++  +  TYN+++    + G D +    I 
Sbjct: 606 INVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLG-DCEKCEAIL 664

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            ++  +G++PDR ++N+++    R G  + A  LF+EM   G+  DI TYN  + +    
Sbjct: 665 TEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVAN 724

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
              + A +++  + A+   PN  TY+++++GY + GR+ +A +  S +  +  G+ +   
Sbjct: 725 LMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSNLPKIYPGISKEEK 784

Query: 408 NTVLSIYAK 416
           + +L + AK
Sbjct: 785 HRLLELLAK 793


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 209/364 (57%), Gaps = 2/364 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY- 257
           ++  L   G+++ A  +       G       ++ L++A+ R+G    A  V + M+   
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 217

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           N KPNLVT+N++++   K G   +   ++FD+M+R G+ PD +++N+LL+   + G    
Sbjct: 218 NAKPNLVTFNSMVNGLCKAG-RMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHE 276

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           +  +F+EM  RG+  D+ T+ +L+ A CK   ++ A  ++A+M  + +  N VT++ +ID
Sbjct: 277 SLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 336

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+ K G LDDAL    EM+  GI    V YN +++ Y KLGR + A  + +EME+  ++ 
Sbjct: 337 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 396

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D VTY+ ++ GY K G  D   ++ ++M    V P+ +TYS+LI    +     +A ++F
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 456

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
               Q G++ D   Y+ LID  CK G VE A+SL DEM ++G+ P+VVTY+ +I+   +S
Sbjct: 457 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 516

Query: 558 ATTE 561
           A T+
Sbjct: 517 ARTK 520



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 205/394 (52%), Gaps = 4/394 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+R L  RG   +A+        R           + +++   R G++D A+ +   
Sbjct: 155 YNILVRALCARGRLEEAVG--VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSL 212

Query: 219 ALNEGYGN-TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
              EG     +  F+++++   ++G  + A  VF+ M R  L P++V+YN ++    K G
Sbjct: 213 MREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVG 272

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
                 + +F +M + G+ PD +TF SL+    + G  E A  L  +M  RG+  +  T+
Sbjct: 273 C-LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTF 331

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             L+D  CK   +D A   + EM    I P+VV Y+ +I+GY K GR+D A  +  EM+ 
Sbjct: 332 TALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEA 391

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             +  D V+Y+T++S Y K+G  + A  + ++M   G+  DA+TY++L+ G  ++ + ++
Sbjct: 392 KRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLND 451

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +FE M    V P+  TY+TLID + K G  ++A+ +  E  + G+  DVV YS LI+
Sbjct: 452 ACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLIN 511

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            L K+   + A  LL ++  E   P+ + Y++++
Sbjct: 512 GLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 230/457 (50%), Gaps = 29/457 (6%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           F ALI +Y        A +           P++  YNAV+ A     +           M
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPSAR--RFLSSM 143

Query: 291 LRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           LR+GV P+  T+N L+ A+C+RG L EA   +  +M   G   +  TYNTL+ A C+  +
Sbjct: 144 LRHGVAPNVYTYNILVRALCARGRLEEAV-GVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202

Query: 350 MDLAFEIMAEMPAK-NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +D A  +++ M  + N  PN+VT+++M++G  KAGR++ A  +F EM   G+  D VSYN
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+LS Y K+G   E+L V  EM   G+  D VT+ +L+    K G  ++   +  QM+  
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            +  N +T++ LID + K G   +A+    E ++ G++  VV Y+ALI+  CK G ++ A
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ------KESANLDA 582
             L+ EM  + ++P+VVTY++II  + +    +      ++ L K         S+ +  
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442

Query: 583 MCSQDDKDVQEAGRTDNQIIKV--------FGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
           +C  ++K + +A      ++++        +  L+     +G  E          L +  
Sbjct: 443 LC--EEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK--------ALSLHD 492

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +M +  + P+VVT+S ++N  S+    ++A  LL +L
Sbjct: 493 EMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 198/404 (49%), Gaps = 49/404 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++M++ L + G+++ A+ +F+  + EG    V +++ L+S Y + G   E+++VF+ M +
Sbjct: 227 NSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 286

Query: 257 YNLKPNLVTYNAVIDACGKGG---------------------VDFKHVVEIF-------- 287
             L P++VT+ ++I A  K G                     V F  +++ F        
Sbjct: 287 RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD 346

Query: 288 -----DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
                ++M + G+QP  + +N+L+    + G  + AR L  EM  + +  D+ TY+T++ 
Sbjct: 347 ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIIS 406

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
             CK   +D AF++  +M  K + P+ +TYS++I G  +  RL+DA  +F  M  LG+  
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D  +Y T++  + K G  E+AL +  EM   G+  D VTY+ L+ G  K  +  E  R+ 
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKG---------------GLYKEAMQIFREFKQAGLKA 507
            ++  +   P+ + Y  L+   SK                GL KEA ++++       K 
Sbjct: 527 FKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKL 586

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           D  +YS LI   C+ G V  A+S   +M + G  PN  +  S++
Sbjct: 587 DGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 630



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 186/402 (46%), Gaps = 22/402 (5%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +T L+      G   +A+   A   +R  R N+     +A+I    + G +D A    E 
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV--TFTALIDGFCKKGFLDDALLAVEE 353

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
               G   +V  ++ALI+ Y + G    A  +   M+   +KP++VTY+ +I   C  G 
Sbjct: 354 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 413

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           +D     ++   ML+ GV PD IT++SL+  +C    L +A   LF  M+  G+  D FT
Sbjct: 414 LD--SAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC-ELFENMLQLGVQPDEFT 470

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y TL+D  CK   ++ A  +  EM  K + P+VVTYS +I+G +K+ R  +A  +  ++ 
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY 530

Query: 397 FLGIGLDRVSYNTVL---------SIYAKL------GRFEEALLVCKEMESSGIRKDAVT 441
                 D + Y+ ++         S+ A L      G  +EA  V + M     + D   
Sbjct: 531 HEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSV 590

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y+ L+ G+ + G   +     +QM     SPN  +  +L+    + G+  EA    ++  
Sbjct: 591 YSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 650

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
                AD     ALID   K G V++ + +L  M ++G+ P+
Sbjct: 651 TCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 692



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 156/351 (44%), Gaps = 39/351 (11%)

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           ++ ++  YA L R   A        S+G       YNA+L            RR    M 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLAL-SDASLPSARRFLSSML 144

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V+PN+ TY+ L+      G  +EA+ +  + + AG   + V Y+ L+ A C+ G ++
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 527 SAVSLLDEMTKEG-IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
            A  ++  M +EG  +PN+VT+NS+++   ++   E          G +K          
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRME----------GARKVF-------- 246

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
             D+ V+E    D   +  +  L++     G     C  E L    VF +M +  + P+V
Sbjct: 247 --DEMVREGLAPD---VVSYNTLLSGYCKVG-----CLHESL---AVFSEMTQRGLVPDV 293

Query: 646 VTFSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGY-RDNIWVQALSLF 701
           VTF+++++A  +  + E A  L+ ++R   L  N+V   A  L+ G+ +      AL   
Sbjct: 294 VTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA--LIDGFCKKGFLDDALLAV 351

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES 752
           +E++      +   YNAL +     G+   A+ ++ E + ++V  +V + S
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS 402


>gi|414888268|tpg|DAA64282.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
          Length = 868

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 184/740 (24%), Positives = 328/740 (44%), Gaps = 109/740 (14%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK--NI 215
           D+  + RE   RG+W ++++ F +  ++   + D+  + + +I +LGR G   L K   +
Sbjct: 105 DFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDE-HIHAIVIGVLGRQGPALLDKCLEV 163

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
           F     E    T  ++++LI+AY R+   +EA ++ + MK                    
Sbjct: 164 FHDLPAES--RTALSYTSLIAAYARNALHEEARALLDQMKA------------------- 202

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG----LWEAARNLFNEMVHRG-- 329
                             GV P   T+N++LA C+R       ++    LF EM H    
Sbjct: 203 -----------------TGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASP 245

Query: 330 -IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            +  D+ TYNTLL A    +  D +  ++  M    +SP+ V+Y  ++D +A AG L  A
Sbjct: 246 SVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAFASAGNLSRA 305

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             +FSEM   G   D  +Y  ++  + ++G   +A+ V ++M++ G    A TY  LL  
Sbjct: 306 AELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDL 365

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           YG+QG++D VR++F +M+   V P+  TY+ L  V+  GG +KE +++F +  + G++ D
Sbjct: 366 YGRQGRFDGVRQLFREMRT-AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPD 424

Query: 509 VVL-----------------------------------YSALIDALCKNGLVESAVSLLD 533
           +V                                    Y+ L++AL    + E A    +
Sbjct: 425 MVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFN 484

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSA---TTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
            MT+ G  P + TYN++  A+ R       E     +  + G QK   + DA+     + 
Sbjct: 485 MMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALI----EA 540

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV-------FQKMHKLKIKP 643
             +  R D+  +K + ++   +    ++         CI GV       F+++      P
Sbjct: 541 YCQGSRLDDA-VKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMP 599

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRL-FDNQVYGVAHGLLMGYRDNI--WVQALSL 700
           +V+ +  +L+  +R + + DA  LLEE++    +  + V   L+ G  D+   W     +
Sbjct: 600 SVIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASLIKGEYDDSSNWQMVEYV 659

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES----CLDL 756
            +   +     +  F+NAL  +LW FGQK  A  V+ +  +  ++  ++ ++     LD+
Sbjct: 660 LENSTMEGCDYSFRFFNALLGVLWWFGQKGRAARVLDQAVKFGLFPELYRDTKLVWSLDV 719

Query: 757 HLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLS--ILTGWGKHSKVVGDGALRRAVEVL 814
           H MS G A   V  WL  ++  + E  +LP+L S  +L G  + S V     + + V   
Sbjct: 720 HRMSMGGALVAVSVWLNKLYDRLVEDEDLPQLASVVVLRGEMEKSTVTRGLPIAKVVYSF 779

Query: 815 LTG-MGAPFWVANCNLGRFI 833
           L   + A F     N GR I
Sbjct: 780 LNDTLSASFHFPKWNKGRII 799


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 209/364 (57%), Gaps = 2/364 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY- 257
           ++  L   G+++ A  +       G       ++ L++A+ R+G    A  V + M+   
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 217

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           N KPNLVT+N++++   K G   +   ++FD+M+R G+ PD +++N+LL+   + G    
Sbjct: 218 NAKPNLVTFNSMVNGLCKAG-RMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHE 276

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           +  +F+EM  RG+  D+ T+ +L+ A CK   ++ A  ++A+M  + +  N VT++ +ID
Sbjct: 277 SLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 336

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+ K G LDDAL    EM+  GI    V YN +++ Y KLGR + A  + +EME+  ++ 
Sbjct: 337 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 396

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D VTY+ ++ GY K G  D   ++ ++M    V P+ +TYS+LI    +     +A ++F
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 456

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
               Q G++ D   Y+ LID  CK G VE A+SL DEM ++G+ P+VVTY+ +I+   +S
Sbjct: 457 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 516

Query: 558 ATTE 561
           A T+
Sbjct: 517 ARTK 520



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 205/394 (52%), Gaps = 4/394 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+R L  RG   +A+        R           + +++   R G++D A+ +   
Sbjct: 155 YNILVRALCARGRLEEAVG--VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSL 212

Query: 219 ALNEGYGN-TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
              EG     +  F+++++   ++G  + A  VF+ M R  L P++V+YN ++    K G
Sbjct: 213 MREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVG 272

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
                 + +F +M + G+ PD +TF SL+    + G  E A  L  +M  RG+  +  T+
Sbjct: 273 C-LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTF 331

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             L+D  CK   +D A   + EM    I P+VV Y+ +I+GY K GR+D A  +  EM+ 
Sbjct: 332 TALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEA 391

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             +  D V+Y+T++S Y K+G  + A  + ++M   G+  DA+TY++L+ G  ++ + ++
Sbjct: 392 KRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLND 451

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +FE M    V P+  TY+TLID + K G  ++A+ +  E  + G+  DVV YS LI+
Sbjct: 452 ACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLIN 511

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            L K+   + A  LL ++  E   P+ + Y++++
Sbjct: 512 GLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 230/457 (50%), Gaps = 29/457 (6%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           F ALI +Y        A +           P++  YNAV+ A     +           M
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPSAR--RFLSSM 143

Query: 291 LRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           LR+GV P+  T+N L+ A+C+RG L EA   +  +M   G   +  TYNTL+ A C+  +
Sbjct: 144 LRHGVAPNVYTYNILVRALCARGRLEEAV-GVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202

Query: 350 MDLAFEIMAEMPAK-NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +D A  +++ M  + N  PN+VT+++M++G  KAGR++ A  +F EM   G+  D VSYN
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+LS Y K+G   E+L V  EM   G+  D VT+ +L+    K G  ++   +  QM+  
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            +  N +T++ LID + K G   +A+    E ++ G++  VV Y+ALI+  CK G ++ A
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ------KESANLDA 582
             L+ EM  + ++P+VVTY++II  + +    +      ++ L K         S+ +  
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442

Query: 583 MCSQDDKDVQEAGRTDNQIIKV--------FGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
           +C  ++K + +A      ++++        +  L+     +G  E          L +  
Sbjct: 443 LC--EEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK--------ALSLHD 492

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +M +  + P+VVT+S ++N  S+    ++A  LL +L
Sbjct: 493 EMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 198/404 (49%), Gaps = 49/404 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++M++ L + G+++ A+ +F+  + EG    V +++ L+S Y + G   E+++VF+ M +
Sbjct: 227 NSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 286

Query: 257 YNLKPNLVTYNAVIDACGKGG---------------------VDFKHVVEIF-------- 287
             L P++VT+ ++I A  K G                     V F  +++ F        
Sbjct: 287 RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD 346

Query: 288 -----DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
                ++M + G+QP  + +N+L+    + G  + AR L  EM  + +  D+ TY+T++ 
Sbjct: 347 ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIIS 406

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
             CK   +D AF++  +M  K + P+ +TYS++I G  +  RL+DA  +F  M  LG+  
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D  +Y T++  + K G  E+AL +  EM   G+  D VTY+ L+ G  K  +  E  R+ 
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKG---------------GLYKEAMQIFREFKQAGLKA 507
            ++  +   P+ + Y  L+   SK                GL KEA ++++       K 
Sbjct: 527 FKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKL 586

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           D  +YS LI   C+ G V  A+S   +M + G  PN  +  S++
Sbjct: 587 DGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 630



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 174/383 (45%), Gaps = 22/383 (5%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +T L+      G   +A+   A   +R  R N+     +A+I    + G +D A    E 
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV--TFTALIDGFCKKGFLDDALLAVEE 353

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
               G   +V  ++ALI+ Y + G    A  +   M+   +KP++VTY+ +I   C  G 
Sbjct: 354 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 413

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           +D     ++   ML+ GV PD IT++SL+  +C    L +A   LF  M+  G+  D FT
Sbjct: 414 LD--SAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC-ELFENMLQLGVQPDEFT 470

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y TL+D  CK   ++ A  +  EM  K + P+VVTYS +I+G +K+ R  +A  +  ++ 
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY 530

Query: 397 FLGIGLDRVSYNTVL---------SIYAKL------GRFEEALLVCKEMESSGIRKDAVT 441
                 D + Y+ ++         S+ A L      G  +EA  V + M     + D   
Sbjct: 531 HEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSV 590

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y+ L+ G+ + G   +     +QM     SPN  +  +L+    + G+  EA    ++  
Sbjct: 591 YSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 650

Query: 502 QAGLKADVVLYSALIDALCKNGL 524
                AD     ALID   K G+
Sbjct: 651 TCCPLADAEASKALIDLNRKEGM 673



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 156/351 (44%), Gaps = 39/351 (11%)

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           ++ ++  YA L R   A        S+G       YNA+L            RR    M 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLAL-SDASLPSARRFLSSML 144

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V+PN+ TY+ L+      G  +EA+ +  + + AG   + V Y+ L+ A C+ G ++
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 527 SAVSLLDEMTKEG-IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
            A  ++  M +EG  +PN+VT+NS+++   ++   E          G +K          
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRME----------GARKVF-------- 246

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
             D+ V+E    D   +  +  L++     G     C  E L    VF +M +  + P+V
Sbjct: 247 --DEMVREGLAPD---VVSYNTLLSGYCKVG-----CLHESL---AVFSEMTQRGLVPDV 293

Query: 646 VTFSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGY-RDNIWVQALSLF 701
           VTF+++++A  +  + E A  L+ ++R   L  N+V   A  L+ G+ +      AL   
Sbjct: 294 VTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA--LIDGFCKKGFLDDALLAV 351

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES 752
           +E++      +   YNAL +     G+   A+ ++ E + ++V  +V + S
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS 402


>gi|414888270|tpg|DAA64284.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
          Length = 890

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 184/740 (24%), Positives = 328/740 (44%), Gaps = 109/740 (14%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK--NI 215
           D+  + RE   RG+W ++++ F +  ++   + D+  + + +I +LGR G   L K   +
Sbjct: 127 DFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDE-HIHAIVIGVLGRQGPALLDKCLEV 185

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
           F     E    T  ++++LI+AY R+   +EA ++ + MK                    
Sbjct: 186 FHDLPAES--RTALSYTSLIAAYARNALHEEARALLDQMKA------------------- 224

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG----LWEAARNLFNEMVHRG-- 329
                             GV P   T+N++LA C+R       ++    LF EM H    
Sbjct: 225 -----------------TGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASP 267

Query: 330 -IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            +  D+ TYNTLL A    +  D +  ++  M    +SP+ V+Y  ++D +A AG L  A
Sbjct: 268 SVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAFASAGNLSRA 327

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             +FSEM   G   D  +Y  ++  + ++G   +A+ V ++M++ G    A TY  LL  
Sbjct: 328 AELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDL 387

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           YG+QG++D VR++F +M+   V P+  TY+ L  V+  GG +KE +++F +  + G++ D
Sbjct: 388 YGRQGRFDGVRQLFREMRT-AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPD 446

Query: 509 VVL-----------------------------------YSALIDALCKNGLVESAVSLLD 533
           +V                                    Y+ L++AL    + E A    +
Sbjct: 447 MVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFN 506

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSA---TTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
            MT+ G  P + TYN++  A+ R       E     +  + G QK   + DA+     + 
Sbjct: 507 MMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALI----EA 562

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV-------FQKMHKLKIKP 643
             +  R D+  +K + ++   +    ++         CI GV       F+++      P
Sbjct: 563 YCQGSRLDDA-VKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMP 621

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRL-FDNQVYGVAHGLLMGYRDNI--WVQALSL 700
           +V+ +  +L+  +R + + DA  LLEE++    +  + V   L+ G  D+   W     +
Sbjct: 622 SVIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASLIKGEYDDSSNWQMVEYV 681

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES----CLDL 756
            +   +     +  F+NAL  +LW FGQK  A  V+ +  +  ++  ++ ++     LD+
Sbjct: 682 LENSTMEGCDYSFRFFNALLGVLWWFGQKGRAARVLDQAVKFGLFPELYRDTKLVWSLDV 741

Query: 757 HLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLS--ILTGWGKHSKVVGDGALRRAVEVL 814
           H MS G A   V  WL  ++  + E  +LP+L S  +L G  + S V     + + V   
Sbjct: 742 HRMSMGGALVAVSVWLNKLYDRLVEDEDLPQLASVVVLRGEMEKSTVTRGLPIAKVVYSF 801

Query: 815 LTG-MGAPFWVANCNLGRFI 833
           L   + A F     N GR I
Sbjct: 802 LNDTLSASFHFPKWNKGRII 821


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 201/365 (55%), Gaps = 1/365 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I IL   G+ + A+ +++  + +G     +A++ LI  +GRSG    A+ +F  MK 
Sbjct: 69  TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI 128

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +P+  TY  +++A GK G   +     FD ML  G+ P+  T+N L+    + G  +
Sbjct: 129 KGSEPDEYTYGFLVNALGKAG-RVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLD 187

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF EM  RG    + TYN LLDA+C   ++  A ++  +M     SP+  TYST++
Sbjct: 188 MALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLV 247

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G  K+GR+++A  +F EM   G+ +D V+YN++L+  AK G  +    + KEM   G  
Sbjct: 248 NGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFH 307

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            DA ++N ++   GK  K D  R +F +M      P+L++Y+ LID Y++ G   +A Q+
Sbjct: 308 PDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQM 367

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             E  +AG   +   Y++LI  L  +G V+ A ++L+EM   G RP+VVTYN ++D  G+
Sbjct: 368 LEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGK 427

Query: 557 SATTE 561
               +
Sbjct: 428 RGENQ 432



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 218/420 (51%), Gaps = 7/420 (1%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           + KK   K C  D + +  L+R  G  G+   A++ F   +K +  + D+      +++ 
Sbjct: 87  VYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFR-EMKIKGSEPDEYTYGF-LVNA 144

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           LG+ G+V  A++ F+  L  G    +  ++ L+ A+ + G    A+ +F  MKR   +P+
Sbjct: 145 LGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPS 204

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +VTYN ++DA C  G V      ++F  M  +G  PD  T+++L+    + G  E A  +
Sbjct: 205 VVTYNILLDALCSAGRVGAAR--KLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKV 262

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F EMV RG+  D+  YN+LL  + K   MD  +++M EM  K   P+  +++T++D   K
Sbjct: 263 FREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGK 322

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           A + D A  +F+ M   G   D +SYN ++  YA+ G   +A  + +EM  +G   +  T
Sbjct: 323 ANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKT 382

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN+L+      G+ DE   + E+M+     P+++TY+ L+D+  K G  + A ++F++ K
Sbjct: 383 YNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMK 442

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G++ D + Y+  ID L  +  ++ A+ L  +M   G   +   Y  +I A  R+  TE
Sbjct: 443 DKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 212/455 (46%), Gaps = 43/455 (9%)

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           +L V +  G+ +    L  EMV  G      T   L+ A  +G +   AF++  +  +  
Sbjct: 1   MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA 60

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
            SP V  ++ +ID    +G  + A  ++ ++   G  LDR +YN ++  + + G+ + A+
Sbjct: 61  CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAM 120

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            + +EM+  G   D  TY  L+   GK G+  E R  F+ M    ++PN+ TY+ L+D +
Sbjct: 121 EMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAF 180

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            K G    A+ +F E K+ G +  VV Y+ L+DALC  G V +A  L  +MT +G  P+ 
Sbjct: 181 RKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDS 240

Query: 545 VTYNSIIDAFGRSATTE-------------CTVDDVERD--LGKQKESANLDAMCSQDDK 589
            TY+++++  G+S   E               VD V  +  L    ++ N+D +     K
Sbjct: 241 YTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVW----K 296

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
            ++E  R            + +  G+  K +  R+       VF +M +   KP++++++
Sbjct: 297 LMKEMSRKGFHPDAFSFNTIMDALGKANKPDAARE-------VFARMVESGCKPDLISYN 349

Query: 650 AILNACSRCNSFEDASMLLEEL---------RLFDNQVYGVAHGLLMGYRDNIWVQALSL 700
            ++++ +R      A  +LEE+         + +++ ++ +A        D    +A ++
Sbjct: 350 ILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLAT-------DGQVDEAFAV 402

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQ-KRGAQL 734
            +E++          YN L DML   G+ +R A+L
Sbjct: 403 LEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARL 437



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 1/204 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++  LG+  K D A+ +F   +  G    + +++ LI +Y R G   +A  +   M  
Sbjct: 314 NTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVE 373

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P   TYN++I      G        + ++M   G +PD +T+N L+ +  + G  +
Sbjct: 374 AGFIPETKTYNSLIHWLATDG-QVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQ 432

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF +M  +G++ D  +Y   +D +    ++D A  +  +M A     +   Y  +I
Sbjct: 433 RAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILI 492

Query: 377 DGYAKAGRLDDALNMFSEMKFLGI 400
               +AG  +    +  E +F+ +
Sbjct: 493 RAAHRAGDTELEAQLKHESQFMPV 516


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 209/364 (57%), Gaps = 2/364 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY- 257
           ++  L   G+++ A  +       G       ++ L++A+ R+G    A  V + M+   
Sbjct: 16  LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 75

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           N KPNLVT+N++++   K G   +   ++FD+M+R G+ PD +++N+LL+   + G    
Sbjct: 76  NAKPNLVTFNSMVNGLCKAG-RMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHE 134

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           +  +F+EM  RG+  D+ T+ +L+ A CK   ++ A  ++A+M  + +  N VT++ +ID
Sbjct: 135 SLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 194

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+ K G LDDAL    EM+  GI    V YN +++ Y KLGR + A  + +EME+  ++ 
Sbjct: 195 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 254

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D VTY+ ++ GY K G  D   ++ ++M    V P+ +TYS+LI    +     +A ++F
Sbjct: 255 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 314

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
               Q G++ D   Y+ LID  CK G VE A+SL DEM ++G+ P+VVTY+ +I+   +S
Sbjct: 315 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 374

Query: 558 ATTE 561
           A T+
Sbjct: 375 ARTK 378



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 205/394 (52%), Gaps = 4/394 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+R L  RG   +A+        R           + +++   R G++D A+ +   
Sbjct: 13  YNILVRALCARGRLEEAVG--VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSL 70

Query: 219 ALNEGYGN-TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
              EG     +  F+++++   ++G  + A  VF+ M R  L P++V+YN ++    K G
Sbjct: 71  MREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVG 130

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
                 + +F +M + G+ PD +TF SL+    + G  E A  L  +M  RG+  +  T+
Sbjct: 131 C-LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTF 189

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             L+D  CK   +D A   + EM    I P+VV Y+ +I+GY K GR+D A  +  EM+ 
Sbjct: 190 TALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEA 249

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             +  D V+Y+T++S Y K+G  + A  + ++M   G+  DA+TY++L+ G  ++ + ++
Sbjct: 250 KRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLND 309

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +FE M    V P+  TY+TLID + K G  ++A+ +  E  + G+  DVV YS LI+
Sbjct: 310 ACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLIN 369

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            L K+   + A  LL ++  E   P+ + Y++++
Sbjct: 370 GLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 403



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 212/398 (53%), Gaps = 27/398 (6%)

Query: 290 MLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           M+R+GV P+  T+N L+ A+C+RG L EA   +  +M   G   +  TYNTL+ A C+  
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAV-GVVGDMRGAGCAPNAVTYNTLVAAFCRAG 59

Query: 349 QMDLAFEIMAEMPAK-NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
           ++D A  +++ M  + N  PN+VT+++M++G  KAGR++ A  +F EM   G+  D VSY
Sbjct: 60  ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 119

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           NT+LS Y K+G   E+L V  EM   G+  D VT+ +L+    K G  ++   +  QM+ 
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             +  N +T++ LID + K G   +A+    E ++ G++  VV Y+ALI+  CK G ++ 
Sbjct: 180 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 239

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ------KESANLD 581
           A  L+ EM  + ++P+VVTY++II  + +    +      ++ L K         S+ + 
Sbjct: 240 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 299

Query: 582 AMCSQDDKDVQEAGRTDNQIIKV--------FGQLVAEKAGQGKKENRCRQEILCILGVF 633
            +C  ++K + +A      ++++        +  L+     +G  E          L + 
Sbjct: 300 GLC--EEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK--------ALSLH 349

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            +M +  + P+VVT+S ++N  S+    ++A  LL +L
Sbjct: 350 DEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 387



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 198/404 (49%), Gaps = 49/404 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++M++ L + G+++ A+ +F+  + EG    V +++ L+S Y + G   E+++VF+ M +
Sbjct: 85  NSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 144

Query: 257 YNLKPNLVTYNAVIDACGKGG---------------------VDFKHVVEIF-------- 287
             L P++VT+ ++I A  K G                     V F  +++ F        
Sbjct: 145 RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD 204

Query: 288 -----DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
                ++M + G+QP  + +N+L+    + G  + AR L  EM  + +  D+ TY+T++ 
Sbjct: 205 ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIIS 264

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
             CK   +D AF++  +M  K + P+ +TYS++I G  +  RL+DA  +F  M  LG+  
Sbjct: 265 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 324

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D  +Y T++  + K G  E+AL +  EM   G+  D VTY+ L+ G  K  +  E  R+ 
Sbjct: 325 DEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 384

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKG---------------GLYKEAMQIFREFKQAGLKA 507
            ++  +   P+ + Y  L+   SK                GL KEA ++++       K 
Sbjct: 385 FKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKL 444

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           D  +YS LI   C+ G V  A+S   +M + G  PN  +  S++
Sbjct: 445 DGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLV 488



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 186/402 (46%), Gaps = 22/402 (5%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +T L+      G   +A+   A   +R  R N+     +A+I    + G +D A    E 
Sbjct: 154 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV--TFTALIDGFCKKGFLDDALLAVEE 211

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
               G   +V  ++ALI+ Y + G    A  +   M+   +KP++VTY+ +I   C  G 
Sbjct: 212 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 271

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           +D     ++   ML+ GV PD IT++SL+  +C    L +A   LF  M+  G+  D FT
Sbjct: 272 LD--SAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE-LFENMLQLGVQPDEFT 328

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y TL+D  CK   ++ A  +  EM  K + P+VVTYS +I+G +K+ R  +A  +  ++ 
Sbjct: 329 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY 388

Query: 397 FLGIGLDRVSYNTVL---------SIYAKL------GRFEEALLVCKEMESSGIRKDAVT 441
                 D + Y+ ++         S+ A L      G  +EA  V + M     + D   
Sbjct: 389 HEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSV 448

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y+ L+ G+ + G   +     +QM     SPN  +  +L+    + G+  EA    ++  
Sbjct: 449 YSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 508

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
                AD     ALID   K G V++ + +L  M ++G+ P+
Sbjct: 509 TCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 550



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 125/266 (46%), Gaps = 27/266 (10%)

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           G+  +V  Y+ L+ ALC  G +E AV ++ +M   G  PN VTYN+++ AF R+      
Sbjct: 5   GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE---- 60

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQ---EAGRTDNQIIKVFGQLVAEKAG------ 614
           +D  ER +   +E  N        +  V    +AGR +    KVF ++V E         
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR-KVFDEMVREGLAPDVVSY 119

Query: 615 ----QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                G  +  C  E L    VF +M +  + P+VVTF+++++A  +  + E A  L+ +
Sbjct: 120 NTLLSGYCKVGCLHESL---AVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 176

Query: 671 LR---LFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHF 726
           +R   L  N+V   A  L+ G+ +      AL   +E++      +   YNAL +     
Sbjct: 177 MRERGLRMNEVTFTA--LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKL 234

Query: 727 GQKRGAQLVVLEGKRRQVWENVWSES 752
           G+   A+ ++ E + ++V  +V + S
Sbjct: 235 GRMDLARELIREMEAKRVKPDVVTYS 260


>gi|414888267|tpg|DAA64281.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
          Length = 873

 Score =  225 bits (574), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 172/696 (24%), Positives = 313/696 (44%), Gaps = 106/696 (15%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK--NI 215
           D+  + RE   RG+W ++++ F +  ++   + D+  + + +I +LGR G   L K   +
Sbjct: 105 DFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDE-HIHAIVIGVLGRQGPALLDKCLEV 163

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
           F     E    T  ++++LI+AY R+   +EA ++ + MK                    
Sbjct: 164 FHDLPAES--RTALSYTSLIAAYARNALHEEARALLDQMKA------------------- 202

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG----LWEAARNLFNEMVHRG-- 329
                             GV P   T+N++LA C+R       ++    LF EM H    
Sbjct: 203 -----------------TGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASP 245

Query: 330 -IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            +  D+ TYNTLL A    +  D +  ++  M    +SP+ V+Y  ++D +A AG L  A
Sbjct: 246 SVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAFASAGNLSRA 305

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             +FSEM   G   D  +Y  ++  + ++G   +A+ V ++M++ G    A TY  LL  
Sbjct: 306 AELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDL 365

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           YG+QG++D VR++F +M+   V P+  TY+ L  V+  GG +KE +++F +  + G++ D
Sbjct: 366 YGRQGRFDGVRQLFREMRT-AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPD 424

Query: 509 VVL-----------------------------------YSALIDALCKNGLVESAVSLLD 533
           +V                                    Y+ L++AL    + E A    +
Sbjct: 425 MVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFN 484

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSA---TTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
            MT+ G  P + TYN++  A+ R       E     +  + G QK   + DA+     + 
Sbjct: 485 MMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALI----EA 540

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV-------FQKMHKLKIKP 643
             +  R D+  +K + ++   +    ++         CI GV       F+++      P
Sbjct: 541 YCQGSRLDDA-VKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMP 599

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRL-FDNQVYGVAHGLLMGYRDNI--WVQALSL 700
           +V+ +  +L+  +R + + DA  LLEE++    +  + V   L+ G  D+   W     +
Sbjct: 600 SVIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASLIKGEYDDSSNWQMVEYV 659

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES----CLDL 756
            +   +     +  F+NAL  +LW FGQK  A  V+ +  +  ++  ++ ++     LD+
Sbjct: 660 LENSTMEGCDYSFRFFNALLGVLWWFGQKGRAARVLDQAVKFGLFPELYRDTKLVWSLDV 719

Query: 757 HLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSIL 792
           H MS G A   V  WL  ++  + E  +LP+L S++
Sbjct: 720 HRMSMGGALVAVSVWLNKLYDRLVEDEDLPQLASVV 755


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 209/389 (53%), Gaps = 9/389 (2%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +++ L + GK+D+A  +FE   N      V A+S LI+   ++G   EA  +F  M+  +
Sbjct: 153 LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENS 212

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +P++VT+ A++D   KG    +   ++ + M      P+ IT++SL+    + G    A
Sbjct: 213 CEPDVVTFTALMDGLCKGD-RLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDA 271

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           + +F  M+ RGI+ ++ TYN+L+   C    +D A  +M EM A    P+++TY+T+IDG
Sbjct: 272 QEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDG 331

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K GR  +A  +F +MK      D ++Y+ ++  + KL R + A  +  +M    +  D
Sbjct: 332 LCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPD 391

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VT++ L+ GY   G  D+  R+ E+M A   SP++ TY++L+D + K G   EA ++ +
Sbjct: 392 VVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLK 451

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
              + G + +VV Y+ALIDA C+ G    A  LL+EM   G++PNV+TY S+I  F    
Sbjct: 452 RMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGF---- 507

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQD 587
              C   D+E +  K  E    D  C  D
Sbjct: 508 ---CGTGDLE-EARKMLERLERDENCKAD 532



 Score =  216 bits (550), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 157/554 (28%), Positives = 265/554 (47%), Gaps = 54/554 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    R  KVD A  +F   +  G    +  ++ L+S   R+G   EA  + + M+ 
Sbjct: 81  STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 140

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGL 314
             L+P+  +Y+ ++   C  G +D    +++F+D       PD + +++L+A +C  G L
Sbjct: 141 RGLQPDKFSYDTLMAGLCKTGKIDM--ALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRL 198

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA + LF +M     + D+ T+  L+D +CKG ++  A +++  M  +N +PNV+TYS+
Sbjct: 199 DEACK-LFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 257

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDG  K G++ DA  +F  M   GI  + V+YN+++  +      + ALL+ +EM ++G
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D +TYN L+ G  K G+  E  R+F  MKA   +P+++TYS LI  + K      A 
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 377

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +F +  +  +  DVV +S L++  C  GLV+ A  LL+EM      P+V TY S++D F
Sbjct: 378 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 437

Query: 555 ---GRSATTECTVDDVERDLGKQKE----SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
              GR       +  + +  G Q      +A +DA C         AG+       V  +
Sbjct: 438 CKVGRMVEARRVLKRMAKR-GCQPNVVTYTALIDAFC--------RAGKP-----TVAYK 483

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
           L+ E  G G                        ++PNV+T+ +++         E+A  +
Sbjct: 484 LLEEMVGNG------------------------VQPNVITYRSLIGGFCGTGDLEEARKM 519

Query: 668 LEELRLFDN-QVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLW 724
           LE L   +N +    A+ ++M    R      AL L + +K   +      Y AL   L 
Sbjct: 520 LERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLC 579

Query: 725 HFGQKRGAQLVVLE 738
             G++ G  + VLE
Sbjct: 580 Q-GKELGKAMEVLE 592



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 239/489 (48%), Gaps = 25/489 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI  L +  ++  A   F     +G     + ++ LI+ + +      A  +   MK 
Sbjct: 11  TIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE 70

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             L PN+VTY+ VI   C +  VD  +  ++F  M+ NG  P+ +T+N+LL+   R GL 
Sbjct: 71  SGLAPNVVTYSTVIHGFCRQTKVDTAY--KLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 128

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  L +EM  RG+  D F+Y+TL+  +CK  ++D+A ++  +    +  P+VV YST+
Sbjct: 129 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 188

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G  K GRLD+A  +F +M+      D V++  ++    K  R +EA  V + ME    
Sbjct: 189 IAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 248

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + +TY++L+ G  K G+  + + +F++M    + PN++TY++LI  +        A+ 
Sbjct: 249 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL 308

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +  E    G   D++ Y+ LID LCK G    A  L  +M  +   P+V+TY+ +I  F 
Sbjct: 309 LMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF- 367

Query: 556 RSATTECTVDDVER------DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
                 C ++ ++       D+ KQ    ++    S   +    AG  D+   ++  ++V
Sbjct: 368 ------CKLERIDMARTLFDDMLKQAVLPDVVTF-STLVEGYCNAGLVDDA-ERLLEEMV 419

Query: 610 AEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
           A              +  C +G       V ++M K   +PNVVT++A+++A  R     
Sbjct: 420 ASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPT 479

Query: 663 DASMLLEEL 671
            A  LLEE+
Sbjct: 480 VAYKLLEEM 488



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 224/446 (50%), Gaps = 36/446 (8%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V  ++ +I    ++    EA + F  MK+    PN  TYN +I+  C    V   ++  +
Sbjct: 7   VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL--L 64

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             +M  +G+ P+ +T+++++    R    + A  LF +MV  G   ++ TYNTLL  +C+
Sbjct: 65  LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 124

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              MD A+E++ EM  + + P+  +Y T++ G  K G++D AL +F +        D V+
Sbjct: 125 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 184

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y+T+++   K GR +EA  + ++M  +    D VT+ AL+ G  K  +  E +++ E M+
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
               +PN++TYS+LID   K G  ++A ++F+     G++ +VV Y++LI   C    V+
Sbjct: 245 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVD 304

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES-ANLDAMCS 585
           SA+ L++EMT  G  P+++TYN++ID   ++        +  R  G  K    N D +  
Sbjct: 305 SALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAP----EANRLFGDMKAKFCNPDVI-- 358

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
                      T + +I  F +L  E+    +              +F  M K  + P+V
Sbjct: 359 -----------TYSCLIGGFCKL--ERIDMART-------------LFDDMLKQAVLPDV 392

Query: 646 VTFSAILNACSRCNSFEDASMLLEEL 671
           VTFS ++         +DA  LLEE+
Sbjct: 393 VTFSTLVEGYCNAGLVDDAERLLEEM 418



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 205/396 (51%), Gaps = 8/396 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L   G   +A  C  F   RE          +A++  L +  ++  A+ + ET
Sbjct: 185 YSTLIAGLCKTGRLDEA--CKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
             +      V  +S+LI    ++G  ++A  VF  M    ++PN+VTYN++I   C   G
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           VD    + + ++M   G  PD IT+N+L+  +C  G   EA R LF +M  +  + D+ T
Sbjct: 303 VD--SALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANR-LFGDMKAKFCNPDVIT 359

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y+ L+   CK  ++D+A  +  +M  + + P+VVT+ST+++GY  AG +DDA  +  EM 
Sbjct: 360 YSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMV 419

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
                 D  +Y +++  + K+GR  EA  V K M   G + + VTY AL+  + + GK  
Sbjct: 420 ASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPT 479

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF-KQAGLKADVVLYSAL 515
              ++ E+M  + V PN++TY +LI  +   G  +EA ++     +    KAD+  Y  +
Sbjct: 480 VAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVM 539

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +D LC+ G + +A+ LL+ + + G  P    Y ++I
Sbjct: 540 MDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALI 575



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 167/341 (48%), Gaps = 31/341 (9%)

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
           ++++ T+  ++D +CK  ++  A    A+M  K   PN  TY+ +I+G+ K  ++  A  
Sbjct: 4   EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +  EMK  G+  + V+Y+TV+  + +  + + A  + ++M  +G   + VTYN LL G  
Sbjct: 64  LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           + G  DE   + ++M+   + P+  +Y TL+    K G    A+++F +        DVV
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            YS LI  LCK G ++ A  L ++M +    P+VVT+ +++D         C  D +   
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGL-------CKGDRL--- 233

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
              Q+    L+ M   +D++      T + +I         K GQ +             
Sbjct: 234 ---QEAQQVLETM---EDRNCTPNVITYSSLIDGLC-----KTGQVRDAQE--------- 273

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            VF++M    I+PNVVT++++++     N  + A +L+EE+
Sbjct: 274 -VFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 313



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 106/227 (46%), Gaps = 19/227 (8%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G VD A+ + E  +       VY +++L+  + + G   EA  V   M +   +PN+VTY
Sbjct: 406 GLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTY 465

Query: 267 NAVIDA---CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLF 322
            A+IDA    GK  V +K    + ++M+ NGVQP+ IT+ SL+   C  G L EA + L 
Sbjct: 466 TALIDAFCRAGKPTVAYK----LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLE 521

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
                     D+F Y  ++D +C+  +M  A E++  +      P    Y  +I G  + 
Sbjct: 522 RLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQG 581

Query: 383 GRLDDALNMFSEMKFLGIGLDRVS------YNTVLSIYAKLGRFEEA 423
             L  A+ +  EM      L R S      Y  V+   A+ GR EEA
Sbjct: 582 KELGKAMEVLEEMT-----LSRKSRPNAEAYEAVIQELAREGRHEEA 623


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 250/489 (51%), Gaps = 27/489 (5%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +++ L + GK+D+A  +FE   N      V A+S LI+   ++G   EA  +F  M+  +
Sbjct: 272 LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENS 331

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +P++VT+ A++D   KG    +   ++ + M      P+ IT++SL+    + G    A
Sbjct: 332 CEPDVVTFTALMDGLCKGD-RLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDA 390

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           + +F  M+ RGI+ ++ TYN+L+   C    +D A  +M EM A    P+++TY+T+IDG
Sbjct: 391 QEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDG 450

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K GR  +A  +F +MK      D ++Y+ ++  + KL R + A  +  +M    +  D
Sbjct: 451 LCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPD 510

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VT++ L+ GY   G  D+  R+ E+M A   SP++ TY++L+D + K G   EA ++ +
Sbjct: 511 VVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLK 570

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
              + G + +VV Y+ALIDA C+ G    A  LL+EM   G++PNV+TY S+I  F  + 
Sbjct: 571 RMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTG 630

Query: 559 TTE---CTVDDVERDLGKQKE----SANLDAMCSQDD--------KDVQEAGRTDNQIIK 603
             E     ++ +ERD   + +       +D +C            + ++++G      I 
Sbjct: 631 DLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIY 690

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH-KLKIKPNVVTFSAILNACSRCNSFE 662
           V    +     QGK+  +  +       V ++M    K +PN   + A++   +R    E
Sbjct: 691 V---ALIRGLCQGKELGKAME-------VLEEMTLSRKSRPNAEAYEAVIQELAREGRHE 740

Query: 663 DASMLLEEL 671
           +A+ L +EL
Sbjct: 741 EANALADEL 749



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 262/553 (47%), Gaps = 52/553 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    R  KVD A  +F   +  G    +  ++ L+S   R+G   EA  + + M+ 
Sbjct: 200 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 259

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             L+P+  +Y+ ++   C  G +D    +++F+D       PD + +++L+A   + G  
Sbjct: 260 RGLQPDKFSYDTLMAGLCKTGKIDM--ALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRL 317

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  LF +M     + D+ T+  L+D +CKG ++  A +++  M  +N +PNV+TYS++
Sbjct: 318 DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSL 377

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K G++ DA  +F  M   GI  + V+YN+++  +      + ALL+ +EM ++G 
Sbjct: 378 IDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC 437

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D +TYN L+ G  K G+  E  R+F  MKA   +P+++TYS LI  + K      A  
Sbjct: 438 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART 497

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF- 554
           +F +  +  +  DVV +S L++  C  GLV+ A  LL+EM      P+V TY S++D F 
Sbjct: 498 LFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFC 557

Query: 555 --GRSATTECTVDDVERDLGKQKE----SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
             GR       +  + +  G Q      +A +DA C         AG+       V  +L
Sbjct: 558 KVGRMVEARRVLKRMAKR-GCQPNVVTYTALIDAFC--------RAGKP-----TVAYRL 603

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
           + E  G G                        ++PNV+T+ +++         E+A  +L
Sbjct: 604 LEEMVGNG------------------------VQPNVITYRSLIGGFCGTGDLEEARKIL 639

Query: 669 EELRLFDN-QVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWH 725
           E L   +N +    A+ ++M    R      AL L + +K   +      Y AL   L  
Sbjct: 640 ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQ 699

Query: 726 FGQKRGAQLVVLE 738
            G++ G  + VLE
Sbjct: 700 -GKELGKAMEVLE 711



 Score =  211 bits (537), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 151/513 (29%), Positives = 247/513 (48%), Gaps = 73/513 (14%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI  L +  ++  A   F     +G     + ++ LI+ + +      A  +   MK 
Sbjct: 130 TIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE 189

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             L PN+VTY+ VI   C +  VD  +  ++F  M+ NG  P+ +T+N+LL+   R GL 
Sbjct: 190 SGLAPNVVTYSTVIHGFCRQTKVDTAY--KLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 247

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  L +EM  RG+  D F+Y+TL+  +CK  ++D+A ++  +    +  P+VV YST+
Sbjct: 248 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 307

Query: 376 IDGYAKAGRLDDALNMFSEMK----------FLGI--GL---DR---------------- 404
           I G  KAGRLD+A  +F +M+          F  +  GL   DR                
Sbjct: 308 IAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 367

Query: 405 ----VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
               ++Y++++    K G+  +A  V K M   GI  + VTYN+L+ G+      D    
Sbjct: 368 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL 427

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + E+M A    P+++TY+TLID   K G   EA ++F + K      DV+ YS LI   C
Sbjct: 428 LMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFC 487

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           K   ++ A +L D+M K+ + P+VVT++++++ +  +      VDD ER L +   S   
Sbjct: 488 KLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAG----LVDDAERLLEEMVASD-- 541

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE--KAGQGKKENRCRQEILCILGVFQKMHK 638
              CS D              +  +  LV    K G+  +  R          V ++M K
Sbjct: 542 ---CSPD--------------VYTYTSLVDGFCKVGRMVEARR----------VLKRMAK 574

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              +PNVVT++A+++A  R      A  LLEE+
Sbjct: 575 RGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEM 607



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 205/396 (51%), Gaps = 8/396 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L   G   +A  C  F   RE          +A++  L +  ++  A+ + ET
Sbjct: 304 YSTLIAGLCKAGRLDEA--CKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 361

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
             +      V  +S+LI    ++G  ++A  VF  M    ++PN+VTYN++I   C   G
Sbjct: 362 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 421

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           VD    + + ++M   G  PD IT+N+L+  +C  G   EA R LF +M  +  + D+ T
Sbjct: 422 VD--SALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANR-LFGDMKAKFCNPDVIT 478

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y+ L+   CK  ++D+A  +  +M  + + P+VVT+ST+++GY  AG +DDA  +  EM 
Sbjct: 479 YSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMV 538

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
                 D  +Y +++  + K+GR  EA  V K M   G + + VTY AL+  + + GK  
Sbjct: 539 ASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPT 598

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF-KQAGLKADVVLYSAL 515
              R+ E+M  + V PN++TY +LI  +   G  +EA +I     +    KAD+  Y  +
Sbjct: 599 VAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVM 658

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +D LC+ G + +A+ LL+ + + G  P    Y ++I
Sbjct: 659 MDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALI 694



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 230/538 (42%), Gaps = 104/538 (19%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDF 280
            +G+ + VY ++ L  A  R+    E   +  +     + PN+ TY  VI    K G D 
Sbjct: 17  QQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSG-DL 75

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLL-AVCSR--------------------------GG 313
               E+ ++M  +G  PD   +N ++ A+C                             G
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDG 135

Query: 314 LWEAAR-----NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
           L +A R       F +M  +G   + +TYN L++  CK  ++  A+ ++ EM    ++PN
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 195

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           VVTYST+I G+ +  ++D A  +F +M   G   + V+YNT+LS   + G  +EA  +  
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 255

Query: 429 EMESSGIR-----------------------------------KDAVTYNALLGGYGKQG 453
           EM   G++                                    D V Y+ L+ G  K G
Sbjct: 256 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAG 315

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           + DE  ++FE+M+ +   P+++T++ L+D   KG   +EA Q+    +      +V+ YS
Sbjct: 316 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 375

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           +LID LCK G V  A  +   M   GI PNVVTYNS+I  F       C  + V+  L  
Sbjct: 376 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF-------CMTNGVDSALLL 428

Query: 574 QKE-------------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
            +E             +  +D +C        + GR   +  ++FG + A+         
Sbjct: 429 MEEMTATGCLPDIITYNTLIDGLC--------KTGRAP-EANRLFGDMKAKFCNPDVITY 479

Query: 621 RCRQEILCIL-------GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            C     C L        +F  M K  + P+VVTFS ++         +DA  LLEE+
Sbjct: 480 SCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM 537



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 112/275 (40%), Gaps = 65/275 (23%)

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           +  G   +  TYN L     +  + DE   + +      ++PN+ TY+ +I    K G  
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCK---------------------------NG 523
            +A ++  E +++G   D  +Y+ +I ALCK                           +G
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDG 135

Query: 524 LVES-----AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
           L ++     A +   +M K+G  PN  TYN +I+ F       C V  V R     KE  
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGF-------CKVHKVHRAYLLLKE-- 186

Query: 579 NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMH 637
                       ++E+G   N +   +  ++            CRQ ++     +F++M 
Sbjct: 187 ------------MKESGLAPNVV--TYSTVI---------HGFCRQTKVDTAYKLFRQMV 223

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           +    PN+VT++ +L+   R    ++A  LL+E+R
Sbjct: 224 ENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR 258


>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 160/576 (27%), Positives = 274/576 (47%), Gaps = 29/576 (5%)

Query: 124 VAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAV 183
           + E+ LH + +F   D S  ++L+          D   LL+ L   G W KA+  F ++V
Sbjct: 127 IIEQPLHSLASFF--DSSKYELLQV---------DLISLLKALDYSGNWEKALLLFEWSV 175

Query: 184 KREERKNDQ--GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
                 N++        M+ ILGR  +  +A  +F+    + Y   V A++ ++ AY R+
Sbjct: 176 LNLGIANEKIDRHAIELMVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRT 235

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
           G    AI +F  M    L P+LVTYN ++D  GK G  +  ++E+ D+M   G+  D  T
Sbjct: 236 GKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFT 295

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
            +++L+ C R GL + AR  F+ +   G      TYN LL    K      A  +++EM 
Sbjct: 296 CSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEME 355

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
             N  P+ VTY+ ++  Y +AG  ++   +   M   GI  + V+Y T+++ Y ++G  +
Sbjct: 356 ENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDID 415

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           +AL +  +M   G   +  TYNA+LG  GK+   +E+ ++   MK +  SPN +T++T++
Sbjct: 416 KALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTML 475

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
            +  K G++K   Q+FRE K  G + D   ++ LI A  + G    A  + +EM K G  
Sbjct: 476 AMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFS 535

Query: 542 PNVVTYNSIIDAFGRSA---TTECTVDDVERDLGKQKESANLDAMCSQDDK-------DV 591
           P + TYN++++A  R       E  + D+ R+ G +    +   M     K       ++
Sbjct: 536 PCINTYNALLNALARRGDWKAAESVILDM-RNKGFRPSETSYSLMVHSYAKGGNVKGIEM 594

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
            E    D  I   +  L        K    CR  +  +   FQ + K   KP++V  +++
Sbjct: 595 IEKSIYDGDIFPSWMLLRTLVLANFK----CRS-LTGMERAFQALQKHGYKPDLVLCNSM 649

Query: 652 LNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM 687
           L+  ++ N ++ A  +L  +     Q   V H  LM
Sbjct: 650 LSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLM 685



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 183/360 (50%), Gaps = 3/360 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+  GR+G +D A  +F+  +  G    V  ++A++   G+    +E + +   MK 
Sbjct: 402 TTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKL 461

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               PN +T+N ++  CGK G+  K+V ++F +M   G +PDR TFN+L++   R G   
Sbjct: 462 NGCSPNHITWNTMLAMCGKKGMH-KYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNN 520

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +  EM+  G    I TYN LL+A+ +      A  ++ +M  K   P+  +YS M+
Sbjct: 521 DAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMV 580

Query: 377 DGYAKAGRLDDALNMFSEMKFLG-IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
             YAK G +   + M  +  + G I    +   T++    K           + ++  G 
Sbjct: 581 HSYAKGGNVK-GIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGY 639

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D V  N++L  + K   YD    M   +    + P+L+T+++L+D+Y++GG   +A +
Sbjct: 640 KPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEE 699

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           + R  + +G K D+V Y+ +I   C+ GL++  + +L EMT  G+ P + TYN+ I  + 
Sbjct: 700 VLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYA 759



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 146/340 (42%), Gaps = 36/340 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + M+++ G+ G       +F    N G+      F+ LISAYGR G   +A  +   M +
Sbjct: 472 NTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIK 531

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG--- 313
               P + TYNA+++A  + G D+K    +  DM   G +P   +++ ++   ++GG   
Sbjct: 532 AGFSPCINTYNALLNALARRG-DWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVK 590

Query: 314 ----------------LWEAARNL----------------FNEMVHRGIDQDIFTYNTLL 341
                            W   R L                F  +   G   D+   N++L
Sbjct: 591 GIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSML 650

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
               K    D A E++  +    + P++VT+++++D YA+ G    A  +   ++  G  
Sbjct: 651 SIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGK 710

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D VSYNTV+  + + G  +E + +  EM S G+     TYN  + GY  QG + E+  +
Sbjct: 711 PDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDV 770

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
              M      PN LTY  + D Y K   Y EA+    + K
Sbjct: 771 ISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIK 810



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/347 (21%), Positives = 137/347 (39%), Gaps = 69/347 (19%)

Query: 382 AGRLDDALNMFS-EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK--- 437
           +G  + AL +F   +  LGI  +++  + +  +   LGR  +  +  K  +   +     
Sbjct: 161 SGNWEKALLLFEWSVLNLGIANEKIDRHAIELMVRILGRESQHTVASKLFDVIPLDDYVL 220

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL-YKEAMQI 496
           D   Y  +L  Y + GKY     +FE+M    +SP+L+TY+ ++DVY K G  + + +++
Sbjct: 221 DVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILEL 280

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             E +  GL  D    S ++ A  + GL++ A      +  EG +P  VTYN+++  FG+
Sbjct: 281 LDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGK 340

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
           +                   S  L  +   ++ +      T N+++  + +    + G  
Sbjct: 341 AGIF----------------SEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAV 384

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
                          V   M    I PN VT++ I+NA  R    +              
Sbjct: 385 ---------------VIDAMASKGIMPNAVTYTTIINAYGRVGDID-------------- 415

Query: 677 QVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
                              +AL +FD++  +      A YNA+  ML
Sbjct: 416 -------------------KALEMFDQMMELGCVPNVATYNAVLGML 443


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 116/339 (34%), Positives = 195/339 (57%), Gaps = 1/339 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    V  ++ L++A+ R+G    A  +   M+   ++P+LVT+N V++   K G   + 
Sbjct: 185 GCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAG-RMED 243

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             ++FD+M R G+ PD +++N+L++   + G    A  +F EM  +G+  D+ T+ +L+ 
Sbjct: 244 ARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIH 303

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A+C+   ++ A  ++ +M  + +  N  T++ +IDG+ + G LDDAL    EM+   I  
Sbjct: 304 AMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQP 363

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
             V YN +++ Y KLGR +EA  +  EME+ G++ D VTY+ +L GY K G  D    + 
Sbjct: 364 SVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELN 423

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +M    V P+ +TYS+LI    +     +A ++F +  Q GL+ D   Y+ LID  CK 
Sbjct: 424 RKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKE 483

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           G V+ A+SL DEM K+G+ P+VVTY+ +ID   +SA T+
Sbjct: 484 GNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTK 522



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 208/393 (52%), Gaps = 2/393 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+R L  RG+  +A+      + R           + +++   R G+VD A+ +   
Sbjct: 157 YNILVRALCARGQREEALGVVGDDM-RGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGV 215

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G   ++  F+ +++   ++G  ++A  +F+ M R  L P+ V+YN ++    K G 
Sbjct: 216 MREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGC 275

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                + +F +M + GV PD +TF SL+    R G  E A  L  +M  RG+  + FT+ 
Sbjct: 276 -LHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFT 334

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+D  C+   +D A   M EM    I P+VV Y+ +I+GY K GR+D+A  +  EM+  
Sbjct: 335 ALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAK 394

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D V+Y+T+LS Y K+G  + A  + ++M   G+  DA+TY++L+ G  ++ +  + 
Sbjct: 395 GMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDA 454

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +FE+M    + P+  TY+TLID + K G  ++A+ +  E  + G+  DVV YS LID 
Sbjct: 455 CELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDG 514

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           L K+   + A  LL ++  E   P+ + Y +++
Sbjct: 515 LSKSARTKEAQRLLFKLYYEDPVPDNIKYEALM 547



 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 230/449 (51%), Gaps = 32/449 (7%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           GY  ++ A++A++ A   +     A  +  SM R  + PN+ TYN ++ A    G   + 
Sbjct: 115 GYAPSLLAYNAVLLALSDASL-PSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           +  + DDM   G  P+ +T+N+L+A   R G  +AA  L   M   G+   + T+NT+++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            +CK  +M+ A ++  EM  + ++P+ V+Y+T++ GY KAG L +AL +F+EM   G+  
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D V++ +++    + G  E A+ +  +M   G+R +  T+ AL+ G+ + G  D+     
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           ++M+   + P+++ Y+ LI+ Y K G   EA ++  E +  G+K DVV YS ++   CK 
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           G  +SA  L  +M K+G+ P+ +TY+S+I                ER LG        DA
Sbjct: 414 GDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCE-----------ERRLG--------DA 454

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
            C   +K +Q   + D      +  L+     +G  +          L +  +M K  + 
Sbjct: 455 -CELFEKMLQLGLQPDE---FTYTTLIDGHCKEGNVQK--------ALSLHDEMIKKGVL 502

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEEL 671
           P+VVT+S +++  S+    ++A  LL +L
Sbjct: 503 PDVVTYSVLIDGLSKSARTKEAQRLLFKL 531



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/440 (23%), Positives = 192/440 (43%), Gaps = 84/440 (19%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +++ L + G+++ A+ +F+    EG      +++ L+S Y ++G   EA++VF  M +
Sbjct: 229 NTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQ 288

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHV------------------VEIFDDMLRNG---- 294
             + P++VT+ ++I A  + G   + V                    + D   RNG    
Sbjct: 289 KGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDD 348

Query: 295 ------------VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
                       +QP  + +N L+    + G  + AR L +EM  +G+  D+ TY+T+L 
Sbjct: 349 ALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILS 408

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
             CK    D AFE+  +M  K + P+ +TYS++I G  +  RL DA  +F +M  LG+  
Sbjct: 409 GYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQP 468

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D  +Y T++  + K G  ++AL +  EM   G+  D VTY+ L+ G  K  +  E +R+ 
Sbjct: 469 DEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLL 528

Query: 463 EQM-----------------------------------------KADCVSPNLL------ 475
            ++                                         +AD V  ++L      
Sbjct: 529 FKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKL 588

Query: 476 ---TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
               YS LI  + +GG   +A+   ++  + G   +     +L+  L + G+   A +++
Sbjct: 589 DGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVI 648

Query: 533 DEMTKEGIRPNVVTYNSIID 552
            E+       +  T  ++ID
Sbjct: 649 QELLNCCSLADAETSKALID 668



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 173/382 (45%), Gaps = 20/382 (5%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +T L+  +   G   +A+       +R  R N+     +A+I    R G +D A    + 
Sbjct: 298 FTSLIHAMCRAGNLERAVALVGQMRERGLRMNE--FTFTALIDGFCRNGFLDDALLAMKE 355

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                   +V  ++ LI+ Y + G   EA  + + M+   +KP++VTY+ ++    K G 
Sbjct: 356 MRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG- 414

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           D     E+   ML+ GV PD IT++SL+  +C    L +A   LF +M+  G+  D FTY
Sbjct: 415 DTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDAC-ELFEKMLQLGLQPDEFTY 473

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TL+D  CK   +  A  +  EM  K + P+VVTYS +IDG +K+ R  +A  +  ++ +
Sbjct: 474 TTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYY 533

Query: 398 LGIGLDRVSYNTVL---------SIYAKL------GRFEEALLVCKEMESSGIRKDAVTY 442
                D + Y  ++         S+ A L      G   +A  V + M     + D   Y
Sbjct: 534 EDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVY 593

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           + L+ G+ + G   +     +Q+     SPN  +  +L+    + G+  EA  + +E   
Sbjct: 594 SVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLN 653

Query: 503 AGLKADVVLYSALIDALCKNGL 524
               AD     ALID   K G+
Sbjct: 654 CCSLADAETSKALIDLNRKEGV 675



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 146/327 (44%), Gaps = 45/327 (13%)

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G     + YNA+L            RR+   M  D V+PN+ TY+ L+      G  +EA
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 494 MQIF-REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           + +   + + AG   +VV Y+ L+ A C+ G V++A  L+  M + G+RP++VT+N++++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 553 AF---GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
                GR        D++ R+                    +   G + N ++  +    
Sbjct: 234 GLCKAGRMEDARKMFDEMARE-------------------GLTPDGVSYNTLVSGYC--- 271

Query: 610 AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
             KAG       C  E L    VF +M +  + P+VVTF+++++A  R  + E A  L+ 
Sbjct: 272 --KAG-------CLHEAL---AVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVG 319

Query: 670 ELR---LFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWH 725
           ++R   L  N+    A  L+ G+ R+     AL    E++      +   YN L +    
Sbjct: 320 QMRERGLRMNEFTFTA--LIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCK 377

Query: 726 FGQKRGAQLVVLEGKRRQVWENVWSES 752
            G+   A+ ++ E + + +  +V + S
Sbjct: 378 LGRMDEARELIHEMEAKGMKPDVVTYS 404


>gi|27545040|gb|AAO18446.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
 gi|108711829|gb|ABF99624.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 863

 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 171/704 (24%), Positives = 326/704 (46%), Gaps = 37/704 (5%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK--NI 215
           D+  + RE   RG+W ++++ F +  ++   + D+  + + +I +LGR G   L K   +
Sbjct: 100 DFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDE-HIHAIVIGVLGRQGPALLDKCLEV 158

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
           F    +E    T  ++++LI+AY R+   +EA  + + MK   + P   TYN V+ AC +
Sbjct: 159 FHDLPSES--RTALSYTSLIAAYARNALHEEARELLDQMKASGVAPTAATYNTVLAACAR 216

Query: 276 GG---VDFKHVVEIFDDMLRN---GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
                V F  ++ +F +M  +    V+PD  T+N+LLA  +   L + +  L   M+  G
Sbjct: 217 ATDPPVPFDMLLGLFAEMRHDPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLEAG 276

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  D  +Y  ++DA      +    E+ AEM A   +P+   Y  +++ +   G   +A+
Sbjct: 277 VLPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAEAV 336

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            +  +M+  G      +Y  +L +Y + GRF+    + +EM ++ +  D  TYN L   +
Sbjct: 337 AVLRQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELFREMRTT-VPPDTATYNVLFRVF 395

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
           G  G + EV  +F+ M    V P++ T   ++    +GGL+++A ++       G+    
Sbjct: 396 GDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTA 455

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA---TTECTVDD 566
             Y+ L++AL    + E A    + MT+ G  P + TYN++ +AF +       E     
Sbjct: 456 KAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKGGLFQEAEAIFSR 515

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
           +  +   QK+  + DA+      +    G   +  +K + ++   +    ++        
Sbjct: 516 MTNNAAIQKDKDSFDALI-----EAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNA 570

Query: 627 LCILGV-------FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL-FDNQV 678
            CI GV       F+++  +   P+++ +  +L+  +R + + DA  LLEE++    +  
Sbjct: 571 YCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASST 630

Query: 679 YGVAHGLLMGYRDNI--WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVV 736
           + V   ++ G  D+   W     + D   L     +  F+NAL D+LW FGQK  A  V+
Sbjct: 631 HQVIASMIKGEYDDDSNWQMVEYVLDNSNLEGCDYSLRFFNALLDVLWWFGQKGRAARVL 690

Query: 737 LEGKRRQVWENVWSESCL----DLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLS-- 790
            +  +  ++  ++ ++ L    D+H MS G +   V  WL  ++  +    +LP+L S  
Sbjct: 691 DQALKYGLFPELFRDTKLVWSADVHRMSVGGSLVAVSVWLNKLYDRLKGDEDLPQLASVV 750

Query: 791 ILTGWGKHSKVVGDGALRRAVEVLLTG-MGAPFWVANCNLGRFI 833
           +L G  + S V     + + V   L   + + F     N GR I
Sbjct: 751 VLRGQMEKSTVTRGLPIAKVVYSFLNDTLSSSFHYPKWNKGRII 794


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 202/365 (55%), Gaps = 1/365 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI  L + G ++ ++ +F      G    V  +++LI  YG+ G  +E  S+FN MK 
Sbjct: 293 NVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD 352

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+++TYN +I+ C           E F +M  NG++P+ +T+++L+    + G+ +
Sbjct: 353 VGCVPDIITYNGLIN-CYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQ 411

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF +M   G+  + FTY +L+DA CK   +  A++++ +M    +  N+VTY+ ++
Sbjct: 412 GAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALL 471

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  KAGR+ +A  +F  M   GI  ++  Y  ++  Y K  R E+A+ + K+M    I+
Sbjct: 472 DGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIK 531

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D + Y +++ G+  Q K +E + + E+MK+  +S N +  +T+ID Y K G   +A+  
Sbjct: 532 PDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNF 591

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F+E +  G++A +V Y  LID LCK G+VE AV     M   G++PNV  Y S+ID   +
Sbjct: 592 FQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCK 651

Query: 557 SATTE 561
           +   E
Sbjct: 652 NNCIE 656



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 216/418 (51%), Gaps = 11/418 (2%)

Query: 143 GDILKKFEFKLCGAD------DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA 196
           G +++KF   + GA        Y  ++  L   G+   + +   F   RE   +      
Sbjct: 270 GQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRR--LFVQMREMGLSPDVVTY 327

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I   G++G ++   ++F    + G    +  ++ LI+ Y +      A   F+ MK 
Sbjct: 328 NSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKN 387

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             LKPN+VTY+ +IDA  K G+  +  +++F DM R G+ P+  T+ SL+ A C  G L 
Sbjct: 388 NGLKPNVVTYSTLIDAFCKEGM-MQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLT 446

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA + L N+M+  G+  +I TY  LLD +CK  +M  A E+   M    ISPN   Y+ +
Sbjct: 447 EAWK-LLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTAL 505

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + GY KA R++DA+ +  +M    I  D + Y +++  +    + EE  L+ +EM+S GI
Sbjct: 506 VHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGI 565

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + V    ++  Y K GK  +    F++M+   V   ++TY  LID   K G+ + A+ 
Sbjct: 566 SANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVD 625

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            F      GL+ +V +Y++LID LCKN  +ESA  L DEM   G+ P++  + ++ID 
Sbjct: 626 YFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDG 683



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 220/479 (45%), Gaps = 69/479 (14%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRY-------------------------------- 257
            F  L S +   G  +EA   F+ M+ +                                
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 258 ---NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               + P++ TYN +ID   K G D ++   +F  M   G+ PD +T+NSL+    + G 
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEG-DLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGS 339

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E   +LFNEM   G   DI TYN L++  CK  +M  AFE  +EM    + PNVVTYST
Sbjct: 340 LEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYST 399

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +ID + K G +  A+ +F +M+  G+  +  +Y +++    K G   EA  +  +M  +G
Sbjct: 400 LIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 459

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++ + VTY ALL G  K G+  E   +F  M  D +SPN   Y+ L+  Y K    ++AM
Sbjct: 460 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 519

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +I ++  +  +K D++LY ++I   C    +E    +L+EM   GI  N V   +IIDA+
Sbjct: 520 KILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAY 579

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            ++              GK  ++ N      Q+ +DV          + + G        
Sbjct: 580 FKA--------------GKSSDALNF----FQEMQDVGVEATIVTYCVLIDGL------- 614

Query: 615 QGKKENRCRQEILCI-LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                  C+  I+ + +  F +M  L ++PNV  ++++++   + N  E A  L +E++
Sbjct: 615 -------CKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQ 666



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 198/422 (46%), Gaps = 40/422 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+   +  K+  A   F    N G    V  +S LI A+ + G  Q AI +F  M+R
Sbjct: 363 NGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRR 422

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L PN  TY ++IDA  K G +     ++ +DML+ GV+ + +T+ +LL    + G   
Sbjct: 423 TGLLPNEFTYTSLIDANCKAG-NLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI 481

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY---- 372
            A  +F  M+  GI  +   Y  L+    K  +M+ A +I+ +M   NI P+++ Y    
Sbjct: 482 EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSII 541

Query: 373 -------------------------------STMIDGYAKAGRLDDALNMFSEMKFLGIG 401
                                          +T+ID Y KAG+  DALN F EM+ +G+ 
Sbjct: 542 WGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVE 601

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
              V+Y  ++    K G  E A+     M S G++ +   Y +L+ G  K    +  +++
Sbjct: 602 ATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKL 661

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F++M+   ++P++  ++ LID   K G  +EA+ +     +  ++ D+ +Y++L+    +
Sbjct: 662 FDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQ 721

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD---DVERDLGKQKESA 578
            G +  A    +EM ++GI P  V    ++  + +    +  ++   ++ER +G   ESA
Sbjct: 722 CGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMER-MGLITESA 780

Query: 579 NL 580
            +
Sbjct: 781 TM 782


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 195/347 (56%), Gaps = 1/347 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A +I       G G  V  ++ L++A+ R+G    A  +   M+   LKPNLVT+N++++
Sbjct: 209 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVN 268

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              K G   +   ++FD+M+R G+ PD +++N+L+    + G    A ++F EM  +GI 
Sbjct: 269 GMCKAG-KMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 327

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D+ T+ +L+  +CK   ++ A  ++ +M  + +  N VT++ +IDG+ K G LDDAL  
Sbjct: 328 PDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 387

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
              MK   I    V YN +++ Y  +GR +EA  +  EME+ G++ D VTY+ ++  Y K
Sbjct: 388 VRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCK 447

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
                    + +QM    V P+ +TYS+LI V        +A  +F+   + GL+ D   
Sbjct: 448 NCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFT 507

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           Y++LID  CK G VESA+SL D+M K G+ P+VVTY+ +I+   +SA
Sbjct: 508 YTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSA 554



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 134/419 (31%), Positives = 219/419 (52%), Gaps = 14/419 (3%)

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAAR 319
           P+++ YNAV+ A     +        FD ML +GV P+  T+N L+ A+C RG   EA  
Sbjct: 154 PSVLAYNAVLLALSDASLTSAR--RFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL- 210

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           ++  +M   G   ++ TYNTL+ A  +  ++D A  ++  M    + PN+VT+++M++G 
Sbjct: 211 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGM 270

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            KAG+++DA  +F EM   G+  D VSYNT++  Y K G   EAL V  EM   GI  D 
Sbjct: 271 CKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 330

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           VT+ +L+    K G  +    +  QM+   +  N +T++ LID + K G   +A+   R 
Sbjct: 331 VTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 390

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
            KQ  +K  VV Y+ALI+  C  G ++ A  LL EM  +G++P+VVTY++II A+ ++  
Sbjct: 391 MKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 450

Query: 560 TECTVDDVERDLGKQ------KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
           T    +  ++ L K         S+ +  +C +  K + +A      +IK  G    E  
Sbjct: 451 THSAFELNQQMLEKGVLPDAITYSSLIRVLCGE--KRLSDAHVLFKNMIK-LGLQPDEFT 507

Query: 614 GQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                +  C++  +   L +  KM K  + P+VVT+S ++N  S+     +A  LL +L
Sbjct: 508 YTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 566



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 202/396 (51%), Gaps = 9/396 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK---LASAMISILGRLGKVDLAKNI 215
           Y  L+R L  RG   +A+     ++ R+ R    G      + +++   R G+VD A+ +
Sbjct: 193 YNILVRALCGRGHRKEAL-----SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERL 247

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
                  G    +  F+++++   ++G  ++A  VF+ M R  L P+ V+YN ++    K
Sbjct: 248 VGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCK 307

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            G   +  + +F +M + G+ PD +TF SL+ V  + G  E A  L  +M  RG+  +  
Sbjct: 308 AGCSHE-ALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEV 366

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           T+  L+D  CK   +D A   +  M    I P+VV Y+ +I+GY   GR+D+A  +  EM
Sbjct: 367 TFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 426

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           +  G+  D V+Y+T++S Y K      A  + ++M   G+  DA+TY++L+     + + 
Sbjct: 427 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRL 486

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            +   +F+ M    + P+  TY++LID + K G  + A+ +  +  +AG+  DVV YS L
Sbjct: 487 SDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVL 546

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           I+ L K+     A  LL ++  E   P    Y++++
Sbjct: 547 INGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALM 582



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 187/405 (46%), Gaps = 51/405 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++M++ + + GK++ A+ +F+  + EG      +++ L+  Y ++G   EA+SVF  M +
Sbjct: 264 NSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ 323

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG--- 312
             + P++VT+ ++I    K G + +  V +   M   G+Q + +TF +L+   C +G   
Sbjct: 324 KGIMPDVVTFTSLIHVMCKAG-NLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD 382

Query: 313 -------------------------------GLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
                                          G  + AR L +EM  +G+  D+ TY+T++
Sbjct: 383 DALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTII 442

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
            A CK      AFE+  +M  K + P+ +TYS++I       RL DA  +F  M  LG+ 
Sbjct: 443 SAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQ 502

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D  +Y +++  + K G  E AL +  +M  +G+  D VTY+ L+ G  K  +  E +++
Sbjct: 503 PDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 562

Query: 462 ---------------FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
                          ++ +   C    L +   L+  +   GL  EA ++++        
Sbjct: 563 LFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWN 622

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            D  +YS LI   C+ G V  A+S   +M + G  PN  +  S+I
Sbjct: 623 LDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLI 667



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 153/332 (46%), Gaps = 16/332 (4%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           +V  ++ALI+ Y   G   EA  + + M+   LKP++VTY+ +I A  K   D     E+
Sbjct: 399 SVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKN-CDTHSAFEL 457

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              ML  GV PD IT++SL+ V         A  LF  M+  G+  D FTY +L+D  CK
Sbjct: 458 NQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCK 517

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              ++ A  +  +M    + P+VVTYS +I+G +K+ R  +A  +  ++           
Sbjct: 518 EGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTK 577

Query: 407 YNTVL---------SIYAKL------GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           Y+ ++         S+ A L      G   EA  V + M       D   Y+ L+ G+ +
Sbjct: 578 YDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCR 637

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G   +     +QM     +PN  +  +LI    + G+  EA Q+ ++       AD   
Sbjct: 638 AGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEA 697

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             ALID     G V++ + +L  M K+G+ P+
Sbjct: 698 SKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 32/239 (13%)

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G     + YNA+L            RR F+ M +D V+PN+ TY+ L+      G  KEA
Sbjct: 151 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           + I R+ + AG   +VV Y+ L+ A  + G V+ A  L+  M + G++PN+VT+NS+++ 
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
             ++   E    D  +                  D+ V+E    D      +  LV    
Sbjct: 270 MCKAGKME----DARKVF----------------DEMVREGLAPDGV---SYNTLVGGYC 306

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             G     C  E L    VF +M +  I P+VVTF+++++   +  + E A  L+ ++R
Sbjct: 307 KAG-----CSHEAL---SVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMR 357



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 117/243 (48%), Gaps = 31/243 (12%)

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M S G+  +  TYN L+     +G   E   +   M+     PN++TY+TL+  + + G 
Sbjct: 181 MLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGE 240

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
              A ++    ++ GLK ++V ++++++ +CK G +E A  + DEM +EG+ P+ V+YN+
Sbjct: 241 VDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNT 300

Query: 550 IIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
           ++  + ++              G   E+ ++ A  +Q  K +     T   +I V     
Sbjct: 301 LVGGYCKA--------------GCSHEALSVFAEMTQ--KGIMPDVVTFTSLIHVMC--- 341

Query: 610 AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
             KAG  ++           + + ++M +  ++ N VTF+A+++   +    +DA + + 
Sbjct: 342 --KAGNLERA----------VTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 670 ELR 672
            ++
Sbjct: 390 GMK 392


>gi|298712182|emb|CBJ33054.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 903

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 157/616 (25%), Positives = 274/616 (44%), Gaps = 66/616 (10%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           +Y   +    + GEW +A+    F  +    + D     + +++  G+ G+ + A  IF 
Sbjct: 302 NYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTY-NIVVAACGKAGQGEKAIEIFR 360

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                G    V +F+  ISA G  G  +EA+S+F  M+R  ++PN++T+NAV+ AC   G
Sbjct: 361 EMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNAVMSACIAAG 420

Query: 278 VDFKHVVEIFDDMLRNGVQ----------------PDRITFNSLLAVCSRGGLWEAARNL 321
             ++  ++ F +++                      D  ++N+ L+ C  G  W  A +L
Sbjct: 421 -QWEEALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACSYNTALSACEVGEQWGRALSL 479

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             +M  RG+   + +YNT++ A  K  + D A  ++ EMP + + P+V+T+++ I   + 
Sbjct: 480 LRDMPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSN 539

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           +GR DDA+ +  EM   G+  D ++Y++ L+  A  GR+E+AL + +EM+ +G+    + 
Sbjct: 540 SGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTVIC 599

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y A +   G+ GK DE   +  +M    V+PNL +YS  I    K G +++ + +  E  
Sbjct: 600 YTAAIRACGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEMP 659

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             GL  +   Y+A I      G  E AV+    M   GI+P VV Y S +     SA   
Sbjct: 660 ALGLTPNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSAV-----SALAH 714

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
           C   D+  +L  + +               +EAG   N+       L     GQG     
Sbjct: 715 CGEVDLALELLSEMK---------------EEAGIEPNEQTYAAVILACGNGGQGH---- 755

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL--FDNQVY 679
                  +  V + M    I P +  + + + A   C ++ +A+ LL E+        V 
Sbjct: 756 ------LVAQVQRDMASAGITPRLTGYLSAIRASGECGNWSEATSLLGEMEAAGVPPTVS 809

Query: 680 GVAHGLLMGYRDNIWVQALSLFDEVK----LMDSSTASAFYNA------------LTDML 723
                +    +   W +AL L DE+     + DS T SA  +A            L + +
Sbjct: 810 CYNAAITACGKSGKWQEALDLLDEMPGKGLVRDSGTLSAAISACQKAGRGVKAAGLVEEM 869

Query: 724 WHFGQKRGAQLVVLEG 739
               +++G +   LEG
Sbjct: 870 LEMAREKGGERDSLEG 885



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 133/582 (22%), Positives = 237/582 (40%), Gaps = 92/582 (15%)

Query: 202 ILGRLGKVDLAKNIFET--ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           IL  L K +LA+    T  A       + + +S  IS   +     EA+ +   M     
Sbjct: 96  ILVELDKAELAEGRATTNNAKAPAAAVSTFVYSKCISRMAKCFRWGEALDILARMAELGA 155

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            PN    NA +DACGK G   +  + +  D   +G++ D +++N  +  C  GG WE A 
Sbjct: 156 MPNSYCVNAALDACGKAG-RVQEALGLMRDARASGIELDVVSYNCAIPACVTGGDWELAL 214

Query: 320 NLFNEM-VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           ++  EM    GI  +  TY   +    +  + D A  ++ EM    +      YS + + 
Sbjct: 215 SMIREMEAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEMKDGGVPLKTSVYSAVFNA 274

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM-ESSGIRK 437
           + +      A +   E+    +  +  +YN  +      G +EEAL +   M E  G+  
Sbjct: 275 FRRVDHWQAAASTLREIHDWPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEP 334

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D VTYN ++   GK G+ ++   +F +M    + P++++++T I      GL +EA+ IF
Sbjct: 335 DVVTYNIVVAACGKAGQGEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIF 394

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVES------------------------------ 527
           RE ++AG++ +++ ++A++ A    G  E                               
Sbjct: 395 REMERAGVRPNIITHNAVMSACIAAGQWEEALDFFTEVVDGSGAANGGGGGGPPPDPVEV 454

Query: 528 ---------------------AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV-- 564
                                A+SLL +M K G++P V++YN++I A G+    +  +  
Sbjct: 455 ADACSYNTALSACEVGEQWGRALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALAL 514

Query: 565 --DDVERDLGK-----QKESANLDAMCSQDD-----KDVQEAGRTDNQIIKVFGQLVAEK 612
             +  ER L           A L      DD     +++  AG   + I   +   +   
Sbjct: 515 LREMPERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRAGVAADAI--TYSSALTGL 572

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL- 671
           A  G+ E          L + ++M    + P V+ ++A + AC      ++A +LL E+ 
Sbjct: 573 AHAGRWEQ--------ALSLLREMQGAGVSPTVICYTAAIRACGEAGKGDEALLLLREMP 624

Query: 672 ------RLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLM 707
                  LF       A G     +D  W Q L+L +E+  +
Sbjct: 625 TAGVTPNLFSYSATISACG-----KDGRWEQGLALLNEMPAL 661


>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Brachypodium distachyon]
          Length = 791

 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 234/441 (53%), Gaps = 10/441 (2%)

Query: 122 SVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAF 181
           S+ A  AL  + + A D  S  D+L         A D   +L  L +RG    A+     
Sbjct: 78  SLPARRALLSLLSDAPDRASPRDVLSALP-----AADLAAVLSALASRGRPGVALAAIHA 132

Query: 182 AVKRE-ERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           A     ER     ++    I +L R G++  A  + + A +        A++ALISA  R
Sbjct: 133 ARDLHGERVLHHPRVLPTAIRVLARAGRLADASALLDAAPDPDAS----AYTALISALSR 188

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
           +   ++A++VF  M    + P LVTYN V+    K  V +K V+ + D M ++G+  DR 
Sbjct: 189 ASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLALVDSMRKDGIPLDRY 248

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           T+N+L++ C R  L++ A  +F+EM   G + D  T N+LLD   K  + D A  ++ EM
Sbjct: 249 TYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEM 308

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
                 P+VVTY+++I  Y K G L++A  +  EM+  GI  D ++Y T++S   + G+ 
Sbjct: 309 EQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKI 368

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           + A+    EM  +G + +  TYNAL+  +G +GK+ E+  +F+++++    P+++T++TL
Sbjct: 369 DAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTL 428

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           + V+ + GL  E   +F+E K++G   +   Y +LI +  + GL + A+ +   M + GI
Sbjct: 429 LAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGI 488

Query: 541 RPNVVTYNSIIDAFGRSATTE 561
            P++ TYN+++ A  R    E
Sbjct: 489 HPDISTYNAVLSALARGGRWE 509



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 212/438 (48%), Gaps = 9/438 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L   G+   AI  +   ++   + N      +A+I + G  GK      +F+ 
Sbjct: 355 YTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTY--NALIKLHGVRGKFPEMMIVFDE 412

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + G+   V  ++ L++ +G++G   E   VF  MK+    P   TY ++I +  + G+
Sbjct: 413 IRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGL 472

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            F   +EI+  M+  G+ PD  T+N++L+  +RGG WE A  LF EM +     D  +Y+
Sbjct: 473 -FDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYS 531

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +LL A     ++D    +  ++ A+ I  +     T++   +K   L D    F E++  
Sbjct: 532 SLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRR 591

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
              LD    N ++SIY K G  ++   +   M+ S I     TYN+L+  Y + G  ++ 
Sbjct: 592 RCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKC 651

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +  ++K+    P+  +Y+T+I  Y + G  KEA ++F E K +GL  D+V Y+  + +
Sbjct: 652 ENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKS 711

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVER---DLG 572
              N + E A+ L+  M   G +PN  TYN+I+  +   GR A  +  + ++      + 
Sbjct: 712 YVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADGKSFISNLPELHPGIS 771

Query: 573 KQKESANLDAMCSQDDKD 590
           K+++   L+ +     +D
Sbjct: 772 KREQQRLLELLAKHTSRD 789



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 36/205 (17%)

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV-ESAVS 530
           P+   Y+ LI   S+   +++A+ +FR     G+   +V Y+ ++    K  +  +  ++
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTE--CTVDDVERDLGKQKESANLDAMCSQDD 588
           L+D M K+GI  +  TYN++I    R A  +    V D  R  G + +   L        
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTL-------- 285

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
                     N ++ V+G           K  R  + I    GV ++M +    P+VVT+
Sbjct: 286 ----------NSLLDVYG-----------KARRYDEAI----GVLKEMEQGGCPPSVVTY 320

Query: 649 SAILNACSRCNSFEDASMLLEELRL 673
           ++++++  +    E+A+ L EE+ +
Sbjct: 321 NSLISSYVKDGLLEEATQLKEEMEV 345


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 246/480 (51%), Gaps = 43/480 (8%)

Query: 219 ALNEGYG---NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
           +L E Y    +T   F  ++ +Y R     +A+S+ +  + +   P +++YNAV+DA  +
Sbjct: 122 SLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIR 181

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
              +      +F +ML + V P+  T+N L+      G  + A  LF++M  +G   ++ 
Sbjct: 182 SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVV 241

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYNTL+D  CK  ++D  F+++  M  K + PN+++Y+ +I+G  + GR+ +   + +EM
Sbjct: 242 TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G  LD V+YNT++  Y K G F +AL++  EM   G+    +TY +L+    K G  
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           +      +QM+   + PN  TY+TL+D +S+ G   EA ++ RE    G    VV Y+AL
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           I+  C  G +E A+++L++M ++G+ P+VV+Y++++  F RS        DV+  L  ++
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY-------DVDEALRVKR 474

Query: 576 E-------------SANLDAMCSQDDKDVQEAGRTDNQIIKV--------FGQLVAEKAG 614
           E             S+ +   C Q  +  +EA     ++++V        +  L+     
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQ--RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
           +G  E          L +  +M +  + P+VVT+S ++N  ++ +   +A  LL  L+LF
Sbjct: 533 EGDLEKA--------LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL--LKLF 582



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 194/354 (54%), Gaps = 1/354 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +D+A  +F+    +G    V  ++ LI  Y +     +   +  SM    L+PNL++Y
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N VI+   + G   K V  +  +M R G   D +T+N+L+    + G +  A  +  EM+
Sbjct: 279 NVVINGLCREG-RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G+   + TY +L+ ++CK   M+ A E + +M  + + PN  TY+T++DG+++ G ++
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A  +  EM   G     V+YN +++ +   G+ E+A+ V ++M+  G+  D V+Y+ +L
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G+ +    DE  R+  +M    + P+ +TYS+LI  + +    KEA  ++ E  + GL 
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            D   Y+ALI+A C  G +E A+ L +EM ++G+ P+VVTY+ +I+   + + T
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 189/348 (54%), Gaps = 1/348 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           +L K+D    +  +   +G    + +++ +I+   R G  +E   V   M R     + V
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TYN +I    K G +F   + +  +MLR+G+ P  IT+ SL+    + G    A    ++
Sbjct: 312 TYNTLIKGYCKEG-NFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M  RG+  +  TY TL+D   +   M+ A+ ++ EM     SP+VVTY+ +I+G+   G+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           ++DA+ +  +MK  G+  D VSY+TVLS + +    +EAL V +EM   GI+ D +TY++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G+ +Q +  E   ++E+M    + P+  TY+ LI+ Y   G  ++A+Q+  E  + G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           +  DVV YS LI+ L K      A  LL ++  E   P+ VTY+++I+
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 185/410 (45%), Gaps = 51/410 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L R G++     +       GY      ++ LI  Y + G   +A+ +   M R
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM-------------------------- 290
           + L P+++TY ++I +  K G +    +E  D M                          
Sbjct: 339 HGLTPSVITYTSLIHSMCKAG-NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397

Query: 291 -----LR----NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
                LR    NG  P  +T+N+L+      G  E A  +  +M  +G+  D+ +Y+T+L
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
              C+   +D A  +  EM  K I P+ +TYS++I G+ +  R  +A +++ EM  +G+ 
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D  +Y  +++ Y   G  E+AL +  EM   G+  D VTY+ L+ G  KQ +  E +R+
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577

Query: 462 FEQMKADCVSPNLLTYSTLIDVYS-----------KG----GLYKEAMQIFREFKQAGLK 506
             ++  +   P+ +TY TLI+  S           KG    G+  EA Q+F        K
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            D   Y+ +I   C+ G +  A +L  EM K G   + VT  +++ A  +
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHK 687



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 162/363 (44%), Gaps = 51/363 (14%)

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
           L  G   +V  +++LI +  ++G    A+   + M+   L PN  TY  ++D   + G  
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY- 395

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
                 +  +M  NG  P  +T+N+L+      G  E A  +  +M  +G+  D+ +Y+T
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           +L   C+   +D A  +  EM  K I P+ +TYS++I G+ +  R  +A +++ EM  +G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           +  D  +Y  +++ Y   G  E+AL +  EM   G+  D VTY+ L+ G  KQ +  E +
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYS-----------KG----GLYKEAMQIF------- 497
           R+  ++  +   P+ +TY TLI+  S           KG    G+  EA Q+F       
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635

Query: 498 ----------------------------REFKQAGLKADVVLYSALIDALCKNGLVESAV 529
                                       +E  ++G     V   AL+ AL K G V    
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELN 695

Query: 530 SLL 532
           S++
Sbjct: 696 SVI 698



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/398 (23%), Positives = 172/398 (43%), Gaps = 55/398 (13%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  +   G  ++A++       R    N+  +  + ++    + G ++ A  +   
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE--RTYTTLVDGFSQKGYMNEAYRVLRE 405

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + G+  +V  ++ALI+ +  +G  ++AI+V   MK   L P++V+Y+ V+    +   
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS-Y 464

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           D    + +  +M+  G++PD IT++SL+   C +    EA  +L+ EM+  G+  D FTY
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC-DLYEEMLRVGLPPDEFTY 523

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA----LNMFS 393
             L++A C    ++ A ++  EM  K + P+VVTYS +I+G  K  R  +A    L +F 
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583

Query: 394 E--------------------------------MKFLGIGLDRV--------------SY 407
           E                                MK +    D+V              +Y
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N ++  + + G   +A  + KEM  SG     VT  AL+    K+GK +E+  +   +  
Sbjct: 644 NIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLR 703

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
            C          L+++  + G     + +  E  + G 
Sbjct: 704 SCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741


>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 793

 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 194/332 (58%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           A++AL+SA+ R+   ++A++VF  M    ++P +VTYN V+    K  V +K VV + D 
Sbjct: 180 AYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALVDS 239

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M  +G+  DR T+N+L++ C RG L++ A  +F+EM   G + D  T+N+LLD   K   
Sbjct: 240 MKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARM 299

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            D A  ++ EM      P+VVTY+++I  Y K G L +A  +  EM+  GI  D ++Y T
Sbjct: 300 HDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTT 359

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++S   + G+ + A+    EM  +G + +  TYNAL+  +G +GK+ E+  +F+ +++  
Sbjct: 360 LISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAG 419

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P+++T++TL+ V+ + GL  E   +F+E K++G   +   Y +LI +  + GL + ++
Sbjct: 420 FVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSM 479

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +   M + GI P++ TYN+++ A  R    E
Sbjct: 480 EIYKRMIEAGIYPDISTYNAVLSALARGGRWE 511



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 249/496 (50%), Gaps = 36/496 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC-QEAISVFNSMK 255
           +A++S   R  +   A  +F   +  G    +  ++ ++  Y +     ++ +++ +SMK
Sbjct: 182 TALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALVDSMK 241

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              +  +  TYN +I  C +G + +K   ++FD+M   G +PD++TFNSLL V  +  + 
Sbjct: 242 NDGIPLDRYTYNTLISCCRRGAL-YKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMH 300

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  +  EM   G    + TYN+L+ +  K   +  A E+  EM  K I P+V+TY+T+
Sbjct: 301 DEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTL 360

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G  +AG++D A+  + EM   G   +  +YN ++ ++   G+F E + V  ++ S+G 
Sbjct: 361 ISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGF 420

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VT+N LL  +G+ G   EV  +F++MK     P   TY +LI  YS+ GL+ ++M+
Sbjct: 421 VPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSME 480

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I++   +AG+  D+  Y+A++ AL + G  E A  L  EM     RP+ ++Y+S++ A+ 
Sbjct: 481 IYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYA 540

Query: 556 --------RSATTECTVDDVERDLGKQKESANLDAMC---SQDDKDVQEAGRTD------ 598
                   ++ + +   + +E   G  K    +++     S+ +K   E GR        
Sbjct: 541 NAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDIN 600

Query: 599 --NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
             N ++ V+G+            NR  +++  IL +   M    I  +  T++++++  S
Sbjct: 601 VLNAMVSVYGK------------NRMVKKVEEILSL---MKGSSINLSTATYNSLMHMYS 645

Query: 657 RCNSFEDASMLLEELR 672
           R    E    +L E++
Sbjct: 646 RLGDCEKCENILTEIK 661



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 185/394 (46%), Gaps = 34/394 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS L R GK+D A   ++  L  G    +  ++ALI  +G  G   E ++VF+ ++ 
Sbjct: 358 TTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRS 417

Query: 257 YNLKPNLVTYNAVIDACGKGGVD----------------------------------FKH 282
               P++VT+N ++   G+ G+D                                  F  
Sbjct: 418 AGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQ 477

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            +EI+  M+  G+ PD  T+N++L+  +RGG WE A  LF EM +     D  +Y++LL 
Sbjct: 478 SMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLH 537

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A     ++D    +  ++ A+ I  +     T++   +K   L +    F E+      L
Sbjct: 538 AYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSL 597

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D    N ++S+Y K    ++   +   M+ S I     TYN+L+  Y + G  ++   + 
Sbjct: 598 DINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENIL 657

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            ++K+    P+  +Y+T+I  Y + G  KEA ++F E K +GL  D+V Y+  + +   N
Sbjct: 658 TEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVAN 717

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            + E A+ L+  M   G +PN  TYNSI+  + R
Sbjct: 718 SMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCR 751



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/256 (21%), Positives = 109/256 (42%), Gaps = 38/256 (14%)

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV-ESAVS 530
           P+   Y+ L+  +S+   +++A+ +FR     G++  +V Y+ ++    K  +  +  V+
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA 235

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTE--CTVDDVERDLGKQKESANLDAMCSQDD 588
           L+D M  +GI  +  TYN++I    R A  +    V D  R  G + +            
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKV---------- 285

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
                   T N ++ V+G+             R   E +   GV ++M      P+VVT+
Sbjct: 286 --------TFNSLLDVYGK------------ARMHDEAI---GVLKEMELGGCPPSVVTY 322

Query: 649 SAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWV--QALSLFDEVKL 706
           ++++++  +    ++A+ L EE+ +   Q   + +  L+   D       A+  +DE+  
Sbjct: 323 NSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLR 382

Query: 707 MDSSTASAFYNALTDM 722
                    YNAL  +
Sbjct: 383 NGCKPNLCTYNALIKL 398


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 119/360 (33%), Positives = 192/360 (53%), Gaps = 7/360 (1%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN------LKP 261
           ++  A  +    +  GY   V  +  L++    +G    A+ +   M   N      +KP
Sbjct: 177 RISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKP 236

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           NLV Y  +ID+  K G+  K   E+F +M   G+ PD + ++S++      G WE A+ L
Sbjct: 237 NLVCYCTIIDSLCKDGLIDKGK-ELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGL 295

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           FNEMV  G+  ++ T+N L+DA+CK  +M+ A  ++  M  +  SP+  TY+T+IDG+  
Sbjct: 296 FNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCL 355

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            GR+DDA ++F  M+  GI  D VSYN +++ Y K GR  EA  + +EM    I    +T
Sbjct: 356 EGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVIT 415

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN LL G  ++GK  +   +F +MK   ++P   TY+ L+D   K     EAM++F   +
Sbjct: 416 YNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLE 475

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
               +  + +++ LID LCK   +E A  L + ++ EG+ PNV+TY  +I    +S   E
Sbjct: 476 NHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLE 535



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 244/530 (46%), Gaps = 57/530 (10%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           + +F+ L+ A  +     + IS++  M    L P+ +T N +I+  C    VDF   + +
Sbjct: 92  ISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFG--LAV 149

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             +MLR G  P+ +TF SL+     G     A  L  +MV  G   ++ TY TLL+ +C 
Sbjct: 150 LGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCM 209

Query: 347 GAQMDLAFEIMAEMPAKN------ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
                LA ++  EM   N      I PN+V Y T+ID   K G +D    +F EMK  GI
Sbjct: 210 TGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGI 269

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D V+Y++++      GR+E A  +  EM   G+  + VT+N L+    K GK +E   
Sbjct: 270 SPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANH 329

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + + M     SP+  TY+TLID +   G   +A  +F   +  G++ D V Y+ LI+  C
Sbjct: 330 LLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYC 389

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK----- 575
           K+G +  A  L  EM  + I P V+TYN+++    R    E  V D     G+ K     
Sbjct: 390 KSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFR----EGKVRDAWNLFGEMKVHDLT 445

Query: 576 -ESAN----LDAMCSQ-------------DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
            ES      LD +C               ++ D Q +       I++F  L+ +   + +
Sbjct: 446 PESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPS-------IQIFNCLI-DGLCKAR 497

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML---LEELRLF 674
           K    R+       +F ++    ++PNV+T++ +++   +    E+A  L   +EE    
Sbjct: 498 KIEIARE-------LFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCA 550

Query: 675 DNQVYGVAHGLLMGYRDNIWVQ-ALSLFDEVKLMDSSTASAFYNALTDML 723
            N V    + L+ G+  N  +Q  + L  E+   D S  ++  + + D+L
Sbjct: 551 PNLV--TFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLL 598



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 196/381 (51%), Gaps = 14/381 (3%)

Query: 207 GKVDLAKNIFETALNE--GYGNTV----YAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           G   LA  + E  LN   G+G T+      +  +I +  + G   +   +F  MK   + 
Sbjct: 211 GNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGIS 270

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           P++V Y+++I      G  ++    +F++M+  GV P+ +TFN L+    + G  E A +
Sbjct: 271 PDVVAYSSIIHGMCHTG-RWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANH 329

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L   M+ RG   D FTYNTL+D  C   ++D A ++   M +K I  + V+Y+ +I+GY 
Sbjct: 330 LLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYC 389

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K+GR+ +A  ++ EM    I    ++YNT+L+   + G+  +A  +  EM+   +  ++ 
Sbjct: 390 KSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESC 449

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TYN LL G  K     E   +F  ++     P++  ++ LID   K    + A ++F   
Sbjct: 450 TYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRL 509

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
              GL+ +V+ Y+ +I  LCK+G +E+A  L   M ++G  PN+VT+N+++  F      
Sbjct: 510 SHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGF------ 563

Query: 561 ECTVDDVERDLGKQKESANLD 581
            C  D++++ +   +E A  D
Sbjct: 564 -CQNDEMQKVVELLQEMAEKD 583



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 182/359 (50%), Gaps = 1/359 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            +I  L + G +D  K +F      G    V A+S++I     +G  + A  +FN M   
Sbjct: 243 TIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDE 302

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            + PN+VT+N +IDA  K G   +    +   M++ G  PD  T+N+L+      G  + 
Sbjct: 303 GVHPNVVTFNVLIDALCKAG-KMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDD 361

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           AR+LF  M  +GI+ D  +YN L++  CK  +M  A ++  EM  K I P V+TY+T++ 
Sbjct: 362 ARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLT 421

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  + G++ DA N+F EMK   +  +  +YN +L    K     EA+ +   +E+   + 
Sbjct: 422 GLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQP 481

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
               +N L+ G  K  K +  R +F ++  + + PN++TY+ +I    K G  + A  +F
Sbjct: 482 SIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLF 541

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
              ++ G   ++V ++ L+   C+N  ++  V LL EM ++   P+  T + ++D   +
Sbjct: 542 LGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSK 600



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 211/459 (45%), Gaps = 39/459 (8%)

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C  G +       +F+ ++     P   +FN+LL   ++   +    +L+  M   G+  
Sbjct: 66  CKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAP 125

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D  T N L++  C   ++D    ++ EM  +  SPN VT+++++ G     R+ +A  + 
Sbjct: 126 DFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLL 185

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG------IRKDAVTYNALL 446
            +M  +G   + V+Y T+L+     G    A+ + +EM +        I+ + V Y  ++
Sbjct: 186 RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTII 245

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
               K G  D+ + +F +MK   +SP+++ YS++I      G ++ A  +F E    G+ 
Sbjct: 246 DSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVH 305

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            +VV ++ LIDALCK G +E A  LL  M + G  P+  TYN++ID F      E  +DD
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGF----CLEGRIDD 361

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
             RDL             S + K ++    + N +I  +      K+G+  +  +  +E+
Sbjct: 362 A-RDL-----------FVSMESKGIETDAVSYNVLINGYC-----KSGRMVEAKKLYREM 404

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
           +C           +I P V+T++ +L    R     DA  L  E+++ D       + +L
Sbjct: 405 MC----------KEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNIL 454

Query: 687 MG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
           +    ++N   +A+ LF  ++  D   +   +N L D L
Sbjct: 455 LDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGL 493



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 166/346 (47%), Gaps = 3/346 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ ++  + + G W  A   F   V  +E  +      + +I  L + GK++ A ++ + 
Sbjct: 276 YSSIIHGMCHTGRWEGAKGLFNEMV--DEGVHPNVVTFNVLIDALCKAGKMEEANHLLKL 333

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +  G     + ++ LI  +   G   +A  +F SM+   ++ + V+YN +I+   K G 
Sbjct: 334 MIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSG- 392

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                 +++ +M+   + P  IT+N+LL    R G    A NLF EM    +  +  TYN
Sbjct: 393 RMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYN 452

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            LLD +CK   +  A E+   +   +  P++  ++ +IDG  KA +++ A  +F+ +   
Sbjct: 453 ILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHE 512

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  + ++Y  ++    K G+ E A  +   ME  G   + VT+N L+ G+ +  +  +V
Sbjct: 513 GLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKV 572

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
             + ++M     SP+  T S ++D+ SK   Y+E + +   F   G
Sbjct: 573 VELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/382 (31%), Positives = 203/382 (53%), Gaps = 36/382 (9%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+  F++ L++G    VY ++ LI A    G+ +EA+S+   M+     PN+VTYN ++ 
Sbjct: 134 ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVA 193

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           A  + G +      +   ML  G++P+ +TFNS++    + G  E AR +F+EM+  G+ 
Sbjct: 194 AFFRAG-EVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLA 252

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  +YNTL+   CK      A  + AEM  K I P+VVT++++I    KAG L+ A+ +
Sbjct: 253 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTL 312

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
             +M+  G+ ++ V++  ++  + K G  ++ALL  + M    I+   V YNAL+ GY  
Sbjct: 313 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCM 372

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG----------------GLYKEAMQ 495
            G+ DE R +  +M+A  + P+++TYST+I  Y K                 G+  +A+ 
Sbjct: 373 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAIT 432

Query: 496 -------------------IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
                              +F+   + GL+ D   Y++LID  CK G VE A+SL D+M 
Sbjct: 433 YSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMV 492

Query: 537 KEGIRPNVVTYNSIIDAFGRSA 558
           K G+ P+VVTY+ +I+   +SA
Sbjct: 493 KAGVLPDVVTYSVLINGLSKSA 514



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 235/450 (52%), Gaps = 35/450 (7%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           GY  +V A++A++ A   +     A   F+SM    + PN+ TYN +I A CG+G    K
Sbjct: 111 GYVPSVLAYNAVLLALSDASL-TSARRFFDSMLSDGVAPNVYTYNILIRALCGRG--HRK 167

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             + I  DM   G  P+ +T+N+L+A   R G  + A  L   M+  G+  ++ T+N+++
Sbjct: 168 EALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMV 227

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           + +CK  +M+ A ++  EM  + ++P+ V+Y+T++ GY KAG   +AL++F+EM   GI 
Sbjct: 228 NGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 287

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D V++ +++ +  K G  E A+ + ++M   G++ + VT+ AL+ G+ K+G  D+    
Sbjct: 288 PDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 347

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
              M+   + P+++ Y+ LI+ Y   G   EA ++  E +  GLK DVV YS +I A CK
Sbjct: 348 VRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCK 407

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
           N    SA  L  +M ++G+ P+ +TY+S+I                 R L ++K  ++  
Sbjct: 408 NCDTHSAFELNQQMLEKGVLPDAITYSSLI-----------------RVLCEEKRLSDAH 450

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
            +     K++ + G   ++    +  L+     +G  E          L +  KM K  +
Sbjct: 451 VLF----KNMIKLGLQPDEF--TYTSLIDGHCKEGNVER--------ALSLHDKMVKAGV 496

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            P+VVT+S ++N  S+     +A  LL +L
Sbjct: 497 LPDVVTYSVLINGLSKSARAMEAQQLLFKL 526



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 205/396 (51%), Gaps = 9/396 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK---LASAMISILGRLGKVDLAKNI 215
           Y  L+R L  RG   +A+     ++ R+ R    G      + +++   R G+VD A+ +
Sbjct: 153 YNILIRALCGRGHRKEAL-----SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERL 207

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
               L+ G    +  F+++++   ++G  ++A  VF+ M R  L P+ V+YN ++    K
Sbjct: 208 VGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCK 267

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            G   +  + +F +M + G+ PD +TF SL+ V  + G  E A  L  +M  RG+  +  
Sbjct: 268 AGCSHE-ALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEV 326

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           T+  L+D  CK   +D A   +  M    I P+VV Y+ +I+GY   GR+D+A  +  EM
Sbjct: 327 TFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 386

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           +  G+  D V+Y+T++S Y K      A  + ++M   G+  DA+TY++L+    ++ + 
Sbjct: 387 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRL 446

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            +   +F+ M    + P+  TY++LID + K G  + A+ +  +  +AG+  DVV YS L
Sbjct: 447 SDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVL 506

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           I+ L K+     A  LL ++  E   P    Y++++
Sbjct: 507 INGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALM 542



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 189/405 (46%), Gaps = 51/405 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++M++ + + GK++ A+ +F+  + EG      +++ L+  Y ++G   EA+SVF  M +
Sbjct: 224 NSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ 283

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG--- 312
             + P++VT+ ++I    K G + +  V +   M   G+Q + +TF +L+   C +G   
Sbjct: 284 KGIMPDVVTFTSLIHVMCKAG-NLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD 342

Query: 313 -------------------------------GLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
                                          G  + AR L +EM  +G+  D+ TY+T++
Sbjct: 343 DALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTII 402

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
            A CK      AFE+  +M  K + P+ +TYS++I    +  RL DA  +F  M  LG+ 
Sbjct: 403 SAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQ 462

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D  +Y +++  + K G  E AL +  +M  +G+  D VTY+ L+ G  K  +  E +++
Sbjct: 463 PDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 522

Query: 462 F------EQMKAD---------CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
                  E + A+         C    L +   L+  +   GL  EA ++++        
Sbjct: 523 LFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWN 582

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            D  +YS LI   C+ G V  A+S   +M + G  PN  +  S+I
Sbjct: 583 LDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLI 627



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 162/333 (48%), Gaps = 33/333 (9%)

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P+V+ Y+ ++   + A  L  A   F  M   G+  +  +YN ++      G  +EAL +
Sbjct: 114 PSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            ++M  +G   + VTYN L+  + + G+ D   R+   M    + PNL+T++++++   K
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G  ++A ++F E  + GL  D V Y+ L+   CK G    A+S+  EMT++GI P+VVT
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292

Query: 547 YNSIIDAFGRSATTECTVDDVE--RDLGKQKE----SANLDAMCSQDDKDVQEAGRTDNQ 600
           + S+I    ++   E  V  V   R+ G Q      +A +D  C +        G  D+ 
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKK--------GFLDDA 344

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEIL---CILG-------VFQKMHKLKIKPNVVTFSA 650
           ++ V G     +  + K    C   ++   C++G       +  +M    +KP+VVT+S 
Sbjct: 345 LLAVRGM----RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 400

Query: 651 ILNA-CSRCNS---FEDASMLLEELRLFDNQVY 679
           I++A C  C++   FE    +LE+  L D   Y
Sbjct: 401 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITY 433



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 153/332 (46%), Gaps = 16/332 (4%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           +V  ++ALI+ Y   G   EA  + + M+   LKP++VTY+ +I A  K   D     E+
Sbjct: 359 SVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKN-CDTHSAFEL 417

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              ML  GV PD IT++SL+ V         A  LF  M+  G+  D FTY +L+D  CK
Sbjct: 418 NQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCK 477

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF------------SE 394
              ++ A  +  +M    + P+VVTYS +I+G +K+ R  +A  +             ++
Sbjct: 478 EGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTK 537

Query: 395 MKFLGIGLDRVSYNTVLSI---YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
              L     +    +VL++   +   G   EA  V + M       D   Y+ L+ G+ +
Sbjct: 538 YDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCR 597

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G   +     +QM     +PN  +  +LI    + G+  EA Q+ ++       AD   
Sbjct: 598 AGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEA 657

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             ALID     G V++ + +L  M K+G+ P+
Sbjct: 658 SKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689



 Score = 39.7 bits (91), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 37/189 (19%), Positives = 76/189 (40%), Gaps = 21/189 (11%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G V+ A ++ +  +  G    V  +S LI+   +S    EA  +   +      P    Y
Sbjct: 479 GNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKY 538

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           +A++  C K   + K V+ +                  L   C +G + EA + ++  M+
Sbjct: 539 DALMHCCRKA--ELKSVLAL------------------LKGFCMKGLMNEADK-VYQSML 577

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            R  + D   Y+ L+   C+   +  A     +M  +  +PN  +  ++I G  + G + 
Sbjct: 578 DRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVV 637

Query: 387 DALNMFSEM 395
           +A  +  ++
Sbjct: 638 EADQVIQQL 646


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 178/671 (26%), Positives = 304/671 (45%), Gaps = 80/671 (11%)

Query: 33  QSHHPSSRPHWTSHKVSLTKPPLSPSPRNAPKPAATS-----------------TTVAPN 75
           QS + SS+PH +S        PLS S    P P   S                 + + P 
Sbjct: 24  QSSNFSSQPHPSS--------PLSISSNTDPFPELVSKISIILSSPTWERSSELSHLIPK 75

Query: 76  PKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAF 135
            KP H ++ L +  +      S  R   +VS+ HF +                 H ++ F
Sbjct: 76  LKPHHVVNLLDTHNNTE----SVLRFFHWVSRTHFFK-----------------HDMSCF 114

Query: 136 ARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL 195
               VS+ + L +    +   +    +++   N GE  + IQ     +       D G  
Sbjct: 115 ----VSMLNRLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQ----VLSEINTTYDFGYT 166

Query: 196 ASAMISILGRLGKVD---LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
             +  ++L +LGK D   L ++++   LN G    ++ F+A+I      G  QEA  +  
Sbjct: 167 LYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMG 226

Query: 253 SMKRYNLKPNLVTYNA-VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCS 310
            +  Y   P+  TY + +I  C  G +D     E+FD M+++G  P+ +T+++L+  +CS
Sbjct: 227 HIFHYGACPDTFTYTSLIIGHCKNGNLDL--AFEMFDRMVKDGCDPNSVTYSALINGLCS 284

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
            G L E A ++  EM+ +GI+  +  Y   + ++C   +   A +++ +M  +   PNV 
Sbjct: 285 EGRL-EEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQ 343

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TY+ +I G ++ G+ + A+ ++ +M   G+    V+Y+ +++     GRFE AL + + M
Sbjct: 344 TYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWM 403

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
            S     +  TYN ++ G+   G   +   +F+QM     SPN++TY+ +I +Y K G  
Sbjct: 404 LSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYM 463

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             AM++    K  GLK D   Y+ LI    + G +E A SL +EM + GI PNVVTYN+I
Sbjct: 464 NNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAI 523

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
           I+ +     T   VDD      K  ES N+    S    ++  +G +    I        
Sbjct: 524 INGY----LTVAKVDDALALFWKMVESGNVP---SSGTYNMMISGFSKTNRISEAENFCG 576

Query: 611 EKAGQGKKENRCRQ----EILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCN 659
           +   QG   N        + LC  G       +F +M K    PN+ T+S++++   +  
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEG 636

Query: 660 SFEDASMLLEE 670
             EDA  LL++
Sbjct: 637 QAEDAERLLDD 647



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 203/431 (47%), Gaps = 36/431 (8%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT  +  L + G   +A++      KR    N Q    +A+IS L R GK ++A  ++  
Sbjct: 310 YTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQT--YTALISGLSRDGKFEVAIGVYHK 367

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            L +G   T   +SALI+     G  + A+++F  M  ++  PN  TYN +I   C  G 
Sbjct: 368 MLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGY 427

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +  +    IFD ML+ G  P+ IT+N ++ +  + G    A  L   M   G+  D +TY
Sbjct: 428 I--QKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTY 485

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             L+    +G +++ AF +  EM    ISPNVVTY+ +I+GY    ++DDAL +F +M  
Sbjct: 486 ANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVE 545

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G      +YN ++S ++K  R  EA   C +M   G+  + +TY + + G  K G+   
Sbjct: 546 SGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSL 605

Query: 458 VRRMFEQMKA-------------------------------DCVSPNLLTYSTLIDVYSK 486
             ++F +MK                                D   PN+ TY+TL+     
Sbjct: 606 AFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCG 665

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G   EA Q+    K+ GL+    +Y AL+   CKN  VESA+ + D M   G +P +  
Sbjct: 666 KGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSD 725

Query: 547 YNSIIDAFGRS 557
           Y ++I A  ++
Sbjct: 726 YKALICALCKA 736



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 185/394 (46%), Gaps = 14/394 (3%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I I  + G ++ A  + E     G     + ++ LIS + R G  + A S+FN M  + 
Sbjct: 453 IIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHG 512

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           + PN+VTYNA+I+       VD    + +F  M+ +G  P   T+N +++  S+      
Sbjct: 513 ISPNVVTYNAIINGYLTVAKVD--DALALFWKMVESGNVPSSGTYNMMISGFSKTNRISE 570

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A N   +MV +G+  ++ TY + +D +CK  +  LAF+I  EM  ++  PN+ TYS++ID
Sbjct: 571 AENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLID 630

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  + G+ +DA  +  +    G   +  +Y T++      GR  EA  + + M+  G++ 
Sbjct: 631 GLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQP 686

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
               Y ALL G  K  + +   ++F+ M      P L  Y  LI    K    ++A  +F
Sbjct: 687 SEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMF 746

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI---IDAF 554
           +   +    +D V+++ L+D L K G  + ++ LL  M       N  T   +   + A 
Sbjct: 747 QTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSAL 806

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           G S      +  + + LG  KE     A   +DD
Sbjct: 807 GCSI----EIPQISKQLGIVKEKQKQTADVLRDD 836



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 169/389 (43%), Gaps = 54/389 (13%)

Query: 375 MIDGYAKAGRLDDALNMFSEMKF-LGIGLDRVSYNTVLSIYAKLGRFEEALL---VCKEM 430
           MI      G +   + + SE+      G    S++T+L    +LG+F+   L   V  EM
Sbjct: 137 MIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLL---IQLGKFDMDGLGRDVYIEM 193

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
            +SGIR +  T+NA++     +GK  E   +   +      P+  TY++LI  + K G  
Sbjct: 194 LNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNL 253

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN-- 548
             A ++F    + G   + V YSALI+ LC  G +E A+ +L+EM  +GI P V  Y   
Sbjct: 254 DLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIP 313

Query: 549 --SIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG 606
             S+ DA GRS        +  + LGK K+       C  +              ++ + 
Sbjct: 314 IVSLCDA-GRSC-------EAVKLLGKMKKRG-----CGPN--------------VQTYT 346

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            L++  +  GK E          +GV+ KM    + P  VT+SA++N       FE A  
Sbjct: 347 ALISGLSRDGKFE--------VAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALT 398

Query: 667 LLEEL----RLFDNQVYGVAHGLLMGYRDNIWVQ-ALSLFDEVKLMDSSTASAFYNALTD 721
           + E +     L + + Y V   ++ G+    ++Q A ++FD++     S     YN +  
Sbjct: 399 IFEWMLSHDSLPNTETYNV---IIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIH 455

Query: 722 MLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
           + +  G    A  ++   K   +  + W+
Sbjct: 456 IYFKQGYMNNAMRLLEMMKGNGLKLDTWT 484


>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 404

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/388 (33%), Positives = 218/388 (56%), Gaps = 16/388 (4%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           D T +L EL  + +W   ++ F+++ K++       +L + +I  LGR G+V  A  +F+
Sbjct: 12  DITCVLTELQRQHDWRCTLEVFSWS-KKQSWYCPNSRLYTRLIGFLGREGRVHNATLLFQ 70

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN---LKPNLVTYNAVIDACG 274
             L E      Y ++AL++AYG++   +EA++VF+ MK  N    +PN VT NA+IDA  
Sbjct: 71  EMLLEKCQADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALV 130

Query: 275 KGGVDFKHVVEIFDDM------LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           KGG+ +   +++F DM      L +G +P+ IT+N L+    + GL +    +   M   
Sbjct: 131 KGGL-YDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDG 189

Query: 329 GIDQDI----FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
             DQ +     TYNTL++A  KG   + A E++  M    + P+ +TY+ +ID Y KAG 
Sbjct: 190 NTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGL 249

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
            ++A N F  MK   + +D ++Y  ++  Y + G +++A  + K M+ SG+R + VTY +
Sbjct: 250 WENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLS 309

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+  YGK G  +E R +F  M+      N+L YS+LID Y K G Y EA ++    ++AG
Sbjct: 310 LMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRRAG 369

Query: 505 LKADVVLYSALIDALCK-NGLVESAVSL 531
            + +++ YSA++ + CK N  VE+ V L
Sbjct: 370 CQPNLITYSAILSSCCKSNCWVEAQVLL 397



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 184/340 (54%), Gaps = 14/340 (4%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           ++ LI   GR G    A  +F  M     + +  TY A+++A GK  + F+  + +F  M
Sbjct: 49  YTRLIGFLGREGRVHNATLLFQEMLLEKCQADQYTYTALVNAYGKAKM-FEEALAVFSHM 107

Query: 291 LRNG---VQPDRITFNSLLAVCSRGGLWEAARNLFNEM------VHRGIDQDIFTYNTLL 341
             +     QP+ +T N+L+    +GGL++ A  +F +M      +  G + ++ TYN L+
Sbjct: 108 KESNEPNCQPNTVTCNALIDALVKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLI 167

Query: 342 DAICKGAQMDLAFEIMAEMPAKN----ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           DA+CK   +D+  +++  M   N    + PN  TY+T+I+   K G  + A  +   M  
Sbjct: 168 DALCKEGLLDIGMKVLQYMRDGNTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVE 227

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  D ++Y  ++  Y K G +E A    K M+ + +  D + Y A++  YG++G Y +
Sbjct: 228 HGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQK 287

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              MF+ M+   + PN +TY +L++ Y K GL +E+  +F   +++G + +V++YS+LID
Sbjct: 288 AEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLID 347

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           A  K G    A  +LD M + G +PN++TY++I+ +  +S
Sbjct: 348 AYGKAGNYLEAARMLDMMRRAGCQPNLITYSAILSSCCKS 387



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 192/410 (46%), Gaps = 45/410 (10%)

Query: 279 DFKHVVEIFD-DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           D++  +E+F     ++   P+   +  L+    R G    A  LF EM+      D +TY
Sbjct: 25  DWRCTLEVFSWSKKQSWYCPNSRLYTRLIGFLGREGRVHNATLLFQEMLLEKCQADQYTY 84

Query: 338 NTLLDAICKGAQMDLA---FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
             L++A  K    + A   F  M E    N  PN VT + +ID   K G  D A+ +F +
Sbjct: 85  TALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVKGGLYDQAIQVFFD 144

Query: 395 MKFLGIGLDR------VSYNTVLSIYAKLGRFEEALLVCKEMES----SGIRKDAVTYNA 444
           M+    GL+       ++YN ++    K G  +  + V + M        ++ ++ TYN 
Sbjct: 145 MRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQSVQPNSATYNT 204

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+   GK G Y++   + + M    V P+ +TY+ LID Y K GL++ A   F+  K   
Sbjct: 205 LINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTN 264

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           +  DV+ Y+A+IDA  + GL + A  +   M   G+RPN VTY S+++A+G++   E   
Sbjct: 265 VSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGLPE--- 321

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                      ES N+  +       ++E+G   N +I  +  L+      G      R 
Sbjct: 322 -----------ESRNVFNI-------MRESGYEGNVLI--YSSLIDAYGKAGNYLEAAR- 360

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
                  +   M +   +PN++T+SAIL++C + N + +A +LL  L++F
Sbjct: 361 -------MLDMMRRAGCQPNLITYSAILSSCCKSNCWVEAQVLLRRLQVF 403


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 200/365 (54%), Gaps = 1/365 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI  L + G ++ ++ +F      G    V  +++LI  YG+ G  +E  S+FN MK 
Sbjct: 234 NVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD 293

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+++TYN +I+ C           E F +M  NG++P+ +T+++L+    + G+ +
Sbjct: 294 VGCVPDIITYNGLIN-CYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQ 352

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L  +M   G+  + FTY +L+DA CK   +  A++++ +M    +  N+VTY+ ++
Sbjct: 353 GAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALL 412

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  KAGR+ +A  +F  M   GI  ++  Y  ++  Y K  R E+A+ + K+M    I+
Sbjct: 413 DGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIK 472

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D + Y +++ G+  Q K +E + + E+MK+  +S N +  +T+ID Y K G   +A+  
Sbjct: 473 PDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNF 532

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F+E +  G++A +V Y  LID LC+ G+VE AV     M   G++PNV  Y S+ID    
Sbjct: 533 FQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCX 592

Query: 557 SATTE 561
           +   E
Sbjct: 593 NNCIE 597



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 225/476 (47%), Gaps = 34/476 (7%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            + S+   LG ++ A   F    N        + + L+    +SG  Q     FN M   
Sbjct: 165 VLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGA 224

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            + P++ TYN +ID   K G D ++   +F  M   G+ PD +T+NSL+    + G  E 
Sbjct: 225 GIAPSVFTYNVMIDYLCKEG-DLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEE 283

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
             +LFNEM   G   DI TYN L++  CK  +M  AFE  +EM    + PNVVTYST+ID
Sbjct: 284 VASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLID 343

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            + K G +  A+ +  +M+  G+  +  +Y +++    K G   EA  +  +M  +G++ 
Sbjct: 344 AFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKL 403

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + VTY ALL G  K G+  E   +F  M  D +SPN   Y+ L+  Y K    ++AM+I 
Sbjct: 404 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 463

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           ++  +  +K D++LY ++I   C    +E    +L+EM   GI  N V   +IIDA+ ++
Sbjct: 464 KQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKA 523

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
                         GK  ++ N      Q+ +DV          + + G           
Sbjct: 524 --------------GKSSDALNF----FQEMQDVGVEATIVTYCVLIDG----------- 554

Query: 618 KENRCRQEILCI-LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
               C   I+ + +  F +M  L ++PNV  ++++++     N  E A  L +E++
Sbjct: 555 ---LCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQ 607



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 215/456 (47%), Gaps = 46/456 (10%)

Query: 143 GDILKKFEFKLCGAD------DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA 196
           G +++KF   + GA        Y  ++  L   G+   + +   F   RE   +      
Sbjct: 211 GQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRR--LFVQMREMGLSPDVVTY 268

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I   G++G ++   ++F    + G    +  ++ LI+ Y +      A   F+ MK 
Sbjct: 269 NSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKN 328

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             LKPN+VTY+ +IDA  K G+  +  +++  DM R G+ P+  T+ SL+ A C  G L 
Sbjct: 329 NGLKPNVVTYSTLIDAFCKEGM-MQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLT 387

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA + L N+M+  G+  +I TY  LLD +CK  +M  A E+   M    ISPN   Y+ +
Sbjct: 388 EAWK-LLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTAL 446

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + GY KA R++DA+ +  +M    I  D + Y +++  +    + EE  L+ +EM+S GI
Sbjct: 447 VHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGI 506

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMK---------ADCV---------------- 470
             + V    ++  Y K GK  +    F++M+           CV                
Sbjct: 507 SANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVD 566

Query: 471 ----------SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
                      PN+  Y++LID        + A ++F E +  G+  D+  ++ALID   
Sbjct: 567 YFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNL 626

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           K+G ++ A+ L+  MT+  I  ++  Y S++  F +
Sbjct: 627 KHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQ 662



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/430 (23%), Positives = 199/430 (46%), Gaps = 37/430 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+   +  K+  A   F    N G    V  +S LI A+ + G  Q AI +   M+R
Sbjct: 304 NGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRR 363

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L PN  TY ++IDA  K G +     ++ +DML+ GV+ + +T+ +LL    + G   
Sbjct: 364 TGLLPNEFTYTSLIDANCKAG-NLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI 422

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY---- 372
            A  +F  M+  GI  +   Y  L+    K  +M+ A +I+ +M   NI P+++ Y    
Sbjct: 423 EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSII 482

Query: 373 -------------------------------STMIDGYAKAGRLDDALNMFSEMKFLGIG 401
                                          +T+ID Y KAG+  DALN F EM+ +G+ 
Sbjct: 483 WGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVE 542

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
              V+Y  ++    + G  E A+     M S G++ +   Y +L+ G       +  +++
Sbjct: 543 ATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKL 602

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F++M+   ++P++  ++ LID   K G  +EA+ +     +  ++ D+ +Y++L+    +
Sbjct: 603 FDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQ 662

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
            G +  A    +EM ++GI P  V    ++  + +    +  + +++ ++ +   S   D
Sbjct: 663 CGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI-ELKNEMERMAYSFEFD 721

Query: 582 AMCSQDDKDV 591
           A  + +++ V
Sbjct: 722 AQLAYNEQGV 731



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 172/355 (48%), Gaps = 32/355 (9%)

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            ++ L     +   ++ A E  + M      P   + + ++   +K+G        F++M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              GI     +YN ++    K G  E +  +  +M   G+  D VTYN+L+ GYGK G  
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           +EV  +F +MK     P+++TY+ LI+ Y K      A + F E K  GLK +VV YS L
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT-TEC--TVDDVER--- 569
           IDA CK G+++ A+ LL +M + G+ PN  TY S+IDA  ++   TE    ++D+ +   
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 401

Query: 570 DLGKQKESANLDAMC--------SQDDKDVQEAGRTDNQIIK---VFGQLVAEKAGQGKK 618
            L     +A LD +C         +  + + + G + NQ +    V G + AE+     K
Sbjct: 402 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 461

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL-NACSRCNSFEDASMLLEELR 672
                        + ++M +  IKP+++ + +I+   CS+    E+  ++LEE++
Sbjct: 462 -------------ILKQMTECNIKPDLILYGSIIWGHCSQ-RKLEETKLILEEMK 502


>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Glycine max]
          Length = 1476

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 158/583 (27%), Positives = 292/583 (50%), Gaps = 31/583 (5%)

Query: 3   STPP--HCSITATKPYQNHQYPHNHLKNN-------HHRQSHHPSSRPHWTSHKVSLTKP 53
           S PP  H ++ +T P  +     +   N        + R S  PS R  W   K+S T P
Sbjct: 27  SNPPPKHAALPSTSPEPDTDTNSSSEPNTVKPVKFIYTRAS--PSIR--WPHLKLSQTYP 82

Query: 54  PLSPS-PRNAPKPAATSTTVAPNP---KPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMH 109
              P  P+N   P+ T  + +P     KP  +      ++  L     GRRS   V KM+
Sbjct: 83  STQPHFPQNDIFPSKTPPSESPEEESPKPVVNDDDDDEAQEAL-----GRRSKTRVKKMN 137

Query: 110 FGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNR 169
               K   + R  V   + L       + +  +  +L++   ++   D + F+++ +G +
Sbjct: 138 KLALKRDKNWRERV---KYLTDTILALKSEEFVAGVLEERRVQMTPTD-FCFVVKWVGQQ 193

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
             W +A++ +     R     +  ++ + ++ +LG+  +  LA  IF  A     G+TV 
Sbjct: 194 N-WQRALELYECLNLRHWYAPN-ARMVATILGVLGKANQEALAVEIFARA-ESSVGDTVQ 250

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK-GGVDFKHVVEIFD 288
            ++A++  Y R+G   +   + + M+     P+LV++N +I+A  K G ++    +++ +
Sbjct: 251 VYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLN 310

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           ++ R+G++PD IT+N+L++ CSR    E A  +F++M       D++TYN ++    + A
Sbjct: 311 EVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCA 370

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +   A E+  E+ +K   P+ VTY++++  +++ G  +   ++  EM   G G D ++YN
Sbjct: 371 RARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYN 430

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T++ +Y K GR ++A+ + ++M+SSG   DAVTY  L+   GK  K +E   +  +M   
Sbjct: 431 TIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDA 490

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V P L TYS LI  Y+K G  +EA + F   +++G+K D + YS ++D   +   ++ A
Sbjct: 491 GVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKA 550

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           + L  EM +EG  P+   Y  ++ A  R    +  VD + RD+
Sbjct: 551 MGLYHEMIREGFTPDNGLYEVMMHALVRENMWD-VVDRIIRDM 592



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 191/399 (47%), Gaps = 20/399 (5%)

Query: 126 EEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKR 185
           +EAL  V  FAR + S+GD ++           Y  ++      G +SK  +      +R
Sbjct: 230 QEALA-VEIFARAESSVGDTVQV----------YNAMMGVYARNGRFSKVKELLDLMRER 278

Query: 186 EERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE----GYGNTVYAFSALISAYGRS 241
                    L S    I  R+    +  N+    LNE    G    +  ++ LISA  R 
Sbjct: 279 ----GCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRE 334

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
              +EA++VF+ M+ +  +P+L TYNA+I   G+     +   E+F ++   G  PD +T
Sbjct: 335 SNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCA-RARKAEELFKELESKGFFPDAVT 393

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           +NSLL   SR G  E  R++  EMV RG  QD  TYNT++    K  + D A +I  +M 
Sbjct: 394 YNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMK 453

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
           +   +P+ VTY+ +ID   KA ++++A N+ SEM   G+     +Y+ ++  YAK G+ E
Sbjct: 454 SSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKRE 513

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           EA      M  SGI+ D + Y+ +L  + +  +  +   ++ +M  +  +P+   Y  ++
Sbjct: 514 EAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMM 573

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
               +  ++    +I R+ ++       V+ S L+   C
Sbjct: 574 HALVRENMWDVVDRIIRDMEELSGMNPQVISSVLVKGGC 612



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 144/673 (21%), Positives = 284/673 (42%), Gaps = 64/673 (9%)

Query: 195  LASAMISILGRLGKVDLAKNIFETALNEG--YGNTVYAFSALISAYGRSGYCQEAISVFN 252
            L   M+S+  R+   + A ++   A   G    N +  +  ++  YG+    Q+A S+  
Sbjct: 739  LYQGMVSVYCRMDLPETAHHLLYHAEKNGIILDNDISVYIDIVETYGKLKIWQKAESLVG 798

Query: 253  SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            S+++   K +   +NA+I A    G  ++    IF+ M+R+G  P   + N LL      
Sbjct: 799  SLRQRCSKMDRKVWNALIHAYAFSGC-YERARAIFNTMMRDGPSPTVDSVNGLLQALIVD 857

Query: 313  GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
                    +  E+   G+     +    L+A  +   +    +I   M A    P +  Y
Sbjct: 858  RRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVY 917

Query: 373  STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
              M+    K  R+ D   M  EM+  G   D    N++L +Y  +  F+   ++ ++++ 
Sbjct: 918  RIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQD 977

Query: 433  SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            + ++ D  TYN L+  Y +  + +E   +  +M++  + P L TY +LI  ++K  +Y++
Sbjct: 978  ASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQ 1037

Query: 493  AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            A ++F E +  G K D   Y  ++     +G    A +LL  M + GI P + T + ++ 
Sbjct: 1038 AEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMV 1097

Query: 553  AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
            ++G+S   E   ++V ++L  +     LD +               + +I  + +    K
Sbjct: 1098 SYGKSGQPE-EAENVLKNL--RTTGVVLDTL-------------PYSSVIDAYLKKGDFK 1141

Query: 613  AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            AG  K                 +M +  I+P+   ++  + A +      +A +LL  L+
Sbjct: 1142 AGIEK---------------LTEMKEAGIEPDHRIWTCFIRAATLSEGTNEAIVLLNALQ 1186

Query: 673  LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
               +  + +   LL    +++  +     + ++ ++ + A    NAL D+LW F  +  A
Sbjct: 1187 ---DAGFDLPIRLLKEKSESLVSEVDQCLERLEPVEDNAAFNLVNALVDLLWAFELRATA 1243

Query: 733  QLVVLEGKRRQVW--------ENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGH- 783
              V     +R ++        +  W     D   +S+G+A   + A L        +G+ 
Sbjct: 1244 SWVFQLAIKRSIYRHDIFRVADKDWGA---DFRKLSAGSA---LDASL--------QGYP 1289

Query: 784  ELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWL 843
            E PK + ++TG  +++ V  D  L+      L  MG+PF       G  ++    +  WL
Sbjct: 1290 ESPKSVVLITGTAEYNMVSLDSTLK----ACLWEMGSPFLPCKTRQGILVAKAHSLRMWL 1345

Query: 844  RESGTLKVLVLHD 856
            ++S     L L D
Sbjct: 1346 KDSPFCLDLELKD 1358



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 171/370 (46%), Gaps = 36/370 (9%)

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           T+L  + K  Q  LA EI A   + ++   V  Y+ M+  YA+ GR      +   M+  
Sbjct: 220 TILGVLGKANQEALAVEIFARAES-SVGDTVQVYNAMMGVYARNGRFSKVKELLDLMRER 278

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEE--ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
           G   D VS+NT+++   K G  E   AL +  E+  SGIR D +TYN L+    ++   +
Sbjct: 279 GCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRESNLE 338

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E   +F  M++    P+L TY+ +I VY +    ++A ++F+E +  G   D V Y++L+
Sbjct: 339 EAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLL 398

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
            A  + G  E    + +EM K G   + +TYN+II  +G+               G+  +
Sbjct: 399 YAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQ--------------GRHDQ 444

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
           +        Q  +D++ +GR  + +   +  L+       K E            V  +M
Sbjct: 445 AM-------QIYRDMKSSGRNPDAV--TYTVLIDSLGKASKVEEAA--------NVMSEM 487

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIW 694
               +KP + T+SA++ A ++    E+A      +R    +   +A+ +++ +  R N  
Sbjct: 488 LDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEM 547

Query: 695 VQALSLFDEV 704
            +A+ L+ E+
Sbjct: 548 KKAMGLYHEM 557



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/401 (22%), Positives = 181/401 (45%), Gaps = 7/401 (1%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
            Y  ++   G    W KA +    ++++   K D+ K+ +A+I      G  + A+ IF T
Sbjct: 777  YIDIVETYGKLKIWQKA-ESLVGSLRQRCSKMDR-KVWNALIHAYAFSGCYERARAIFNT 834

Query: 219  ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + +G   TV + + L+ A        E   V   ++   LK +  +    ++A  + G 
Sbjct: 835  MMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGN 894

Query: 279  DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             F+ V +I++ M   G  P    +  +L +  +         +  EM   G   D+   N
Sbjct: 895  LFE-VQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICN 953

Query: 339  TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            ++L              I  ++   ++ P+  TY+T+I  Y +  R ++  ++ ++M+ L
Sbjct: 954  SILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSL 1013

Query: 399  GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            G+     +Y ++++ + K   +E+A  + +E+ S+G + D   Y+ ++  Y   G + + 
Sbjct: 1014 GLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKA 1073

Query: 459  RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
              +   MK   + P + T   L+  Y K G  +EA  + +  +  G+  D + YS++IDA
Sbjct: 1074 ENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDA 1133

Query: 519  LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
              K G  ++ +  L EM + GI P+    + I   F R+AT
Sbjct: 1134 YLKKGDFKAGIEKLTEMKEAGIEPD----HRIWTCFIRAAT 1170



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 133/693 (19%), Positives = 272/693 (39%), Gaps = 111/693 (16%)

Query: 134  AFARDDVS--LGDILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERK 189
            AF+R+  +  + DI ++   +  G D+ T+  ++   G +G   +A+Q +     +   +
Sbjct: 400  AFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDM--KSSGR 457

Query: 190  NDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS 249
            N      + +I  LG+  KV+ A N+    L+ G   T++ +SALI AY ++G  +EA  
Sbjct: 458  NPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEE 517

Query: 250  VFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL--- 306
             FN M+R  +KP+ + Y+ ++D   +   + K  + ++ +M+R G  PD   +  ++   
Sbjct: 518  TFNCMRRSGIKPDRLAYSVMLDFFLRFN-EMKKAMGLYHEMIREGFTPDNGLYEVMMHAL 576

Query: 307  ----------------------------AVCSRGGLWEAARNLFNEMVHRG--IDQDIF- 335
                                        +V  +GG ++ A  +    +  G  +D +IF 
Sbjct: 577  VRENMWDVVDRIIRDMEELSGMNPQVISSVLVKGGCYDHAAKMLKVAISNGYELDHEIFL 636

Query: 336  --------------------------------TYNTLLDAICKGAQMDLAFEIMAEMPAK 363
                                                L+  +CK  ++D A E        
Sbjct: 637  SIMSSYSSSARYSEACELLEFSREHAPNDIQMITEALIIILCKAKKLDAALEEYRSKGEL 696

Query: 364  NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
                +   Y ++I    +    D A  +FS+M+F G+      Y  ++S+Y ++   E A
Sbjct: 697  GQFRSCTMYESLIQECIQNELFDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETA 756

Query: 424  LLVCKEMESSGI--RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
              +    E +GI    D   Y  ++  YGK   + +   +   ++  C   +   ++ LI
Sbjct: 757  HHLLYHAEKNGIILDNDISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALI 816

Query: 482  DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
              Y+  G Y+ A  IF    + G    V   + L+ AL  +  +     ++ E+   G++
Sbjct: 817  HAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLK 876

Query: 542  PNVVTYNSIIDAFGRSAT------------------TECTVDDVERDLGKQKESANLDAM 583
             +  +    ++AF ++                    T      + R L K K   +++ M
Sbjct: 877  ISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETM 936

Query: 584  -CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
             C  ++   Q   +  N I+K++  +               ++   +  ++QK+    +K
Sbjct: 937  LCEMEEAGFQPDLQICNSILKLYLGI---------------EDFKSMGIIYQKIQDASLK 981

Query: 643  PNVVTFSAILNACSRCNSFEDASMLLEELR-LFDNQVYGVAHGLLMGY-RDNIWVQALSL 700
            P+  T++ ++    R    E+   L+ ++R L           L+  + +  ++ QA  L
Sbjct: 982  PDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEEL 1041

Query: 701  FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
            F+E++        AFY+ +       G  R A+
Sbjct: 1042 FEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAE 1074



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/360 (21%), Positives = 154/360 (42%), Gaps = 5/360 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++    R G  +  ++I E  +  G+G     ++ +I  YG+ G   +A+ ++  MK 
Sbjct: 395 NSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKS 454

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+ VTY  +ID+ GK     +    +  +ML  GV+P   T+++L+   ++ G  E
Sbjct: 455 SGRNPDAVTYTVLIDSLGKAS-KVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKRE 513

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A   FN M   GI  D   Y+ +LD   +  +M  A  +  EM  +  +P+   Y  M+
Sbjct: 514 EAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMM 573

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
               +    D    +  +M+     L  ++   + S+  K G ++ A  + K   S+G  
Sbjct: 574 HALVRENMWDVVDRIIRDME----ELSGMNPQVISSVLVKGGCYDHAAKMLKVAISNGYE 629

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D   + +++  Y    +Y E   + E  +    +   +    LI +  K      A++ 
Sbjct: 630 LDHEIFLSIMSSYSSSARYSEACELLEFSREHAPNDIQMITEALIIILCKAKKLDAALEE 689

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           +R   + G      +Y +LI    +N L + A  +  +M   G+  +   Y  ++  + R
Sbjct: 690 YRSKGELGQFRSCTMYESLIQECIQNELFDVASQIFSDMRFNGVESSECLYQGMVSVYCR 749



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 145/308 (47%), Gaps = 34/308 (11%)

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           +PN    +T++    KA +   A+ +F+  +   +G     YN ++ +YA+ GRF +   
Sbjct: 212 APNARMVATILGVLGKANQEALAVEIFARAES-SVGDTVQVYNAMMGVYARNGRFSKVKE 270

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDE--VRRMFEQMKADCVSPNLLTYSTLIDV 483
           +   M   G   D V++N L+    K G  +     ++  +++   + P+++TY+TLI  
Sbjct: 271 LLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISA 330

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            S+    +EA+ +F + +    + D+  Y+A+I    +      A  L  E+  +G  P+
Sbjct: 331 CSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPD 390

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
            VTYNS++ AF R   TE  V D+  ++ K+           QD+        T N II 
Sbjct: 391 AVTYNSLLYAFSREGNTE-KVRDICEEMVKRG--------FGQDEM-------TYNTIIH 434

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           ++G+       QG+ +          + +++ M      P+ VT++ ++++  + +  E+
Sbjct: 435 MYGK-------QGRHDQ--------AMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEE 479

Query: 664 ASMLLEEL 671
           A+ ++ E+
Sbjct: 480 AANVMSEM 487


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 137/515 (26%), Positives = 256/515 (49%), Gaps = 40/515 (7%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G  + +Y  + +I+ + R      A SV   + +   +P+  T+N +I+  C +  V   
Sbjct: 95  GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKV--S 152

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             V +   M+ NG QP+ +T+NS++    + G    A +L  +M  R +  D+FTY+T++
Sbjct: 153 EAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTII 212

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           D++C+   +D A  +  EM  K I  ++VTY++++ G  KAG+ +D + +  +M    I 
Sbjct: 213 DSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKII 272

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + +++N ++ ++ K G+ +EA  + KEM + GI  + +TYN+L+ GY  Q +  E   M
Sbjct: 273 PNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNM 332

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            + M  +  SP+++T+++LI  Y K     E M++FR+  + GL A+ V YS L+   C+
Sbjct: 333 LDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQ 392

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
           +G +E A  L  EM   G+ P+V+TY  ++D    +   E  ++  E DL  QK   NLD
Sbjct: 393 SGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFE-DL--QKSKMNLD 449

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
                               I ++  ++      GK E+           +F  +    +
Sbjct: 450 --------------------IVMYTIIIEGMCKGGKVEDA--------WNLFCSLPCKGV 481

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALS 699
           KPNV+T++ +++   +  S  +A++LL ++    N+     +  L+    RD     +  
Sbjct: 482 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAK 541

Query: 700 LFDEVKLM----DSSTASAFYNALTDMLWHFGQKR 730
           L +E+K      D+S+     + L+  +W F + R
Sbjct: 542 LIEEMKSCGFSADASSIKMVIDMLSSAVWWFKEPR 576



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 197/360 (54%), Gaps = 1/360 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++++ + + G   LA ++            V+ +S +I +  R G    AIS+F  M+ 
Sbjct: 174 NSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 233

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +K +LVTYN+++    K G  +   V++  DM    + P+ ITFN L+ V  + G  +
Sbjct: 234 KGIKSSLVTYNSLVGGLCKAG-KWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQ 292

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L+ EM+ +GI  +  TYN+L+D  C   ++  A  ++  M   N SP++VT++++I
Sbjct: 293 EANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLI 352

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            GY K  R+D+ + +F ++   G+  + V+Y+ ++  + + G+ E A  + +EM S G+ 
Sbjct: 353 KGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVL 412

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +TY  LL G    GK ++   +FE ++   ++ +++ Y+ +I+   KGG  ++A  +
Sbjct: 413 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNL 472

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F      G+K +V+ Y+ +I  LCK G +  A  LL +M ++G  PN  TYN++I A  R
Sbjct: 473 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLR 532



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 189/359 (52%), Gaps = 3/359 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L R G +D A ++F+    +G  +++  +++L+    ++G   + + +   M  
Sbjct: 209 STIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTS 268

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             + PN++T+N +ID   K G   +   E++ +M+  G+ P+ IT+NSL+   C +  L 
Sbjct: 269 RKIIPNVITFNVLIDVFVKEG-KLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLS 327

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA  N+ + MV      DI T+ +L+   CK  ++D   ++  ++  + +  N VTYS +
Sbjct: 328 EA-NNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSIL 386

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G+ ++G+L+ A  +F EM  LG+  D ++Y  +L      G+ E+AL + ++++ S +
Sbjct: 387 VQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 446

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D V Y  ++ G  K GK ++   +F  +    V PN++TY+ +I    K G   EA  
Sbjct: 447 NLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 506

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + R+ ++ G + +   Y+ LI A  ++G + ++  L++EM   G   +  +   +ID  
Sbjct: 507 LLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 186/387 (48%), Gaps = 12/387 (3%)

Query: 139 DVSLG-DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL 195
           D SL  D+L+K + +   AD +T+  ++  L   G    AI  F    K  E K  +  L
Sbjct: 185 DTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF----KEMETKGIKSSL 240

Query: 196 AS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
            +  +++  L + GK +    + +   +      V  F+ LI  + + G  QEA  ++  
Sbjct: 241 VTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKE 300

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M    + PN +TYN+++D  C +          + D M+RN   PD +TF SL+    + 
Sbjct: 301 MITKGISPNTITYNSLMDGYCMQN--RLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKV 358

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              +    LF ++  RG+  +  TY+ L+   C+  ++++A E+  EM +  + P+V+TY
Sbjct: 359 KRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTY 418

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
             ++DG    G+L+ AL +F +++   + LD V Y  ++    K G+ E+A  +   +  
Sbjct: 419 GILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPC 478

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G++ + +TY  ++ G  K+G   E   +  +M+ D   PN  TY+TLI  + + G    
Sbjct: 479 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTA 538

Query: 493 AMQIFREFKQAGLKADVVLYSALIDAL 519
           + ++  E K  G  AD      +ID L
Sbjct: 539 SAKLIEEMKSCGFSADASSIKMVIDML 565



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 163/330 (49%), Gaps = 9/330 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   G+W+  +Q       R+   N      + +I +  + GK+  A  +++ 
Sbjct: 243 YNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPN--VITFNVLIDVFVKEGKLQEANELYKE 300

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            + +G       +++L+  Y       EA ++ + M R N  P++VT+ ++I    KG  
Sbjct: 301 MITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLI----KGYC 356

Query: 279 DFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
             K V E   +F  + + G+  + +T++ L+    + G  E A  LF EMV  G+  D+ 
Sbjct: 357 KVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVM 416

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TY  LLD +C   +++ A EI  ++    ++ ++V Y+ +I+G  K G+++DA N+F  +
Sbjct: 417 TYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSL 476

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G+  + ++Y  ++S   K G   EA ++ ++ME  G   +  TYN L+  + + G  
Sbjct: 477 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDL 536

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
               ++ E+MK+   S +  +   +ID+ S
Sbjct: 537 TASAKLIEEMKSCGFSADASSIKMVIDMLS 566



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 207/442 (46%), Gaps = 51/442 (11%)

Query: 276 GGVDFKH--VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G VD K    +++F +M+R+   P  + F+   +  +    +    +   +M   GI  +
Sbjct: 40  GIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHN 99

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           I+T N +++  C+  +   A+ ++ ++      P+  T++T+I+G     ++ +A+ + +
Sbjct: 100 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVA 159

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M   G   + V+YN++++   K G    AL + ++M+   ++ D  TY+ ++    + G
Sbjct: 160 RMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDG 219

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
             D    +F++M+   +  +L+TY++L+    K G + + +Q+ ++     +  +V+ ++
Sbjct: 220 CIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFN 279

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            LID   K G ++ A  L  EM  +GI PN +TYNS++D +                  +
Sbjct: 280 VLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQ--------------NR 325

Query: 574 QKESAN-LDAM----CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
             E+ N LD M    CS D         T   +IK  G    ++  +G K          
Sbjct: 326 LSEANNMLDLMVRNNCSPDIV-------TFTSLIK--GYCKVKRVDEGMK---------- 366

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVYGVAHG 684
              +F+K+ K  +  N VT+S ++    +    E A  L +E+     L D   YG+   
Sbjct: 367 ---LFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGI--- 420

Query: 685 LLMGYRDNIWVQ-ALSLFDEVK 705
           LL G  DN  ++ AL +F++++
Sbjct: 421 LLDGLCDNGKLEKALEIFEDLQ 442



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 91/177 (51%), Gaps = 3/177 (1%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+++A+ +F+  ++ G    V  +  L+     +G  ++A+ +F  +++  +  ++V Y
Sbjct: 394 GKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMY 453

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEM 325
             +I+   KGG   +    +F  +   GV+P+ +T+  +++ +C +G L EA   L  +M
Sbjct: 454 TIIIEGMCKGG-KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA-NILLRKM 511

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
              G + +  TYNTL+ A  +   +  + +++ EM +   S +  +   +ID  + A
Sbjct: 512 EEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSA 568



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 50/261 (19%), Positives = 106/261 (40%), Gaps = 40/261 (15%)

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           SGI    V Y   L       K D+   +F++M      P+L+ +S      +    +  
Sbjct: 24  SGISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNL 83

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            +   ++ +  G+  ++   + +I+  C+      A S+L ++ K G  P+  T+N++I+
Sbjct: 84  VLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIN 143

Query: 553 AF-------------GRSATTEC-----TVDDVERDLGKQKE-SANLDAMCSQDDKDVQE 593
                           R     C     T + +   + K  + S  LD +   D+++V+ 
Sbjct: 144 GLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKA 203

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI---LGVFQKMHKLKIKPNVVTFSA 650
              T + II                ++ CR    CI   + +F++M    IK ++VT+++
Sbjct: 204 DVFTYSTII----------------DSLCRDG--CIDAAISLFKEMETKGIKSSLVTYNS 245

Query: 651 ILNACSRCNSFEDASMLLEEL 671
           ++    +   + D   LL+++
Sbjct: 246 LVGGLCKAGKWNDGVQLLKDM 266


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  215 bits (548), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 182/666 (27%), Positives = 298/666 (44%), Gaps = 66/666 (9%)

Query: 26  LKNNHHRQSHHPSSRPHWTSHKVSLTKPPLSPSPRNAPKPAATSTTVAPNPKPFHSLSPL 85
           L+ +H  QS + SS PH +S        P+S +    P+  +  +T+  +PK  HS S L
Sbjct: 19  LRGSH--QSFNLSSEPHPSS------PLPISSTTNPFPELVSKISTILSSPKWEHS-SEL 69

Query: 86  PSSKSELAPD-----FSGRRSTRFVSKMHF--GRPKIAMSTRHSVVAEEALHHVTAFARD 138
                +L P          ++T  V +  F   R K         V+      +    RD
Sbjct: 70  CHLSPKLKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVS-----MLNRLVRD 124

Query: 139 DVSLGDILKKFEFKLCGADDYT--FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA 196
                        +L    D+    +++   N GE  +  Q     +     K D G   
Sbjct: 125 -------------RLFAPADHVRILMIKSCRNEGEVKRVTQ----FLSEINSKYDFGYTL 167

Query: 197 SAMISILGRLGK---VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
            +  ++L +LGK   VDLA++++   LN G   ++  F+ +I+   + G  QEA  + + 
Sbjct: 168 CSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSH 227

Query: 254 MKRYNLKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSR 311
           + RY+  PN  TY ++I   C    +D      +FD M+++G  P+ +T+++L+  +CS 
Sbjct: 228 IFRYDAYPNAFTYTSLILGHCRNHNLDL--AFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
           G L E A ++  EMV +GI+  ++TY   L ++C       A E++ +M  +   PN+ T
Sbjct: 286 GRL-EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT 344

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           ++ +I G ++ G+ + A+ ++ +M   G+    V+YN +++     GRFE A  + K M 
Sbjct: 345 FTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWML 404

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           S G      TYN ++  +   G   +   +F++M     SPN++TY+TLI  Y K G   
Sbjct: 405 SHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLN 464

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            AM++    K  GLK D   Y+ LI    + G +E A SL   M + GI PN VTY +II
Sbjct: 465 NAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
           D +   A     VDD      K  ES NL    S    +V  +G +    I        +
Sbjct: 525 DGYFNLA----KVDDALALFWKMVESGNLP---SSQTYNVMISGFSKTNSISEAENFCGK 577

Query: 612 KAGQGKKEN----------RCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
              QG   N           CR         +F +M K    PN+ T+S+++    +   
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR 637

Query: 661 FEDASM 666
            EDA M
Sbjct: 638 AEDAEM 643



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 160/346 (46%), Gaps = 9/346 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++ A  + E     G     + ++ LIS + R G  + A S+F  M  + + PN VTY
Sbjct: 461 GNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTY 520

Query: 267 NAVIDACGKGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            A+ID    G  +   V   + +F  M+ +G  P   T+N +++  S+      A N   
Sbjct: 521 TAIID----GYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG 576

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           +MV +G+  ++ TY + +D +C+  +  LAF+I  EM  +N  PN+ TYS++I G  + G
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636

Query: 384 RLDDA--LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           R +DA   N+ + +   G   +  +Y T++      GR  EA  +   M+  G++     
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y ALL G  K  K +    +F  M       +L  Y  LI    K    +EA  IF+   
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTML 756

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           +    +D V ++ L+D L K G  +  + LL  M       N  TY
Sbjct: 757 EKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 201/477 (42%), Gaps = 79/477 (16%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT  L  L + G  S+A++      KR    N Q    +A+IS L R GK ++A  ++  
Sbjct: 310 YTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT--FTALISGLSRDGKFEIAIGLYHK 367

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            L +G   T   ++ALI+     G  + A ++F  M  +   P+  TYN +I   C  G 
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMG- 426

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
            D +  + IFD ML+ G  P+ IT+N+L+   C +G L  A R L   M   G+  D +T
Sbjct: 427 -DIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR-LLEIMKGNGLKPDAWT 484

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y  L+    +G +++ A  +   M    ISPN VTY+ +IDGY    ++DDAL +F +M 
Sbjct: 485 YTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMV 544

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVC----------------------------- 427
             G      +YN ++S ++K     EA   C                             
Sbjct: 545 ESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTG 604

Query: 428 ------KEMESSGIRKDAVTYNALLGGYGKQGKYD--EVRRMFEQMKADCVSPNLLTYST 479
                  EME      +  TY++L+ G  ++G+ +  E+  +  ++      PN+ TY+T
Sbjct: 605 LAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTT 664

Query: 480 LID-VYSKGGLYK----------------------------------EAMQIFREFKQAG 504
           L+  +  +G  Y+                                   A+ IF      G
Sbjct: 665 LVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLG 724

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +  +  Y ALI ALCK   +E A  +   M ++    + V +  ++D   +   T+
Sbjct: 725 FQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETD 781



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 176/378 (46%), Gaps = 20/378 (5%)

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFT----YNTLLDAICKG-AQMDLAFEIMAEMPAK- 363
           SR   ++   + F  M++R +   +F        L+   C+   ++    + ++E+ +K 
Sbjct: 102 SRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKY 161

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
           +    + +++T++    K   +D A +M+ +M   GI    +++NT+++I  K GR +EA
Sbjct: 162 DFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEA 221

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
            L+   +       +A TY +L+ G+ +    D    MF++M  D   PN +TYSTLI+ 
Sbjct: 222 KLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLING 281

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
               G  +EAM +  E  Q G++  V  Y+  + +LC  G    AV LL +M K G  PN
Sbjct: 282 LCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPN 341

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDL--GKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
           + T+ ++I    R    E  +    + L  G    +   +A+ +Q    +   GR +   
Sbjct: 342 IQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQ----LCVEGRFETAF 397

Query: 602 IKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNA 654
             +F  +++  +    +      +  C++G       +F KM K    PNV+T++ ++  
Sbjct: 398 -TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYG 456

Query: 655 CSRCNSFEDASMLLEELR 672
             +  +  +A  LLE ++
Sbjct: 457 YCKQGNLNNAMRLLEIMK 474



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 134/289 (46%), Gaps = 9/289 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I     L KVD A  +F   +  G   +   ++ +IS + ++    EA +    M +
Sbjct: 521 TAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVK 580

Query: 257 YNLKPNLVTYNAVIDAC---GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
             L PN++TY + ID     G+ G+ FK    IF +M +    P+  T++SL+  +C  G
Sbjct: 581 QGLLPNVITYTSFIDGLCRNGRTGLAFK----IFHEMEKRNYFPNLYTYSSLIYGLCQEG 636

Query: 313 GLWEAAR-NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
              +A   NL   + H G + ++ TY TL+  +C   +   A +++  M  K + P+   
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y  ++ G  K  +++ ALN+F  M  LG  L    Y  ++    K    EEA  + + M 
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTML 756

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
                 D V +  LL G  K+G+ D   ++   M++   + N  TY  L
Sbjct: 757 EKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 182/666 (27%), Positives = 298/666 (44%), Gaps = 66/666 (9%)

Query: 26  LKNNHHRQSHHPSSRPHWTSHKVSLTKPPLSPSPRNAPKPAATSTTVAPNPKPFHSLSPL 85
           L+ +H  QS + SS PH +S        P+S +    P+  +  +T+  +PK  HS S L
Sbjct: 19  LRGSH--QSFNLSSEPHPSS------PLPISSTTNPFPELVSKISTILSSPKWEHS-SEL 69

Query: 86  PSSKSELAPD-----FSGRRSTRFVSKMHF--GRPKIAMSTRHSVVAEEALHHVTAFARD 138
                +L P          ++T  V +  F   R K         V+      +    RD
Sbjct: 70  CHLSPKLKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVS-----MLNRLVRD 124

Query: 139 DVSLGDILKKFEFKLCGADDYT--FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA 196
                        +L    D+    +++   N GE  +  Q     +     K D G   
Sbjct: 125 -------------RLFAPADHVRILMIKSCRNEGEVKRVTQ----FLSEINSKYDFGYTL 167

Query: 197 SAMISILGRLGK---VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
            +  ++L +LGK   VDLA++++   LN G   ++  F+ +I+   + G  QEA  + + 
Sbjct: 168 CSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSH 227

Query: 254 MKRYNLKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSR 311
           + RY+  PN  TY ++I   C    +D      +FD M+++G  P+ +T+++L+  +CS 
Sbjct: 228 IFRYDAYPNAFTYTSLILGHCRNHNLDL--AFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
           G L E A ++  EMV +GI+  ++TY   L ++C       A E++ +M  +   PN+ T
Sbjct: 286 GRL-EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT 344

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           ++ +I G ++ G+ + A+ ++ +M   G+    V+YN +++     GRFE A  + K M 
Sbjct: 345 FTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWML 404

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           S G      TYN ++  +   G   +   +F++M     SPN++TY+TLI  Y K G   
Sbjct: 405 SHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLN 464

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            AM++    K  GLK D   Y+ LI    + G +E A SL   M + GI PN VTY +II
Sbjct: 465 NAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
           D +   A     VDD      K  ES NL    S    +V  +G +    I        +
Sbjct: 525 DGYFNLA----KVDDALALFWKMVESGNLP---SSQTYNVMISGFSKTNSISEAENFCGK 577

Query: 612 KAGQGKKEN----------RCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
              QG   N           CR         +F +M K    PN+ T+S+++    +   
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR 637

Query: 661 FEDASM 666
            EDA M
Sbjct: 638 AEDAEM 643



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 161/346 (46%), Gaps = 9/346 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++ A  + E     G     + ++ LIS + R G  + A S+F  M  + + PN VTY
Sbjct: 461 GNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTY 520

Query: 267 NAVIDACGKGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            A+ID    G  +   V   + +F  M+ +G  P   T+N +++  S+      A N   
Sbjct: 521 TAIID----GYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG 576

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           +MV +G+  ++ TY + +D +C+  +  LAF+I  EM  +N  PN+ TYS++I G  + G
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636

Query: 384 RLDDA--LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           R +DA   N+ + +   G   +  +Y T++      GR  EA  +   M+  G++     
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y ALL G  K  K +    +F  M       +L  Y  LI    K    +EA  IF+   
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTML 756

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           +    +D V+++ L+D L K G  +  + LL  M       N  TY
Sbjct: 757 EKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 201/477 (42%), Gaps = 79/477 (16%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT  L  L + G  S+A++      KR    N Q    +A+IS L R GK ++A  ++  
Sbjct: 310 YTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT--FTALISGLSRDGKFEIAIGLYHK 367

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            L +G   T   ++ALI+     G  + A ++F  M  +   P+  TYN +I   C  G 
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMG- 426

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
            D +  + IFD ML+ G  P+ IT+N+L+   C +G L  A R L   M   G+  D +T
Sbjct: 427 -DIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR-LLEIMKGNGLKPDAWT 484

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y  L+    +G +++ A  +   M    ISPN VTY+ +IDGY    ++DDAL +F +M 
Sbjct: 485 YTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMV 544

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVC----------------------------- 427
             G      +YN ++S ++K     EA   C                             
Sbjct: 545 ESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTG 604

Query: 428 ------KEMESSGIRKDAVTYNALLGGYGKQGKYD--EVRRMFEQMKADCVSPNLLTYST 479
                  EME      +  TY++L+ G  ++G+ +  E+  +  ++      PN+ TY+T
Sbjct: 605 LAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTT 664

Query: 480 LID-VYSKGGLYK----------------------------------EAMQIFREFKQAG 504
           L+  +  +G  Y+                                   A+ IF      G
Sbjct: 665 LVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLG 724

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +  +  Y ALI ALCK   +E A  +   M ++    + V +  ++D   +   T+
Sbjct: 725 FQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETD 781



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 176/378 (46%), Gaps = 20/378 (5%)

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFT----YNTLLDAICKG-AQMDLAFEIMAEMPAK- 363
           SR   ++   + F  M++R +   +F        L+   C+   ++    + ++E+ +K 
Sbjct: 102 SRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKY 161

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
           +    + +++T++    K   +D A +M+ +M   GI    +++NT+++I  K GR +EA
Sbjct: 162 DFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEA 221

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
            L+   +       +A TY +L+ G+ +    D    MF++M  D   PN +TYSTLI+ 
Sbjct: 222 KLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLING 281

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
               G  +EAM +  E  Q G++  V  Y+  + +LC  G    AV LL +M K G  PN
Sbjct: 282 LCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPN 341

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDL--GKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
           + T+ ++I    R    E  +    + L  G    +   +A+ +Q    +   GR +   
Sbjct: 342 IQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQ----LCVEGRFETAF 397

Query: 602 IKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNA 654
             +F  +++  +    +      +  C++G       +F KM K    PNV+T++ ++  
Sbjct: 398 -TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYG 456

Query: 655 CSRCNSFEDASMLLEELR 672
             +  +  +A  LLE ++
Sbjct: 457 YCKQGNLNNAMRLLEIMK 474



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 134/289 (46%), Gaps = 9/289 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I     L KVD A  +F   +  G   +   ++ +IS + ++    EA +    M +
Sbjct: 521 TAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVK 580

Query: 257 YNLKPNLVTYNAVIDAC---GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
             L PN++TY + ID     G+ G+ FK    IF +M +    P+  T++SL+  +C  G
Sbjct: 581 QGLLPNVITYTSFIDGLCRNGRTGLAFK----IFHEMEKRNYFPNLYTYSSLIYGLCQEG 636

Query: 313 GLWEAAR-NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
              +A   NL   + H G + ++ TY TL+  +C   +   A +++  M  K + P+   
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y  ++ G  K  +++ ALN+F  M  LG  L    Y  ++    K    EEA  + + M 
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTML 756

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
                 D V +  LL G  K+G+ D   ++   M++   + N  TY  L
Sbjct: 757 EKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 231/473 (48%), Gaps = 38/473 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L ++GK+D A+N+ +  L       V  +++LI    ++    EA  +   MK 
Sbjct: 131 NCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKE 190

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P+ V YNA+++   K     + V ++ ++M+  G +PD  ++N+++A     G +E
Sbjct: 191 SGLTPDTVAYNALLNGLCKQN-QLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYE 249

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +  +M+ +    D+ TYN+L+D  CK ++MD A  ++ +M  +  +P V+TY+T+I
Sbjct: 250 EAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLI 309

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+++A RL DA  +  +M   GI  D V+YN +L    K G+ EEA  + + M      
Sbjct: 310 GGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCA 369

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTY+ L+ G  K GK D+ R + E M      PNL+T++T+ID + K G   E  ++
Sbjct: 370 PDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKV 429

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
               K+     DVV YS LID  CK   ++ A ++L      GI P+  +Y+S+++    
Sbjct: 430 LELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCS 483

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
           +              GK +E+  +      D    Q    T +    + G L   + G  
Sbjct: 484 T--------------GKVEEAQEV-----MDLMTKQGCPPTSSHYALIIGGLCDVERGDE 524

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
                        L + Q M +   +PN+ T+S ++N   +    EDA  +L+
Sbjct: 525 A------------LKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLD 565



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 227/470 (48%), Gaps = 63/470 (13%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD---------- 279
           + ALI+ + R+G  +  + + N M      P+++T+N ++ A C  G +D          
Sbjct: 27  YGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRGKM 86

Query: 280 ------FKHVV---------------EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
                 F + +               ++ D+M++    PD   +N L+A   + G  +AA
Sbjct: 87  WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAA 146

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           RN+   M+ R    D+ TY +L+   C+   +D A ++M +M    ++P+ V Y+ +++G
Sbjct: 147 RNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNG 206

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K  +L++   +  EM   G   D  SYNTV++   + G++EEA  + ++M       D
Sbjct: 207 LCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPD 266

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VTYN+L+ G+ K  K DE  R+ E M     +P ++TY+TLI  +S+     +A ++  
Sbjct: 267 VVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVME 326

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +  +AG+  D+V Y+ L+D LCK G +E A  LL+ M ++   P+VVTY+ +++   +  
Sbjct: 327 DMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCK-- 384

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
                       LGK  ++  L  M    ++  Q    T N +I  F +  A K  +G K
Sbjct: 385 ------------LGKVDDARLLLEM--MLERGCQPNLVTFNTMIDGFCK--AGKVDEGHK 428

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
                        V + M ++   P+VVT+S +++   + N  +DA  +L
Sbjct: 429 -------------VLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL 465



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 178/358 (49%), Gaps = 9/358 (2%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++ K+D A+ + E  +      TV  ++ LI  + R+    +A  V   M +  + P+LV
Sbjct: 279 KVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLV 338

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           TYN ++D  C  G ++  H  E+ + M+     PD +T++ L+    + G  + AR L  
Sbjct: 339 TYNCLLDGLCKAGKLEEAH--ELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLE 396

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
            M+ RG   ++ T+NT++D  CK  ++D   +++  M   + +P+VVTYST+IDGY KA 
Sbjct: 397 MMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKAN 456

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           R+ DA         LGI  D+ SY+++L      G+ EEA  V   M   G    +  Y 
Sbjct: 457 RMQDAF------AILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYA 510

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            ++GG     + DE  +M + M      PNL TYS LI+   K    ++A+ +     + 
Sbjct: 511 LIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEK 570

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           G   DV  Y++LID  CK   +++A      M   G  P+ + YN +I  F +S   E
Sbjct: 571 GCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVE 628



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 177/384 (46%), Gaps = 35/384 (9%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F +   +  +P   T+ +L+   SR G  +    + NEM+ R    D+ T+NT+L A C+
Sbjct: 12  FRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQ 71

Query: 347 GAQMDLAFEIMAEMPAKN-ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
              +D A   ++    K   SP   TY  +I G  +  R+D+A  +  EM       D  
Sbjct: 72  IGDLDRA---LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAA 128

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            YN +++   K+G+ + A  V K M       D +TY +L+ G  +    DE R++ E+M
Sbjct: 129 VYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKM 188

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           K   ++P+ + Y+ L++   K    +E  ++  E  +AG + D   Y+ ++  LC++G  
Sbjct: 189 KESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKY 248

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           E A  +L++M ++   P+VVTYNS++D F + +     +D+ ER L              
Sbjct: 249 EEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVS----KMDEAERLLEDM----------- 293

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
                    GR     +  +  L+   +   +  +  R        V + M K  I P++
Sbjct: 294 --------VGRRCAPTVITYTTLIGGFSRADRLADAYR--------VMEDMFKAGISPDL 337

Query: 646 VTFSAILNACSRCNSFEDASMLLE 669
           VT++ +L+   +    E+A  LLE
Sbjct: 338 VTYNCLLDGLCKAGKLEEAHELLE 361



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 152/336 (45%), Gaps = 33/336 (9%)

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TY  L+    +     +  EI  EM A+  SP+V+T++T++  Y + G LD AL+ F   
Sbjct: 26  TYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRGK 85

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
            +        +Y  ++    +  R +EA  +  EM       DA  YN L+ G  K GK 
Sbjct: 86  MWCSP--TAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKI 143

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D  R + + M      P+++TY++LI    +     EA ++  + K++GL  D V Y+AL
Sbjct: 144 DAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNAL 203

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           ++ LCK   +E    LL+EM + G  P+  +YN+++     S   E        + GK  
Sbjct: 204 LNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYE--------EAGKIL 255

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
           E   ++  C  D         T N ++  F ++   K  + ++             + + 
Sbjct: 256 EKM-IEKKCGPD-------VVTYNSLMDGFCKV--SKMDEAER-------------LLED 292

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           M   +  P V+T++ ++   SR +   DA  ++E++
Sbjct: 293 MVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDM 328



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 20/192 (10%)

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           E    FRE      K     Y ALI    + G  +  + + +EM      P+V+T+N+I+
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 552 DAFGRSATTECTVDDVERDL----GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
            A+       C + D++R L    GK   S      C       Q   R D +  ++  +
Sbjct: 67  KAY-------CQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQ-CQRID-EAYQLLDE 117

Query: 608 LVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           ++ +          C    LC +G       V + M +    P+V+T+++++  C + N+
Sbjct: 118 MIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNA 177

Query: 661 FEDASMLLEELR 672
            ++A  L+E+++
Sbjct: 178 LDEARKLMEKMK 189


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 195/361 (54%), Gaps = 9/361 (2%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGN------TVYAFSALISAYGRSGYCQEAISVFN 252
           +++ L +  ++D A  +F+    +G  N       V  F+ LI    + G  ++ +S+  
Sbjct: 322 LVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLE 381

Query: 253 SMKRYNL-KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
            MK  N+ +PN VTYN +ID   K G +F    E+F  M   GVQP+ IT N+L+    +
Sbjct: 382 EMKMGNINRPNTVTYNCLIDGFFKAG-NFDRAHELFRQMNEEGVQPNVITLNTLVDGLCK 440

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            G    A   FNEM  +G+  +  TY  L+ A C    ++ A +   EM +   SP+ V 
Sbjct: 441 HGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVV 500

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y ++I G   AGR++DA  + S++K  G  LDR  YN ++S + K  + E    +  EME
Sbjct: 501 YYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEME 560

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            +G++ D +TYN L+   GK G +    ++ E+M  + + P+++TY  +I  Y       
Sbjct: 561 ETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVD 620

Query: 492 EAMQIFREF-KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           E M+IF E    + +  + V+Y+ LIDALC+N  V+ A+SL+++M  + +RPN  TYN+I
Sbjct: 621 EGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAI 680

Query: 551 I 551
           +
Sbjct: 681 L 681



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 214/466 (45%), Gaps = 68/466 (14%)

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID-ACGKGGVDFKHVVEIFDDM 290
           +AL++  GR    +    +   M++  ++P++VT+  +++  C    +D    +++FD +
Sbjct: 285 NALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRID--EALQVFDRL 342

Query: 291 LRNG------VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ-DIFTYNTLLDA 343
              G      V+PD + FN+L+    + G  E   +L  EM    I++ +  TYN L+D 
Sbjct: 343 RGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDG 402

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
             K    D A E+  +M  + + PNV+T +T++DG  K GR+  A+  F+EMK  G+  +
Sbjct: 403 FFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGN 462

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +Y  ++S +  +     A+   +EM SSG   DAV Y +L+ G    G+ ++   +  
Sbjct: 463 AATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVS 522

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           ++K    S +   Y+ LI  + K    +   ++  E ++ G+K D + Y+ LI  L K G
Sbjct: 523 KLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTG 582

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN---- 579
              +A  ++++M KEG+RP+VVTY +II A+     ++  VD+  +  G+   ++     
Sbjct: 583 DFATASKVMEKMIKEGLRPSVVTYGAIIHAY----CSKKNVDEGMKIFGEMCSTSKVPPN 638

Query: 580 -------LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
                  +DA+C  +D D                                       + +
Sbjct: 639 TVIYNILIDALCRNNDVDRA-------------------------------------ISL 661

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
            + M   +++PN  T++AIL          D  ML +   L D  V
Sbjct: 662 MEDMKVKRVRPNTTTYNAILKG------VRDKKMLHKAFELMDRMV 701



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 243/515 (47%), Gaps = 41/515 (7%)

Query: 233 ALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK--HVVEIFDDM 290
            L+    +SG   +A+ V + M + N   + VT   V     + G  F    VV +   +
Sbjct: 179 GLLRVLLKSGRAGDALHVLDEMPQANSGFS-VTGEIVFGELVRSGRSFPDGEVVGLVAKL 237

Query: 291 LRNGVQPDRITFNSLLA-VCS---RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              GV PD      L+  +C     G  WE    + + ++  G   D  + N LL  + +
Sbjct: 238 GERGVFPDGFKLTQLVGKLCGDQKNGVAWE----VLHCVMRLGGAVDAASCNALLTWLGR 293

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK------FLGI 400
           G  +    E++AEM  + I P+VVT+  +++   KA R+D+AL +F  ++      ++G+
Sbjct: 294 GRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGV 353

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI-RKDAVTYNALLGGYGKQGKYDEVR 459
             D V +NT++    K+G+ E+ L + +EM+   I R + VTYN L+ G+ K G +D   
Sbjct: 354 EPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAH 413

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +F QM  + V PN++T +TL+D   K G    A++ F E K  GLK +   Y+ALI A 
Sbjct: 414 ELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAF 473

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA- 578
           C    +  A+   +EM   G  P+ V Y S+I     +      ++D    + K K +  
Sbjct: 474 CGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAG----RMNDASVVVSKLKLAGF 529

Query: 579 NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG-KKENRCRQEILCILG------ 631
           +LD  C     +V  +G    + ++   +L+ E    G K +      ++  LG      
Sbjct: 530 SLDRSCY----NVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFA 585

Query: 632 ----VFQKMHKLKIKPNVVTFSAILNA-CSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
               V +KM K  ++P+VVT+ AI++A CS+ N  E   +  E           V + +L
Sbjct: 586 TASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNIL 645

Query: 687 MGY--RDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
           +    R+N   +A+SL +++K+      +  YNA+
Sbjct: 646 IDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAI 680



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 119/269 (44%), Gaps = 4/269 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+IS    +  ++ A   FE  L+ G       + +LIS    +G   +A  V + +K 
Sbjct: 467 TALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKL 526

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
                +   YN +I   C K  ++   V E+  +M   GV+PD IT+N+L++   + G +
Sbjct: 527 AGFSLDRSCYNVLISGFCKKKKLE--RVYELLTEMEETGVKPDTITYNTLISYLGKTGDF 584

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-PAKNISPNVVTYST 374
             A  +  +M+  G+   + TY  ++ A C    +D   +I  EM     + PN V Y+ 
Sbjct: 585 ATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNI 644

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +ID   +   +D A+++  +MK   +  +  +YN +L          +A  +   M    
Sbjct: 645 LIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEA 704

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            R D +T   L       G+ ++++   E
Sbjct: 705 CRPDYITMEVLTEWLSAVGEIEKLKHFVE 733



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 122/269 (45%), Gaps = 6/269 (2%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
           A  YT L+         ++A+QCF   +      +    +  ++IS L   G+++ A  +
Sbjct: 463 AATYTALISAFCGVNNINRAMQCFEEML--SSGCSPDAVVYYSLISGLCIAGRMNDASVV 520

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
                  G+      ++ LIS + +    +    +   M+   +KP+ +TYN +I   GK
Sbjct: 521 VSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGK 580

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRG-IDQD 333
            G DF    ++ + M++ G++P  +T+ +++ A CS+  + E  + +F EM     +  +
Sbjct: 581 TG-DFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMK-IFGEMCSTSKVPPN 638

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
              YN L+DA+C+   +D A  +M +M  K + PN  TY+ ++ G      L  A  +  
Sbjct: 639 TVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMD 698

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
            M       D ++   +    + +G  E+
Sbjct: 699 RMVEEACRPDYITMEVLTEWLSAVGEIEK 727


>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
 gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
          Length = 844

 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 256/523 (48%), Gaps = 10/523 (1%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQ--GKLASAMISILGRLGKVDLAKNI 215
           D   LL+ L   G+  +AI  F + V      + +   K    MI ILGR  K  +A  +
Sbjct: 160 DIVSLLKALDVLGKSERAILLFEWVVSNSVSGDVKLDSKAVELMIRILGRESKYSIALKL 219

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
            +    + Y   V A + ++ AY R+G  ++AI++F  MK   L P+LVTYN ++D  GK
Sbjct: 220 LDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGK 279

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            G  +  ++++ D+M   G+Q D  T +++++ C R GL   A+  F E+   G +    
Sbjct: 280 MGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTV 339

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYN LL    K      A  I+ EM   N + + VTY+ ++  Y +AG  ++   +   M
Sbjct: 340 TYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTM 399

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G+  + V+Y TV++ Y + G+  +AL +  +M+ SG   +  TYN++L   GK+ + 
Sbjct: 400 TRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRS 459

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           +E+ ++   M+ +   PN +T++TL+ +    G +K    +FRE K  G +     ++ L
Sbjct: 460 EEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTL 519

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR----SATTECTVDDVERDL 571
           I A  + G    A  + DEM K G  P   TYN++++A  R     A     +D   +  
Sbjct: 520 ISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGF 579

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQII--KVFGQLVAEKAGQGKKENRCRQEILCI 629
              + S +L   C     +V+   R    I   ++F   V  +        +CR  +  +
Sbjct: 580 KPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRT-LILANFKCRA-VRGM 637

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              F+++ K   KP++V F+++L+  ++ N +E A  +L+ +R
Sbjct: 638 ERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIR 680



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 229/454 (50%), Gaps = 51/454 (11%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASA----MISILGRLGKVD 210
           G   Y  LL+  G  G +S+A+         +E +++   L S     +++   R G  +
Sbjct: 337 GTVTYNALLQVFGKAGIYSEALNIL------KEMEDNNCTLDSVTYNELVAAYVRAGFYE 390

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
               + +T   +G       ++ +I+AYGR+G   +A+ +FN MK+    PN+ TYN+++
Sbjct: 391 EGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSIL 450

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
              GK     + +++I  DM  NG  P+RIT+N+LLA+C   G  +   ++F EM + G 
Sbjct: 451 ALLGKKSRS-EEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGF 509

Query: 331 DQDIFTYNTLLDAICK-GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +    T+NTL+ A  + G+++D A ++  EM     +P   TY+ +++  A+ G    A 
Sbjct: 510 EPGKDTFNTLISAYGRCGSELDAA-KMYDEMMKAGFTPCATTYNALLNALARRGDWKAAE 568

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGR----------------FEEALLV------- 426
           ++  +M+  G   +  S++ +L  YAK G                 F   +L+       
Sbjct: 569 SVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILAN 628

Query: 427 --CK----------EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
             C+          E+  +G + D V +N++L  + K   Y+  ++M + ++   + P+L
Sbjct: 629 FKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDL 688

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           +TY++L+++Y++ G   +A +I +   ++G   D+V Y+ +I   C+ GL++ A+ ++ E
Sbjct: 689 VTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSE 748

Query: 535 MTKEGIRPNVVTYNSIIDAF-GRSATTECTVDDV 567
           MT  GI P + TYN+ +  + GR    E  VD+V
Sbjct: 749 MTTRGICPCIFTYNTFVSGYAGRGMFAE--VDEV 780



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/520 (25%), Positives = 240/520 (46%), Gaps = 64/520 (12%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            S +IS  GR G ++ AK  F    + GY      ++AL+  +G++G   EA+++   M+
Sbjct: 306 CSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEME 365

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             N   + VTYN ++ A  + G  ++    + D M R GV P+ +T+ +++    R G  
Sbjct: 366 DNNCTLDSVTYNELVAAYVRAGF-YEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKE 424

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  LFN+M   G   ++ TYN++L  + K ++ +   +I+++M      PN +T++T+
Sbjct: 425 VKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTL 484

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +      G+     ++F EMK  G    + ++NT++S Y + G   +A  +  EM  +G 
Sbjct: 485 LAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGF 544

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
              A TYNALL    ++G +     +   M+     PN  ++S ++  Y+KGG  +   +
Sbjct: 545 TPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLER 604

Query: 496 I-----------------------------------FREFKQAGLKADVVLYSALIDALC 520
           I                                   F E  + G K D+V++++++    
Sbjct: 605 IGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFA 664

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC-TVDDVERDLGKQKESAN 579
           KN + E A  +LD + + G++P++VTYNS+++ + R    EC   +++ + L K  ES +
Sbjct: 665 KNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRG--ECWKAEEILKGLIKSGESPD 722

Query: 580 L-------DAMCSQDDKDVQEAGRTDNQI--------IKVFGQLVAEKAGQGKKENRCRQ 624
           L          C Q    +QEA R  +++        I  +   V+  AG+G        
Sbjct: 723 LVSYNTIIKGFCRQGL--MQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAE---- 776

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
               +  V   M +   KPN +T+  I++   +   ++DA
Sbjct: 777 ----VDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDA 812



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 144/607 (23%), Positives = 264/607 (43%), Gaps = 86/607 (14%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF---- 335
           F  +  +FD +    ++ D +   SLL      G  E A  LF  +V   +  D+     
Sbjct: 142 FDSLNALFDSVKSELLEVDIV---SLLKALDVLGKSERAILLFEWVVSNSVSGDVKLDSK 198

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
               ++  + + ++  +A +++ ++P    S +V   +T++  Y++ G+   A+ MF  M
Sbjct: 199 AVELMIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERM 258

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGR-FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           K  G+    V+YN +L +Y K+GR +++ L +  EM + G++ D  T + ++   G++G 
Sbjct: 259 KDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGL 318

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            +E +  F ++K+    P  +TY+ L+ V+ K G+Y EA+ I +E +      D V Y+ 
Sbjct: 319 INEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNE 378

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT--------------- 559
           L+ A  + G  E   +++D MT++G+ PN VTY ++I+A+GR+                 
Sbjct: 379 LVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSG 438

Query: 560 ---TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
                CT + +   LGK+  S  +  + S    D++  G   N+I   +  L+A    +G
Sbjct: 439 CVPNVCTYNSILALLGKKSRSEEMIKILS----DMRINGCPPNRI--TWNTLLAMCGDKG 492

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
           K +         +  VF++M     +P   TF+ +++A  RC S  DA+           
Sbjct: 493 KHK--------FVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAA----------- 533

Query: 677 QVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVV 736
                                  ++DE+     +  +  YNAL + L   G  + A+ V+
Sbjct: 534 ----------------------KMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVL 571

Query: 737 LEGKRRQVWENVWSESCLDLHLMSSGA-ARAMVHAWLLNIHSIVFEGHELPKLLSILTGW 795
           L+ + +    N  S S L LH  + G   R      L  I   +++G   P  + + T  
Sbjct: 572 LDMRNKGFKPNETSFS-LMLHCYAKGGNVRG-----LERIGKDIYDGQIFPSWVLLRTLI 625

Query: 796 GKHSKVVGDGALRRAVEVLL-TGMGAPFWVANCNLGRFIST-----GPMVASWLRESGTL 849
             + K      + RA E L+  G      + N  L  F           +   +RESG  
Sbjct: 626 LANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQ 685

Query: 850 KVLVLHD 856
             LV ++
Sbjct: 686 PDLVTYN 692



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 170/344 (49%), Gaps = 17/344 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++++ G  GK     ++F    N G+      F+ LISAYGR G   +A  +++ M +
Sbjct: 482 NTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMK 541

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P   TYNA+++A  + G D+K    +  DM   G +P+  +F+ +L   ++GG   
Sbjct: 542 AGFTPCATTYNALLNALARRG-DWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGG--- 597

Query: 317 AARNLFNEMVHRGI-DQDIFTYNTLLDAI------CKGAQ-MDLAFEIMAEMPAKNISPN 368
             R L  E + + I D  IF    LL  +      C+  + M+ AFE   E+      P+
Sbjct: 598 NVRGL--ERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFE---ELMKNGYKPD 652

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           +V +++M+  +AK    + A  M   ++  G+  D V+YN+++++YA+ G   +A  + K
Sbjct: 653 MVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILK 712

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            +  SG   D V+YN ++ G+ +QG   E  R+  +M    + P + TY+T +  Y+  G
Sbjct: 713 GLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRG 772

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           ++ E  ++     Q   K + + Y  ++D  CK    + A+  +
Sbjct: 773 MFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDFI 816



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 141/311 (45%), Gaps = 42/311 (13%)

Query: 132 VTAFAR-----DDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKRE 186
           ++A+ R     D   + D + K  F  C A  Y  LL  L  RG+W KA +     ++ +
Sbjct: 520 ISAYGRCGSELDAAKMYDEMMKAGFTPC-ATTYNALLNALARRGDW-KAAESVLLDMRNK 577

Query: 187 ERKNDQGKLASAM--------ISILGRLGK--------------------------VDLA 212
             K ++   +  +        +  L R+GK                          V   
Sbjct: 578 GFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGM 637

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
           +  FE  +  GY   +  F++++S + ++   + A  + + ++   L+P+LVTYN++++ 
Sbjct: 638 ERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNM 697

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
             + G  +K   EI   ++++G  PD +++N+++    R GL + A  + +EM  RGI  
Sbjct: 698 YARRGECWK-AEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICP 756

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
            IFTYNT +             E+++ M  KN  PN +TY  ++DGY KA +  DA++  
Sbjct: 757 CIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDFI 816

Query: 393 SEMKFLGIGLD 403
             +K +    D
Sbjct: 817 FGIKNIDDSFD 827


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 184/664 (27%), Positives = 295/664 (44%), Gaps = 121/664 (18%)

Query: 192 QGKL-ASAMISILGRL-GKVDLAKNIFE-TALNEGYGNTVYAFSALISAYGRSGYCQEAI 248
           +G+L  S   +IL +L G  +L    ++  A   G+ +T+++F+  ++   +SG   +AI
Sbjct: 72  KGRLHPSVAAAILAQLDGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAI 131

Query: 249 SVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVV------------------------ 284
            +F S      +PN  TY+ ++ A  K G D +  +                        
Sbjct: 132 DLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSRSVADYNIVLQSLC 191

Query: 285 ---------EIF-DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
                    EIF  +M R+GV P  +T+N+++    +     A   LF E+V RG   D+
Sbjct: 192 RAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDV 251

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TYNTL+D++CK   ++ A  +  +M +++  PNVVTYS +I+G  K GR+D+A  +  E
Sbjct: 252 VTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQE 311

Query: 395 M--KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR--KDAVTYNALLGGYG 450
           M  K   +  + ++YN+ L    K     EA  + + +    +R   D VT++ L+ G  
Sbjct: 312 MTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 371

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K G+ DE   +F+ M A    PN++TY+ L++   K    + A  +       G+  DV+
Sbjct: 372 KCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI 431

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS------------- 557
            YS L+DA CK   V+ A+ LL  M   G  PNVVT+NSIID   +S             
Sbjct: 432 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDM 491

Query: 558 ---------ATTECT-VDDVERDLGKQKESANLDAMCSQDD-------------KDVQEA 594
                      T CT +D + R     +  A LDAM   D               DV  A
Sbjct: 492 ALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRA 551

Query: 595 GRTDNQIIKV--------FGQLVAE--KAGQGKKENRCRQEI------------------ 626
            +  N+++++        F  L+A   KAG  ++ +   +E+                  
Sbjct: 552 LQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDG 611

Query: 627 LCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFD 675
           LC  G       +   M  L + PNVVT++A+++   +    E+A   LEE+     + D
Sbjct: 612 LCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPD 671

Query: 676 NQVYG-VAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
           +  YG + + L    R +    AL L  E+K       +  YN L D LW  GQ   A +
Sbjct: 672 SITYGSLVYALCRASRTD---DALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQA-I 727

Query: 735 VVLE 738
            VLE
Sbjct: 728 TVLE 731



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 232/480 (48%), Gaps = 43/480 (8%)

Query: 201 SILGRLGKVDLAKNIFET----ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SI+  L K D +   F+     AL  G       +  LI    R+G   +A ++ ++M  
Sbjct: 470 SIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP- 528

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+   +N  I+   K G D    +++++ ML   + PD++TFN L+A   + G +E
Sbjct: 529 ---DPDTYAFNCCINGLSKLG-DVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFE 584

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF EMV + +  D+ T+  L+D +CK  Q++ A +I+  M    + PNVVTY+ ++
Sbjct: 585 QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALV 644

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G  K+GR+++A     EM   G   D ++Y +++    +  R ++AL +  E++S G  
Sbjct: 645 HGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWD 704

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTYN L+ G  K G+ ++   + E+M      P+++TY+TLID   K G  +EA ++
Sbjct: 705 PDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL 764

Query: 497 FREFKQAGLKA---DVVLYSALIDALCKNGLVESAVSLLDEMTKEG--IRPNVVTYNSII 551
             +      +    +VV YS LI+ LCK G ++ A  L+ EM ++   + PN++TYNS +
Sbjct: 765 HGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFL 824

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
           D   + +                 E+  L  M S  D  ++ +  T       F  L+  
Sbjct: 825 DGLCKQSM--------------MAEACEL--MRSLRDGSLRVSPDT-----VTFSTLIDG 863

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               G+ +  C         VF  M      PNVVT++ ++N   + +  E A  ++E +
Sbjct: 864 LCKCGQTDEACN--------VFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESM 915



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 157/582 (26%), Positives = 253/582 (43%), Gaps = 95/582 (16%)

Query: 157  DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
            D Y F   +  L   G+ S+A+Q +   ++ E   +      + +I+   + G  + A  
Sbjct: 531  DTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKV--TFNILIAGACKAGNFEQASA 588

Query: 215  IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
            +FE  + +     V  F ALI    ++G  + A  + + M    + PN+VTYNA++    
Sbjct: 589  LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLC 648

Query: 275  KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG---------------------- 312
            K G   +   +  ++M+ +G  PD IT+ SL+    R                       
Sbjct: 649  KSG-RIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDT 707

Query: 313  --------GLW-----EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
                    GLW     E A  +  EMV +G   D+ TYNTL+D++CK   ++ A  +  +
Sbjct: 708  VTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGD 767

Query: 360  MPAK---NISPNVVTYSTMIDGYAKAGRLDDALNMFSEM--KFLGIGLDRVSYNTVLSIY 414
            M ++      PNVVTYS +I+G  K GR+D+A  +  EM  K   +  + ++YN+ L   
Sbjct: 768  MSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGL 827

Query: 415  AKLGRFEEALLVCKEMESSGIR--KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
             K     EA  + + +    +R   D VT++ L+ G  K G+ DE   +F+ M A    P
Sbjct: 828  CKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVP 887

Query: 473  NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
            N++TY+ L++   K    + A  +       G+  DV+ YS L+DA CK   V+ A+ LL
Sbjct: 888  NVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELL 947

Query: 533  DEMTKEGIRPNVVTYNSIIDAFGRS----------------------ATTECT-VDDVER 569
              M   G  PNVVT+NSIID   +S                        T CT +D + R
Sbjct: 948  HGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFR 1007

Query: 570  DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI 629
                 +    LDAM    D D        N + K+         G   +           
Sbjct: 1008 TGWAGQAEVLLDAM---PDPDTYAFNCCINGLSKL---------GDVSR----------- 1044

Query: 630  LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                 +M +L++ P+ VTF+ ++    +  +FE AS L EE+
Sbjct: 1045 --ALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEM 1084



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 237/483 (49%), Gaps = 48/483 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L + G++D A ++F+  +  GY   V  ++AL++   ++   + A ++  SM  
Sbjct: 364 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 423

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + P+++TY+ ++DA C    VD    +E+   M   G  P+ +TFNS++    +    
Sbjct: 424 KGVTPDVITYSVLVDAFCKASRVD--EALELLHGMASRGCTPNVVTFNSIIDGLCKSDRS 481

Query: 316 EAARNLFNEM-VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             A  +F++M +  G+  D  TY TL+D + +  +   A  ++  MP     P+   ++ 
Sbjct: 482 GEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNC 537

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
            I+G +K G +  AL +++ M  L +  D+V++N +++   K G FE+A  + +EM +  
Sbjct: 538 CINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 597

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++ D +T+ AL+ G  K G+ +  R + + M    V PN++TY+ L+    K G  +EA 
Sbjct: 598 LQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEAC 657

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           Q   E   +G   D + Y +L+ ALC+    + A+ L+ E+   G  P+ VTYN ++D  
Sbjct: 658 QFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGL 717

Query: 555 GRSATTECTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
            +S  TE  +  +E  +GK         +  +D++C     D++EA R    +       
Sbjct: 718 WKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKA--GDLEEARRLHGDM------- 768

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
                    + +RC     C+             PNVVT+S ++N   +    ++A  L+
Sbjct: 769 -------SSRVSRC-----CV-------------PNVVTYSVLINGLCKVGRIDEARELI 803

Query: 669 EEL 671
           +E+
Sbjct: 804 QEM 806



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 174/336 (51%), Gaps = 13/336 (3%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYG--NTVYAFSALISAYGRSGYCQEAISVFNSM 254
            S +I+ L ++G++D A+ + +  + +       +  +++ +    +     EA  +  S+
Sbjct: 784  SVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSL 843

Query: 255  KRYNLK--PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            +  +L+  P+ VT++ +ID   K G        +FDDM+  G  P+ +T+N L+    + 
Sbjct: 844  RDGSLRVSPDTVTFSTLIDGLCKCG-QTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKT 902

Query: 313  GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
               E A  +   MV +G+  D+ TY+ L+DA CK + +D A E++  M ++  +PNVVT+
Sbjct: 903  DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTF 962

Query: 373  STMIDGYAKAGRLDDALNMFSEMKFL-GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
            +++IDG  K+ +  +A  MF +M    G+  D+++Y T++    + G   +A ++   M 
Sbjct: 963  NSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP 1022

Query: 432  SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
                  D   +N  + G  K G   +V R   +M    + P+ +T++ LI    K G ++
Sbjct: 1023 D----PDTYAFNCCINGLSKLG---DVSRALHRMLELELVPDKVTFNILIAGACKAGNFE 1075

Query: 492  EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
            +A  +F E     L+ DV+ + ALID LCK G VE+
Sbjct: 1076 QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEA 1111



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 175/344 (50%), Gaps = 15/344 (4%)

Query: 228  VYAFSALISAYGRSGYCQEAISVFNSMKR--YNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
            V  +S LI+   + G   EA  +   M R   ++ PN++TYN+ +D   K  +      E
Sbjct: 780  VVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSM-MAEACE 838

Query: 286  IFDDMLRNG---VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            +    LR+G   V PD +TF++L+    + G  + A N+F++M+  G   ++ TYN L++
Sbjct: 839  LMRS-LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMN 897

Query: 343  AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
             +CK  +M+ A  ++  M  K ++P+V+TYS ++D + KA  +D+AL +   M   G   
Sbjct: 898  GLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTP 957

Query: 403  DRVSYNTVLSIYAKLGRFEEALLVCKEME-SSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + V++N+++    K  +  EA  +  +M    G+  D +TY  L+ G  + G   +   +
Sbjct: 958  NVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVL 1017

Query: 462  FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
             + M      P+   ++  I+  SK G    A+    E +   L  D V ++ LI   CK
Sbjct: 1018 LDAMP----DPDTYAFNCCINGLSKLGDVSRALHRMLELE---LVPDKVTFNILIAGACK 1070

Query: 522  NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
             G  E A +L +EM  + ++P+V+T+ ++ID   ++   E T D
Sbjct: 1071 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWD 1114



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 28/189 (14%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK- 255
            S ++    +   VD A  +     + G    V  F+++I    +S    EA  +F+ M  
Sbjct: 928  SVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTL 987

Query: 256  RYNLKPNLVTYNAVID---------------------------ACGKGGVDFKHVVEIFD 288
            ++ L P+ +TY  +ID                            C  G      V     
Sbjct: 988  KHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALH 1047

Query: 289  DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
             ML   + PD++TFN L+A   + G +E A  LF EMV + +  D+ T+  L+D +CK  
Sbjct: 1048 RMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG 1107

Query: 349  QMDLAFEIM 357
            Q++  ++IM
Sbjct: 1108 QVEATWDIM 1116


>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
 gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
          Length = 821

 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/535 (27%), Positives = 261/535 (48%), Gaps = 11/535 (2%)

Query: 142 LGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKR--EERKNDQGKLASAM 199
           L D  +  +F+L   D    +L+ L   G+  +AI  F + V        N   +    M
Sbjct: 122 LNDFFESCKFELFQVD-LIGVLKALDLSGDCERAILLFEWLVLNLGTGNVNLDNQAVELM 180

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
             ILGR  +  +A  +F+    + Y   V A++ ++ +Y R G  + A+++F  M    L
Sbjct: 181 ARILGRESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGL 240

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            P LVTYN ++D  GK G  +  ++ + D+M   G+  D  T +++++ C R GL + A+
Sbjct: 241 SPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAK 300

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
             F  +  +G      TYN LL    K      A  IM EM   N  P+ VTY+ ++  Y
Sbjct: 301 EFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAY 360

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            +AG  ++   +   M   GI  + V+Y T+++ Y +  + ++AL +  +M+ SG   + 
Sbjct: 361 VRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNV 420

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
            TYNA+LG  GK+ + +E+ ++   MK D  +PN +T++T++ +    G++K   ++F+E
Sbjct: 421 CTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQE 480

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA- 558
            K  G + D   ++ LI A  + G    A  + DEM + G  P+V TYN++++A  R   
Sbjct: 481 MKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGD 540

Query: 559 --TTECTVDDVERDLGKQKESA-NLDAMCSQDDKDVQEAGRTDNQIIK--VFGQLVAEKA 613
             T E  + D++    K  E++ +L          V+   R +  I    +F   +  + 
Sbjct: 541 WRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRT 600

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
                  +CR  +  +   FQ + K   KP++V F+++L+  SR N  + A  ++
Sbjct: 601 -LILANFKCRA-LAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIM 653



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 191/406 (47%), Gaps = 36/406 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI+  GR  +VD A ++++     G    V  ++A++   G+    +E + +   MK 
Sbjct: 389 TTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKV 448

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               PN +T+N ++  CG  G+  K+V  +F +M   G +PDR TFN+L+    R G   
Sbjct: 449 DGCAPNRITWNTMLSMCGNKGMH-KYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDI 507

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +++EM+  G    + TYN LL+A+ +      A  ++ +M  K   P+  +YS ++
Sbjct: 508 DAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLIL 567

Query: 377 DGYAKAG------RLDDAL-----------------------------NMFSEMKFLGIG 401
           + YAK G      R++  +                               F  ++  G  
Sbjct: 568 NSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYK 627

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D V +N++LS++++    + A  +   ++  G++ D VTYN+L+  Y + G+  +   +
Sbjct: 628 PDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEI 687

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
             +++      +L++Y+T+I  + + GL  EA++   E    G++  +V Y+  +     
Sbjct: 688 LRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAA 747

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
            G+      +L  MTK   RPN +TY  ++D + ++   +  +D V
Sbjct: 748 KGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMDFV 793



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 223/487 (45%), Gaps = 73/487 (14%)

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
           +Q  +A ++   +P  + S +V  Y+T++  Y++ G+ + A+ +F +M   G+    V+Y
Sbjct: 188 SQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTY 247

Query: 408 NTVLSIYAKLGR-FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           N +L +Y K+GR + + L +  EM S G+  D  T + ++   G++G  DE +  F  +K
Sbjct: 248 NVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLK 307

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           +   +P  +TY+ L+ V+ K G+Y EA+ I +E +      D V Y+ L+ A  + G  E
Sbjct: 308 SQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYE 367

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE------------------CTVDDVE 568
              +L+D MT+ GI+PN VTY ++I+A+GR+A  +                  CT + + 
Sbjct: 368 EGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAIL 427

Query: 569 RDLGKQKESANL-DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
             LGK+ +S  +   +C     D++  G   N+I   +  +++    +G  +   R    
Sbjct: 428 GMLGKKSQSEEMMKILC-----DMKVDGCAPNRI--TWNTMLSMCGNKGMHKYVKR---- 476

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM 687
               VFQ+M     +P+  TF+ ++ A  RC S  DA  + +E+             L  
Sbjct: 477 ----VFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEM-------------LEA 519

Query: 688 GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN 747
           G+  ++                    A YNAL + L   G  R A+ V+ + K +    +
Sbjct: 520 GFTPSV--------------------ATYNALLNALARRGDWRTAESVIKDMKNKGFKPS 559

Query: 748 VWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGAL 807
             S S     L+ +  A+      +  I   +++GH  P  + + T    + K      +
Sbjct: 560 ETSYS-----LILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGM 614

Query: 808 RRAVEVL 814
            RA + L
Sbjct: 615 ERAFQAL 621



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 177/377 (46%), Gaps = 45/377 (11%)

Query: 201 SILGRLGKVDLAKNIFETALN---EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           +ILG LGK   ++ + +   +   +G       ++ ++S  G  G  +    VF  MK  
Sbjct: 425 AILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSC 484

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             +P+  T+N +I A G+ G D     +I+D+ML  G  P   T+N+LL   +R G W  
Sbjct: 485 GFEPDRDTFNTLITASGRCGSDI-DAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRT 543

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKG------------------------------ 347
           A ++  +M ++G      +Y+ +L++  KG                              
Sbjct: 544 AESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLIL 603

Query: 348 --------AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
                   A M+ AF+ + +   K   P++V +++M+  +++    D A  +   ++  G
Sbjct: 604 ANFKCRALAGMERAFQALQKHGYK---PDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECG 660

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           +  D V+YN+++ +YA+ G   +A  + +E+++SG + D ++YN ++ G+ +QG   E  
Sbjct: 661 LQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEAL 720

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           R   +M +  + P ++TY+T +  Y+  G++ E  ++     +   + + + Y  ++D  
Sbjct: 721 RTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGY 780

Query: 520 CKNGLVESAVSLLDEMT 536
           CK    + A+  +  +T
Sbjct: 781 CKAKKFKEAMDFVSTIT 797


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 157/581 (27%), Positives = 281/581 (48%), Gaps = 40/581 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI +L +  +VD A  +FE   +      VYA++ +I  YG  G   EA S+    KR
Sbjct: 311 TSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKR 370

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+++ YN ++   G+ G   +  + I + M +    P+  ++N L+ +  + G  E
Sbjct: 371 KGCIPSVIAYNCILTCLGRKG-KVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELE 428

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AA  + + M   G+  +I T N ++D +CK  ++D A  I   +  K  +P+ VT+ ++I
Sbjct: 429 AALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLI 488

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  + G+++DA  ++ +M   G   + V Y +++  + K GR E+   + KEM   G  
Sbjct: 489 DGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCS 548

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +  N  +    K G+ ++ R +FE++KA  ++P++ +YS LI    KGG  K+  ++
Sbjct: 549 PDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKL 608

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F E K+ GL  D   Y+ +ID  CK+G V  A  LL+EM  +G++P VVTY S+ID   +
Sbjct: 609 FYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAK 668

Query: 557 SATTECTVDDVERD--LGKQKESANLD---AMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
                  +D ++    L ++ +S  +D    + S       + GR D   + +  +L+ +
Sbjct: 669 -------IDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYL-ILEELMQK 720

Query: 612 KAGQGKKENRC-------RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
                     C        +EI   L  FQ M  LK  PN VT+S ++N   +   F  A
Sbjct: 721 GLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKA 780

Query: 665 SMLLEELR---------LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAF 715
            +  +E++          +   + G+A       R    ++A  LF+  K       SA 
Sbjct: 781 FVFWQEMQKQGLKPNTITYTTMISGLA-------RVGNVLEAKDLFERFKSSGGIPDSAC 833

Query: 716 YNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDL 756
           YNA+ + L +  +   A ++  E + +     ++S++C+ L
Sbjct: 834 YNAMIEGLSNANKAMDAYILFEETRLKGC--RIYSKTCVVL 872



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 144/575 (25%), Positives = 266/575 (46%), Gaps = 53/575 (9%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS-----AMISILGRLGKVDLAK 213
           Y  ++   G+ G++++A           ER+  +G + S      +++ LGR GKV+ A 
Sbjct: 345 YNTMIMGYGSVGKFNEAYSLL-------ERQKRKGCIPSVIAYNCILTCLGRKGKVEEAL 397

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
            I E A+       + +++ LI    ++G  + A+ V +SMK   L PN++T N +ID  
Sbjct: 398 RILE-AMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRL 456

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
            K          IF  +      PD +TF SL+    R G    A  L+ +M+  G   +
Sbjct: 457 CKAQ-RLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPN 515

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
              Y +L+    K  + +   +I  EM  +  SP+++  +  +D   KAG ++    +F 
Sbjct: 516 AVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFE 575

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           E+K  G+  D  SY+ ++    K G  ++   +  EM+  G+  D   YN ++ G+ K G
Sbjct: 576 EIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSG 635

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           K ++  ++ E+MK   + P ++TY ++ID  +K     EA  +F E K   +  +VV+YS
Sbjct: 636 KVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYS 695

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           +LID   K G ++ A  +L+E+ ++G+ PN  T+N ++DA  ++       ++++  L  
Sbjct: 696 SLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKA-------EEIDEAL-- 746

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
                    +C Q+ K+++         I V G     K  +                 +
Sbjct: 747 ---------VCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKA-------------FVFW 784

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGY 689
           Q+M K  +KPN +T++ +++  +R  +  +A  L E  +    + D+  Y   + ++ G 
Sbjct: 785 QEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACY---NAMIEGL 841

Query: 690 RD-NIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
            + N  + A  LF+E +L      S     L D L
Sbjct: 842 SNANKAMDAYILFEETRLKGCRIYSKTCVVLLDAL 876



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 197/420 (46%), Gaps = 38/420 (9%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++I  LGR GKV+ A  ++E  L+ G       +++LI  + + G  ++   ++  M   
Sbjct: 486 SLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHR 545

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
              P+L+  N  +D   K G + +    +F+++   G+ PD  +++ L+    +GG  + 
Sbjct: 546 GCSPDLMLLNNYMDCVFKAG-EIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKD 604

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP---------- 367
              LF EM  +G+  D   YN ++D  CK  +++ A++++ EM  K + P          
Sbjct: 605 TYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVID 664

Query: 368 -------------------------NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
                                    NVV YS++IDG+ K GR+D+A  +  E+   G+  
Sbjct: 665 GLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 724

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           +  ++N +L    K    +EAL+  + M++     + VTY+ ++ G  K  K+++    +
Sbjct: 725 NTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFW 784

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           ++M+   + PN +TY+T+I   ++ G   EA  +F  FK +G   D   Y+A+I+ L   
Sbjct: 785 QEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNA 844

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE--CTVDDVERDLGKQKESANL 580
                A  L +E   +G R    T   ++DA  ++   E    V  V R++ K + +  L
Sbjct: 845 NKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLREMAKSQHATRL 904



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 212/480 (44%), Gaps = 39/480 (8%)

Query: 209 VDLAKNIFETAL-NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           VD A +  + AL +EG   TV+    ++  Y      ++A++ F+ M     +P LV   
Sbjct: 50  VDDASHSQDNALKSEGMRKTVHDVCRVLDTYPWGAALEDALNTFDEMP----QPELVV-- 103

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQ---PDRITFNSLLAVCSRGGLWEAARNLFNE 324
            VI    +   D +  +  F  + R   Q   P+   +N+LL + +R    E    +  E
Sbjct: 104 GVI----RRLKDVRVALHYFRWVERKTKQLHSPE--AYNALLMLMARTRNLEYLEQILEE 157

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G      T   ++ +  K  ++  AF ++  M      P    Y+T+I   + A  
Sbjct: 158 MSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHE 217

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
            D  L +  +M+ +G  +    + T++ ++A+ GR + AL +  EM+S+    D V YN 
Sbjct: 218 ADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNV 277

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
            +  +GK GK D   + F ++K+  + P+ +T++++I V  K     EA+++F E     
Sbjct: 278 CIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNK 337

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
               V  Y+ +I      G    A SLL+   ++G  P+V+ YN I+   GR    E  +
Sbjct: 338 SVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEAL 397

Query: 565 DDVE---RDLGKQKESAN--LDAMCSQDDKD--------VQEAGRTDNQIIKVFGQLVAE 611
             +E    D      S N  +D +C   + +        ++EAG   N II V   ++ +
Sbjct: 398 RILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPN-IITV--NIMID 454

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +     K  R  +     LG+  K+      P+ VTF ++++   R     DA ML E++
Sbjct: 455 RLC---KAQRLDEACSIFLGLDHKV----CTPDSVTFCSLIDGLGRHGKVNDAYMLYEKM 507



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 101/456 (22%), Positives = 176/456 (38%), Gaps = 63/456 (13%)

Query: 375 MIDGYAKAGRLDDALNMFSEMKF--LGIGLDR-------------------------VSY 407
           ++D Y     L+DALN F EM    L +G+ R                          +Y
Sbjct: 76  VLDTYPWGAALEDALNTFDEMPQPELVVGVIRRLKDVRVALHYFRWVERKTKQLHSPEAY 135

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N +L + A+    E    + +EM  +G      T   ++  + K  K  E   + E M+ 
Sbjct: 136 NALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRK 195

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
               P    Y+TLI   S        + + R+ ++ G +  V L++ LI    + G V++
Sbjct: 196 FKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDA 255

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
           A+SLLDEM       ++V YN  ID FG+         D+      + +S  L      D
Sbjct: 256 ALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKV-----DMAWKFFHELKSQGL----VPD 306

Query: 588 DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
           D        T   +I V  +  AE+  +              + +F+++   K  P V  
Sbjct: 307 DV-------TFTSMIGVLCK--AERVDEA-------------VELFEELDSNKSVPCVYA 344

Query: 648 FSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVK 705
           ++ ++        F +A  LLE  +        +A+  ++    R     +AL + + +K
Sbjct: 345 YNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK 404

Query: 706 LMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAAR 765
            MD++     YN L DML   G+   A  V    K   ++ N+ + + +   L  +    
Sbjct: 405 -MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLD 463

Query: 766 AMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKV 801
                +L   H +     +     S++ G G+H KV
Sbjct: 464 EACSIFLGLDHKVC--TPDSVTFCSLIDGLGRHGKV 497


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 265/536 (49%), Gaps = 34/536 (6%)

Query: 151  FKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVD 210
            FK  G   Y  L+    + G   +A++      K E          + ++  LG+ G++D
Sbjct: 523  FKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVV--TYTTLVDGLGKAGRLD 580

Query: 211  LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
             A ++      +G   +V  +S+L++++ +    +E++S+F+ M R     ++ TY+ VI
Sbjct: 581  EAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVI 640

Query: 271  DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
            +   K   D    +++F  M   G++P    + +LL+   +    + A  +FNE+    +
Sbjct: 641  NCLCKSD-DVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSL 699

Query: 331  DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
              D F YN +++ + K  ++D A +++  M  +NI P++ TY++++DG  K+GRL++A N
Sbjct: 700  VPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFN 759

Query: 391  MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
            MF++M   G   D V+Y +++ +  K G+   AL++ + M       D VTY++L+   G
Sbjct: 760  MFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLG 819

Query: 451  KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
            K+G+ +E    FE   +   +PN+  YS+LID + K G+   A+++F E ++     ++V
Sbjct: 820  KEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIV 879

Query: 511  LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
             Y+ L+  L K G +  A  LL+EM K G  P++VTYN +ID  G+       VD+ E  
Sbjct: 880  TYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGM----VDEAESY 935

Query: 571  LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
              + KE            K +     T   +I+  G++                ++L   
Sbjct: 936  FKRMKE------------KGIVPDVITFTSLIESLGKV---------------DKLLEAC 968

Query: 631  GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
             +F  M +    P+VVT++ +++   R     +A+M+  E+++      G+  G++
Sbjct: 969  ELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 257/514 (50%), Gaps = 36/514 (7%)

Query: 230  AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
             ++ L+SA+  +G+  EA+ +   MK++   P +VTY  ++D  GK G      V +  +
Sbjct: 530  TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAG-RLDEAVSLLRE 588

Query: 290  MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
            M + G +P  +T++SL+A   +    E + +LF+EMV +G   D+ TY+ +++ +CK   
Sbjct: 589  MEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDD 648

Query: 350  MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            +D A ++   M  + + P +  Y T++    K  ++D AL +F+E++   +  D   YN 
Sbjct: 649  VDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708

Query: 410  VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
            +++   K  R +EA  +   M++  I  D  TY +LL G GK G+ +E   MF +M  + 
Sbjct: 709  MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768

Query: 470  VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
              P+++ Y++L+DV  KGG    A+ IFR   +     DVV YS+LID+L K G VE A 
Sbjct: 769  HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828

Query: 530  SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
               +    +G  PNV  Y+S+ID+FG+    +  ++  E ++ +++   N+    +    
Sbjct: 829  YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFE-EMQRRQCPPNI-VTYNNLLS 886

Query: 590  DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
             + +AGR +          VAEK                   + ++M K+   P++VT++
Sbjct: 887  GLAKAGRLN----------VAEK-------------------LLEEMEKVGCVPDLVTYN 917

Query: 650  AILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKL 706
             +++   +    ++A    + ++   +  + +   +    +G  D + ++A  LFD ++ 
Sbjct: 918  ILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKL-LEACELFDSMEE 976

Query: 707  MDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGK 740
               + +   YN L D+L   G+   A ++  E K
Sbjct: 977  EGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMK 1010



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 164/637 (25%), Positives = 288/637 (45%), Gaps = 63/637 (9%)

Query: 139 DVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASA 198
           D  +G  L++ +FKL    +   +   + N+ +   A   F +A +++   +  G   + 
Sbjct: 133 DAEMGKQLERLKFKL----NPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYSHTVGTY-TL 187

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI  L    + D    I      EG+  +++  ++L+  +G +     A+ +FN MK + 
Sbjct: 188 MIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFG 247

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             P+   YN V++   KGG  +   V +F  + +  +QPD  TF   +   +R G  + A
Sbjct: 248 CNPSTNMYNFVLELLVKGGF-YHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPA 306

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
                EM+  GID  + T+  L+DA+ K   +D A +    M     SPNVVTY+T+++G
Sbjct: 307 AEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNG 366

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
            AKAGRL++A  +F EMK      D ++YNT++    K G  + A  + KEM+  G+  +
Sbjct: 367 LAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPN 426

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
             TYN ++   GK G+  E  ++F  +K     P++ TY+TLIDV  KGG   + + I +
Sbjct: 427 LRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIK 486

Query: 499 EFKQAGLKADV-------------------------------VLYSALIDALCKNGLVES 527
           E  + G +  +                               + Y+ L+ A   NG V+ 
Sbjct: 487 EMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDE 546

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL----DAM 583
           AV LL+ M K    P VVTY +++D  G++   +  V  + R++ KQ    ++      M
Sbjct: 547 AVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAV-SLLREMEKQGCEPSVVTYSSLM 605

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC-------ILGVFQKM 636
            S   +D +E      + + +F ++V +               LC        L VF +M
Sbjct: 606 ASFYKRDQEE------ESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRM 659

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGV-AHGLLMGYRD 691
            +  ++P +  +  +L++  +    + A  +  EL+    + D  VY +  +GL+   R 
Sbjct: 660 KEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRV 719

Query: 692 NIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           +   +A  L D +K  +       Y +L D L   G+
Sbjct: 720 D---EACKLVDSMKNQNILPDLFTYTSLLDGLGKSGR 753



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 146/579 (25%), Positives = 254/579 (43%), Gaps = 100/579 (17%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L   G   +A  C  F   +E   +      + +I  LG+ G+ D+A  +F+ 
Sbjct: 360 YTTLVNGLAKAGRLEEA--CEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKE 417

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + G    +  ++ +IS  G++G   EA  +F+ +K     P++ TYN +ID  GKGG 
Sbjct: 418 MKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGG- 476

Query: 279 DFKHVVEIFDDMLRNGVQ-----------------PDR--------------ITFNSLLA 307
               V+ I  +M+  G +                  DR              IT+N+L++
Sbjct: 477 QMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMS 536

Query: 308 VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
                G  + A  L   M        + TY TL+D + K  ++D A  ++ EM  +   P
Sbjct: 537 AFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEP 596

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK----------L 417
           +VVTYS+++  + K  + +++L++F EM   G   D  +Y+ V++   K           
Sbjct: 597 SVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVF 656

Query: 418 GRFEE-------------------------ALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           GR +E                         AL +  E++ S +  D   YN ++ G  K 
Sbjct: 657 GRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKS 716

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
            + DE  ++ + MK   + P+L TY++L+D   K G  +EA  +F +  + G + DVV Y
Sbjct: 717 NRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAY 776

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG 572
           ++L+D L K G +  A+ +   M K+   P+VVTY+S+ID+ G+    E      E  + 
Sbjct: 777 TSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSIS 836

Query: 573 KQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
           K                     G T N  + V+  L+     +G  +          L +
Sbjct: 837 K---------------------GCTPN--VGVYSSLIDSFGKKGMVDRA--------LEL 865

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           F++M + +  PN+VT++ +L+  ++      A  LLEE+
Sbjct: 866 FEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEM 904



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 154/289 (53%), Gaps = 1/289 (0%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            ++++  LG+ G+++ A N+F     EG+   V A+++L+   G+ G    A+ +F +M +
Sbjct: 742  TSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAK 801

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                P++VTY+++ID+ GK G   +     F++ +  G  P+   ++SL+    + G+ +
Sbjct: 802  KRCVPDVVTYSSLIDSLGKEG-RVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVD 860

Query: 317  AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
             A  LF EM  R    +I TYN LL  + K  ++++A +++ EM      P++VTY+ +I
Sbjct: 861  RALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILI 920

Query: 377  DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            DG  K G +D+A + F  MK  GI  D +++ +++    K+ +  EA  +   ME  G  
Sbjct: 921  DGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYN 980

Query: 437  KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
               VTYN L+   G+ GK  E   +F +MK     P+ +T   +  + S
Sbjct: 981  PSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILS 1029


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 226/429 (52%), Gaps = 8/429 (1%)

Query: 168 NRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN--IFETALNEGYG 225
           + G    A+QCF    K +     +G     ++  + RL  V++ ++  ++   L+ GY 
Sbjct: 188 DSGFTPDAVQCFRLVTKNKFPVPIRG--CENLLRRVVRLRPVEIERSWALYLEVLDSGYP 245

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
             +Y F+ L+  + ++G    A  VF+ + +  L+P +V++N +I  C K G D +    
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSG-DVEEGFR 304

Query: 286 IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +   M   GV PD  TF++L+  +C  G L E +  LF+EM  RG+  +  T+ TL+D  
Sbjct: 305 LKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSL-LFDEMCGRGLVPNGVTFTTLIDGQ 363

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CKG ++DLA +    M A+ + P++VTY+ +I+G  K G L +A  + +EM   G+  D+
Sbjct: 364 CKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDK 423

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           +++ T++    K G  E AL + + M   GI  D V + AL+ G  ++G+  +  RM   
Sbjct: 424 ITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTD 483

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M +    P+  TY+ +ID + K G  K   ++ +E +  G    VV Y+AL++ LCK G 
Sbjct: 484 MLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQ 543

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           +++A  LLD M   G+ PN +TYN ++D   +  ++   VD    + G   + A+  A+ 
Sbjct: 544 MKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSS-VDVDIFNSEKGLVTDYASYTALV 602

Query: 585 SQDDKDVQE 593
           ++  K  ++
Sbjct: 603 NESSKTSKD 611



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 211/442 (47%), Gaps = 32/442 (7%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLK-PNLVTYNAVIDACGKGGVDFKHVVEIFD 288
            F ALISAY  SG+  +A+  F  + +     P     N +        V+ +    ++ 
Sbjct: 178 VFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYL 237

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           ++L +G  P    FN L+    + G    AR +F+E+  RG+   + ++NTL+   CK  
Sbjct: 238 EVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSG 297

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            ++  F +   M ++ + P+V T+S +I+G  K GRLD+   +F EM   G+  + V++ 
Sbjct: 298 DVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFT 357

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T++    K G+ + AL   + M + G+R D VTYNAL+ G  K G   E RR+  +M A 
Sbjct: 358 TLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTAS 417

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + P+ +T++TLID   K G  + A++I R   + G++ D V ++ALI  LC+ G V  A
Sbjct: 418 GLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDA 477

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
             +L +M   G +P+  TY  +ID F       C   DV+      KE            
Sbjct: 478 GRMLTDMLSAGFKPDDPTYTMVIDCF-------CKKGDVKMGFKLLKE------------ 518

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
             +Q  G     +   +  L+     QG+ +N    ++L        M  + + PN +T+
Sbjct: 519 --MQSDGHVPGVV--TYNALMNGLCKQGQMKN---AKML-----LDAMLNVGVAPNDITY 566

Query: 649 SAILNACSRCNSFEDASMLLEE 670
           + +L+  S+  S  D  +   E
Sbjct: 567 NILLDGHSKHGSSVDVDIFNSE 588



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 33/201 (16%)

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P +  ++ L+  + K G    A  +F E  + GL+  VV ++ LI   CK+G VE    L
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL 305

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCSQDDKD 590
              M  EG+ P+V T++++I+   +               G+  E + L D MC +    
Sbjct: 306 KGVMESEGVCPDVFTFSALINGLCKE--------------GRLDEGSLLFDEMCGR---- 347

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
               G   N +   F  L+  +   GK +          L  FQ M    ++P++VT++A
Sbjct: 348 ----GLVPNGV--TFTTLIDGQCKGGKVD--------LALKNFQMMLAQGVRPDLVTYNA 393

Query: 651 ILNACSRCNSFEDASMLLEEL 671
           ++N   +    ++A  L+ E+
Sbjct: 394 LINGLCKVGDLKEARRLVNEM 414


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 204/366 (55%), Gaps = 7/366 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L R G ++ A+++FE    +G    +  +++LI  YG+ G    A+SVF  MK   
Sbjct: 257 VIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAG 316

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFD---DMLRNGVQPDRITFNSLLAVCSRGGLW 315
            +P+++TYN++I+   K    F+ + + F+    M + G+QP+ +T+++L+    + G+ 
Sbjct: 317 CEPDVITYNSLINCFCK----FERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGML 372

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A   F +M+  G+  + FTY +L+DA CK   ++ AF++ +EM    ++ N+VTY+ +
Sbjct: 373 LEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTAL 432

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +DG  + GR+ +A  +F  +   G  L++  Y ++   Y K    E+A+ + +EM    +
Sbjct: 433 LDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNL 492

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D + Y   + G  +Q + ++   +  +M    ++ N   Y+TLID Y K G   EA+ 
Sbjct: 493 KPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVN 552

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           + +E +  G+K  VV Y  LID LCK GLV+ AV   D MT+ G++PN++ Y ++ID   
Sbjct: 553 LLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLC 612

Query: 556 RSATTE 561
           ++   E
Sbjct: 613 KNDCLE 618



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 231/475 (48%), Gaps = 34/475 (7%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            + ++L  LG ++ A+  F           V + + L+    +S     A+S F  M   
Sbjct: 186 TLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVA 245

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            L P++ TYN VI    + G D +    +F++M   G++PD +T+NSL+    + G+   
Sbjct: 246 GLSPSVFTYNMVIGCLAREG-DLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTG 304

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A ++F EM   G + D+ TYN+L++  CK  ++  AFE +  M  + + PNVVTYST+ID
Sbjct: 305 AVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLID 364

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            + KAG L +A   F +M  +G+  +  +Y +++    K+G   EA  +  EM+ +G+  
Sbjct: 365 AFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNL 424

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + VTY ALL G  + G+  E   +F  +     + N   Y++L   Y K  + ++AM I 
Sbjct: 425 NIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDIL 484

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E  +  LK D++LY   I  LC+   +E +++++ EM   G+  N   Y ++IDA+ + 
Sbjct: 485 EEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFK- 543

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV-FGQLVAEKAGQG 616
                        +GK  E+ NL          +QE      +I  V +G L+      G
Sbjct: 544 -------------VGKTTEAVNL----------LQEMQDLGIKITVVTYGVLIDGLCKIG 580

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             +   R         F  M +  ++PN++ ++A+++   + +  E+A  L  E+
Sbjct: 581 LVQQAVR--------YFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEM 627



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 201/401 (50%), Gaps = 38/401 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I   G++G +  A ++FE   + G    V  +++LI+ + +     +A    + MK+
Sbjct: 290 NSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQ 349

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             L+PN+VTY+ +IDA  K G+      + F DM+R G+QP+  T+ SL+ A C  G L 
Sbjct: 350 RGLQPNVVTYSTLIDAFCKAGM-LLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLN 408

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAIC------------------------------ 345
           EA + L +EM   G++ +I TY  LLD +C                              
Sbjct: 409 EAFK-LESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSL 467

Query: 346 -----KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
                K   M+ A +I+ EM  KN+ P+++ Y T I G  +   ++D++ +  EM   G+
Sbjct: 468 FHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGL 527

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             +   Y T++  Y K+G+  EA+ + +EM+  GI+   VTY  L+ G  K G   +  R
Sbjct: 528 TANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVR 587

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
            F+ M  + + PN++ Y+ LID   K    +EA  +F E    G+  D ++Y++LID   
Sbjct: 588 YFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNM 647

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           K+G    A+SL + M + G+  ++  Y S+I  F R    +
Sbjct: 648 KHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQ 688



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 194/388 (50%), Gaps = 34/388 (8%)

Query: 287 FDDML---RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           F DML   RN  +P    F++L  V    G+ E AR  F +M    +   + + N LL  
Sbjct: 166 FFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHR 225

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           + K ++  LA     +M    +SP+V TY+ +I   A+ G L+ A ++F EMK  G+  D
Sbjct: 226 LSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPD 285

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V+YN+++  Y K+G    A+ V +EM+ +G   D +TYN+L+  + K  +  +      
Sbjct: 286 IVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLH 345

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
            MK   + PN++TYSTLID + K G+  EA + F +  + GL+ +   Y++LIDA CK G
Sbjct: 346 GMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIG 405

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
            +  A  L  EM + G+  N+VTY +++D                   G+ +E+  L   
Sbjct: 406 DLNEAFKLESEMQQAGVNLNIVTYTALLDGLCED--------------GRMREAEELFGA 451

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
                  + +AG T NQ  +++  L       G  + +  ++ + IL   ++M+K  +KP
Sbjct: 452 -------LLKAGWTLNQ--QIYTSLF-----HGYIKAKMMEKAMDIL---EEMNKKNLKP 494

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEEL 671
           +++ +   +    R N  ED+  ++ E+
Sbjct: 495 DLLLYGTKIWGLCRQNEIEDSMAVIREM 522



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 90/383 (23%), Positives = 160/383 (41%), Gaps = 69/383 (18%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    + G +  A   F   +  G     + +++LI A  + G   EA  + + M++
Sbjct: 360 STLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQ 419

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVD---------------------------------FKH 282
             +  N+VTY A++D  C  G +                                   + 
Sbjct: 420 AGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEK 479

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            ++I ++M +  ++PD + + + +    R    E +  +  EM+  G+  + + Y TL+D
Sbjct: 480 AMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLID 539

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A  K  +   A  ++ EM    I   VVTY  +IDG  K G +  A+  F  M       
Sbjct: 540 AYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMT------ 593

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
                                         +G++ + + Y AL+ G  K    +E + +F
Sbjct: 594 -----------------------------RNGLQPNIMIYTALIDGLCKNDCLEEAKNLF 624

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +M    +SP+ L Y++LID   K G   EA+ +     + G++ D+  Y++LI    + 
Sbjct: 625 NEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRY 684

Query: 523 GLVESAVSLLDEMTKEGIRPNVV 545
           G V+ A SLLDEM ++GI P+ V
Sbjct: 685 GQVQLAKSLLDEMLRKGIIPDQV 707


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  213 bits (541), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 251/521 (48%), Gaps = 49/521 (9%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G    V +++ +I  + R G   +A ++F+ M +  + P++VTY++ IDA C    +D  
Sbjct: 222 GCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKA 281

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            +V     M+ NG +PD++T+N ++   S  G W+    +F EM  RG+  DIFT N+ +
Sbjct: 282 ELV--LRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYM 339

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
            ++CK  +   A E    M AK   P++VTYS ++ GYA  G + D LN+F+ M+  GI 
Sbjct: 340 SSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIV 399

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D   YN ++  Y K G  +EA+L+  +M+  G+  DA TY  ++  + + G+  +    
Sbjct: 400 ADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDK 459

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL-KADVVLYSALIDALC 520
           F QM A  + P+ + Y++LI  +   G   +A ++  E    G+ + + V ++++I++LC
Sbjct: 460 FNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLC 519

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT--VDDVERDLGKQKE-- 576
           K G V  A  + D +   G RP+V+T+NS+ID +G     E    V D    +G + +  
Sbjct: 520 KEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVV 579

Query: 577 --SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
             SA LD  C          GR D+ +I                             +F+
Sbjct: 580 TYSALLDGYCRN--------GRIDDGLI-----------------------------LFR 602

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDN 692
           +M    +KP  +T+  IL+          A  +  E+      +     G+++G   R+N
Sbjct: 603 EMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNN 662

Query: 693 IWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
              +A++LF ++  M+     A  N + D ++   ++  A 
Sbjct: 663 CDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAN 703



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 159/624 (25%), Positives = 280/624 (44%), Gaps = 76/624 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ +L+ L       +A+      VK+    +      + +I    R G+V  A N+F  
Sbjct: 193 YSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHE 252

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            + +G    V  +S+ I A  ++    +A  V   M     +P+ VTYN +I      G 
Sbjct: 253 MMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILG- 311

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAAR------------------ 319
            +K    +F +M R G+ PD  T NS + ++C  G   EAA                   
Sbjct: 312 QWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYS 371

Query: 320 ----------------NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
                           NLFN M   GI  D   YN L+DA  K   MD A  I  +M  +
Sbjct: 372 VLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQER 431

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
            + P+  TY T+I  +++ GRL DA++ F++M  +G+  D + YN+++  +   G   +A
Sbjct: 432 GVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKA 491

Query: 424 LLVCKEMESSGI-RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
             +  EM S GI R + V +N+++    K+G+  E + +F+ +      P+++T+++LID
Sbjct: 492 KELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLID 551

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            Y   G  ++A  +       G++ DVV YSAL+D  C+NG ++  + L  EM  +G++P
Sbjct: 552 GYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKP 611

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII 602
             +TY  I+                 R +G +K       MC +    + E+G T +  I
Sbjct: 612 TTITYGIILHGLFNDG----------RTVGAKK-------MCHE----MIESGTTMD--I 648

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
              G ++      G   N C  E    + +F+K+  + +K N+   + +++A  +    E
Sbjct: 649 STCGIILG-----GLCRNNCDDE---AIALFKKLGAMNVKFNIAIINTMIDAMYKVRKRE 700

Query: 663 DASMLLEELR---LFDN-QVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNA 718
           +A+ L + +    L  N   YGV    L+  ++    +A ++F  ++    + +S   N 
Sbjct: 701 EANELFDSISATGLVPNASTYGVMITNLL--KEGSVEEADNMFSLMEKSGCAPSSRLLNN 758

Query: 719 LTDMLWHFGQ--KRGAQLVVLEGK 740
           +  +L   G+  K G  L  ++GK
Sbjct: 759 IIRVLLEKGEISKAGNYLSKVDGK 782



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 225/496 (45%), Gaps = 71/496 (14%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRYNLKPNLVTYNAVIDAC 273
           +F   L  G    V   + L+     +    +A++V  + M    ++P+ ++Y+ V+ + 
Sbjct: 141 LFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSL 200

Query: 274 GKGGVDFKHVVEIFDDMLRN--GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            +     +  +++   M++   G  P+ +++N+++    R G    A NLF+EM+ +G+ 
Sbjct: 201 CEDSRS-QRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVV 259

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D+ TY++ +DA+CK   MD A  ++ +M +    P+ VTY+ MI GY+  G+  +   M
Sbjct: 260 PDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGM 319

Query: 392 FSEMKFLGI-----------------------------------GLDRVSYNTVLSIYAK 416
           F EM   G+                                     D V+Y+ +L  YA 
Sbjct: 320 FREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAA 379

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
            G   + L +   ME +GI  D   YN L+  YGK+G  DE   +F QM+   V P+  T
Sbjct: 380 EGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWT 439

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y T+I  +S+ G   +AM  F +    GLK D ++Y++LI   C +G +  A  L+ EM 
Sbjct: 440 YGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMM 499

Query: 537 KEGI-RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
             GI RPN V +NSII++  +               G+  E+ ++       D  +    
Sbjct: 500 SRGIPRPNTVFFNSIINSLCKE--------------GRVVEAQDI------FDLVIHIGE 539

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
           R D   +  F  L+      GK E           GV   M  + I+P+VVT+SA+L+  
Sbjct: 540 RPD---VITFNSLIDGYGLVGKMEKA--------FGVLDAMISVGIEPDVVTYSALLDGY 588

Query: 656 SRCNSFEDASMLLEEL 671
            R    +D  +L  E+
Sbjct: 589 CRNGRIDDGLILFREM 604



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 176/345 (51%), Gaps = 22/345 (6%)

Query: 230 AFSALISAYGR---SGYCQE----AISVFNSMKRYNLKP-----NLVTYNAVIDACGKG- 276
           A +  ++A  R   S  C++    A+++FN + R   +P      + TYN ++D C +  
Sbjct: 74  ALNGFLTALARAPSSATCRDGPSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRAH 133

Query: 277 --GVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQD 333
              V F     +F   L+ G++ D I  N LL  +C      +A   L + M   G++ D
Sbjct: 134 RPTVGFA----LFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPD 189

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKN--ISPNVVTYSTMIDGYAKAGRLDDALNM 391
             +Y+T+L ++C+ ++   A +++  M  K+   SPNVV+Y+T+I G+ + G +  A N+
Sbjct: 190 TISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNL 249

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F EM   G+  D V+Y++ +    K    ++A LV ++M S+G   D VTYN ++ GY  
Sbjct: 250 FHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSI 309

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G++ E   MF +M    + P++ T ++ +    K G  KEA + F      G K D+V 
Sbjct: 310 LGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVT 369

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           YS L+      G V   ++L + M   GI  +   YN +IDA+G+
Sbjct: 370 YSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGK 414



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 155/312 (49%), Gaps = 10/312 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I+ L + G+V  A++IF+  ++ G    V  F++LI  YG  G  ++A  V ++M  
Sbjct: 512 NSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMIS 571

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             ++P++VTY+A++D  C  G +D   +  +F +ML  GV+P  IT+  +L      G  
Sbjct: 572 VGIEPDVVTYSALLDGYCRNGRIDDGLI--LFREMLSKGVKPTTITYGIILHGLFNDGRT 629

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A+ + +EM+  G   DI T   +L  +C+    D A  +  ++ A N+  N+   +TM
Sbjct: 630 VGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTM 689

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID   K  + ++A  +F  +   G+  +  +Y  +++   K G  EEA  +   ME SG 
Sbjct: 690 IDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGC 749

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM- 494
              +   N ++    ++G+  +      ++    +S    T S ++ ++S+ G Y+E + 
Sbjct: 750 APSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIK 809

Query: 495 ------QIFREF 500
                 Q F EF
Sbjct: 810 SLPAMYQFFDEF 821



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 96/412 (23%), Positives = 168/412 (40%), Gaps = 47/412 (11%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN-------LFNEMVH-----RGIDQD 333
           +FD++LR          N  L   +R       R+       LFN +       R     
Sbjct: 59  LFDELLRQTTPVPERALNGFLTALARAPSSATCRDGPSLAVALFNRICREEARPRVALPT 118

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN-MF 392
           + TYN L+D  C+  +  + F +        +  +V+  + ++     A R DDA+N + 
Sbjct: 119 VCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLL 178

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM--ESSGIRKDAVTYNALLGGYG 450
             M  LG+  D +SY+TVL    +  R + AL +   M  +S G   + V+YN ++ G+ 
Sbjct: 179 HRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFF 238

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           ++G+  +   +F +M    V P+++TYS+ ID   K     +A  + R+    G + D V
Sbjct: 239 REGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKV 298

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y+ +I      G  +    +  EMT+ G+ P++ T NS + +  +              
Sbjct: 299 TYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKH------------- 345

Query: 571 LGKQKESAN-LDAMCSQDDK------DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
            GK KE+A   D+M ++  K       V   G      +     L     G G   +   
Sbjct: 346 -GKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSV 404

Query: 624 QEILC-----------ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
             IL             + +F +M +  + P+  T+  ++ A SR     DA
Sbjct: 405 YNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADA 456



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 77/350 (22%), Positives = 151/350 (43%), Gaps = 36/350 (10%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE-VRRMFEQ 464
           +YN ++    +  R      +      +G++ D +  N LL       + D+ V  +  +
Sbjct: 121 TYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHR 180

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF--KQAGLKADVVLYSALIDALCKN 522
           M    V P+ ++YST++    +    + A+ +      K  G   +VV Y+ +I    + 
Sbjct: 181 MPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFRE 240

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           G V  A +L  EM ++G+ P+VVTY+S IDA  ++      +D  E  L +Q  S     
Sbjct: 241 GEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARA----MDKAELVL-RQMISNGF-- 293

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
              + DK       T N +I  +  L     GQ K+            G+F++M +  + 
Sbjct: 294 ---EPDK------VTYNCMIHGYSIL-----GQWKETA----------GMFREMTRRGLM 329

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GYR-DNIWVQALSL 700
           P++ T ++ +++  +    ++A+   + +    ++   V + +L+ GY  +   V  L+L
Sbjct: 330 PDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNL 389

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
           F+ ++        + YN L D     G    A L+  + + R V  + W+
Sbjct: 390 FNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWT 439


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  213 bits (541), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 262/552 (47%), Gaps = 50/552 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++S + ++ K D+  ++ E   N G  +  Y +S L++ + R      A++V   M +
Sbjct: 85  SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMK 144

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +P++VT +++++    G       V + D M+  G +PD +TFN+L+          
Sbjct: 145 LGYEPDIVTLSSLLNGYCHGK-RISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS 203

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L + MV RG   D+FTY T+++ +CK   +DLA  ++ +M    I  NVV Y+T+I
Sbjct: 204 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTII 263

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  K   +DDA ++F++M+  GI  D  +YN+++S     GR+ +A  +  +M    I 
Sbjct: 264 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + VT+N+L+  + K+GK  E  ++F++M    + PN++TY++LI+ +       EA QI
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F          DVV Y+ LI   CK   VE  + L  EM++ G+  N VTYN++I    +
Sbjct: 384 FTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 443

Query: 557 SATTEC--------TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
           +   +           D V  D+     S  LD +C                    +G+L
Sbjct: 444 AGDCDMAQKIFKKMVSDGVPPDI--ITYSILLDGLCK-------------------YGKL 482

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
             EKA                L VF+ + K K++PN+ T++ ++    +    ED   L 
Sbjct: 483 --EKA----------------LVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLF 524

Query: 669 EELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHF 726
             L L   +   + +  ++ G+ R  +  +A +LF E+K   +   S  YN L       
Sbjct: 525 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRD 584

Query: 727 GQKRGAQLVVLE 738
           G K  +  ++ E
Sbjct: 585 GDKAASAELIKE 596



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 145/540 (26%), Positives = 256/540 (47%), Gaps = 56/540 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +++   R  ++ LA  +    +  GY   +   S+L++ Y       EA+++ + M  
Sbjct: 120 SILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVE 179

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKH-----VVEIFDDMLRNGVQPDRITFNSLL-AVCS 310
              KP+ VT+N +I         F H      V + D M+  G QPD  T+ +++  +C 
Sbjct: 180 MGYKPDTVTFNTLIHGL------FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 233

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           RG + + A +L  +M    I+ ++  YNT++D +CK   MD AF++  +M  K I P+V 
Sbjct: 234 RGDI-DLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 292

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TY+++I      GR  DA  + S+M    I  + V++N+++  +AK G+  EA  +  EM
Sbjct: 293 TYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 352

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA-DCVSPNLLTYSTLIDVYSKGGL 489
               I  + VTYN+L+ G+    + DE +++F  M + DC+ P+++TY+TLI  + K   
Sbjct: 353 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL-PDVVTYNTLIKGFCKAKR 411

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
            +E M++FRE  Q GL  + V Y+ LI  L + G  + A  +  +M  +G+ P+++TY+ 
Sbjct: 412 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 471

Query: 550 IIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
           ++D   +    E  +   E  L K K   N                      I  +  ++
Sbjct: 472 LLDGLCKYGKLEKALVVFEY-LQKSKMEPN----------------------IYTYNIMI 508

Query: 610 AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
                 GK E+    ++ C L +        +KPNV+ ++ +++   R    E+A  L  
Sbjct: 509 EGMCKAGKVED--GWDLFCSLSL------KGVKPNVIIYTTMISGFCRKGLKEEADALFR 560

Query: 670 ELR----LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVK----LMDSSTASAFYNALTD 721
           E++    L D+  Y     +    RD     +  L  E++    + D+ST S   N L D
Sbjct: 561 EMKEDGTLPDSGCYNTL--IRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 618



 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 214/408 (52%), Gaps = 19/408 (4%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMI---SILGRLGK 208
           C  D +T+  ++  L  RG+   A+           +K ++GK+ + ++   +I+  L K
Sbjct: 217 CQPDLFTYGTVVNGLCKRGDIDLALSLL--------KKMEKGKIEANVVIYNTIIDGLCK 268

Query: 209 ---VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
              +D A ++F     +G    V+ +++LIS     G   +A  + + M    + PN+VT
Sbjct: 269 YKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 328

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNE 324
           +N++IDA  K G       ++FD+M++  + P+ +T+NSL+   C    L EA + +F  
Sbjct: 329 FNSLIDAFAKEG-KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA-QQIFTL 386

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           MV +    D+ TYNTL+   CK  +++   E+  EM  + +  N VTY+T+I G  +AG 
Sbjct: 387 MVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 446

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
            D A  +F +M   G+  D ++Y+ +L    K G+ E+AL+V + ++ S +  +  TYN 
Sbjct: 447 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNI 506

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++ G  K GK ++   +F  +    V PN++ Y+T+I  + + GL +EA  +FRE K+ G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 566

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
              D   Y+ LI A  ++G   ++  L+ EM   G   +  T + +I+
Sbjct: 567 TLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 614



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 206/429 (48%), Gaps = 41/429 (9%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           V +F +M+++   P  I F+ LL+  ++   ++   +L  +M + GI  + +TY+ LL+ 
Sbjct: 66  VALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNC 125

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C+ +Q+ LA  ++ +M      P++VT S++++GY    R+ +A+ +  +M  +G   D
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPD 185

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V++NT++       +  EA+ +   M + G + D  TY  ++ G  K+G  D    + +
Sbjct: 186 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 245

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M+   +  N++ Y+T+ID   K     +A  +F + +  G+K DV  Y++LI  LC  G
Sbjct: 246 KMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYG 305

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDD-VERDLGKQKESAN 579
               A  LL +M +  I PNVVT+NS+IDAF   G+    E   D+ ++R +     + N
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 365

Query: 580 --LDAMCSQD-------------DKDVQEAGRTDNQIIKVFG---------QLVAEKAGQ 615
             ++  C  D              KD      T N +IK F          +L  E + +
Sbjct: 366 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQR 425

Query: 616 GKKENRCRQEILCILGVFQ------------KMHKLKIKPNVVTFSAILNACSRCNSFED 663
           G   N      L I G+FQ            KM    + P+++T+S +L+   +    E 
Sbjct: 426 GLVGNTVTYNTL-IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 484

Query: 664 ASMLLEELR 672
           A ++ E L+
Sbjct: 485 ALVVFEYLQ 493



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 170/337 (50%), Gaps = 3/337 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++IS L   G+   A  +    +       V  F++LI A+ + G   EA  +F+ M +
Sbjct: 295 NSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 354

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            ++ PN+VTYN++I+  C    +D     +IF  M+     PD +T+N+L+    +    
Sbjct: 355 RSIDPNIVTYNSLINGFCMHDRLD--EAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRV 412

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E    LF EM  RG+  +  TYNTL+  + +    D+A +I  +M +  + P+++TYS +
Sbjct: 413 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 472

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +DG  K G+L+ AL +F  ++   +  +  +YN ++    K G+ E+   +   +   G+
Sbjct: 473 LDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + + Y  ++ G+ ++G  +E   +F +MK D   P+   Y+TLI    + G    + +
Sbjct: 533 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAE 592

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           + +E +  G   D    S +I+ L    L +S + +L
Sbjct: 593 LIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 629


>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
 gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
 gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
 gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 258/528 (48%), Gaps = 20/528 (3%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREER---KNDQGKLASAMISILGRLGKVDLAKN 214
           D   L++ L + G W +A+  F + V        K D  ++    + ILGR  +  +A  
Sbjct: 138 DLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDH-QVIEIFVRILGRESQYSVAAK 196

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           + +    + Y   V A++ ++ AY R+G  ++AI +F  MK     P LVTYN ++D  G
Sbjct: 197 LLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFG 256

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K G  ++ ++ + D+M   G++ D  T +++L+ C+R GL   A+  F E+   G +   
Sbjct: 257 KMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGT 316

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TYN LL    K      A  ++ EM   +   + VTY+ ++  Y +AG   +A  +   
Sbjct: 317 VTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEM 376

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G+  + ++Y TV+  Y K G+ +EAL +   M+ +G   +  TYNA+L   GK+ +
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            +E+ +M   MK++  SPN  T++T++ +    G+ K   ++FRE K  G + D   ++ 
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 496

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA---TTECTVDDVERDL 571
           LI A  + G    A  +  EMT+ G    V TYN++++A  R     + E  + D++   
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556

Query: 572 GKQKESA-NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK---KENRCRQEIL 627
            K  E++ +L   C     +     R +N+I +  GQ+               +CR    
Sbjct: 557 FKPTETSYSLMLQCYAKGGNYLGIERIENRIKE--GQIFPSWMLLRTLLLANFKCR---- 610

Query: 628 CILG---VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            + G    F    K   KP++V F+++L+  +R N ++ A  +LE +R
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 658



 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 222/448 (49%), Gaps = 50/448 (11%)

Query: 150 EFKLCGAD----DYTFLLRELGNRGEWSKAIQCFAFAVKREERKND---QGKLASAMISI 202
           E K CG +     Y  LL+  G  G +++A+     +V +E  +N         + +++ 
Sbjct: 306 ELKSCGYEPGTVTYNALLQVFGKAGVYTEAL-----SVLKEMEENSCPADSVTYNELVAA 360

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
             R G    A  + E    +G       ++ +I AYG++G   EA+ +F SMK     PN
Sbjct: 361 YVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN 420

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
             TYNAV+   GK       ++++  DM  NG  P+R T+N++LA+C   G+ +    +F
Sbjct: 421 TCTYNAVLSLLGKKSRS-NEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF 479

Query: 323 NEMVHRGIDQDIFTYNTLLDAICK-GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            EM   G + D  T+NTL+ A  + G+++D A ++  EM     +  V TY+ +++  A+
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVD-ASKMYGEMTRAGFNACVTTYNALLNALAR 538

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG----------RFEEALLV----- 426
            G      N+ S+MK  G      SY+ +L  YAK G          R +E  +      
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWML 598

Query: 427 ----------CKEMESS----------GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
                     C+ +  S          G + D V +N++L  + +   YD+   + E ++
Sbjct: 599 LRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 658

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            D +SP+L+TY++L+D+Y + G   +A +I +  +++ LK D+V Y+ +I   C+ GL++
Sbjct: 659 EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQ 718

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            AV +L EMT+ GIRP + TYN+ +  +
Sbjct: 719 EAVRMLSEMTERGIRPCIFTYNTFVSGY 746



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 133/532 (25%), Positives = 241/532 (45%), Gaps = 68/532 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++S   R G +  AK  F    + GY      ++AL+  +G++G   EA+SV   M+ 
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            +   + VTYN ++ A  + G   K    + + M + GV P+ IT+ +++    + G  +
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFS-KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF  M   G   +  TYN +L  + K ++ +   +++ +M +   SPN  T++TM+
Sbjct: 404 EALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463

Query: 377 DGYAKAGRLDDALN-MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
                 G +D  +N +F EMK  G   DR ++NT++S Y + G   +A  +  EM  +G 
Sbjct: 464 ALCGNKG-MDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY----- 490
                TYNALL    ++G +     +   MK+    P   +YS ++  Y+KGG Y     
Sbjct: 523 NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIER 582

Query: 491 -----KEAMQIFRE--------------------------FKQAGLKADVVLYSALIDAL 519
                KE  QIF                            FK+ G K D+V++++++   
Sbjct: 583 IENRIKEG-QIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 641

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC-TVDDVERDLGKQKESA 578
            +N + + A  +L+ + ++G+ P++VTYNS++D + R    EC   +++ + L K +   
Sbjct: 642 TRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG--ECWKAEEILKTLEKSQLKP 699

Query: 579 NL-------DAMCSQDDKDVQEAGRTDNQI--------IKVFGQLVAEKAGQGKKENRCR 623
           +L          C +    +QEA R  +++        I  +   V+     G       
Sbjct: 700 DLVSYNTVIKGFCRRG--LMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAE--- 754

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 675
                I  V + M K   +PN +TF  +++   R   + +A   + +++ FD
Sbjct: 755 -----IEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFD 801



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 210/462 (45%), Gaps = 40/462 (8%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +LK+ E   C AD  T+  L+      G   +A        K+    N      + +I  
Sbjct: 338 VLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN--AITYTTVIDA 395

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
            G+ GK D A  +F +    G       ++A++S  G+     E I +   MK     PN
Sbjct: 396 YGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPN 455

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
             T+N ++  CG  G+D K V  +F +M   G +PDR TFN+L++   R G    A  ++
Sbjct: 456 RATWNTMLALCGNKGMD-KFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMY 514

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            EM   G +  + TYN LL+A+ +         ++++M +K   P   +YS M+  YAK 
Sbjct: 515 GEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKG 574

Query: 383 G------RLDDALN-----------------------------MFSEMKFLGIGLDRVSY 407
           G      R+++ +                               F+  K  G   D V +
Sbjct: 575 GNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIF 634

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N++LSI+ +   +++A  + + +   G+  D VTYN+L+  Y ++G+  +   + + ++ 
Sbjct: 635 NSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEK 694

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + P+L++Y+T+I  + + GL +EA+++  E  + G++  +  Y+  +      G+   
Sbjct: 695 SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAE 754

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
              +++ M K   RPN +T+  ++D + R+      +D V +
Sbjct: 755 IEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSK 796



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 190/426 (44%), Gaps = 40/426 (9%)

Query: 251 FNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML----RNGVQPDRITFNSLL 306
           F+S+K   L+ +LV+    +D  G     ++  V +F+ ++       ++ D       +
Sbjct: 127 FDSVKSELLRTDLVSLVKGLDDSGH----WERAVFLFEWLVLSSNSGALKLDHQVIEIFV 182

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
            +  R   +  A  L +++  +    D+  Y T+L A  +  + + A ++   M     S
Sbjct: 183 RILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPS 242

Query: 367 PNVVTYSTMIDGYAKAGR-LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           P +VTY+ ++D + K GR     L +  EM+  G+  D  + +TVLS  A+ G   EA  
Sbjct: 243 PTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKE 302

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
              E++S G     VTYNALL  +GK G Y E   + ++M+ +    + +TY+ L+  Y 
Sbjct: 303 FFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYV 362

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           + G  KEA  +     + G+  + + Y+ +IDA  K G  + A+ L   M + G  PN  
Sbjct: 363 RAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTC 422

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
           TYN+++   G+                K + +  +  +C            T N ++ + 
Sbjct: 423 TYNAVLSLLGK----------------KSRSNEMIKMLCDMKSNGCSPNRATWNTMLALC 466

Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
           G       G  K  NR          VF++M     +P+  TF+ +++A  RC S  DAS
Sbjct: 467 GN-----KGMDKFVNR----------VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDAS 511

Query: 666 MLLEEL 671
            +  E+
Sbjct: 512 KMYGEM 517



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 77/356 (21%), Positives = 139/356 (39%), Gaps = 52/356 (14%)

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           L +  D  S   +L I  +  R     L+CK        K+ V  N+++     +     
Sbjct: 76  LEVSTDSSSSKPILGIEIENERNGSLKLLCK--------KEVVLVNSIV-----EQPLTG 122

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF----KQAGLKADVVLYS 513
           + R F+ +K++ +  +L++   L+      G ++ A+ +F           LK D  +  
Sbjct: 123 LSRFFDSVKSELLRTDLVS---LVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIE 179

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
             +  L +      A  LLD++  +    +V  Y +I+ A+ R+   E  +D  ER    
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFER---- 235

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
            KE      +             T N I+ VFG     K G+  ++         ILGV 
Sbjct: 236 MKEMGPSPTLV------------TYNVILDVFG-----KMGRSWRK---------ILGVL 269

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RD 691
            +M    +K +  T S +L+AC+R     +A     EL+    +   V +  L+    + 
Sbjct: 270 DEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKA 329

Query: 692 NIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN 747
            ++ +ALS+  E++       S  YN L       G  + A  V+    ++ V  N
Sbjct: 330 GVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN 385


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 222/434 (51%), Gaps = 36/434 (8%)

Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC--GKGGVDFK 281
           Y ++   F  ++ +Y       +A++  N  K     P +++YN+V+DA    +G V   
Sbjct: 138 YNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLS 197

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
              E++ +M+R+ V P+  T+N L+   CS G L +     F EM   G   ++ TYNTL
Sbjct: 198 -AEEVYREMIRSRVSPNVYTYNILIRGFCSVGEL-QKGLGCFGEMERNGCLPNVVTYNTL 255

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +DA CK  ++D AF ++  M +K + PN+++Y+ +I+G  + G + +A  +  EM + G 
Sbjct: 256 IDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGF 315

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D V+YNT+L+ Y K G F +AL++  EM  +G+    VTY AL+    K    +    
Sbjct: 316 TPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAME 375

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
            F+QM+   + PN  TY+TLID +S+ GL  EA +I  E  ++G    VV Y+A I   C
Sbjct: 376 FFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHC 435

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
               +E A+ ++ EM ++G+ P+VV+Y++II  F       C   +++R    ++E    
Sbjct: 436 VLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF-------CRKGELDRAFQMKQEMV-- 486

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
                  +K V     T + +I            QG  E R R    C L   Q+M  + 
Sbjct: 487 -------EKGVSPDAVTYSSLI------------QGLCEMR-RLTEACDLS--QEMLDMG 524

Query: 641 IKPNVVTFSAILNA 654
           + P+  T++ ++NA
Sbjct: 525 LPPDEFTYTTLINA 538



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 181/333 (54%), Gaps = 1/333 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  ++ LI AY + G   EA  +  SM    ++PNL++YN +I+   + G   K   EI 
Sbjct: 249 VVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREG-SMKEAWEIL 307

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           ++M   G  PD +T+N+LL    + G +  A  +  EMV  G+   + TY  L++++CK 
Sbjct: 308 EEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA 367

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             ++ A E   +M  + + PN  TY+T+IDG+++ G L++A  + +EM   G     V+Y
Sbjct: 368 RNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 427

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N  +  +  L R EEAL V +EM   G+  D V+Y+ ++ G+ ++G+ D   +M ++M  
Sbjct: 428 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 487

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             VSP+ +TYS+LI    +     EA  + +E    GL  D   Y+ LI+A C  G +  
Sbjct: 488 KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNK 547

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           A+ L DEM  +G  P+ VTY+ +I+   + A T
Sbjct: 548 ALHLHDEMIHKGFLPDAVTYSVLINGLNKQART 580



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 200/396 (50%), Gaps = 7/396 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           Y  L+R   + GE  K + CF       ER      + +   +I    ++G++D A  + 
Sbjct: 217 YNILIRGFCSVGELQKGLGCFG----EMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLL 272

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           ++  ++G    + +++ +I+   R G  +EA  +   M      P+ VTYN +++   K 
Sbjct: 273 KSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE 332

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G +F   + I  +M+RNGV P  +T+ +L+    +      A   F++M  RG+  +  T
Sbjct: 333 G-NFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 391

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y TL+D   +   ++ A+ I+ EM     SP+VVTY+  I G+    R+++AL +  EM 
Sbjct: 392 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 451

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  D VSY+T++S + + G  + A  + +EM   G+  DAVTY++L+ G  +  +  
Sbjct: 452 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 511

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E   + ++M    + P+  TY+TLI+ Y   G   +A+ +  E    G   D V YS LI
Sbjct: 512 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 571

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           + L K      A  LL ++  E   P+ VTY+++I+
Sbjct: 572 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 607



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 147/320 (45%), Gaps = 41/320 (12%)

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK-QGKYD-EVRRMFEQ 464
           ++ ++  Y+ L   ++A+      +SSG     ++YN++L    + +G        ++ +
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    VSPN+ TY+ LI  +   G  ++ +  F E ++ G   +VV Y+ LIDA CK G 
Sbjct: 205 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 264

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           ++ A  LL  M+ +G++PN+++YN II+   R               G  KE+  +    
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCRE--------------GSMKEAWEIL--- 307

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
               +++   G T +++   +  L+     +G             L +  +M +  + P+
Sbjct: 308 ----EEMGYKGFTPDEV--TYNTLLNGYCKEGNFHQA--------LVIHAEMVRNGVSPS 353

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYGVAHGLLMGY-RDNIWVQALS 699
           VVT++A++N+  +  +   A    +++R+     + + Y     L+ G+ R  +  +A  
Sbjct: 354 VVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT---LIDGFSRQGLLNEAYR 410

Query: 700 LFDEVKLMDSSTASAFYNAL 719
           + +E+     S +   YNA 
Sbjct: 411 ILNEMTESGFSPSVVTYNAF 430



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 107/239 (44%), Gaps = 48/239 (20%)

Query: 513 SALIDALCKN----GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS-ATTECTVDDV 567
           SA+ D + K+     +++ AV+ ++     G  P V++YNS++DA  RS  + + + ++V
Sbjct: 142 SAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEV 201

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG----KKENRCR 623
            R++ + + S N+                T N +I+ F  +   + G G     + N C 
Sbjct: 202 YREMIRSRVSPNV---------------YTYNILIRGFCSVGELQKGLGCFGEMERNGCL 246

Query: 624 QEILCI----------------LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
             ++                   G+ + M    ++PN+++++ I+N   R  S ++A  +
Sbjct: 247 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEI 306

Query: 668 LEEL--RLF--DNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
           LEE+  + F  D   Y     LL GY ++  + QAL +  E+     S +   Y AL +
Sbjct: 307 LEEMGYKGFTPDEVTYNT---LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALIN 362


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  212 bits (540), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 210/409 (51%), Gaps = 17/409 (4%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKVDLA 212
           D +T+  L+  L   G+   A+      ++  E+ + Q  L   SA+I  L + G V  A
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALH----LLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDA 214

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
             +       G       +++LI      G  QE   +   M R N+ P+  T+N +IDA
Sbjct: 215 LGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDA 274

Query: 273 CGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHR 328
             K G     ++E   +   M + G +PD +T+N+L+   CSR  + EA R LFN MV R
Sbjct: 275 LCKEG----RILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEA-RELFNRMVKR 329

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G++ D+  YN L+D  CK   +D A  +  E+  KN+ P + +Y+++IDG   +GR+   
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             +  EM       D V+YN ++    K GR  EAL V   M   G++ + VTYNA++ G
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           Y  +   +  + +F +M    + P++L Y+ LI+ Y K  +  EA+ +F+E +   L  D
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           +  Y++LID LC  G +     LLDEM   G  P+V+TYN ++DAF ++
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKT 558



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 230/479 (48%), Gaps = 36/479 (7%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           KL  A++    R+G    A ++F    ++G   ++  F+ LI+ Y    +   A S+  +
Sbjct: 60  KLLGAIV----RMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLAT 115

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           + +   +PNLVT+N +I+     G+ FK  ++   ++L  G   D+ T+ +L+   S+ G
Sbjct: 116 ILKSGYQPNLVTFNTIINGFCINGMIFK-ALDFCQNLLAQGYLFDQFTYGTLINGLSKNG 174

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             +AA +L  EM    +  ++  Y+ L+D +CK   +  A  + +++  + I  + VTY+
Sbjct: 175 QIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYN 234

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           ++IDG    GR  +   + ++M    +  D  ++N ++    K GR  EA  V   M   
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKR 294

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G + D VTYNAL+ GY  +    E R +F +M    + P++L Y+ LID Y K  +  EA
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEA 354

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           M +F+E     L   +  Y++LID LC +G +     LLDEM      P+VVTYN +IDA
Sbjct: 355 MVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDA 414

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
             +               G+  E+  +  M  +  K V+    T N ++   G  +    
Sbjct: 415 LCKE--------------GRILEALGVLVMMMK--KGVKPNIVTYNAMMD--GYCLRNNV 456

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              K              +F +M K  ++P+++ ++ ++N   +    ++A +L +E+R
Sbjct: 457 NVAKD-------------IFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMR 502



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 198/409 (48%), Gaps = 10/409 (2%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           DDYTF  L+  L   G   +A    A   KR E K D     + M     R   V  A+ 
Sbjct: 264 DDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNALMEGYCSR-ENVHEARE 321

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-C 273
           +F   +  G    V  ++ LI  Y ++    EA+ +F  +   NL P + +YN++ID  C
Sbjct: 322 LFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLC 381

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQ 332
             G +   HV ++ D+M  +   PD +T+N L+ A+C  G + EA   L   M+ +G+  
Sbjct: 382 NSGRI--SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLV-MMMKKGVKP 438

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           +I TYN ++D  C    +++A +I   M    + P+++ Y+ +I+GY K   +D+A+ +F
Sbjct: 439 NIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLF 498

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            EM+   +  D  SYN+++     LGR      +  EM  SG   D +TYN LL  + K 
Sbjct: 499 KEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKT 558

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
             +D+   +F Q+  + + P+  T   ++D   KG   K A    +     G   +V  Y
Sbjct: 559 QPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTY 617

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + LI+ALCK+G    A+ LL +M      P+ +T+  II    +   T+
Sbjct: 618 TILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETD 666



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 200/408 (49%), Gaps = 6/408 (1%)

Query: 153 LCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLA 212
           L  A  Y  L+    + G W +  Q     V+     +D     + +I  L + G++  A
Sbjct: 227 LLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT--FNILIDALCKEGRILEA 284

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
           + +       G    +  ++AL+  Y       EA  +FN M +  L+P+++ YN +ID 
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344

Query: 273 -CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            C    VD   V  +F ++    + P   ++NSL+      G     + L +EM      
Sbjct: 345 YCKTKMVDEAMV--LFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D+ TYN L+DA+CK  ++  A  ++  M  K + PN+VTY+ M+DGY     ++ A ++
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F+ M   G+  D ++YN +++ Y K    +EA+++ KEM    +  D  +YN+L+ G   
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G+   V+ + ++M     SP+++TY+ L+D + K   + +A+ +FR+  + G+  D   
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYT 581

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             A++D LCK   ++ A   L  +   G  PNV TY  +I+A  +  +
Sbjct: 582 NHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGS 629



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 232/496 (46%), Gaps = 21/496 (4%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +A++ FN M R    P    ++ ++ A  + G  +   + +F  +   G+ P   TF  L
Sbjct: 38  DAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMG-HYPTAISLFTQLQSKGISPSIATFTIL 96

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +           A +L   ++  G   ++ T+NT+++  C    +  A +    + A+  
Sbjct: 97  INCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGY 156

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
             +  TY T+I+G +K G++  AL++  EM+   +  + V Y+ ++    K G   +AL 
Sbjct: 157 LFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALG 216

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           +C ++   GI  DAVTYN+L+ G    G++ EV ++  +M  + V P+  T++ LID   
Sbjct: 217 LCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALC 276

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G   EA  +     + G K D+V Y+AL++  C    V  A  L + M K G+ P+V+
Sbjct: 277 KEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVL 336

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
            YN +ID +       C    V+  +   KE  N + + +    +    G  ++  I   
Sbjct: 337 NYNVLIDGY-------CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389

Query: 606 GQLVAEKAGQGKKEN----------RCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNA 654
            +L+ E  G  +  +           C++  IL  LGV   M K  +KPN+VT++A+++ 
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449

Query: 655 CSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTA 712
               N+   A  +   +     +   + + +L+ GY +  +  +A+ LF E++  +    
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509

Query: 713 SAFYNALTDMLWHFGQ 728
            A YN+L D L + G+
Sbjct: 510 IASYNSLIDGLCNLGR 525



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 150/306 (49%), Gaps = 37/306 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  L   G++   K + +          V  ++ LI A  + G   EA+ V   M +
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             +KPN+VTYNA++D  C +  V+     +IF+ M+++G++PD + +N L+    +  + 
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAK--DIFNRMVKSGLEPDILNYNVLINGYCKTEMV 491

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  LF EM H+ +  DI +YN+L+D +C   ++    E++ EM     SP+V+TY+ +
Sbjct: 492 DEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNIL 551

Query: 376 IDGYAKAGRLDDALNMFSE-------------------------------MKFL---GIG 401
           +D + K    D A+++F +                               +K L   G  
Sbjct: 552 LDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCS 611

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            +  +Y  +++   K G F EA+L+  +ME +    DA+T+  ++G   ++ + D+  ++
Sbjct: 612 PNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKL 671

Query: 462 FEQMKA 467
            E+M A
Sbjct: 672 REEMIA 677



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 143/278 (51%), Gaps = 6/278 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   G   +A+      +K+  + N      +AM+        V++AK+IF  
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT--YNAMMDGYCLRNNVNVAKDIFNR 465

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +  G    +  ++ LI+ Y ++    EAI +F  M+  NL P++ +YN++ID  C  G 
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +   HV E+ D+M  +G  PD IT+N LL    +   ++ A +LF ++V  GI  D +T 
Sbjct: 526 I--PHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTN 582

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           + ++D +CKG ++ +A + +  +     SPNV TY+ +I+   K G   +A+ + S+M+ 
Sbjct: 583 HAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMED 642

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
                D +++  ++ +  +    ++A  + +EM + G+
Sbjct: 643 NDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 203/357 (56%), Gaps = 7/357 (1%)

Query: 208  KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
            K   A  + +  + +G    +  +  +++   + G    A ++ N M++  L+P ++ YN
Sbjct: 815  KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 874

Query: 268  AVIDACGKGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
             +ID    G   +KH+   + +F +M   G++P+ +T++SL++     G W  A  L ++
Sbjct: 875  TIID----GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 930

Query: 325  MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
            M+ R I+ D+FT++ L+DA  K  ++  A ++  EM  ++I P++VTYS++I+G+    R
Sbjct: 931  MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 990

Query: 385  LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
            LD+A  MF  M       D V+YNT++  + K  R EE + V +EM   G+  + VTYN 
Sbjct: 991  LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 1050

Query: 445  LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
            L+ G  + G  D  + +F++M +D V PN++TY+TL+D   K G  ++AM +F   +++ 
Sbjct: 1051 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 1110

Query: 505  LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            ++  +  Y+ +I+ +CK G VE    L   ++ +G++P+VV YN++I  F R  + E
Sbjct: 1111 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 1167



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 254/504 (50%), Gaps = 41/504 (8%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           +V LA +I    L  GY        +L++ + R     +A+S+ + M     KP++V YN
Sbjct: 238 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 297

Query: 268 AVIDACGKGGVDFKHVVEIFD---DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           A+ID+  K     K V + FD   ++ R G++P+ +T+ +L+        W  A  L ++
Sbjct: 298 AIIDSLCKT----KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 353

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+ + I  ++ TY+ LLDA  K  ++  A E+  EM   +I P++VTYS++I+G     R
Sbjct: 354 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 413

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +D+A  MF  M   G   D VSYNT+++ + K  R E+ + + +EM   G+  + VTYN 
Sbjct: 414 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 473

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G+ + G  D+ +  F QM    +SP++ TY+ L+      G  ++A+ IF + ++  
Sbjct: 474 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 533

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           +  D+V Y+ +I  +CK G VE A SL   ++ +G++P++VTY +++        T+  +
Sbjct: 534 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL----CTKGLL 589

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ---------IIKVFGQLVAEK--- 612
            +VE    K K+   +   C+  D D+  +     +         ++K     V +K   
Sbjct: 590 HEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALS 649

Query: 613 ---AGQGKKENRCRQEI----LCIL------GVFQKMHKLKIKPNVVTFSAILNACSRCN 659
              A  GK     R+++    L  L       +F +M K +  P+++ FS +L+A ++ N
Sbjct: 650 LLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMN 709

Query: 660 SFEDASMLLEELRLFDNQVYGVAH 683
            F+    L E++     Q  G+ H
Sbjct: 710 KFDVVISLGEQM-----QNLGIPH 728



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 143/545 (26%), Positives = 256/545 (46%), Gaps = 36/545 (6%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            S ++S + ++ K D+  ++ E   N G  +  Y +S LI+ + R      A++V   M +
Sbjct: 699  SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 758

Query: 257  YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               +PN+VT +++++  C    +     V + D M   G QP+ +TFN+L+         
Sbjct: 759  LGYEPNIVTLSSLLNGYCHSKRI--SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 816

Query: 316  EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
              A  L + MV +G   D+ TY  +++ +CK    DLAF ++ +M    + P V+ Y+T+
Sbjct: 817  SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 876

Query: 376  IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
            IDG  K   +DDALN+F EM+  GI  + V+Y++++S     GR+ +A  +  +M    I
Sbjct: 877  IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 936

Query: 436  RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
              D  T++AL+  + K+GK  E  +++++M    + P+++TYS+LI+ +       EA Q
Sbjct: 937  NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 996

Query: 496  IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            +F          DVV Y+ LI   CK   VE  + +  EM++ G+  N VTYN +I    
Sbjct: 997  MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 1056

Query: 556  RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
            ++   +                     M  +  K++   G   N  I  +  L+      
Sbjct: 1057 QAGDCD---------------------MAQEIFKEMVSDGVPPN--IMTYNTLLDGLCKN 1093

Query: 616  GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 675
            GK E          + VF+ + + K++P + T++ ++    +    ED   L   L L  
Sbjct: 1094 GKLEKA--------MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 1145

Query: 676  NQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
             +   VA+  ++ G+ R     +A +LF E+K   +   S  YN L       G +  + 
Sbjct: 1146 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 1205

Query: 734  LVVLE 738
             ++ E
Sbjct: 1206 ELIKE 1210



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/566 (25%), Positives = 256/566 (45%), Gaps = 94/566 (16%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I  L +  +V+ A + F+    +G    V  ++AL++    S    +A  + + M +
Sbjct: 297 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 356

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN++TY+A++DA  K G       E+F++M+R  + PD +T++SL+         +
Sbjct: 357 KKITPNVITYSALLDAFVKNG-KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 415

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +F+ MV +G   D+ +YNTL++  CK  +++   ++  EM  + +  N VTY+T+I
Sbjct: 416 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 475

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+ +AG +D A   FS+M F GI  D  +YN +L      G  E+AL++ ++M+   + 
Sbjct: 476 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 535

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTY  ++ G  K GK +E   +F  +    + P+++TY+T++      GL  E   +
Sbjct: 536 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 595

Query: 497 FREFKQAGL--------KADVVLYSALI-------------------------------- 516
           + + KQ GL          D+ L + LI                                
Sbjct: 596 YTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFS 655

Query: 517 --------DALCKNGLVE----SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
                   + L +NGL E     AV+L  EM K    P+++ ++ ++ A  +        
Sbjct: 656 GKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKF---- 711

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
            DV   LG+Q ++             +     T + +I  F                CR+
Sbjct: 712 -DVVISLGEQMQNLG-----------IPHNHYTYSILINCF----------------CRR 743

Query: 625 EILCI-LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA- 682
             L + L V  KM KL  +PN+VT S++LN         +A  L++++ +   Q   V  
Sbjct: 744 SQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF 803

Query: 683 ----HGLLMGYRDNIWVQALSLFDEV 704
               HGL +    N   +A++L D +
Sbjct: 804 NTLIHGLFL---HNKASEAMALIDRM 826



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 193/395 (48%), Gaps = 31/395 (7%)

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +     +++F DM+++   P  + FN LL+   +   ++   +L  +M   GI  D++T+
Sbjct: 167 IKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 226

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N +++  C   Q+ LA  I+ +M      P+ VT  ++++G+ +  R+ DA+++  +M  
Sbjct: 227 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 286

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           +G   D V+YN ++    K  R  +A    KE+E  GIR + VTY AL+ G     ++ +
Sbjct: 287 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 346

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             R+   M    ++PN++TYS L+D + K G   EA ++F E  +  +  D+V YS+LI+
Sbjct: 347 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 406

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            LC +  ++ A  + D M  +G   +VV+YN++I+ F       C    VE  +   +E 
Sbjct: 407 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF-------CKAKRVEDGMKLFREM 459

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
           +          + +     T N +I+ F Q     AG   K     QE       F +M 
Sbjct: 460 SQ---------RGLVSNTVTYNTLIQGFFQ-----AGDVDKA----QEF------FSQMD 495

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              I P++ T++ +L         E A ++ E+++
Sbjct: 496 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 530



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 200/390 (51%), Gaps = 7/390 (1%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
            Y  ++  L  RG+   A   F    K E+ K + G L  + +I  L +   +D A N+F+
Sbjct: 838  YGVVVNGLCKRGDTDLA---FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 894

Query: 218  TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                +G    V  +S+LIS     G   +A  + + M    + P++ T++A+IDA  K G
Sbjct: 895  EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 954

Query: 278  VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
                   +++D+M++  + P  +T++SL+   C    L EA + +F  MV +    D+ T
Sbjct: 955  -KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA-KQMFEFMVSKHCFPDVVT 1012

Query: 337  YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
            YNTL+   CK  +++   E+  EM  + +  N VTY+ +I G  +AG  D A  +F EM 
Sbjct: 1013 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 1072

Query: 397  FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
              G+  + ++YNT+L    K G+ E+A++V + ++ S +     TYN ++ G  K GK +
Sbjct: 1073 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 1132

Query: 457  EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
            +   +F  +    V P+++ Y+T+I  + + G  +EA  +F+E K+ G   +   Y+ LI
Sbjct: 1133 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 1192

Query: 517  DALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
             A  ++G  E++  L+ EM   G   +  T
Sbjct: 1193 RARLRDGDREASAELIKEMRSCGFAGDAST 1222



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 241/511 (47%), Gaps = 62/511 (12%)

Query: 207  GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISV---FNSMKRYNLKPNL 263
            G + L+  + +  L+ GY  ++           +SG C++A+S+   F+    Y+     
Sbjct: 614  GDITLSAELIKKMLSCGYAPSLLKDI-------KSGVCKKALSLLRAFSGKTSYD----- 661

Query: 264  VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
              Y   +   G   +     V +F +M+++   P  I F+ LL+  ++   ++   +L  
Sbjct: 662  --YREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGE 719

Query: 324  EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
            +M + GI  + +TY+ L++  C+ +Q+ LA  ++ +M      PN+VT S++++GY  + 
Sbjct: 720  QMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 779

Query: 384  RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            R+ +A+ +  +M   G   + V++NT++       +  EA+ +   M + G + D VTY 
Sbjct: 780  RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 839

Query: 444  ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
             ++ G  K+G  D    +  +M+   + P +L Y+T+ID   K     +A+ +F+E +  
Sbjct: 840  VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 899

Query: 504  GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATT 560
            G++ +VV YS+LI  LC  G    A  LL +M +  I P+V T++++IDAF   G+    
Sbjct: 900  GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 959

Query: 561  ECTVDD-VERDLGKQ--KESANLDAMCSQDDKDVQEAGR---------------TDNQII 602
            E   D+ V+R +       S+ ++  C  D  D  EA +               T N +I
Sbjct: 960  EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD--EAKQMFEFMVSKHCFPDVVTYNTLI 1017

Query: 603  KVFG---------QLVAEKAGQGKKENRCRQEILCILGVFQ------------KMHKLKI 641
            K F          ++  E + +G   N     IL I G+FQ            +M    +
Sbjct: 1018 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL-IQGLFQAGDCDMAQEIFKEMVSDGV 1076

Query: 642  KPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             PN++T++ +L+   +    E A ++ E L+
Sbjct: 1077 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 1107


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  212 bits (539), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 116/356 (32%), Positives = 191/356 (53%), Gaps = 3/356 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++ A  I E  +  G  ++    + L+  Y + G  +E +S  + M     +P+  T+
Sbjct: 260 GNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTF 319

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N++++  C  G V  KH +EI D ML+ G  PD  T+NSL+    + G  E A  + N+M
Sbjct: 320 NSLVNGLCRIGHV--KHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQM 377

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           + R    +  TYNTL+  +CK  Q++ A E+   + +K I P+V T++++I G       
Sbjct: 378 ILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNH 437

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             A+ +F EMK  G   D  +YN ++      GR EEAL + KEMESSG  ++ VTYN L
Sbjct: 438 RLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTL 497

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G+ K  + +E   +F++M+   +S N++TY+TLID   K    +EA Q+  +    GL
Sbjct: 498 IDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGL 557

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           K D   Y++L+   C+ G ++ A  ++  MT  G  P+ VTY ++I    ++   E
Sbjct: 558 KPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVE 613



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 163/601 (27%), Positives = 278/601 (46%), Gaps = 93/601 (15%)

Query: 36  HPSSRPHWTSHKVSLTKPPLSPSPRNAPKPAA-----TST------TVAPNPKPFHSLSP 84
           +P + PH      +LT+PP + S  +  KP +     TST       V+P+   F +LSP
Sbjct: 10  YPWTPPH------TLTQPPPTLSSAHNCKPFSKLISFTSTHHHDQQAVSPS---FSTLSP 60

Query: 85  LPSSKSELAPDFSG-------RRSTRFVSKMHF-----GRPKIAMSTRHSVVAEEALHHV 132
            P++  +L  +F+        RR +   S +        +P    S   SV+ EE L  +
Sbjct: 61  SPTT--QLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPS---SVIYEEVLRKL 115

Query: 133 TAFARDDVSLGD---ILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERK 189
                 D S G    +L++ +   C     TFL+       E     + F  AV   +  
Sbjct: 116 GK----DGSFGSMRRVLQEMKHTGCEIRRGTFLIL-----IESYAKFELFDEAVAVVDIM 166

Query: 190 NDQGKLA------SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGY 243
            ++  L       + ++++L    K+ L + +    ++ G    V  F+ LI A  R+  
Sbjct: 167 EEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQ 226

Query: 244 CQEAISVFNSMKRYNLKPNLVTYNAVIDA------------------------------- 272
            + AI +   M  Y L P+  T+  ++                                 
Sbjct: 227 IRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNV 286

Query: 273 -----CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
                C +G ++   V+   D+M   G +PDR TFNSL+    R G  + A  + + M+ 
Sbjct: 287 LVHGYCKEGRIE--EVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQ 344

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G D DIFTYN+L+  +CK  +++ A EI+ +M  ++ SPN VTY+T+I    K  ++++
Sbjct: 345 EGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEE 404

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +   +   GI  D  ++N+++           A+ + +EM++ G   D  TYN L+ 
Sbjct: 405 ATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLID 464

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
               +G+ +E   + ++M++   S N++TY+TLID + K    +EA +IF E +  G+  
Sbjct: 465 SLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISR 524

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           +VV Y+ LID LCKN  VE A  L+D+M  EG++P+  TYNS++  F R+   +   D V
Sbjct: 525 NVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIV 584

Query: 568 E 568
           +
Sbjct: 585 Q 585



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 187/355 (52%), Gaps = 3/355 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++++ L R+G V  A  I +  L EG+   ++ +++LI    + G  +EA+ + N M  
Sbjct: 320 NSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMIL 379

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            +  PN VTYN +I   C +  V+     E+   +   G+ PD  TFNSL+         
Sbjct: 380 RDFSPNTVTYNTLISTLCKENQVE--EATELARVLTSKGILPDVCTFNSLIQGLCLTNNH 437

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  LF EM  +G   D FTYN L+D++C   +++ A  ++ EM +   S NVVTY+T+
Sbjct: 438 RLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTL 497

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG+ K  R+++A  +F EM+  GI  + V+YNT++    K  R EEA  +  +M   G+
Sbjct: 498 IDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGL 557

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D  TYN+LL  + + G   +   + + M ++   P+ +TY TLI   SK G  + A +
Sbjct: 558 KPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASR 617

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           + R  +  G+      Y+ +I AL +      AV L  EM ++G  P+ VTY  +
Sbjct: 618 LLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVV 672



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 185/354 (52%), Gaps = 1/354 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+++   +  +   NEG+    + F++L++   R G+ + A+ + + M +    P++ TY
Sbjct: 295 GRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTY 354

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N++I    K G + +  VEI + M+     P+ +T+N+L++   +    E A  L   + 
Sbjct: 355 NSLIFGLCKLG-EVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLT 413

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +GI  D+ T+N+L+  +C      LA E+  EM  K   P+  TY+ +ID     GRL+
Sbjct: 414 SKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLE 473

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +AL++  EM+  G   + V+YNT++  + K  R EEA  +  EME  GI ++ VTYN L+
Sbjct: 474 EALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLI 533

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G  K  + +E  ++ +QM  + + P+  TY++L+  + + G  K+A  I +     G +
Sbjct: 534 DGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCE 593

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            D V Y  LI  L K G VE A  LL  +  +G+     TYN +I A  R   T
Sbjct: 594 PDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRT 647



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 215/470 (45%), Gaps = 33/470 (7%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR-YNLKP 261
           LG+ G     + + +   + G       F  LI +Y +     EA++V + M+  + LK 
Sbjct: 115 LGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKL 174

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +  TYN +++    G    K V  +   M+  G++PD  TFN L+    R      A  +
Sbjct: 175 DAFTYNFLLNVLVDGN-KLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILM 233

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             EM   G+  D  T+ TL+    +   M+ A  I  +M A     + VT + ++ GY K
Sbjct: 234 MEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCK 293

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            GR+++ L+   EM   G   DR ++N++++   ++G  + AL +   M   G   D  T
Sbjct: 294 EGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFT 353

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN+L+ G  K G+ +E   +  QM     SPN +TY+TLI    K    +EA ++ R   
Sbjct: 354 YNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLT 413

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G+  DV  +++LI  LC       A+ L +EM  +G  P+  TYN +ID+        
Sbjct: 414 SKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSL------- 466

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
           C+   +E  L   KE  +  + CS++         T N +I  F +    K  +  +E  
Sbjct: 467 CSRGRLEEALSLLKEMES--SGCSRN-------VVTYNTLIDGFCK---NKRIEEAEE-- 512

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                     +F +M    I  NVVT++ +++   +    E+A+ L++++
Sbjct: 513 ----------IFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQM 552



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 224/510 (43%), Gaps = 38/510 (7%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +  ++   G+ G       V   MK    +    T+  +I++  K  + F   V + D M
Sbjct: 108 YEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFEL-FDEAVAVVDIM 166

Query: 291 LRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
               G++ D  T+N LL V   G   +    + + MV RGI  D+ T+N L+ A+C+  Q
Sbjct: 167 EEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQ 226

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  A  +M EM +  +SP+  T++T++ G+ + G ++ AL +  +M   G     V+ N 
Sbjct: 227 IRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNV 286

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++  Y K GR EE L    EM + G R D  T+N+L+ G  + G       + + M  + 
Sbjct: 287 LVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEG 346

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P++ TY++LI    K G  +EA++I  +        + V Y+ LI  LCK   VE A 
Sbjct: 347 FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEAT 406

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            L   +T +GI P+V T+NS+I     +      ++  E    K          C  D+ 
Sbjct: 407 ELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKG---------CHPDEF 457

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
                          +  L+     +G+ E          L + ++M       NVVT++
Sbjct: 458 --------------TYNMLIDSLCSRGRLEE--------ALSLLKEMESSGCSRNVVTYN 495

Query: 650 AILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GYRDNIWV-QALSLFDEVKLM 707
            +++   +    E+A  + +E+ L       V +  L+ G   N  V +A  L D++ LM
Sbjct: 496 TLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQM-LM 554

Query: 708 DSSTASAF-YNALTDMLWHFGQ-KRGAQLV 735
           +      F YN+L       G  K+ A +V
Sbjct: 555 EGLKPDKFTYNSLLTYFCRAGDIKKAADIV 584


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 203/357 (56%), Gaps = 7/357 (1%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K   A  + +  + +G    +  +  +++   + G    A ++ N M++  L+P ++ YN
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260

Query: 268 AVIDACGKGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
            +ID   K    +KH+   + +F +M   G++P+ +T++SL++     G W  A  L ++
Sbjct: 261 TIIDGLCK----YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+ R I+ D+FT++ L+DA  K  ++  A ++  EM  ++I P++VTYS++I+G+    R
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD+A  MF  M       D V+YNT++  + K  R EE + V +EM   G+  + VTYN 
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G  + G  D  + +F++M +D V PN++TY+TL+D   K G  ++AM +F   +++ 
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           ++  +  Y+ +I+ +CK G VE    L   ++ +G++P+VV YN++I  F R  + E
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 242/495 (48%), Gaps = 35/495 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++S + ++ K D+  ++ E   N G  +  Y +S LI+ + R      A++V   M +
Sbjct: 85  SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 144

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              +PN+VT +++++  C    +     V + D M   G QP+ +TFN+L+         
Sbjct: 145 LGYEPNIVTLSSLLNGYCHSKRI--SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  L + MV +G   D+ TY  +++ +CK    DLAF ++ +M    + P V+ Y+T+
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K   +DDALN+F EM+  GI  + V+Y++++S     GR+ +A  +  +M    I
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  T++AL+  + K+GK  E  +++++M    + P+++TYS+LI+ +       EA Q
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F          DVV Y+ LI   CK   VE  + +  EM++ G+  N VTYN +I    
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442

Query: 556 RSATTECTVDDVERDLGKQKESAN-----------LDAMCSQDDKDVQEAGRTDNQIIKV 604
           ++   +C   D+ +++ K+  S             LD +C          G+ +  ++ V
Sbjct: 443 QAG--DC---DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN--------GKLEKAMV-V 488

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSR 657
           F  L   K            E +C  G       +F  +    +KP+VV ++ +++   R
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548

Query: 658 CNSFEDASMLLEELR 672
             S E+A  L +E++
Sbjct: 549 KGSKEEADALFKEMK 563



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 193/367 (52%), Gaps = 3/367 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G  DLA N+            V  ++ +I    +  +  +A+++F  M+   ++PN
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +VTY+++I   C  G   +     +  DM+   + PD  TF++L+    + G    A  L
Sbjct: 291 VVTYSSLISCLCNYG--RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           ++EMV R ID  I TY++L++  C   ++D A ++   M +K+  P+VVTY+T+I G+ K
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
             R+++ + +F EM   G+  + V+YN ++    + G  + A  + KEM S G+  + +T
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN LL G  K GK ++   +FE ++   + P + TY+ +I+   K G  ++   +F    
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G+K DVV Y+ +I   C+ G  E A +L  EM ++G  PN   YN++I A  R    E
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588

Query: 562 CTVDDVE 568
            + + ++
Sbjct: 589 ASAELIK 595



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 200/390 (51%), Gaps = 7/390 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           Y  ++  L  RG+   A   F    K E+ K + G L  + +I  L +   +D A N+F+
Sbjct: 224 YGVVVNGLCKRGDTDLA---FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
               +G    V  +S+LIS     G   +A  + + M    + P++ T++A+IDA  K G
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
                  +++D+M++  + P  +T++SL+   C    L EA + +F  MV +    D+ T
Sbjct: 341 -KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA-KQMFEFMVSKHCFPDVVT 398

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YNTL+   CK  +++   E+  EM  + +  N VTY+ +I G  +AG  D A  +F EM 
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  + ++YNT+L    K G+ E+A++V + ++ S +     TYN ++ G  K GK +
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           +   +F  +    V P+++ Y+T+I  + + G  +EA  +F+E K+ G   +   Y+ LI
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            A  ++G  E++  L+ EM   G   +  T
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFAGDAST 608



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 210/431 (48%), Gaps = 45/431 (10%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           V +F +M+++   P  I F+ LL+  ++   ++   +L  +M + GI  + +TY+ L++ 
Sbjct: 66  VALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINC 125

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C+ +Q+ LA  ++ +M      PN+VT S++++GY  + R+ +A+ +  +M   G   +
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V++NT++       +  EA+ +   M + G + D VTY  ++ G  K+G  D    +  
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M+   + P +L Y+T+ID   K     +A+ +F+E +  G++ +VV YS+LI  LC  G
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVER---DLGKQKES 577
               A  LL +M +  I P+V T++++IDAF   G+    E   D++ +   D      S
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365

Query: 578 ANLDAMCSQDDKDVQEAGR---------------TDNQIIKVFG---------QLVAEKA 613
           + ++  C  D  D  EA +               T N +IK F          ++  E +
Sbjct: 366 SLINGFCMHDRLD--EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423

Query: 614 GQGKKENRCRQEILCILGVFQ------------KMHKLKIKPNVVTFSAILNACSRCNSF 661
            +G   N     IL I G+FQ            +M    + PN++T++ +L+   +    
Sbjct: 424 QRGLVGNTVTYNIL-IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482

Query: 662 EDASMLLEELR 672
           E A ++ E L+
Sbjct: 483 EKAMVVFEYLQ 493


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 254/514 (49%), Gaps = 45/514 (8%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V +F+ +I  + + G   +A ++ N M +  ++P++VTYN+++DA C    +D   +V  
Sbjct: 264 VVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELV-- 321

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M+  GV+PD +T+ +++   S  G W+ +  +F +M  +G+   I T+N+ + ++CK
Sbjct: 322 LRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCK 381

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +   A EI   M  K   P++V+YS ++ GYA  GR  D  N+F  M   GI  +   
Sbjct: 382 HGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHC 441

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +N ++S +AK G  +EA+LV  EM+  G+R D VTY+ L+  + + G+  +    F QM 
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL-KADVVLYSALIDALCKNGLV 525
           +  + PN + Y +LI  +   G   +A ++  E    G+ + ++V +S++I +LC  G V
Sbjct: 502 SIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV 561

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
             A  + + +   G RP +VT+NS+ID +       C V  +E+  G       LDAM S
Sbjct: 562 MDAHDVFNLVIHIGDRPTIVTFNSLIDGY-------CLVGKMEKAFGV------LDAMVS 608

Query: 586 QD-DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
              + DV             +  LV+     GK ++         L +F++M   K+KP 
Sbjct: 609 VGIEPDVV-----------TYNTLVSGYCKSGKIDDG--------LILFREMLHKKVKPT 649

Query: 645 VVTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVYGVAHGLLMGY-RDNIWVQALS 699
            VT+S +L+          A  +  E+       D   Y +   LL G  R+++  +A++
Sbjct: 650 TVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKI---LLKGLCRNDLTDEAIT 706

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           LF ++  MD        N + + L+   ++  A 
Sbjct: 707 LFHKLGAMDCKFDITILNTVINALYKVRRREEAN 740



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 230/486 (47%), Gaps = 31/486 (6%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRYNLKPNL 263
           R  + DL    F   L  G        +  +     +    EA+ V  + M      PN 
Sbjct: 168 RARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNA 227

Query: 264 VTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNG--VQPDRITFNSLLAVCSRGGLWEAARN 320
           ++YN VI + CG      +  +++   M + G    PD ++FN+++    + G    A N
Sbjct: 228 ISYNTVIKSLCGDS--RSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 285

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L NEMV +G++ D+ TYN+++DA+CK   MD A  ++ +M  K + P+ +TY+ +I GY+
Sbjct: 286 LINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYS 345

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
            +G   ++  MF +M   G+    V++N+ +S   K GR ++A  + + M + G   D V
Sbjct: 346 CSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLV 405

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           +Y+ LL GY  +G++ ++  +F  M    +  N   ++ LI  ++K G+  EAM +F E 
Sbjct: 406 SYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM 465

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           +  G++ DVV YS LI A C+ G +  A+    +M   G+ PN V Y+S+I  F      
Sbjct: 466 QGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDL 525

Query: 561 ECTVDDVERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQIIKV--------F 605
               + V   + K     N       + ++C  ++  V +A    N +I +        F
Sbjct: 526 VKAKELVSEMMSKGIPRPNIVFFSSIIHSLC--NEGRVMDAHDVFNLVIHIGDRPTIVTF 583

Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
             L+      GK E           GV   M  + I+P+VVT++ +++   +    +D  
Sbjct: 584 NSLIDGYCLVGKMEKA--------FGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGL 635

Query: 666 MLLEEL 671
           +L  E+
Sbjct: 636 ILFREM 641



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 203/398 (51%), Gaps = 6/398 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           YT ++      G W ++ + F    K   +    G +  ++ +S L + G+   A+ IF+
Sbjct: 337 YTAIIHGYSCSGHWKESAKMFR---KMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQ 393

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
               +G+   + ++S L+  Y   G   +  ++F+SM    +  N   +N +I A  K G
Sbjct: 394 YMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRG 453

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +     + +F +M   GV+PD +T+++L++   R G    A   F++M+  G++ +   Y
Sbjct: 454 M-MDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVY 512

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNIS-PNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           ++L+   C    +  A E+++EM +K I  PN+V +S++I      GR+ DA ++F+ + 
Sbjct: 513 HSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVI 572

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
            +G     V++N+++  Y  +G+ E+A  V   M S GI  D VTYN L+ GY K GK D
Sbjct: 573 HIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKID 632

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           +   +F +M    V P  +TYS ++D     G    A ++F E   +G   D+  Y  L+
Sbjct: 633 DGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILL 692

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             LC+N L + A++L  ++     + ++   N++I+A 
Sbjct: 693 KGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINAL 730



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 204/410 (49%), Gaps = 6/410 (1%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDL 211
           C  D  +F  ++     +GE SKA       V++    +      ++++  L +   +D 
Sbjct: 260 CSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVV--TYNSIVDALCKARAMDK 317

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ +    +++G       ++A+I  Y  SG+ +E+  +F  M    L P +VT+N+ + 
Sbjct: 318 AELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMS 377

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           +  K G   K   EIF  M   G  PD ++++ LL   +  G +    NLF+ M  +GI 
Sbjct: 378 SLCKHGRS-KDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIV 436

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            +   +N L+ A  K   MD A  +  EM  + + P+VVTYST+I  + + GRL DA+  
Sbjct: 437 ANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEK 496

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI-RKDAVTYNALLGGYG 450
           FS+M  +G+  + V Y++++  +   G   +A  +  EM S GI R + V +++++    
Sbjct: 497 FSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLC 556

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
            +G+  +   +F  +      P ++T+++LID Y   G  ++A  +       G++ DVV
Sbjct: 557 NEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVV 616

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            Y+ L+   CK+G ++  + L  EM  + ++P  VTY+ ++D    +  T
Sbjct: 617 TYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRT 666



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 196/401 (48%), Gaps = 18/401 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASA-----MISILGRLGKVDLAK 213
           Y+ LL      G ++     F           D+G +A+      +IS   + G +D A 
Sbjct: 407 YSILLHGYATEGRFADMNNLF-------HSMADKGIVANCHCFNILISAHAKRGMMDEAM 459

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA- 272
            +F     +G    V  +S LISA+ R G   +A+  F+ M    L+PN V Y+++I   
Sbjct: 460 LVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGF 519

Query: 273 CGKGGVDFKHVVEIFDDMLRNGV-QPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGI 330
           C  G  D     E+  +M+  G+ +P+ + F+S++ ++C+ G + +A  ++FN ++H G 
Sbjct: 520 CMHG--DLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDA-HDVFNLVIHIGD 576

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
              I T+N+L+D  C   +M+ AF ++  M +  I P+VVTY+T++ GY K+G++DD L 
Sbjct: 577 RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLI 636

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +F EM    +    V+Y+ VL      GR   A  +  EM  SG   D  TY  LL G  
Sbjct: 637 LFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC 696

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           +    DE   +F ++ A     ++   +T+I+   K    +EA  +F     +GL  +V 
Sbjct: 697 RNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVS 756

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            Y  +I  L K G VE A ++   M K G  P+    N II
Sbjct: 757 TYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 797



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 188/350 (53%), Gaps = 4/350 (1%)

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
           N+F +  ++G     + F+ LISA+ + G   EA+ VF  M+   ++P++VTY+ +I A 
Sbjct: 425 NLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAF 484

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQ 332
            + G      +E F  M+  G++P+ + ++SL+   C  G L +A + L +EM+ +GI +
Sbjct: 485 CRMG-RLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKA-KELVSEMMSKGIPR 542

Query: 333 -DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            +I  +++++ ++C   ++  A ++   +      P +VT++++IDGY   G+++ A  +
Sbjct: 543 PNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGV 602

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
              M  +GI  D V+YNT++S Y K G+ ++ L++ +EM    ++   VTY+ +L G   
Sbjct: 603 LDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFH 662

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G+    ++MF +M     + ++ TY  L+    +  L  EA+ +F +      K D+ +
Sbjct: 663 AGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITI 722

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            + +I+AL K    E A  L   ++  G+ PNV TY  +I    +  + E
Sbjct: 723 LNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVE 772



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 174/429 (40%), Gaps = 81/429 (18%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN-------LFNEMVH-----RGIDQD 333
           +FD++LR G        N  LA  +R     +  N       LFN +       R     
Sbjct: 96  LFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVLALFNRICREEAGPRVAPLS 155

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMA----------------------------------- 358
           + TY  L+D  C+  + DL     A                                   
Sbjct: 156 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLL 215

Query: 359 -EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG--IGLDRVSYNTVLSIYA 415
             M      PN ++Y+T+I       R  +AL+M   M   G     D VS+NTV+  + 
Sbjct: 216 HRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 275

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K G   +A  +  EM   G+  D VTYN+++    K    D+   +  QM    V P+ L
Sbjct: 276 KQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGL 335

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY+ +I  YS  G +KE+ ++FR+    GL   +V +++ + +LCK+G  + A  +   M
Sbjct: 336 TYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYM 395

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
           T +G  P++V+Y+ ++  +     TE          G+  +  NL    S  DK +    
Sbjct: 396 TTKGHMPDLVSYSILLHGYA----TE----------GRFADMNNL--FHSMADKGIVAN- 438

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
                    F  L++  A +G  +          + VF +M    ++P+VVT+S +++A 
Sbjct: 439 ------CHCFNILISAHAKRGMMDEA--------MLVFTEMQGQGVRPDVVTYSTLISAF 484

Query: 656 SRCNSFEDA 664
            R     DA
Sbjct: 485 CRMGRLADA 493



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 147/302 (48%), Gaps = 3/302 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++I  L   G+V  A ++F   ++ G   T+  F++LI  Y   G  ++A  V ++M  
Sbjct: 549 SSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS 608

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             ++P++VTYN ++   C  G +D   +  +F +ML   V+P  +T++ +L      G  
Sbjct: 609 VGIEPDVVTYNTLVSGYCKSGKIDDGLI--LFREMLHKKVKPTTVTYSIVLDGLFHAGRT 666

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            AA+ +F+EM+  G   DI TY  LL  +C+    D A  +  ++ A +   ++   +T+
Sbjct: 667 SAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTV 726

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+   K  R ++A ++F+ +   G+  +  +Y  ++    K G  EEA  +   ME SG 
Sbjct: 727 INALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGC 786

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
              +   N ++    ++G   +      ++    +S    T S L+ ++S  G ++E ++
Sbjct: 787 APSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIK 846

Query: 496 IF 497
             
Sbjct: 847 FL 848


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 250/529 (47%), Gaps = 34/529 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S   S + R  + +L  +  +     G  + +Y  + +I+ + R      A SV   + +
Sbjct: 82  SRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMK 141

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +P+  T+N +I      G      V + D M+ NG QPD +T+NS++    R G   
Sbjct: 142 LGYEPDTTTFNTLIKGLFLEG-KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 200

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +L  +M  R +  D+FTY+T++D++C+   +D A  +  EM  K I  +VVTY++++
Sbjct: 201 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 260

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G  KAG+ +D   +  +M    I  + +++N +L ++ K G+ +EA  + KEM + GI 
Sbjct: 261 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 320

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + +TYN L+ GY  Q +  E   M + M  +  SP+++T+++LI  Y       + M++
Sbjct: 321 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 380

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           FR   + GL A+ V YS L+   C++G ++ A  L  EM   G+ P+V+TY  ++D    
Sbjct: 381 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 440

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
           +   E  ++  E DL K K                          I ++  ++      G
Sbjct: 441 NGKLEKALEIFE-DLQKSKMDLG----------------------IVMYTTIIEGMCKGG 477

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
           K E+           +F  +    +KPNV+T++ +++   +  S  +A++LL ++    N
Sbjct: 478 KVED--------AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 529

Query: 677 QVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
                 +  L+    RD     +  L +E+K    S  ++    + DML
Sbjct: 530 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 120/536 (22%), Positives = 245/536 (45%), Gaps = 58/536 (10%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+R L   G+W+         V RE   N      + ++ +  + GK+  A  +++ 
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPN--VITFNVLLDVFVKEGKLQEANELYKE 313

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +  G    +  ++ L+  Y       EA ++ + M R    P++VT+ ++I    KG  
Sbjct: 314 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI----KGYC 369

Query: 279 DFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
             K V   +++F ++ + G+  + +T++ L+    + G  + A  LF EMV  G+  D+ 
Sbjct: 370 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 429

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TY  LLD +C   +++ A EI  ++    +   +V Y+T+I+G  K G+++DA N+F  +
Sbjct: 430 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 489

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G+  + ++Y  ++S   K G   EA ++ ++ME  G   +  TYN L+  + + G  
Sbjct: 490 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 549

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
               ++ E+MK+   S +  +   +ID+            +    K+  L+         
Sbjct: 550 TASAKLIEEMKSCGFSADASSIKMVIDM------------LLSAMKRLTLR--------- 588

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE------- 568
               C +   +S   LL+    E IR + +T+  +      + TT   V+ +E       
Sbjct: 589 ---YCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPC--NTITTSLNVNTIEARGMNSA 643

Query: 569 ---RDLGKQKESANLDAMCSQDDK-----DVQEAGRTDNQI-IKVFGQL------VAEKA 613
              RDL K + S+ L    ++D +     ++   G  D +  + V  +L       A +A
Sbjct: 644 ELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPTDAVHYAHRA 703

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
           G+ ++  R +  ++    + ++M +  I PN +T+S++++   + N  ++A+ +L+
Sbjct: 704 GRMRRPGR-KMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLD 758



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/469 (22%), Positives = 212/469 (45%), Gaps = 51/469 (10%)

Query: 276 GGVDFKH--VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G VD K    + +F +M+R+   P  + F+   +  +R   +    +   ++   GI  +
Sbjct: 53  GIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHN 112

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           I+T N +++  C+  +   A+ ++ ++      P+  T++T+I G    G++ +A+ +  
Sbjct: 113 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVD 172

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M   G   D V+YN++++   + G    AL + ++ME   ++ D  TY+ ++    + G
Sbjct: 173 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 232

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
             D    +F++M+   +  +++TY++L+    K G + +   + ++     +  +V+ ++
Sbjct: 233 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 292

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            L+D   K G ++ A  L  EM   GI PN++TYN+++D +       C  +       +
Sbjct: 293 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY-------CMQN-------R 338

Query: 574 QKESAN-LDAM----CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
             E+ N LD M    CS D         T   +IK  G  + ++   G K          
Sbjct: 339 LSEANNMLDLMVRNKCSPDIV-------TFTSLIK--GYCMVKRVDDGMK---------- 379

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVYGVAHG 684
              VF+ + K  +  N VT+S ++    +    + A  L +E+     L D   YG+   
Sbjct: 380 ---VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI--- 433

Query: 685 LLMGYRDNIWVQ-ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
           LL G  DN  ++ AL +F++++          Y  + + +   G+   A
Sbjct: 434 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 482



 Score = 46.6 bits (109), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 8/60 (13%)

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF--------SEMKFLGIGLDR 404
           A E+  EM  + I+PN +TYS++IDG+ K  RLD+A  M         S++++L  GL R
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRYLLAGLMR 777


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 195/335 (58%), Gaps = 7/335 (2%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV---VEI 286
            +  +++   + G    A ++ N M++  L+P ++ YN +ID   K    +KH+   + +
Sbjct: 18  TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK----YKHMDDALNL 73

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F +M   G++P+ +T++SL++     G W  A  L ++M+ R I+ D+FT++ L+DA  K
Sbjct: 74  FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 133

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A ++  EM  ++I P++VTYS++I+G+    RLD+A  MF  M       D V+
Sbjct: 134 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 193

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNT++  + K  R EE + V +EM   G+  + VTYN L+ G  + G  D  + +F++M 
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           +D V PN++TY+TL+D   K G  ++AM +F   +++ ++  +  Y+ +I+ +CK G VE
Sbjct: 254 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 313

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
               L   ++ +G++P+VV YN++I  F R  + E
Sbjct: 314 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 348



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 194/369 (52%), Gaps = 3/369 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            +++ L + G  DLA N+            V  ++ +I    +  +  +A+++F  M+  
Sbjct: 21  VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 80

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            ++PN+VTY+++I   C  G   +     +  DM+   + PD  TF++L+    + G   
Sbjct: 81  GIRPNVVTYSSLISCLCNYG--RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 138

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L++EMV R ID  I TY++L++  C   ++D A ++   M +K+  P+VVTY+T+I
Sbjct: 139 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 198

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+ K  R+++ + +F EM   G+  + V+YN ++    + G  + A  + KEM S G+ 
Sbjct: 199 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 258

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + +TYN LL G  K GK ++   +FE ++   + P + TY+ +I+   K G  ++   +
Sbjct: 259 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 318

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F      G+K DVV Y+ +I   C+ G  E A +L  EM ++G  PN   YN++I A  R
Sbjct: 319 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR 378

Query: 557 SATTECTVD 565
               E + +
Sbjct: 379 DGDREASAE 387



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 190/388 (48%), Gaps = 33/388 (8%)

Query: 286 IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           + D M+  G QPD +T+  ++  +C RG   + A NL N+M    ++  +  YNT++D +
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDT-DLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK   MD A  +  EM  K I PNVVTYS++I      GR  DA  + S+M    I  D 
Sbjct: 62  CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +++ ++  + K G+  EA  +  EM    I    VTY++L+ G+    + DE ++MFE 
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M +    P+++TY+TLI  + K    +E M++FRE  Q GL  + V Y+ LI  L + G 
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
            + A  +  EM  +G+ PN++TYN+++D   ++   E  +   E     + E        
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT------ 295

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
                            I  +  ++      GK E+    ++ C L +        +KP+
Sbjct: 296 -----------------IYTYNIMIEGMCKAGKVEDG--WDLFCNLSL------KGVKPD 330

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELR 672
           VV ++ +++   R  S E+A  L +E++
Sbjct: 331 VVAYNTMISGFCRKGSKEEADALFKEMK 358



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 200/390 (51%), Gaps = 7/390 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           Y  ++  L  RG+   A   F    K E+ K + G L  + +I  L +   +D A N+F+
Sbjct: 19  YGVVVNGLCKRGDTDLA---FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 75

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
               +G    V  +S+LIS     G   +A  + + M    + P++ T++A+IDA  K G
Sbjct: 76  EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 135

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
                  +++D+M++  + P  +T++SL+   C    L EA + +F  MV +    D+ T
Sbjct: 136 -KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA-KQMFEFMVSKHCFPDVVT 193

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YNTL+   CK  +++   E+  EM  + +  N VTY+ +I G  +AG  D A  +F EM 
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  + ++YNT+L    K G+ E+A++V + ++ S +     TYN ++ G  K GK +
Sbjct: 254 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 313

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           +   +F  +    V P+++ Y+T+I  + + G  +EA  +F+E K+ G   +   Y+ LI
Sbjct: 314 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 373

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            A  ++G  E++  L+ EM   G   +  T
Sbjct: 374 RARLRDGDREASAELIKEMRSCGFAGDAST 403



 Score = 40.4 bits (93), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 33/178 (18%)

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           ++L+D M  +G +P++VTY  +++   +   T     D+  +L  + E   L+       
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT-----DLAFNLLNKMEQGKLEP------ 49

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
                            G L+      G  + +   +    L +F++M    I+PNVVT+
Sbjct: 50  -----------------GVLIYNTIIDGLCKYKHMDD---ALNLFKEMETKGIRPNVVTY 89

Query: 649 SAILNACSRCNSFEDASMLLEEL--RLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEV 704
           S++++       + DAS LL ++  R  +  V+  +  +    ++   V+A  L+DE+
Sbjct: 90  SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 147


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/363 (33%), Positives = 195/363 (53%), Gaps = 10/363 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK   A+ IF+T  ++G     Y +++ IS   + G  +EA  +   M    L PN VTY
Sbjct: 265 GKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTY 324

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           NA+ID  C KG +D  +     D+M+  G+    +T+N  +      G    A N+  EM
Sbjct: 325 NALIDGYCNKGDLDKAYAYR--DEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEM 382

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             +G+  D  T+N L++  C+      AF ++ EM  K I P +VTY+++I    K  R+
Sbjct: 383 REKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRM 442

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            +A  +FS+++  G+  D + +N ++  +   G  + A  + KEM++  +  D +TYN L
Sbjct: 443 KEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTL 502

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + GY ++GK +E R++ ++MK   + P+ ++Y+TLI  YSK G  K+A ++  E    G 
Sbjct: 503 MQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGF 562

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
              ++ Y+ALI  LCKN   E A  LL EM  +GI P+  TY SII+A         TVD
Sbjct: 563 DPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAME-------TVD 615

Query: 566 DVE 568
           D+E
Sbjct: 616 DLE 618



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 206/399 (51%), Gaps = 5/399 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +  L+R      + ++A++CF    ++    N +    + M+S+  +L +  +A  ++  
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIET--CNQMLSLFLKLNRTQMAWVLYAE 206

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
                  +++Y F+ +I+   + G  ++A      M+   +KPN+VTYN +I   C +G 
Sbjct: 207 MFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG- 265

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             F+    IF  M   G++PD  T+NS ++   + G  E A  L  +M+  G+  +  TY
Sbjct: 266 -KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTY 324

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L+D  C    +D A+    EM +K I  ++VTY+  I      GR+ DA NM  EM+ 
Sbjct: 325 NALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMRE 384

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  D V++N +++ Y + G  + A  +  EM   GI+   VTY +L+   GK+ +  E
Sbjct: 385 KGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKE 444

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +F +++ + + P+++ ++ LID +   G    A Q+ +E     +  D + Y+ L+ 
Sbjct: 445 ADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQ 504

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             C+ G VE A  LLDEM + GI+P+ ++YN++I  + +
Sbjct: 505 GYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSK 543



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 226/468 (48%), Gaps = 36/468 (7%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           L K + A   F     +G+   +   + ++S + +    Q A  ++  M R N++ +L T
Sbjct: 159 LKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYT 218

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNE 324
           +N +I+   K G   K   E    M   GV+P+ +T+N+++   C RG  ++ AR +F  
Sbjct: 219 FNIMINVLCKEG-KLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGK-FQRARVIFQT 276

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M  +G++ D +TYN+ +  +CK  +++ A  ++ +M    + PN VTY+ +IDGY   G 
Sbjct: 277 MKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGD 336

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD A     EM   GI    V+YN  +      GR  +A  + KEM   G+  DAVT+N 
Sbjct: 337 LDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNI 396

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ GY + G       + ++M    + P L+TY++LI V  K    KEA  +F + +Q G
Sbjct: 397 LINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEG 456

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           L  D+++++ALID  C NG ++ A  LL EM    + P+ +TYN+++  + R        
Sbjct: 457 LLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCRE------- 509

Query: 565 DDVERDLGKQKESAN-LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
                  GK +E+   LD M     + ++    + N +I  +      K G  K   R R
Sbjct: 510 -------GKVEEARQLLDEM---KRRGIKPDHISYNTLISGYS-----KRGDMKDAFRVR 554

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            E          M      P ++T++A++    +    E A  LL+E+
Sbjct: 555 DE----------MMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEM 592



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 212/476 (44%), Gaps = 58/476 (12%)

Query: 251 FNSMKRYNLKPNLVTYNAVID--ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
            N ++R  L P   T   + D  A  +  VD K  + IFD ++R              A 
Sbjct: 113 INLIQRLILSPT-CTNRTIFDELALARDRVDAKTTL-IFDLLVR--------------AY 156

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
           C      EA    F  +  +G   +I T N +L    K  +  +A+ + AEM   NI  +
Sbjct: 157 CELKKPNEALE-CFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSS 215

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           + T++ MI+   K G+L  A      M+ LG+  + V+YNT++  +   G+F+ A ++ +
Sbjct: 216 LYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQ 275

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            M+  G+  D  TYN+ + G  K+G+ +E   +  +M    + PN +TY+ LID Y   G
Sbjct: 276 TMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKG 335

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
              +A     E    G+ A +V Y+  I AL   G +  A +++ EM ++G+ P+ VT+N
Sbjct: 336 DLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHN 395

Query: 549 SIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
            +I+ +       C   D +R  G       LD M     K +Q    T   +I V G  
Sbjct: 396 ILINGY-------CRCGDAKRAFGL------LDEMVG---KGIQPTLVTYTSLIYVLG-- 437

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
                    K NR ++       +F K+ +  + P+++ F+A+++      + + A  LL
Sbjct: 438 ---------KRNRMKEAD----ALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLL 484

Query: 669 EELR----LFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
           +E+     L D   Y     L+ GY R+    +A  L DE+K          YN L
Sbjct: 485 KEMDNMKVLPDEITYNT---LMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTL 537



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 1/102 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R GKV+ A+ + +     G      +++ LIS Y + G  ++A  V + M      P ++
Sbjct: 508 REGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTIL 567

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL 306
           TYNA+I    K   + +H  E+  +M+  G+ PD  T+ S++
Sbjct: 568 TYNALIQGLCKNQ-EGEHAEELLKEMVSKGITPDDSTYLSII 608


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 264/533 (49%), Gaps = 41/533 (7%)

Query: 171 EWSKAIQCFAFAVK--------REERKNDQGKLASAMISILGRLGKVD-LAKNIFETALN 221
           +W+++ Q F+F  K        R +       LA  ++     +  VD   +++F+   N
Sbjct: 69  DWARSQQFFSFQCKCLALHILTRYKLYKTAQSLAEEVV-----VNTVDETGEDLFQCLKN 123

Query: 222 EGY--GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
             Y   ++   F  ++ +  R     +A+S+ N  K Y   P +++YNA++DA  +    
Sbjct: 124 SYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQS 183

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            K    IF +M+ +GV P+  T+N L+   C+ G L E     F EM   G   ++ TYN
Sbjct: 184 VKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNL-EMGLXFFGEMERNGCLPNVVTYN 242

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           T++DA CK  ++  AF+++  M  K ++PN+++Y+ +I+G  + G++ +   +  EM   
Sbjct: 243 TIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKR 302

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
               DRV++NT+++ Y  +G F +AL++  EM  +G+  + VTY  L+    K G  +  
Sbjct: 303 RYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA 362

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
               +QM+   + PN  TY+TLID +S+ G  K+A QI +E  + G    ++ Y+ALI+ 
Sbjct: 363 MEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALING 422

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE----CTVDDVERDLGKQ 574
            C  G +E A  LL EM + G  P+VV+Y++II  F R+   E      V+ V + +   
Sbjct: 423 HCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPD 482

Query: 575 --KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
               S+ +  +C Q         R   ++  +F ++++      +          CI G 
Sbjct: 483 VATYSSLIQGLCKQ---------RRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533

Query: 633 FQKMHKLK-------IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
             K  +L          P++VT++ ++N  ++ +  ++A  LL +L L++  V
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL-LYEESV 585



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 171/339 (50%), Gaps = 21/339 (6%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    V  ++ LI++  ++G    A+   + M+   L PN  TY  +ID   + G   K 
Sbjct: 338 GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF-LKQ 396

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             +I  +M+ NG  P  IT+N+L+      G  E A  L  EM+ RG   D+ +Y+T++ 
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
             C+  +++ AF++  EM AK ISP+V TYS++I G  K  RL +  ++F EM  LG+  
Sbjct: 457 GFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPP 516

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D V+Y ++++ Y   G  ++AL +  EM   G   D VTYN L+ G+ KQ +  E +R+ 
Sbjct: 517 DEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            ++  +   PN +TY+TLID  +             EFK A          AL+   C  
Sbjct: 577 LKLLYEESVPNEITYNTLIDNCNN-----------LEFKSA---------LALMKGFCMK 616

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           GL+  A  +L+ M ++G + N   YN II    +    E
Sbjct: 617 GLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIE 655



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 193/415 (46%), Gaps = 73/415 (17%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           V +A+ IF+  +  G    VY ++ LI  +  +G  +  +  F  M+R    PN+VTYN 
Sbjct: 184 VKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNT 243

Query: 269 VIDA------------------------------------CGKGGVDFKHVVEIFDDMLR 292
           +IDA                                    C +G    K   EI ++M +
Sbjct: 244 IIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREG--QMKETSEILEEMSK 301

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD- 351
               PDR+TFN+L+      G +  A  L  EMV  G+  ++ TY TL++++CK   ++ 
Sbjct: 302 RRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNR 361

Query: 352 ----------------------------------LAFEIMAEMPAKNISPNVVTYSTMID 377
                                              A++IM EM     +P ++TY+ +I+
Sbjct: 362 AMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALIN 421

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+   GR++DA  +  EM   G   D VSY+T++S + +    E+A  +  EM + GI  
Sbjct: 422 GHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISP 481

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  TY++L+ G  KQ +  EV  +F++M +  + P+ +TY++LI+ Y   G   +A+++ 
Sbjct: 482 DVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLH 541

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            E  Q G   D+V Y+ LI+   K    + A  LL ++  E   PN +TYN++ID
Sbjct: 542 DEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID 596



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 151/316 (47%), Gaps = 18/316 (5%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           LG+++ A  + +  +  G+   V ++S +IS + R+   ++A  +   M    + P++ T
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNE 324
           Y+++I    K       V ++F +ML  G+ PD +T+ SL+ A C  G L +A R L +E
Sbjct: 486 YSSLIQGLCKQR-RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR-LHDE 543

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID------- 377
           M+ +G   DI TYN L++   K ++   A  ++ ++  +   PN +TY+T+ID       
Sbjct: 544 MIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEF 603

Query: 378 --------GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
                   G+   G +++A  +   M   G  L+   YN ++  ++K+G  E+A  + KE
Sbjct: 604 KSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKE 663

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M  SG    +VT  AL      +GK  E+ ++ +     C          LI + SK G 
Sbjct: 664 MLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGN 723

Query: 490 YKEAMQIFREFKQAGL 505
                 + ++   +GL
Sbjct: 724 MDAVFNVLKDMALSGL 739


>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Glycine max]
          Length = 832

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 238/476 (50%), Gaps = 35/476 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           +I  L + G ++    +F    N+  Y      ++ +I  + R     +A  +F  M+ +
Sbjct: 121 LIKELTQRGSIEHCNRVFRWLKNQKNYRARNDIYNMMIRLHARHNRTDQARGLFFEMQEW 180

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             KP++ TYNA+I+A G+ G  ++  + I DDMLR  + P R T+N+L+  C   G W+ 
Sbjct: 181 RCKPDVETYNAIINAHGRAG-QWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKE 239

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A N+  +M   G+  D+ T+N +L A   GAQ   A      M   +I P+  T + +I 
Sbjct: 240 ALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVIH 299

Query: 378 GYAKAGRLDDALNMFSEM--KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
              K  + D A+ +F+ M  K      D V++ +++ +Y+  G+ E        M + G+
Sbjct: 300 CLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGL 359

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + V+YNAL+G Y  +G  +E    F ++K +   P++++Y++L++ Y +     +A Q
Sbjct: 360 KPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQ 419

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           IF   K+  LK ++V Y+ALIDA   NGL+  A+ +L EM +EGI+PNVV+  +++ A G
Sbjct: 420 IFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACG 479

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
           R                           CS+  K        + + IK+    VA  A  
Sbjct: 480 R---------------------------CSRKVKIDTVLTAAEMRGIKL--NTVAYNAAI 510

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           G   N    E    +G+++ M K KIK + VT++ +++ C + + + +A   +EE+
Sbjct: 511 GSCMN--VGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEI 564



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 202/418 (48%), Gaps = 9/418 (2%)

Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           ++ KK      G D   +  +L    +  ++SKA+  F   +K    + D   L + +I 
Sbjct: 242 NVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFEL-MKGTHIRPDTTTL-NIVIH 299

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNT--VYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
            L +L + D A  IF +   +    T  V  F+++I  Y   G  +   + FN M    L
Sbjct: 300 CLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGL 359

Query: 260 KPNLVTYNAVIDACGKGGVDFK-HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           KPN+V+YNA+I A    G+D + H+   F+++ +NG +PD +++ SLL    R      A
Sbjct: 360 KPNIVSYNALIGAYAARGMDNEAHL--FFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKA 417

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           R +F+ M    +  ++ +YN L+DA      +  A +I+ EM  + I PNVV+  T++  
Sbjct: 418 RQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAA 477

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             +  R      + +  +  GI L+ V+YN  +     +G +++A+ + K M    I+ D
Sbjct: 478 CGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTD 537

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           +VTY  L+ G  K  KY E     E++    +  +   YS+ I  YSK G   EA   F 
Sbjct: 538 SVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFN 597

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             K +G   DVV Y+A++DA       E A +L +EM    I+ + +   +++ +F +
Sbjct: 598 LMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNK 655



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 233/507 (45%), Gaps = 62/507 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+  GR G+   A NI +  L      +   ++ LI+A G SG  +EA++V   M  
Sbjct: 190 NAIINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTE 249

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P+LVT+N ++ A  K G  +   +  F+ M    ++PD  T               
Sbjct: 250 NGVGPDLVTHNIILSAF-KSGAQYSKALSYFELMKGTHIRPDTTTL-------------- 294

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN--ISPNVVTYST 374
                                N ++  + K  Q D A EI   M  K    +P+VVT+++
Sbjct: 295 ---------------------NIVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTS 333

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I  Y+  G++++    F+ M   G+  + VSYN ++  YA  G   EA L   E++ +G
Sbjct: 334 IIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNG 393

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
            R D V+Y +LL  YG+  K  + R++F++MK + + PNL++Y+ LID Y   GL  +A+
Sbjct: 394 FRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAI 453

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +I RE +Q G++ +VV    L+ A  +        ++L      GI+ N V YN+ I + 
Sbjct: 454 KILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSC 513

Query: 555 GRSATTECTVDDVERDLGKQKESAN------LDAMCSQDDKDVQEAGRTDNQII------ 602
                 +  +  + + + K+K   +      L + C +  K   EA     +I+      
Sbjct: 514 MNVGEYDKAI-GLYKSMRKKKIKTDSVTYTVLISGCCKMSK-YGEALSFMEEIMHLKLPL 571

Query: 603 --KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
             +V+   +   + QG        +I+     F  M      P+VVT++A+L+A +   +
Sbjct: 572 SKEVYSSAICAYSKQG--------QIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAEN 623

Query: 661 FEDASMLLEELRLFDNQVYGVAHGLLM 687
           +E A  L EE+     ++  +A   LM
Sbjct: 624 WEKAYALFEEMEASSIKLDTIACAALM 650



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 148/292 (50%), Gaps = 1/292 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I      G  + A   F      G+   + ++++L++AYGRS    +A  +F+ MKR
Sbjct: 367 NALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKR 426

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             LKPNLV+YNA+IDA G  G+     ++I  +M + G+QP+ ++  +LLA C R     
Sbjct: 427 NKLKPNLVSYNALIDAYGSNGL-LADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKV 485

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               +      RGI  +   YN  + +     + D A  +   M  K I  + VTY+ +I
Sbjct: 486 KIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLI 545

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G  K  +  +AL+   E+  L + L +  Y++ +  Y+K G+  EA      M+SSG  
Sbjct: 546 SGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCY 605

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            D VTY A+L  Y     +++   +FE+M+A  +  + +  + L+  ++KGG
Sbjct: 606 PDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGG 657



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 158/391 (40%), Gaps = 42/391 (10%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           YT LL   G   +  KA Q F     R +R   +  L S  A+I   G  G +  A  I 
Sbjct: 401 YTSLLNAYGRSQKPHKARQIF----DRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKIL 456

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
                EG    V +   L++A GR     +  +V  + +   +K N V YNA I +C   
Sbjct: 457 REMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNV 516

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC--------------------------- 309
           G ++   + ++  M +  ++ D +T+  L++ C                           
Sbjct: 517 G-EYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEV 575

Query: 310 --------SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
                   S+ G    A + FN M   G   D+ TY  +LDA       + A+ +  EM 
Sbjct: 576 YSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEME 635

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
           A +I  + +  + ++  + K G+    L++   M+   I      +  ++S  + L  + 
Sbjct: 636 ASSIKLDTIACAALMRSFNKGGQPGRVLSLAESMREKEIPFSDTIFFEMVSACSILQDWR 695

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
            A+ + K +E S     +   N  L   GK GK + + ++F +M A     NL TYS L+
Sbjct: 696 TAVDMIKYIEPSLPVISSGCLNQFLHSLGKSGKIETMLKLFFKMLASGADVNLNTYSILL 755

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
                 G +++ +++ +  + AG+     +Y
Sbjct: 756 KNLLSSGNWRKYLEVLQWMEDAGIHPSKEMY 786


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 210/409 (51%), Gaps = 17/409 (4%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKVDLA 212
           D +T+  L+  L   G+   A+      ++  E+ + Q  L   SA+I  L + G V  A
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALH----LLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDA 214

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
             +       G       +++LI      G  QE   +   M R N+ P+  T+N +IDA
Sbjct: 215 LGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDA 274

Query: 273 CGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHR 328
             K G     ++E   +   M + G +PD +T+N+L+   CSR  + EA R LFN MV R
Sbjct: 275 LCKEG----RILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEA-RELFNRMVKR 329

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G++ D+  YN L+D  CK   +D A  +  E+  KN+ P + +Y+++IDG   +GR+   
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             +  EM       D V+YN ++    K GR  EAL V   M   G++ + VTYNA++ G
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           Y  +   +  + +F +M    + P++L Y+ LI+ Y K  +  EA+ +F+E +   L  D
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           +  Y++LID LC  G +     LLDEM   G  P+V+TYN ++DAF ++
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKT 558



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 230/479 (48%), Gaps = 36/479 (7%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           KL  A++    R+G    A ++F    ++G   ++  F+ LI+ Y    +   A S+  +
Sbjct: 60  KLLGAIV----RMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLAT 115

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           + +   +PNLVT+N +I+     G+ FK  ++   ++L  G   D+ T+ +L+   S+ G
Sbjct: 116 ILKSGYQPNLVTFNTIINGFCINGMIFK-ALDFCQNLLAQGYLFDQFTYGTLINGLSKNG 174

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             +AA +L  EM    +  ++  Y+ L+D +CK   +  A  + +++  + I  + VTY+
Sbjct: 175 QIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYN 234

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           ++IDG    GR  +   + ++M    +  D  ++N ++    K GR  EA  V   M   
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKR 294

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G + D VTYNAL+ GY  +    E R +F +M    + P++L Y+ LID Y K  +  EA
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEA 354

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           M +F+E     L   +  Y++LID LC +G +     LLDEM      P+VVTYN +IDA
Sbjct: 355 MVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDA 414

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
             +               G+  E+  +  M  +  K V+    T N ++   G  +    
Sbjct: 415 LCKE--------------GRILEALGVLVMMMK--KGVKPNIVTYNAMMD--GYCLRNNV 456

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              K              +F +M K  ++P+++ ++ ++N   +    ++A +L +E+R
Sbjct: 457 NVAKD-------------IFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMR 502



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 198/409 (48%), Gaps = 10/409 (2%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           DDYTF  L+  L   G   +A    A   KR E K D     + M     R   V  A+ 
Sbjct: 264 DDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNALMEGYCSR-ENVHEARE 321

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-C 273
           +F   +  G    V  ++ LI  Y ++    EA+ +F  +   NL P + +YN++ID  C
Sbjct: 322 LFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLC 381

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQ 332
             G +   HV ++ D+M  +   PD +T+N L+ A+C  G + EA   L   M+ +G+  
Sbjct: 382 NSGRI--SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLV-MMMKKGVKP 438

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           +I TYN ++D  C    +++A +I   M    + P+++ Y+ +I+GY K   +D+A+ +F
Sbjct: 439 NIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLF 498

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            EM+   +  D  SYN+++     LGR      +  EM  SG   D +TYN LL  + K 
Sbjct: 499 KEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKT 558

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
             +D+   +F Q+  + + P+  T   ++D   KG   K A    +     G   +V  Y
Sbjct: 559 QPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTY 617

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + LI+ALCK+G    A+ LL +M      P+ +T+  II    +   T+
Sbjct: 618 TILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETD 666



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 200/408 (49%), Gaps = 6/408 (1%)

Query: 153 LCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLA 212
           L  A  Y  L+    + G W +  Q     V+     +D     + +I  L + G++  A
Sbjct: 227 LLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT--FNILIDALCKEGRILEA 284

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
           + +       G    +  ++AL+  Y       EA  +FN M +  L+P+++ YN +ID 
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344

Query: 273 -CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            C    VD   V  +F ++    + P   ++NSL+      G     + L +EM      
Sbjct: 345 YCKTKMVDEAMV--LFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D+ TYN L+DA+CK  ++  A  ++  M  K + PN+VTY+ M+DGY     ++ A ++
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F+ M   G+  D ++YN +++ Y K    +EA+++ KEM    +  D  +YN+L+ G   
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G+   V+ + ++M     SP+++TY+ L+D + K   + +A+ +FR+  + G+  D   
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYT 581

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             A++D LCK   ++ A   L  +   G  PNV TY  +I+A  +  +
Sbjct: 582 NHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGS 629



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 232/496 (46%), Gaps = 21/496 (4%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +A++ FN M R    P    ++ ++ A  + G  +   + +F  +   G+ P   TF  L
Sbjct: 38  DAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMG-HYPTAISLFTQLQSKGISPSIATFTIL 96

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +           A +L   ++  G   ++ T+NT+++  C    +  A +    + A+  
Sbjct: 97  INCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGY 156

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
             +  TY T+I+G +K G++  AL++  EM+   +  + V Y+ ++    K G   +AL 
Sbjct: 157 LFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALG 216

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           +C ++   GI  DAVTYN+L+ G    G++ EV ++  +M  + V P+  T++ LID   
Sbjct: 217 LCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALC 276

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G   EA  +     + G K D+V Y+AL++  C    V  A  L + M K G+ P+V+
Sbjct: 277 KEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVL 336

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
            YN +ID +       C    V+  +   KE  N + + +    +    G  ++  I   
Sbjct: 337 NYNVLIDGY-------CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389

Query: 606 GQLVAEKAGQGKKEN----------RCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNA 654
            +L+ E  G  +  +           C++  IL  LGV   M K  +KPN+VT++A+++ 
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449

Query: 655 CSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTA 712
               N+   A  +   +     +   + + +L+ GY +  +  +A+ LF E++  +    
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509

Query: 713 SAFYNALTDMLWHFGQ 728
            A YN+L D L + G+
Sbjct: 510 IASYNSLIDGLCNLGR 525



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 150/306 (49%), Gaps = 37/306 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  L   G++   K + +          V  ++ LI A  + G   EA+ V   M +
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             +KPN+VTYNA++D  C +  V+     +IF+ M+++G++PD + +N L+    +  + 
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAK--DIFNRMVKSGLEPDILNYNVLINGYCKTEMV 491

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  LF EM H+ +  DI +YN+L+D +C   ++    E++ EM     SP+V+TY+ +
Sbjct: 492 DEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNIL 551

Query: 376 IDGYAKAGRLDDALNMFSE-------------------------------MKFL---GIG 401
           +D + K    D A+++F +                               +K L   G  
Sbjct: 552 LDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCS 611

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            +  +Y  +++   K G F EA+L+  +ME +    DA+T+  ++G   ++ + D+  ++
Sbjct: 612 PNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKL 671

Query: 462 FEQMKA 467
            E+M A
Sbjct: 672 REEMIA 677



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 143/278 (51%), Gaps = 6/278 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   G   +A+      +K+  + N      +AM+        V++AK+IF  
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT--YNAMMDGYCLRNNVNVAKDIFNR 465

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +  G    +  ++ LI+ Y ++    EAI +F  M+  NL P++ +YN++ID  C  G 
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +   HV E+ D+M  +G  PD IT+N LL    +   ++ A +LF ++V  GI  D +T 
Sbjct: 526 I--PHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTN 582

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           + ++D +CKG ++ +A + +  +     SPNV TY+ +I+   K G   +A+ + S+M+ 
Sbjct: 583 HAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMED 642

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
                D +++  ++ +  +    ++A  + +EM + G+
Sbjct: 643 NDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/360 (32%), Positives = 199/360 (55%), Gaps = 10/360 (2%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGN------TVYAFSALISAYGRSGYCQEAISVFN 252
           +I+ L +  +VD A  +FE  +N G  N       V  ++ LI    + G  +E + +  
Sbjct: 346 LINHLCKFRRVDEALEVFE-KMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVE 404

Query: 253 SMK-RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
            M+ +    PN VTYN +ID   K  +  +   E+FD M ++GV P+ +T N+L+    +
Sbjct: 405 RMRSQPRCMPNTVTYNCLIDGYCKASM-IEAARELFDQMNKDGVPPNVVTLNTLVDGMCK 463

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            G    A   FNEM  +G+  +  TY  L+ A C    ++ A E+  EM     SP+ + 
Sbjct: 464 HGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIV 523

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y T+I G ++AG+LD A  + S+MK  G   D VS+N +++ + +  + +EA  + KEME
Sbjct: 524 YYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEME 583

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           ++GI+ D VTYN L+  + K G +    R+ ++M  + + P ++TY  LI  Y   G   
Sbjct: 584 NAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLD 643

Query: 492 EAMQIFREFKQAG-LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           EAM+IFR+      +  + V+Y+ LI++LC+   V+ A+SL+D+M  +G++PN  T+N++
Sbjct: 644 EAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAM 703



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 181/348 (52%), Gaps = 8/348 (2%)

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
           NTV  ++ LI  Y ++   + A  +F+ M +  + PN+VT N ++D   K G      VE
Sbjct: 415 NTV-TYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHG-RINGAVE 472

Query: 286 IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
            F++M   G++ + +T+ +L+ A C+   + E A  LF+EM+  G   D   Y TL+  +
Sbjct: 473 FFNEMQGKGLKGNAVTYTALIRAFCNVNNI-EKAMELFDEMLEAGCSPDAIVYYTLISGL 531

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
            +  ++D A  ++++M     SP++V+++ +I+G+ +  +LD+A  M  EM+  GI  D 
Sbjct: 532 SQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDG 591

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V+YNT++S ++K G F  A  + K+M   G+    VTY AL+  Y   G  DE  ++F  
Sbjct: 592 VTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRD 651

Query: 465 MKADC-VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           M +   V PN + Y+ LI+   +      A+ +  + K  G+K +   ++A+   L +  
Sbjct: 652 MSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKN 711

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSI---IDAFGRSATTECTVDDVE 568
            +  A  L+D MT+    P+ +T   +   + A G +A  +  V   E
Sbjct: 712 WLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGYE 759



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 144/537 (26%), Positives = 244/537 (45%), Gaps = 68/537 (12%)

Query: 234 LISAYGRSGYCQEAISVFNSM--KRYNLKPNLVTYNAVIDACGKG-----GVDFKHVVEI 286
           LI    R G   +A+ + + M   +    PN  T + V  A  K       VD + +V +
Sbjct: 198 LIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGL 257

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
                 + V P+ I    L++   R G  + A ++ + ++  G   +  + N LL A+ +
Sbjct: 258 VSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGR 317

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK------FLGI 400
             +      ++AEM   +I PNVVT+  +I+   K  R+D+AL +F +M       FL +
Sbjct: 318 AREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFL-V 376

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG-IRKDAVTYNALLGGYGKQGKYDEVR 459
             D ++YNT++    K+GR EE L + + M S      + VTYN L+ GY K    +  R
Sbjct: 377 EPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAAR 436

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +F+QM  D V PN++T +TL+D   K G    A++ F E +  GLK + V Y+ALI A 
Sbjct: 437 ELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAF 496

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
           C    +E A+ L DEM + G  P+ + Y ++I    ++      +D     L K KE+  
Sbjct: 497 CNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGK----LDRASFVLSKMKEAGF 552

Query: 580 ----------LDAMCSQDDKD-------------VQEAGRTDNQIIKVFGQLVAEKAGQG 616
                     ++  C ++  D             ++  G T N +I  F      K G  
Sbjct: 553 SPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFS-----KTGDF 607

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL----R 672
              +R          + +KM K  + P VVT+ A+++A     + ++A  +  ++    +
Sbjct: 608 STAHR----------LMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSK 657

Query: 673 LFDNQV-YGVAHGLLMGYRDNIWVQALSLFDEVKLM----DSSTASAFYNALTDMLW 724
           +  N V Y +    L   R N    ALSL D++K+     +++T +A +  L +  W
Sbjct: 658 VPPNTVIYNILINSLC--RKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNW 712



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 234/509 (45%), Gaps = 70/509 (13%)

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
           A +E + N+++  + LIS   RSG    A  V + + +        + NA++ A G+   
Sbjct: 262 AEHEVFPNSIW-LTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAR- 319

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG------IDQ 332
           +FK +  +  +M    +QP+ +TF  L+    +    + A  +F +M + G      ++ 
Sbjct: 320 EFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM-NGGESNGFLVEP 378

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYSTMIDGYAKAGRLDDALNM 391
           D+ TYNTL+D +CK  + +    ++  M ++    PN VTY+ +IDGY KA  ++ A  +
Sbjct: 379 DVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAAREL 438

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F +M   G+  + V+ NT++    K GR   A+    EM+  G++ +AVTY AL+  +  
Sbjct: 439 FDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCN 498

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
               ++   +F++M     SP+ + Y TLI   S+ G    A  +  + K+AG   D+V 
Sbjct: 499 VNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVS 558

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           ++ LI+  C+   ++ A  +L EM   GI+P+ VTYN++I  F ++              
Sbjct: 559 FNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTG------------- 605

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIK--------VFGQLVAEKAGQGKKENRCR 623
                             D   A R   +++K         +G L+      G  +   +
Sbjct: 606 ------------------DFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMK 647

Query: 624 QEILCILGVFQKMHKL-KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA 682
                   +F+ M    K+ PN V ++ ++N+  R N  + A  L+++++     V GV 
Sbjct: 648 --------IFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMK-----VKGVK 694

Query: 683 ------HGLLMGYRDNIWV-QALSLFDEV 704
                 + +  G ++  W+ +A  L D +
Sbjct: 695 PNTNTFNAMFKGLQEKNWLSKAFELMDRM 723



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 114/239 (47%), Gaps = 6/239 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+R   N     KA++ F   +  E   +    +   +IS L + GK+D A  +   
Sbjct: 489 YTALIRAFCNVNNIEKAMELFDEML--EAGCSPDAIVYYTLISGLSQAGKLDRASFVLSK 546

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G+   + +F+ LI+ + R     EA  +   M+   +KP+ VTYN +I    K G 
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTG- 605

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRG-IDQDIFT 336
           DF     +   M++ G+ P  +T+ +L+ A C  G L EA + +F +M     +  +   
Sbjct: 606 DFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMK-IFRDMSSTSKVPPNTVI 664

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           YN L++++C+  Q+DLA  +M +M  K + PN  T++ M  G  +   L  A  +   M
Sbjct: 665 YNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRM 723


>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 849

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 216/439 (49%), Gaps = 39/439 (8%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFA---VKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           D T LL+ L   G W +A   F +       E  K D   +   M+ +LGR  +  +A  
Sbjct: 165 DITGLLKGLDLSGNWERAFLLFEWVWLNFGSENMKVDDQSV-EFMVKMLGRESQYSIASK 223

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +F+    E Y   V A + ++ AY R+G  + AI +F  MK   L P LVTYN ++D  G
Sbjct: 224 LFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYG 283

Query: 275 KGGVDFKHVVEI-----------------------------------FDDMLRNGVQPDR 299
           K G  +  ++E+                                   FDD+  NG +P  
Sbjct: 284 KMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGT 343

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
            T+NS+L V  + G++  A N+  EM     + D  TYN L+ A  +    D    ++  
Sbjct: 344 ATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDT 403

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M +K + PN +TY+T+I+ Y KAG  D AL +F +MK LG   +  +YN VL +  K  R
Sbjct: 404 MASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSR 463

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            E+ + +  +M+ +G   D +T+N +L   G++GK   V ++  +MK     P+  T++T
Sbjct: 464 SEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNT 523

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LI  Y + G   +  +++ E   AG    +  Y+AL++AL + G  ++A S++ +M K+G
Sbjct: 524 LISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKG 583

Query: 540 IRPNVVTYNSIIDAFGRSA 558
            +PN  +Y+ ++  + ++ 
Sbjct: 584 FKPNETSYSLLLHCYSKAG 602



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/488 (25%), Positives = 231/488 (47%), Gaps = 79/488 (16%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLA 212
           G   Y  +L+  G  G +++A+      +K  E  N +    +   +++   R G  D  
Sbjct: 342 GTATYNSMLQVFGKAGVYTEALN----ILKEMEDNNCEPDAITYNELVAAYVRAGFHDEG 397

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
             + +T  ++G       ++ +I+AYG++G   +A+ VF  MK     PN+ TYN V+  
Sbjct: 398 AAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVL 457

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
            GK     + +++I  DM  NG  PDRIT+N++LAVC   G  +    +  EM + G + 
Sbjct: 458 LGKRSRS-EDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEP 516

Query: 333 DIFTYNTLLDAICK-GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
           D  T+NTL+ A  + G+++D+A ++  EM A   +P + TY+ +++  A+ G    A ++
Sbjct: 517 DKETFNTLISAYGRCGSEVDVA-KMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESV 575

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGR----------------FEEALLV--------- 426
             +M+  G   +  SY+ +L  Y+K G                 F   +L+         
Sbjct: 576 VLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYK 635

Query: 427 CKEM----------ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
           C+++          +++G + D V  N++L  + +  K ++   M + +    + PNL+T
Sbjct: 636 CRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVT 695

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y++LID+Y++ G   +A ++ ++ + +G+  DVV Y+ +I   CK GLV+ A+ +L EMT
Sbjct: 696 YNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMT 755

Query: 537 KEGIRP-----------------------------------NVVTYNSIIDAFGRSATTE 561
             G++P                                   N +TY  +ID + ++   +
Sbjct: 756 ANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHK 815

Query: 562 CTVDDVER 569
             +D V +
Sbjct: 816 EAMDFVSK 823



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 126/534 (23%), Positives = 236/534 (44%), Gaps = 66/534 (12%)

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN----EMVHRGIDQ 332
           G     ++E F+ +    ++ D      LL      G WE A  LF           +  
Sbjct: 144 GSSLNDLIEFFNSVKGELLESD---ITGLLKGLDLSGNWERAFLLFEWVWLNFGSENMKV 200

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D  +   ++  + + +Q  +A ++   +P +  S +V   +T++  YA+ G+   A+ +F
Sbjct: 201 DDQSVEFMVKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIF 260

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL-VCKEMESSGIRKDAVTYNALLGGYGK 451
            +MK  G+    V+YN +L +Y K+GR    +L +  EM S G+  D  T   ++   G+
Sbjct: 261 EKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGR 320

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           +G  DE RR F+ +K +   P   TY++++ V+ K G+Y EA+ I +E +    + D + 
Sbjct: 321 EGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAIT 380

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           Y+ L+ A  + G  +   +++D M  +G+ PN +TY ++I+A+G++       D      
Sbjct: 381 YNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDA----DKALEVF 436

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQ-IIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
           G+ KE   +  +C+ ++  V    R+ ++ +IK+   +   K      +      +L + 
Sbjct: 437 GQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDM---KLNGCPPDRITWNTMLAVC 493

Query: 631 G----------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG 680
           G          V ++M     +P+  TF+ +++A  RC S  D + +  E+         
Sbjct: 494 GEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEM--------- 544

Query: 681 VAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGK 740
           VA G                         +     YNAL + L   G  + A+ VVL+ +
Sbjct: 545 VAAGF------------------------TPCITTYNALLNALARRGNWKAAESVVLDMR 580

Query: 741 RRQVWENVWSESCLDLHLMS-SGAARAMVHAWLLNIHSIVFEGHELPKLLSILT 793
           ++    N  S S L LH  S +G  R      L  +   +++GH  P  + + T
Sbjct: 581 KKGFKPNETSYSLL-LHCYSKAGNVRG-----LEKVEMEIYDGHVFPSWMLLRT 628


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 210/373 (56%), Gaps = 14/373 (3%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++GK+D A  IF+ A+  G+   V  ++ALI+ + ++    EA  +   M   +L P++V
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLF 322
           TYN++++  C  G VD   ++     ++  G  P+ IT+++L++ +C      E+AR L 
Sbjct: 192 TYNSLVNGLCKNGRVDEARML-----IVDKGFSPNVITYSTLISGLCRELRRLESARQLL 246

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            +MV  G   DI +YN L+  + +   +  A ++   +  +   P V TY+ +IDG  K 
Sbjct: 247 EKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKE 306

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
            R+++A  +FS +   G+  D ++Y   +    K GR E+ALL+ K+M+  G   D V++
Sbjct: 307 DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSH 366

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           NA++ G  K+ + DE   +   M+A   SPN ++++TLI    + G +K+AM  F+E  +
Sbjct: 367 NAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLK 426

Query: 503 AGLKADVVLYSALIDALCK---NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
            G+K  VV Y+ L+D LCK    G ++ A++L D M ++G  P+VVTY+++ID  G++  
Sbjct: 427 RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAG- 485

Query: 560 TECTVDDVERDLG 572
               +DD  R LG
Sbjct: 486 ---KLDDARRLLG 495



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 254/479 (53%), Gaps = 31/479 (6%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK++ A    E  L +G  + +  F+  IS   R+    +A +VF+ M+++   PN +TY
Sbjct: 30  GKIEKAHRFVEQLLVKGLCD-ISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITY 88

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEM 325
           NA++     GG        +++ M++ G  PD +T+N+LL   C  G L EA + +F+  
Sbjct: 89  NALLSGLCNGG-RMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALK-IFDGA 146

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V RG   D+ TYN L++  CK  ++D A  I+  M ++++ P+VVTY+++++G  K GR+
Sbjct: 147 VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRV 206

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLS-IYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           D+A  +  +    G   + ++Y+T++S +  +L R E A  + ++M  +G + D V+YNA
Sbjct: 207 DEARMLIVDK---GFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNA 263

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G  ++    E  ++F  +      P + TY+ LID   K     EA ++F    + G
Sbjct: 264 LIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHG 323

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           L+ D + Y+  ID LCK G VE A+ +L +M ++G  P+VV++N++I+   +    E  V
Sbjct: 324 LEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCK----EKRV 379

Query: 565 DDVERDL-GKQKESANLDA------MCSQDDKDV-QEAGRTDNQIIK-------VFGQLV 609
           D+ E  L G + +  + +A      +C Q      ++A  T  +++K       V   ++
Sbjct: 380 DEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNIL 439

Query: 610 AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
            +   + ++E R ++ I     +F  M +    P+VVT+SA+++   +    +DA  LL
Sbjct: 440 VDGLCKARQEGRIKEAIT----LFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLL 494



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 190/362 (52%), Gaps = 5/362 (1%)

Query: 197 SAMISILGR-LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           S +IS L R L +++ A+ + E  +  G    + +++ALI    R     EA+ +F S+ 
Sbjct: 226 STLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVL 285

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           R   +P + TYN +ID   K         E+F  ++++G++PD IT+   +    + G  
Sbjct: 286 RQGYEPEVPTYNILIDGLLKED-RVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 344

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  +  +M  +G   D+ ++N +++ +CK  ++D A  +++ M AK  SPN ++++T+
Sbjct: 345 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 404

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL---GRFEEALLVCKEMES 432
           I G  +AG+   A+  F EM   G+    V+YN ++    K    GR +EA+ +   M  
Sbjct: 405 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 464

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G   D VTY+AL+ G GK GK D+ RR+   M+A    PN+ TY++LI          E
Sbjct: 465 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDE 524

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A+++F    + G   D + Y  +I ALCK  +V+ A++L D   + G+ P    Y S+ID
Sbjct: 525 ALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLID 584

Query: 553 AF 554
             
Sbjct: 585 GL 586



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 169/362 (46%), Gaps = 14/362 (3%)

Query: 145 ILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +L+K     C  D   Y  L+  L      S+A++ F   +    R+  + ++ +  I I
Sbjct: 245 LLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVL----RQGYEPEVPTYNILI 300

Query: 203 LGRL--GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
            G L   +V+ A  +F   +  G       ++  I    ++G  ++A+ +   M      
Sbjct: 301 DGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV 360

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           P++V++NAVI+  C +  VD   V  +   M   G  P+ I+FN+L+    R G W+ A 
Sbjct: 361 PDVVSHNAVINGLCKEKRVDEAEV--LLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 418

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQ---MDLAFEIMAEMPAKNISPNVVTYSTMI 376
             F EM+ RG+   + TYN L+D +CK  Q   +  A  +   M  K   P+VVTYS +I
Sbjct: 419 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALI 478

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  KAG+LDDA  +   M+  G   +  +YN+++S    L + +EAL +   M   G  
Sbjct: 479 DGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCV 538

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +TY  ++    KQ   D+   +F+      V P    Y +LID         EA+++
Sbjct: 539 PDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598

Query: 497 FR 498
            +
Sbjct: 599 LQ 600



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 176/359 (49%), Gaps = 39/359 (10%)

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D +T   LL ++ K  +++ A   + ++  K +  ++ T++  I G  +A R+ DA  +F
Sbjct: 15  DAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTVF 73

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
             M+  G   +R++YN +LS     GR  +A  + + M  +G   D VTYN LL G+ K 
Sbjct: 74  DGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKV 133

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           GK DE  ++F+        P+++TY+ LI+ + K     EA +I +      L  DVV Y
Sbjct: 134 GKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTY 193

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA-TTECTVDDVERDL 571
           ++L++ LCKNG V+ A  L+     +G  PNV+TY+++I    R     E     +E+ +
Sbjct: 194 NSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMV 250

Query: 572 --GKQKESANLDAMCS--QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK---------- 617
             G + +  + +A+      ++ V EA       +K+FG ++     QG           
Sbjct: 251 LNGCKPDIVSYNALIHGLAREQGVSEA-------LKLFGSVLR----QGYEPEVPTYNIL 299

Query: 618 -----KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                KE+R  +       +F  + K  ++P+ +T++  ++   +    EDA ++L+++
Sbjct: 300 IDGLLKEDRVNEA----FELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 354



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 146/309 (47%), Gaps = 40/309 (12%)

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           SP+  T   ++    K+G+++ A     ++   G+  D  ++N  +S   +  R  +A  
Sbjct: 13  SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQT 71

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           V   M   G   + +TYNALL G    G+  + + ++E+M     SP+++TY+TL+  + 
Sbjct: 72  VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G   EA++IF    + G   DVV Y+ALI+  CK   ++ A  +L  M  E + P+VV
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
           TYNS+++   ++              G+  E+  L          + + G + N I   +
Sbjct: 192 TYNSLVNGLCKN--------------GRVDEARML----------IVDKGFSPNVI--TY 225

Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
             L++    + ++    RQ       + +KM     KP++V+++A+++  +R     +A 
Sbjct: 226 STLISGLCRELRRLESARQ-------LLEKMVLNGCKPDIVSYNALIHGLAREQGVSEA- 277

Query: 666 MLLEELRLF 674
                L+LF
Sbjct: 278 -----LKLF 281


>gi|299471552|emb|CBN80038.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 416

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 198/364 (54%), Gaps = 27/364 (7%)

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN 293
           +I+A GR G  ++A+ +   M    L PN++TYNAV  AC KG   +K  + +  +M   
Sbjct: 36  VITACGRGGQWEQAVKLLREMPTAGLSPNVITYNAVFAACAKG-EQWKGALALLKEMTAV 94

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G+ PD IT++S +  C++G  W+ A  L  EM   G+  D+ TY++ +DA  KG Q   A
Sbjct: 95  GLTPDVITYSSAVDACAKGEQWKGALALLKEMTAVGLTPDVITYSSAVDACAKGEQWKEA 154

Query: 354 FEIMAEMPAKNISPNVV------------TYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             ++ EM A  ++PNV+            TY++ IDG +K G+  + L +  EM  +G+ 
Sbjct: 155 LALLKEMTAVGLTPNVISYNGLPSMSPWCTYNSAIDGCSKGGQWKETLALLKEMAAVGLT 214

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG-------- 453
            + ++YN+ +   +K G+++EAL + KEM + G+  D ++Y++ +    K          
Sbjct: 215 PNVITYNSAIDACSKGGQWKEALALLKEMTAVGLTPDVISYSSAIDACSKGATAQLFPCA 274

Query: 454 ---KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
              ++     + ++M    ++PN+++YS  I   +KG  +K A+ + ++    GL  DV+
Sbjct: 275 KGEQWKGALALLKEMTVVGLTPNVVSYSAAI-ACAKGDQWKVALALLKKMTAVGLTPDVI 333

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE-- 568
             ++ IDA  K G  E+A++LL EM   G+ P+VV YNS IDA  R    +  VD +E  
Sbjct: 334 TCNSAIDACSKGGQWETALALLKEMAAVGLTPSVVGYNSAIDACARGGRWKEGVDLLEEM 393

Query: 569 RDLG 572
           R+LG
Sbjct: 394 RELG 397



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 204/420 (48%), Gaps = 52/420 (12%)

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           ++  C RGG WE A  L  EM   G+  ++ TYN +  A  KG Q   A  ++ EM A  
Sbjct: 36  VITACGRGGQWEQAVKLLREMPTAGLSPNVITYNAVFAACAKGEQWKGALALLKEMTAVG 95

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           ++P+V+TYS+ +D  AK  +   AL +  EM  +G+  D ++Y++ +   AK  +++EAL
Sbjct: 96  LTPDVITYSSAVDACAKGEQWKGALALLKEMTAVGLTPDVITYSSAVDACAKGEQWKEAL 155

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            + KEM + G+  + ++YN L                   M   C      TY++ ID  
Sbjct: 156 ALLKEMTAVGLTPNVISYNGL-----------------PSMSPWC------TYNSAIDGC 192

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
           SKGG +KE + + +E    GL  +V+ Y++ IDA  K G  + A++LL EMT  G+ P+V
Sbjct: 193 SKGGQWKETLALLKEMAAVGLTPNVITYNSAIDACSKGGQWKEALALLKEMTAVGLTPDV 252

Query: 545 VTYNSIIDAFGRSATTE---CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
           ++Y+S IDA  + AT +   C         G+Q + A L  +     K++   G T N +
Sbjct: 253 ISYSSAIDACSKGATAQLFPCAK-------GEQWKGA-LALL-----KEMTVVGLTPN-V 298

Query: 602 IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
           +     +   K  Q K            L + +KM  + + P+V+T ++ ++ACS+   +
Sbjct: 299 VSYSAAIACAKGDQWKVA----------LALLKKMTAVGLTPDVITCNSAIDACSKGGQW 348

Query: 662 EDASMLLEELRL--FDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
           E A  LL+E+        V G    +    R   W + + L +E++ +        Y+AL
Sbjct: 349 ETALALLKEMAAVGLTPSVVGYNSAIDACARGGRWKEGVDLLEEMRELGVVPDVITYHAL 408



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 124/227 (54%), Gaps = 13/227 (5%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +++ I    + G  +E +++   M    L PN++TYN+ IDAC KGG  +K  + +  +M
Sbjct: 185 YNSAIDGCSKGGQWKETLALLKEMAAVGLTPNVITYNSAIDACSKGG-QWKEALALLKEM 243

Query: 291 LRNGVQPDRITFNSLLAVCSRGGL-----------WEAARNLFNEMVHRGIDQDIFTYNT 339
              G+ PD I+++S +  CS+G             W+ A  L  EM   G+  ++ +Y+ 
Sbjct: 244 TAVGLTPDVISYSSAIDACSKGATAQLFPCAKGEQWKGALALLKEMTVVGLTPNVVSYSA 303

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
            + A  KG Q  +A  ++ +M A  ++P+V+T ++ ID  +K G+ + AL +  EM  +G
Sbjct: 304 AI-ACAKGDQWKVALALLKKMTAVGLTPDVITCNSAIDACSKGGQWETALALLKEMAAVG 362

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +    V YN+ +   A+ GR++E + + +EM   G+  D +TY+AL+
Sbjct: 363 LTPSVVGYNSAIDACARGGRWKEGVDLLEEMRELGVVPDVITYHALM 409



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 111/199 (55%), Gaps = 11/199 (5%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG------ 276
           G    V  +++ I A  + G  +EA+++   M    L P++++Y++ IDAC KG      
Sbjct: 212 GLTPNVITYNSAIDACSKGGQWKEALALLKEMTAVGLTPDVISYSSAIDACSKGATAQLF 271

Query: 277 ----GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
               G  +K  + +  +M   G+ P+ +++++ +A C++G  W+ A  L  +M   G+  
Sbjct: 272 PCAKGEQWKGALALLKEMTVVGLTPNVVSYSAAIA-CAKGDQWKVALALLKKMTAVGLTP 330

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D+ T N+ +DA  KG Q + A  ++ EM A  ++P+VV Y++ ID  A+ GR  + +++ 
Sbjct: 331 DVITCNSAIDACSKGGQWETALALLKEMAAVGLTPSVVGYNSAIDACARGGRWKEGVDLL 390

Query: 393 SEMKFLGIGLDRVSYNTVL 411
            EM+ LG+  D ++Y+ ++
Sbjct: 391 EEMRELGVVPDVITYHALM 409



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 135/256 (52%), Gaps = 19/256 (7%)

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
           L + S+  V++   + G++E+A+ + +EM ++G+  + +TYNA+     K  ++     +
Sbjct: 28  LHQKSHCMVITACGRGGQWEQAVKLLREMPTAGLSPNVITYNAVFAACAKGEQWKGALAL 87

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            ++M A  ++P+++TYS+ +D  +KG  +K A+ + +E    GL  DV+ YS+ +DA  K
Sbjct: 88  LKEMTAVGLTPDVITYSSAVDACAKGEQWKGALALLKEMTAVGLTPDVITYSSAVDACAK 147

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
               + A++LL EMT  G+ PNV++YN  + +     T    +D   +  G+ KE+  L 
Sbjct: 148 GEQWKEALALLKEMTAVGLTPNVISYNG-LPSMSPWCTYNSAIDGCSKG-GQWKETLAL- 204

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
                  K++   G T N I          K GQ K+           L + ++M  + +
Sbjct: 205 ------LKEMAAVGLTPNVITYNSAIDACSKGGQWKEA----------LALLKEMTAVGL 248

Query: 642 KPNVVTFSAILNACSR 657
            P+V+++S+ ++ACS+
Sbjct: 249 TPDVISYSSAIDACSK 264



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 17/121 (14%)

Query: 189 KNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAI 248
           K DQ K+A   +++L ++  V L  ++                ++ I A  + G  + A+
Sbjct: 309 KGDQWKVA---LALLKKMTAVGLTPDVITC-------------NSAIDACSKGGQWETAL 352

Query: 249 SVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
           ++   M    L P++V YN+ IDAC +GG  +K  V++ ++M   GV PD IT+++L+  
Sbjct: 353 ALLKEMAAVGLTPSVVGYNSAIDACARGG-RWKEGVDLLEEMRELGVVPDVITYHALMVT 411

Query: 309 C 309
           C
Sbjct: 412 C 412


>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1508

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 231/425 (54%), Gaps = 8/425 (1%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           D+ F+++ +G +  W +A++ +   +  ++      ++ + ++S+LG+  +  +A  IF 
Sbjct: 197 DFCFVVKSVG-QSSWQRALELYE-CLTMQQWYATNARMVATILSVLGKANQEGIAVEIFA 254

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
            A      +TV  ++A++  Y R+G  ++   +FN M+    +P++V++N +I+A  K  
Sbjct: 255 KA-ESVIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSC 313

Query: 278 VDFKHV-VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
                + +E+ D++ + G++PD IT+N+L++ CSR    + A  +F+ M       D++T
Sbjct: 314 ATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWT 373

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN ++    +      A  +  ++ +   SP+ VTY++++  ++K G  +   ++  EM 
Sbjct: 374 YNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMV 433

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
            +G G D ++YNT++ +Y K GR +EAL + ++M+SSG   DAVTY  L+   GK  K +
Sbjct: 434 KMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIE 493

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E  ++  +M    V P L TYS LI  Y+K G   EA + F   +++G+KAD + YS ++
Sbjct: 494 EASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVML 553

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
           D   +   ++ A +L  EM + G  P+   Y  ++ A  R    E   D +ER +   KE
Sbjct: 554 DFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVR----ENMGDVIERVVQDTKE 609

Query: 577 SANLD 581
             +++
Sbjct: 610 LGSMN 614



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 14/321 (4%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I +L  +GK  L  +I               ++ LISA  R    +EAI VF+ M+    
Sbjct: 321 IELLDEVGKFGLRPDII-------------TYNTLISACSRESNLKEAIGVFSHMESNRC 367

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           +P+L TYNA+I   G+ G   K    +F+ +  NG  PD +T+NSLL   S+ G  E  R
Sbjct: 368 QPDLWTYNAMISVYGRCGFALK-AEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVR 426

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           ++  EMV  G  +D  TYNT++    K  + D A  +  +M +   +P+ VTY+ +ID  
Sbjct: 427 DISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLL 486

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            KA ++++A  + SEM   G+     +Y+ ++  YAK+GR  EA      M  SGI+ D 
Sbjct: 487 GKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADH 546

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           + Y+ +L  + +  +  +   ++++M     +P+   Y  ++    +  +     ++ ++
Sbjct: 547 LAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQD 606

Query: 500 FKQAGLKADVVLYSALIDALC 520
            K+ G      + S L+   C
Sbjct: 607 TKELGSMNPHDISSVLVKGGC 627



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 160/768 (20%), Positives = 325/768 (42%), Gaps = 107/768 (13%)

Query: 136  ARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAF-AVKREERKNDQGK 194
            A DD+ +  I +     LC A      L E  +RG       C  + ++  E  K++Q  
Sbjct: 677  APDDIQM--ITEALIIILCKAGKLDAALEEYRSRGGLGTFRSCTMYESLIHECTKSEQFD 734

Query: 195  LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
            +AS + S + R   V+ ++ ++++               ++S Y R G+ + A  +    
Sbjct: 735  IASQLFSDM-RFNGVEPSECLYQS---------------MVSVYCRIGFPETAQHLLYHA 778

Query: 255  KRYNLKPNLVTYNAV--IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            ++ ++  + VT + +  I+  GK  + ++    I +++ +   + DR  +N+L+   +  
Sbjct: 779  EKNDIILDNVTVHIIDIIETYGKLKM-WQSAESIVENLRQRCSKMDRKVWNALIHAYAFS 837

Query: 313  GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            G +E AR +FN M+  G    + + N LL A+    ++   + ++ E+   ++  +  + 
Sbjct: 838  GCYERARAIFNTMMREGPSPTVESVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSI 897

Query: 373  STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
              M++ +A+AG L +   +++ MK  G       Y  ++ +  +  R  +  ++  EM  
Sbjct: 898  LLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGE 957

Query: 433  SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY-------- 484
            +G + D   +N++L  Y    ++  +  +++ ++   ++P+  TY+TLI +Y        
Sbjct: 958  AGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEE 1017

Query: 485  ---------------------------SKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
                                       SK  LY +A ++F E +  G K D   Y  ++ 
Sbjct: 1018 GLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMK 1077

Query: 518  ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
                +G  + A +LL+ M + GI PN  T + ++ ++G+S   E   D + ++L  +   
Sbjct: 1078 MYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPE-EADRILKNL--RTMG 1134

Query: 578  ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
            A LD +               + +I  + +    KAG  K                 +M 
Sbjct: 1135 AVLDTLPY-------------SSVIDAYLKKGDAKAGIEK---------------LTEMK 1166

Query: 638  KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL--FDNQVYGVAHGLLMGYRDNIWV 695
            +  I+P+   ++  + A S      DA+ LL  L+   FD  +       L+G +    V
Sbjct: 1167 EAAIEPDHRIWTCFIRAASLSGEVNDANNLLNALQAVGFDLPIR------LLGEKSESLV 1220

Query: 696  QAL-SLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN-----VW 749
              +      ++ ++ + A  F NAL D+LW F  +  A  V     +R ++ +       
Sbjct: 1221 SEVDQCLGRLEHVEDNAAFNFVNALVDLLWAFELRATASWVFQLAIKRSIYRHDIFRVAQ 1280

Query: 750  SESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGH-ELPKLLSILTGWGKHSKVVGDGALR 808
             +   D   +S+G+A   +  WL ++     +G+ E PK + ++TG  +++ V  D  L+
Sbjct: 1281 KDWGADFRKLSAGSALVGLTLWLDHMQDASLQGYPESPKSVVLITGTAEYNMVSLDSTLK 1340

Query: 809  RAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHD 856
                  L  MG+PF       G  ++    +  WL++S     L L D
Sbjct: 1341 ----AFLWEMGSPFLPCKTRHGVLVAKAHSLRMWLKDSSFCLDLELKD 1384



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 120/575 (20%), Positives = 230/575 (40%), Gaps = 63/575 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++    + G  +  ++I E  +  G+G     ++ +I  YG+ G   EA+ ++  MK 
Sbjct: 410 NSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKS 469

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+ VTY  +ID  GK     +   ++  +ML  GV+P   T+++L+   ++ G   
Sbjct: 470 SGRNPDAVTYTVLIDLLGKAS-KIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRV 528

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A   FN M   GI  D   Y+ +LD   +  ++  A  +  EM     +P+   Y  M+
Sbjct: 529 EAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVML 588

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
               +    D    +  + K LG     ++ + + S+  K G ++    + K   S+G  
Sbjct: 589 PALVRENMGDVIERVVQDTKELG----SMNPHDISSVLVKGGCYDHGAKMLKVAISNGYE 644

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D   + +++  Y    +Y E   + E  +        +    LI +  K G    A++ 
Sbjct: 645 LDREIFLSIMSSYSSSARYSEACELVEFFREHAPDDIQMITEALIIILCKAGKLDAALEE 704

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           +R     G      +Y +LI    K+   + A  L  +M   G+ P+   Y S++  + R
Sbjct: 705 YRSRGGLGTFRSCTMYESLIHECTKSEQFDIASQLFSDMRFNGVEPSECLYQSMVSVYCR 764

Query: 557 SATTECT--------------------VDDVERDLGKQK--ESA-----NLDAMCSQDDK 589
               E                      + D+    GK K  +SA     NL   CS+ D+
Sbjct: 765 IGFPETAQHLLYHAEKNDIILDNVTVHIIDIIETYGKLKMWQSAESIVENLRQRCSKMDR 824

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
                        KV+  L+   A  G  E R R        +F  M +    P V + +
Sbjct: 825 -------------KVWNALIHAYAFSGCYE-RAR-------AIFNTMMREGPSPTVESVN 863

Query: 650 AILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDS 709
            +L A        +  ++++EL+  D ++   +  L++      + QA +LF+  K+ + 
Sbjct: 864 GLLQALIVDGRLSELYVVIQELQDMDLKISKSSILLML----EAFAQAGNLFEVQKVYNG 919

Query: 710 STASAF------YNALTDMLWHFGQKRGAQLVVLE 738
             A+ +      Y  +  +L  F + R  ++++ E
Sbjct: 920 MKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSE 954



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 129/289 (44%), Gaps = 43/289 (14%)

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           T  ++LG   ++G   E+    E + AD V      Y+ ++ VY++ G +++  ++F   
Sbjct: 235 TILSVLGKANQEGIAVEIFAKAESVIADTVQ----VYNAMMGVYARNGNFEKVNEMFNLM 290

Query: 501 KQAGLKADVVLYSALIDALCKNGLVES--AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           ++ G + D+V ++ LI+A  K+    S  A+ LLDE+ K G+RP+++TYN++I A  R +
Sbjct: 291 RERGCEPDIVSFNTLINAKVKSCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRES 350

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
                           KE+  +      +    Q    T N +I V+G     + G   K
Sbjct: 351 NL--------------KEA--IGVFSHMESNRCQPDLWTYNAMISVYG-----RCGFALK 389

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF---- 674
                        +F+K+      P+ VT++++L A S+  + E    + EE+       
Sbjct: 390 AEH----------LFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGK 439

Query: 675 DNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
           D   Y     + M  +     +AL L+ ++K    +  +  Y  L D+L
Sbjct: 440 DEMTYNTI--IHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLL 486


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 240/482 (49%), Gaps = 46/482 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ +   G +D A +   +    G    V  ++ALI+A+ R+   +EA+ +   M+ 
Sbjct: 29  TPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRE 85

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
               PNLVTYN ++DA  K  +      ++   M+  G  P+ +TFNSL+   C RG + 
Sbjct: 86  RGCPPNLVTYNVLVDALCKLSM-VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNV- 143

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + AR L   MV +G+  ++ TY+ L+D +CK  +   A E++ EM A  ++P+  TYS +
Sbjct: 144 DDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSAL 203

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G  KA ++++A  M   M   G   D V Y++++  + K G+  EA    +EM     
Sbjct: 204 IHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRK 263

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC-VSPNLLTYSTLIDVYSKGGLYKEAM 494
             D VTYN ++ G  K GK  E + + +QM+    V P+++TYST+I+   K  +  EA 
Sbjct: 264 SPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQ 323

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++     +AG   DVV Y+ +ID LCK G +E A  LL  M + G  PNVVTY ++I   
Sbjct: 324 KLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGL 383

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI---IKVFGQLVAE 611
            ++      VD+ ER +                 ++++ AG   N +     V G  V+ 
Sbjct: 384 CKAR----KVDEAERVM-----------------EEMRNAGCPPNLVTYNTMVNGLCVSG 422

Query: 612 KAGQGKKENRCRQEILCILGVFQKMH--KLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
           +  + ++             + Q+M   + +  P+  T+  I+NA    +  ++A  LLE
Sbjct: 423 RIKEAQQ-------------LVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLE 469

Query: 670 EL 671
           ++
Sbjct: 470 QM 471



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 219/433 (50%), Gaps = 36/433 (8%)

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
           +G    A+ +   MK     P+  T+  +I A    G D    ++    M   G  P+ +
Sbjct: 3   AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAG-DLDGAMDHLRSM---GCDPNVV 58

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           T+ +L+A  +R    E A  L  EM  RG   ++ TYN L+DA+CK + +  A +++ +M
Sbjct: 59  TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
                +PNV+T+++++DG+ K G +DDA  +   M   G+  + V+Y+ ++    K  +F
Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 178

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
            EA  V +EM++SG+  DA TY+AL+ G  K  K +E  +M  +M     +P+++ YS++
Sbjct: 179 LEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSI 238

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG- 539
           I  + K G   EA +  +E ++     DVV Y+ +ID LCK G +  A  +LD+M + G 
Sbjct: 239 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGD 298

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           + P+VVTY+++I+   +S            D+  + +   LD MC        +AG   N
Sbjct: 299 VLPDVVTYSTVINGLCKS------------DMLVEAQKL-LDRMC--------KAGC--N 335

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
             +  +  ++      G+ E     E L      Q M +    PNVVT++ +++   +  
Sbjct: 336 PDVVTYTTIIDGLCKCGRLE---EAEYL-----LQGMKRAGCAPNVVTYTTLISGLCKAR 387

Query: 660 SFEDASMLLEELR 672
             ++A  ++EE+R
Sbjct: 388 KVDEAERVMEEMR 400


>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 829

 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 257/529 (48%), Gaps = 24/529 (4%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA------SAMISILGRLGKVDL 211
           D   L++ L + G W +A+  F + V      ++ G L         ++ ILGR  +  +
Sbjct: 145 DLVSLVKGLDDSGHWERAVFLFEWLV----LSSNSGALKLDHHVIEILVRILGRESQYSV 200

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + +    + Y   V A++ ++ AY R+G  ++AI++F  MK     P LVTYN ++D
Sbjct: 201 AAKLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILD 260

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
             GK G  ++ ++ + ++M   G++ D  T +++L+ C+R GL   A++ F E+   G +
Sbjct: 261 VFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYE 320

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
               TYN LL    K      A  ++ EM   N   + VTY+ ++  YA+AG   +A  +
Sbjct: 321 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVV 380

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
              M   G+  + ++Y TV+  Y K G+ +EAL +   M+ +G   +  TYNA+L   GK
Sbjct: 381 IEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGK 440

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           + + +E+ +M   MK++   PN  T++T++ +    G+ K   ++FRE K  G + D   
Sbjct: 441 KSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDT 500

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA---TTECTVDDVE 568
           ++ LI A  + G    A  +  EMT+ G    V TYN++++A  R     + E  + D++
Sbjct: 501 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 560

Query: 569 RDLGKQKESA-NLDAMCSQDDKDVQ-----EAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
               K  E++ +L   C     +       E G  + QI   +  L        K    C
Sbjct: 561 SKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFK----C 616

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           R  +      F    K   KP++V F+++L+  +R N ++ A  +L+ +
Sbjct: 617 RA-LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSI 664



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 222/448 (49%), Gaps = 50/448 (11%)

Query: 150 EFKLCGAD----DYTFLLRELGNRGEWSKAIQCFAFAVKREERKND---QGKLASAMISI 202
           E K CG +     Y  LL+  G  G +++A+     +V +E  +N+        + +++ 
Sbjct: 313 ELKSCGYEPGTVTYNALLQVFGKAGVYTEAL-----SVLKEMEENNCPADSVTYNELVAA 367

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
             R G    A  + E    +G       ++ +I AYG++G   EA+ +F SMK     PN
Sbjct: 368 YARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN 427

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
             TYNAV+   GK       ++++  DM  NG  P+R T+N++LA+C   G+ +    +F
Sbjct: 428 TCTYNAVLSMLGKKSRS-NEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVF 486

Query: 323 NEMVHRGIDQDIFTYNTLLDAICK-GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            EM   G + D  T+NTL+ A  + G+++D A ++  EM     +  V TY+ +++  A+
Sbjct: 487 REMKSCGFEPDRDTFNTLISAYGRCGSEVD-ASKMYGEMTRAGFNACVTTYNALLNALAR 545

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG------RFEEAL----------- 424
            G      N+ S+MK  G      SY+ +L  YAK G      R EE +           
Sbjct: 546 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWML 605

Query: 425 --------LVCKEMESS----------GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
                     C+ +  S          G + D V +N++L  + +   YD+   + + + 
Sbjct: 606 LRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIH 665

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            D ++P+L+TY++L+D+Y + G   +A +I +  +++ LK D+V Y+ +I   C+ GL++
Sbjct: 666 EDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQ 725

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            AV +L EMT+ GIRP + TYN+ +  +
Sbjct: 726 EAVRMLSEMTERGIRPCIFTYNTFVSGY 753



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 148/645 (22%), Positives = 265/645 (41%), Gaps = 119/645 (18%)

Query: 123 VVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFA 182
           ++  E+ + V A   D + L D +            YT +L      G++ KAI  F   
Sbjct: 191 ILGRESQYSVAAKLLDKIPLQDYM-------LDVRAYTTILHAYSRTGKYEKAINLF--- 240

Query: 183 VKREERKNDQGKLAS-----AMISILGRLGKV-DLAKNIFETALNEGYGNTVYAFSALIS 236
               ER  + G   +      ++ + G++G+       + E   ++G     +  S ++S
Sbjct: 241 ----ERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLS 296

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQ 296
           A  R G  +EA   F  +K    +P  VTYNA++   GK GV +   + +  +M  N   
Sbjct: 297 ACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGV-YTEALSVLKEMEENNCP 355

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
            D +T+N L+A  +R G  + A  +   M  +G+  +  TY T++DA  K  + D A ++
Sbjct: 356 ADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKL 415

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM------------------------- 391
              M      PN  TY+ ++    K  R ++ + M                         
Sbjct: 416 FYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGN 475

Query: 392 ----------FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
                     F EMK  G   DR ++NT++S Y + G   +A  +  EM  +G      T
Sbjct: 476 KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTT 535

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY------KEAM- 494
           YNALL    ++G +     +   MK+    P   +YS ++  Y+KGG Y      +E + 
Sbjct: 536 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGIN 595

Query: 495 --QIFRE--------------------------FKQAGLKADVVLYSALIDALCKNGLVE 526
             QIF                            FK+ G K D+V++++++    +N + +
Sbjct: 596 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD 655

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC-TVDDVERDLGKQKESANL----- 580
            A  +L  + ++G+ P++VTYNS++D + R    EC   +++ + L K +   +L     
Sbjct: 656 QAEGILQSIHEDGLNPDLVTYNSLMDMYVRRG--ECWKAEEILKTLEKSQLKPDLVSYNT 713

Query: 581 --DAMCSQDDKDVQEAGRTDNQI--------IKVFGQLVAEKAGQGKKENRCRQEILCIL 630
                C +    +QEA R  +++        I  +   V+     G            I 
Sbjct: 714 VIKGFCRKG--LMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGE--------IE 763

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 675
            V + M K   +PN +TF  +++   R   + +A   + +++ FD
Sbjct: 764 DVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFD 808



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 191/428 (44%), Gaps = 40/428 (9%)

Query: 249 SVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML----RNGVQPDRITFNS 304
           S F+S+K   L  +LV+    +D  G     ++  V +F+ ++       ++ D      
Sbjct: 132 SFFDSVKSELLTTDLVSLVKGLDDSGH----WERAVFLFEWLVLSSNSGALKLDHHVIEI 187

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L+ +  R   +  A  L +++  +    D+  Y T+L A  +  + + A  +   M    
Sbjct: 188 LVRILGRESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMG 247

Query: 365 ISPNVVTYSTMIDGYAKAGR-LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
            SP +VTY+ ++D + K GR     L +  EM+  G+  D  + +TVLS  A+ G   EA
Sbjct: 248 PSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREA 307

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
                E++S G     VTYNALL  +GK G Y E   + ++M+ +    + +TY+ L+  
Sbjct: 308 KDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAA 367

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y++ G  KEA  +     Q G+  + + Y+ +IDA  K G  + A+ L   M + G  PN
Sbjct: 368 YARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN 427

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
             TYN+++   G+                K + +  +  +C            T N I+ 
Sbjct: 428 TCTYNAVLSMLGK----------------KSRSNEMIKMLCDMKSNGCFPNRATWNTILA 471

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           + G       G  K  NR          VF++M     +P+  TF+ +++A  RC S  D
Sbjct: 472 LCGN-----KGMDKFVNR----------VFREMKSCGFEPDRDTFNTLISAYGRCGSEVD 516

Query: 664 ASMLLEEL 671
           AS +  E+
Sbjct: 517 ASKMYGEM 524



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 121/292 (41%), Gaps = 39/292 (13%)

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF----KQAGLKADVVLYSALID 517
           F+ +K++ ++ +L++   L+      G ++ A+ +F           LK D  +   L+ 
Sbjct: 134 FDSVKSELLTTDLVS---LVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHHVIEILVR 190

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            L +      A  LLD++  +    +V  Y +I+ A+ R+   E  ++  ER     KE 
Sbjct: 191 ILGRESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFER----MKEM 246

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
                +             T N I+ VFG     K G+  ++         ILGV ++M 
Sbjct: 247 GPSPTLV------------TYNVILDVFG-----KMGRSWRK---------ILGVLEEMR 280

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWV 695
              +K +  T S +L+AC+R     +A     EL+    +   V +  L+    +  ++ 
Sbjct: 281 SKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYT 340

Query: 696 QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN 747
           +ALS+  E++  +    S  YN L       G  + A +V+    ++ V  N
Sbjct: 341 EALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPN 392


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 243/473 (51%), Gaps = 29/473 (6%)

Query: 219 ALNEGY---GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
           +L E Y    +T   F  ++ +Y R     +A+S+ +  + +   P +++YNAV+DA  +
Sbjct: 122 SLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIR 181

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
              +      +F +ML++ V P+  T+N L+      G  + A   F+ M  +G   ++ 
Sbjct: 182 SKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVV 241

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYNTL+D  CK  ++D  FE++  M  K + PN+++Y+ +I+G  + GR+ +   + +EM
Sbjct: 242 TYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEM 301

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G  LD V+YNT++  Y K G F +AL++  EM   G+    +TY +L+    K G  
Sbjct: 302 NKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNM 361

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           +      +QM+   + PN  TY+TL+D +S+ G   EA ++ +E    G    VV Y+AL
Sbjct: 362 NRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNAL 421

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           I+  C  G +  A+++L++M ++G+ P+VV+Y++++  F RS   +  +    + + K  
Sbjct: 422 INGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGI 481

Query: 576 E------SANLDAMCSQDDKDVQEAGRTDNQIIKV--------FGQLVAEKAGQGKKENR 621
           +      S+ +   C Q  +  +EA    +++++V        +  L+     +G  +  
Sbjct: 482 KPDTITYSSLIQGFCEQ--RRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKA 539

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
                   + +  +M +  + P+VVT+S ++N  ++     +A  LL  L+LF
Sbjct: 540 --------IQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLL--LKLF 582



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 193/354 (54%), Gaps = 1/354 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +D+A   F+    +G    V  ++ LI  Y +     +   +  SM    L+PNL++Y
Sbjct: 219 GNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISY 278

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N VI+   + G   K +  +  +M + G   D +T+N+L+    + G +  A  +  EM+
Sbjct: 279 NVVINGLCREG-RMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G+   + TY +L+ ++CK   M+ A E + +M  + + PN  TY+T++DG+++ G ++
Sbjct: 338 RHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A  +  EM   G     V+YN +++ +   G+  +A+ V ++M+  G+  D V+Y+ +L
Sbjct: 398 EAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVL 457

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G+ +    DE  R+  +M A  + P+ +TYS+LI  + +    KEA  +F E  + GL 
Sbjct: 458 SGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLP 517

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            D   Y+ALI+A C  G ++ A+ L +EM ++G+ P+VVTY+ +I+   + A T
Sbjct: 518 PDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQART 571



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 207/396 (52%), Gaps = 7/396 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILG--RLGKVDLAKNIF 216
           Y  L+R     G    A++ F     R E+K     + +    I G  +L K+D    + 
Sbjct: 208 YNILIRGFCLAGNLDVALRFF----DRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELL 263

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
            +   +G    + +++ +I+   R G  +E   V   M +     + VTYN +I    K 
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKE 323

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G +F   + +  +MLR+G+ P  IT+ SL+    + G    A    ++M  RG+  +  T
Sbjct: 324 G-NFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERT 382

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y TL+D   +   M+ A+ ++ EM     SP+VVTY+ +I+G+  AG++ DA+ +  +MK
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMK 442

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  D VSY+TVLS + +    +EAL V ++M + GI+ D +TY++L+ G+ +Q +  
Sbjct: 443 EKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E   +F++M    + P+  TY+ LI+ Y   G  ++A+Q+  E  + G+  DVV YS LI
Sbjct: 503 EACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLI 562

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           + L K      A  LL ++  E   P+ VTY+++I+
Sbjct: 563 NGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIE 598



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 173/353 (49%), Gaps = 18/353 (5%)

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
           L  G   +V  +++LI +  ++G    A    + M+   L PN  TY  ++D   + G  
Sbjct: 337 LRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGY- 395

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                 +  +M+ NG  P  +T+N+L+   C  G + +A   +  +M  +G+  D+ +Y+
Sbjct: 396 MNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIA-VLEDMKEKGLTPDVVSYS 454

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           T+L   C+   +D A  +  +M AK I P+ +TYS++I G+ +  R  +A ++F EM  +
Sbjct: 455 TVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRV 514

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D  +Y  +++ Y   G  ++A+ +  EM   G+  D VTY+ L+ G  KQ +  E 
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREA 574

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYS-----------KG----GLYKEAMQIFREFKQA 503
           +R+  ++  +   P+ +TY TLI+  S           KG    G+  EA Q+F    + 
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEK 634

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             K D   Y+ +I   C+ G +  A SL  EM K G   + VT  +++    +
Sbjct: 635 NHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHK 687



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/398 (23%), Positives = 171/398 (42%), Gaps = 55/398 (13%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  +   G  ++A +       R    N+  +  + ++    + G ++ A  + + 
Sbjct: 348 YTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNE--RTYTTLVDGFSQKGYMNEAYRVLKE 405

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            ++ G+  +V  ++ALI+ +  +G   +AI+V   MK   L P++V+Y+ V+    +   
Sbjct: 406 MIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRS-Y 464

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           D    + +   M+  G++PD IT++SL+   C +    EA  +LF+EM+  G+  D FTY
Sbjct: 465 DVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEAC-DLFDEMLRVGLPPDEFTY 523

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA----LNMFS 393
             L++A C    +  A ++  EM  K + P+VVTYS +I+G  K  R  +A    L +F 
Sbjct: 524 TALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFY 583

Query: 394 E--------------------------------MKFLGIGLDRV--------------SY 407
           E                                MK +    D+V              +Y
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAY 643

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N ++  + + G   +A  + KEM  SG     VT  AL+    K+GK +E+  +   +  
Sbjct: 644 NVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLR 703

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
            C          L+++  + G     + +  E  + G 
Sbjct: 704 SCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741


>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Cucumis sativus]
 gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Cucumis sativus]
          Length = 720

 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 200/374 (53%), Gaps = 5/374 (1%)

Query: 186 EERKNDQGKLASAMIS--ILG--RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
           EE ++D+ +L   +++  ILG  + G  + A          G       F A+ISA G  
Sbjct: 270 EEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNH 329

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
           G  +EA ++F  MK   LKP +  +NA++    + G   K    I  +M ++G+ PD  T
Sbjct: 330 GRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKG-SLKEAESIISEMEKSGLSPDEHT 388

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           +  L+   +  G WE+AR+L  +M  R +  + F ++ +L +     +    FE++ EM 
Sbjct: 389 YGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMK 448

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
             N+ P+   Y+ MID + K   LD A+  +  M   GI  D V++NT++  + K G  +
Sbjct: 449 NSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHD 508

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
            A  + +EM+  G      TYN ++   G+Q K+DEV+ +  +M++  + PN++TY+TL+
Sbjct: 509 RAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLV 568

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           D+Y   G + +A+      K AGLK    +Y+ALI+A  + GL E AV+    M  +G+R
Sbjct: 569 DIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLR 628

Query: 542 PNVVTYNSIIDAFG 555
           P+++  NS+I+AFG
Sbjct: 629 PSLLALNSLINAFG 642



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 189/359 (52%), Gaps = 1/359 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+IS LG  G+ + A+ IFE     G    + AF+AL+  Y R G  +EA S+ + M++ 
Sbjct: 321 AVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKS 380

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            L P+  TY  ++DA    G  ++    +   M    VQP+   F+ +LA     G W+ 
Sbjct: 381 GLSPDEHTYGLLVDAYANVG-RWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQK 439

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
              +  EM +  +  D   YN ++D   K   +D A E    M ++ I P+VVT++T+ID
Sbjct: 440 TFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLID 499

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            + K G  D A  +F EM+  G      +YN +++   +  +++E  ++  +M+S G+  
Sbjct: 500 CHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLP 559

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + VTY  L+  YG  G++++     E MK+  + P+   Y+ LI+ +++ GL ++A+  +
Sbjct: 560 NVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAY 619

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           R     GL+  ++  ++LI+A  ++     A S+L  M +  ++P+VVTY +++ A  R
Sbjct: 620 RVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIR 678



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 221/492 (44%), Gaps = 34/492 (6%)

Query: 197 SAMISILGRLGKVD--LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           S +I  L R  K+D  L + ++E   ++         + +I  + ++G    A+   + +
Sbjct: 248 SLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMV 307

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           +   L P   T+ AVI A G  G   +    IF++M   G++P    FN+LL   +R G 
Sbjct: 308 QASGLNPKTSTFVAVISALGNHGRT-EEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGS 366

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            + A ++ +EM   G+  D  TY  L+DA     + + A  ++ +M A+N+ PN   +S 
Sbjct: 367 LKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSR 426

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++  Y   G       +  EMK   +  DR  YN ++  + K    + A+     M S G
Sbjct: 427 ILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEG 486

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I  D VT+N L+  + K G +D    +FE+M+     P   TY+ +I+   +   + E  
Sbjct: 487 IEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVK 546

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +  + +  GL  +VV Y+ L+D    +G    A+  L+ M   G++P+   YN++I+AF
Sbjct: 547 ILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAF 606

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            +   +E  V+   R +       +L A+               N +I  FG        
Sbjct: 607 AQRGLSEQAVN-AYRVMISDGLRPSLLAL---------------NSLINAFG-------- 642

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
               E+R   E   IL   Q M +  +KP+VVT++ ++ A  R + F+    + EE+ L 
Sbjct: 643 ----EDRRDIEAFSIL---QYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILS 695

Query: 675 DNQVYGVAHGLL 686
                G A  +L
Sbjct: 696 GCTPDGKARAML 707



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 168/321 (52%), Gaps = 5/321 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++     +G+ + A+++ +           + FS ++++Y   G  Q+   V   MK  N
Sbjct: 392 LVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSN 451

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           +KP+   YN +ID  GK      H +E +D ML  G++PD +T+N+L+    + G  + A
Sbjct: 452 VKPDRHFYNVMIDTFGKFNC-LDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRA 510

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             LF EM  RG      TYN +++++ +  + D    ++ +M ++ + PNVVTY+T++D 
Sbjct: 511 AELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDI 570

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y  +GR +DA++    MK  G+      YN +++ +A+ G  E+A+   + M S G+R  
Sbjct: 571 YGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPS 630

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            +  N+L+  +G+  +  E   + + MK + V P+++TY+TL+    +   + +   ++ 
Sbjct: 631 LLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYE 690

Query: 499 EFKQAGL----KADVVLYSAL 515
           E   +G     KA  +L SAL
Sbjct: 691 EMILSGCTPDGKARAMLRSAL 711



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/467 (24%), Positives = 206/467 (44%), Gaps = 85/467 (18%)

Query: 249 SVFNSMKRYNLKPNL-VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA 307
           +V + ++R+NL  +  + Y+ +I A G+     + + E F    +  + P  +T+N+L+ 
Sbjct: 164 AVVSWLQRHNLCFSYELLYSILIHALGRS----EKLYEAFILSQKQTLTP--LTYNALIG 217

Query: 308 VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAF--EIMAEMPAKNI 365
            C+R    E A NL + M   G   D   Y+ ++ ++ +  ++D+    ++  E+ +  I
Sbjct: 218 ACARNNDLEKALNLMSRMRQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKI 277

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
             + +  + +I G+AKAG  + AL   S ++  G+     ++  V+S     GR EEA  
Sbjct: 278 ELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEA 337

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQ--------------------------------- 452
           + +EM+  G++     +NALL GY ++                                 
Sbjct: 338 IFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYA 397

Query: 453 --GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
             G+++  R + +QM+A  V PN   +S ++  Y   G +++  ++ RE K + +K D  
Sbjct: 398 NVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRH 457

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y+ +ID   K   ++ A+   D M  EGI P+VVT+N++ID                R 
Sbjct: 458 FYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDC--------------HRK 503

Query: 571 LGKQKESANLDAMCSQDDKDVQEAG-----RTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
            G    +A L        +++QE G      T N +I   G            E     E
Sbjct: 504 HGYHDRAAEL-------FEEMQERGYLPCPTTYNIMINSLG------------EQEKWDE 544

Query: 626 ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           +  +LG   KM    + PNVVT++ +++       F DA   LE ++
Sbjct: 545 VKILLG---KMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMK 588


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 264/533 (49%), Gaps = 41/533 (7%)

Query: 171 EWSKAIQCFAFAVK--------REERKNDQGKLASAMISILGRLGKVD-LAKNIFETALN 221
           +W+++ Q F+F  K        R +       LA  ++     +  VD   +++F+   N
Sbjct: 69  DWARSQQFFSFQCKCLALHILTRYKLYKTAQSLAEEVV-----VNTVDETGEDLFQCLKN 123

Query: 222 EGY--GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
             Y   ++   F  ++ +  R     +A+S+ N  K Y   P +++YNA++DA  +    
Sbjct: 124 SYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQS 183

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            K    IF +M+ +GV P+  T+N L+   C+ G L E     F EM   G   ++ TYN
Sbjct: 184 VKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNL-EMGLFFFGEMERNGCLPNVVTYN 242

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           T++DA CK  ++  AF+++  M  K ++PN+++Y+ +I+G  + G++ +   +  EM   
Sbjct: 243 TIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKR 302

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
               DRV++NT+++ Y  +G F +AL++  EM  +G+  + VTY  L+    K G  +  
Sbjct: 303 RYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA 362

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
               +QM+   + PN  TY+TLID +S+ G  K+A QI +E  + G    ++ Y+ALI+ 
Sbjct: 363 MEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALING 422

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE----CTVDDVERDLGKQ 574
            C  G +E A  LL EM + G  P+VV+Y++II  F R+   E      V+ V + +   
Sbjct: 423 HCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPD 482

Query: 575 --KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
               S+ +  +C Q         R   ++  +F ++++      +          CI G 
Sbjct: 483 VATYSSLIQGLCKQ---------RRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533

Query: 633 FQKMHKLK-------IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
             K  +L          P++VT++ ++N  ++ +  ++A  LL +L L++  V
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL-LYEESV 585



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 171/339 (50%), Gaps = 21/339 (6%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    V  ++ LI++  ++G    A+   + M+   L PN  TY  +ID   + G   K 
Sbjct: 338 GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF-LKQ 396

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             +I  +M+ NG  P  IT+N+L+      G  E A  L  EM+ RG   D+ +Y+T++ 
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
             C+  +++ AF++  EM AK ISP+V TYS++I G  K  RL +  ++F EM  LG+  
Sbjct: 457 GFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPP 516

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D V+Y ++++ Y   G  ++AL +  EM   G   D VTYN L+ G+ KQ +  E +R+ 
Sbjct: 517 DEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            ++  +   PN +TY+TLID  +             EFK A          AL+   C  
Sbjct: 577 LKLLYEESVPNEITYNTLIDNCNN-----------LEFKSA---------LALMKGFCMK 616

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           GL+  A  +L+ M ++G + N   YN II    +    E
Sbjct: 617 GLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIE 655



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 193/415 (46%), Gaps = 73/415 (17%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           V +A+ IF+  +  G    VY ++ LI  +  +G  +  +  F  M+R    PN+VTYN 
Sbjct: 184 VKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNT 243

Query: 269 VIDA------------------------------------CGKGGVDFKHVVEIFDDMLR 292
           +IDA                                    C +G    K   EI ++M +
Sbjct: 244 IIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREG--QMKETSEILEEMSK 301

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD- 351
               PDR+TFN+L+      G +  A  L  EMV  G+  ++ TY TL++++CK   ++ 
Sbjct: 302 RRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNR 361

Query: 352 ----------------------------------LAFEIMAEMPAKNISPNVVTYSTMID 377
                                              A++IM EM     +P ++TY+ +I+
Sbjct: 362 AMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALIN 421

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+   GR++DA  +  EM   G   D VSY+T++S + +    E+A  +  EM + GI  
Sbjct: 422 GHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISP 481

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  TY++L+ G  KQ +  EV  +F++M +  + P+ +TY++LI+ Y   G   +A+++ 
Sbjct: 482 DVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLH 541

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            E  Q G   D+V Y+ LI+   K    + A  LL ++  E   PN +TYN++ID
Sbjct: 542 DEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID 596



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 151/316 (47%), Gaps = 18/316 (5%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           LG+++ A  + +  +  G+   V ++S +IS + R+   ++A  +   M    + P++ T
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNE 324
           Y+++I    K       V ++F +ML  G+ PD +T+ SL+ A C  G L +A R L +E
Sbjct: 486 YSSLIQGLCKQR-RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR-LHDE 543

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID------- 377
           M+ +G   DI TYN L++   K ++   A  ++ ++  +   PN +TY+T+ID       
Sbjct: 544 MIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEF 603

Query: 378 --------GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
                   G+   G +++A  +   M   G  L+   YN ++  ++K+G  E+A  + KE
Sbjct: 604 KSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKE 663

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M  SG    +VT  AL      +GK  E+ ++ +     C          LI + SK G 
Sbjct: 664 MLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGN 723

Query: 490 YKEAMQIFREFKQAGL 505
                 + ++   +GL
Sbjct: 724 MDAVFNVLKDMALSGL 739


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 148/515 (28%), Positives = 251/515 (48%), Gaps = 8/515 (1%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           L   L + G   +AIQCF+  +KR  R   + +  + ++    +LGK D  K  F+  + 
Sbjct: 198 LFSVLIDLGMLEEAIQCFS-KMKRF-RVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIG 255

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
            G   TV+ ++ +I    + G  + A  +F  MK   L P+ VTYN++ID  GK G    
Sbjct: 256 AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG-RLD 314

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             V  F++M     +PD IT+N+L+    + G        + EM   G+  ++ +Y+TL+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           DA CK   M  A +   +M    + PN  TY+++ID   K G L DA  + +EM  +G+ 
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + V+Y  ++       R +EA  +  +M+++G+  +  +YNAL+ G+ K    D    +
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
             ++K   + P+LL Y T I         + A  +  E K+ G+KA+ ++Y+ L+DA  K
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER---DLGKQKESA 578
           +G     + LLDEM +  I   VVT+  +ID   ++      VD   R   D G Q  +A
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614

Query: 579 NLDAMCSQDDKDVQ-EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKM 636
              AM     KD Q EA  T  + +   G +    A     +   +Q  +L  L +  KM
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            ++ +K +++ +++++   S CN  + A   LEE+
Sbjct: 675 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 194/427 (45%), Gaps = 74/427 (17%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI   G++G++D     FE   +      V  ++ALI+ + + G     +  +  MK 
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             LKPN+V+Y+ ++DA  K G+  +  ++ + DM R G+ P+  T+ SL+ A C  G L 
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGM-MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 419

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +A R L NEM+  G++ ++ TY  L+D +C   +M  A E+  +M    + PN+ +Y+ +
Sbjct: 420 DAFR-LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478

Query: 376 IDGYAKAGRLDDALNMFSE-----------------------------------MKFLGI 400
           I G+ KA  +D AL + +E                                   MK  GI
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMES---------------------------- 432
             + + Y T++  Y K G   E L +  EM+                             
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598

Query: 433 --------SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
                    G++ +A  + A++ G  K  + +    +FEQM    + P+   Y++L+D  
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            K G   EA+ +  +  + G+K D++ Y++L+  L     ++ A S L+EM  EGI P+ 
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718

Query: 545 VTYNSII 551
           V   S++
Sbjct: 719 VLCISVL 725



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/411 (23%), Positives = 172/411 (41%), Gaps = 70/411 (17%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+   + GK+ +    +      G    V ++S L+ A+ + G  Q+AI  +  M+R
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395

Query: 257 YNLKPNLVTYNAVIDA-CGKG---------------GVDF------------------KH 282
             L PN  TY ++IDA C  G               GV++                  K 
Sbjct: 396 VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE 455

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             E+F  M   GV P+  ++N+L+    +    + A  L NE+  RGI  D+  Y T + 
Sbjct: 456 AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            +C   +++ A  +M EM    I  N + Y+T++D Y K+G   + L++  EMK L I +
Sbjct: 516 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 575

Query: 403 DRVSYNTVL-----------------------------SIYAKL-------GRFEEALLV 426
             V++  ++                             +I+  +        + E A  +
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            ++M   G+  D   Y +L+ G  KQG   E   + ++M    +  +LL Y++L+   S 
Sbjct: 636 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 695

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
               ++A     E    G+  D VL  +++    + G ++ AV L   + K
Sbjct: 696 CNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746


>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1429

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 153/581 (26%), Positives = 282/581 (48%), Gaps = 34/581 (5%)

Query: 4   TPPHCSITATKPYQNHQYPHNHLKNNHHRQSHHPSSRPHWTSHKVSLTKPPLSPSPRN-- 61
           + P    + ++   + ++PH  L ++         + PH   H  S       PSP    
Sbjct: 11  SSPSKKFSYSRASPSIRWPHLKLSDS--------CTSPHTQFHIAS-------PSPTQFF 55

Query: 62  APKPAATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRH 121
              P + S   +P      S+     S+  L     GR S   V KM+    K A   R 
Sbjct: 56  DEMPESESDNKSPKLGALESVEVDDESQERL-----GRLSRTRVKKMNKLALKRAKDWRE 110

Query: 122 SVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAF 181
            V   + L       R D  + D+L   + ++   D + F+++ +G    W +A++ F +
Sbjct: 111 RV---KFLTDRILGLRPDQFVADVLDDSKVQMTPTD-FCFVVKWVGQEN-WQRALEVFEW 165

Query: 182 AVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
              R     +   LA+ ++++LG+  +  LA  IF  A      NTV  ++A++  Y R+
Sbjct: 166 LNLRHWYSPNARMLAT-ILAVLGKANQEALAVEIFIRA-ESTVDNTVQVYNAMMGVYART 223

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV-VEIFDDMLRNGVQPDRI 300
           G   +   + + M+    +P+LV++N +I+A  K G    +V +E+ +++ R+G++PD I
Sbjct: 224 GRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLRPDII 283

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           T+N+L++ CSR    E A  +F++M       D++TYN ++    +      A ++  E+
Sbjct: 284 TYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKEL 343

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
            +K   P+ VTY++++  +A+ G +D    + +EM  +G   D ++YNT++ +Y K G+ 
Sbjct: 344 ESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQH 403

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
             AL + ++M+ SG   DA+TY  L+   GK  K  E   +  +M    V P L TYS L
Sbjct: 404 GLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSAL 463

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I  Y++ G   EA + F   +++G++ D + YS ++D   +      A+ L  EM ++GI
Sbjct: 464 ICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGI 523

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
            P+   Y +++   GR    E  V+D++R +   +E   ++
Sbjct: 524 TPDPTVYGAMLRNLGR----ENKVEDIQRIIRDMEEVCGMN 560



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 171/344 (49%), Gaps = 8/344 (2%)

Query: 202 ILGRLGKVDLAKNIFETALNE----GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           I  RL    +  N+    LNE    G    +  ++ LISA  R    +EA+ VF+ M+ +
Sbjct: 252 INARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAH 311

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             +P+L TYNA+I   G+ G   K   ++F ++   G  PD +T+NSLL   +R G  + 
Sbjct: 312 YCQPDLWTYNAMISVYGRCGFSGK-AEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDK 370

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
            + + NEMV  G  +D  TYNT++    K  Q  LA ++  +M     +P+ +TY+ +ID
Sbjct: 371 VKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLID 430

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
              KA ++ +A N+ SEM  +G+     +Y+ ++  YA+ G+  EA      M  SGIR 
Sbjct: 431 SLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRP 490

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D + Y+ +L  + +  +  +   ++ +M  D ++P+   Y  ++    +    ++  +I 
Sbjct: 491 DQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRII 550

Query: 498 REFKQAGLKADVVLYSALIDALCKN---GLVESAVSLLDEMTKE 538
           R+ ++        + S L+   C     G++  A+S  DE+  E
Sbjct: 551 RDMEEVCGMNPQAIASILVKGECYEDAAGMLRLAISGSDEIDSE 594



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 151/682 (22%), Positives = 277/682 (40%), Gaps = 83/682 (12%)

Query: 195  LASAMISILGRLGKVDLAKNIFETALNEGYG-NTVYAFSALISAYGRSGYCQEAISVFNS 253
            L  +M+ +  ++G  + A  + + A  EG   + +    A+I  YG+    Q+A S+  +
Sbjct: 701  LYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVAVIETYGKLKLWQKAESLVGN 760

Query: 254  MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            +++     +   +NA+I A    G  ++    +F+ M+R+G  P   + N LL      G
Sbjct: 761  LRQRCTNVDRKVWNALIQAYAASGC-YEQARAVFNTMMRDGPSPTVDSINGLLQALIVDG 819

Query: 314  LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
              E    +  E+   G      +   +LDA  + + +  A +I   M A    P +  Y 
Sbjct: 820  RLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYR 879

Query: 374  TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
             MI    K  R+ D   M +EM+  G   D   +N++L +Y  +  F + + + + ++  
Sbjct: 880  IMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKED 939

Query: 434  GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            G++ D  TYN L+  Y +  + +E   +  +M+   + P L TY +LI  + K  L  +A
Sbjct: 940  GLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDA 999

Query: 494  MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             ++F E    G K D   Y  ++     +G    A  LL  M   G+ P + T + ++ +
Sbjct: 1000 EELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVS 1059

Query: 554  FGRSATTECTVDDVERDLGKQKE----------SANLDAMCSQDDKDVQEAGRTDNQIIK 603
            +G S   +    + E+ L   KE          S+ +DA     D  V            
Sbjct: 1060 YGSSGQPQ----EAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVG----------- 1104

Query: 604  VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
                   +K  + KKE                     ++P+   ++  + A S      D
Sbjct: 1105 ------IQKLVEMKKEG--------------------LEPDHRIWTCFIRAASLSEHTHD 1138

Query: 664  ASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
            A +LL+ L+   +  + +   L+    D++ ++     + ++ M+ + A  F NAL D+L
Sbjct: 1139 AILLLQALQ---DSGFDLPSRLITERSDSLVLEVDHCLEMLETMEDNAAFNFVNALEDLL 1195

Query: 724  WHFGQKRGAQLVVLEGKRRQVW--------ENVWSESCLDLHLMSSGAARAMVHAWLLNI 775
            W F  +  A  V     +R ++        E  W     D   +S GAA           
Sbjct: 1196 WAFELRATASWVFRLAVKRSIYCHDVFRVAEQDWGA---DFRKLSGGAA----------- 1241

Query: 776  HSIVFEGHEL-PKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFIS 834
                 +G+   PK + ++TG  +++ V  D  L+      L  MG+PF       G  ++
Sbjct: 1242 LDASLQGYPASPKSVVLITGTAEYNMVSLDNTLK----ACLWEMGSPFLPCRTRSGLLVA 1297

Query: 835  TGPMVASWLRESGTLKVLVLHD 856
                +  WL++S     L L D
Sbjct: 1298 KAHSLRMWLKDSPFCLDLELKD 1319



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 151/321 (47%), Gaps = 34/321 (10%)

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           T+L  + K  Q  LA EI     +  +   V  Y+ M+  YA+ GR +    M   M+  
Sbjct: 181 TILAVLGKANQEALAVEIFIRAES-TVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRER 239

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEE--ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
           G   D VS+NT+++   K G      A+ +  E+  SG+R D +TYN L+    ++   +
Sbjct: 240 GCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLE 299

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E  ++F+ M+A    P+L TY+ +I VY + G   +A Q+F+E +  G   D V Y++L+
Sbjct: 300 EAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLL 359

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
            A  + G V+    + +EM + G   + +TYN+II  +G+                    
Sbjct: 360 YAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQ----------------- 402

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
                 +  Q  +D++ +GRT + I      ++ +  G+  K       ++    V  +M
Sbjct: 403 ----HGLALQLYRDMKLSGRTPDAITYT---VLIDSLGKANK-------MVEAANVMSEM 448

Query: 637 HKLKIKPNVVTFSAILNACSR 657
             + +KP + T+SA++   +R
Sbjct: 449 LNIGVKPTLRTYSALICGYAR 469



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 106/517 (20%), Positives = 207/517 (40%), Gaps = 69/517 (13%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++    R G VD  K I    +  G+      ++ +I  YG+ G    A+ ++  MK 
Sbjct: 356 NSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKL 415

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+ +TY  +ID+ GK          +  +ML  GV+P   T+++L+   +R G   
Sbjct: 416 SGRTPDAITYTVLIDSLGKAN-KMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRL 474

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A   F+ M   GI  D   Y+ +LD   +  +   A  +  EM    I+P+   Y  M+
Sbjct: 475 EAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAML 534

Query: 377 DGYAKAGRLDDALNMFSEMKFL--------------------GIGLDRVSYNTVLSIYAK 416
               +  +++D   +  +M+ +                      G+ R++ +    I ++
Sbjct: 535 RNLGRENKVEDIQRIIRDMEEVCGMNPQAIASILVKGECYEDAAGMLRLAISGSDEIDSE 594

Query: 417 -----------LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
                       GR  EAL + + ++    + + +   A +    K  + D   + +   
Sbjct: 595 NLLSILSSYSSSGRQAEALDLLQFLKGHVSKSNQLVAEASIVTLCKAKQLDAALKEYNDT 654

Query: 466 KA-DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           +  D  + +   Y +LI    +     EA QIF + +  G+K    LY +++   CK G 
Sbjct: 655 REFDWFTGSCTMYESLIQCCEENEFTAEASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGF 714

Query: 525 VESAVSLLDEMTKEGIRPNVVTYN-SIIDAFGRSATTECTVDDVERDLGKQKES--ANLD 581
            E+A  L+D    EG+  + ++ + ++I+ +G+              L ++ ES   NL 
Sbjct: 715 PETAHYLIDLAEIEGMPFDKISIDVAVIETYGKLK------------LWQKAESLVGNLR 762

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
             C+  D+             KV+  L+   A  G     C ++      VF  M +   
Sbjct: 763 QRCTNVDR-------------KVWNALIQAYAASG-----CYEQ---ARAVFNTMMRDGP 801

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
            P V + + +L A       E+  ++ +E++    Q+
Sbjct: 802 SPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQI 838


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 138/530 (26%), Positives = 254/530 (47%), Gaps = 36/530 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S   S + R  + +L  +  +     G  + +Y  + +I+ + R      A SV   + +
Sbjct: 92  SRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMK 151

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              +P+  T+N +I+  C +G V     V + D M+ NG QPD +T+NS++    R G  
Sbjct: 152 LGYEPDTTTFNTLINGLCLEGKV--SKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDT 209

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A ++  +M  R +  D+FTY+T++D++C+   +D A  +  EM  K I  +VVTY+++
Sbjct: 210 SLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G  KAG+ +D   +  +M    I  + +++N +L ++ K G+ +EA  + KEM + GI
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + +TYN L+ GY  Q +  E   M + M  +  SP+++T+++LI  Y       + M+
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +FR   + GL A+ V YS L+   C++G ++ A  L  EM   G+ P+V+TY  ++D   
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
            +   E  ++  E DL K K                          I ++  ++      
Sbjct: 450 DNGKLEKALEIFE-DLQKSKMDLG----------------------IVMYTTIIEGMCKG 486

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 675
           GK E+           +F  +    +KPNV+T++ +++   +  S  +A++LL ++    
Sbjct: 487 GKVEDA--------WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538

Query: 676 NQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
           N      +  L+    RD     +  L +E+K    S  ++    + DML
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 195/396 (49%), Gaps = 7/396 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           Y  ++  +   G+ S A   F    K EER         S +I  L R G +D A ++F+
Sbjct: 196 YNSIVNGICRSGDTSLA---FDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
               +G  ++V  +++L+    ++G   +   +   M    + PN++T+N ++D   K G
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
              +   E++ +M+  G+ P+ IT+N+L+   C +  L EA  N+ + MV      DI T
Sbjct: 313 -KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA-NNMLDLMVRNKCSPDIVT 370

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           + +L+   C   ++D   ++   +  + +  N VTYS ++ G+ ++G++  A  +F EM 
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  D ++Y  +L      G+ E+AL + ++++ S +    V Y  ++ G  K GK +
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           +   +F  +    V PN++TY+ +I    K G   EA  + R+ ++ G   +   Y+ LI
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            A  ++G + ++  L++EM   G   +  +   +ID
Sbjct: 551 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 191/400 (47%), Gaps = 12/400 (3%)

Query: 139 DVSLG-DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL 195
           D SL  D+L+K E +   AD +T+  ++  L   G    AI  F    K  E K  +  +
Sbjct: 208 DTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF----KEMETKGIKSSV 263

Query: 196 AS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
            +  +++  L + GK +    + +  ++      V  F+ L+  + + G  QEA  ++  
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M    + PN++TYN ++D  C +          + D M+RN   PD +TF SL+      
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQN--RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              +    +F  +  RG+  +  TY+ L+   C+  ++ LA E+  EM +  + P+V+TY
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
             ++DG    G+L+ AL +F +++   + L  V Y T++    K G+ E+A  +   +  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G++ + +TY  ++ G  K+G   E   +  +M+ D  +PN  TY+TLI  + + G    
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           + ++  E K  G  AD      +ID L    L +S + +L
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDML 601



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/469 (21%), Positives = 209/469 (44%), Gaps = 51/469 (10%)

Query: 276 GGVDFKH--VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G VD K    + +F +M+R+   P  + F+   +  +R   +    +   ++   GI  +
Sbjct: 63  GIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHN 122

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           I+T N +++  C+  +   A+ ++ ++      P+  T++T+I+G    G++  A+ +  
Sbjct: 123 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVD 182

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M   G   D V+YN++++   + G    A  + ++ME   ++ D  TY+ ++    + G
Sbjct: 183 RMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDG 242

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
             D    +F++M+   +  +++TY++L+    K G + +   + ++     +  +V+ ++
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            L+D   K G ++ A  L  EM   GI PN++TYN+++D +                  +
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ--------------NR 348

Query: 574 QKESAN-LDAM----CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
             E+ N LD M    CS D         T   +IK  G  + ++   G K          
Sbjct: 349 LSEANNMLDLMVRNKCSPDIV-------TFTSLIK--GYCMVKRVDDGMK---------- 389

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVYGVAHG 684
              VF+ + K  +  N VT+S ++    +    + A  L +E+     L D   YG+   
Sbjct: 390 ---VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI--- 443

Query: 685 LLMGYRDNIWVQ-ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
           LL G  DN  ++ AL +F++++          Y  + + +   G+   A
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  209 bits (531), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 251/503 (49%), Gaps = 49/503 (9%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV----DFKHVVEI 286
           F  ++ +  R G+  +A+++ +   R+   P +++YNAV+DA  +       D+     +
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERV 194

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           F DM+RNGV P+  T+N ++  V S+G L E       +M   GI  ++ TYNTL+DA C
Sbjct: 195 FRDMVRNGVSPNVYTYNVIIRGVVSQGDL-EKGLGFMRKMEKEGISPNVVTYNTLIDASC 253

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  ++  A  ++  M    ++ N+++Y+++I+G    GR+ +   +  EM+  G+  D V
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEV 313

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +YNT+++ + K G   + L++  EM   G+  + VTY  L+    K G       +F+QM
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM 373

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           +   + PN  TY+TLID + + GL  EA ++  E   +G    VV Y+AL+   C  G V
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           + AV +L  M + G+ P+VV+Y+++I  F R           ER+LGK            
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTVIAGFCR-----------ERELGK----------AF 472

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC-RQEILCILGVFQKMHKLKIKPN 644
           Q  +++ E G   + +   +  L+         +  C +Q+++    +F++M +  + P+
Sbjct: 473 QMKEEMVEKGVLPDTV--TYSSLI---------QGLCLQQKLVEAFDLFREMMRRGLPPD 521

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGV-AHGLLMGYRDNIWVQ-AL 698
            VT+++++NA         A  L +E+     L DN  Y V  +GL    R  +  +  L
Sbjct: 522 EVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLL 581

Query: 699 SLFDEVKLMDSSTASAFYNALTD 721
            LF E  + D  T    YN L +
Sbjct: 582 KLFYEESVPDDVT----YNTLIE 600



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 196/389 (50%), Gaps = 40/389 (10%)

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
           D A+ +F   +  G    VY ++ +I      G  ++ +     M++  + PN+VTYN +
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTL 248

Query: 270 IDA------------------------------------CGKGGVDFKHVVEIFDDMLRN 293
           IDA                                    CGKG      V E+ ++M   
Sbjct: 249 IDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKG--RMSEVGELVEEMRGK 306

Query: 294 GVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
           G+ PD +T+N+L+   C  G L +    L +EMV +G+  ++ TY TL++ +CK   +  
Sbjct: 307 GLVPDEVTYNTLVNGFCKEGNLHQGLV-LLSEMVGKGLSPNVVTYTTLINCMCKAGNLSR 365

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A EI  +M  + + PN  TY+T+IDG+ + G +++A  + SEM   G     V+YN ++ 
Sbjct: 366 AVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVH 425

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
            Y  LGR +EA+ + + M   G+  D V+Y+ ++ G+ ++ +  +  +M E+M    V P
Sbjct: 426 GYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLP 485

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           + +TYS+LI          EA  +FRE  + GL  D V Y++LI+A C +G +  A+ L 
Sbjct: 486 DTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLH 545

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           DEM + G  P+ VTY+ +I+   + A T+
Sbjct: 546 DEMVQRGFLPDNVTYSVLINGLNKKARTK 574



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 159/341 (46%), Gaps = 16/341 (4%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           ++ L++ + + G   + + + + M    L PN+VTY  +I+   K G +    VEIFD M
Sbjct: 315 YNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAG-NLSRAVEIFDQM 373

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
              G++P+  T+ +L+    + GL   A  + +EM+  G    + TYN L+   C   ++
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
             A  I+  M  + + P+VV+YST+I G+ +   L  A  M  EM   G+  D V+Y+++
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSL 493

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +       +  EA  + +EM   G+  D VTY +L+  Y   G+  +  R+ ++M     
Sbjct: 494 IQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGF 553

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID------------- 517
            P+ +TYS LI+  +K    K A ++  +        D V Y+ LI+             
Sbjct: 554 LPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGL 613

Query: 518 --ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
               C  GL+  A  +   M +   +PN   YN +I    R
Sbjct: 614 VKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSR 654



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/416 (23%), Positives = 178/416 (42%), Gaps = 90/416 (21%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-C 273
           +    + +G    V  ++ LI+   ++G    A+ +F+ M+   L+PN  TY  +ID  C
Sbjct: 334 LLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFC 393

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQ 332
            KG ++     ++  +M+ +G  P  +T+N+L+   C  G + EA   +   MV RG+  
Sbjct: 394 QKGLMN--EAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAV-GILRGMVERGLPP 450

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D+ +Y+T++   C+  ++  AF++  EM  K + P+ VTYS++I G     +L +A ++F
Sbjct: 451 DVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLF 510

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            EM   G+  D V+Y ++++ Y   G   +AL +  EM   G   D VTY+ L+ G  K+
Sbjct: 511 REMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKK 570

Query: 453 --------------------------------------------------GKYDEVRRMF 462
                                                             G  +E  R+F
Sbjct: 571 ARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVF 630

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           + M      PN   Y+ +I  +S+GG   +A  ++ E + +      V   AL+ AL + 
Sbjct: 631 KTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALARE 690

Query: 523 GL-----------------------------------VESAVSLLDEMTKEGIRPN 543
           G+                                   +++ +++L EM K+G+ P+
Sbjct: 691 GMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 174/407 (42%), Gaps = 55/407 (13%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  +   G  S+A++ F     R  R N+  +  + +I    + G ++ A  +   
Sbjct: 350 YTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNE--RTYTTLIDGFCQKGLMNEAYKVLSE 407

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +  G+  +V  ++AL+  Y   G  QEA+ +   M    L P++V+Y+ VI    +   
Sbjct: 408 MIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRER- 466

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +     ++ ++M+  GV PD +T++SL+  +C +  L EA  +LF EM+ RG+  D  TY
Sbjct: 467 ELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAF-DLFREMMRRGLPPDEVTY 525

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            +L++A C   ++  A  +  EM  +   P+ VTYS +I+G  K  R   A  +  ++ +
Sbjct: 526 TSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFY 585

Query: 398 LGIGLDRVSYNTVLSI---------------YAKLGRFEEALLVCKEMESSGIRKDAVTY 442
                D V+YNT++                 +   G   EA  V K M     + +A  Y
Sbjct: 586 EESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIY 645

Query: 443 NALLGGY-----------------------------------GKQGKYDEVRRMFEQMKA 467
           N ++ G+                                    ++G  DE+ R+ + +  
Sbjct: 646 NLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILR 705

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            C   +      L++V  K G     + +  E  + GL  D  ++S+
Sbjct: 706 SCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHSS 752



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 33/177 (18%)

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-FGRSATTECTVDDVER 569
           ++  ++ +L + G V  A++LL    + G  P V++YN+++DA   RS++     DD ER
Sbjct: 134 VFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193

Query: 570 DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI 629
                              +D+   G + N  +  +  ++     QG  E          
Sbjct: 194 VF-----------------RDMVRNGVSPN--VYTYNVIIRGVVSQGDLEKG-------- 226

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
           LG  +KM K  I PNVVT++ +++A  +    ++A  LL  +      V GVA  L+
Sbjct: 227 LGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAM-----AVGGVAANLI 278


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 146/472 (30%), Positives = 229/472 (48%), Gaps = 33/472 (6%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I +LGR G++D A  I +   ++G G  V  ++ LI A   +G   +A+ +F  MK  + 
Sbjct: 271 IRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSH 330

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           KP+ VTY  ++D     G D   V E + +M  +G  PD ITF  L+    + G  + A 
Sbjct: 331 KPDRVTYITMLDKFSDCG-DLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAF 389

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           +L + M  +G+  ++ TYNTL+  + +  ++D A ++   M    + P   TY   ID Y
Sbjct: 390 HLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFY 449

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K+GR D AL  F +MK  GI  + V+ N  L   A++GR  EA ++   ++S+G+  D+
Sbjct: 450 GKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDS 509

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           VTYN ++  Y K G+ DE   +   M  +   P+++  ++LI+   K G   EA ++F  
Sbjct: 510 VTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCR 569

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
            K   L   VV Y+ LI  L K G V+ A+ L   MT  G  PN +T+N+I+D       
Sbjct: 570 LKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCL----- 624

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
             C  D+V+  L    +   ++ M      DV     T N II     LV EK       
Sbjct: 625 --CKNDEVDLALKMLYKMTTMNCM-----PDVL----TFNTIIH---GLVIEK------- 663

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            R    I     +F +M K+ + P+ VT   +L    +    EDA  + E+ 
Sbjct: 664 -RVSDAIW----LFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDF 709



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 242/527 (45%), Gaps = 79/527 (14%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G+    Y+++ LI    +SG C+EA+ ++  M    LKP+L T++A++ A GK   D + 
Sbjct: 189 GFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRR-DTET 247

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           V  + ++M   G++P+  T+   + V  R G  + A  +   M   G   D+ TY  L+D
Sbjct: 248 VKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLID 307

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI---------------------DGYA- 380
           A+C   ++D A E+  +M A +  P+ VTY TM+                     DGYA 
Sbjct: 308 ALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAP 367

Query: 381 -------------KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
                        KAG +D+A ++   M+  G+  +  +YNT++S   ++ R ++AL + 
Sbjct: 368 DVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLF 427

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
             ME+ G+   A TY   +  YGK G+ D+    FE+MK   ++PN++  +  +   ++ 
Sbjct: 428 NNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEM 487

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G  +EA  IF   K  GL  D V Y+ ++    K G V+ A+ LL +M++    P+++  
Sbjct: 488 GRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVI 547

Query: 548 NSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
           NS+I+   ++              G+  E+  +   C   D  +     T N +I   G 
Sbjct: 548 NSLINTLYKA--------------GRVDEAWKM--FCRLKDMKLAPTVVTYNTLIAGLG- 590

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
               K GQ ++           + +F  M      PN +TF+ IL+   + +  + A  +
Sbjct: 591 ----KEGQVQRA----------MELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKM 636

Query: 668 LEELRLFDNQ-----VYGVAHGLLMGYR--DNIWVQALSLFDEVKLM 707
           L ++   +          + HGL++  R  D IW     LF ++K M
Sbjct: 637 LYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIW-----LFHQMKKM 678



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 189/361 (52%), Gaps = 2/361 (0%)

Query: 188  RKNDQGKLASAMISILGRLGKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQE 246
            R    G +   +I +L +  +  +A+++F     E G   T+ +++ LI  +      + 
Sbjct: 749  RVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEM 808

Query: 247  AISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL 306
            A ++F  MK     P++ TYN ++DA GK G     + E+++ M+ +  +P+ IT N ++
Sbjct: 809  AWNLFTEMKNAGCAPDVFTYNLLLDAHGKSG-KINELFELYEQMICSSCKPNTITHNIII 867

Query: 307  AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
            A   +    + A +LF ++V         TY  LLD + K  +++ A E+  EM      
Sbjct: 868  ANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCR 927

Query: 367  PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
            PN   Y+ +I+G+ K G ++ A  +F  M   GI  D  SY +++    + GR ++AL  
Sbjct: 928  PNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHY 987

Query: 427  CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
             ++++ +G+  D++ YN ++ G G+  + +E   ++++M++  ++P+L TY++LI     
Sbjct: 988  FEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGV 1047

Query: 487  GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
             G+ ++A +++ E +  GL+ +V  Y+ALI     +G  +SA ++   M   G  PN  T
Sbjct: 1048 AGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGT 1107

Query: 547  Y 547
            +
Sbjct: 1108 F 1108



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 158/306 (51%), Gaps = 1/306 (0%)

Query: 210  DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
            ++A N+F    N G    V+ ++ L+ A+G+SG   E   ++  M   + KPN +T+N +
Sbjct: 807  EMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNII 866

Query: 270  IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
            I    K        +++F D++     P   T+  LL    + G  E A+ LF EMV  G
Sbjct: 867  IANLVKSN-SLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYG 925

Query: 330  IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
               +   YN L++   K   ++ A E+   M  + I P++ +Y++++    +AGR+DDAL
Sbjct: 926  CRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDAL 985

Query: 390  NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            + F ++K  G+ LD ++YN ++    +  R EEAL +  EM+S GI  D  TYN+L+   
Sbjct: 986  HYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNL 1045

Query: 450  GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            G  G  ++  +++E+++   + PN+ TY+ LI  YS  G    A  +++     G   + 
Sbjct: 1046 GVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNT 1105

Query: 510  VLYSAL 515
              ++ L
Sbjct: 1106 GTFAQL 1111



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 156/308 (50%), Gaps = 3/308 (0%)

Query: 255  KRYNLKPNLVTYNAVIDACGKGGVDFKHVV-EIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            K   +KP L +YN +I+  G  GV    +   +F +M   G  PD  T+N LL    + G
Sbjct: 782  KELGVKPTLESYNFLIE--GFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSG 839

Query: 314  LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
                   L+ +M+      +  T+N ++  + K   +D A ++  ++ + + SP   TY 
Sbjct: 840  KINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYG 899

Query: 374  TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
             ++DG  K+GRL++A  +F EM   G   +   YN +++ + K G    A  + K M   
Sbjct: 900  PLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVRE 959

Query: 434  GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            GIR D  +Y +L+G   + G+ D+    FE++K   +  + + Y+ +ID   +    +EA
Sbjct: 960  GIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEA 1019

Query: 494  MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            + ++ E +  G+  D+  Y++LI  L   G+VE A  L +E+   G+ PNV TYN++I  
Sbjct: 1020 LTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRG 1079

Query: 554  FGRSATTE 561
            +  S  ++
Sbjct: 1080 YSMSGNSD 1087



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 147/624 (23%), Positives = 271/624 (43%), Gaps = 81/624 (12%)

Query: 156  ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
            A  Y   +   G  G   KA++ F     R    N      +A +  L  +G++  AK I
Sbjct: 439  AYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVA--CNASLYSLAEMGRLREAKVI 496

Query: 216  FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
            F    + G       ++ ++  Y ++G   EAI + + M     +P+++  N++I+   K
Sbjct: 497  FNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYK 556

Query: 276  GG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
             G VD     ++F  +    + P  +T+N+L+A   + G  + A  LF  M   G   + 
Sbjct: 557  AGRVD--EAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNT 614

Query: 335  FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
             T+NT+LD +CK  ++DLA +++ +M   N  P+V+T++T+I G     R+ DA+ +F +
Sbjct: 615  ITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQ 674

Query: 395  MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE-MESSGIRKDAVTYNALLGGYGKQG 453
            MK + +  D V+  T+L    K G  E+A  + ++ +   G+  D   +  L+GG   Q 
Sbjct: 675  MKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQA 733

Query: 454  KYDEVRRMFEQM----------------KADC--------------------VSPNLLTY 477
              ++     +++                K  C                    V P L +Y
Sbjct: 734  GTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESY 793

Query: 478  STLIDVYSKGGLYKEAM--QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
            + LI+ +   G++ + M   +F E K AG   DV  Y+ L+DA  K+G +     L ++M
Sbjct: 794  NFLIEGFL--GVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQM 851

Query: 536  TKEGIRPNVVTYNSII-------------DAF-----GRSATTECTVDDVERDLGKQKES 577
                 +PN +T+N II             D F     G  + T CT   +   L K   S
Sbjct: 852  ICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLK---S 908

Query: 578  ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
              L+      ++ V    R +N I  +   L+      G     C         +F++M 
Sbjct: 909  GRLEEAKELFEEMVDYGCRPNNAIYNI---LINGFGKTGDVNTACE--------LFKRMV 957

Query: 638  KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWV 695
            +  I+P++ ++++++         +DA    E+L+     +  +A+ L++    R +   
Sbjct: 958  REGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIE 1017

Query: 696  QALSLFDEVKLMDSSTASAFYNAL 719
            +AL+L+DE++    +     YN+L
Sbjct: 1018 EALTLYDEMQSRGINPDLFTYNSL 1041



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 105/454 (23%), Positives = 207/454 (45%), Gaps = 56/454 (12%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACG-KGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           + + VFN M+   +K +L TY  +      +GG+  +     F  M   G   +  ++N 
Sbjct: 142 DMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGL--RQTPFAFGKMREAGFHLNAYSYNG 199

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L+ +  + GL   A  ++  MV  G+   + T++ L+ A  K    +    ++ EM +  
Sbjct: 200 LIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLG 259

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           + PN+ TY+  I    +AGR+D+A  +   M+  G G D V+Y  ++      G+ ++A+
Sbjct: 260 LKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAM 319

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +  +M++S  + D VTY  +L  +   G    V+  + +M+AD  +P+++T++ L++  
Sbjct: 320 ELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNAL 379

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            K G   EA  +    ++ G+  ++  Y+ LI  L +   ++ A+ L + M   G+ P  
Sbjct: 380 CKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTA 439

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR-------- 596
            TY   ID +G+S  ++  ++  E+ +  +  + N+ A C+     + E GR        
Sbjct: 440 YTYILFIDFYGKSGRSDKALETFEK-MKIRGIAPNIVA-CNASLYSLAEMGRLREAKVIF 497

Query: 597 -------------TDNQIIKVFGQLVAEKAGQGKK---------ENRCRQEILCILGVFQ 634
                        T N ++K +      KAGQ  +         EN+C  +I+ I  +  
Sbjct: 498 NRLKSNGLAPDSVTYNMMMKCY-----SKAGQVDEAIELLSDMSENQCEPDIIVINSLIN 552

Query: 635 KMHK----------------LKIKPNVVTFSAIL 652
            ++K                +K+ P VVT++ ++
Sbjct: 553 TLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLI 586



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 130/589 (22%), Positives = 237/589 (40%), Gaps = 109/589 (18%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
            Y  +++     G+  +AI+    +   E +      + +++I+ L + G+VD A  +F  
Sbjct: 512  YNMMMKCYSKAGQVDEAIE--LLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCR 569

Query: 219  ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
              +     TV  ++ LI+  G+ G  Q A+ +F SM      PN +T+N ++D  C    
Sbjct: 570  LKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDE 629

Query: 278  VDFKHVVEIFDDMLRNGVQPDRITFNSLL----------------------------AVC 309
            VD    +++   M      PD +TFN+++                             +C
Sbjct: 630  VDL--ALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLC 687

Query: 310  S------RGGLWEAARNLFNEMVHR---------------GIDQDIFTYNTLL------- 341
            +      + GL E A  +  + VHR               GI     T  T+L       
Sbjct: 688  TLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVC 747

Query: 342  --------------DAICKGAQMDLAFEIMAEMPAK-NISPNVVTYSTMIDGYAKAGRLD 386
                            +CK  Q  +A  +      +  + P + +Y+ +I+G+      +
Sbjct: 748  GRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDE 807

Query: 387  DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
             A N+F+EMK  G   D  +YN +L  + K G+  E   + ++M  S  + + +T+N ++
Sbjct: 808  MAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIII 867

Query: 447  GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
                K    D+   +F  + +   SP   TY  L+D   K G  +EA ++F E    G +
Sbjct: 868  ANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCR 927

Query: 507  ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
             +  +Y+ LI+   K G V +A  L   M +EGIRP++ +Y S++     +      VDD
Sbjct: 928  PNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGR----VDD 983

Query: 567  VERDLGKQKESA-NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
                  K K++   LD++               N +I   G           + +R  + 
Sbjct: 984  ALHYFEKLKQTGLYLDSIAY-------------NLMIDGLG-----------RSHRIEEA 1019

Query: 626  ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
                L ++ +M    I P++ T+++++         E A  L EEL+  
Sbjct: 1020 ----LTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFI 1064


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/550 (25%), Positives = 261/550 (47%), Gaps = 35/550 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S   S + R  + +L  +  +     G  + +Y  + +I+ + R      A SV   + +
Sbjct: 92  SRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMK 151

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +P+  T+N +I      G      V + D M+ NG QPD +T+NS++    R G   
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEG-KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +L  +M  R +  D+FTY+T++D++C+   +D A  +  EM  K I  +VVTY++++
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G  KAG+ +D   +  +M    I  + +++N +L ++ K G+ +EA  + KEM + GI 
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + +TYN L+ GY  Q +  E   M + M  +  SP+++T+++LI  Y       + M++
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           FR   + GL A+ V YS L+   C++G ++ A  L  EM   G+ P+V+TY  ++D    
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
           +   E  ++  E DL K K                 + G      I ++  ++      G
Sbjct: 451 NGKLEKALEIFE-DLQKSK----------------MDLG------IVMYTTIIEGMCKGG 487

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
           K E+           +F  +    +KPNV+T++ +++   +  S  +A++LL ++    N
Sbjct: 488 KVEDA--------WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539

Query: 677 QVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
                 +  L+    RD     +  L +E+K    S  ++    + DML    ++   + 
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRY 599

Query: 735 VVLEG-KRRQ 743
            + +G K RQ
Sbjct: 600 CLSKGSKSRQ 609



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 220/476 (46%), Gaps = 35/476 (7%)

Query: 139 DVSLG-DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL 195
           D SL  D+L+K E +   AD +T+  ++  L   G    AI  F    K  E K  +  +
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF----KEMETKGIKSSV 263

Query: 196 AS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
            +  +++  L + GK +    + +  ++      V  F+ L+  + + G  QEA  ++  
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M    + PN++TYN ++D  C +  +   +   + D M+RN   PD +TF SL+      
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEAN--NMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              +    +F  +  RG+  +  TY+ L+   C+  ++ LA E+  EM +  + P+V+TY
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
             ++DG    G+L+ AL +F +++   + L  V Y T++    K G+ E+A  +   +  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G++ + +TY  ++ G  K+G   E   +  +M+ D  +PN  TY+TLI  + + G    
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561

Query: 493 AMQIFREFKQAGLKADVVLYSALIDAL-----------CKNGLVESAVSLLDEMTKEGIR 541
           + ++  E K  G  AD      +ID L           C +   +S   LL+    E IR
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIR 621

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVE----------RDLGKQKESANLDAMCSQD 587
            + +T+  +      + TT   V+ +E          RDL K + S+ L    ++D
Sbjct: 622 LSSLTFVKMFPC--NTITTSLNVNTIEARGMNSAELNRDLRKLRRSSVLKKFKNRD 675



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/469 (21%), Positives = 210/469 (44%), Gaps = 51/469 (10%)

Query: 276 GGVDFKH--VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G VD K    + +F +M+R+   P  + F+   +  +R   +    +   ++   GI  +
Sbjct: 63  GIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHN 122

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           I+T N +++  C+  +   A+ ++ ++      P+  T++T+I G    G++ +A+ +  
Sbjct: 123 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVD 182

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M   G   D V+YN++++   + G    AL + ++ME   ++ D  TY+ ++    + G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
             D    +F++M+   +  +++TY++L+    K G + +   + ++     +  +V+ ++
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            L+D   K G ++ A  L  EM   GI PN++TYN+++D +                  +
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ--------------NR 348

Query: 574 QKESAN-LDAM----CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
             E+ N LD M    CS D         T   +IK  G  + ++   G K          
Sbjct: 349 LSEANNMLDLMVRNKCSPDIV-------TFTSLIK--GYCMVKRVDDGMK---------- 389

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVYGVAHG 684
              VF+ + K  +  N VT+S ++    +    + A  L +E+     L D   YG+   
Sbjct: 390 ---VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI--- 443

Query: 685 LLMGYRDNIWVQ-ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
           LL G  DN  ++ AL +F++++          Y  + + +   G+   A
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 235/488 (48%), Gaps = 25/488 (5%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+ L RL  VD A +++      G    V  F+ LI+     G  + A+ ++N M R  
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            +P++++YN +I+  C  G  +    V +F  M +NG +P+ +T+N+++    +  L   
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNM--AVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVND 251

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A +  +EMV RGI  D  TYN+++  +C   Q++ A  +   M      P+VVTY+ +ID
Sbjct: 252 AMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIID 311

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
              K   ++DA +  SEM   GI  D V+Y T+L     LG+  EA+ + K+ME  G + 
Sbjct: 312 SLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKP 371

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D V YN ++    K    ++      +M    + PN +TYST++  +   G   EA Q+F
Sbjct: 372 DVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLF 431

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           +E     +  + + +S L+D LC+ G+V  A  + + MT++G+ PN+ TYN++++ +   
Sbjct: 432 KEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLR 491

Query: 558 ATTECTVDDVERDLGK------QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
                     E  +GK         +  ++  C+    D  +A         +  Q+  +
Sbjct: 492 CKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKA---------LLTQMSVK 542

Query: 612 KAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           K            + LC +G       +F+KM    + P ++T+S +LN   +    ++A
Sbjct: 543 KLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEA 602

Query: 665 SMLLEELR 672
             L + ++
Sbjct: 603 LKLFKSMK 610



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 218/436 (50%), Gaps = 39/436 (8%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
           ++  F   + +  +       + + N M  + +   + + N +I+  C    VDF   V 
Sbjct: 92  SIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDF--AVS 149

Query: 286 IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           ++  M + G+QPD ITF +L+  VC+ G + + A  L+NEMV  G + D+ +YNTL++ +
Sbjct: 150 VWGKMFKLGIQPDVITFTTLINGVCNEGKI-KVAVELYNEMVRSGHEPDVISYNTLINGL 208

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C     ++A  +  +M      PNVVTY+T+ID   K   ++DA++  SEM   GI  D 
Sbjct: 209 CNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDA 268

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           ++YN+++     LG+  EA  + K ME +G + D VTYN ++    K    ++      +
Sbjct: 269 ITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSE 328

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    + P+++TY+T++      G   EA+++F++ +Q G K DVV Y+ +ID+LCK+ L
Sbjct: 329 MVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRL 388

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           V  A+  L EM   GI PN VTY++I+  F               +LG+  E+  L    
Sbjct: 389 VNDAMEFLSEMVDRGIPPNAVTYSTILHGFC--------------NLGQLDEATQLFK-- 432

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK-KENRCRQEILCILGVFQKMHKLKIKP 643
                  +  GR        F  LV     +G   E R          VF+ M +  ++P
Sbjct: 433 -------EMVGRNVMPNTLTFSILVDGLCQEGMVSEAR---------WVFETMTEKGVEP 476

Query: 644 NVVTFSAILNA-CSRC 658
           N+ T++A++N  C RC
Sbjct: 477 NIYTYNALMNGYCLRC 492



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 222/483 (45%), Gaps = 60/483 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           Y  L+  L N G  + A+  F    K+ E+   +  + +   +I  L +   V+ A +  
Sbjct: 201 YNTLINGLCNSGNTNMAVHVF----KKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFL 256

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
              +  G       +++++      G   EA  +F  M++   KP++VTYN +ID+  K 
Sbjct: 257 SEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKD 316

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            +      +   +M+  G+ PD +T+ ++L  +C  G L EA R LF +M  +G   D+ 
Sbjct: 317 RL-VNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIR-LFKKMEQKGCKPDVV 374

Query: 336 TYNTLLDAICKG-----------------------------------AQMDLAFEIMAEM 360
            YNT++D++CK                                     Q+D A ++  EM
Sbjct: 375 AYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM 434

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
             +N+ PN +T+S ++DG  + G + +A  +F  M   G+  +  +YN +++ Y    + 
Sbjct: 435 VGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKM 494

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
            EA  V + M   G   D  +YN L+ GY    + D+ + +  QM    ++PN +TY+T+
Sbjct: 495 NEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTI 554

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           +      G   +A ++F++   +G+   ++ YS L++ LCK+G ++ A+ L   M ++ +
Sbjct: 555 MKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKL 614

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
            P+++ Y  +I+                   GK + +  L +  S D   +Q  GRT N 
Sbjct: 615 EPDIILYTILIEGMFIG--------------GKLEVAKGLFSKLSAD--GIQPPGRTYNV 658

Query: 601 IIK 603
           +IK
Sbjct: 659 MIK 661



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 208/426 (48%), Gaps = 32/426 (7%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +A++ F  M R N +P++V +   + +  K    +  VV + + M   GV     + N L
Sbjct: 76  DALASFYRMARMNPRPSIVEFGKFLGSIAKMK-QYSTVVYLCNQMDLFGVTHTVYSLNIL 134

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    R    + A +++ +M   GI  D+ T+ TL++ +C   ++ +A E+  EM     
Sbjct: 135 INCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGH 194

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            P+V++Y+T+I+G   +G  + A+++F +M+  G   + V+YNT++    K     +A+ 
Sbjct: 195 EPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMD 254

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
              EM   GI  DA+TYN+++ G    G+ +E  R+F++M+ +   P+++TY+ +ID   
Sbjct: 255 FLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLY 314

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K  L  +A     E    G+  DVV Y+ ++  LC  G +  A+ L  +M ++G +P+VV
Sbjct: 315 KDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVV 374

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
            YN+IID+  +       V+D             ++ +    D+ +     T + I+  F
Sbjct: 375 AYNTIIDSLCKDRL----VNDA------------MEFLSEMVDRGIPPNAVTYSTILHGF 418

Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
             L     GQ  +  +          +F++M    + PN +TFS +++   +     +A 
Sbjct: 419 CNL-----GQLDEATQ----------LFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEAR 463

Query: 666 MLLEEL 671
            + E +
Sbjct: 464 WVFETM 469



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 174/331 (52%), Gaps = 3/331 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L  LG+++ A  +F+    +G    V A++ +I +  +     +A+   + M    + PN
Sbjct: 348 LCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPN 407

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
            VTY+ ++   C  G +D     ++F +M+   V P+ +TF+ L+    + G+   AR +
Sbjct: 408 AVTYSTILHGFCNLGQLD--EATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWV 465

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F  M  +G++ +I+TYN L++  C   +M+ A ++   M  K  +P++ +Y+ +I+GY  
Sbjct: 466 FETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCN 525

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           + R+D A  + ++M    +  + V+YNT++     +GR  +A  + K+M SSG+    +T
Sbjct: 526 SRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMT 585

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y+ LL G  K G  DE  ++F+ MK   + P+++ Y+ LI+    GG  + A  +F +  
Sbjct: 586 YSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLS 645

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLL 532
             G++     Y+ +I  L K GL + A  L 
Sbjct: 646 ADGIQPPGRTYNVMIKGLLKEGLSDEAYELF 676



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 184/357 (51%), Gaps = 13/357 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           YT +L  L   G+ ++AI+ F    K+ E+K  +  + +   +I  L +   V+ A    
Sbjct: 341 YTTILHGLCYLGQLNEAIRLF----KKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFL 396

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
              ++ G       +S ++  +   G   EA  +F  M   N+ PN +T++ ++D  C +
Sbjct: 397 SEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQE 456

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           G V       +F+ M   GV+P+  T+N+L+   C R  + EA R +F  MV +G   D+
Sbjct: 457 GMVS--EARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEA-RKVFEIMVGKGCAPDL 513

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            +YN L++  C   +MD A  ++ +M  K ++PN VTY+T++ G    GRL DA  +F +
Sbjct: 514 HSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKK 573

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G+    ++Y+ +L+   K G  +EAL + K M+   +  D + Y  L+ G    GK
Sbjct: 574 MCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGK 633

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            +  + +F ++ AD + P   TY+ +I    K GL  EA ++FR++K   +K +V++
Sbjct: 634 LEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKM--MKHNVII 688



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 153/346 (44%), Gaps = 43/346 (12%)

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +DDAL  F  M  +      V +   L   AK+ ++   + +C +M+  G+     + N 
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+    +    D    ++ +M    + P+++T++TLI+     G  K A++++ E  ++G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
            + DV+ Y+ LI+ LC +G    AV +  +M + G +PNVVTYN+IID+  +       +
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
           D +   +G                + +     T N I+     L     GQ  +  R   
Sbjct: 254 DFLSEMVG----------------RGIPPDAITYNSIVHGLCCL-----GQLNEATR--- 289

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV------ 678
                  +F++M +   KP+VVT++ I+++  +     DA+  L E  + D  +      
Sbjct: 290 -------LFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSE--MVDQGIPPDVVT 340

Query: 679 -YGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
              + HGL    + N   +A+ LF +++          YN + D L
Sbjct: 341 YTTILHGLCYLGQLN---EAIRLFKKMEQKGCKPDVVAYNTIIDSL 383


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 240/488 (49%), Gaps = 39/488 (7%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G   LA+  +   L+       Y  + ++ +Y +S    +A +V + M++  + P++V
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           T+N +IDA  + G D    + + D M   G++P  +TFNS+L    +   ++ A+ +F  
Sbjct: 194 THNVLIDARFRAG-DVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRA 252

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M    +  D+ ++N L+   C+  +++ A +   EM  + ++P+VV++S +I  ++  G+
Sbjct: 253 MDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGK 312

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +D A     EMK LG+  D V Y  V+  + + G   EAL V  EM   G   D VTYN 
Sbjct: 313 MDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNT 372

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           LL G  KQ +  +   +  +MK   V+P+L T++TLI  Y + G +++A+Q+F       
Sbjct: 373 LLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQR 432

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           L+ DVV Y++LID +C+ G +  A  L D+M    I PN VTY+ +ID       + C  
Sbjct: 433 LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILID-------SHCEK 485

Query: 565 DDVERDLGKQKESANLDAMCSQDD-KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
             VE   G       LD M S+ +  ++     T N IIK + +    K GQ   +   +
Sbjct: 486 GQVEEAFG------FLDEMVSKGNLPNIM----TYNSIIKGYCRSGNVKKGQQFLQKMMQ 535

Query: 624 QEILCIL--------------------GVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
             IL  L                     VF  M K  ++P+ VT++ I+N  S   + E+
Sbjct: 536 DNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEE 595

Query: 664 ASMLLEEL 671
           A  + +++
Sbjct: 596 AGRVFKKM 603



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 197/406 (48%), Gaps = 17/406 (4%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA------SAMISILGRLGK 208
           G   +  +L+ L     + KA + F        R  DQ  +A      + +I    R+G+
Sbjct: 226 GIVTFNSVLKGLCKHRRFDKAKEVF--------RAMDQCSVAPDVRSFNILIGGFCRVGE 277

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           V+ A   ++     G    V +FS LI  +   G    A +    MK   L P+ V Y  
Sbjct: 278 VEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTM 337

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVH 327
           VI    + G      + + D+M+  G  PD +T+N+LL  +C +  L +A   L NEM  
Sbjct: 338 VIGGFCRAG-SMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDA-EELLNEMKE 395

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           RG+  D+ T+ TL+   C+    + A ++   +  + + P+VV Y+++IDG  + G L  
Sbjct: 396 RGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAK 455

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  ++ +M    I  + V+Y+ ++  + + G+ EEA     EM S G   + +TYN+++ 
Sbjct: 456 ANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIK 515

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           GY + G   + ++  ++M  D + P+L+T++TLI  Y K      A  +F   ++  ++ 
Sbjct: 516 GYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQP 575

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           D V Y+ +I+   + G +E A  +  +M   GI P+  TY S+I+ 
Sbjct: 576 DAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLING 621



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 180/351 (51%), Gaps = 9/351 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I +    GK+D A          G       ++ +I  + R+G   EA+ V + M  
Sbjct: 301 SCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVG 360

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVV----EIFDDMLRNGVQPDRITFNSLLAVCSRG 312
               P++VTYN +++   K     +H +    E+ ++M   GV PD  TF +L+    R 
Sbjct: 361 LGCLPDVVTYNTLLNGLCK-----QHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRD 415

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G +E A  LF+ ++H+ +  D+  YN+L+D +C+   +  A E+  +M A+ I PN VTY
Sbjct: 416 GNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTY 475

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           S +ID + + G++++A     EM   G   + ++YN+++  Y + G  ++     ++M  
Sbjct: 476 SILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQ 535

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             I  D +T+N L+ GY K+        +F  M+ + V P+ +TY+ +I+ +S+ G  +E
Sbjct: 536 DNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEE 595

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           A ++F++   +G++ D   Y +LI+     G  + A  L DEM   G  P+
Sbjct: 596 AGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 154/328 (46%), Gaps = 27/328 (8%)

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           N  T + M+  Y K+   D A  + SEM+   +  D V++N ++    + G  + A+ + 
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
             M + G++   VT+N++L G  K  ++D+ + +F  M    V+P++ +++ LI  + + 
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRV 275

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G  +EAM+ ++E +Q G+  DVV +S LI      G ++ A + L EM   G+ P+ V Y
Sbjct: 276 GEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIY 335

Query: 548 NSIIDAFGR--SATTECTVDDVERDLGKQKESAN----LDAMCSQDD--------KDVQE 593
             +I  F R  S +    V D    LG   +       L+ +C Q           +++E
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKE 395

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
            G T +  +  F  L+      G  E          L +F  +   +++P+VV ++++++
Sbjct: 396 RGVTPD--LCTFTTLIHGYCRDGNFEK--------ALQLFDTLLHQRLRPDVVAYNSLID 445

Query: 654 ACSRCNSFEDASMLLEEL---RLFDNQV 678
              R      A+ L +++    +F N V
Sbjct: 446 GMCRKGDLAKANELWDDMHAREIFPNHV 473



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 35/285 (12%)

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           N  T + ++  Y K   + +A  +  E ++  +  DVV ++ LIDA  + G V++A++L+
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQ 592
           D M  +G++P +VT+NS++    +            R   K KE       CS     V 
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCK-----------HRRFDKAKEVFRAMDQCS-----VA 259

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKIKPNVVTFSAI 651
              R+ N +I  F                CR  E+   +  +++M +  + P+VV+FS +
Sbjct: 260 PDVRSFNILIGGF----------------CRVGEVEEAMKFYKEMQQRGVTPDVVSFSCL 303

Query: 652 LNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDS 709
           +   S     + A+  L E++       GV + +++G   R     +AL + DE+  +  
Sbjct: 304 IGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGC 363

Query: 710 STASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
                 YN L + L    +   A+ ++ E K R V  ++ + + L
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTL 408


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/515 (28%), Positives = 251/515 (48%), Gaps = 8/515 (1%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           L   L + G   +AIQCF+  +KR  R   + +  + ++    +LGK D  K  F+  + 
Sbjct: 66  LFSVLIDLGMLEEAIQCFS-KMKRF-RVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIG 123

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
            G   TV+ ++ +I    + G  + A  +F  MK   L P+ VTYN++ID  GK G    
Sbjct: 124 AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG-RLD 182

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             V  F++M     +PD IT+N+L+    + G        + EM   G+  ++ +Y+TL+
Sbjct: 183 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 242

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           DA CK   M  A +   +M    + PN  TY+++ID   K G L DA  + +EM  +G+ 
Sbjct: 243 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 302

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + V+Y  ++       R +EA  +  +M+++G+  +  +YNAL+ G+ K    D    +
Sbjct: 303 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 362

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
             ++K   + P+LL Y T I         + A  +  E K+ G+KA+ ++Y+ L+DA  K
Sbjct: 363 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 422

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER---DLGKQKESA 578
           +G     + LLDEM +  I   VVT+  +ID   ++      VD   R   D G Q  +A
Sbjct: 423 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 482

Query: 579 NLDAMCSQDDKDVQ-EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKM 636
              AM     KD Q EA  T  + +   G +    A     +   +Q  +L  L +  KM
Sbjct: 483 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 542

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            ++ +K +++ +++++   S CN  + A   LEE+
Sbjct: 543 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 577



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 194/427 (45%), Gaps = 74/427 (17%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI   G++G++D     FE   +      V  ++ALI+ + + G     +  +  MK 
Sbjct: 169 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 228

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             LKPN+V+Y+ ++DA  K G+  +  ++ + DM R G+ P+  T+ SL+ A C  G L 
Sbjct: 229 NGLKPNVVSYSTLVDAFCKEGM-MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 287

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +A R L NEM+  G++ ++ TY  L+D +C   +M  A E+  +M    + PN+ +Y+ +
Sbjct: 288 DAFR-LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 346

Query: 376 IDGYAKAGRLDDALNMFSE-----------------------------------MKFLGI 400
           I G+ KA  +D AL + +E                                   MK  GI
Sbjct: 347 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 406

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMES---------------------------- 432
             + + Y T++  Y K G   E L +  EM+                             
Sbjct: 407 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 466

Query: 433 --------SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
                    G++ +A  + A++ G  K  + +    +FEQM    + P+   Y++L+D  
Sbjct: 467 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 526

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            K G   EA+ +  +  + G+K D++ Y++L+  L     ++ A S L+EM  EGI P+ 
Sbjct: 527 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 586

Query: 545 VTYNSII 551
           V   S++
Sbjct: 587 VLCISVL 593



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/411 (23%), Positives = 172/411 (41%), Gaps = 70/411 (17%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+   + GK+ +    +      G    V ++S L+ A+ + G  Q+AI  +  M+R
Sbjct: 204 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 263

Query: 257 YNLKPNLVTYNAVIDA-CGKG---------------GVDF------------------KH 282
             L PN  TY ++IDA C  G               GV++                  K 
Sbjct: 264 VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE 323

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             E+F  M   GV P+  ++N+L+    +    + A  L NE+  RGI  D+  Y T + 
Sbjct: 324 AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 383

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            +C   +++ A  +M EM    I  N + Y+T++D Y K+G   + L++  EMK L I +
Sbjct: 384 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 443

Query: 403 DRVSYNTVL-----------------------------SIYAKL-------GRFEEALLV 426
             V++  ++                             +I+  +        + E A  +
Sbjct: 444 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 503

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            ++M   G+  D   Y +L+ G  KQG   E   + ++M    +  +LL Y++L+   S 
Sbjct: 504 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 563

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
               ++A     E    G+  D VL  +++    + G ++ AV L   + K
Sbjct: 564 CNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 614


>gi|224089803|ref|XP_002308816.1| predicted protein [Populus trichocarpa]
 gi|222854792|gb|EEE92339.1| predicted protein [Populus trichocarpa]
          Length = 700

 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 171/608 (28%), Positives = 301/608 (49%), Gaps = 60/608 (9%)

Query: 250 VFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV-VEIFDDMLRNGVQPDRITFNSLLAV 308
           VFN + +++ K  L+  +AV+        D   + ++ F + L+     + + +N  L V
Sbjct: 130 VFNVLSKFDGK--LLEQDAVVILNNMSNPDTALLALKFFQERLK--FNREVVVYNVTLKV 185

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA--ICKGAQMDLAFEIMAEMPAKNIS 366
             +G   + A  LF+EM+ RG+  D FT++T++    +C  A  D A E   +MP+  + 
Sbjct: 186 FRKGRDLDKAEKLFDEMLERGVKPDNFTFSTIISCARLCNLA--DKAVEWFEKMPSFGLE 243

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P+ VT STMID Y +AG ++ AL+++   +     LD  +++T++ IY   G F+  L V
Sbjct: 244 PDDVTLSTMIDSYGRAGNVEKALSLYDRARTGEWRLDATAFSTLIRIYKVAGNFDGCLNV 303

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            +EM++ G++ + V YN LL   G+  +  +V++ ++ +  + +SP+ +TY+ L+  Y +
Sbjct: 304 YEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDIIDNGLSPSFVTYAALLHAYGR 363

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN-GLVESAVSLLDEMTKEGIRPNVV 545
               ++A +I+RE K+ GL  +VVLY++++ A+C + G V+ AV + ++M   GI+P+  
Sbjct: 364 ARYGEDAFKIYREMKEKGLGLNVVLYNSIL-AMCADLGHVDKAVEIFEDMKSSGIKPDSW 422

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-LDAMCSQDDKDVQEAGRTDNQIIKV 604
           T++S+I  F       C         GK  E+ N L+ M         EAG   N  I  
Sbjct: 423 TFSSMITIFS------CC--------GKVSEAENTLNEMF--------EAGFQPNIFI-- 458

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
              L +     GK      Q I  ++  F ++ +L I P+      +LN  ++  + E +
Sbjct: 459 ---LTSLIQCYGKA-----QRIDDVVNTFNRIFELVITPDDRFCGCLLNVMTQTPNEELS 510

Query: 665 SMLLEELRLFDNQVYGVAHGLLMGYRD---NIWVQALSLFDEVKLMDSSTASAFYNALTD 721
            ++    R   N   G    LL+  +D   N   +A  LFD +    +    A+ N L D
Sbjct: 511 KLVKCAERA--NPKLGYVVKLLVEEQDSEGNFKNEATDLFDSIS---TEVKKAYCNCLID 565

Query: 722 MLWHFGQ-KRGAQLVVLEGKRRQVWENVWSESC----LDLHLMSSGAARAMVHAWLLNIH 776
           +       +R  +L+ L G   +++ N+ S +     L+L  +S GAA   +H W+ ++ 
Sbjct: 566 LCIKLNMLERACELLDL-GLTLEIYTNIMSRTSTQWSLNLKSLSPGAAMTALHIWMNDLS 624

Query: 777 SIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTG 836
            ++  G +LP LL I TG GKH     +  L    E  L  + +PF  A   +G F++T 
Sbjct: 625 KVLEAGEQLPPLLGINTGHGKHK--YSEKGLANVFESYLKELNSPFHEAPDKVGWFLTTK 682

Query: 837 PMVASWLR 844
               SWL 
Sbjct: 683 VAAESWLE 690



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 166/339 (48%), Gaps = 15/339 (4%)

Query: 245 QEAISVFNSM--------------KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           Q+A+ + N+M              +R      +V YN  +    KG  D     ++FD+M
Sbjct: 144 QDAVVILNNMSNPDTALLALKFFQERLKFNREVVVYNVTLKVFRKGR-DLDKAEKLFDEM 202

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           L  GV+PD  TF+++++      L + A   F +M   G++ D  T +T++D+  +   +
Sbjct: 203 LERGVKPDNFTFSTIISCARLCNLADKAVEWFEKMPSFGLEPDDVTLSTMIDSYGRAGNV 262

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           + A  +           +   +ST+I  Y  AG  D  LN++ EMK LG+  + V YN +
Sbjct: 263 EKALSLYDRARTGEWRLDATAFSTLIRIYKVAGNFDGCLNVYEEMKALGVKPNLVIYNIL 322

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           L    +  R  +     +++  +G+    VTY ALL  YG+    ++  +++ +MK   +
Sbjct: 323 LDAMGRAKRPWQVKKFYQDIIDNGLSPSFVTYAALLHAYGRARYGEDAFKIYREMKEKGL 382

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
             N++ Y++++ + +  G   +A++IF + K +G+K D   +S++I      G V  A +
Sbjct: 383 GLNVVLYNSILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVSEAEN 442

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
            L+EM + G +PN+    S+I  +G++   +  V+   R
Sbjct: 443 TLNEMFEAGFQPNIFILTSLIQCYGKAQRIDDVVNTFNR 481



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 188/385 (48%), Gaps = 8/385 (2%)

Query: 137 RDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA 196
           +DDV   ++L KF+ KL    D   +L  + N      A++ F   +K     N +  + 
Sbjct: 127 KDDV--FNVLSKFDGKLL-EQDAVVILNNMSNPDTALLALKFFQERLKF----NREVVVY 179

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +  + +  +   +D A+ +F+  L  G     + FS +IS         +A+  F  M  
Sbjct: 180 NVTLKVFRKGRDLDKAEKLFDEMLERGVKPDNFTFSTIISCARLCNLADKAVEWFEKMPS 239

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           + L+P+ VT + +ID+ G+ G + +  + ++D       + D   F++L+ +    G ++
Sbjct: 240 FGLEPDDVTLSTMIDSYGRAG-NVEKALSLYDRARTGEWRLDATAFSTLIRIYKVAGNFD 298

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
              N++ EM   G+  ++  YN LLDA+ +  +     +   ++    +SP+ VTY+ ++
Sbjct: 299 GCLNVYEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDIIDNGLSPSFVTYAALL 358

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             Y +A   +DA  ++ EMK  G+GL+ V YN++L++ A LG  ++A+ + ++M+SSGI+
Sbjct: 359 HAYGRARYGEDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDMKSSGIK 418

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D+ T+++++  +   GK  E      +M      PN+   ++LI  Y K     + +  
Sbjct: 419 PDSWTFSSMITIFSCCGKVSEAENTLNEMFEAGFQPNIFILTSLIQCYGKAQRIDDVVNT 478

Query: 497 FREFKQAGLKADVVLYSALIDALCK 521
           F    +  +  D      L++ + +
Sbjct: 479 FNRIFELVITPDDRFCGCLLNVMTQ 503



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 162/358 (45%), Gaps = 6/358 (1%)

Query: 189 KNDQGKLASAMISILGRLGKVD---LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           K D   L    + IL  +   D   LA   F+  L   +   V  ++  +  + +     
Sbjct: 136 KFDGKLLEQDAVVILNNMSNPDTALLALKFFQERLK--FNREVVVYNVTLKVFRKGRDLD 193

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +A  +F+ M    +KP+  T++ +I +C +        VE F+ M   G++PD +T +++
Sbjct: 194 KAEKLFDEMLERGVKPDNFTFSTII-SCARLCNLADKAVEWFEKMPSFGLEPDDVTLSTM 252

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    R G  E A +L++         D   ++TL+         D    +  EM A  +
Sbjct: 253 IDSYGRAGNVEKALSLYDRARTGEWRLDATAFSTLIRIYKVAGNFDGCLNVYEEMKALGV 312

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            PN+V Y+ ++D   +A R       + ++   G+    V+Y  +L  Y +    E+A  
Sbjct: 313 KPNLVIYNILLDAMGRAKRPWQVKKFYQDIIDNGLSPSFVTYAALLHAYGRARYGEDAFK 372

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + +EM+  G+  + V YN++L      G  D+   +FE MK+  + P+  T+S++I ++S
Sbjct: 373 IYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFS 432

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             G   EA     E  +AG + ++ + ++LI    K   ++  V+  + + +  I P+
Sbjct: 433 CCGKVSEAENTLNEMFEAGFQPNIFILTSLIQCYGKAQRIDDVVNTFNRIFELVITPD 490


>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
 gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
 gi|223948163|gb|ACN28165.1| unknown [Zea mays]
 gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
          Length = 786

 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 139/523 (26%), Positives = 253/523 (48%), Gaps = 13/523 (2%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF- 216
           D T LL+ L   G W  A+    +A K  E   D   L   ++  LGR G+ D    +  
Sbjct: 106 DITSLLKALELSGHWEWALALLRWAGK--EGAADASAL-EMVVRALGREGQHDAVCALLD 162

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           ET L  G    V A++ ++ A  R+G  + A+ +F  ++R  + P LVTYN V+D  G+ 
Sbjct: 163 ETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRM 222

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G  +  +V + D+M   GV+PD  T ++++A C R GL + A   F ++  RG    + T
Sbjct: 223 GRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVT 282

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN LL    K      A  ++ EM      P+ VTY+ +   YA+AG  ++A      M 
Sbjct: 283 YNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMA 342

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  +  +YNTV++ Y  +G+ +EAL +  +M+ +G   +  TYN +LG  GK+ ++ 
Sbjct: 343 SKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFT 402

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
            +  M  +M     +PN +T++T++ V  K G+     ++    +  G++     Y+ LI
Sbjct: 403 VMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLI 462

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS---ATTECTVDDVE-RDLG 572
            A  + G   +A  + +EMT  G  P + TYN++++   R    +T +  V  +  +   
Sbjct: 463 AAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFK 522

Query: 573 KQKESANLDAMCSQDDKDVQEAGRTDNQII---KVFGQLVAEKAGQGKKENRCRQEILCI 629
             ++S +L   C     +V      +N++     VF   V  +        +CR+ +  +
Sbjct: 523 PNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRT-LVIANFKCRR-LDGM 580

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              FQ++      P++V F+++L+  ++   +  A+ + + ++
Sbjct: 581 ETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIK 623



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 233/534 (43%), Gaps = 70/534 (13%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G  AS +I+   R G VD A   FE     G+   V  ++AL+  +G++G   EA+ V  
Sbjct: 245 GFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLG 304

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            M++   +P+ VTYN +     + G  F+      D M   G+ P+  T+N+++      
Sbjct: 305 EMEQNGCQPDAVTYNELAGTYARAGF-FEEAARCLDTMASKGLLPNAFTYNTVMTAYGNV 363

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  + A  LF++M   G   ++ TYN +L  + K ++  +  E++ EM     +PN VT+
Sbjct: 364 GKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTW 423

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +TM+    K G  D    +   M+  G+ L R +YNT+++ Y + G    A  +  EM S
Sbjct: 424 NTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTS 483

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           +G      TYNALL    +QG +   + +  +M+     PN  +YS L+  Y+KGG    
Sbjct: 484 AGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAG 543

Query: 493 AMQI------------------------------------FREFKQAGLKADVVLYSALI 516
              I                                    F+E K  G   D+V++++++
Sbjct: 544 IAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSML 603

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
               KNG+   A  + D + + G+ P+++TYNS++D + + + +     + E+ L + K 
Sbjct: 604 SIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESW----EAEKILNQLK- 658

Query: 577 SANLDAMCSQDDK-DVQEA-----GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
                  CSQ  K DV        G     ++K   ++++E    G     C      ++
Sbjct: 659 -------CSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAP--CAVTYHTLV 709

Query: 631 GVFQKMHKLK-------------IKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           G +  +                 +KP  +T+  ++ +  R   FE+A   L E+
Sbjct: 710 GGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEARGFLSEV 763



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 206/489 (42%), Gaps = 116/489 (23%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILG---RLGKVDLAKNI 215
           Y  LL+  G  G +++A++        E  +N     A     + G   R G  + A   
Sbjct: 283 YNALLQVFGKAGNYTEALRVLG-----EMEQNGCQPDAVTYNELAGTYARAGFFEEAARC 337

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
            +T  ++G     + ++ +++AYG  G   EA+++F+ MK+    PN+ TYN V+   GK
Sbjct: 338 LDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGK 397

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL-------WEAARN-------- 320
               F  ++E+  +M R+G  P+R+T+N++LAVC + G+        E  R+        
Sbjct: 398 KS-RFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRD 456

Query: 321 --------------------LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
                               ++NEM   G    I TYN LL+ + +      A  I+++M
Sbjct: 457 TYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKM 516

Query: 361 PAKNISPNVVTYSTMIDGYAKAG------------------------------------R 384
             K   PN  +YS ++  YAK G                                    R
Sbjct: 517 RTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRR 576

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI--------- 435
           LD     F E+K  G   D V +N++LSIYAK G + +A  V   ++ SG+         
Sbjct: 577 LDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNS 636

Query: 436 ---------------------------RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
                                      + D V+YN ++ G+ KQG   E +R+  +M AD
Sbjct: 637 LMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVAD 696

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            ++P  +TY TL+  YS   ++ EA ++     Q GLK   + Y  ++++ C+    E A
Sbjct: 697 GMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEA 756

Query: 529 VSLLDEMTK 537
              L E+++
Sbjct: 757 RGFLSEVSE 765



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 158/356 (44%), Gaps = 38/356 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           M+++ G+ G  D    + E   + G   +   ++ LI+AYGR G    A  ++N M    
Sbjct: 426 MLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAG 485

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG----- 313
             P + TYNA+++   + G D+     I   M   G +P+  +++ LL   ++GG     
Sbjct: 486 FTPCITTYNALLNVLSRQG-DWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGI 544

Query: 314 ---------------LWEAARNL----------------FNEMVHRGIDQDIFTYNTLLD 342
                           W   R L                F E+  RG + D+  +N++L 
Sbjct: 545 AAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLS 604

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF-LGIG 401
              K      A E+   +    +SP+++TY++++D YAK     +A  + +++K    + 
Sbjct: 605 IYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMK 664

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D VSYNTV++ + K G  +EA  V  EM + G+   AVTY+ L+GGY     + E R +
Sbjct: 665 PDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREV 724

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              M    + P  LTY  +++ Y +   ++EA     E  +  L  D     A I+
Sbjct: 725 IGYMVQHGLKPMELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFDKKALEAYIE 780


>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
          Length = 793

 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 150/596 (25%), Positives = 272/596 (45%), Gaps = 37/596 (6%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF- 216
           D   LL+ L   G W  A+    +A   +E   D   L   ++  LGR G+ D+  ++  
Sbjct: 112 DLPSLLKALELSGHWEWALALLRWA--SDEGAADAAAL-EMVVRALGREGQHDVVCDLLD 168

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           E  L  G    V A++ ++ A  R+G  + A+ +F  ++R  + P +VTYN V+D  G+ 
Sbjct: 169 EMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRM 228

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G  +  +V + ++M   GV+PD  T ++++A C R GL + A   F ++  RG    + T
Sbjct: 229 GRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVT 288

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN LL    K      A  ++ EM      P+ VTY+ +   YA+AG  ++A      M 
Sbjct: 289 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 348

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  +  +YNTV++ YA +GR +EAL +   M+ +G   +  TYN + G  GK+ ++ 
Sbjct: 349 SKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFT 408

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
            +  M E+M     +PN +T++T++ V  K G+     ++    K  G++     Y+ LI
Sbjct: 409 AMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLI 468

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
            A  + G    A  + DEM   G  P + TYN++++   R                 Q +
Sbjct: 469 SAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSR-----------------QGD 511

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
            +   ++ S   K ++   + ++Q   +  Q  A+       E+           + +++
Sbjct: 512 WSTAQSIVS---KMLKNGFKPNDQSYSLLLQCYAKGGNAAGIES-----------IEKEV 557

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL--FDNQVYGVAHGLLMGYRDNIW 694
           +   I P+ V    ++ A  +C   E      +E++   +   +      L M  ++ ++
Sbjct: 558 YVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLY 617

Query: 695 VQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
            +A  +FD +K    S     YN+L DM     +   A+ ++ + K  QV  +V S
Sbjct: 618 SKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVS 673



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 218/434 (50%), Gaps = 42/434 (9%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           Y  LL+  G  G +++A++     +K  E    Q    +   +     R G  + A    
Sbjct: 289 YNALLQVFGKAGNYTEALR----VLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCL 344

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           +T  ++G     + ++ +++AY   G   EA+++F+ MK+    PN+ TYN +    GK 
Sbjct: 345 DTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKK 404

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
              F  ++E+ ++M R+G  P+R+T+N++LAVC + G+ +    + N M   G++    T
Sbjct: 405 S-RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDT 463

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YNTL+ A  +      AF++  EM +   +P + TY+ +++  ++ G    A ++ S+M 
Sbjct: 464 YNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKML 523

Query: 397 FLGIGLDRVSYNTVLSIYAKLG-----------------------------------RFE 421
             G   +  SY+ +L  YAK G                                   R E
Sbjct: 524 KNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLE 583

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
                 +E+++ G + D V +N++L  Y K G Y +   MF+ +K   +SP+L+TY++L+
Sbjct: 584 GVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLM 643

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           D+Y+K     EA +I ++ K + +K DVV Y+ +I+  CK GL++ A  +L EM  +G+ 
Sbjct: 644 DMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMA 703

Query: 542 PNVVTYNSIIDAFG 555
           P VVTY++++  + 
Sbjct: 704 PCVVTYHTLVGGYA 717



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 174/340 (51%), Gaps = 1/340 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + M+++ G+ G  D    +     + G   +   ++ LISAYGR G    A  +++ M  
Sbjct: 430 NTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMIS 489

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P L TYNA+++   + G D+     I   ML+NG +P+  +++ LL   ++GG   
Sbjct: 490 SGFTPCLTTYNALLNVLSRQG-DWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAA 548

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
              ++  E+    I        TL+ A  K  +++   +   E+ A+   P++V +++M+
Sbjct: 549 GIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSML 608

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             YAK G    A  MF  +K  G+  D ++YN+++ +YAK     EA  + K+++SS ++
Sbjct: 609 AMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVK 668

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D V+YN ++ G+ KQG   E +R+  +M AD ++P ++TY TL+  Y+   ++ EA ++
Sbjct: 669 PDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREV 728

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
                   LK   + Y  ++D+ CK    + A   L E++
Sbjct: 729 VNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEIS 768



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 201/442 (45%), Gaps = 36/442 (8%)

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
           R    SLL      G WE A  L       G   D      ++ A+ +  Q D+  +++ 
Sbjct: 110 RSDLPSLLKALELSGHWEWALALLRWASDEGA-ADAAALEMVVRALGREGQHDVVCDLLD 168

Query: 359 EMPAKNISP-NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
           EMP    S  +V  Y+T++   ++AGR + AL +F+E++  G+    V+YN VL +Y ++
Sbjct: 169 EMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRM 228

Query: 418 GR-FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
           GR +   + + +EM ++G+  D  T + ++   G+ G  D+    FE +KA    P ++T
Sbjct: 229 GRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVT 288

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y+ L+ V+ K G Y EA+++ +E + +G + D V Y+ L     + G  E A   LD MT
Sbjct: 289 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 348

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
            +G+ PN  TYN+++ A+         VD+      + K++  +  +             
Sbjct: 349 SKGLLPNTFTYNTVMTAYANVGR----VDEALALFDRMKKNGYVPNV------------- 391

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
             N    +FG L       GKK          +L + ++M +    PN VT++ +L  C 
Sbjct: 392 --NTYNLIFGML-------GKK-----SRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCG 437

Query: 657 RCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASA 714
           +    +  + +L  ++    ++    +  L+    R      A  ++DE+     +    
Sbjct: 438 KRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLT 497

Query: 715 FYNALTDMLWHFGQKRGAQLVV 736
            YNAL ++L   G    AQ +V
Sbjct: 498 TYNALLNVLSRQGDWSTAQSIV 519


>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
           [Oryza sativa Japonica Group]
 gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 793

 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 150/596 (25%), Positives = 272/596 (45%), Gaps = 37/596 (6%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF- 216
           D   LL+ L   G W  A+    +A   +E   D   L   ++  LGR G+ D+  ++  
Sbjct: 112 DLPSLLKALELSGHWEWALALLRWA--SDEGAADAAAL-EMVVRALGREGQHDVVCDLLD 168

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           E  L  G    V A++ ++ A  R+G  + A+ +F  ++R  + P +VTYN V+D  G+ 
Sbjct: 169 EMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRM 228

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G  +  +V + ++M   GV+PD  T ++++A C R GL + A   F ++  RG    + T
Sbjct: 229 GRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVT 288

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN LL    K      A  ++ EM      P+ VTY+ +   YA+AG  ++A      M 
Sbjct: 289 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 348

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  +  +YNTV++ YA +GR +EAL +   M+ +G   +  TYN + G  GK+ ++ 
Sbjct: 349 SKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFT 408

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
            +  M E+M     +PN +T++T++ V  K G+     ++    K  G++     Y+ LI
Sbjct: 409 AMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLI 468

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
            A  + G    A  + DEM   G  P + TYN++++   R                 Q +
Sbjct: 469 SAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSR-----------------QGD 511

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
            +   ++ S   K ++   + ++Q   +  Q  A+       E+           + +++
Sbjct: 512 WSTAQSIVS---KMLKNGFKPNDQSYSLLLQCYAKGGNAAGIES-----------IEKEV 557

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL--FDNQVYGVAHGLLMGYRDNIW 694
           +   I P+ V    ++ A  +C   E      +E++   +   +      L M  ++ ++
Sbjct: 558 YVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLY 617

Query: 695 VQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
            +A  +FD +K    S     YN+L DM     +   A+ ++ + K  QV  +V S
Sbjct: 618 SKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVS 673



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 218/434 (50%), Gaps = 42/434 (9%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           Y  LL+  G  G +++A++     +K  E    Q    +   +     R G  + A    
Sbjct: 289 YNALLQVFGKAGNYTEALR----VLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCL 344

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           +T  ++G     + ++ +++AY   G   EA+++F+ MK+    PN+ TYN +    GK 
Sbjct: 345 DTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKK 404

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
              F  ++E+ ++M R+G  P+R+T+N++LAVC + G+ +    + N M   G++    T
Sbjct: 405 S-RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDT 463

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YNTL+ A  +      AF++  EM +   +P + TY+ +++  ++ G    A ++ S+M 
Sbjct: 464 YNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKML 523

Query: 397 FLGIGLDRVSYNTVLSIYAKLG-----------------------------------RFE 421
             G   +  SY+ +L  YAK G                                   R E
Sbjct: 524 KNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLE 583

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
                 +E+++ G + D V +N++L  Y K G Y +   MF+ +K   +SP+L+TY++L+
Sbjct: 584 GVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLM 643

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           D+Y+K     EA +I ++ K + +K DVV Y+ +I+  CK GL++ A  +L EM  +G+ 
Sbjct: 644 DMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMA 703

Query: 542 PNVVTYNSIIDAFG 555
           P VVTY++++  + 
Sbjct: 704 PCVVTYHTLVGGYA 717



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 174/340 (51%), Gaps = 1/340 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + M+++ G+ G  D    +     + G   +   ++ LISAYGR G    A  +++ M  
Sbjct: 430 NTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMIS 489

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P L TYNA+++   + G D+     I   ML+NG +P+  +++ LL   ++GG   
Sbjct: 490 SGFTPCLTTYNALLNVLSRQG-DWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAA 548

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
              ++  E+    I        TL+ A  K  +++   +   E+ A+   P++V +++M+
Sbjct: 549 GIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSML 608

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             YAK G    A  MF  +K  G+  D ++YN+++ +YAK     EA  + K+++SS ++
Sbjct: 609 AMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVK 668

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D V+YN ++ G+ KQG   E +R+  +M AD ++P ++TY TL+  Y+   ++ EA ++
Sbjct: 669 PDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREV 728

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
                   LK   + Y  ++D+ CK    + A   L E++
Sbjct: 729 VNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEIS 768



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 201/442 (45%), Gaps = 36/442 (8%)

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
           R    SLL      G WE A  L       G   D      ++ A+ +  Q D+  +++ 
Sbjct: 110 RSDLPSLLKALELSGHWEWALALLRWASDEGA-ADAAALEMVVRALGREGQHDVVCDLLD 168

Query: 359 EMPAKNISP-NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
           EMP    S  +V  Y+T++   ++AGR + AL +F+E++  G+    V+YN VL +Y ++
Sbjct: 169 EMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRM 228

Query: 418 GR-FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
           GR +   + + +EM ++G+  D  T + ++   G+ G  D+    FE +KA    P ++T
Sbjct: 229 GRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVT 288

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y+ L+ V+ K G Y EA+++ +E + +G + D V Y+ L     + G  E A   LD MT
Sbjct: 289 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 348

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
            +G+ PN  TYN+++ A+         VD+      + K++  +  +             
Sbjct: 349 SKGLLPNTFTYNTVMTAYANVGR----VDEALALFDRMKKNGYVPNV------------- 391

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
             N    +FG L       GKK          +L + ++M +    PN VT++ +L  C 
Sbjct: 392 --NTYNLIFGML-------GKK-----SRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCG 437

Query: 657 RCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASA 714
           +    +  + +L  ++    ++    +  L+    R      A  ++DE+     +    
Sbjct: 438 KRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLT 497

Query: 715 FYNALTDMLWHFGQKRGAQLVV 736
            YNAL ++L   G    AQ +V
Sbjct: 498 TYNALLNVLSRQGDWSTAQSIV 519


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 194/360 (53%), Gaps = 7/360 (1%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISV----FNSMKRY--NLKP 261
           ++  A  +F      G    V  +  LI     +G    A+ +     N + RY  N KP
Sbjct: 154 RISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKP 213

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           N++TYN ++D   K G +     ++F++M   G+ P  I++NSL+      G WE ++ L
Sbjct: 214 NVITYNIIVDGLCKVGRE-DEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRL 272

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            +EM+ +G+  D+ T+N L+D +CK  ++  A +++  M    I P++VTY+++I+G+  
Sbjct: 273 LDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCM 332

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G L+ A  +F  M   G   D +SYN +++ Y+K  + EEA+ +  EM   G R + +T
Sbjct: 333 VGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 392

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y++LL G    GK D+ +++F  MKA  ++ N  TY   +D   K     EAM++F E K
Sbjct: 393 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 452

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +  K ++   + LID LCK G +E+A  L ++++ EG  PNVVTY  +I  F R    +
Sbjct: 453 SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVD 512



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 139/523 (26%), Positives = 249/523 (47%), Gaps = 41/523 (7%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           ++ +F+ L+S   +  +  +  S++N M+   L  +  T N +++ C       +     
Sbjct: 68  SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN-CLCNVNRLREGFAA 126

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           F  +LR G  P+ +T+N+L+  +C    + EA R LF  M   G   D+ TY TL+  +C
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATR-LFLRMQKLGCTPDVVTYGTLIKGLC 185

Query: 346 KGAQMDLAFEIMAEMPAK------NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
               +++A ++  EM         N  PNV+TY+ ++DG  K GR D+A  +F EMK  G
Sbjct: 186 GTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQG 245

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           +    +SYN+++  +   G++EE+  +  EM   G++ D VT+N L+    K+GK  E +
Sbjct: 246 MIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAK 305

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++   M    + P+L+TY++LI+ +   G    A ++F      G + DV+ Y+ LI+  
Sbjct: 306 KLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGY 365

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
            K   VE A+ L +EM   G RPNV+TY+S++     +      VDD ++     K    
Sbjct: 366 SKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGK----VDDAKKLFSVMKAHGI 421

Query: 580 ----------LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI 629
                     LD +C  D   + EA       +K+F +L +       +   C  + LC 
Sbjct: 422 AENSYTYGIFLDGLCKNDC--LFEA-------MKLFTELKSSNFKLEIENLNCLIDGLCK 472

Query: 630 LG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA 682
            G       +F+K+     +PNVVT++ +++   R    + A++L++++         + 
Sbjct: 473 AGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIIT 532

Query: 683 HGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
           +  LM   Y  N   + + L   +   D S  +   + + DML
Sbjct: 533 YNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDML 575



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 221/469 (47%), Gaps = 41/469 (8%)

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C  G V   H +  F  M+R+   P   +FN LL+  ++   +    +L+N+M   G+  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D  T N LL+ +C   ++   F   A +  +  SPN+VTY+T+I G     R+ +A  +F
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS------GIRKDAVTYNALL 446
             M+ LG   D V+Y T++      G    AL + +EM +         + + +TYN ++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G  K G+ DE +++FE+MK   + P++++Y++LI  +   G ++E+ ++  E    GL+
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 282

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            D+V ++ LID LCK G V  A  LL  M + GI P++VTYNS+I+ F       C V D
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGF-------CMVGD 335

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ-LVAEKAGQGKKENRCRQE 625
           +         ++  +   S   K  +    + N +I  + + L  E+A            
Sbjct: 336 L---------NSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA------------ 374

Query: 626 ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGL 685
               + ++ +M  +  +PNV+T+ ++L         +DA  L   ++          +G+
Sbjct: 375 ----MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGI 430

Query: 686 LMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
            +    +++   +A+ LF E+K  +        N L D L   G+   A
Sbjct: 431 FLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETA 479



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 191/356 (53%), Gaps = 5/356 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L ++G+ D AK +FE    +G   ++ ++++LI  +  +G  +E+  + + M    L+P+
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPD 284

Query: 263 LVTYNAVIDACGKGG--VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           +VT+N +ID   K G  ++ K ++ +   M+ +G+ PD +T+NSL+      G   +AR 
Sbjct: 285 MVTFNVLIDTLCKEGKVIEAKKLLGV---MIESGIVPDLVTYNSLIEGFCMVGDLNSARE 341

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           LF  M  +G + D+ +YN L++   K  +++ A ++  EM      PNV+TY +++ G  
Sbjct: 342 LFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIF 401

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
            AG++DDA  +FS MK  GI  +  +Y   L    K     EA+ +  E++SS  + +  
Sbjct: 402 LAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIE 461

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
             N L+ G  K GK +    +FE++  +   PN++TY+ +I  + + G   +A  + ++ 
Sbjct: 462 NLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM 521

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           +  G   D++ Y+ L+    ++  +E  V LL  M ++ + P+ +T + ++D   +
Sbjct: 522 EANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK 577



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 189/373 (50%), Gaps = 19/373 (5%)

Query: 157 DDYTFLLRELGNRG------EWSKAIQCFAFAVKREERKN------DQGKLA-----SAM 199
           D+   L  E+  +G       ++  I  F  A K EE K       DQG        + +
Sbjct: 232 DEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVL 291

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I  L + GKV  AK +    +  G    +  +++LI  +   G    A  +F SM     
Sbjct: 292 IDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC 351

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           +P++++YN +I+   K  +  +  ++++++ML  G +P+ IT++SLL      G  + A+
Sbjct: 352 EPDVISYNVLINGYSKT-LKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAK 410

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            LF+ M   GI ++ +TY   LD +CK   +  A ++  E+ + N    +   + +IDG 
Sbjct: 411 KLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGL 470

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            KAG+L+ A  +F ++   G   + V+Y  ++  + + G+ ++A ++ ++ME++G   D 
Sbjct: 471 CKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDI 530

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           +TYN L+ G+ +  K +EV ++  +M    VSP+ +T S ++D+ SK   Y+E + +   
Sbjct: 531 ITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPR 590

Query: 500 FK-QAGLKADVVL 511
           F  Q G+   +++
Sbjct: 591 FPIQKGVDKHLLM 603


>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Vitis vinifera]
 gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 210/398 (52%), Gaps = 1/398 (0%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           +Y+F+++ L    +   ++    +A    ++    G+L + +I    + G V+ A +   
Sbjct: 221 NYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLA 280

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                G         A+I+A G +G  +EA ++F  +K   L P    YNA++    K G
Sbjct: 281 MVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTG 340

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              K    I  +M R+G  PD  T++ L+   +  G WE+AR +  EM   G+  + + +
Sbjct: 341 -SLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVF 399

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           + +L +     +   +F+++ EM    +SP+   Y+ MID + K   LD AL  F  M+ 
Sbjct: 400 SRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRM 459

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  D V++NT++  + K G   +A  + + M+ SG      TYN ++  +G+Q ++++
Sbjct: 460 EGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWED 519

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
           V+ +  +M++  +  N++TY+TL+D+Y + G +K+A++     K  GLK    +Y+ALI+
Sbjct: 520 VKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALIN 579

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           A  + GL E A++    M  +G++P+V+  NS+I+AFG
Sbjct: 580 AYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFG 617



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 183/380 (48%), Gaps = 34/380 (8%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+I+ LG  G+ + A+ IFE     G      A++AL+  Y ++G  ++A S+ + M+R 
Sbjct: 296 AVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERS 355

Query: 258 NLKPNLVTYNAVIDACGKGGV----------------------------------DFKHV 283
              P+  TY+ +IDA    G                                    ++  
Sbjct: 356 GFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKS 415

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
            ++  +M  +GV PDR  +N ++    +    + A   F+ M   G+  D  T+NTL+D 
Sbjct: 416 FQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDC 475

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            CK    + A E+   M     SP   TY+ MI+ + +  R +D   +  +M+  G+  +
Sbjct: 476 HCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLAN 535

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V+Y T++ IY + GRF++A+   + M+S G++  +  YNAL+  Y ++G  ++    F 
Sbjct: 536 VVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFR 595

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
            M+AD + P++L  ++LI+ + +     EA  + +  K+  LK DVV Y+ L+ AL +  
Sbjct: 596 VMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVE 655

Query: 524 LVESAVSLLDEMTKEGIRPN 543
             +   ++ +EMT  G  P+
Sbjct: 656 KFDKVPAVYEEMTLSGCTPD 675



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 126/524 (24%), Positives = 246/524 (46%), Gaps = 20/524 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  LG R E  K  + F  +    +R+       +A+I    R   ++ A N+   
Sbjct: 157 YSILIHALG-RSE--KLYEAFLLS----QRQTLTPLTYNALIGACARNDDLEKALNLMSR 209

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAI--SVFNSMKRYNLKPNLVTYNAVIDACGKG 276
              +G+ +    +S +I +  R+     ++   ++  ++   ++ +    N +I    K 
Sbjct: 210 MRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKS 269

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G D    +     +  NG+ P   T  +++      G  E A  +F E+   G+      
Sbjct: 270 G-DVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRA 328

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN LL    K   +  A  I++EM     SP+  TYS +ID YA AGR + A  +  EM+
Sbjct: 329 YNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEME 388

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  +   ++ +L+ Y   G+++++  V +EM +SG+  D   YN ++  +GK    D
Sbjct: 389 ASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLD 448

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
                F++M+ + V P+ +T++TLID + K G + +A ++F   +++G       Y+ +I
Sbjct: 449 HALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMI 508

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQ 574
           ++  +    E   +LL +M  +G+  NVVTY +++D +G+S   +  ++  +V + +G +
Sbjct: 509 NSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLK 568

Query: 575 KESANLDAMC-SQDDKDVQEAGRTDNQIIKVFGQ----LVAEKAGQGKKENRCRQEILCI 629
             S   +A+  +   + + E      ++++  G     LV         E+R   E   +
Sbjct: 569 PSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSV 628

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
           L   Q M +  +KP+VVT++ ++ A  R   F+    + EE+ L
Sbjct: 629 L---QYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTL 669



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 160/323 (49%), Gaps = 5/323 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I      G+ + A+ + +     G     Y FS ++++Y   G  Q++  V   M+ 
Sbjct: 365 SLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRN 424

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P+   YN +ID  GK      H +  FD M   GVQPD +T+N+L+    + G   
Sbjct: 425 SGVSPDRHFYNVMIDTFGKCNC-LDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHN 483

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF  M   G      TYN ++++  +  + +    ++ +M ++ +  NVVTY+T++
Sbjct: 484 KAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLV 543

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y ++GR  DA+     MK +G+      YN +++ YA+ G  E+A+   + M + G++
Sbjct: 544 DIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLK 603

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              +  N+L+  +G+  +  E   + + MK + + P+++TY+TL+    +   + +   +
Sbjct: 604 PSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAV 663

Query: 497 FREFKQAGL----KADVVLYSAL 515
           + E   +G     KA  +L SAL
Sbjct: 664 YEEMTLSGCTPDRKARAMLRSAL 686



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 204/470 (43%), Gaps = 87/470 (18%)

Query: 247 AISVFNSMKRYNLKPNL-VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A S+   ++R+NL  +  + Y+ +I A G+     + + E F    R  + P  +T+N+L
Sbjct: 137 AYSLVTWLERHNLCFSYELLYSILIHALGRS----EKLYEAFLLSQRQTLTP--LTYNAL 190

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY---------------------------- 337
           +  C+R    E A NL + M   G   D   Y                            
Sbjct: 191 IGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESD 250

Query: 338 ---------NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
                    N ++    K   ++ A   +A +    +SP   T   +I     AGR ++A
Sbjct: 251 KIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEA 310

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             +F E+K  G+     +YN +L  Y K G  ++A  +  EME SG   D  TY+ L+  
Sbjct: 311 EAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDA 370

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           Y   G+++  R + ++M+A  V PN   +S ++  Y   G ++++ Q+ RE + +G+  D
Sbjct: 371 YANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPD 430

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
              Y+ +ID   K   ++ A++  D M  EG++P+ VT+N++ID   +S           
Sbjct: 431 RHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKS----------- 479

Query: 569 RDLGKQKESANL-DAMCSQDDKDVQEAG-----RTDNQIIKVFGQLVAEKAGQGKKENRC 622
              G   ++  L +AM        QE+G      T N +I  FG            E   
Sbjct: 480 ---GHHNKAEELFEAM--------QESGCSPCTTTYNIMINSFG------------EQER 516

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            +++  +LG   KM    +  NVVT++ +++   +   F+DA   LE ++
Sbjct: 517 WEDVKTLLG---KMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMK 563



 Score = 43.5 bits (101), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 119/291 (40%), Gaps = 53/291 (18%)

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
           C S  LL YS LI    +     EA  + +      L      Y+ALI A  +N  +E A
Sbjct: 150 CFSYELL-YSILIHALGRSEKLYEAFLLSQRQTLTPLT-----YNALIGACARNDDLEKA 203

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           ++L+  M ++G   + V Y+ II +  R+  ++ ++         QK  A +++     D
Sbjct: 204 LNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSM--------LQKIYAEIES-----D 250

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
           K ++  G+  N II  F      K+G     NR    +  + G         + P   T 
Sbjct: 251 K-IELDGQLLNDIIVGFA-----KSGD---VNRAMSFLAMVQGN-------GLSPKTATL 294

Query: 649 SAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEV 704
            A++ A       E+A  + EEL+    +   + Y   + LL GY     V+  SL D  
Sbjct: 295 VAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAY---NALLKGY-----VKTGSLKDAE 346

Query: 705 KLMDSSTASAF------YNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVW 749
            ++     S F      Y+ L D   + G+   A++V+ E +   V  N +
Sbjct: 347 SIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSY 397


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 252/513 (49%), Gaps = 43/513 (8%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V +F+ +I  + + G   +A ++FN M +  + P++ TYN+++DA C    +D    V  
Sbjct: 232 VVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFV-- 289

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M+  GV+PD +T+N+++   S  G W+ +  +F +M  +G+  D  T+++ + ++CK
Sbjct: 290 LRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCK 349

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +   A EI   M  K   P++V+YS ++ GYA  GR  D  N+F  M   GI  +   
Sbjct: 350 HGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHC 409

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
            N ++S +AK G  +EA+LV  EM+  G+R + VTY+ L+  + + G+  +    F QM 
Sbjct: 410 INILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMI 469

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL-KADVVLYSALIDALCKNGLV 525
           +  + PN   Y +LI  +   G   +A +   E    GL + ++V +S++I +LC  G V
Sbjct: 470 SIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRV 529

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
             A  + + +   G RP +VT+NS+ID +       C V  +E+  G       LDAM S
Sbjct: 530 MDAQDVFNLVIHIGDRPTIVTFNSLIDGY-------CLVGKMEKAFGV------LDAMVS 576

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
                ++    T+N        LV+     GK ++         L +F++M   K+KP  
Sbjct: 577 V---GIEPDVVTNN-------TLVSGYCKSGKIDDG--------LILFREMLHKKVKPTT 618

Query: 646 VTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVYGVAHGLLMGY-RDNIWVQALSL 700
           VT++ +L+   R      A  +  E+       D   Y +   LL G  R+++  +A++L
Sbjct: 619 VTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKI---LLKGLCRNDLTDEAITL 675

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           F ++  MD        N + + L+   ++  A 
Sbjct: 676 FHKLGAMDCKFDITILNTMINALYKVRRREEAN 708



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 226/484 (46%), Gaps = 27/484 (5%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRYNLKPNL 263
           R  + DL        L  G        +  +     +    EA+ V  + M   +  P+ 
Sbjct: 136 RARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDA 195

Query: 264 VTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNG--VQPDRITFNSLLAVCSRGGLWEAARN 320
           ++YN VI + CG      +  +++   M + G    PD ++FN+++    + G    A N
Sbjct: 196 ISYNTVIKSLCGDS--RSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 253

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           LFNEMV +G+  D+ TYN+++DA+CK   MD A  ++ +M  K + P+ VTY+ +I GY+
Sbjct: 254 LFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYS 313

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
            +G   ++  MF +M   G+  D V++++ +S   K GR ++A  + + M + G   D V
Sbjct: 314 CSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIV 373

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           +Y+ LL GY  +G++ ++  +F  M    +  N    + LI  ++K G+  EAM +F E 
Sbjct: 374 SYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEM 433

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           +  G++ +VV YS LI A C+ G +  A+    +M   GI PN   Y+S+I  F      
Sbjct: 434 QGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDL 493

Query: 561 ECTVDDVERDLGKQKESAN-------LDAMCSQ----DDKDVQE--AGRTDNQIIKVFGQ 607
               + +   + K     N       + ++C +    D +DV        D   I  F  
Sbjct: 494 VKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNS 553

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
           L+      GK E           GV   M  + I+P+VVT + +++   +    +D  +L
Sbjct: 554 LIDGYCLVGKMEKA--------FGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLIL 605

Query: 668 LEEL 671
             E+
Sbjct: 606 FREM 609



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 203/410 (49%), Gaps = 6/410 (1%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDL 211
           C  D  +F  ++     +GE SKA   F   V++     D G   S ++  L +   +D 
Sbjct: 228 CSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVP-DVGTYNS-IVDALCKARAMDK 285

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ +    +++G       ++A+I  Y  SG+ +E+  +F  M    L P+ VT+++ + 
Sbjct: 286 AEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMS 345

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           +  K G   K   EIF  M   G  PD ++++ LL   +  G +    NLF+ M  +GI 
Sbjct: 346 SLCKHGRS-KDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIV 404

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            +    N L+ A  K   MD A  +  EM  + + PNVVTYST+I  + + GRL DA+  
Sbjct: 405 SNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEK 464

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI-RKDAVTYNALLGGYG 450
           FS+M  +GI  +   Y++++  +   G   +A     EM S G+ R + V +++++    
Sbjct: 465 FSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLC 524

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
            +G+  + + +F  +      P ++T+++LID Y   G  ++A  +       G++ DVV
Sbjct: 525 IEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVV 584

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
             + L+   CK+G ++  + L  EM  + ++P  VTYN ++D   R+  T
Sbjct: 585 TNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRT 634



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 187/359 (52%), Gaps = 2/359 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S+ +S L + G+   A+ IF+    +G+   + ++S L+  Y   G   +  ++F+SM  
Sbjct: 341 SSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMAD 400

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +  N    N +I A  K G+     + +F +M   GV+P+ +T+++L++   R G   
Sbjct: 401 KGIVSNCHCINILISAHAKRGM-MDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLA 459

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI-SPNVVTYSTM 375
            A   F++M+  GI+ +   Y++L+   C    +  A E ++EM +K +  PN+V +S++
Sbjct: 460 DAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSI 519

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I      GR+ DA ++F+ +  +G     V++N+++  Y  +G+ E+A  V   M S GI
Sbjct: 520 IHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGI 579

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VT N L+ GY K GK D+   +F +M    V P  +TY+ ++D   + G    A +
Sbjct: 580 EPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKK 639

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +F E   +G   D+  Y  L+  LC+N L + A++L  ++     + ++   N++I+A 
Sbjct: 640 MFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINAL 698



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 180/356 (50%), Gaps = 6/356 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +IS   + G +D A  +F     +G    V  +S LISA+ R G   +A+  F+ M    
Sbjct: 413 LISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIG 472

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGV-QPDRITFNSLL-AVCSRGGLW 315
           ++PN   Y+++I   C  G  D     E   +M+  G+ +P+ + F+S++ ++C  G + 
Sbjct: 473 IEPNTAVYHSLIHGFCMHG--DLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVM 530

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +A +++FN ++H G    I T+N+L+D  C   +M+ AF ++  M +  I P+VVT +T+
Sbjct: 531 DA-QDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTL 589

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + GY K+G++DD L +F EM    +    V+YN VL    + GR   A  +  EM  SG 
Sbjct: 590 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGT 649

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  TY  LL G  +    DE   +F ++ A     ++   +T+I+   K    +EA  
Sbjct: 650 AVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEAND 709

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +F     +GL  +V  Y  +I  L K G VE A ++   M K G  P+    N II
Sbjct: 710 LFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 765



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 183/429 (42%), Gaps = 81/429 (18%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN-------LFNEMVH-----RGIDQD 333
           +FD++LR G      + N  LA  +R     +  N       LFN +       R     
Sbjct: 64  LFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPALVLALFNRICREEAGPRVAPLT 123

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN-MF 392
           + TY  L+D  C+  + DL    +A +    +    +  +T +     A R D+A++ + 
Sbjct: 124 VRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLL 183

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR--KDAVTYNALLGGYG 450
             M  L    D +SYNTV+       R +EAL + + M   G R   D V++N ++ G+ 
Sbjct: 184 HRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 243

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV--------------------------- 483
           KQG+  +   +F +M    V P++ TY++++D                            
Sbjct: 244 KQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGV 303

Query: 484 --------YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
                   YS  G +KE+ ++FR+    GL  D V +S+ + +LCK+G  + A  +   M
Sbjct: 304 TYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYM 363

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
           T +G  P++V+Y+ ++  +     TE          G+  +  NL    S  DK +    
Sbjct: 364 TTKGHMPDIVSYSILLHGYA----TE----------GRFADMNNL--FHSMADKGIV--- 404

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
            ++   I +   L++  A +G  +          + VF +M    ++PNVVT+S +++A 
Sbjct: 405 -SNCHCINI---LISAHAKRGMMDEA--------MLVFTEMQGQGVRPNVVTYSTLISAF 452

Query: 656 SRCNSFEDA 664
            R     DA
Sbjct: 453 CRMGRLADA 461



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 148/302 (49%), Gaps = 3/302 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++I  L   G+V  A+++F   ++ G   T+  F++LI  Y   G  ++A  V ++M  
Sbjct: 517 SSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS 576

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             ++P++VT N ++   C  G +D   +  +F +ML   V+P  +T+N +L    R G  
Sbjct: 577 VGIEPDVVTNNTLVSGYCKSGKIDDGLI--LFREMLHKKVKPTTVTYNIVLDGLLRAGRT 634

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            AA+ +F+EM+  G   DI TY  LL  +C+    D A  +  ++ A +   ++   +TM
Sbjct: 635 SAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTM 694

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+   K  R ++A ++F+ +   G+  +  +Y  ++    K G  EEA  +   ME SG 
Sbjct: 695 INALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGC 754

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
              +   N ++    ++G   +      ++    +S    T S L+ ++S  G ++E ++
Sbjct: 755 APSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIK 814

Query: 496 IF 497
             
Sbjct: 815 FL 816


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 227/459 (49%), Gaps = 33/459 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L + GK++ A+++F+  L+ G   +  A+++LI     +    +A  +F  M R  
Sbjct: 16  LIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 75

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             P+ VTYN +IDA  K G+  +   ++   M+ +G  PD +T+N+++    + G  E A
Sbjct: 76  CPPSPVTYNVIIDASCKRGM-LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEA 134

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             LFNEM   G   +  ++NT++  +C+ +++D A ++  EM A++I P+  +Y  +IDG
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDG 194

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
            AKAG+L++A  +F  M   GI    V+YN V+         +EAL + K M S G R  
Sbjct: 195 LAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
             T+N L+  + K+GK DE  R+ ++M  D   P+++TYSTLI          +A  +  
Sbjct: 255 RFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +  +   K  VV  + LI  LCK G ++ A  +LD M   G  P+VVTYN+++    R+ 
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
            TE           + +E  +          D+   G   N +   +  LV+      + 
Sbjct: 375 QTE-----------RARELLS----------DMVARGLAPNVV--TYTALVSGLCKANRL 411

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSA-ILNACS 656
              C        GVF +M      PN+ T++A IL  CS
Sbjct: 412 PEAC--------GVFAQMKSSGCAPNLFTYTALILGFCS 442



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 249/519 (47%), Gaps = 46/519 (8%)

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           M   N+ P+  +Y  +ID   K G       ++F  +L +GV P  + + SL+       
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAG-KLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMAN 59

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            ++ AR LF +M  RG      TYN ++DA CK   ++ A +++ +M      P+VVTY+
Sbjct: 60  SFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T++DG  K+GR+++AL +F+EM+ LG   +R S+NT++    +  + ++A  V  EME+ 
Sbjct: 120 TVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAR 179

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            I  D+ +Y  L+ G  K GK +E  ++F +M    ++P+ +TY+ +I          EA
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEA 239

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           +++F+  +  G +     ++ LIDA CK G ++ A  LL  MT +G  P+VVTY+++I  
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISG 299

Query: 554 FGRSATTECTVDDVE---RDLGKQK-------ESANLDAMCS----QDDKDVQEAGRTDN 599
               A     VDD      D+ K++       ++  +  +C     ++ ++V +A  +  
Sbjct: 300 LCSIA----RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355

Query: 600 QIIKV--FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
           Q   V  +  LV      G+ E R R+       +   M    + PNVVT++A+++   +
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTE-RARE-------LLSDMVARGLAPNVVTYTALVSGLCK 407

Query: 658 CNSFEDASMLLEELR-------LFDNQVYGVAHGLLMGYRDNIWVQ-ALSLFDEVKLMDS 709
            N   +A  +  +++       LF          L++G+     V   L LF E+     
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLF------TYTALILGFCSAGQVDGGLKLFGEMVCAGI 461

Query: 710 STASAFYNALTDMLWHFGQKRGAQLVVLEGK---RRQVW 745
           S     Y  L   L   G+   A  ++ EG+   R + W
Sbjct: 462 SPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAW 500



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 181/375 (48%), Gaps = 40/375 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L + GK++ A  +F   L+ G   +   ++ +I     +    EA+ +F SM+   
Sbjct: 191 LIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            +P+  T+N +IDA C +G +D      +   M  +G  PD +T+++L++        + 
Sbjct: 251 CRPSRFTFNILIDAHCKRGKMD--EAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 308

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           AR+L  +MV R     + T NTL+  +CK  ++  A E++  M +   SP+VVTY+T++ 
Sbjct: 309 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 368

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+ +AG+ + A  + S+M   G+  + V+Y  ++S   K  R  EA  V  +M+SSG   
Sbjct: 369 GHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +  TY AL+ G+   G+ D   ++F +M    +SP+ + Y TL     K G    A++I 
Sbjct: 429 NLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488

Query: 498 REFKQA----------------------------GLKADVVL---------YSALIDALC 520
           RE +++                            G   D+V           ++L+  LC
Sbjct: 489 REGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLC 548

Query: 521 KNGLVESAVSLLDEM 535
           K+G    A ++L+E+
Sbjct: 549 KSGQGGEARAVLEEI 563



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 5/202 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L + G++  A+ + +  ++ G    V  ++ L+  + R+G  + A  + + M  
Sbjct: 329 NTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA 388

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL-LAVCSRGGLW 315
             L PN+VTY A++    K          +F  M  +G  P+  T+ +L L  CS G + 
Sbjct: 389 RGLAPNVVTYTALVSGLCKAN-RLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV- 446

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE--MPAKNISPNVVTYS 373
           +    LF EMV  GI  D   Y TL   +CK  +   A EI+ E     ++ +     Y 
Sbjct: 447 DGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYR 506

Query: 374 TMIDGYAKAGRLDDALNMFSEM 395
             +DG   AG+++ AL    +M
Sbjct: 507 FAVDGLLDAGKMEMALGFVRDM 528


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 212/391 (54%), Gaps = 16/391 (4%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASA-----MISILGRLGKVDLAKNIFETALNEGY 224
           GE   A++ F       +R  D G   SA     M+  L + G++ + +++++  +    
Sbjct: 173 GEMDLALEGF-------DRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRI 225

Query: 225 GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVV 284
           G  V  F  +I+   + G  Q+A  V   MK +   P+++TYN +ID   K G  FK   
Sbjct: 226 GVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK-AD 284

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
            +  +M+   + P+ ITFN L+    R     AA+ +F EM  +G+  ++ TYN+L++ +
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C   ++D A  +  +M    + PNVVTY+ +I+G+ K   L +A  M  ++   G+  + 
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           +++NT++  Y K GR ++A L+   M  +G+  +  TYN L+ G+ ++G   E R++ ++
Sbjct: 405 ITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKE 464

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE---FKQAGLKADVVLYSALIDALCK 521
           M+ + +  +L+TY+ L+D   K G  ++A+++  E    ++ G +A++V Y+ LI   C 
Sbjct: 465 MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCN 524

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            G +E A  LL+EM ++G+ PN  TY+ + D
Sbjct: 525 KGKLEEANRLLNEMLEKGLIPNRTTYDILRD 555



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/358 (32%), Positives = 197/358 (55%), Gaps = 4/358 (1%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++DLA   F+ A + G+  +  + + ++ +  + G      SV+  M R  +  N+VT+
Sbjct: 173 GEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTF 232

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           + VI+   K G  F+   ++ +DM   G  P  IT+N+++    + G    A  L  EMV
Sbjct: 233 DVVINGLCKVG-KFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            + I  +  T+N L+D  C+   +  A ++  EM  + + PNVVTY+++I+G    G+LD
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +AL +  +M  +G+  + V+YN +++ + K    +EA  +  ++   G+  + +T+N L+
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
             YGK G+ D+   +   M    V PN+ TY+ LI  + + G  KEA ++ +E +  GLK
Sbjct: 412 DAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLK 471

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMT---KEGIRPNVVTYNSIIDAFGRSATTE 561
           AD+V Y+ L+DALCK G    AV LLDEMT   K+G R N+VTYN +I  F      E
Sbjct: 472 ADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLE 529



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 201/433 (46%), Gaps = 56/433 (12%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG---------LWEAARNLFNEMVHRG 329
           ++  +  + D   +N    +   F+SL  + S G          +W   +N   ++   G
Sbjct: 122 NYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEG 181

Query: 330 IDQ--------DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            D+           + N +L ++ K  ++ +   +  EM  + I  NVVT+  +I+G  K
Sbjct: 182 FDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCK 241

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G+   A ++  +MK  G     ++YNT++  Y K G+  +A  + KEM +  I  + +T
Sbjct: 242 VGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEIT 301

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           +N L+ G+ +       +++FE+M+   + PN++TY++LI+     G   EA+ +  +  
Sbjct: 302 FNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS 361

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             GLK +VV Y+ALI+  CK  +++ A  +LD++ K G+ PNV+T+N++IDA+G++    
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKA---- 417

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG---------QLVAEK 612
                     G+  ++  L +M    D  V     T N +I  F          +L  E 
Sbjct: 418 ----------GRMDDAFLLRSM--MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEM 465

Query: 613 AGQGKKENRCRQEIL----CILGVFQK----------MHKLKIKPNVVTFSAILNACSRC 658
            G G K +     IL    C  G  +K          M K   + N+VT++ ++      
Sbjct: 466 EGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNK 525

Query: 659 NSFEDASMLLEEL 671
              E+A+ LL E+
Sbjct: 526 GKLEEANRLLNEM 538



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 180/386 (46%), Gaps = 44/386 (11%)

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           N +    ++  Y K G +D AL  F      G  L  +S N +L    K GR      V 
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           KEM    I  + VT++ ++ G  K GK+ +   + E MKA   SP+++TY+T+ID Y K 
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G   +A  + +E     +  + + ++ LID  C++  V +A  + +EM ++G++PNVVTY
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 548 NSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
           NS+I+         C+   ++  LG Q + + +          ++    T N +I  F +
Sbjct: 338 NSLINGL-------CSNGKLDEALGLQDKMSGM---------GLKPNVVTYNALINGFCK 381

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA--- 664
                    KK  +  +E+L  +G      K  + PNV+TF+ +++A  +    +DA   
Sbjct: 382 ---------KKMLKEAREMLDDIG------KRGLAPNVITFNTLIDAYGKAGRMDDAFLL 426

Query: 665 -SMLLEELRLFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDM 722
            SM+L+     +   Y     L++G+ R+    +A  L  E++          YN L D 
Sbjct: 427 RSMMLDTGVCPNVSTYNC---LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDA 483

Query: 723 LWHFGQKRGA-----QLVVLEGKRRQ 743
           L   G+ R A     ++ ++E K R+
Sbjct: 484 LCKKGETRKAVRLLDEMTLMEKKGRR 509



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ + +     G    V  F+ LI AYG++G   +A  + + M    + PN+ TYN +I 
Sbjct: 388 AREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIV 447

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV--- 326
             C +G V  K   ++  +M  NG++ D +T+N L+ A+C +G   +A R L +EM    
Sbjct: 448 GFCREGNV--KEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVR-LLDEMTLME 504

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +G   +I TYN L+   C   +++ A  ++ EM  K + PN  TY  + D   + G + 
Sbjct: 505 KKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIP 564

Query: 387 D 387
           D
Sbjct: 565 D 565


>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
 gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
          Length = 669

 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 148/555 (26%), Positives = 264/555 (47%), Gaps = 43/555 (7%)

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
           +R T+N +L +   G   E +  L  EM  RGI  D +T++TL++   +  Q + A +  
Sbjct: 142 NRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWF 201

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
             M ++ I P+ VTY+++ID Y + GR+++A+ ++ ++K +   LD V+Y  + ++YA+ 
Sbjct: 202 ERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARA 261

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G ++  + + +EM  SG   +AV  N L+G   K GK ++ +++F +M+   VSP  +T 
Sbjct: 262 GDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTL 321

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           S L+++Y++ G Y +A +++   K  G K DV +Y++L+ A  + G VE A  +L EM +
Sbjct: 322 SILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKR 381

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
            G  P+ +TY + ++ +     T+  VD   R                  DK V   G+ 
Sbjct: 382 AGCNPDHLTYRTAMNTYA----TKGMVDPARRMF----------------DKVVALNGKP 421

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
           D  +  V  +   + AG+ ++ ++   E+         M      P+      +L+  + 
Sbjct: 422 DTPLFTVMIR-ACKLAGEIEQASKIFDEM---------MESGCCSPDERVSGMLLSCMAM 471

Query: 658 CNSFEDASMLLEELRLFDNQVYGVAHGLLMG----YRDNIWVQALSLFDEVKLMDSSTAS 713
             S ++   +L+ L  F+  ++ +   ++       RD +         +    DS    
Sbjct: 472 AKSDDERLAILDCLDKFNAPLHELMSAIVRKEEPRSRDEVAEMVEKFISDYPETDSR--K 529

Query: 714 AFYNALTDMLWHFGQKRGAQLV----VLEGKRRQVWENVWSESCLDLHLMSSGAARAMVH 769
              N L D+    G K  A  +    V  G    +  N+ S   L+L  +S  AA   + 
Sbjct: 530 PLCNCLIDICSSVGMKHAAHKIFAMGVAVGAYDGLQTNLPSLWRLNLRTLSMPAAECAIE 589

Query: 770 AWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNL 829
           AW+ ++ + V EG ELP+ L I TG G   +V     L   V  LL  +GAPF       
Sbjct: 590 AWVSSLKAAVREGDELPEDLIIETGVG---RVRSGQRLNPIVGTLLKKLGAPFTENTEPA 646

Query: 830 GRFISTGPMVASWLR 844
           G + STG  V +W++
Sbjct: 647 GYYCSTGAAVEAWIK 661



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 171/351 (48%), Gaps = 3/351 (0%)

Query: 191 DQGKLASAMISILGRLGKVDLAKNIFE--TALNEGYGNTVYAFSALISAYGRSGYCQEAI 248
           D+   A  ++++L  + + + A   FE   A  E Y    Y ++ ++         + + 
Sbjct: 104 DKSLSAKNIVTVLNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSE 163

Query: 249 SVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
            +   M    ++P+  T++ +I+ C K     +  ++ F+ M   G+ PD +T+NS++ +
Sbjct: 164 KLVEEMTGRGIQPDNYTFSTLIN-CAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDM 222

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
             R G    A  L+ ++       D  TY  + +   +        +++ EM     SPN
Sbjct: 223 YGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPN 282

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
            V  +T++   +KAG+++ A  +F+EM+  G+    V+ + ++ +Y ++G +++A  V +
Sbjct: 283 AVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYE 342

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            +++ G + D   YN+L+    + G+ ++   + ++MK    +P+ LTY T ++ Y+  G
Sbjct: 343 TLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKG 402

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +   A ++F +      K D  L++ +I A    G +E A  + DEM + G
Sbjct: 403 MVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMESG 453



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 162/336 (48%), Gaps = 16/336 (4%)

Query: 233 ALISAYGRSGYCQEAISVFNSMKRYN----------LKPNLV-----TYNAVIDACGKGG 277
           A + ++ +S   +  ++V N++ R+            +P L      TYN ++    + G
Sbjct: 98  AALESWDKSLSAKNIVTVLNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKIL-RNG 156

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              +   ++ ++M   G+QPD  TF++L+    R    E A   F  M   GI  D  TY
Sbjct: 157 RQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTY 216

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N+++D   +  +++ A E+  ++ + N   + VTY  + + YA+AG     + +  EM+ 
Sbjct: 217 NSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRD 276

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   + V  NT++   +K G+  +A  V  EM +SG+    VT + L+  Y + G YD+
Sbjct: 277 SGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQ 336

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              ++E +K +    ++  Y++L+    +GG  ++A  I +E K+AG   D + Y   ++
Sbjct: 337 AFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMN 396

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
                G+V+ A  + D++     +P+   +  +I A
Sbjct: 397 TYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRA 432



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 110/218 (50%), Gaps = 5/218 (2%)

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISP-NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           +D + K  Q     E   E   K++S  N+VT    I+ + KA    + L    E+    
Sbjct: 83  VDEVLKIVQKTGNVEAALESWDKSLSAKNIVTVLNNINRWEKALAFFEWLKARPEL---- 138

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
             ++R +YN +L I     + E +  + +EM   GI+ D  T++ L+    +  + +E  
Sbjct: 139 YEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEAL 198

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           + FE+MK++ + P+ +TY+++ID+Y + G   EA++++ + K    K D V Y A+ +  
Sbjct: 199 KWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVY 258

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            + G  +S + L+ EM   G  PN V  N+++    ++
Sbjct: 259 ARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKA 296


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 226/459 (49%), Gaps = 33/459 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L + GK++ A+N+F+  L+ G   +  A+++LI     +    +A  +F  M R  
Sbjct: 16  LIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 75

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             P+ VTYN +IDA  K G+  +   ++   M+ +G  PD +T+N+++    +    E A
Sbjct: 76  CPPSPVTYNVMIDASCKRGM-LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA 134

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             LFNEM   G   +  ++NT++  +C+ +++D A ++  EM AK+I P+  +Y  +IDG
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDG 194

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
            AKAG+L++A  +F  M   GI    V+YN V+         +EAL + K M S G R  
Sbjct: 195 LAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
             T+N L+  + K+GK DE  R+ ++M  D   P+++TYSTLI          +A  +  
Sbjct: 255 RFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +  +   K  VV  + LI  LCK G ++ A  +LD M   G  P+VVTYN+++    R+ 
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
            TE           + +E  +          D+   G   N +   +  LV+      + 
Sbjct: 375 QTE-----------RARELLS----------DMVARGLAPNVV--TYTALVSGLCKANRL 411

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSA-ILNACS 656
              C        GVF +M      PN+ T++A IL  CS
Sbjct: 412 PEAC--------GVFAQMKSSGCAPNLFTYTALILGFCS 442



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 248/519 (47%), Gaps = 46/519 (8%)

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           M   N+ P+  +Y  +ID   K G        +F  +L +GV P  + + SL+       
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAG-KLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMAN 59

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            ++ AR LF +M  RG      TYN ++DA CK   ++ A +++ +M      P+VVTY+
Sbjct: 60  SFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T++DG  K+ R+++AL +F+EM+ LG   +R S+NT++    +  + ++A  V  EME+ 
Sbjct: 120 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAK 179

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            I  D+ +Y  L+ G  K GK +E  ++F++M    ++P+ +TY+ +I          EA
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEA 239

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           +++F+  +  G +     ++ LIDA CK G ++ A  LL  MT +G  P+VVTY+++I  
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISG 299

Query: 554 FGRSATTECTVDDVE---RDLGKQK-------ESANLDAMCS----QDDKDVQEAGRTDN 599
               A     VDD      D+ K++       ++  +  +C     ++ ++V +A  +  
Sbjct: 300 LCSIA----RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355

Query: 600 QIIKV--FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
           Q   V  +  LV      G+ E R R+       +   M    + PNVVT++A+++   +
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTE-RARE-------LLSDMVARGLAPNVVTYTALVSGLCK 407

Query: 658 CNSFEDASMLLEELR-------LFDNQVYGVAHGLLMGYRDNIWVQ-ALSLFDEVKLMDS 709
            N   +A  +  +++       LF          L++G+     V   L LF E+     
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLF------TYTALILGFCSAGQVDGGLKLFGEMVCAGI 461

Query: 710 STASAFYNALTDMLWHFGQKRGAQLVVLEGK---RRQVW 745
           S     Y  L   L   G+   A  ++ EG+   R + W
Sbjct: 462 SPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAW 500



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 183/362 (50%), Gaps = 3/362 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  L      D A+ +F      G   +   ++ +I A  + G  +EA  +   M  
Sbjct: 49  TSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIE 108

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS-LLAVCSRGGLW 315
               P++VTYN V+D   K     +  + +F++M R G  P+R + N+ +L +C +  + 
Sbjct: 109 DGHVPDVVTYNTVMDGLCKSS-RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +A + +F+EM  + I  D ++Y  L+D + K  +++ A+++   M    I+P+ VTY+ +
Sbjct: 168 QACQ-VFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVV 226

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G   A  LD+AL +F  M+  G    R ++N ++  + K G+ +EA  + K M   G 
Sbjct: 227 IHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGH 286

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VTY+ L+ G     + D+ R + E M      P ++T +TLI    K G  KEA +
Sbjct: 287 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE 346

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +      +G   DVV Y+ L+   C+ G  E A  LL +M   G+ PNVVTY +++    
Sbjct: 347 VLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLC 406

Query: 556 RS 557
           ++
Sbjct: 407 KA 408



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 183/400 (45%), Gaps = 39/400 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI    + G ++ A ++ +  + +G+   V  ++ ++    +S   +EA+ +FN M+R
Sbjct: 84  NVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMER 143

Query: 257 YNLKPNLVTYNAV-----------------------------------IDACGKGGVDFK 281
               PN  ++N +                                   ID   K G    
Sbjct: 144 LGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAG-KLN 202

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
              ++F  ML +G+ P  +T+N ++         + A  LF  M  +G     FT+N L+
Sbjct: 203 EAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILI 262

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           DA CK  ++D AF ++  M      P+VVTYST+I G     R+DDA ++  +M      
Sbjct: 263 DAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCK 322

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
              V+ NT++    K GR +EA  V   M SSG   D VTYN L+ G+ + G+ +  R +
Sbjct: 323 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 382

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
              M A  ++PN++TY+ L+    K     EA  +F + K +G   ++  Y+ALI   C 
Sbjct: 383 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 442

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSA 558
            G V+  + L  EM   GI P+ V Y ++       GRSA
Sbjct: 443 AGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSA 482



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 182/375 (48%), Gaps = 40/375 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L + GK++ A  +F+  L+ G   +   ++ +I     +    EA+ +F SM+   
Sbjct: 191 LIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            +P+  T+N +IDA C +G +D      +   M  +G  PD +T+++L++        + 
Sbjct: 251 CRPSRFTFNILIDAHCKRGKLD--EAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 308

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           AR+L  +MV R     + T NTL+  +CK  ++  A E++  M +   SP+VVTY+T++ 
Sbjct: 309 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 368

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+ +AG+ + A  + S+M   G+  + V+Y  ++S   K  R  EA  V  +M+SSG   
Sbjct: 369 GHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +  TY AL+ G+   G+ D   ++F +M    +SP+ + Y TL     K G    A++I 
Sbjct: 429 NLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488

Query: 498 REFKQA----------------------------GLKADVVL---------YSALIDALC 520
           RE +++                            G   D+V           ++L+  LC
Sbjct: 489 REGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLC 548

Query: 521 KNGLVESAVSLLDEM 535
           K+G    A ++L+E+
Sbjct: 549 KSGQGGEARAVLEEI 563



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 5/202 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L + G++  A+ + +  ++ G    V  ++ L+  + R+G  + A  + + M  
Sbjct: 329 NTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA 388

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL-LAVCSRGGLW 315
             L PN+VTY A++    K          +F  M  +G  P+  T+ +L L  CS G + 
Sbjct: 389 RGLAPNVVTYTALVSGLCKAN-RLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV- 446

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE--MPAKNISPNVVTYS 373
           +    LF EMV  GI  D   Y TL   +CK  +   A EI+ E     ++ +     Y 
Sbjct: 447 DGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYR 506

Query: 374 TMIDGYAKAGRLDDALNMFSEM 395
             +DG  +AG+++ AL    +M
Sbjct: 507 FAVDGLLEAGKMEMALGFVRDM 528


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 193/362 (53%), Gaps = 2/362 (0%)

Query: 193  GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
             K    +I+ L +  K  LA  + E       G+ V+ +  +I A  + G   EA+ +F+
Sbjct: 1051 AKTYGILINGLCKARKTGLAIKLHEKMKGNCKGD-VFTYGMIIDALCKDGMTTEALDMFS 1109

Query: 253  SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
             M    + P++V Y++++D   + G   K  +E F +M   G+  D  T+NSL+   SR 
Sbjct: 1110 EMIGAGILPDVVVYSSLMDGLCRFG-RLKEALEFFKEMEGRGISADVYTYNSLIHGLSRA 1168

Query: 313  GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            GLW+      N MV RG   D FT+  L+D +CK  ++  A +I+  M  K   P+++TY
Sbjct: 1169 GLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTY 1228

Query: 373  STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
            +T+++G    G+L+DA  +F  +   GI L+  SYN +++ Y K  + +EA    +EM  
Sbjct: 1229 NTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRP 1288

Query: 433  SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             G++   VTYN L+G   + G+    +++F +M+       L TY  L+D   K G  +E
Sbjct: 1289 KGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEE 1348

Query: 493  AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            AM +F+  K+   K ++ ++S L+D +C+ G +E A    DE++K G+ P+ + YN +I+
Sbjct: 1349 AMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILIN 1408

Query: 553  AF 554
              
Sbjct: 1409 GL 1410



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 186/354 (52%), Gaps = 3/354 (0%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            +I  L + G    A ++F   +  G    V  +S+L+    R G  +EA+  F  M+   
Sbjct: 1091 IIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 1150

Query: 259  LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
            +  ++ TYN++I    + G+ +K V    + M+  G  PD  TF  L+  +C  G + EA
Sbjct: 1151 ISADVYTYNSLIHGLSRAGL-WKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 1209

Query: 318  ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
             + +   M H+G + DI TYNTL++ +C   Q++ A ++   +  + I  NV +Y+ +I+
Sbjct: 1210 -QQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 1268

Query: 378  GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            GY K  ++D+A   F EM+  G+    V+YNT++    + GR   A  +  EM++ G   
Sbjct: 1269 GYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 1328

Query: 438  DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
               TY  LL G  K G  +E   +F+ +K     PN+  +S L+D   + G  +EA + F
Sbjct: 1329 KLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQF 1388

Query: 498  REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             E  + GL+ D + Y+ LI+ LC  G++  AV LL +M ++G  P+ +T+N II
Sbjct: 1389 DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVII 1442



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 179/350 (51%), Gaps = 2/350 (0%)

Query: 212  AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
            A  +F+    +G       +  LI+   ++     AI +   MK  N K ++ TY  +ID
Sbjct: 1035 AVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCKGDVFTYGMIID 1093

Query: 272  ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            A  K G+     +++F +M+  G+ PD + ++SL+    R G  + A   F EM  RGI 
Sbjct: 1094 ALCKDGMT-TEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 1152

Query: 332  QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
             D++TYN+L+  + +          +  M  +  SP+  T++ +IDG  K G++ +A  +
Sbjct: 1153 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 1212

Query: 392  FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
               M+  G   D ++YNT+++    +G+ E+A  + + +   GI+ +  +YN L+ GY K
Sbjct: 1213 LELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 1272

Query: 452  QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
              K DE  R FE+M+   + P+ +TY+TLI    + G  + A ++F E +  G    +  
Sbjct: 1273 DQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLST 1332

Query: 512  YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            Y  L+D LCKNG +E A+ L   + K   +PN+  ++ ++D   R+   E
Sbjct: 1333 YCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLE 1382



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 178/349 (51%), Gaps = 5/349 (1%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            S+++  L R G++  A   F+     G    VY +++LI    R+G  +E     N M  
Sbjct: 1124 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 1183

Query: 257  YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
                P+  T+  +ID  C +G V      +I + M   G +PD +T+N+L+  +C  G L
Sbjct: 1184 RGFSPDAFTFTILIDGLCKEGKVG--EAQQILELMRHKGKEPDILTYNTLMNGLCLVGQL 1241

Query: 315  WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             E A  LF  +  RGI  ++F+YN L++  CK  ++D AF    EM  K + P+ VTY+T
Sbjct: 1242 -EDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNT 1300

Query: 375  MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
            +I    ++GR+  A  +F EM+  G  L   +Y  +L    K G  EEA+ + + ++ + 
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360

Query: 435  IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
             + +   ++ LL G  + GK +E  + F+++  + + P+ + Y+ LI+     G+  EA+
Sbjct: 1361 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAV 1420

Query: 495  QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            ++  + ++ G   D + ++ +I  L K   +  A+ LL+EM      P+
Sbjct: 1421 KLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 136/555 (24%), Positives = 234/555 (42%), Gaps = 100/555 (18%)

Query: 205  RLGKVDL--AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
            R G + L  A  +F+ +L          F+ L+++  + GY      ++  +    ++P+
Sbjct: 921  RFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPD 980

Query: 263  LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
            L T N +I  C                 L+ G +PD +T  +L+  V    G+ +A + L
Sbjct: 981  LYTLNILIHCCCSLRAVGCGFGVF-GGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQ-L 1038

Query: 322  FNEMVHRGI----------------------------------DQDIFTYNTLLDAICKG 347
            F+EM  +G+                                    D+FTY  ++DA+CK 
Sbjct: 1039 FDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKD 1098

Query: 348  AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
                 A ++ +EM    I P+VV YS+++DG  + GRL +AL  F EM+  GI  D  +Y
Sbjct: 1099 GMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTY 1158

Query: 408  NTVLSIYAKLGRFEEA-----LLV------------------CKE------------MES 432
            N+++   ++ G ++E      L+V                  CKE            M  
Sbjct: 1159 NSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRH 1218

Query: 433  SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             G   D +TYN L+ G    G+ ++  ++FE +    +  N+ +Y+ LI+ Y K     E
Sbjct: 1219 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDE 1278

Query: 493  AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            A + F E +  GLK   V Y+ LI ALC++G V +A  L  EM   G    + TY  ++D
Sbjct: 1279 AFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLD 1338

Query: 553  AFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQIIK-- 603
               ++   E  + D+ + + K +   N       LD MC      ++EA +  ++I K  
Sbjct: 1339 GLCKNGHLEEAM-DLFQSIKKTEHKPNIEVFSILLDGMCRAG--KLEEAWKQFDEISKNG 1395

Query: 604  ------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
                   +  L+     +G      +        +  +M +    P+ +TF+ I+    +
Sbjct: 1396 LEPDTIAYNILINGLCNKGMLSEAVK--------LLWQMEEKGCLPDSITFNVIIQNLLK 1447

Query: 658  CNSFEDASMLLEELR 672
             N   +A  LLEE+R
Sbjct: 1448 ENEIHEAIQLLEEMR 1462



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 171/362 (47%), Gaps = 8/362 (2%)

Query: 123  VVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFA 180
            VV    +  +  F R   +L +  K+ E +   AD YT+  L+  L   G W +      
Sbjct: 1121 VVYSSLMDGLCRFGRLKEAL-EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLN 1179

Query: 181  FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
              V R    +      + +I  L + GKV  A+ I E   ++G    +  ++ L++    
Sbjct: 1180 LMVDRGFSPD--AFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCL 1237

Query: 241  SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDR 299
             G  ++A  +F S+    +K N+ +YN +I+  C    +D       F++M   G++P  
Sbjct: 1238 VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKID--EAFRFFEEMRPKGLKPST 1295

Query: 300  ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
            +T+N+L+    + G    A+ LF EM   G    + TY  LLD +CK   ++ A ++   
Sbjct: 1296 VTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQS 1355

Query: 360  MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
            +      PN+  +S ++DG  +AG+L++A   F E+   G+  D ++YN +++     G 
Sbjct: 1356 IKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGM 1415

Query: 420  FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
              EA+ +  +ME  G   D++T+N ++    K+ +  E  ++ E+M+    SP+    S 
Sbjct: 1416 LSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSM 1475

Query: 480  LI 481
            L+
Sbjct: 1476 LL 1477



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 203/473 (42%), Gaps = 71/473 (15%)

Query: 269  VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
            V D C  G +     +++FD  L +   P   TFN LLA  ++ G +     ++ ++   
Sbjct: 916  VRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDV 975

Query: 329  GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            GI  D++T N L+   C    +   F +      +   P+ VT +T++ G      + DA
Sbjct: 976  GIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDA 1035

Query: 389  LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            + +F EM                                      G+  DA TY  L+ G
Sbjct: 1036 VQLFDEMT-----------------------------------KKGLLGDAKTYGILING 1060

Query: 449  YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
              K  K     ++ E+MK +C   ++ TY  +ID   K G+  EA+ +F E   AG+  D
Sbjct: 1061 LCKARKTGLAIKLHEKMKGNC-KGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPD 1119

Query: 509  VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            VV+YS+L+D LC+ G ++ A+    EM   GI  +V TYNS+I    R+           
Sbjct: 1120 VVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRA----------- 1168

Query: 569  RDLGKQKE-SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
               G  KE +  L+ M    D+       T   +I   G     K G+        Q+IL
Sbjct: 1169 ---GLWKEVTWFLNLMV---DRGFSPDAFTFTILID--GLCKEGKVGEA-------QQIL 1213

Query: 628  CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM 687
             ++      HK K +P+++T++ ++N        EDA+ L E L     ++   ++ +L+
Sbjct: 1214 ELM-----RHKGK-EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 1267

Query: 688  -GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
             GY +D    +A   F+E++      ++  YN L   L   G+ R AQ + +E
Sbjct: 1268 NGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 1320


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 151/550 (27%), Positives = 258/550 (46%), Gaps = 71/550 (12%)

Query: 192 QGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF 251
           +    S +++ + + G +  A  + E  +N G    +   ++L+  Y   G    A+++F
Sbjct: 330 EATFTSVIVACVAQ-GNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLF 388

Query: 252 NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
           N +    L PN VTY+ +I+ C   G + +   E++  M  NG+ P     NSLL    +
Sbjct: 389 NKITEDGLFPNKVTYSVLIEGCCNSG-NIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 447

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD-------------------- 351
             LWE A  LF+E V  G+  +IFTYN ++  +CKG +MD                    
Sbjct: 448 APLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVS 506

Query: 352 ---------------LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
                          +A  + ++M A+++ PNVVTYS +IDG  K G  + AL++F +M 
Sbjct: 507 YNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQML 566

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
            L I     ++NT+++   K+G+  EA    K     G     +TYN+++ G+ K+G  D
Sbjct: 567 SLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNID 626

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
               ++ +M    VSPN++TY++LI+ + K      A++   E ++ GL+ DV  YSALI
Sbjct: 627 SALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALI 686

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
           D  CK   +ESA  L  E+ + G+ PN + YNS+I  F              RDL     
Sbjct: 687 DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF--------------RDLN---- 728

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
             N++A      K + +    D   +  +  L+     +G+        ++    ++ +M
Sbjct: 729 --NMEAALVWYKKMINDRIPCD---LGTYTTLIDGLLKEGR--------LVFASDLYMEM 775

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL-RLFDNQVYGVAHGLLMGY-RDNIW 694
               I P+++TF  ++N        E+A  +LEE+ R        + + L+ GY R+   
Sbjct: 776 LSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNL 835

Query: 695 VQALSLFDEV 704
            +A +L DE+
Sbjct: 836 KEAFTLHDEM 845



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 155/667 (23%), Positives = 286/667 (42%), Gaps = 84/667 (12%)

Query: 49  SLTKPPLSPSPR-NAPKPAATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSK 107
           SLT  P  P+P+ N P+  +  ++      P +S SP P    +  P     + T  +S+
Sbjct: 46  SLTHFPEDPNPKANFPEKISPESSF-----PGNSSSPYPRYSQDTVPTSQIHQETTPLSQ 100

Query: 108 MHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELG 167
            H     I     H    + AL +   F R +   G I         G D Y  LL  L 
Sbjct: 101 NHV----IDALLCHVNDPQSALRY---FKRAETQRGFIR--------GVDAYCVLLHIL- 144

Query: 168 NRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNT 227
                          ++  E      KL +  +S       V    ++   A    +   
Sbjct: 145 ---------------MRSPETHGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELD 189

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
              F+ L++AY R+   + AI  FN+M   ++ P +   N ++ A  +  +    + +++
Sbjct: 190 HRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNM-IGELRDLY 248

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           + M+  G+  D  T + ++  C + G  E A   F E   RG+  D   Y+ ++ A+CK 
Sbjct: 249 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 308

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
              +L  E++ EM  +   P+  T++++I      G + +AL +  EM   G  ++ V  
Sbjct: 309 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 368

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
            +++  Y   G  + AL +  ++   G+  + VTY+ L+ G    G  ++   ++ QMK 
Sbjct: 369 TSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKL 428

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
           + + P++   ++L+  Y K  L++EA ++F E    G+ A++  Y+ ++  LCK G ++ 
Sbjct: 429 NGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDE 487

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT----VDDVERDL------------ 571
           A SLLD M  +G+ PNVV+YN +I    R    +       D + RDL            
Sbjct: 488 ACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILID 547

Query: 572 -----GKQKESANL-DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
                G  +++ +L D M S    ++     T N II    ++      + K +N   + 
Sbjct: 548 GNFKKGDSEKALDLFDQMLSL---NIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 604

Query: 626 IL--CI------------------LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
            +  C+                  L V+++M +  + PNVVT+++++N   + N  + A 
Sbjct: 605 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 664

Query: 666 MLLEELR 672
              +E+R
Sbjct: 665 KTRDEMR 671



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 171/352 (48%), Gaps = 7/352 (1%)

Query: 169 RGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK--NIFETALNEGYGN 226
           +G    A   F+  + R+ + N    + +  I I G   K D  K  ++F+  L+     
Sbjct: 517 KGNMDMASSVFSDMLARDLKPN----VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAP 572

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           T + F+ +I+   + G   EA     +       P+ +TYN+++D   K G +    + +
Sbjct: 573 TDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEG-NIDSALAV 631

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           + +M   GV P+ +T+ SL+    +    + A    +EM  +G++ D+  Y+ L+D  CK
Sbjct: 632 YREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCK 691

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              M+ A ++  E+    +SPN + Y++MI G+     ++ AL  + +M    I  D  +
Sbjct: 692 RRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGT 751

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T++    K GR   A  +  EM S GI  D +T++ L+ G   +G+ +  R++ E+M 
Sbjct: 752 YTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMD 811

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
              ++P++L Y+TLI  Y + G  KEA  +  E    GL  D V Y  LI+ 
Sbjct: 812 RKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 155/293 (52%), Gaps = 5/293 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L ++G++  A++  +  L EG+  +   +++++  + + G    A++V+  M  
Sbjct: 578 NTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCE 637

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
           + + PN+VTY ++I+  C    +D    ++  D+M   G++ D   +++L+   C R  +
Sbjct: 638 FGVSPNVVTYTSLINGFCKSNRIDL--ALKTRDEMREKGLELDVTAYSALIDGFCKRRDM 695

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E+A++LF E++  G+  +   YN+++        M+ A     +M    I  ++ TY+T
Sbjct: 696 -ESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTT 754

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDG  K GRL  A +++ EM   GI  D ++++ +++     G+ E A  + +EM+   
Sbjct: 755 LIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKN 814

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           +    + YN L+ GY ++G   E   + ++M    + P+ +TY  LI+   KG
Sbjct: 815 MTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKG 867



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 143/331 (43%), Gaps = 38/331 (11%)

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
           LD   +N +L+ Y +  R E A+     M    +       N LL    ++    E+R +
Sbjct: 188 LDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDL 247

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           + +M    +  +  T   ++    K G  +EA + FRE K+ G+K D   YS +I A+CK
Sbjct: 248 YNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCK 307

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
                  + LL+EM + G  P+  T+ S+I A        C         G   E+  L 
Sbjct: 308 KPNSNLGLELLEEMKERGWVPSEATFTSVIVA--------CVAQ------GNMVEALRLK 353

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
                  +++   G+  N ++     L+     QG  ++         L +F K+ +  +
Sbjct: 354 -------EEMINCGKPMNLVVAT--SLMKGYCAQGNLDSA--------LNLFNKITEDGL 396

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELRL--FDNQVYGVAHGLLMGY-RDNIWVQAL 698
            PN VT+S ++  C    + E AS L  +++L      V+ V + LL GY +  +W +A 
Sbjct: 397 FPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNV-NSLLRGYLKAPLWEEAS 455

Query: 699 SLFDEVKLMDSSTASAF-YNALTDMLWHFGQ 728
            LFDE   +D   A+ F YN +   L   G+
Sbjct: 456 KLFDEA--VDCGVANIFTYNIMMSWLCKGGK 484



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 3/189 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+I    +   ++ A+++F   L  G       ++++IS +      + A+  +  M  
Sbjct: 683 SALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIN 742

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             +  +L TY  +ID   K G       +++ +ML  G+ PD ITF+ L+  +C++G L 
Sbjct: 743 DRIPCDLGTYTTLIDGLLKEG-RLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQL- 800

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E AR +  EM  + +   +  YNTL+    +   +  AF +  EM  + + P+ VTY  +
Sbjct: 801 ENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDIL 860

Query: 376 IDGYAKAGR 384
           I+G  K  R
Sbjct: 861 INGKFKGDR 869


>gi|298707411|emb|CBJ30040.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 564

 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 245/502 (48%), Gaps = 35/502 (6%)

Query: 181 FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
             V+  +R   + KL   + S  GR G+   A      A  +G    VY +S L+SA  R
Sbjct: 23  LVVQIRQRNRRRSKLIQTLKS-QGRKGQWKEALTAANLAREDGVVFDVYTYSVLMSAVAR 81

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD--------DMLR 292
           SG  +E + + + M+   + P+   + A ++AC KGG  ++  V + D        +M  
Sbjct: 82  SGRWEEVLVLLDVMRSEGVAPDHFAFGAAVNACAKGG-QWERAVALLDQRALRLLGEMAA 140

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
            G+ P+  TF+S +A C   G WE A  L ++M   G+  + FT++  + A  K  Q   
Sbjct: 141 VGLSPNVTTFSSAVAACGNAGQWERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRP 200

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A  I+  M A N  PNV TY+  ID   KAG    A  + +EM+  G+  + +++N+ +S
Sbjct: 201 ALTILRRMRAANCPPNVQTYTAAIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSAIS 260

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
                G+++EAL + ++M S G++ +  +Y A +   G   ++     + EQM++  +  
Sbjct: 261 ALGNGGQWQEALNLLRDMPSMGVQPNMWSYTAAVTACGDNNRWARALAVHEQMRSRGIRG 320

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           + ++++  ID  ++GG ++ A+ +  E +  G+   V  +S  I A  K      AV+LL
Sbjct: 321 DEVSFTAAIDACAQGGAWEMALALLDEMRDEGIPPTVRSFSTAISACGKGQQWGRAVALL 380

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKESANLDAMCSQDDKD 590
            EM + G+ PN V++N+ IDA GR+      +  +++    G  + +   +A+ +   K 
Sbjct: 381 REMEEVGVSPNEVSFNAAIDACGRAGQWRAALSLLDKMSSAGVPRGTITYNAVIAACGK- 439

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
               G+   + + V  +++   AGQ K +                M  + +  +VV++SA
Sbjct: 440 ----GKEWARAVSVLREML---AGQAKTDG--------------DMAPVPMA-DVVSYSA 477

Query: 651 ILNACSRCNSFEDASMLLEELR 672
            ++AC R   +E+A  L+E LR
Sbjct: 478 AIDACVRAGEWEEAISLVELLR 499



 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 183/360 (50%), Gaps = 12/360 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S+ ++  G  G+ + A  + +    EG     + FSA +SA G++G  + A+++   M+ 
Sbjct: 151 SSAVAACGNAGQWERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRMRA 210

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            N  PN+ TY A IDACGK G +++    +  +M   GV P+ ITFNS ++    GG W+
Sbjct: 211 ANCPPNVQTYTAAIDACGKAG-EWRLAQGLLAEMREKGVAPNVITFNSAISALGNGGQWQ 269

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A NL  +M   G+  ++++Y   + A     +   A  +  +M ++ I  + V+++  I
Sbjct: 270 EALNLLRDMPSMGVQPNMWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAI 329

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D  A+ G  + AL +  EM+  GI     S++T +S   K  ++  A+ + +EME  G+ 
Sbjct: 330 DACAQGGAWEMALALLDEMRDEGIPPTVRSFSTAISACGKGQQWGRAVALLREMEEVGVS 389

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + V++NA +   G+ G++     + ++M +  V    +TY+ +I    KG  +  A+ +
Sbjct: 390 PNEVSFNAAIDACGRAGQWRAALSLLDKMSSAGVPRGTITYNAVIAACGKGKEWARAVSV 449

Query: 497 FREFKQAGLK----------ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            RE      K          ADVV YSA IDA  + G  E A+SL+ E+ +   R NV T
Sbjct: 450 LREMLAGQAKTDGDMAPVPMADVVSYSAAIDACVRAGEWEEAISLV-ELLRRDRRLNVGT 508


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 193/368 (52%), Gaps = 16/368 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI      GK   A+ +    +       V  FSALI+A+ + G    A  ++  M R
Sbjct: 119 NCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLR 178

Query: 257 YNLKPNLVTYNAVIDACGKGG--VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG-- 312
            N+ P  +TY+++ID   K     D KH   +FD M+  G  PD IT N+L+  C R   
Sbjct: 179 RNIFPTTITYSSMIDGFCKHSRLEDAKH---MFDLMVSKGCSPDIITLNTLIDGCCRAKR 235

Query: 313 ---------GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
                    G    A++LF EM+  G+  DI T NTLL  +C+  +++ A E+       
Sbjct: 236 HLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKS 295

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
            +  +  T + +I+G  K  ++D+A ++F+ +   G+  D V+YN ++ ++ K G F  A
Sbjct: 296 KMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRA 355

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
             +  EM   GI    VTYN+++ G+ KQ + +E R+M + M ++  SP+++T+STLI  
Sbjct: 356 EDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKG 415

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y K G   + +++F E  Q GL AD + Y+ALI   CK G +  A  + +EM   G+ P+
Sbjct: 416 YCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPD 475

Query: 544 VVTYNSII 551
            +T+ S++
Sbjct: 476 TITFRSML 483



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 239/506 (47%), Gaps = 46/506 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +++ L R G+V  A  + +  + EG+      +  +++   + G    A+++   M  
Sbjct: 14  TTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDE 73

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             +K N+V Y+A++D   K G   K    IF +M   G+ P+ +T+N ++   CS G  W
Sbjct: 74  SQIKANVVIYSAIVDRLCKDGNHIK-AQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGK-W 131

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  L  +M+ R ID D+ T++ L++A  K  ++  A E+  EM  +NI P  +TYS+M
Sbjct: 132 SDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSM 191

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS-----------IYAKLGRFEEAL 424
           IDG+ K  RL+DA +MF  M   G   D ++ NT++             + ++G    A 
Sbjct: 192 IDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQ 251

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            + +EM S+G+  D VT N LL G  + GK ++   MF+  +   +  +  T + +I+  
Sbjct: 252 DLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGM 311

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            KG    EA  +F      G++ DVV Y+ LI    K G    A  +  EM  +GI P+ 
Sbjct: 312 CKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPST 371

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD-------DKDVQEAGRT 597
           VTYNS++D F       C  + +E    +Q   + +   CS D        K   +AGR 
Sbjct: 372 VTYNSMVDGF-------CKQNRLEE--ARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRV 422

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEIL----CILG-------VFQKMHKLKIKPNVV 646
           D+ +     +L +E   +G   +      L    C +G       +F++M    + P+ +
Sbjct: 423 DDGL-----ELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTI 477

Query: 647 TFSAILNACSRCNSFEDASMLLEELR 672
           TF ++L         +    +LE+L+
Sbjct: 478 TFRSMLAGLCTKAELQKGLTMLEDLQ 503



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 191/390 (48%), Gaps = 14/390 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           Y  ++    + G+WS A Q     +   ER  D   +  SA+I+   + GKV  A+ ++ 
Sbjct: 118 YNCMIDGYCSYGKWSDAEQLLRDMI---ERNIDPDVVTFSALINAFVKEGKVSGAEELYR 174

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
             L      T   +S++I  + +    ++A  +F+ M      P+++T N +ID C +  
Sbjct: 175 EMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAK 234

Query: 278 VDFKH----------VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
               H            ++F +M+ NGV PD +T N+LLA     G  E A  +F     
Sbjct: 235 RHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQK 294

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
             +D D  T N +++ +CKG ++D A+++   +P   +  +VVTY+ +I  + K G    
Sbjct: 295 SKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLR 354

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A +++ EM   GI    V+YN+++  + K  R EEA  +   M S G   D VT++ L+ 
Sbjct: 355 AEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIK 414

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           GY K G+ D+   +F +M    +  + +TY+ LI  + K G    A  IF E   +G+  
Sbjct: 415 GYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCP 474

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           D + + +++  LC    ++  +++L+++ K
Sbjct: 475 DTITFRSMLAGLCTKAELQKGLTMLEDLQK 504



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 124/495 (25%), Positives = 220/495 (44%), Gaps = 65/495 (13%)

Query: 262 NLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           N+VT+  +++  C +G V     + + D M+  G QPD +T+ +++    + G   +A N
Sbjct: 9   NVVTFTTLMNGLCREGRV--LQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALN 66

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           +  +M    I  ++  Y+ ++D +CK      A  I  EM  K I PNV+TY+ MIDGY 
Sbjct: 67  MLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYC 126

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
             G+  DA  +  +M    I  D V+++ +++ + K G+   A  + +EM    I    +
Sbjct: 127 SYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTI 186

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID-----------VYSKGGL 489
           TY++++ G+ K  + ++ + MF+ M +   SP+++T +TLID            + + G 
Sbjct: 187 TYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGN 246

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
              A  +F+E    G+  D+V  + L+  LC+NG +E A+ +     K  +  +  T N 
Sbjct: 247 VNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNI 306

Query: 550 IIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
           II+   +               G + + A  D   S     V+    T N +I VF    
Sbjct: 307 IINGMCK---------------GNKVDEA-WDLFNSLPVNGVETDVVTYNILIGVF---- 346

Query: 610 AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
                  K+ N  R E      ++ +M    I P+ VT++++++   + N  E+A  +++
Sbjct: 347 ------VKEGNFLRAE-----DIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVD 395

Query: 670 ELRLFDNQVYGVAHG----------LLMGYRDNIWV-QALSLFDEVKLMDSSTASAFYNA 718
            +         V+ G          L+ GY     V   L LF E+        +  YNA
Sbjct: 396 SM---------VSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNA 446

Query: 719 LTDMLWHFGQKRGAQ 733
           L       G   GAQ
Sbjct: 447 LIHGFCKVGDLNGAQ 461



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 202/437 (46%), Gaps = 43/437 (9%)

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           MV  G   ++ T+ TL++ +C+  ++  A  ++  M  +   P+ VTY T+++G  K G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
              ALNM  +M    I  + V Y+ ++    K G   +A  +  EM   GI  + +TYN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++ GY   GK+ +  ++   M    + P+++T+S LI+ + K G    A +++RE  +  
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT----T 560
           +    + YS++ID  CK+  +E A  + D M  +G  P+++T N++ID   R+       
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 561 ECTVDDVE--RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
            C V +V   +DL ++  S  +    S D              I     L+A     GK 
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGV----SPD--------------IVTCNTLLAGLCENGKL 282

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
           E          L +F+   K K+  +  T + I+N   + N  ++A  L   L +   + 
Sbjct: 283 EKA--------LEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVET 334

Query: 679 YGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVV 736
             V + +L+G   ++  +++A  ++ E+       ++  YN++ D      Q R      
Sbjct: 335 DVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCK--QNR------ 386

Query: 737 LEGKRRQVWENVWSESC 753
           LE + RQ+ +++ SE C
Sbjct: 387 LE-EARQMVDSMVSEGC 402



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 122/238 (51%), Gaps = 1/238 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +++ L   GK++ A  +F+              + +I+   +     EA  +FNS+ 
Sbjct: 269 CNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLP 328

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              ++ ++VTYN +I    K G +F    +I+ +ML  G+ P  +T+NS++    +    
Sbjct: 329 VNGVETDVVTYNILIGVFVKEG-NFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRL 387

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E AR + + MV  G   D+ T++TL+   CK  ++D   E+ +EM  + +  + +TY+ +
Sbjct: 388 EEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNAL 447

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           I G+ K G L+ A ++F EM   G+  D +++ ++L+        ++ L + ++++ S
Sbjct: 448 IHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 147/552 (26%), Positives = 258/552 (46%), Gaps = 52/552 (9%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           LL  L +RG    A+   A A  RE R     +  + ++  L R    +LA  +FE    
Sbjct: 134 LLSLLADRGLLDDAV--LALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFE---- 187

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           +     V+ F+ +I    + G   EA ++   MK     P++VTYN++ID  GK G + +
Sbjct: 188 QLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCG-ELE 246

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            V ++  +M   G +PD +T+N+L+    + G  E A + F EM   G+  ++ T++T +
Sbjct: 247 EVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFV 306

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           DA CK   +  A ++ A+M  K + PN VTY+ ++DG  KAGRLDDAL + +EM   G+ 
Sbjct: 307 DAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVP 366

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK------------------------ 437
           L+ V+Y  ++    K G+  EA  V + ME +GIR                         
Sbjct: 367 LNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSL 426

Query: 438 -----------DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
                      D   Y AL+ G     K DE + +  +M    + PN + Y+ ++D   K
Sbjct: 427 LSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFK 486

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
                EA+ + ++   +G + ++V Y AL+D LCK G ++ A+S  ++M   G+ PNV  
Sbjct: 487 ARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQA 546

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG 606
           Y +++D   ++   +  V  ++  + K     N+    S  D  +++    D   +K   
Sbjct: 547 YTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNV-VCTSLMDGHLKQGNLQDAFALK--A 603

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKL-------KIKPNVVTFSAILNACSRCN 659
           +++            C     C L + Q+  ++        I P+ V ++ ++N C +  
Sbjct: 604 KMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLG 663

Query: 660 SFEDASMLLEEL 671
           + E+A++L  E+
Sbjct: 664 NMEEAAILQNEM 675



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 151/310 (48%), Gaps = 5/310 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L   G+ ++A   F    +   R N+   L + +I         + A ++   
Sbjct: 372 YTVLVDGLCKEGKVAEAEDVFRLMERAGIRANEL--LYTTLIHGHFVYKNSERALSLLSE 429

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             ++G    V  + ALI          EA S+ N M    LKPN V Y  ++DAC K   
Sbjct: 430 MKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARK 489

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +    + +   M+ +G +P+ +T+ +L+  +C  G + EA  + FN+MV  G++ ++  Y
Sbjct: 490 E-SEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISH-FNKMVDLGLEPNVQAY 547

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             L+D +CK  ++D A  ++ EM  K +S + V  ++++DG+ K G L DA  + ++M  
Sbjct: 548 TALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMIN 607

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+ LD   Y   +  +  L   +EA  V  EM  +GI  DAV YN L+    K G  +E
Sbjct: 608 SGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEE 667

Query: 458 VRRMFEQMKA 467
              +  +M++
Sbjct: 668 AAILQNEMES 677



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 145/306 (47%), Gaps = 3/306 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++  L + GKV  A+++F      G       ++ LI  +      + A+S+ + MK 
Sbjct: 373 TVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKD 432

Query: 257 YNLKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             ++ ++  Y A+I   C    +D      + + M   G++P+ + + +++  C +    
Sbjct: 433 KGMELDVSLYGALIWGLCNLQKLD--EAKSLLNKMDECGLKPNNVIYTNIMDACFKARKE 490

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  L  +M+  G   +I TY  L+D +CK   +D A     +M    + PNV  Y+ +
Sbjct: 491 SEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTAL 550

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +DG  K GRLD A+ +  EM   G+ LD V   +++  + K G  ++A  +  +M +SG+
Sbjct: 551 VDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGL 610

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D   Y   + G+       E R +  +M  + ++P+ + Y+ LI+   K G  +EA  
Sbjct: 611 QLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAI 670

Query: 496 IFREFK 501
           +  E +
Sbjct: 671 LQNEME 676



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 141/319 (44%), Gaps = 53/319 (16%)

Query: 408 NTVLSIYAKLGRFEEA---------------------LLVCKEMESSG----------IR 436
           +T+LS+ A  G  ++A                     +L+C   E S             
Sbjct: 132 DTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA 191

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +  T+N ++    K+G   E R +  +MKA   SP+++TY++LID Y K G  +E  ++
Sbjct: 192 PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             E +  G + DVV Y+AL++  CK G +E A S   EM +EG+  NVVT+++ +DAF +
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCK 311

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
           +      +    +   K  +   +   C  D     +AGR D+ ++     L  E   QG
Sbjct: 312 NGMVREAMKLFAQMRMKGMKPNEVTYTCLVD--GTCKAGRLDDALV-----LTNEMVQQG 364

Query: 617 KKENRCRQEI----LCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
              N     +    LC  G       VF+ M +  I+ N + ++ +++      + E A 
Sbjct: 365 VPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERAL 424

Query: 666 MLLEELR----LFDNQVYG 680
            LL E++      D  +YG
Sbjct: 425 SLLSEMKDKGMELDVSLYG 443



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 93/184 (50%), Gaps = 1/184 (0%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           + +  ++ G+   +  + AL+    ++G   EAIS FN M    L+PN+  Y A++D   
Sbjct: 496 LLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLC 555

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K G      V + D+M+  G+  D +   SL+    + G  + A  L  +M++ G+  D+
Sbjct: 556 KNG-RLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDL 614

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
           + Y   +   C    +  A E+++EM    I+P+ V Y+ +I+   K G +++A  + +E
Sbjct: 615 YGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNE 674

Query: 395 MKFL 398
           M+ L
Sbjct: 675 MESL 678


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 250/529 (47%), Gaps = 34/529 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S   S + R  + +L  +  +     G  + +Y  + +I+ + R      A SV   + +
Sbjct: 92  SRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMK 151

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +P+  T+N +I      G      V + D M+ NG QPD +T+NS++    R G   
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEG-KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +L  +M  R +  D+FTY+T++D++C+   +D A  +  EM  K I  +VVTY++++
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G  KAG+ +D   +  +M    I  + +++N +L ++ K G+ +EA  + KEM + GI 
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + +TYN L+ GY  Q +  E   M + M  +  SP+++T+++LI  Y       + M++
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           FR   + GL A+ V YS L+   C++G ++ A  L  EM   G+ P+V+TY  ++D    
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
           +   E  ++  E DL K K                          I ++  ++      G
Sbjct: 451 NGKLEKALEIFE-DLQKSKMDLG----------------------IVMYTTIIEGMCKGG 487

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
           K E+           +F  +    +KPNV+T++ +++   +  S  +A++LL ++    N
Sbjct: 488 KVEDA--------WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539

Query: 677 QVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
                 +  L+    RD     +  L +E+K    S  ++    + DML
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 191/400 (47%), Gaps = 12/400 (3%)

Query: 139 DVSLG-DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL 195
           D SL  D+L+K E +   AD +T+  ++  L   G    AI  F    K  E K  +  +
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF----KEMETKGIKSSV 263

Query: 196 AS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
            +  +++  L + GK +    + +  ++      V  F+ L+  + + G  QEA  ++  
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M    + PN++TYN ++D  C +          + D M+RN   PD +TF SL+      
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQN--RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              +    +F  +  RG+  +  TY+ L+   C+  ++ LA E+  EM +  + P+V+TY
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
             ++DG    G+L+ AL +F +++   + L  V Y T++    K G+ E+A  +   +  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G++ + +TY  ++ G  K+G   E   +  +M+ D  +PN  TY+TLI  + + G    
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           + ++  E K  G  AD      +ID L    L +S + +L
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDML 601



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/469 (21%), Positives = 210/469 (44%), Gaps = 51/469 (10%)

Query: 276 GGVDFKH--VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G VD K    + +F +M+R+   P  + F+   +  +R   +    +   ++   GI  +
Sbjct: 63  GIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHN 122

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           I+T N +++  C+  +   A+ ++ ++      P+  T++T+I G    G++ +A+ +  
Sbjct: 123 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVD 182

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M   G   D V+YN++++   + G    AL + ++ME   ++ D  TY+ ++    + G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
             D    +F++M+   +  +++TY++L+    K G + +   + ++     +  +V+ ++
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            L+D   K G ++ A  L  EM   GI PN++TYN+++D +                  +
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ--------------NR 348

Query: 574 QKESAN-LDAM----CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
             E+ N LD M    CS D         T   +IK  G  + ++   G K          
Sbjct: 349 LSEANNMLDLMVRNKCSPDIV-------TFTSLIK--GYCMVKRVDDGMK---------- 389

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVYGVAHG 684
              VF+ + K  +  N VT+S ++    +    + A  L +E+     L D   YG+   
Sbjct: 390 ---VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI--- 443

Query: 685 LLMGYRDNIWVQ-ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
           LL G  DN  ++ AL +F++++          Y  + + +   G+   A
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 211/397 (53%), Gaps = 13/397 (3%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASA-----MISILGRLGKVDLAKNIFETALNEGY 224
           GE   A++ F       +R  D G   SA     M+  L + G++ + +++++  +    
Sbjct: 173 GEMDLALEGF-------DRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRI 225

Query: 225 GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVV 284
           G  V  F  +I+   + G  Q+A  V   MK +   P+++TYN +ID   K G  FK   
Sbjct: 226 GVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK-AD 284

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
            +  +M+   + P+ ITFN L+    R     AA+ +F EM  +G+  ++ TYN+L++ +
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C   ++D A  +  +M    + PNVVTY+ +I+G+ K   L +A  M  ++   G+  + 
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           +++NT++  Y K GR ++A L+   M  +G+  +  TYN L+ G+ ++G   E R++ ++
Sbjct: 405 ITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKE 464

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M+ + +  +L+TY+ L+D   K G  ++A+++  E  + GL    + Y+ALID   + G 
Sbjct: 465 MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGN 524

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             +A+++   M K+G R N+VTYN +I  F      E
Sbjct: 525 STAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLE 561



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 220/404 (54%), Gaps = 11/404 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++DLA   F+ A + G+  +  + + ++ +  + G      SV+  M R  +  N+VT+
Sbjct: 173 GEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTF 232

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           + VI+   K G  F+   ++ +DM   G  P  IT+N+++    + G    A  L  EMV
Sbjct: 233 DVVINGLCKVG-KFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            + I  +  T+N L+D  C+   +  A ++  EM  + + PNVVTY+++I+G    G+LD
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +AL +  +M  +G+  + V+YN +++ + K    +EA  +  ++   G+  + +T+N L+
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
             YGK G+ D+   +   M    V PN+ TY+ LI  + + G  KEA ++ +E +  GLK
Sbjct: 412 DAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLK 471

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
           AD+V Y+ L+DALCK G    AV LLDEM + G+ P+ +TYN++ID + R   +   + +
Sbjct: 472 ADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL-N 530

Query: 567 VERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQIIK 603
           V   + K+   AN       +   C++    ++EA R  N++++
Sbjct: 531 VRTLMEKKGRRANIVTYNVLIKGFCNKG--KLEEANRLLNEMLE 572



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 212/438 (48%), Gaps = 32/438 (7%)

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN 293
           L+ AY ++G    A+  F+    Y  + + ++ N ++ +  K G     V  ++ +M+R 
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEG-RIGVVESVYKEMIRR 223

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
            +  + +TF+ ++    + G ++ A ++  +M   G    + TYNT++D  CK  +M  A
Sbjct: 224 RIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKA 283

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             ++ EM AK I PN +T++ +IDG+ +   +  A  +F EM+  G+  + V+YN++++ 
Sbjct: 284 DALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLING 343

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
               G+ +EAL +  +M   G++ + VTYNAL+ G+ K+    E R M + +    ++PN
Sbjct: 344 LCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPN 403

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           ++T++TLID Y K G   +A  +       G+  +V  Y+ LI   C+ G V+ A  L  
Sbjct: 404 VITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK 463

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
           EM   G++ ++VTYN ++DA  +   T             +K    LD M         E
Sbjct: 464 EMEGNGLKADLVTYNILVDALCKKGET-------------RKAVRLLDEMF--------E 502

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
            G   + +   +  L+     +G             L V   M K   + N+VT++ ++ 
Sbjct: 503 VGLNPSHL--TYNALIDGYFREGNST--------AALNVRTLMEKKGRRANIVTYNVLIK 552

Query: 654 ACSRCNSFEDASMLLEEL 671
                   E+A+ LL E+
Sbjct: 553 GFCNKGKLEEANRLLNEM 570



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 157/297 (52%), Gaps = 3/297 (1%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
            F+ LI  + R      A  VF  M+R  L+PN+VTYN++I+  C  G +D    + + D
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD--EALGLQD 358

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M   G++P+ +T+N+L+    +  + + AR + +++  RG+  ++ T+NTL+DA  K  
Sbjct: 359 KMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAG 418

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +MD AF + + M    + PNV TY+ +I G+ + G + +A  +  EM+  G+  D V+YN
Sbjct: 419 RMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYN 478

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            ++    K G   +A+ +  EM   G+    +TYNAL+ GY ++G       +   M+  
Sbjct: 479 ILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKK 538

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
               N++TY+ LI  +   G  +EA ++  E  + GL  +   Y  L D + + G +
Sbjct: 539 GRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 595



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 155/297 (52%), Gaps = 17/297 (5%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG---------LWEAARNLFNEMVHRG 329
           ++  +  + D   +N    +   F+SL  + S G          +W   +N   ++   G
Sbjct: 122 NYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEG 181

Query: 330 IDQ--------DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            D+           + N +L ++ K  ++ +   +  EM  + I  NVVT+  +I+G  K
Sbjct: 182 FDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCK 241

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G+   A ++  +MK  G     ++YNT++  Y K G+  +A  + KEM +  I  + +T
Sbjct: 242 VGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEIT 301

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           +N L+ G+ +       +++FE+M+   + PN++TY++LI+     G   EA+ +  +  
Sbjct: 302 FNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS 361

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
             GLK +VV Y+ALI+  CK  +++ A  +LD++ K G+ PNV+T+N++IDA+G++ 
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAG 418



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 172/370 (46%), Gaps = 39/370 (10%)

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           N +    ++  Y K G +D AL  F      G  L  +S N +L    K GR      V 
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           KEM    I  + VT++ ++ G  K GK+ +   + E MKA   SP+++TY+T+ID Y K 
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G   +A  + +E     +  + + ++ LID  C++  V +A  + +EM ++G++PNVVTY
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 548 NSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
           NS+I+         C+   ++  LG Q + + +          ++    T N +I  F +
Sbjct: 338 NSLINGL-------CSNGKLDEALGLQDKMSGMG---------LKPNVVTYNALINGFCK 381

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA--- 664
                    KK  +  +E+L  +G      K  + PNV+TF+ +++A  +    +DA   
Sbjct: 382 ---------KKMLKEAREMLDDIG------KRGLAPNVITFNTLIDAYGKAGRMDDAFLL 426

Query: 665 -SMLLEELRLFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDM 722
            SM+L+     +   Y     L++G+ R+    +A  L  E++          YN L D 
Sbjct: 427 RSMMLDTGVCPNVSTYNC---LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDA 483

Query: 723 LWHFGQKRGA 732
           L   G+ R A
Sbjct: 484 LCKKGETRKA 493



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 3/192 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I   G+ G++D A  +    L+ G    V  ++ LI  + R G  +EA  +   M+ 
Sbjct: 408 NTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             LK +LVTYN ++DA C KG  + +  V + D+M   G+ P  +T+N+L+    R G  
Sbjct: 468 NGLKADLVTYNILVDALCKKG--ETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNS 525

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            AA N+   M  +G   +I TYN L+   C   +++ A  ++ EM  K + PN  TY  +
Sbjct: 526 TAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 585

Query: 376 IDGYAKAGRLDD 387
            D   + G + D
Sbjct: 586 RDEMMEKGFIPD 597



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 34/299 (11%)

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGI--GLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           ++D +AK     ++  +F  +  LG     + +  + ++  Y K G  + AL        
Sbjct: 129 LLDSFAKNAHYSNS-TIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGD 187

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G R  A++ N +L    K+G+   V  ++++M    +  N++T+  +I+   K G +++
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQK 247

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A  +  + K  G    V+ Y+ +ID  CK G +  A +LL EM  + I PN +T+N +ID
Sbjct: 248 AGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILID 307

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
            F R           E                     ++Q  G   N +   +  L+   
Sbjct: 308 GFCRDENVTAAKKVFE---------------------EMQRQGLQPNVV--TYNSLINGL 344

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              GK +          LG+  KM  + +KPNVVT++A++N   +    ++A  +L+++
Sbjct: 345 CSNGKLDE--------ALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDI 395


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 161/618 (26%), Positives = 285/618 (46%), Gaps = 52/618 (8%)

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA- 272
           ++F+   + G    +   + L++ +    +   A SV  ++ +    PN +T N +I   
Sbjct: 84  SLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGL 143

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C +G  + K  +   D ++  G Q +++++ +L+    + G  +A   L  ++    +  
Sbjct: 144 CFRG--EIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKP 201

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D+  YNT++ ++CK   +  A ++ +EM  K ISPNVVTY+ ++ G+   G L +A ++ 
Sbjct: 202 DVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLL 261

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           +EMK   I  D  ++NT++    K G+ + A +V   M  + I+ D VTYN+L+ GY   
Sbjct: 262 NEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFL 321

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
            K    + +F  M    V+PN+ TY+T+ID   K  +  EAM +F E K   +  D+V Y
Sbjct: 322 NKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTY 381

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG 572
           ++LID LCKN  +E A++L  +M ++GI+P+V +Y  ++DA  +    E   +  +R L 
Sbjct: 382 TSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLV 441

Query: 573 K------QKESANLDAMCSQD------DKDVQEAGR---TDNQIIKVFGQLVAEKAGQGK 617
           K      Q  +  ++ +C  D      D   +  G+    D    K     + EK    K
Sbjct: 442 KGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDK 501

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN-----SFEDASMLLEELR 672
            E   R+ I   L   Q+  K+++K   +  + +  AC + +     +  D   L+ EL+
Sbjct: 502 AEKILREMIARGL---QEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELK 558

Query: 673 LFDNQVYGVAHGLLMGYRDNIWV---------------QALSLFDEVKLMDSSTASAFYN 717
                 Y +A    MG   N+                 +A+SLF+E+K  +       Y 
Sbjct: 559 HAKYVFYSMAQ---MGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYT 615

Query: 718 ALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGA--------ARAMVH 769
           +L D L        A  ++ E K   +  +V+S + L   L  SG          R +V 
Sbjct: 616 SLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVK 675

Query: 770 AWLLNIHSIVFEGHELPK 787
            + LN+       +EL K
Sbjct: 676 GYHLNVQVYTAMINELCK 693



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 247/531 (46%), Gaps = 81/531 (15%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A +++   + +G    V  ++AL+  +   G+ +EA S+ N MK  N+ P++ T+N +ID
Sbjct: 222 ACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLID 281

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           A GK G   K    +   M++  ++PD +T+NSL+         + A+ +F  M   G+ 
Sbjct: 282 ALGKEG-KMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVT 340

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            ++ TY T++D +CK   +D A  +  EM  KN+ P++VTY+++IDG  K   L+ A+ +
Sbjct: 341 PNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIAL 400

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA------LLV-----------------CK 428
             +MK  GI  D  SY  +L    K GR E A      LLV                 CK
Sbjct: 401 CKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCK 460

Query: 429 ------------EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD-------- 468
                       +ME  G   DA+T+  ++    ++ + D+  ++  +M A         
Sbjct: 461 ADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKV 520

Query: 469 ---------------CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
                          C+ P+++TY TL+D Y      K A  +F    Q G+  +V  Y+
Sbjct: 521 RLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYT 580

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDL 571
            +ID LCK   V+ A+SL +EM  + + PN+VTY S+IDA  ++   E  +  ++  ++ 
Sbjct: 581 IMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEH 640

Query: 572 GKQKESAN----LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
           G Q +  +    LD +C        ++GR +    ++F +L+ +      +        L
Sbjct: 641 GIQPDVYSYTILLDGLC--------KSGRLEGA-KEIFQRLLVKGYHLNVQVYTAMINEL 691

Query: 628 CILGVFQKMHKLKIK-------PNVVTFSAILNACSRCNSFEDASMLLEEL 671
           C  G+F +   L+ K       P+ VTF  I+ A    +  + A  +L E+
Sbjct: 692 CKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEM 742



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 211/462 (45%), Gaps = 67/462 (14%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  LG+ GK+  AK +    +       V  +++LI  Y      + A  VF SM +
Sbjct: 277 NTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQ 336

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + PN+ TY  +ID  C +  VD    + +F++M    + PD +T+ SL+    +    
Sbjct: 337 SGVTPNVRTYTTMIDGLCKEKMVD--EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHL 394

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  L  +M  +GI  D+++Y  LLDA+CKG +++ A E    +  K    NV TY+ M
Sbjct: 395 ERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVM 454

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY--------------------- 414
           I+G  KA    +A+++ S+M+  G   D +++ T++                        
Sbjct: 455 INGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGL 514

Query: 415 --AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG-----KQGKY------------ 455
             A+  R +EA +V   M  + I+ D VTY  L+ GY      K  KY            
Sbjct: 515 QEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTP 574

Query: 456 ------------------DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
                             DE   +FE+MK   + PN++TY++LID   K    + A+ + 
Sbjct: 575 NVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALL 634

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           +E K+ G++ DV  Y+ L+D LCK+G +E A  +   +  +G   NV  Y ++I+   ++
Sbjct: 635 KEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKA 694

Query: 558 ATTECTVDDVER--DLGKQKESANLD----AMCSQDDKDVQE 593
              +  +D   +  D G   ++   D    A+  +D+ D  E
Sbjct: 695 GLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAE 736



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 182/398 (45%), Gaps = 22/398 (5%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           FD ML     P    FN +L+       +    +LF +    G   D+ T N L++  C 
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +  AF ++A +  +   PN +T +T+I G    G +  AL    ++   G  L++VS
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T+++   K G  +    + +++E   ++ D V YN ++    K     +   ++ +M 
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              +SPN++TY+ L+  +   G  KEA  +  E K   +  DV  ++ LIDAL K G ++
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN------- 579
           +A  +L  M K  I+P+VVTYNS+ID +      +     V   + +   + N       
Sbjct: 291 AAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVK-NAKYVFYSMAQSGVTPNVRTYTTM 349

Query: 580 LDAMCSQDDKD----VQEAGRTDNQI--IKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
           +D +C +   D    + E  +  N I  I  +  L+    G  K  +  R   LC     
Sbjct: 350 IDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLI---DGLCKNHHLERAIALC----- 401

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +KM +  I+P+V +++ +L+A  +    E+A    + L
Sbjct: 402 KKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRL 439



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 160/344 (46%), Gaps = 28/344 (8%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSM--KRYNLKPNLVTYNAVIDACGKGGVD 279
           +G    VY+++ L+ A  + G  + A   F  +  K Y+L  N+ TYN +I+   K  + 
Sbjct: 407 QGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHL--NVQTYNVMINGLCKADL- 463

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ------- 332
           F   +++   M   G  PD ITF +++         + A  +  EM+ RG+ +       
Sbjct: 464 FGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLK 523

Query: 333 ----------------DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
                           D+ TY TL+D      ++  A  +   M    ++PNV  Y+ MI
Sbjct: 524 EAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMI 583

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  K   +D+A+++F EMK   +  + V+Y +++    K    E A+ + KEM+  GI+
Sbjct: 584 DGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQ 643

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  +Y  LL G  K G+ +  + +F+++       N+  Y+ +I+   K GL+ EA+ +
Sbjct: 644 PDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDL 703

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
             + +  G   D V +  +I AL +    + A  +L EM   G+
Sbjct: 704 QXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 136/300 (45%), Gaps = 23/300 (7%)

Query: 144 DILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQG-KLASAMISI 202
           D+  K E K C  D  TF            K I C  F    E+ +ND+  K+   MI+ 
Sbjct: 469 DLKSKMEGKGCMPDAITF------------KTIICALF----EKDENDKAEKILREMIAR 512

Query: 203 -LGRLGKVDL--AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
            L    KV L  AK +            V  +  L+  Y      + A  VF SM +  +
Sbjct: 513 GLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGV 572

Query: 260 KPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            PN+  Y  +ID  C K  VD    + +F++M    + P+ +T+ SL+    +    E A
Sbjct: 573 TPNVQCYTIMIDGLCKKKTVD--EAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERA 630

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L  EM   GI  D+++Y  LLD +CK  +++ A EI   +  K    NV  Y+ MI+ 
Sbjct: 631 IALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINE 690

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             KAG  D+AL++  +M+  G   D V+++ ++    +    ++A  +  EM + G+ K+
Sbjct: 691 LCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 234/473 (49%), Gaps = 32/473 (6%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           M++ L +  K+D  K        +G    +  ++ LI+AY R G   EA  V NSM    
Sbjct: 191 MVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKG 250

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           LKP L TYNAVI+   K G  +     +F++ML  G+ PD  T+N+LL    R   +  A
Sbjct: 251 LKPTLFTYNAVINGLCKKG-RYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEA 309

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           +++F++M+HRG+  D+ ++++L+    +   +D A     +M    + P+ V Y+ +I+G
Sbjct: 310 KDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILING 369

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y + G + +AL +  +M   G  LD V+YNT+L+   K     +A  +  EM   G+  D
Sbjct: 370 YCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPD 429

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
             T+  L+ G+ K+G   +   +F  M    + P+++TY+ LID + K    ++A +++ 
Sbjct: 430 FCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWN 489

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E     +  + + Y+ L++  C  G V  A  L DEM ++GI+P +VT N++I  + RS 
Sbjct: 490 EMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSG 549

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
                      DL K  E   L  M S+    V     T N +I  F         +G+ 
Sbjct: 550 -----------DLSKADEF--LGKMISE---GVGPDSITYNTLINGF--------VKGEY 585

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            ++          +  KM    ++P+VVT++ ILN   R    ++A ++L ++
Sbjct: 586 MDKA-------FFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKM 631



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 183/343 (53%), Gaps = 1/343 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           AK+IF   L+ G    + +FS+LI    R+G+  +A+  F  MK   L P+ V Y  +I+
Sbjct: 309 AKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILIN 368

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              + G+     +EI D ML  G   D + +N++L    +  L   A  LF+EMV RG+ 
Sbjct: 369 GYCRNGM-MSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVV 427

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  T+ TL+   CK   M  A  +   M  KNI P++VTY+ +IDG+ K   ++ A  +
Sbjct: 428 PDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANEL 487

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           ++EM    I  + +SY  +++ Y  LG   EA  +  EM   GI+   VT N ++ GY +
Sbjct: 488 WNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCR 547

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G   +      +M ++ V P+ +TY+TLI+ + KG    +A  +  + +  GL+ DVV 
Sbjct: 548 SGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVT 607

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           Y+ +++  C+ G ++ A  +L +M + GI P+  TY ++I+ +
Sbjct: 608 YNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGY 650



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 133/499 (26%), Positives = 241/499 (48%), Gaps = 51/499 (10%)

Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
           R +R +D   L   MI   G + +V++ +++   +   G  N V  F  LI +Y ++   
Sbjct: 75  RSKRLSDAQTLILRMIRRSG-VSRVEIVESLISMSSTCGVDNLV--FDLLIRSYVQARKL 131

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACG----KGGVDFKHVVEIFDDMLRNGVQPDRI 300
            E    F  ++R   K  LV+ NA     G     G VD     E+++++ R+G++ +  
Sbjct: 132 NEGTDTFKILRR---KGFLVSINACNSLLGGLVKMGWVDLAW--EVYNEIARSGIELNVY 186

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           T N ++    +    +  +    +M  +GI  DI TYNTL++A C+   +  AFE+M  M
Sbjct: 187 TLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSM 246

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
             K + P + TY+ +I+G  K GR   A  +F+EM  +G+  D  +YNT+L    +   F
Sbjct: 247 SGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNF 306

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
            EA  +  +M   G+  D +++++L+G   + G  D+    F  MK   + P+ + Y+ L
Sbjct: 307 LEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTIL 366

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I+ Y + G+  EA++I  +  + G   DVV Y+ +++ LCK  L+  A +L DEM + G+
Sbjct: 367 INGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGV 426

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
            P+  T+ ++I    +           E ++GK   + +L  + +Q  K+++    T N 
Sbjct: 427 VPDFCTFTTLIHGHCK-----------EGNMGK---ALSLFGIMTQ--KNIKPDIVTYNI 470

Query: 601 IIKVFGQLV-AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
           +I  F +    EKA +                ++ +M   KI PN ++++ ++N    CN
Sbjct: 471 LIDGFCKTTEMEKANE----------------LWNEMISRKIFPNHISYAILVNG--YCN 512

Query: 660 SFEDASMLLEELRLFDNQV 678
                  + E  RL+D  +
Sbjct: 513 ----LGFVSEAFRLWDEMI 527


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 211/402 (52%), Gaps = 23/402 (5%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A ++F+  + EG+   V  +  L++   + G    AI +  SM + N +PN++ Y
Sbjct: 234 GKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAY 293

Query: 267 NAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           N +ID+  K     + V E   +F +M+  G+ PD  T+NSL+        W+    L N
Sbjct: 294 NTIIDSLCKD----RQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLN 349

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EMV+  I  ++  ++T++DA+CK   + +A +++  M  + + P+VVTY+ ++DG+    
Sbjct: 350 EMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRS 409

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            +D+A+ +F  M   G   +  SYN +++ Y ++ R ++A+ + ++M   G+  D VTYN
Sbjct: 410 EMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYN 469

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+ G    G+      +F +M A    P+L+TY  L+D   K     EAM + +  + +
Sbjct: 470 TLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS 529

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
            L AD+++Y+  ID +C+ G +E+A  L   ++ +G++P+V TYN +I    +       
Sbjct: 530 NLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRG----L 585

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
           +D+  +   K  E+      CS+D       G   N II+ F
Sbjct: 586 LDEANKLFRKMDENG-----CSRD-------GCIYNTIIRGF 615



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 208/410 (50%), Gaps = 7/410 (1%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDL 211
           C  D+ TF  L+R L   G+  +A+  F   +  E  + D     + M + L ++G    
Sbjct: 216 CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG-EGFQPDVVTYGTLM-NGLCKVGNTSA 273

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  +  + + +     V A++ +I +  +     EA ++F+ M    + P++ TYN++I 
Sbjct: 274 AIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIH 333

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           A C     ++KHV  + ++M+ + + P+ + F++++    + G+   A ++ + M+ RG+
Sbjct: 334 ALCNL--CEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGV 391

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
           + D+ TY  L+D  C  ++MD A ++   M  K   PNV +Y+ +I+GY +  R+D A+ 
Sbjct: 392 EPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMG 451

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +  +M   G+  D V+YNT++     +GR + A+ +  EM +SG   D VTY  LL    
Sbjct: 452 LLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLC 511

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K     E   + + ++   +  ++L Y+  ID   + G  + A  +F      GL+ DV 
Sbjct: 512 KNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVR 571

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            Y+ +I  LCK GL++ A  L  +M + G   +   YN+II  F RS  T
Sbjct: 572 TYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNET 621



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 201/398 (50%), Gaps = 7/398 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   G  S AI+     V++  R N      + +I  L +  +V  A N+F  
Sbjct: 258 YGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIA--YNTIIDSLCKDRQVTEAFNLFSE 315

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            + +G    ++ +++LI A       +   ++ N M    + PN+V ++ V+DA C +G 
Sbjct: 316 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGM 375

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           +   H  ++ D M++ GV+PD +T+ +L+   C R  + EA + +F+ MVH+G   ++ +
Sbjct: 376 IAIAH--DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVK-VFDTMVHKGCVPNVRS 432

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN L++  C+  +MD A  ++ +M  + +  + VTY+T+I G    GRL  A+ +F EM 
Sbjct: 433 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 492

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G   D V+Y  +L    K     EA+++ K +E S +  D + YN  + G  + G+ +
Sbjct: 493 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 552

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
             R +F  + +  + P++ TY+ +I    K GL  EA ++FR+  + G   D  +Y+ +I
Sbjct: 553 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTII 612

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
               ++     A  LL EM  EG   +V T   I++  
Sbjct: 613 RGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEML 650



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 186/395 (47%), Gaps = 57/395 (14%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV------V 284
           F+ L+++  +  +    +S+   M  + + P++ T N +I++       F H+       
Sbjct: 153 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINS-------FCHLRRLGYAF 205

Query: 285 EIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
            +   +L+ G QPD  TFN+L+  +C  G + EA  +LF++ +  G   D+ TY TL++ 
Sbjct: 206 SVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEAL-HLFDKTIGEGFQPDVVTYGTLMNG 264

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +CK      A  ++  M  KN  PNV+ Y+T+ID   K  ++ +A N+FSEM   GI  D
Sbjct: 265 LCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPD 324

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESS------------------------------ 433
             +YN+++     L  ++    +  EM +S                              
Sbjct: 325 IFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVD 384

Query: 434 -----GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
                G+  D VTY AL+ G+  + + DE  ++F+ M      PN+ +Y+ LI+ Y +  
Sbjct: 385 MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQ 444

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
              +AM +  +    GL AD V Y+ LI  LC  G ++ A++L  EM   G  P++VTY 
Sbjct: 445 RMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYR 504

Query: 549 SIIDAFGRS-ATTECTVDDVERDLGKQKESANLDA 582
            ++D   ++    E  V      L K  E +NLDA
Sbjct: 505 ILLDYLCKNHHLAEAMV------LLKAIEGSNLDA 533



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 138/267 (51%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F+ ML     P  + F  LL   ++   +    +L  +M   GI  D++T N L+++ C 
Sbjct: 138 FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 197

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  AF ++A++      P+  T++T+I G    G++ +AL++F +    G   D V+
Sbjct: 198 LRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVT 257

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T+++   K+G    A+ + + M     R + + YN ++    K  +  E   +F +M 
Sbjct: 258 YGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI 317

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              +SP++ TY++LI        +K    +  E   + +  +VV++S ++DALCK G++ 
Sbjct: 318 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIA 377

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            A  ++D M K G+ P+VVTY +++D 
Sbjct: 378 IAHDVVDMMIKRGVEPDVVTYTALMDG 404



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 161/332 (48%), Gaps = 5/332 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L N  EW          V  +   N    + S ++  L + G + +A ++ + 
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN--VVVFSTVVDALCKEGMIAIAHDVVDM 385

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +  G    V  ++AL+  +       EA+ VF++M      PN+ +YN +I+  C    
Sbjct: 386 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQR 445

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D    + + + M   G+  D +T+N+L+      G  + A  LF+EMV  G   D+ TY
Sbjct: 446 MD--KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 503

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             LLD +CK   +  A  ++  +   N+  +++ Y+  IDG  +AG L+ A ++FS +  
Sbjct: 504 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSS 563

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  D  +YN ++    K G  +EA  + ++M+ +G  +D   YN ++ G+ +  +   
Sbjct: 564 KGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFG 623

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
             ++ ++M A+  S ++ T + ++++ S  GL
Sbjct: 624 ATQLLQEMLAEGFSADVSTTTLIVEMLSDDGL 655



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/427 (22%), Positives = 182/427 (42%), Gaps = 24/427 (5%)

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           FN M+H         +  LL +I K         +  +M +  I P+V T + +I+ +  
Sbjct: 138 FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 197

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
             RL  A ++ +++  LG   D  ++NT++      G+  EAL +  +    G + D VT
Sbjct: 198 LRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVT 257

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  L+ G  K G      R+   M      PN++ Y+T+ID   K     EA  +F E  
Sbjct: 258 YGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI 317

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G+  D+  Y++LI ALC     +   +LL+EM    I PNVV +++++DA  +     
Sbjct: 318 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIA 377

Query: 562 CTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
              D V+  + +  E      +A +D  C + + D         + +KVF  +V +    
Sbjct: 378 IAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMD---------EAVKVFDTMVHKGCVP 428

Query: 616 GKKE------NRCR-QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
             +         C+ Q +   +G+ ++M    +  + VT++ +++        + A  L 
Sbjct: 429 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 488

Query: 669 EELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHF 726
            E+         V + +L+ Y  +++   +A+ L   ++  +       YN   D +   
Sbjct: 489 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 548

Query: 727 GQKRGAQ 733
           G+   A+
Sbjct: 549 GELEAAR 555


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 209/380 (55%), Gaps = 12/380 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A++S L   G++  A+ ++E  +  GY   V  ++ L+  + + G   EA+ +F+   +
Sbjct: 14  NALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVK 73

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++VTYNA+I+   K          I   M+   + PD +T+NSL+    + G  +
Sbjct: 74  RGFVPDVVTYNALINGFCKAD-KLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVD 132

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ-MDLAFEIMAEMPAKNISPNVVTYSTM 375
            AR L   +V +G   ++ TY+TL+  +C+  + +  A ++   +  +   P V TY+ +
Sbjct: 133 EARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNIL 189

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K  R+++A  +FS +   G+  D ++Y   +    K GR E+ALL+ K+M+  G 
Sbjct: 190 IDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGC 249

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D V++NA++ G  K+ + DE   +   M+A   SPN ++++TLI    + G +K+AM 
Sbjct: 250 VPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMT 309

Query: 496 IFREFKQAGLKADVVLYSALIDALCK---NGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            F+E  + G+K  VV Y+ L+D LCK    G ++ A++L D M ++G  P+VVTY+++ID
Sbjct: 310 TFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALID 369

Query: 553 AFGRSATTECTVDDVERDLG 572
             G++      +DD  R LG
Sbjct: 370 GLGKAG----KLDDARRLLG 385



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 193/384 (50%), Gaps = 35/384 (9%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++G++D A  IF+ A+  G+   V  ++ALI+ + ++    EA  +   M   NL P++V
Sbjct: 57  KVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVV 116

Query: 265 TYNAVIDA-CGKGGVD-------------------------------FKHVVEIFDDMLR 292
           TYN++++  C  G VD                                   +++F  +L+
Sbjct: 117 TYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLK 176

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
            G +P+  T+N L+    +      A  LF+ +V  G++ D  TY   +D +CK  +++ 
Sbjct: 177 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVED 236

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A  ++ +M  K   P+VV+++ +I+G  K  R+D+A  + S M+  G   + +S+NT++ 
Sbjct: 237 ALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 296

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK---QGKYDEVRRMFEQMKADC 469
              + G++++A+   KEM   G++   VTYN L+ G  K   +G+  E   +F+ M    
Sbjct: 297 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 356

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P+++TYS LID   K G   +A ++    +  G   +V  Y++LI  LC    V+ A+
Sbjct: 357 RVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEAL 416

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDA 553
            L   M ++G  P+ +TY +II A
Sbjct: 417 ELFVAMVEKGCVPDTITYGTIISA 440



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 212/417 (50%), Gaps = 35/417 (8%)

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
           M+++   PN +TYNA++     GG        +++ M++ G  PD +T+N+LL   C  G
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGG-RMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVG 59

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            L EA + +F+  V RG   D+ TYN L++  CK  ++D A  I+  M ++N+ P+VVTY
Sbjct: 60  ELDEALK-IFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTY 118

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS-IYAKLGRFEEALLVCKEME 431
           +++++G  K GR+D+A  +  +    G   + ++Y+T++S +  +L    EAL +   + 
Sbjct: 119 NSLVNGLCKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELRGVSEALKLFGSVL 175

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G   +  TYN L+ G  K+ + +E   +F  +    + P+ +TY+  ID   K G  +
Sbjct: 176 KQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 235

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +A+ + ++  + G   DVV ++A+I+ LCK   V+ A  LL  M  +G  PN +++N++I
Sbjct: 236 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 295

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
               R+              GK K++              +E  +   +   V   ++ +
Sbjct: 296 CGQCRA--------------GKWKKAMT----------TFKEMLKRGVKPTVVTYNILVD 331

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
              + ++E R ++ I     +F  M +    P+VVT+SA+++   +    +DA  LL
Sbjct: 332 GLCKARQEGRIKEAIT----LFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLL 384



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 115/219 (52%), Gaps = 4/219 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +  I  L + G+V+ A  + +    +G    V + +A+I+   +     EA  + + M+ 
Sbjct: 222 TVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA 281

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCS--RGG 313
               PN +++N +I    + G  +K  +  F +ML+ GV+P  +T+N L+  +C   + G
Sbjct: 282 KGCSPNAISFNTLICGQCRAG-KWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEG 340

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             + A  LF+ M+ +G   D+ TY+ L+D + K  ++D A  ++  M AK   PNV TY+
Sbjct: 341 RIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYN 400

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           ++I G     ++D+AL +F  M   G   D ++Y T++S
Sbjct: 401 SLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 127/269 (47%), Gaps = 33/269 (12%)

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           +R++YN +LS     GR  +A  + + M  +G   D VTYN LL G+ K G+ DE  ++F
Sbjct: 9   NRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIF 68

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           +        P+++TY+ LI+ + K     EA +I +      L  DVV Y++L++ LCKN
Sbjct: 69  DGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKN 128

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           G V+ A  L+     +G  PNV+TY+++I    R                 +  S  L  
Sbjct: 129 GRVDEARMLI---VDKGFSPNVITYSTLISGLCREL---------------RGVSEALKL 170

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
             S   +  +    T N +I   G L         KE+R  +       +F  + K  ++
Sbjct: 171 FGSVLKQGYEPEVPTYNILID--GLL---------KEDRVNEA----FELFSGLVKHGLE 215

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEEL 671
           P+ +T++  ++   +    EDA ++L+++
Sbjct: 216 PDAITYTVFIDGLCKAGRVEDALLMLKDM 244


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  205 bits (522), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 154/559 (27%), Positives = 261/559 (46%), Gaps = 49/559 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L +  +VD A+++F+  + +G       ++ +I    ++     A  VF  M  
Sbjct: 229 NTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVD 288

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             +KP+ VTYN +ID  C    VD      +F  M+  GV+PD +T+N+++    +    
Sbjct: 289 KGVKPSNVTYNTIIDGLCKAQAVD--RAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAI 346

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  +F +M+ +G+  D  TY  ++D +CK   +D A  +  +M  K + PN  TY+ +
Sbjct: 347 DKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCL 406

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I GY   G+ ++ +    EM    +  D  +Y  +L    K G+  EA  +   M   GI
Sbjct: 407 IHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGI 466

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           +     Y  +L GYGK+G   E+  +   M A+ +SPN   ++T+I  Y+K  +  E M 
Sbjct: 467 KPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMH 526

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           IF + KQ GL  +VV Y  LIDALCK G V+ AV   ++M  EG+ PN V +NS++    
Sbjct: 527 IFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGL- 585

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
                 CTVD  E+      E   L+ +         +  R D   I  F  ++     +
Sbjct: 586 ------CTVDKWEK-----VEELFLEML--------NQGIRPD---IVFFNTVLCNLCKE 623

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 675
           G+     R        +   M  + +KP+V++++ +++     + F  AS + E ++L D
Sbjct: 624 GRVMEARR--------LIDSMVCMGLKPDVISYNTLIDG----HCF--ASRMDEAVKLLD 669

Query: 676 NQVYG------VAHG-LLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
             V        V++  LL GY +      A  LF E+     +     YN + + L+  G
Sbjct: 670 GMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSG 729

Query: 728 Q-KRGAQLVVLEGKRRQVW 745
           +     +L V   K R++W
Sbjct: 730 RFSEARELYVNMIKSRKLW 748



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 204/404 (50%), Gaps = 5/404 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL  L   G+ ++A   F   +++  + +    +   M+   G+ G +    ++   
Sbjct: 438 YGLLLDYLCKNGKCNEARSLFDSMIRKGIKPS--VTIYGIMLHGYGKKGALSEMHDLLNL 495

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +  G       F+ +I AY +     E + +F  MK+  L PN+VTY  +IDA C  G 
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGR 555

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           VD    V  F+ M+  GV P+ + FNSL+        WE    LF EM+++GI  DI  +
Sbjct: 556 VD--DAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFF 613

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           NT+L  +CK  ++  A  ++  M    + P+V++Y+T+IDG+  A R+D+A+ +   M  
Sbjct: 614 NTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVS 673

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  + VSYNT+L  Y K GR + A  + +EM   G+     TYN +L G  + G++ E
Sbjct: 674 AGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSE 733

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            R ++  M       ++ TYS ++D + K   + EA +IF+      L+ D++ ++ +ID
Sbjct: 734 ARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMID 793

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            L K G  E A+ L   +   G+ P+VVTY  I +      + E
Sbjct: 794 GLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLE 837



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/542 (26%), Positives = 252/542 (46%), Gaps = 42/542 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L +   VD A+ +F+  ++ G       ++ +I    ++    +A  VF  M  
Sbjct: 299 NTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMID 358

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             +KP+ +TY  +ID  C    VD      +F  M+  GV+P+  T+N L+      G W
Sbjct: 359 KGVKPDNLTYTIIIDGLCKAQSVD--RAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQW 416

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E       EM    ++ D+FTY  LLD +CK  + + A  +   M  K I P+V  Y  M
Sbjct: 417 EEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIM 476

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + GY K G L +  ++ + M   GI  +   +NTV+  YAK    +E + +  +M+  G+
Sbjct: 477 LHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGL 536

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + VTY  L+    K G+ D+    F QM  + V+PN + +++L+        +++  +
Sbjct: 537 SPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEE 596

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F E    G++ D+V ++ ++  LCK G V  A  L+D M   G++P+V++YN++ID   
Sbjct: 597 LFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHC 656

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
            ++  +  V               LD M S        AG   N  I  +  L+      
Sbjct: 657 FASRMDEAV-------------KLLDGMVS--------AGLKPN--IVSYNTLLHGYCKA 693

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML----LEEL 671
           G+ +N       C+   F++M +  + P V T++ ILN   R   F +A  L    ++  
Sbjct: 694 GRIDNA-----YCL---FREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSR 745

Query: 672 RLFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKR 730
           +L+    Y +   +L G+ ++N + +A  +F  +  MD       +N + D L+  G+K 
Sbjct: 746 KLWSICTYSI---ILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKE 802

Query: 731 GA 732
            A
Sbjct: 803 DA 804



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 186/369 (50%), Gaps = 17/369 (4%)

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR---SGYCQEAISVFNSMKR---Y 257
           G LG  D  K +F+  L      +V A + L+S   R   S   + A+S FN M R    
Sbjct: 20  GNLGLHDALK-LFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSN 78

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
            + P+  TY+ VI   C  G ++       F  +L+ G + D I  N LL  +C    + 
Sbjct: 79  KVAPDCCTYSIVIGCFCRIGRLELGFAA--FGLILKTGWRVDDIVVNQLLKGLCDTKRVG 136

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI---MAEMPAKNISPNVVTY 372
           EA   L  +M   G    + +YNTLL  +C   + + A E+   M +    + SP+VV+Y
Sbjct: 137 EAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSY 196

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +I+G+   G++D A ++F EM   G+  D V+YNT++    K    + A  V ++M  
Sbjct: 197 NIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVE 253

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G++ + VTYN ++ G  K  + D    +F++M    V P+ +TY+T+ID   K      
Sbjct: 254 KGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDR 313

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A  +F++    G+K D V Y+ +ID LCK   ++ A  +  +M  +G++P+ +TY  IID
Sbjct: 314 AEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIID 373

Query: 553 AFGRSATTE 561
              ++ + +
Sbjct: 374 GLCKAQSVD 382



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 207/435 (47%), Gaps = 42/435 (9%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +L   G +G  S+        V      N   ++ + +I    +   +D   +IF  
Sbjct: 473 YGIMLHGYGKKGALSEMHDLLNLMVANGISPNH--RIFNTVICAYAKRAMIDEVMHIFIK 530

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G    V  +  LI A  + G   +A+  FN M    + PN V +N+++   G   V
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVY--GLCTV 588

Query: 279 D-FKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           D ++ V E+F +ML  G++PD + FN++L  +C  G + EA R L + MV  G+  D+ +
Sbjct: 589 DKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEA-RRLIDSMVCMGLKPDVIS 647

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YNTL+D  C  ++MD A +++  M +  + PN+V+Y+T++ GY KAGR+D+A  +F EM 
Sbjct: 648 YNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREML 707

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRF-----------------------------------E 421
             G+     +YNT+L+   + GRF                                   +
Sbjct: 708 RKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFD 767

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           EA  + + + S  ++ D +T+N ++ G  K G+ ++   +F  + A+ + P+++TY  + 
Sbjct: 768 EAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIA 827

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           +   + G  +E   +F   +++G   +  + +ALI  L   G +  A + L ++ ++   
Sbjct: 828 ENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFS 887

Query: 542 PNVVTYNSIIDAFGR 556
               T + +I  F R
Sbjct: 888 LEASTTSMLISLFSR 902



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 199/447 (44%), Gaps = 50/447 (11%)

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG---AQMDLA---FEIMAEMPAKNIS 366
           GL +A + LF+E++       +   N LL  + +    +   LA   F  M    +  ++
Sbjct: 23  GLHDALK-LFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVA 81

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL-L 425
           P+  TYS +I  + + GRL+     F  +   G  +D +  N +L       R  EA+ +
Sbjct: 82  PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM---KADCVSPNLLTYSTLID 482
           + ++M   G R   V+YN LL G   + + +E R +   M   +    SP++++Y+ +I+
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            +   G   +A  +F E    G+  DVV Y+ +ID LCK   V+ A  +  +M ++G++P
Sbjct: 202 GFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN------LDAMCSQDDKDVQEAGR 596
           N VTYN+IID   ++   +      ++ + K  + +N      +D +C     D  E   
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEG-- 316

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENR----------CR-QEILCILGVFQKMHKLKIKPNV 645
                  VF Q++     +G K +           C+ Q I    GVFQ+M    +KP+ 
Sbjct: 317 -------VFQQMI----DRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDN 365

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRLFDNQVY---GVAHGLLMGY-RDNIWVQALSLF 701
           +T++ I++   +  S + A  + ++  + D  V    G  + L+ GY     W + +   
Sbjct: 366 LTYTIIIDGLCKAQSVDRAEGVFQQ--MIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRI 423

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQ 728
            E+   D       Y  L D L   G+
Sbjct: 424 KEMSAHDLEPDVFTYGLLLDYLCKNGK 450



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 125/286 (43%), Gaps = 38/286 (13%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G+V  A+ + ++ +  G    V +++ LI  +  +    EA+ + + M    LKPN
Sbjct: 620 LCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPN 679

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +V+YN ++   C  G +D  +   +F +MLR GV P   T+N++L    R G +  AR L
Sbjct: 680 IVSYNTLLHGYCKAGRIDNAYC--LFREMLRKGVTPGVETYNTILNGLFRSGRFSEAREL 737

Query: 322 FNEMVHR-----------------------------------GIDQDIFTYNTLLDAICK 346
           +  M+                                      +  DI T+N ++D + K
Sbjct: 738 YVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFK 797

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
           G + + A ++ A +PA  + P+VVTY  + +   + G L++   +FS M+  G   +   
Sbjct: 798 GGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHM 857

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            N ++      G    A     +++      +A T + L+  + ++
Sbjct: 858 LNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSRE 903


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  205 bits (522), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 208/398 (52%), Gaps = 4/398 (1%)

Query: 179 FAFAVKREERKNDQGKLASAMISILGRL---GKVDLAKNIFETALNEGYGNTVYAFSALI 235
           FAF+   +  K      A+   +++  L   GK+  A ++F+  + EG+   V  +  LI
Sbjct: 98  FAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLI 157

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV 295
           +   +     EA ++F+ M    + PN+VTYN++I    K   ++KHV  + ++M+ + +
Sbjct: 158 NGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL-CEWKHVTTLMNEMVDSKI 216

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
            PD  T N+++    + G+   A ++ + M+HRG++ ++ TYN L+D  C   ++D+A +
Sbjct: 217 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 276

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           +   M  K+   NV++Y+T+I+GY K   +D A+ +F EM    +  + V+YNT++    
Sbjct: 277 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 336

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
            +GR ++A+ +  EM + G   D VTY  L     K    D+   + + ++     P++ 
Sbjct: 337 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 396

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
            Y+T++D   + G  ++A  +F      GL+ +V  Y+ +I  LCK GL+  A  L  EM
Sbjct: 397 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 456

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            K G  PN  TYN I   F R+     T++ +E  L +
Sbjct: 457 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 494



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 190/363 (52%), Gaps = 7/363 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L  L +VD A +     L  G+      F+ LI      G   EA+ +F+ M  
Sbjct: 84  AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 143

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGG 313
              +PN+VTY  +I+   K     + V E   IF +M+  G+ P+ +T+NSL+    +  
Sbjct: 144 EGFQPNVVTYGTLINGLCKD----RQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLC 199

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            W+    L NEMV   I  D+FT NT++DA+CK   +  A +++  M  + + PNVVTY+
Sbjct: 200 EWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYN 259

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            ++DG+     +D A+ +F  M       + +SYNT+++ Y K+   ++A+ + +EM   
Sbjct: 260 ALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 319

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            +  + VTYN L+ G    G+  +   +F +M A    P+L+TY TL D   K     +A
Sbjct: 320 ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKA 379

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           M + +  + +    D+ +Y+ ++D +C+ G +E A  L   ++ +G++PNV TYN +I  
Sbjct: 380 MALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHG 439

Query: 554 FGR 556
             +
Sbjct: 440 LCK 442



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 231/483 (47%), Gaps = 37/483 (7%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           +D A + F   L++    +   F+ L+++  ++ +    +S+   M  + + P++ T   
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           VI++ C    VDF         +L+ G QPD  TF +L+  +C  G + EA  +LF++M+
Sbjct: 86  VINSLCHLNRVDF--AFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEAL-HLFDKMI 142

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G   ++ TY TL++ +CK  Q+  AF I +EM  K ISPN+VTY+++I G  K     
Sbjct: 143 GEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK 202

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
               + +EM    I  D  + NTV+    K G   EA  V   M   G+  + VTYNAL+
Sbjct: 203 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262

Query: 447 GGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
            G+  + + D   ++F+ M   DCV+ N+++Y+TLI+ Y K     +AM +F E  +  L
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVA-NVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 321

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE---- 561
             + V Y+ LI  LC  G ++ A+SL  EM   G  P++VTY ++ D   ++   +    
Sbjct: 322 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 381

Query: 562 --CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
               ++    D   Q  +  LD MC         AG  ++        L +  + +G + 
Sbjct: 382 LLKAIEGSNWDPDIQIYTTILDGMC--------RAGELEDA-----RDLFSNLSSKGLQP 428

Query: 620 N----------RCRQEILCILG-VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
           N           C+Q +L     +F +M+K    PN  T++ I     R N       LL
Sbjct: 429 NVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELL 488

Query: 669 EEL 671
           EE+
Sbjct: 489 EEM 491



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 178/337 (52%), Gaps = 20/337 (5%)

Query: 223 GYGNTVYAFSALISAYG---RSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
           G    VY  + LI+++    R GY   A SV   + +   +P++VTY  +++   K    
Sbjct: 611 GIPPDVYTLNILINSFCHLRRLGY---AFSVLAKLLKLGFQPDVVTYGTLMNGLCK---- 663

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
                     M+  G+ PD  T+NSL+        W+    L NEMV+  I  ++  ++T
Sbjct: 664 ----------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 713

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++DA+CK   + +A +++  M  + + P+VVTY+ ++DG+     +D+A+ +F  M   G
Sbjct: 714 VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG 773

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
              +  SYN +++ Y ++ R ++A+ + ++M   G+  D VTYN L+ G    G+     
Sbjct: 774 CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAI 833

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +F +M A    P+L+TY  L+D   K     EAM + +  + + L AD+++Y+  ID +
Sbjct: 834 ALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGM 893

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           C+ G +E+A  L   ++ +G++P+V TYN +I    +
Sbjct: 894 CRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCK 930



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 197/398 (49%), Gaps = 7/398 (1%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
           A  +T L+R L   G+  +A+  F   +    + N        +I+ L +  +V  A NI
Sbjct: 115 ATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTY--GTLINGLCKDRQVTEAFNI 172

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CG 274
           F   + +G    +  +++LI    +    +   ++ N M    + P++ T N V+DA C 
Sbjct: 173 FSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCK 232

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQD 333
           +G V   H  ++ D M+  GV+P+ +T+N+L+   C R  + + A  +F+ MVH+    +
Sbjct: 233 EGMVAEAH--DVVDMMIHRGVEPNVVTYNALMDGHCLRNEV-DVAVKVFDTMVHKDCVAN 289

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           + +YNTL++  CK   +D A  +  EM  + ++PN VTY+T+I G    GRL DA+++F 
Sbjct: 290 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 349

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           EM   G   D V+Y T+     K    ++A+ + K +E S    D   Y  +L G  + G
Sbjct: 350 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAG 409

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           + ++ R +F  + +  + PN+ TY+ +I    K GL  EA ++F E  + G   +   Y+
Sbjct: 410 ELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYN 469

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            +     +N      + LL+EM   G   +V T   ++
Sbjct: 470 LITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 507



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 174/346 (50%), Gaps = 16/346 (4%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+    L ++  A ++    L  G+   V  +  L++     G C+        M    
Sbjct: 622 LINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMN-----GLCK--------MITKG 668

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           + P++ TYN++I A C     ++KHV  + ++M+ + + P+ + F++++    + G+   
Sbjct: 669 ISPDIFTYNSLIHALCNL--CEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAI 726

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A ++ + M+ RG++ D+ TY  L+D  C  ++MD A ++   M  K   PNV +Y+ +I+
Sbjct: 727 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 786

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GY +  R+D A+ +  +M   G+  D V+YNT++     +GR + A+ +  EM +SG   
Sbjct: 787 GYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 846

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D VTY  LL    K     E   + + ++   +  ++L Y+  ID   + G  + A  +F
Sbjct: 847 DLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLF 906

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
                 GL+ DV  Y+ +I  LCK GL++ A  L  +M +  I  N
Sbjct: 907 SNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSN 952



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 145/622 (23%), Positives = 264/622 (42%), Gaps = 99/622 (15%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++  L + G V  A ++ +  ++ G    V  ++AL+  +        A+ VF++M  
Sbjct: 224 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 283

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
            +   N+++YN +I+  C    VD    + +F++M R  + P+ +T+N+L+  +C  G L
Sbjct: 284 KDCVANVISYNTLINGYCKIQSVD--KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 341

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +A  +LF+EMV RG   D+ TY TL D +CK   +D A  ++  +   N  P++  Y+T
Sbjct: 342 QDAI-SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 400

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++DG  +AG L+DA ++FS +   G+  +  +YN ++    K G   EA  +  EM  +G
Sbjct: 401 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 460

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              +  TYN +  G+ +  +      + E+M A   S ++ T + L+ + S  GL +   
Sbjct: 461 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVK 520

Query: 495 QI----------------------------------------------FREFKQAGLKAD 508
           QI                                              F           
Sbjct: 521 QILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPS 580

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG--RSATTECTVDD 566
            V ++ L+ ++ K     + +SL  +M   GI P+V T N +I++F   R      +V  
Sbjct: 581 TVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLA 640

Query: 567 VERDLGKQKESAN----LDAMCSQDDKDVQEAGRTDNQII---------KVFGQLVAEKA 613
               LG Q +       ++ +C    K +     T N +I         K    L+ E  
Sbjct: 641 KLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 700

Query: 614 GQGKKEN----------RCRQEILCIL-GVFQKMHKLKIKPNVVTFSAILNA-CSRCNSF 661
                 N           C++ ++ I   V   M K  ++P+VVT++A+++  C R    
Sbjct: 701 NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLR---- 756

Query: 662 EDASMLLEELRLFDNQVYGVAHGLLMGYRD-NIWV----------QALSLFDEVKLMDSS 710
              S + E +++FD  V+    G +   R  NI +          +A+ L +++ L    
Sbjct: 757 ---SEMDEAVKVFDTMVHK---GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLI 810

Query: 711 TASAFYNALTDMLWHFGQKRGA 732
             +  YN L   L H G+ + A
Sbjct: 811 ADTVTYNTLIHGLCHVGRLQHA 832



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 148/306 (48%), Gaps = 3/306 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V+  + ++ A  + G   EA  V + M    ++PN+VTYNA++D  C +  VD    V++
Sbjct: 220 VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV--AVKV 277

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           FD M+      + I++N+L+    +    + A  LF EM  + +  +  TYNTL+  +C 
Sbjct: 278 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 337

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A  +  EM A+   P++VTY T+ D   K   LD A+ +   ++      D   
Sbjct: 338 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 397

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T+L    + G  E+A  +   + S G++ +  TYN ++ G  KQG   E  ++F +M 
Sbjct: 398 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 457

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            +  SPN  TY+ +   + +       +++  E    G   DV   + L+  L  +GL +
Sbjct: 458 KNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQ 517

Query: 527 SAVSLL 532
           S   +L
Sbjct: 518 SVKQIL 523



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 136/599 (22%), Positives = 232/599 (38%), Gaps = 138/599 (23%)

Query: 88  SKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILK 147
           S+ EL P+ +   +T      H GR + A+S  H +VA   +  +  +     +L D L 
Sbjct: 317 SRQELTPN-TVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYR----TLSDYLC 371

Query: 148 KFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLG 207
           K        D    LL+ +     W   IQ +                 + ++  + R G
Sbjct: 372 KNRH----LDKAMALLKAIEG-SNWDPDIQIY-----------------TTILDGMCRAG 409

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           +++ A+++F    ++G    V+ ++ +I    + G   EA  +F+ M +    PN  TYN
Sbjct: 410 ELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYN 469

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL------ 321
            +     +     +  +E+ ++ML  G   D  T   L+ + S  GL ++ + +      
Sbjct: 470 LITRGFLRNNEALR-TIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSS 528

Query: 322 ----------------------------------------FNEMVHR------------- 328
                                                   FN M+H              
Sbjct: 529 SSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLL 588

Query: 329 ----------------------GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
                                 GI  D++T N L+++ C   ++  AF ++A++      
Sbjct: 589 TSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQ 648

Query: 367 PNVVTYSTMIDGYAKA------------GRLDDALNMFSEMKFLGIGLDR---------- 404
           P+VVTY T+++G  K               L  AL    E K +   L+           
Sbjct: 649 PDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNV 708

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V ++TV+    K G    A  V   M   G+  D VTY AL+ G+  + + DE  ++F+ 
Sbjct: 709 VVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDT 768

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M      PN+ +Y+ LI+ Y +     +AM +  +    GL AD V Y+ LI  LC  G 
Sbjct: 769 MVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGR 828

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS-ATTECTVDDVERDLGKQKESANLDA 582
           ++ A++L  EM   G  P++VTY  ++D   ++    E  V      L K  E +NLDA
Sbjct: 829 LQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMV------LLKAIEGSNLDA 881



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 152/404 (37%), Gaps = 65/404 (16%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           S+NT  S        +EAL     M         V +N LL    K   +  +  +  QM
Sbjct: 12  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71

Query: 466 KADCVSPNLLTY-----------------------------------STLIDVYSKGGLY 490
            +  + P++ T                                    +TLI      G  
Sbjct: 72  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            EA+ +F +    G + +VV Y  LI+ LCK+  V  A ++  EM  +GI PN+VTYNS+
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191

Query: 551 IDAFGRSA----TTECTVDDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIK- 603
           I    +       T    + V+  +     + N  +DA+C +    V EA    + +I  
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKE--GMVAEAHDVVDMMIHR 249

Query: 604 -VFGQLVAEKAGQGKKENRC-RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
            V   +V   A     +  C R E+   + VF  M       NV++++ ++N   +  S 
Sbjct: 250 GVEPNVVTYNALM---DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSV 306

Query: 662 EDASMLLEEL---RLFDNQVY--GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFY 716
           + A  L EE+    L  N V    + HGL    R      A+SLF E+           Y
Sbjct: 307 DKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR---LQDAISLFHEMVARGQIPDLVTY 363

Query: 717 NALTDMLW---HFGQKRGAQLVVLEGKR----RQVWENVWSESC 753
             L+D L    H   K  A L  +EG       Q++  +    C
Sbjct: 364 RTLSDYLCKNRHL-DKAMALLKAIEGSNWDPDIQIYTTILDGMC 406


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  205 bits (522), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 190/364 (52%), Gaps = 1/364 (0%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G   + +I+   ++G+V+ A    +  + +G+      ++  +    ++G+   A+ V +
Sbjct: 267 GVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMD 326

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            M +    P++ TYN VI+   K G +      I + M+  G  PD  TFN+L+   S  
Sbjct: 327 LMLQEGHDPDVFTYNTVINCLSKNG-ELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQ 385

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              E A +L  E+  +G+  D++T+N L++A+CK     L   +  EM +   +P+ VTY
Sbjct: 386 NRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTY 445

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +ID     G+L +AL++ +EM+  G     V+YNT++    K  R EEA  V  +M++
Sbjct: 446 NILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDA 505

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            GI + AVT+N L+ G  K  + D+   + EQM  + + PN +TY++++  Y K G  K+
Sbjct: 506 QGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKK 565

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A  I       G + DVV Y  LI+ LCK G  + A+ LL  M  +GIRP    YN +I 
Sbjct: 566 AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQ 625

Query: 553 AFGR 556
           +  R
Sbjct: 626 SLFR 629



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 189/359 (52%), Gaps = 3/359 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++ A  +    +  G   T    + LI+ Y + G  ++A+           +P+ VTY
Sbjct: 246 GSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTY 305

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N  +   C  G V   H +++ D ML+ G  PD  T+N+++   S+ G  + A+ + N+M
Sbjct: 306 NTFVHGLCQNGHV--SHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 363

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V RG   D  T+NTL+ A+    +++ A ++  E+  K +SP+V T++ +I+   K G  
Sbjct: 364 VDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDP 423

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
              + +F EMK  G   D V+YN ++     +G+   AL +  EMES+G  +  VTYN +
Sbjct: 424 HLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTI 483

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +    K+ + +E   +F+QM A  +S + +T++TLID   K     +A ++  +  + GL
Sbjct: 484 IDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGL 543

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           + + + Y++++   CK G ++ A  +L+ MT  G   +VVTY ++I+   ++  T+  +
Sbjct: 544 QPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVAL 602



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 139/556 (25%), Positives = 254/556 (45%), Gaps = 34/556 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L R  +V  A  + E   + G       F+ L+  +   G  + A+ V   M  
Sbjct: 201 NTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMME 260

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               P  VT N +I+  C  G V+    +      + +G +PD++T+N+ +    + G  
Sbjct: 261 AGCSPTGVTVNVLINGYCKMGRVE--DALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHV 318

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  + + M+  G D D+FTYNT+++ + K  ++D A  I+ +M  +   P+  T++T+
Sbjct: 319 SHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTL 378

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I   +   RL++AL++  E+   G+  D  ++N +++   K+G     + + +EM+SSG 
Sbjct: 379 IVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGC 438

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VTYN L+      GK      +  +M+++    + +TY+T+ID   K    +EA +
Sbjct: 439 TPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEE 498

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F +    G+    V ++ LID LCK   ++ A  L+++M KEG++PN +TYNSI+  + 
Sbjct: 499 VFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYC 558

Query: 556 RSATTECTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
           +    +   D +E       E         ++ +C        +AGRT   +  + G  +
Sbjct: 559 KQGNIKKAADILETMTANGFEIDVVTYGTLINGLC--------KAGRTQVALKLLRGMRI 610

Query: 610 AEKAGQGKKENRC------RQEILCILGVFQKMHKLKIKPNVVTFSAILNA-CSRCNSFE 662
                  K  N        R  +   L +F++M ++   P+ +T+  +  + C      +
Sbjct: 611 KGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIK 670

Query: 663 DASMLLEEL--RLFDNQVYG---VAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYN 717
           +A   L E+  + F  +      +A GLL    D+  + A+ L  E      S ASA   
Sbjct: 671 EAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAKFRESDASAIRG 730

Query: 718 ALT-----DMLWHFGQ 728
            L      D L  FG+
Sbjct: 731 YLKIRKYYDALATFGR 746



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 198/415 (47%), Gaps = 39/415 (9%)

Query: 280 FKHVVEIFDDMLRN---GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           F   V++  + L N   GVQ D + FN LL V   G   +   +++NEM  RGI  D+ T
Sbjct: 140 FDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVT 199

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
            NTL+ A+C+  Q+  A  ++ EM +  ++P+  T++T++ G+ + G ++ AL + ++M 
Sbjct: 200 LNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMM 259

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G     V+ N +++ Y K+GR E+AL   ++  + G   D VTYN  + G  + G   
Sbjct: 260 EAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVS 319

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
              ++ + M  +   P++ TY+T+I+  SK G   EA  I  +    G   D   ++ LI
Sbjct: 320 HALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLI 379

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-------------FGRSATTECT 563
            AL     +E A+ L  E+T +G+ P+V T+N +I+A             F    ++ CT
Sbjct: 380 VALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCT 439

Query: 564 VDDVERDL------GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF-GQLVAEKAGQG 616
            D+V  ++         K    LD +   +      +  T N II     ++  E+A + 
Sbjct: 440 PDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEE- 498

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                          VF +M    I  + VTF+ +++   +    +DA+ L+E++
Sbjct: 499 ---------------VFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQM 538


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 195/348 (56%), Gaps = 3/348 (0%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           +V LA ++    L  GY        +L++ + R     +A+S+ + M     +P++V YN
Sbjct: 135 QVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYN 194

Query: 268 AVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           A+ID+ C    V+    ++ F ++ R G++P+ +T+ +L+      G W  A  L  +M+
Sbjct: 195 AIIDSLCKTRRVN--DALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            R I  ++ TY+ LLDA  K  ++  A EI  EM   +I P++VTYS++I+G     R+D
Sbjct: 253 KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A  MF  M   G   D VSYNT+++ + K  R E+ + + ++M   G+  + VTYN L+
Sbjct: 313 EANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLI 372

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G+ + G  D+ +  F QM +  VSP++ TY+ L+      GL ++A+ IF + +++ + 
Sbjct: 373 QGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMD 432

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            D+V Y+ +I  +CK G VE A  L   ++ +G++P++VTY +++   
Sbjct: 433 LDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGL 480



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 193/346 (55%), Gaps = 1/346 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++++   R  +V  A ++ +  +  GY   + A++A+I +  ++    +A+  F  + R 
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRK 219

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            ++PN+VTY A+++     G  +     +  DM++  + P+ IT+++LL    + G    
Sbjct: 220 GIRPNVVTYTALVNGLCNSG-RWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLE 278

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A+ +F EMV   ID DI TY++L++ +C   ++D A ++   M +K   P+VV+Y+T+I+
Sbjct: 279 AKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLIN 338

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+ KA R++D + +F +M   G+  + V+YNT++  + ++G  ++A     +M+S G+  
Sbjct: 339 GFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSP 398

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  TYN LLGG    G  ++   +FE M+   +  +++TY+T+I    K G  ++A  +F
Sbjct: 399 DIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLF 458

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
                 GLK D+V Y+ ++  LC  GL     +L  +M +EG+  N
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN 504



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 156/284 (54%)

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +     + +F +M++    P  + FN LL+   +   ++   +L  +M   GI  D++T+
Sbjct: 64  IKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTF 123

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N +++  C   Q+ LA  ++ +M      P+ VT  ++++G+ +  R+ DA+++  +M  
Sbjct: 124 NIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           +G   D V+YN ++    K  R  +AL   KE+   GIR + VTY AL+ G    G++++
Sbjct: 184 IGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWND 243

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             R+   M    ++PN++TYS L+D + K G   EA +IF E  +  +  D+V YS+LI+
Sbjct: 244 AARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLIN 303

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            LC +  ++ A  + D M  +G  P+VV+YN++I+ F ++   E
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVE 347



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 184/350 (52%), Gaps = 9/350 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I  L +  +V+ A + F+    +G    V  ++AL++    SG   +A  +   M +
Sbjct: 194 NAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIK 253

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN++TY+A++DA  K G       EIF++M+R  + PD +T++SL+         +
Sbjct: 254 RKITPNVITYSALLDAFVKNG-KVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +F+ MV +G   D+ +YNTL++  CK  +++   ++  +M  + +  N VTY+T+I
Sbjct: 313 EANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLI 372

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+ + G +D A   FS+M   G+  D  +YN +L      G  E+AL++ ++M+ S + 
Sbjct: 373 QGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMD 432

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTY  ++ G  K GK ++   +F  +    + P+++TY+T++      GL  E   +
Sbjct: 433 LDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEAL 492

Query: 497 FREFKQAGL-KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           + + KQ GL K D +L          +G +  +  L+ +M   G  P+++
Sbjct: 493 YTKMKQEGLMKNDSMLCLG-------DGDITISAELIKKMLSCGYAPSLL 535



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 151/316 (47%), Gaps = 40/316 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L N G W+ A +     +KR+   N                            
Sbjct: 228 YTALVNGLCNSGRWNDAARLLRDMIKRKITPN---------------------------- 259

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
                    V  +SAL+ A+ ++G   EA  +F  M R ++ P++VTY+++I+  C    
Sbjct: 260 ---------VITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDR 310

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D  +  ++FD M+  G  PD +++N+L+    +    E    LF +M  RG+  +  TY
Sbjct: 311 IDEAN--QMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTY 368

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           NTL+    +   +D A E  ++M +  +SP++ TY+ ++ G    G L+ AL +F +M+ 
Sbjct: 369 NTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQK 428

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             + LD V+Y TV+    K G+ E+A  +   +   G++ D VTY  ++ G   +G   E
Sbjct: 429 SEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHE 488

Query: 458 VRRMFEQMKADCVSPN 473
           V  ++ +MK + +  N
Sbjct: 489 VEALYTKMKQEGLMKN 504



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 159/354 (44%), Gaps = 66/354 (18%)

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A NLF EMV       I  +N LL AI K  + D+   +  +M    I  ++ T++ +I+
Sbjct: 69  AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            +    ++  AL++  +M  LG   DRV+  ++++ + +  R  +A+ +  +M   G R 
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D V YNA++    K  + ++    F+++    + PN++TY+ L++     G + +A ++ 
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           R+  +  +  +V+ YSAL+DA  KNG V  A  + +EM +  I P++VTY          
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTY---------- 298

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
                              S+ ++ +C  D  D  EA    NQ+   F  +V++      
Sbjct: 299 -------------------SSLINGLCLHDRID--EA----NQM---FDLMVSK------ 324

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                        G F         P+VV+++ ++N   +    ED   L  ++
Sbjct: 325 -------------GCF---------PDVVSYNTLINGFCKAKRVEDGMKLFRKM 356



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/379 (22%), Positives = 169/379 (44%), Gaps = 45/379 (11%)

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           +L DA+N+F EM         V +N +LS   K+ +++  + + K+ME  GIR D  T+N
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            ++  +    +      +  +M      P+ +T  +L++ + +     +A+ +  +  + 
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           G + D+V Y+A+ID+LCK   V  A+    E+ ++GIRPNVVTY ++++    S      
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWN-D 243

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
              + RD+ K+K + N+    +  D  V+             G+++  K           
Sbjct: 244 AARLLRDMIKRKITPNVITYSALLDAFVKN------------GKVLEAKE---------- 281

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH 683
                   +F++M ++ I P++VT+S+++N     +  ++A+      ++FD  V     
Sbjct: 282 --------IFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN------QMFDLMVSKGCF 327

Query: 684 GLLMGYRD--NIWVQALSLFDEVKLMDSSTASAF------YNALTDMLWHFGQKRGAQLV 735
             ++ Y    N + +A  + D +KL    +          YN L    +  G    AQ  
Sbjct: 328 PDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEF 387

Query: 736 VLEGKRRQVWENVWSESCL 754
             +     V  ++W+ + L
Sbjct: 388 FSQMDSFGVSPDIWTYNIL 406


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 181/333 (54%), Gaps = 1/333 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  ++ LI AY + G   EA  +  SM    ++PNL++YN +I+   + G   K   EI 
Sbjct: 45  VVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREG-SMKEAWEIL 103

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           ++M   G  PD +T+N+LL    + G +  A  +  EMV  G+   + TY  L++++CK 
Sbjct: 104 EEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA 163

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             ++ A E   +M  + + PN  TY+T+IDG+++ G L++A  + +EM   G     V+Y
Sbjct: 164 RNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 223

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N  +  +  L R EEAL V +EM   G+  D V+Y+ ++ G+ ++G+ D   +M ++M  
Sbjct: 224 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 283

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             VSP+ +TYS+LI    +     EA  + +E    GL  D   Y+ LI+A C  G +  
Sbjct: 284 KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNK 343

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           A+ L DEM  +G  P+ VTY+ +I+   + A T
Sbjct: 344 ALHLHDEMIHKGFLPDAVTYSVLINGLNKQART 376



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/270 (36%), Positives = 155/270 (57%), Gaps = 2/270 (0%)

Query: 290 MLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           M+R+ V P+  T+N L+   CS G L +     F EM   G   ++ TYNTL+DA CK  
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGEL-QKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 59

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++D AF ++  M +K + PN+++Y+ +I+G  + G + +A  +  EM + G   D V+YN
Sbjct: 60  RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 119

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+L+ Y K G F +AL++  EM  +G+    VTY AL+    K    +     F+QM+  
Sbjct: 120 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 179

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + PN  TY+TLID +S+ GL  EA +I  E  ++G    VV Y+A I   C    +E A
Sbjct: 180 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEA 239

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           + ++ EM ++G+ P+VV+Y++II  F R  
Sbjct: 240 LGVVQEMVEKGLAPDVVSYSTIISGFCRKG 269



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 200/396 (50%), Gaps = 7/396 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           Y  L+R   + GE  K + CF       ER      + +   +I    ++G++D A  + 
Sbjct: 13  YNILIRGFCSVGELQKGLGCFG----EMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLL 68

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           ++  ++G    + +++ +I+   R G  +EA  +   M      P+ VTYN +++   K 
Sbjct: 69  KSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE 128

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G +F   + I  +M+RNGV P  +T+ +L+    +      A   F++M  RG+  +  T
Sbjct: 129 G-NFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y TL+D   +   ++ A+ I+ EM     SP+VVTY+  I G+    R+++AL +  EM 
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  D VSY+T++S + + G  + A  + +EM   G+  DAVTY++L+ G  +  +  
Sbjct: 248 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 307

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E   + ++M    + P+  TY+TLI+ Y   G   +A+ +  E    G   D V YS LI
Sbjct: 308 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 367

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           + L K      A  LL ++  E   P+ VTY+++I+
Sbjct: 368 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 403



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 177/342 (51%), Gaps = 9/342 (2%)

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M R  + PN+ TYN +I   C  G  + +  +  F +M RNG  P+ +T+N+L+    + 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVG--ELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKM 58

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  + A  L   M  +G+  ++ +YN +++ +C+   M  A+EI+ EM  K  +P+ VTY
Sbjct: 59  GRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTY 118

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T+++GY K G    AL + +EM   G+    V+Y  +++   K      A+    +M  
Sbjct: 119 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 178

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G+R +  TY  L+ G+ +QG  +E  R+  +M     SP+++TY+  I  +      +E
Sbjct: 179 RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEE 238

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A+ + +E  + GL  DVV YS +I   C+ G ++ A  +  EM ++G+ P+ VTY+S+I 
Sbjct: 239 ALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQ 298

Query: 553 AFG--RSATTECTVDDVERDLGKQKE----SANLDAMCSQDD 588
                R  T  C +     D+G   +    +  ++A C + D
Sbjct: 299 GLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 340



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 169/368 (45%), Gaps = 57/368 (15%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G   +V  ++ALI++  ++     A+  F+ M+   L+PN  TY  +ID   + G+    
Sbjct: 145 GVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGL-LNE 203

Query: 283 VVEIFDDMLRNGVQPDRITFNSLL---AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
              I ++M  +G  P  +T+N+ +    V  R    E A  +  EMV +G+  D+ +Y+T
Sbjct: 204 AYRILNEMTESGFSPSVVTYNAFIHGHCVLER---MEEALGVVQEMVEKGLAPDVVSYST 260

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++   C+  ++D AF++  EM  K +SP+ VTYS++I G  +  RL +A ++  EM  +G
Sbjct: 261 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 320

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           +  D  +Y T+++ Y   G   +AL +  EM   G   DAVTY+ L+ G  KQ +  E +
Sbjct: 321 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 380

Query: 460 RMFEQMKADCVSPNLLTYSTLID------------------------------------- 482
           R+  ++  +   P+ +TY TLI+                                     
Sbjct: 381 RLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 440

Query: 483 ------VYS-------KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
                 VY+       +GG   +A  +++E   +G     V    LI AL K G+ E   
Sbjct: 441 HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMS 500

Query: 530 SLLDEMTK 537
            ++ +  +
Sbjct: 501 EVIGDTLR 508



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 180/390 (46%), Gaps = 22/390 (5%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  +      ++A++ F     R  R N+  +  + +I    R G ++ A  I   
Sbjct: 153 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNE--RTYTTLIDGFSRQGLLNEAYRILNE 210

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
               G+  +V  ++A I  +      +EA+ V   M    L P++V+Y+ +I   C KG 
Sbjct: 211 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 270

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           +D     ++  +M+  GV PD +T++SL+  +C    L EA  +L  EM+  G+  D FT
Sbjct: 271 LD--RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC-DLSQEMLDMGLPPDEFT 327

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y TL++A C    ++ A  +  EM  K   P+ VTYS +I+G  K  R  +A  +  ++ 
Sbjct: 328 YTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLI 387

Query: 397 FLGIGLDRVSYNTVL---------SIYAKL------GRFEEALLVCKEMESSGIRKDAVT 441
           +       V+Y+T++         S+ A +      G   EA  V + M     +     
Sbjct: 388 YEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAV 447

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN ++ G+ + G   +   ++++M      P+ +T  TLI    K G+ +E  ++  +  
Sbjct: 448 YNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL 507

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSL 531
           ++    +  L   L++   K G +E+ +++
Sbjct: 508 RSCRLNEAELAKVLVEINHKEGNMEAVLNV 537



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 120/255 (47%), Gaps = 39/255 (15%)

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           VSPN+ TY+ LI  +   G  ++ +  F E ++ G   +VV Y+ LIDA CK G ++ A 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            LL  M+ +G++PN+++YN II+   R               G  KE+  +        +
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCRE--------------GSMKEAWEIL-------E 104

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
           ++   G T +++   +  L+        KE    Q ++    +  +M +  + P+VVT++
Sbjct: 105 EMGYKGFTPDEV--TYNTLLNGYC----KEGNFHQALV----IHAEMVRNGVSPSVVTYT 154

Query: 650 AILNACSRCNSFEDASMLLEELRLF----DNQVYGVAHGLLMGY-RDNIWVQALSLFDEV 704
           A++N+  +  +   A    +++R+     + + Y     L+ G+ R  +  +A  + +E+
Sbjct: 155 ALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT---LIDGFSRQGLLNEAYRILNEM 211

Query: 705 KLMDSSTASAFYNAL 719
                S +   YNA 
Sbjct: 212 TESGFSPSVVTYNAF 226


>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Brachypodium distachyon]
          Length = 821

 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 243/506 (48%), Gaps = 21/506 (4%)

Query: 65  PAATSTTVAPNPKPFHSLSPL--PSSKSELAPDFS-GRRSTRFVSKMHFGRPKIAMSTRH 121
           P A    V P  +P  +  P      +  ++ D+  GRR+ R       G    A+  RH
Sbjct: 17  PEAPPRVVRPPRRPPRTPGPPPWAERRPSISVDYDRGRRTARVEVD---GIGADALPARH 73

Query: 122 SVVAE-----------EALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRG 170
            +  E           E    V A  R +    D +           ++  L+RE+   G
Sbjct: 74  RLRVEGSRWQRDWKVSEVTARVLALPRAEAHAVDAVLNCWAGRFARRNFPLLIREITFAG 133

Query: 171 EWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYA 230
               A+  F + +K +E    +  +   MI +  R  ++D A+ +F              
Sbjct: 134 SLQHAVHVFRW-MKNQENYCARNDIYGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADI 192

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +++LI A+ R+G  + AI++ + M R  + P+  TYN VI+ACG  G ++K  +E+   M
Sbjct: 193 YNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAG-NWKKALELCKKM 251

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
            RNGV PD +T N +L+    G  +  A   F  M    I  D FT N ++  + K  Q 
Sbjct: 252 TRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQY 311

Query: 351 DLAFEIMAEMPAKNIS--PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
             A E++  M  K     P+VVTY++++  Y   G+++D   +F  M   G+  + VSYN
Sbjct: 312 GEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYN 371

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +L  YA  G   +AL + K ++ +G+R D V+Y  LL  YG+ G+ ++ R  F++M+ +
Sbjct: 372 ALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKN 431

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
              PN+++Y+ LID Y   G++KEA+ +  E ++ G+  DVV  S L+ A  +   +   
Sbjct: 432 SCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKI 491

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAF 554
            ++L+     GI+ N+V YNS I ++
Sbjct: 492 DTILEAAKSRGIKLNIVCYNSGIGSY 517



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 191/353 (54%), Gaps = 4/353 (1%)

Query: 207 GKVDLAKNIFETALN-EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           G +  A ++F    N E Y      +  +I  + R     +A  +F  M+ +  KP+   
Sbjct: 133 GSLQHAVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADI 192

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           YN++I A  + G  ++  + I DDMLR  + P R T+N+++  C   G W+ A  L  +M
Sbjct: 193 YNSLIHAHARAG-QWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKM 251

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              G+  D+ T+N +L A   G+Q   A      M   NI+P+  T + +I    K G+ 
Sbjct: 252 TRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQY 311

Query: 386 DDALNMFSEM--KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            +A+ + + M  K      D V+Y +++  Y   G+ E+   V   M + G++ + V+YN
Sbjct: 312 GEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYN 371

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           ALLG Y  +G + +   +F+ +K + + P++++Y+TL++ Y + G  ++A + F+E ++ 
Sbjct: 372 ALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKN 431

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             + ++V Y+ALIDA    G+ + A+SLL EM K+GI P+VV+ ++++ A GR
Sbjct: 432 SCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGR 484



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 201/383 (52%), Gaps = 3/383 (0%)

Query: 170 GEWSKAIQCF-AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTV 228
           G++ +AI+   +   KR +   D     S M S     GKV+  K +F+  + EG    +
Sbjct: 309 GQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYY-VCGKVEDCKAVFDMMVAEGVKPNI 367

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
            +++AL+ AY   G   +A+ +F  +K+  L+P++V+Y  +++A G+ G   K   E F 
Sbjct: 368 VSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEK-AREAFK 426

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +M +N  +P+ +++N+L+      G+++ A +L +EM   GI  D+ + +TLL A  +  
Sbjct: 427 EMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCR 486

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           Q+     I+    ++ I  N+V Y++ I  Y   G    AL +++ M    +  D V+YN
Sbjct: 487 QITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYN 546

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            ++S   K+G++ E+L   ++M    I      Y++L+  Y KQGK  E    F  MK  
Sbjct: 547 ILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKES 606

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
              P++LTY+ +I+ Y+  G ++ A  +F+E +   ++ D ++ S+L++AL +    E  
Sbjct: 607 GCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERV 666

Query: 529 VSLLDEMTKEGIRPNVVTYNSII 551
           + L++ M ++ I  N   Y  II
Sbjct: 667 LQLMELMKEKCIPLNQKAYFEII 689



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 135/535 (25%), Positives = 242/535 (45%), Gaps = 49/535 (9%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI--F 216
           Y  ++   G  G W KA++      K+  R      L +  I +         +K I  F
Sbjct: 228 YNNVINACGAAGNWKKALE----LCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYF 283

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM--KRYNLKPNLVTYNAVIDA-- 272
           E           +  + +I    + G   EAI + NSM  KR    P++VTY +++ +  
Sbjct: 284 EMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYY 343

Query: 273 -CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            CGK     +    +FD M+  GV+P+ +++N+LL   +  G+   A  +F  +   G+ 
Sbjct: 344 VCGK----VEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLR 399

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D+ +Y TLL+A  +  Q + A E   EM   +  PN+V+Y+ +ID Y  AG   +A+++
Sbjct: 400 PDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISL 459

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
             EM+  GI  D VS +T+L+   +  +  +   + +  +S GI+ + V YN+ +G Y  
Sbjct: 460 LHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLN 519

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G Y +   ++  M A  V+P+ +TY+ LI    K G Y E+++ F +     +     +
Sbjct: 520 FGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEV 579

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           YS+LI +  K G +  A S    M + G  P+V+TY ++I+A+               D 
Sbjct: 580 YSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYN--------------DD 625

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
           G  + + +L           +E      Q   +    + E   +G +  R       +L 
Sbjct: 626 GSWRNAWDL----------FKEMEGNTVQPDAIICSSLMEALNRGSQHER-------VLQ 668

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
           + + M +  I  N   +  I+ +CS    ++ AS ++E L   D+ +  ++ G L
Sbjct: 669 LMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHL---DSSLSSISVGTL 720



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 224/493 (45%), Gaps = 34/493 (6%)

Query: 181 FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           F   +E R      + +++I    R G+   A NI +  L      +   ++ +I+A G 
Sbjct: 178 FFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGA 237

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
           +G  ++A+ +   M R  + P+LVT+N V+ A  K G  +   +  F+ M    + PD  
Sbjct: 238 AGNWKKALELCKKMTRNGVGPDLVTHNIVLSAF-KNGSQYSKAIAYFEMMKGANIAPDTF 296

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGID--QDIFTYNTLLDAICKGAQMDLAFEIMA 358
           T N ++    + G +  A  L N M  +      D+ TY +++ +     +++    +  
Sbjct: 297 TLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFD 356

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
            M A+ + PN+V+Y+ ++  YA  G   DAL +F  +K  G+  D VSY T+L+ Y + G
Sbjct: 357 MMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSG 416

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           + E+A    KEM  +  R + V+YNAL+  YG  G + E   +  +M+ D + P++++ S
Sbjct: 417 QPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSIS 476

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           TL+    +     +   I    K  G+K ++V Y++ I +    G    A+ L   M   
Sbjct: 477 TLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMAS 536

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
            + P+ VTYN +I          C V       GK  ES        +D  D++     +
Sbjct: 537 NVNPDAVTYNILISGL-------CKV-------GKYAESLKF----FEDMVDLRIPLTKE 578

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
                V+  L+     QGK        +      F  M +    P+V+T++A++ A +  
Sbjct: 579 -----VYSSLICSYVKQGK--------LTEAESTFSSMKESGCLPDVLTYTAMIEAYNDD 625

Query: 659 NSFEDASMLLEEL 671
            S+ +A  L +E+
Sbjct: 626 GSWRNAWDLFKEM 638



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 172/375 (45%), Gaps = 36/375 (9%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  IF+     G    V +++ L++AYGRSG  ++A   F  M++ + +PN+V+YNA+ID
Sbjct: 386 ALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALID 445

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR-------GGLWEAARN---- 320
           A G  G+ FK  + +  +M ++G+ PD ++ ++LL  C R         + EAA++    
Sbjct: 446 AYGSAGM-FKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIK 504

Query: 321 ------------------------LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
                                   L+  M+   ++ D  TYN L+  +CK  +   + + 
Sbjct: 505 LNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKF 564

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
             +M    I      YS++I  Y K G+L +A + FS MK  G   D ++Y  ++  Y  
Sbjct: 565 FEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYND 624

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
            G +  A  + KEME + ++ DA+  ++L+    +  +++ V ++ E MK  C+  N   
Sbjct: 625 DGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKA 684

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y  +I   S    +K A +I      +     V   + L+  L K G  E  + L  +M 
Sbjct: 685 YFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFYKMM 744

Query: 537 KEGIRPNVVTYNSII 551
                  V TY  ++
Sbjct: 745 SSCSTVGVSTYTVLL 759



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 179/399 (44%), Gaps = 46/399 (11%)

Query: 280 FKHVVEIFDDM-------LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
            +H V +F  M        RN +      +  ++ + +R    + AR LF EM       
Sbjct: 135 LQHAVHVFRWMKNQENYCARNDI------YGMMIRLHARHSQIDQARGLFFEMQEWRCKP 188

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D   YN+L+ A  +  Q   A  IM +M    I P+  TY+ +I+    AG    AL + 
Sbjct: 189 DADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELC 248

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            +M   G+G D V++N VLS +    ++ +A+   + M+ + I  D  T N ++    K 
Sbjct: 249 KKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKD 308

Query: 453 GKYDEVRRMFEQM--KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           G+Y E   +   M  K     P+++TY++++  Y   G  ++   +F      G+K ++V
Sbjct: 309 GQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIV 368

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y+AL+ A    G+   A+ +   + + G+RP+VV+Y ++++A+GRS   E    +  ++
Sbjct: 369 SYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPE-KAREAFKE 427

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
           + K     N+ +                N +I  +G      AG  K+           +
Sbjct: 428 MRKNSCRPNIVSY---------------NALIDAYGS-----AGMFKEA----------I 457

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
            +  +M K  I P+VV+ S +L AC RC        +LE
Sbjct: 458 SLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILE 496



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/338 (21%), Positives = 163/338 (48%), Gaps = 2/338 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +++  GR  ++     I E A + G    +  +++ I +Y   G   +A+ ++  M  
Sbjct: 476 STLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMA 535

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            N+ P+ VTYN +I    K G  +   ++ F+DM+   +   +  ++SL+    + G   
Sbjct: 536 SNVNPDAVTYNILISGLCKVG-KYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLT 594

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A + F+ M   G   D+ TY  +++A         A+++  EM    + P+ +  S+++
Sbjct: 595 EAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLM 654

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +   +  + +  L +   MK   I L++ +Y  +++  + L  ++ A  + + ++SS   
Sbjct: 655 EALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLSS 714

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
               T N LL   GK GK + + ++F +M + C +  + TY+ L+      G +++ +++
Sbjct: 715 ISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIEV 774

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
            +  + AG+   + +Y  ++  + ++  ++  V+L+ E
Sbjct: 775 LQWMEDAGVSPTLYMYQNVLPYIWRDNSMDY-VTLMQE 811


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 249/532 (46%), Gaps = 40/532 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI+   R  K+  A ++   A   GY      FS L++ +   G   EA+++ + M  
Sbjct: 138 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 197

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              +P+LVT + +I+  C KG V     + + D M+  G QPD +T+  +L    + G  
Sbjct: 198 MKQRPDLVTVSTLINGLCLKGRV--SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 255

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A +LF +M  R I   +  Y+ ++D++CK    D A  +  EM  K I  +VVTYS++
Sbjct: 256 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 315

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G    G+ DD   M  EM    I  D V+++ ++ ++ K G+  EA  +  EM + GI
Sbjct: 316 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 375

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D +TYN+L+ G+ K+    E  +MF+ M +    P+++TYS LI+ Y K     + M+
Sbjct: 376 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 435

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +FRE    GL  + + Y+ L+   C++G + +A  L  EM   G+ P+VVTY  ++D   
Sbjct: 436 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 495

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
            +      ++  E+    QK    L                     I ++  ++      
Sbjct: 496 DNGELNKALEIFEK---MQKSRMTLG--------------------IGIYNIIIHGMCNA 532

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR--- 672
            K ++           +F  +    +KP+VVT++ ++    +  S  +A ML  +++   
Sbjct: 533 SKVDDA--------WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 584

Query: 673 -LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
              D+  Y +     +G   +  + ++ L +E+K+   S  S+    + DML
Sbjct: 585 CTPDDFTYNILIRAHLG--GSGLISSVELIEEMKVCGFSADSSTIKMVIDML 634



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 189/397 (47%), Gaps = 17/397 (4%)

Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAM 199
           D+ +K E +   A    Y+ ++  L   G +  A+  F       E K  +  +   S++
Sbjct: 260 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF----NEMEMKGIKADVVTYSSL 315

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I  L   GK D    +    +       V  FSALI  + + G   EA  ++N M    +
Sbjct: 316 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 375

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            P+ +TYN++ID   K         ++FD M+  G +PD +T++ L+    +    +   
Sbjct: 376 APDTITYNSLIDGFCKENC-LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 434

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            LF E+  +G+  +  TYNTL+   C+  +++ A E+  EM ++ + P+VVTY  ++DG 
Sbjct: 435 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 494

Query: 380 AKAGRLDDALNMFSEMK----FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
              G L+ AL +F +M+     LGIG+    YN ++       + ++A  +   +   G+
Sbjct: 495 CDNGELNKALEIFEKMQKSRMTLGIGI----YNIIIHGMCNASKVDDAWSLFCSLSDKGV 550

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D VTYN ++GG  K+G   E   +F +MK D  +P+  TY+ LI  +  G     +++
Sbjct: 551 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE 610

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           +  E K  G  AD      +ID L    L +S + +L
Sbjct: 611 LIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDML 647



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 187/398 (46%), Gaps = 33/398 (8%)

Query: 276 GGVDFK--HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G VD K    +++F+ M+++   P  I FN L +  +R   ++        M   GI+ D
Sbjct: 74  GIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHD 133

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++T   +++  C+  ++  AF ++         P+ +T+ST+++G+   GR+ +A+ +  
Sbjct: 134 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD 193

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M  +    D V+ +T+++     GR  EAL++   M   G + D VTY  +L    K G
Sbjct: 194 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 253

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
                  +F +M+   +  +++ YS +ID   K G + +A+ +F E +  G+KADVV YS
Sbjct: 254 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 313

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           +LI  LC +G  +    +L EM    I P+VVT++++ID F +           E  L +
Sbjct: 314 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK-----------EGKLLE 362

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
            KE  N         + +     T N +I  F            KEN C  E      +F
Sbjct: 363 AKELYN-----EMITRGIAPDTITYNSLIDGFC-----------KEN-CLHE---ANQMF 402

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             M     +P++VT+S ++N+  +    +D   L  E+
Sbjct: 403 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 440


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/465 (29%), Positives = 222/465 (47%), Gaps = 40/465 (8%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           I E  L  G     ++F+ LI ++ R+    +A++ F  MKR   KP+L T+  ++D   
Sbjct: 141 IHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLC 200

Query: 275 KGGVDFKHVVEIFDDMLRNG-VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           K G+D K   E+F +M+  G V PDR    +++    +    + AR +F +M   G   D
Sbjct: 201 KAGMDEK-AFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
              YNT++D + K      A +++  M AK   P  VTY  +++   KAG L+ A  +F 
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFR 319

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M   G   + V Y +++  +AK GR +EA  +  EM  +G R D +T+  ++ G  K G
Sbjct: 320 VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSG 379

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
            +++  + FE+M      PN++TY+T+I   SK G    A +I +     G   D V Y 
Sbjct: 380 NFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYI 439

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            L+D  CK G ++ A  LLDE+ K    PN+  Y+S++       + E T+D    DL +
Sbjct: 440 CLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLD----DLFE 495

Query: 574 QKESA--NLD-AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
           Q ++A  NLD  +C      + + GR D                       CR       
Sbjct: 496 QSKAAAENLDPGLCCSIIVGLCKTGRLDEA---------------------CR------- 527

Query: 631 GVFQKMHKLKIKPNVVTFSAILNA-C-SRCNSFEDASMLLEELRL 673
            +FQ+M     KP+  T++ ++N  C SR N  E A  LL +L +
Sbjct: 528 -IFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEM 571



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 230/489 (47%), Gaps = 25/489 (5%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +++ L + G ++ A+ +F      G+      +++LI  + +SG  +EA S+F+ M    
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +P+++T+  +ID   K G +F+   + F++M+R G +P+ +T+ +++   S+ G    A
Sbjct: 361 YRPDVITHTVMIDGLCKSG-NFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +   M+  G   D  TY  LLD  CK  ++D A +++ E+   + SPN+  YS+++ G
Sbjct: 420 FRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKG 479

Query: 379 YAKAGRLDDALN-MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
               G +++ L+ +F + K     LD     +++    K GR +EA  + + M S G + 
Sbjct: 480 LCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKP 539

Query: 438 DAVTYNALLGGY--GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           DA TYN L+ G    ++ + +    +   ++     P+ +TY+ L     K G    A++
Sbjct: 540 DATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVK 599

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +  E    G  ADVV Y+AL   LC  G V+ AVSL  EM ++G  P+   Y  II+   
Sbjct: 600 MLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLI 659

Query: 556 RSATTECTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
           +    E      +  +GK ++      +A + A+C         AG  D    +  G L 
Sbjct: 660 KGKKLEDACKFFDEMIGKGQKPTVATYTALVQALC--------HAGNVDEAFHRFEGMLA 711

Query: 610 -AEKAGQ-----GKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
             E  G            C+  ++   L +F+ M      P  VT +++ +   R    E
Sbjct: 712 RGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTE 771

Query: 663 DASMLLEEL 671
            A  LL+E+
Sbjct: 772 KAQELLQEM 780



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 169/647 (26%), Positives = 299/647 (46%), Gaps = 68/647 (10%)

Query: 132 VTAFAR-----DDVSLGDILKKFEFKLCGADDYTFLLRE--LGNRGEWSKAIQCFAFAVK 184
           + +FAR     D V+  +I+K+   K C  D +TFL+    L   G   KA + F   + 
Sbjct: 161 IRSFARTRRADDAVTCFEIMKR---KRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMA 217

Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
                 D+  L +AM+  L +  +V  A+ +F      G+     A++ +I    ++G+ 
Sbjct: 218 MGFVPPDRA-LHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHA 276

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           QEA+ V ++M      P  VTY  ++++  K G   +   E+F  M  +G +P+ + + S
Sbjct: 277 QEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT-LERAEELFRVMAASGFRPNSVIYTS 335

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L+   ++ G  + A +LF+EMV  G   D+ T+  ++D +CK    + A +   EM    
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
             PNVVTY+T+I G +K GR+ +A  +   M   G   D V+Y  +L  + KLGR +EA 
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE-VRRMFEQMK--ADCVSPNLLTYSTLI 481
            +  E++      +   Y++L+ G    G  +  +  +FEQ K  A+ + P L    ++I
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC--SII 513

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN--GLVESAVSLLDEMTKEG 539
               K G   EA +IF+     G K D   Y+ LI+ LC++    VE A +LL ++   G
Sbjct: 514 VGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVG 573

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA----NLD-----AMCSQDDKD 590
             P+ VTY  +           C + +V+R +   +E++    N D     A+C+     
Sbjct: 574 YLPDAVTYTPLCIGL-------CKIGEVDRAVKMLEEASSRGWNADVVAYTALCT----G 622

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAG--------------QGKK-ENRCRQEILCILGVFQK 635
           +   G+ D + + +F ++V +                 +GKK E+ C+         F +
Sbjct: 623 LCYQGQVD-RAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACK--------FFDE 673

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG---VAHGLLMGYRDN 692
           M     KP V T++A++ A     + ++A    E + L   ++ G   +   L+ G+   
Sbjct: 674 MIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGM-LARGELVGSVMIYDALIHGFCKA 732

Query: 693 IWVQ-ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           + V  AL LF+++    +   +    +L D L   G+   AQ ++ E
Sbjct: 733 LKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQE 779



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 129/292 (44%), Gaps = 2/292 (0%)

Query: 233 ALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDML 291
           ++I    ++G   EA  +F  M     KP+  TYN +I+  C       +    +  D+ 
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
             G  PD +T+  L     + G  + A  +  E   RG + D+  Y  L   +C   Q+D
Sbjct: 571 MVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVD 630

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A  +  EM  +  +P+   Y  +I+G  K  +L+DA   F EM   G      +Y  ++
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALV 690

Query: 412 SIYAKLGRFEEALLVCKEMESSG-IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
                 G  +EA    + M + G +    + Y+AL+ G+ K  K D   ++FE M +   
Sbjct: 691 QALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            P  +T ++L D   + G  ++A ++ +E    G       ++A++D L K+
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS 802



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/291 (19%), Positives = 115/291 (39%), Gaps = 60/291 (20%)

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           E +G + D  TYN L+     +  Y +   + E+M    ++PN  +++ LI  +++    
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT-------------- 536
            +A+  F   K+   K D+  +  L+D LCK G+ E A  +  EM               
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 537 ----------------------KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
                                 K G  P+ + YN++ID   ++   +  +  ++  L K 
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 575 KESAN------LDAMCSQDDKDVQE--------AGRTDNQIIKVFGQLVAEKAGQGKKEN 620
                      ++++C     +  E        +G   N +I  +  L+   A  G+ + 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVI--YTSLIHGFAKSGRMKE 348

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            C         +F +M +   +P+V+T + +++   +  +FE A+   EE+
Sbjct: 349 AC--------SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 206/375 (54%), Gaps = 17/375 (4%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +  +++   + G+ Q+A  +   M++ + KPN  TY  VIDA  K G+       + ++M
Sbjct: 181 YGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGM-LDGATSLLNEM 239

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
            +  + PD  T+++L+    +   WE  R LF EM+H  I  ++ T+N+++D +CK  ++
Sbjct: 240 KQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           + A EIM  M  K + P+V+TY+ +IDGY   G++D A  +F  M    I  D +SYN +
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNIL 359

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           ++ YA+  + +EA+ VC+E+   G++   VT N LL G  + G+    +  F++M +   
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            P+L T+ TL+  Y K GL +EAM  F + ++     ++ +Y+A+ID LCKNG ++ A +
Sbjct: 420 IPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHA 479

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
             +++   G+ P+V+TY ++I  + +         D  +D+ ++ E    D  C  D+  
Sbjct: 480 TFEKLPLIGLHPDVITYTAMISGYCQEGLL-----DEAKDMLRKME----DNGCLADN-- 528

Query: 591 VQEAGRTDNQIIKVF 605
                RT N I++ F
Sbjct: 529 -----RTYNVIVRGF 538



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 216/449 (48%), Gaps = 40/449 (8%)

Query: 281 KHVVEIFDDMLRNGV-QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
           K  V +F  ++R  + +P+ + + +++    + G  + A +L   M       +  TY  
Sbjct: 159 KDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTI 218

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++DA CK   +D A  ++ EM  K+I P++ TYST+ID   K  + ++   +F EM  L 
Sbjct: 219 VIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLN 278

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I  +  ++N+V+    K G+ E+A  + + M   G+  D +TYN ++ GYG +G+ D  R
Sbjct: 279 IYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAR 338

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +F+ M    + P++++Y+ LI+ Y++     EAMQ+ RE  Q GLK  +V  + L+  L
Sbjct: 339 EIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGL 398

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
            + G  +SA +  DEM   G  P++ T+ +++  + ++   E  +    + L +++E  N
Sbjct: 399 FELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHK-LERRREDTN 457

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
                                 I+++  ++      GK +             F+K+  +
Sbjct: 458 ----------------------IQIYTAVIDGLCKNGKLDKA--------HATFEKLPLI 487

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGV-AHGLLMGYRDNIW 694
            + P+V+T++A+++   +    ++A  +L ++     L DN+ Y V   G L   R N  
Sbjct: 488 GLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFL---RSNKV 544

Query: 695 VQALSLFDEVKLMDSSTASAFYNALTDML 723
            +  +  +E+     S  +A    L D++
Sbjct: 545 SEMKAFLEEIAGKSFSFEAATVELLMDII 573



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 120/498 (24%), Positives = 223/498 (44%), Gaps = 44/498 (8%)

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAV-IDACGKGGV--DFKHV------VEIFDDMLRN 293
           YC    + F S   Y++ P   + N   I   G  GV  +F++V        +F  M+R 
Sbjct: 8   YCLNG-NPFFSFFAYSIAPRHYSTNTCSISVKGNFGVSNEFQNVKCLDDAFSLFRQMVRT 66

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
              P   +F+ LL        + +  +LF E+    I    F  + ++++ C   + DL 
Sbjct: 67  KPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLG 126

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG-LDRVSYNTVLS 412
           F ++A    K I  N VT++T+I G     ++ DA+++F ++    I   + V Y TV++
Sbjct: 127 FSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMN 186

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              K G  ++A  + + ME    + +  TY  ++  + K G  D    +  +MK   + P
Sbjct: 187 GLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPP 246

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           ++ TYSTLID   K   ++    +F E     +  +V  ++++ID LCK G VE A  ++
Sbjct: 247 DIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIM 306

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQ 592
             M ++G+ P+V+TYN IID +G          D  R++         D+M ++      
Sbjct: 307 RYMIEKGVDPDVITYNMIIDGYGLRGQV-----DRAREI--------FDSMINKS----- 348

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
                +  II  +  L+   A Q K +          + V +++ +  +KP++VT + +L
Sbjct: 349 ----IEPDIIS-YNILINGYARQKKIDEA--------MQVCREISQKGLKPSIVTCNVLL 395

Query: 653 NACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSS 710
           +        + A    +E+    +      H  L+G  +++ +  +A+S F +++     
Sbjct: 396 HGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRED 455

Query: 711 TASAFYNALTDMLWHFGQ 728
           T    Y A+ D L   G+
Sbjct: 456 TNIQIYTAVIDGLCKNGK 473



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 150/290 (51%), Gaps = 1/290 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  L + GKV+ A+ I    + +G    V  ++ +I  YG  G    A  +F+SM  
Sbjct: 287 NSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMIN 346

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            +++P++++YN +I+   +        +++  ++ + G++P  +T N LL      G  +
Sbjct: 347 KSIEPDIISYNILINGYARQK-KIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTK 405

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +A+N F+EM+  G   D++T+ TLL    K   ++ A     ++  +    N+  Y+ +I
Sbjct: 406 SAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVI 465

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  K G+LD A   F ++  +G+  D ++Y  ++S Y + G  +EA  + ++ME +G  
Sbjct: 466 DGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCL 525

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            D  TYN ++ G+ +  K  E++   E++     S    T   L+D+ ++
Sbjct: 526 ADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAE 575


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 250/510 (49%), Gaps = 37/510 (7%)

Query: 180 AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYG 239
           AF +  + R       ++A++++L R G   LA+  +   L+       Y  + ++ +Y 
Sbjct: 109 AFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYC 168

Query: 240 RSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDR 299
           ++     A +V + M++  + P++VT+N +IDA  + G D    + + D M   G++P  
Sbjct: 169 KTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAG-DVDAAIALVDSMANRGLKPGI 227

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           +T+NS+L    +   ++ A+ +F  M    +  D+ ++N L+   C+  ++  A +   E
Sbjct: 228 VTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKE 287

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M  + ++P+VV++S +I  +++ G +D A     EMK LG+  D V Y  V+  + + G 
Sbjct: 288 MQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGS 347

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
             EAL V  EM   G   D VTYN LL G  KQ +  +  ++  +M+   V+P+L T++T
Sbjct: 348 MSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTT 407

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LI  Y + G ++ A+Q+F    +  L+ DVV Y++LID +C+ G +  A  L D+M    
Sbjct: 408 LIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHARE 467

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           I PN +TY+ +ID    S   +  V+D    L +  +  NL  +            RT N
Sbjct: 468 ILPNHITYSILID----SHCEKGQVEDAFGFLDEMVKKGNLPNI------------RTYN 511

Query: 600 QIIKVFGQLVAEKAG----QGKKENRCRQEILCI----------------LGVFQKMHKL 639
            IIK + +    K G    Q  +++    +++                    VF  M K 
Sbjct: 512 SIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKE 571

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLE 669
            ++P+ VT++ I+N  S   + +DA  + +
Sbjct: 572 MVRPDAVTYNMIINGFSEQGNMQDAGRVFK 601



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 197/406 (48%), Gaps = 17/406 (4%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA------SAMISILGRLGK 208
           G   Y  +L+ L     + KA + F        R  DQ  +A      + +I    R+G+
Sbjct: 226 GIVTYNSVLKGLCKHRRFDKAKEVF--------RTMDQCSVAPDVRSFNILIGGFCRVGE 277

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           V  A   ++   +      V +FS LI  + R G    A +    MK   L P+ V Y  
Sbjct: 278 VKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTM 337

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVH 327
           VI    + G      + + D+M+  G  PD +T+N+LL  +C +  L +A + L NEM  
Sbjct: 338 VIGGFCRAG-SMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEK-LLNEMEE 395

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           RG+  D+ T+ TL+   C+    + A ++   +  + + P+VVTY+++IDG  + G L  
Sbjct: 396 RGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAK 455

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  ++ +M    I  + ++Y+ ++  + + G+ E+A     EM   G   +  TYN+++ 
Sbjct: 456 ANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIK 515

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           GY + G   + ++  ++M+ D V P+L+T++TLI  Y K      A  +F   ++  ++ 
Sbjct: 516 GYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRP 575

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           D V Y+ +I+   + G ++ A  +   M   GI P+  TY S+I+ 
Sbjct: 576 DAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLING 621



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 180/351 (51%), Gaps = 9/351 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I +  R G++D A          G       ++ +I  + R+G   EA+ V + M  
Sbjct: 301 SCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVG 360

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVV----EIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           +   P++VTYN +++   K     +H +    ++ ++M   GV PD  TF +L+    R 
Sbjct: 361 FGCLPDVVTYNTLLNGLCK-----QHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQ 415

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G +E A  LF+ ++ + +  D+ TYN+L+D +C+   +  A E+  +M A+ I PN +TY
Sbjct: 416 GNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITY 475

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           S +ID + + G+++DA     EM   G   +  +YN+++  Y + G  ++     ++M  
Sbjct: 476 SILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQ 535

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             +  D +T+N L+ GY K+        +F  M+ + V P+ +TY+ +I+ +S+ G  ++
Sbjct: 536 DNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQD 595

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           A ++F+    +G++ D   Y +LI+     G  + A  L DEM   G  P+
Sbjct: 596 AGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 189/369 (51%), Gaps = 31/369 (8%)

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           N+LLAV SR G    A+  +  ++    + + +T N ++ + CK  + D A  +++EM  
Sbjct: 126 NALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEK 185

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
           + + P+VVT++ +ID   +AG +D A+ +   M   G+    V+YN+VL    K  RF++
Sbjct: 186 RCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDK 245

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A  V + M+   +  D  ++N L+GG+ + G+  E  + +++M+   V+P+++++S LI 
Sbjct: 246 AKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIG 305

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
           ++S+ G    A    RE K  GL  D V+Y+ +I   C+ G +  A+ + DEM   G  P
Sbjct: 306 LFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLP 365

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII 602
           +VVTYN++++   +    +  + D E+ L + +E      +C+                 
Sbjct: 366 DVVTYNTLLNGLCK----QHRLLDAEKLLNEMEERGVTPDLCT----------------- 404

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
             F  L+     QG  EN         L +F  + + +++P+VVT++++++   R     
Sbjct: 405 --FTTLIHGYCRQGNFEN--------ALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLA 454

Query: 663 DASMLLEEL 671
            A+ L +++
Sbjct: 455 KANELWDDM 463



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 161/316 (50%), Gaps = 1/316 (0%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G + + +I    R G +  A  + +  +  G    V  ++ L++   +     +A  + N
Sbjct: 332 GVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLN 391

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            M+   + P+L T+  +I    + G +F++ +++FD +LR  ++PD +T+NSL+    R 
Sbjct: 392 EMEERGVTPDLCTFTTLIHGYCRQG-NFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRK 450

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G    A  L+++M  R I  +  TY+ L+D+ C+  Q++ AF  + EM  K   PN+ TY
Sbjct: 451 GDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTY 510

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +++I GY ++G +        +M+   +  D +++NT++  Y K      A  V   ME 
Sbjct: 511 NSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEK 570

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             +R DAVTYN ++ G+ +QG   +  R+F+ M    + P+  TY +LI+ +   G  K+
Sbjct: 571 EMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQ 630

Query: 493 AMQIFREFKQAGLKAD 508
           A Q+  E    G   D
Sbjct: 631 AFQLHDEMIHRGFAPD 646



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/403 (21%), Positives = 162/403 (40%), Gaps = 70/403 (17%)

Query: 355 EIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY 414
           EI++ + A + +P    +  +I  Y ++ +  +A   F  +    + +   + N +L++ 
Sbjct: 73  EIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVL 132

Query: 415 AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
           ++ G    A    + + SS    +A T N ++  Y K  ++D    +  +M+  CV P  
Sbjct: 133 SRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFP-- 190

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
                                            DVV ++ LIDA  + G V++A++L+D 
Sbjct: 191 ---------------------------------DVVTHNVLIDARFRAGDVDAAIALVDS 217

Query: 535 MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEA 594
           M   G++P +VTYNS++    +            R   K KE       CS     V   
Sbjct: 218 MANRGLKPGIVTYNSVLKGLCK-----------HRRFDKAKEVFRTMDQCS-----VAPD 261

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKIKPNVVTFSAILN 653
            R+ N +I  F                CR  E+   +  +++M    + P+VV+FS ++ 
Sbjct: 262 VRSFNILIGGF----------------CRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIG 305

Query: 654 ACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSST 711
             SR    + A   L E++       GV + +++G   R     +AL + DE+       
Sbjct: 306 LFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLP 365

Query: 712 ASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
               YN L + L    +   A+ ++ E + R V  ++ + + L
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTL 408


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/356 (33%), Positives = 189/356 (53%), Gaps = 1/356 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L ++GK   A   F+     G   TVY ++ +I+   + G    A  +F  M+ 
Sbjct: 169 NTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEE 228

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +PN+VTYN +ID+  K  +     ++IF  M    + PD  T+NSL+        W+
Sbjct: 229 AGCQPNVVTYNILIDSLCKDKL-VNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWK 287

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L NEM    I  +IFT+N L+DAICK  ++  A  +   M    + P+VVTYS+++
Sbjct: 288 EASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLM 347

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            GY+    + +A  +F  M   G   D  SYN ++  Y K  R +EA  +  EM   G+ 
Sbjct: 348 YGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLT 407

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D V YN L+ G  + G+  E + +F+ M ++   P+L TYS L+D + K G   +A ++
Sbjct: 408 PDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRL 467

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           FR  +   LK D+ +Y+ LIDA+CK G ++ A  L  E+  +G+ PNV  Y +II+
Sbjct: 468 FRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIIN 523



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 182/365 (49%), Gaps = 4/365 (1%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           KL SA++ +    G V       E A   G    +Y  S LI  +        A SVF+ 
Sbjct: 99  KLLSAIVKMGQYYGAVISLSKQMELA---GLSPDIYTLSILIDCFSHLQRVDLAFSVFSK 155

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           M +  L+P+ VT+N +I+   K G  F   VE FDD   +G QP   T+ +++    + G
Sbjct: 156 MIKLGLQPDAVTFNTLINGLCKVG-KFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIG 214

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
              AA  LF +M   G   ++ TYN L+D++CK   ++ A +I + M AK ISP++ TY+
Sbjct: 215 ETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYN 274

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           ++I G     R  +A  + +EM  L I  +  ++N ++    K G+  EA  V K M   
Sbjct: 275 SLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEM 334

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G+  D VTY++L+ GY  + +  E R++F+ M      P+  +Y+ LI  Y K     EA
Sbjct: 335 GVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEA 394

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            Q+F E    GL  D V Y+ LI  LC+ G +  A  L   M   G  P++ TY+ ++D 
Sbjct: 395 KQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDG 454

Query: 554 FGRSA 558
           F +  
Sbjct: 455 FCKEG 459



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 191/399 (47%), Gaps = 44/399 (11%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           YT ++  L   GE + A   F    K+ E    Q  + +   +I  L +   V+ A +IF
Sbjct: 203 YTTIINGLCKIGETTAAAGLF----KKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIF 258

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
                +     ++ +++LI         +EA ++ N M   N+ PN+ T+N ++DA C +
Sbjct: 259 SYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKE 318

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G V       +F  M   GV+PD +T++SL+   S       AR LF+ M+ +G   D F
Sbjct: 319 GKV--SEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAF 376

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           +YN L+   CK  ++D A ++  EM  + ++P+ V Y+T+I G  + GRL +A ++F   
Sbjct: 377 SYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLF--- 433

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
                                           K M S+G   D  TY+ LL G+ K+G  
Sbjct: 434 --------------------------------KNMHSNGNLPDLFTYSMLLDGFCKEGYL 461

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            +  R+F  M++  + P++  Y+ LID   K G  K+A ++F E    GL  +V +Y+ +
Sbjct: 462 GKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTI 521

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           I+ LCK GL++ A+     M  +G  P+  +YN II  F
Sbjct: 522 INNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGF 560



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 203/447 (45%), Gaps = 38/447 (8%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +A++ FN M      P ++ +  ++ A  K G  +  V+ +   M   G+ PD  T + L
Sbjct: 77  DALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSIL 136

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +   S     + A ++F++M+  G+  D  T+NTL++ +CK  +   A E   +  A   
Sbjct: 137 IDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGC 196

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            P V TY+T+I+G  K G    A  +F +M+  G   + V+YN ++    K     EAL 
Sbjct: 197 QPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALD 256

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           +   M++  I  D  TYN+L+ G     ++ E   +  +M +  + PN+ T++ L+D   
Sbjct: 257 IFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAIC 316

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G   EA  +F+   + G++ DVV YS+L+        +  A  L D M  +G +P+  
Sbjct: 317 KEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAF 376

Query: 546 TYNSIIDAFGRSATTE-------------CTVDDVERD--------LGKQKESANLDAMC 584
           +YN +I  + ++   +              T D+V  +        LG+ +E+ +L    
Sbjct: 377 SYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDL---- 432

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
               K++   G   +  +  +  L+     +G      R        +F+ M    +KP+
Sbjct: 433 ---FKNMHSNGNLPD--LFTYSMLLDGFCKEGYLGKAFR--------LFRVMQSTYLKPD 479

Query: 645 VVTFSAILNACSRCNSFEDASMLLEEL 671
           +  ++ +++A  +  + +DA  L  EL
Sbjct: 480 IAMYNILIDAMCKFGNLKDARKLFSEL 506



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 141/285 (49%), Gaps = 9/285 (3%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK-HVVE- 285
           ++ F+ L+ A  + G   EA  VF +M    ++P++VTY++++      G   +  +VE 
Sbjct: 305 IFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLM-----YGYSLRMEIVEA 359

Query: 286 --IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
             +FD M+  G +PD  ++N L+    +    + A+ LFNEM+H+G+  D   YNTL+  
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +C+  ++  A ++   M +    P++ TYS ++DG+ K G L  A  +F  M+   +  D
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPD 479

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
              YN ++    K G  ++A  +  E+   G+  +   Y  ++    K+G  DE    F 
Sbjct: 480 IAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFR 539

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            M+ D   P+  +Y+ +I  + +      A Q+  E +  G  A+
Sbjct: 540 NMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAE 584



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 3/231 (1%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ +F+  + +G     ++++ LI  Y ++    EA  +FN M    L P+ V YN +I 
Sbjct: 359 ARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIH 418

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGI 330
              + G   +   ++F +M  NG  PD  T++ LL   C  G L +A R LF  M    +
Sbjct: 419 GLCQLG-RLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFR-LFRVMQSTYL 476

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             DI  YN L+DA+CK   +  A ++ +E+  + + PNV  Y+T+I+   K G LD+AL 
Sbjct: 477 KPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALE 536

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            F  M+  G   D  SYN ++  + +      A  +  EM   G   +A T
Sbjct: 537 AFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 126/301 (41%), Gaps = 35/301 (11%)

Query: 440 VTYNALLGGYGKQGKY-DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           + +  LL    K G+Y   V  + +QM+   +SP++ T S LID +S       A  +F 
Sbjct: 95  IQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFS 154

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +  + GL+ D V ++ LI+ LCK G    AV   D+    G +P V TY +II+   +  
Sbjct: 155 KMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIG 214

Query: 559 TTECTVDDVERDLGKQKESAN-----------LDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
            T          L K+ E A            +D++C   DK V EA       + +F  
Sbjct: 215 ETTAAA-----GLFKKMEEAGCQPNVVTYNILIDSLCK--DKLVNEA-------LDIFSY 260

Query: 608 LVAEKAGQGKKENRCRQEILCIL-------GVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           + A++            + LC          +  +M  L I PN+ TF+ +++A  +   
Sbjct: 261 MKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGK 320

Query: 661 FEDASMLLEELRLFDNQVYGVAHGLLM-GYRDNI-WVQALSLFDEVKLMDSSTASAFYNA 718
             +A  + + +     +   V +  LM GY   +  V+A  LFD +        +  YN 
Sbjct: 321 VSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNI 380

Query: 719 L 719
           L
Sbjct: 381 L 381


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 217/460 (47%), Gaps = 34/460 (7%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           I E  L  G     ++F+ LI ++ R+    +A++ F  MKR   KP+L T+  ++D   
Sbjct: 141 IHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLC 200

Query: 275 KGGVDFKHVVEIFDDMLRNG-VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           K G+D K   E+F +M+  G V PDR    +++    +    + AR +F +M   G   D
Sbjct: 201 KAGMDEK-AFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
              YNT++D + K      A +++  M AK   P  VTY  +++   KAG L+ A  +F 
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFR 319

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M   G   + V Y +++  +AK GR +EA  +  EM  +G R D +T+  ++ G  K G
Sbjct: 320 VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSG 379

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
            +++  + FE+M      PN++TY+T+I   SK G    A +I +     G   D V Y 
Sbjct: 380 NFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYI 439

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            L+D  CK G ++ A  LLDE+ K    PN+  Y+S+++      + E T+DD+      
Sbjct: 440 CLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKA 499

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
             E+ +    CS                      ++      G+ +  CR        +F
Sbjct: 500 AAETLDPGLCCS----------------------IIVGLCKTGRLDEACR--------IF 529

Query: 634 QKMHKLKIKPNVVTFSAILNA-C-SRCNSFEDASMLLEEL 671
           Q+M     KP+  T++ ++N  C SR N  E A  LL +L
Sbjct: 530 QRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDL 569



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 170/645 (26%), Positives = 300/645 (46%), Gaps = 64/645 (9%)

Query: 132 VTAFAR-----DDVSLGDILKKFEFKLCGADDYTFLLRE--LGNRGEWSKAIQCFAFAVK 184
           + +FAR     D V+  +I+K+   K C  D +TFL+    L   G   KA + F   + 
Sbjct: 161 IRSFARTRRADDAVTCFEIMKR---KRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMA 217

Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
                 D+  L +AM+  L +  +V  A+ +F      G+     A++ +I    ++G+ 
Sbjct: 218 MGFVPPDRA-LHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHA 276

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           QEA+ V ++M      P  VTY  ++++  K G   +   E+F  M  +G +P+ + + S
Sbjct: 277 QEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT-LERAEELFRVMAASGFRPNSVIYTS 335

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L+   ++ G  + A +LF+EMV  G   D+ T+  ++D +CK    + A +   EM    
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
             PNVVTY+T+I G +K GR+ +A  +   M   G   D V+Y  +L  + KLGR +EA 
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE-VRRMFEQMK--ADCVSPNLLTYSTLI 481
            +  E++      +   Y++L+ G    G  ++ +  +FEQ K  A+ + P L    ++I
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLC--CSII 513

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN--GLVESAVSLLDEMTKEG 539
               K G   EA +IF+     G K D   Y+ LI+ LC++    VE A +LL ++ K G
Sbjct: 514 VGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVG 573

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA----NLD-----AMCSQDDKD 590
             P+ VTY  +           C + +V+R +   +E++    N D     A+C+     
Sbjct: 574 YLPDAVTYTPLCIGL-------CKIGEVDRAVKMLEEASSRGWNADVVAYTALCT----G 622

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK---------- 640
           +   G+ D + + +F ++V  + G       C     CI+    K+ KL+          
Sbjct: 623 LCYQGQVD-RAVSLFQEMV-RQGGAPDAAAYC-----CIINGLIKVKKLEDACKFFDEMI 675

Query: 641 ---IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG---VAHGLLMGYRDNIW 694
               KP V T++A++ A     + ++A    E + L   ++ G   +   L+ G+   + 
Sbjct: 676 GKGQKPTVATYTALVQALCHAGNVDEAFHRFESM-LARGELVGSVMIYDALIHGFCKALK 734

Query: 695 VQ-ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           V  AL LF+++    +   +    +L D L   G+   AQ ++ E
Sbjct: 735 VDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQE 779



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 234/484 (48%), Gaps = 15/484 (3%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +++ L + G ++ A+ +F      G+      +++LI  + +SG  +EA S+F+ M    
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +P+++T+  +ID   K G +F+   + F++M+R G +P+ +T+ +++   S+ G    A
Sbjct: 361 YRPDVITHTVMIDGLCKSG-NFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +   M+  G   D  TY  LLD  CK  ++D A +++ E+   + SPN+  YS++++G
Sbjct: 420 FRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNG 479

Query: 379 YAKAGRLDDALN-MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
               G ++  L+ +F + K     LD     +++    K GR +EA  + + M S G + 
Sbjct: 480 LCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKP 539

Query: 438 DAVTYNALLGGY--GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           DA TYN L+ G    ++ + +    +   ++     P+ +TY+ L     K G    A++
Sbjct: 540 DATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVK 599

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +  E    G  ADVV Y+AL   LC  G V+ AVSL  EM ++G  P+   Y  II+   
Sbjct: 600 MLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLI 659

Query: 556 RSATTECTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
           +    E      +  +GK ++      +A + A+C   + D +   R ++ + +  G+LV
Sbjct: 660 KVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVD-EAFHRFESMLAR--GELV 716

Query: 610 AE-KAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
                        C+  ++   L +F+ M      P  VT +++ +   R    E A  L
Sbjct: 717 GSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQEL 776

Query: 668 LEEL 671
           L+E+
Sbjct: 777 LQEM 780



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 176/413 (42%), Gaps = 56/413 (13%)

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   D+FTYN L++ +         + I  EM    I+PN  +++ +I  +A+  R DDA
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG-IRKDAVTYNALLG 447
           +  F  MK      D  ++  ++    K G  E+A  V  EM + G +  D   + A++ 
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
              K  +  E R +F QM+     P+ + Y+T+ID  +K G  +EA+++           
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
             V Y  L+++LCK G +E A  L   M   G RPN V Y S+I  F +S          
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKS---------- 343

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTD--NQIIKVFGQLVAEKAGQGKKENRCRQE 625
               G+ KE+      CS  D+ V+   R D     + + G   +    Q  K       
Sbjct: 344 ----GRMKEA------CSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKS------ 387

Query: 626 ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG- 684
                  F++M +   KPNVVT++ I+   S+     +A  +++ +         +AHG 
Sbjct: 388 -------FEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM---------IAHGC 431

Query: 685 ---------LLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
                    LL G+ +     +A  L DE+    SS     Y++L + L   G
Sbjct: 432 FPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGG 484



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 130/292 (44%), Gaps = 2/292 (0%)

Query: 233 ALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDML 291
           ++I    ++G   EA  +F  M     KP+  TYN +I+  C       +    +  D+ 
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
           + G  PD +T+  L     + G  + A  +  E   RG + D+  Y  L   +C   Q+D
Sbjct: 571 KVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVD 630

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A  +  EM  +  +P+   Y  +I+G  K  +L+DA   F EM   G      +Y  ++
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALV 690

Query: 412 SIYAKLGRFEEALLVCKEMESSG-IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
                 G  +EA    + M + G +    + Y+AL+ G+ K  K D   ++FE M +   
Sbjct: 691 QALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            P  +T ++L D   + G  ++A ++ +E    G       ++A++D L K+
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS 802



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/291 (19%), Positives = 115/291 (39%), Gaps = 60/291 (20%)

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           E +G + D  TYN L+     +  Y +   + E+M    ++PN  +++ LI  +++    
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT-------------- 536
            +A+  F   K+   K D+  +  L+D LCK G+ E A  +  EM               
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 537 ----------------------KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
                                 K G  P+ + YN++ID   ++   +  +  ++  L K 
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 575 KESAN------LDAMCSQDDKDVQE--------AGRTDNQIIKVFGQLVAEKAGQGKKEN 620
                      ++++C     +  E        +G   N +I  +  L+   A  G+ + 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVI--YTSLIHGFAKSGRMKE 348

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            C         +F +M +   +P+V+T + +++   +  +FE A+   EE+
Sbjct: 349 AC--------SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 231/496 (46%), Gaps = 37/496 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S MI+   R  K+ LA +     +  GY      FS LI+     G   EA+ + + M  
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              KP L+T NA+++  C  G V     V + D M+  G QP+ +T+  +L V  + G  
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKV--SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  L  +M  R I  D   Y+ ++D +CK   +D AF +  EM  K    +++ Y+T+
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G+  AGR DD   +  +M    I  D V+++ ++  + K G+  EA  + KEM   GI
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VTY +L+ G+ K+ + D+   M + M +    PN+ T++ LI+ Y K  L  + ++
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +FR+    G+ AD V Y+ LI   C+ G +E A  L  EM    +RP++V+Y  ++D   
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468

Query: 556 RSATTECTVDDVER--------DLG-----------KQKESANLDAMCSQDDKDVQEAGR 596
            +   E  ++  E+        D+G             K     D  CS   K V+   +
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
           T N +I           G  KK +    ++L     F+KM +    PN  T++ ++ A  
Sbjct: 529 TYNIMI----------GGLCKKGSLSEADLL-----FRKMEEDGHSPNGCTYNILIRAHL 573

Query: 657 RCNSFEDASMLLEELR 672
                  ++ L+EE++
Sbjct: 574 GEGDATKSAKLIEEIK 589



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 208/456 (45%), Gaps = 64/456 (14%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           Y  +L+ +   G+ + A++      K EERK     +  S +I  L + G +D A N+F 
Sbjct: 215 YGPVLKVMCKSGQTALAMELLR---KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
               +G+   +  ++ LI  +  +G   +   +   M +  + P++V ++A+ID   K G
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              +   E+  +M++ G+ PD +T+ SL+    +    + A ++ + MV +G   +I T+
Sbjct: 332 -KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF 390

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L++  CK   +D   E+  +M  + +  + VTY+T+I G+ + G+L+ A  +F EM  
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS------------------------ 433
             +  D VSY  +L      G  E+AL + +++E S                        
Sbjct: 451 RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510

Query: 434 -----------GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
                      G++ D  TYN ++GG  K+G   E   +F +M+ D  SPN  TY+ LI 
Sbjct: 511 AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIR 570

Query: 483 VYSKGGLYKEAMQIFREFKQAG------------------LKA----DVVLYSALIDALC 520
            +   G   ++ ++  E K+ G                  LKA    DV  ++ L+   C
Sbjct: 571 AHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFC 630

Query: 521 --KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             +N  V  A +L   M   G +PNVVTYN++I   
Sbjct: 631 LEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGL 666



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 146/281 (51%), Gaps = 2/281 (0%)

Query: 276 GGVDFKH--VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G VD K    V++F +M R+  +P  I F+ L +V +R   ++   +L  +M  +GI  +
Sbjct: 47  GIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHN 106

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++T + +++  C+  ++ LAF  M ++      P+ VT+ST+I+G    GR+ +AL +  
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD 166

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M  +G     ++ N +++     G+  +A+L+   M  +G + + VTY  +L    K G
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           +      +  +M+   +  + + YS +ID   K G    A  +F E +  G KAD+++Y+
Sbjct: 227 QTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYT 286

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            LI   C  G  +    LL +M K  I P+VV ++++ID F
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/450 (22%), Positives = 185/450 (41%), Gaps = 72/450 (16%)

Query: 157 DDYTFLLRELGNRG------EWSKAIQCFAFAVKREERKNDQGKLA-----------SAM 199
           DD   LLR++  R        +S  I CF    K  E +    ++            +++
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I    +  ++D A ++ +  +++G G  +  F+ LI+ Y ++    + + +F  M    +
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 260 KPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG----- 312
             + VTYN +I   C  G ++     E+F +M+   V+PD +++  LL  +C  G     
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAK--ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476

Query: 313 ------------------------GLWEAAR-----NLFNEMVHRGIDQDIFTYNTLLDA 343
                                   G+  A++     +LF  +  +G+  D+ TYN ++  
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +CK   +  A  +  +M     SPN  TY+ +I  +   G    +  +  E+K  G  +D
Sbjct: 537 LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG--KQGKYDEVRRM 461
             +    LS  A+             M  +G   D  T+  LL  +   +     +   +
Sbjct: 597 ASTLRFALSTLAR-------------MLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTL 643

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F+ MKA    PN++TY+T+I     G +  +   +  +  + G + + V  S  I  LCK
Sbjct: 644 FKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCK 703

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             L  SA+ LL +M  E    +V T   I+
Sbjct: 704 QDLHGSAILLLRKM--ENDNEDVTTKKKIL 731


>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
 gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
          Length = 674

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 149/556 (26%), Positives = 265/556 (47%), Gaps = 45/556 (8%)

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
           +R T+N +L +   G   E +  L  EM  RGI  D +T++TL++   +  Q + A +  
Sbjct: 142 NRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWF 201

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
             M ++ I P+ VTY+++ID Y + GR+++A+ ++ ++K +   LD V+Y  + ++YA+ 
Sbjct: 202 ERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARA 261

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G ++  + + +EM  SG   +AV  N L+G   K GK ++ +++F +M+   VSP  +T 
Sbjct: 262 GDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTL 321

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           S L+++Y++ G Y +A +++   K  G K DV +Y++L+ A  + G VE A  +L EM +
Sbjct: 322 SILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKR 381

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
            G  P+ +TY + ++ +     T+  VD   R                  DK V   G+ 
Sbjct: 382 AGCNPDHLTYRTAMNTYA----TKGMVDPARRMF----------------DKVVALNGKP 421

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
           D  +  V  +   + AG+ ++ ++          +F +M +          S +L +C  
Sbjct: 422 DTPLFTVMIR-ACKLAGEIEQASK----------IFDEMMESGCCSPDERVSGMLLSCMA 470

Query: 658 CNSFEDASM-LLEELRLFDNQVYGVAHGLLMG----YRDNIWVQALSLFDEVKLMDSSTA 712
               +D  + +L+ L  F+  ++ +   ++       RD +         +    DS   
Sbjct: 471 MAKNDDERLAILDCLDKFNAPLHELMSAIVRKEEPRSRDEVAEMVEKFISDYPETDSR-- 528

Query: 713 SAFYNALTDMLWHFGQKRGAQLV----VLEGKRRQVWENVWSESCLDLHLMSSGAARAMV 768
               N L D+    G K  A  +    V  G    +  N+ S   L+L  +S  AA   +
Sbjct: 529 KPLCNCLIDICSSVGMKHAAHKIFAMGVAVGAYDGLQTNLPSLWRLNLRTLSMPAAECAI 588

Query: 769 HAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCN 828
            AW+ ++ + V EG ELP+ L I TG G   +V     L   V  LL  +GAPF      
Sbjct: 589 EAWVSSLKAAVREGDELPEDLIIETGVG---RVRSGQRLNPIVGTLLKKLGAPFTENTEP 645

Query: 829 LGRFISTGPMVASWLR 844
            G + STG  V +W++
Sbjct: 646 AGYYCSTGAAVEAWIK 661



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 171/351 (48%), Gaps = 3/351 (0%)

Query: 191 DQGKLASAMISILGRLGKVDLAKNIFE--TALNEGYGNTVYAFSALISAYGRSGYCQEAI 248
           D+   A  ++++L  + + + A   FE   A  E Y    Y ++ ++         + + 
Sbjct: 104 DKSLSAKNIVTVLNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSE 163

Query: 249 SVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
            +   M    ++P+  T++ +I+ C K     +  ++ F+ M   G+ PD +T+NS++ +
Sbjct: 164 KLVEEMTGRGIQPDNYTFSTLIN-CAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDM 222

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
             R G    A  L+ ++       D  TY  + +   +        +++ EM     SPN
Sbjct: 223 YGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPN 282

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
            V  +T++   +KAG+++ A  +F+EM+  G+    V+ + ++ +Y ++G +++A  V +
Sbjct: 283 AVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYE 342

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            +++ G + D   YN+L+    + G+ ++   + ++MK    +P+ LTY T ++ Y+  G
Sbjct: 343 TLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKG 402

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +   A ++F +      K D  L++ +I A    G +E A  + DEM + G
Sbjct: 403 MVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMESG 453



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 162/336 (48%), Gaps = 16/336 (4%)

Query: 233 ALISAYGRSGYCQEAISVFNSMKRYN----------LKPNLV-----TYNAVIDACGKGG 277
           A + ++ +S   +  ++V N++ R+            +P L      TYN ++    + G
Sbjct: 98  AALESWDKSLSAKNIVTVLNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKIL-RNG 156

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              +   ++ ++M   G+QPD  TF++L+    R    E A   F  M   GI  D  TY
Sbjct: 157 RQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTY 216

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N+++D   +  +++ A E+  ++ + N   + VTY  + + YA+AG     + +  EM+ 
Sbjct: 217 NSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRD 276

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   + V  NT++   +K G+  +A  V  EM +SG+    VT + L+  Y + G YD+
Sbjct: 277 SGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQ 336

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              ++E +K +    ++  Y++L+    +GG  ++A  I +E K+AG   D + Y   ++
Sbjct: 337 AFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMN 396

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
                G+V+ A  + D++     +P+   +  +I A
Sbjct: 397 TYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRA 432



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 99/190 (52%), Gaps = 4/190 (2%)

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           N+VT    I+ + KA    + L    E+      ++R +YN +L I     + E +  + 
Sbjct: 111 NIVTVLNNINRWEKALAFFEWLKARPEL----YEINRYTYNVMLKILRNGRQLELSEKLV 166

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           +EM   GI+ D  T++ L+    +  + +E  + FE+MK++ + P+ +TY+++ID+Y + 
Sbjct: 167 EEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRV 226

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G   EA++++ + K    K D V Y A+ +   + G  +S + L+ EM   G  PN V  
Sbjct: 227 GRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIM 286

Query: 548 NSIIDAFGRS 557
           N+++    ++
Sbjct: 287 NTLMGTLSKA 296


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 151/550 (27%), Positives = 258/550 (46%), Gaps = 71/550 (12%)

Query: 192 QGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF 251
           +    S +++ + + G +  A  + E  +N G    +   ++L+  Y   G    A+++F
Sbjct: 290 EATFTSVIVACVAQ-GNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLF 348

Query: 252 NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
           N +    L PN VTY+ +I+ C   G + +   E++  M  NG+ P     NSLL    +
Sbjct: 349 NKITEDGLFPNKVTYSVLIEGCCNSG-NIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 407

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD-------------------- 351
             LWE A  LF+E V  G+  +IFTYN ++  +CKG +MD                    
Sbjct: 408 APLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVS 466

Query: 352 ---------------LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
                          +A  + ++M A+++ PNVVTYS +IDG  K G  + AL++F +M 
Sbjct: 467 YNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQML 526

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
            L I     ++NT+++   K+G+  EA    K     G     +TYN+++ G+ K+G  D
Sbjct: 527 SLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNID 586

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
               ++ +M    VSPN++TY++LI+ + K      A++   E ++ GL+ DV  YSALI
Sbjct: 587 SALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALI 646

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
           D  CK   +ESA  L  E+ + G+ PN + YNS+I  F              RDL     
Sbjct: 647 DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF--------------RDLN---- 688

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
             N++A      K + +    D   +  +  L+     +G+        ++    ++ +M
Sbjct: 689 --NMEAALVWYKKMINDRIPCD---LGTYTTLIDGLLKEGR--------LVFASDLYMEM 735

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL-RLFDNQVYGVAHGLLMGY-RDNIW 694
               I P+++TF  ++N        E+A  +LEE+ R        + + L+ GY R+   
Sbjct: 736 LSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNL 795

Query: 695 VQALSLFDEV 704
            +A +L DE+
Sbjct: 796 KEAFTLHDEM 805



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 228/485 (47%), Gaps = 47/485 (9%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            F+ L++AY R+   + AI  FN+M   ++ P +   N ++ A  +  +    + ++++ 
Sbjct: 152 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNM-IGELRDLYNK 210

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M+  G+  D  T + ++  C + G  E A   F E   RG+  D   Y+ ++ A+CK   
Sbjct: 211 MVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPN 270

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            +L  E++ EM  +   P+  T++++I      G + +AL +  EM   G  ++ V   +
Sbjct: 271 SNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATS 330

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++  Y   G  + AL +  ++   G+  + VTY+ L+ G    G  ++   ++ QMK + 
Sbjct: 331 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 390

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + P++   ++L+  Y K  L++EA ++F E    G+ A++  Y+ ++  LCK G ++ A 
Sbjct: 391 IPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEAC 449

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT----VDDVERDL-------------- 571
           SLLD M  +G+ PNVV+YN +I    R    +       D + RDL              
Sbjct: 450 SLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGN 509

Query: 572 ---GKQKESANL-DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
              G  +++ +L D M S    ++     T N II    ++      + K +N   +  +
Sbjct: 510 FKKGDSEKALDLFDQMLSL---NIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFI 566

Query: 628 --CI------------------LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
             C+                  L V+++M +  + PNVVT+++++N   + N  + A   
Sbjct: 567 PSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKT 626

Query: 668 LEELR 672
            +E+R
Sbjct: 627 RDEMR 631



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 171/352 (48%), Gaps = 7/352 (1%)

Query: 169 RGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK--NIFETALNEGYGN 226
           +G    A   F+  + R+ + N    + +  I I G   K D  K  ++F+  L+     
Sbjct: 477 KGNMDMASSVFSDMLARDLKPN----VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAP 532

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           T + F+ +I+   + G   EA     +       P+ +TYN+++D   K G +    + +
Sbjct: 533 TDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEG-NIDSALAV 591

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           + +M   GV P+ +T+ SL+    +    + A    +EM  +G++ D+  Y+ L+D  CK
Sbjct: 592 YREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCK 651

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              M+ A ++  E+    +SPN + Y++MI G+     ++ AL  + +M    I  D  +
Sbjct: 652 RRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGT 711

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T++    K GR   A  +  EM S GI  D +T++ L+ G   +G+ +  R++ E+M 
Sbjct: 712 YTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMD 771

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
              ++P++L Y+TLI  Y + G  KEA  +  E    GL  D V Y  LI+ 
Sbjct: 772 RKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 155/293 (52%), Gaps = 5/293 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L ++G++  A++  +  L EG+  +   +++++  + + G    A++V+  M  
Sbjct: 538 NTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCE 597

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
           + + PN+VTY ++I+  C    +D    ++  D+M   G++ D   +++L+   C R  +
Sbjct: 598 FGVSPNVVTYTSLINGFCKSNRIDL--ALKTRDEMREKGLELDVTAYSALIDGFCKRRDM 655

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E+A++LF E++  G+  +   YN+++        M+ A     +M    I  ++ TY+T
Sbjct: 656 -ESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTT 714

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDG  K GRL  A +++ EM   GI  D ++++ +++     G+ E A  + +EM+   
Sbjct: 715 LIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKN 774

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           +    + YN L+ GY ++G   E   + ++M    + P+ +TY  LI+   KG
Sbjct: 775 MTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKG 827



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 100/506 (19%), Positives = 225/506 (44%), Gaps = 35/506 (6%)

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +D  +F Y  LL+A  +  +++ A +    M  +++ P V   + ++    +   + +  
Sbjct: 148 LDHRVFNY--LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELR 205

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
           +++++M   GI  D  + + ++    K GR EEA    +E +  G++ DA  Y+ ++   
Sbjct: 206 DLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAV 265

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            K+   +    + E+MK     P+  T++++I      G   EA+++  E    G   ++
Sbjct: 266 CKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNL 325

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           V+ ++L+   C  G ++SA++L +++T++G+ PN VTY+ +I+    S   E    ++  
Sbjct: 326 VVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIE-KASELYT 384

Query: 570 DL---GKQKESANLDAMC---------SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
            +   G      N++++           +  K   EA       I  +  +++     GK
Sbjct: 385 QMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGK 444

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQ 677
            +  C         +   M    + PNVV+++ ++    R  + + AS +  ++   D +
Sbjct: 445 MDEAC--------SLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLK 496

Query: 678 VYGVAHGLLM--GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLV 735
              V + +L+   ++     +AL LFD++  ++ +     +N + + L   GQ   A+  
Sbjct: 497 PNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEAR-- 554

Query: 736 VLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLL---SIL 792
               K +   E  +  SC+  + +  G  +       L ++  + E    P ++   S++
Sbjct: 555 ---DKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLI 611

Query: 793 TGWGKHSKVVGDGALRRAVEVLLTGM 818
            G+ K +++  D AL+   E+   G+
Sbjct: 612 NGFCKSNRI--DLALKTRDEMREKGL 635



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 3/189 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+I    +   ++ A+++F   L  G       ++++IS +      + A+  +  M  
Sbjct: 643 SALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIN 702

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             +  +L TY  +ID   K G       +++ +ML  G+ PD ITF+ L+  +C++G L 
Sbjct: 703 DRIPCDLGTYTTLIDGLLKEG-RLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQL- 760

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E AR +  EM  + +   +  YNTL+    +   +  AF +  EM  + + P+ VTY  +
Sbjct: 761 ENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDIL 820

Query: 376 IDGYAKAGR 384
           I+G  K  R
Sbjct: 821 INGKFKGDR 829


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 199/390 (51%), Gaps = 36/390 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L ++G+   A  +F+  + +G    VY ++ +I+   + G    A  +   M+ 
Sbjct: 167 TTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEE 226

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +PN+VTY+ +ID+  +  +     ++IF  M   G+ PD  T+ SL+    +   W+
Sbjct: 227 AGCQPNMVTYSTLIDSLCRDRL-VNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWK 285

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM- 375
            A  L NEM    I  DI T+N L+D  CK  ++  A  ++  M    + PNVVTYS++ 
Sbjct: 286 EASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLM 345

Query: 376 ----------------------------------IDGYAKAGRLDDALNMFSEMKFLGIG 401
                                             I+GY KA R+D+A+ +F+EM   G+ 
Sbjct: 346 YGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLT 405

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + VSYNT++  + +LG+  EA  + + M ++G   D  TY+ LL G+ KQG   +  R+
Sbjct: 406 PNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRL 465

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F  M++  + PNL+ Y+ L+    K G +K+A ++F E    GL+  V LY+ +I+ LCK
Sbjct: 466 FRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCK 525

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            GL++ A+     M  +G  P+ ++YN II
Sbjct: 526 EGLLDEALEAFRNMEADGCPPDEISYNVII 555



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 176/336 (52%), Gaps = 1/336 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    +Y  S  ++ + +        SV   + +  L+P +VT+  +I+   K G +F  
Sbjct: 123 GLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVG-EFAQ 181

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            VE+FDDM+  G QPD  T+N+++    + G   AA  L  +M   G   ++ TY+TL+D
Sbjct: 182 AVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLID 241

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           ++C+   ++ A +I + M AK ISP++ TY+++I G  K  R  +A  + +EM  L I  
Sbjct: 242 SLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMP 301

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D V++N ++  + K G+  EAL V K M   G+  + VTY++L+ GY       E R++F
Sbjct: 302 DIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLF 361

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
             M      PN+ +Y+ LI+ Y K     EAMQ+F E    GL  + V Y+ LI   C+ 
Sbjct: 362 HVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQL 421

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           G +  A  L   M   G  P++ TY+ ++D F +  
Sbjct: 422 GKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQG 457



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 201/395 (50%), Gaps = 36/395 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S  ++   +L +VDL  ++    +  G   T+  F+ LI+   + G   +A+ +F+ M  
Sbjct: 132 SIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVA 191

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +P++ TYN +I+   K G +      +   M   G QP+ +T+++L+    R  L  
Sbjct: 192 KGCQPDVYTYNTIINGLCKIG-ETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVN 250

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A ++F+ M  +GI  DIFTY +L+  +CK ++   A  ++ EM + NI P++VT++ ++
Sbjct: 251 EALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLV 310

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRV------------------------------- 405
           D + K G++ +AL +   M  +G+  + V                               
Sbjct: 311 DTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCK 370

Query: 406 ----SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
               SYN +++ Y K  R +EA+ +  EM   G+  + V+YN L+ G+ + GK  E + +
Sbjct: 371 PNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDL 430

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F  M  +   P+L TYS L+D + K G   +A ++FR  +   LK ++V+Y+ L+ A+CK
Sbjct: 431 FRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCK 490

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           +G  + A  L  E+  +G++P+V  Y +II+   +
Sbjct: 491 SGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCK 525



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 209/403 (51%), Gaps = 21/403 (5%)

Query: 152 KLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLG 207
           K C  D YT+  ++  L   GE + A    A  +K+ E    Q  +   S +I  L R  
Sbjct: 192 KGCQPDVYTYNTIINGLCKIGETAAA----AGLLKKMEEAGCQPNMVTYSTLIDSLCRDR 247

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
            V+ A +IF     +G    ++ +++LI    +    +EA ++ N M   N+ P++VT+N
Sbjct: 248 LVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFN 307

Query: 268 AVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE---AARNLFN 323
            ++D  C +G V     + +   M   GV+P+ +T++SL+   S   LW     AR LF+
Sbjct: 308 VLVDTFCKEGKVS--EALGVLKTMTEMGVEPNVVTYSSLMYGYS---LWTDVVEARKLFH 362

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
            M+ +G   +IF+YN L++  CK  ++D A ++  EM  + ++PN V+Y+T+I G+ + G
Sbjct: 363 VMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLG 422

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           +L +A ++F  M   G   D  +Y+ +L  + K G   +A  + + M+S+ ++ + V Y 
Sbjct: 423 KLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYT 482

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+    K G + + R++F ++    + P++  Y+T+I+   K GL  EA++ FR  +  
Sbjct: 483 ILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEAD 542

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG----IRP 542
           G   D + Y+ +I  L ++     A+ L+ EM   G    +RP
Sbjct: 543 GCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVRP 585



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 231/517 (44%), Gaps = 55/517 (10%)

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           F+ ML     P  I F  LL A+   G  ++   +L  +M   G+  +I+T +  ++  C
Sbjct: 80  FNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFC 139

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           +  ++DL F ++A++    + P +VT++T+I+G  K G    A+ +F +M   G   D  
Sbjct: 140 QLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVY 199

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +YNT+++   K+G    A  + K+ME +G + + VTY+ L+    +    +E   +F  M
Sbjct: 200 TYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYM 259

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           KA  +SP++ TY++LI    K   +KEA  +  E     +  D+V ++ L+D  CK G V
Sbjct: 260 KAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKV 319

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSII-------------DAFGRSATTECTVDDVERDL- 571
             A+ +L  MT+ G+ PNVVTY+S++               F    T  C  +    ++ 
Sbjct: 320 SEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNIL 379

Query: 572 --GKQKESANLDAMCSQDDKDVQEAGRTDNQI-----IKVFGQLVAEKAGQGKKENRCRQ 624
             G  K     +AM  Q   ++   G T N +     I  F QL   +  Q    N C  
Sbjct: 380 INGYCKAKRIDEAM--QLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTN 437

Query: 625 EIL-------------CILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
             L             C  G       +F+ M    +KPN+V ++ +++A  +  + +DA
Sbjct: 438 GNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDA 497

Query: 665 SMLLEELRLFDNQVY-----GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
             L  EL +   Q +      + +GL    ++ +  +AL  F  ++          YN +
Sbjct: 498 RKLFSELFVQGLQPHVQLYTTIINGLC---KEGLLDEALEAFRNMEADGCPPDEISYNVI 554

Query: 720 TDMLWHFGQKRGAQLVVLEGKRRQVWENV---WSESC 753
              L     +  A L+V E + R    +V    SE C
Sbjct: 555 IRGLLQHKDESRALLLVGEMRDRGFIADVRPCLSEVC 591



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 171/380 (45%), Gaps = 27/380 (7%)

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL-VCKE 429
           TY    D  +    +DDAL  F+ M         + +  +LS   K+G++ + ++ + K+
Sbjct: 59  TYQHKNDASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQ 118

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           ME  G+  +  T +  +  + +  + D    +  ++    + P ++T++TLI+   K G 
Sbjct: 119 MELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGE 178

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
           + +A+++F +    G + DV  Y+ +I+ LCK G   +A  LL +M + G +PN+VTY++
Sbjct: 179 FAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYST 238

Query: 550 IIDAFGRSATTECTVDDVERDLGKQ------KESANLDAMCSQDDKDVQEAGRTDNQI-- 601
           +ID+  R       +D       K         ++ +  +C       +EA    N++  
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRW--KEASALLNEMTS 296

Query: 602 ------IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
                 I  F  LV     +GK            LGV + M ++ ++PNVVT+S+++   
Sbjct: 297 LNIMPDIVTFNVLVDTFCKEGKVSEA--------LGVLKTMTEMGVEPNVVTYSSLMYGY 348

Query: 656 SRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GYRDNIWV-QALSLFDEVKLMDSSTAS 713
           S      +A  L   +     +    ++ +L+ GY     + +A+ LF+E+     +  +
Sbjct: 349 SLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNN 408

Query: 714 AFYNALTDMLWHFGQKRGAQ 733
             YN L       G+ R AQ
Sbjct: 409 VSYNTLIHGFCQLGKLREAQ 428


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 191/360 (53%), Gaps = 1/360 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L ++GK   A  +F+  +  G    VY ++ +I+   + G    A  +   M+ 
Sbjct: 172 TTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEE 231

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +PN+VTY+ +ID+  K        ++IF  M   G+ PD  T+NSL+        W+
Sbjct: 232 AGCQPNVVTYSTIIDSHRKDR-RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWK 290

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L NEM    I  DI T+N L+D ICK  ++  A  ++  M    + P+VVTYS+++
Sbjct: 291 EASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLM 350

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            GY+    + +A  +F  M   G   D  SYN +++ Y K+ R +EA  +  EM   G+ 
Sbjct: 351 YGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLT 410

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + V+YN L+ G  + G   E R +F+ M  +   PNL TYS L+D + K G + +A ++
Sbjct: 411 PNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRL 470

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           FR  +    K ++V+Y+ LIDA+CK+G +  A  L  E+  +G++PN   Y +II+   +
Sbjct: 471 FRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCK 530



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 249/521 (47%), Gaps = 54/521 (10%)

Query: 228 VYAFSALISAYGRSG-YCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV--- 283
           +  F+ L+SA  + G Y    IS+   M+   L PN+ T + +I+        F H+   
Sbjct: 97  IIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINC-------FSHLQRV 149

Query: 284 ---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
                +   +++ G+QP  +TF +L+    + G +  A  LF++MV RG   D++TY T+
Sbjct: 150 DLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTI 209

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           ++ +CK  +   A  ++ +M      PNVVTYST+ID + K  R+++AL++FS MK  GI
Sbjct: 210 INGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGI 269

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D  +YN+++       +++EA  +  EM S  I  D VT+N L+    K+GK  E + 
Sbjct: 270 SPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQG 329

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + + M    V P+++TYS+L+  YS      EA ++F      G K DV  Y+ LI+  C
Sbjct: 330 VLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYC 389

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           K   ++ A  L +EM  +G+ PN V+YN++I    +              LG  +E+ NL
Sbjct: 390 KVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQ--------------LGSLREARNL 435

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
                   K++   G   N  +  +  L+     QG      R        +F+ M    
Sbjct: 436 -------FKNMHTNGNLPN--LFTYSILLDGFCKQGYFGKAFR--------LFRAMQSTY 478

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVY-GVAHGLLMGYRDNIWV 695
            KPN+V ++ +++A  +  +  DA  L  EL +     + Q+Y  + +GL    ++ +  
Sbjct: 479 SKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLC---KEGLLD 535

Query: 696 QALSLFDEVKLMDSSTASAFYNALT-DMLWHFGQKRGAQLV 735
           +AL  F  ++          YN +    L H  + R  QL+
Sbjct: 536 EALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLI 576



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 175/336 (52%), Gaps = 1/336 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    +Y  S LI+ +        A SV   + +  L+P +VT+  +I+   K G  F  
Sbjct: 128 GLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVG-KFAQ 186

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            +E+FDDM+  G +PD  T+ +++    + G   AA  L  +M   G   ++ TY+T++D
Sbjct: 187 AMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIID 246

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           +  K  +++ A +I + M  K ISP++ TY+++I G     +  +A  + +EM+ L I  
Sbjct: 247 SHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMP 306

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D V++N ++    K G+  EA  V K M   G+  D VTY++L+ GY  + +  E R++F
Sbjct: 307 DIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLF 366

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           + M      P++ +Y+ LI+ Y K     EA Q+F E    GL  + V Y+ LI  LC+ 
Sbjct: 367 DAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQL 426

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           G +  A +L   M   G  PN+ TY+ ++D F +  
Sbjct: 427 GSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQG 462



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 202/398 (50%), Gaps = 11/398 (2%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKV 209
           C  D YT+  ++  L   GE + A    A  +K+ E    Q  +   S +I    +  +V
Sbjct: 199 CRPDVYTYTTIINGLCKIGETAAA----AGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRV 254

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
           + A +IF     +G    ++ +++LI         +EA ++ N M+  N+ P++VT+N +
Sbjct: 255 NEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVL 314

Query: 270 IDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           +D  C +G V       +   M   GV+PD +T++SL+   S       AR LF+ M+ +
Sbjct: 315 VDTICKEGKVS--EAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   D+F+YN L++  CK  ++D A ++  EM  + ++PN V+Y+T+I G  + G L +A
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA 432

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            N+F  M   G   +  +Y+ +L  + K G F +A  + + M+S+  + + V YN L+  
Sbjct: 433 RNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDA 492

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             K G   + R++F ++    + PN   Y+T+I+   K GL  EA++ FR  ++ G   D
Sbjct: 493 MCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPD 552

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            + Y+ +I     +     AV L+ EM  +G   +V T
Sbjct: 553 EISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 199/416 (47%), Gaps = 25/416 (6%)

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRG 329
           DAC    +D    +  F+ ML     P  I F  LL A+   G  ++   +L  +M   G
Sbjct: 71  DACSFRNID--DALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAG 128

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  +I+T + L++      ++DLAF ++A++    + P +VT++T+I+   K G+   A+
Sbjct: 129 LSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAM 188

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            +F +M   G   D  +Y T+++   K+G    A  + K+ME +G + + VTY+ ++  +
Sbjct: 189 ELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSH 248

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            K  + +E   +F  MK   +SP++ TY++LI        +KEA  +  E +   +  D+
Sbjct: 249 RKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDI 308

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           V ++ L+D +CK G V  A  +L  MT+ G+ P+VVTY+S++  +G S  +E     VE 
Sbjct: 309 VTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLM--YGYSLRSEV----VE- 361

Query: 570 DLGKQKESANLDAMCSQD--DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
              ++   A +   C  D    ++   G    + I    QL  E   QG   N      L
Sbjct: 362 --ARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTL 419

Query: 628 ----CILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
               C LG       +F+ MH     PN+ T+S +L+   +   F  A  L   ++
Sbjct: 420 IHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQ 475


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 232/492 (47%), Gaps = 30/492 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +IS   R GK+  A  +F+    +G         +++     +G C +A+  F  M +
Sbjct: 165 STLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK 224

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+ VTYN +I+   K        + + ++M+ NG  P+  ++N++L    +    E
Sbjct: 225 -TCPPDSVTYNTMINGLSKSD-RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVE 282

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L  +MV RG   D+ +Y T+++ +CK  Q+D A  +M +M  +   PNV+TY T++
Sbjct: 283 NALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLV 342

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG+ + G LD A+ +  +M   G   + ++YN ++ ++ +    E A  V + M  +G  
Sbjct: 343 DGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCP 402

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            DA+ Y+ ++ G+ K GK  E   + EQM      P++   STLID   K      A ++
Sbjct: 403 PDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQEL 462

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            R         DVV YS LI ALCK   +  A S LD M K    P+VVTYNS++D   +
Sbjct: 463 LRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCK 522

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
           S      ++D      + + +  +  + +     V  +   DN +   F  L      + 
Sbjct: 523 SRR----INDAFLLFDRMRAAGVMPDVVTY--SIVIHSFCKDNNLDSAFKML------ER 570

Query: 617 KKENRCRQEI---------LCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNS 660
            KE +C  ++         LC  G       VFQ+M      PN+VT++ +++   + N 
Sbjct: 571 MKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINK 630

Query: 661 FEDASMLLEELR 672
            E A+ +LE +R
Sbjct: 631 VEQAAEMLEIMR 642



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/383 (32%), Positives = 205/383 (53%), Gaps = 8/383 (2%)

Query: 179  FAFAVKREERKNDQGKLASAMIS-ILGRLGKVDLAKNIFETALN-EGYGNTVYAFSALIS 236
            FA+       +   GKL + ++  +L  +   D A   F+ A + EGY +  Y  + L+ 
Sbjct: 793  FAWEYAETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQ 852

Query: 237  AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQ 296
            A  R    ++A+ V+ +  +    PN+ T+  +I    + G D     E+  +M R+GV 
Sbjct: 853  ALLRLKRPKDALQVYRN--KLCCSPNMFTFTILIHGLCRAG-DIGTAYELLKEMPRHGVP 909

Query: 297  PDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAF 354
             + I  N ++  +CS   L ++A  LF EM   G    D+FTY+T++D++ K  ++D A 
Sbjct: 910  QNVILHNVVIKGLCSARKL-DSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDAC 968

Query: 355  EIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY 414
             ++ +M +K  SPNVVTYS+++ G  KAG+LD+A  +   M   G   + V+YNT++  +
Sbjct: 969  RLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGH 1028

Query: 415  AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
             KLGR +EA  + +EM   G + + VTY  LL  + K GK ++   + E M      PNL
Sbjct: 1029 CKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNL 1088

Query: 475  LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
             TY++L+D++ K    + A Q+     Q G   +VV Y+ +I  LCK   V   V LL++
Sbjct: 1089 FTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQ 1148

Query: 535  MTKEGIRPNVVTYNSIIDAFGRS 557
            M      P++VT+N+IIDA  ++
Sbjct: 1149 MLSNNCVPDIVTFNTIIDAMCKT 1171



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 184/356 (51%), Gaps = 2/356 (0%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            + ++    + GK + A  + E  + +GY   ++ +++L+  + +    + A  + +SM +
Sbjct: 1057 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQ 1116

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                PN+V+YN VI    K        V + + ML N   PD +TFN+++    +    +
Sbjct: 1117 KGCVPNVVSYNTVIAGLCKA-TKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVD 1175

Query: 317  AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN-ISPNVVTYSTM 375
             A  LFN +   G   ++ TYN+L+  +CK  + D A  ++ EM  K   SP+++TY+T+
Sbjct: 1176 IAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 1235

Query: 376  IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
            IDG  K+ R+D A  +F +M   G+  D V+Y+ V+S   K    +EA  V + M  +G 
Sbjct: 1236 IDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGF 1295

Query: 436  RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
               A+TY  L+ G+ K G  D+   + + + +    P+++T+S  ID  SK G  ++A +
Sbjct: 1296 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 1355

Query: 496  IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            +     +AGL  D V Y+ L+   C   L E AV L + M + G  P+  TY +++
Sbjct: 1356 LLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 195/401 (48%), Gaps = 38/401 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L +L +VD A  + +  +  G    V  +  L+  + R G    A+ +   M  
Sbjct: 304 TTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE 363

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              +PN +TYN ++   C +  ++  H  ++   M++ G  PD I ++++++   + G  
Sbjct: 364 RGYRPNAITYNNIMHVFCRRNDMERAH--QVLQMMIQTGCPPDAINYSTIISGFCKAGKL 421

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM------------------ 357
             A +L  +M+ RG   D+   +TL+DA+CK A +D A E++                  
Sbjct: 422 REAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSIL 481

Query: 358 ------------AE-----MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
                       AE     M      P+VVTY++++DG  K+ R++DA  +F  M+  G+
Sbjct: 482 IHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGV 541

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D V+Y+ V+  + K    + A  + + M+ +    D VTY+AL+ G  K G  D+   
Sbjct: 542 MPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFD 601

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F++M     +PNL+TY+TLID   K    ++A ++    ++     D + Y+ LI+ LC
Sbjct: 602 VFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLC 661

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
               +E A  +L EM  +G  P+ +TY +++ A  ++   E
Sbjct: 662 NASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLE 702



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 209/446 (46%), Gaps = 52/446 (11%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKN--DQGKLASAMISILGRLGKVDLAKNIFETA 219
           +LR L + G+ S A+  F     RE  K         + MI+ L +  ++D A  + E  
Sbjct: 202 ILRGLCDAGQCSDAVLHF-----REMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEM 256

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGV 278
           ++ G+   V++++ ++  + ++   + A+ +   M      P++V+Y  VI+  C    V
Sbjct: 257 VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQV 316

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           D      + D M++ G QP+ IT+ +L+    R G  + A  L  +M  RG   +  TYN
Sbjct: 317 D--EACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYN 374

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            ++   C+   M+ A +++  M      P+ + YST+I G+ KAG+L +A ++  +M   
Sbjct: 375 NIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRR 434

Query: 399 G-------------------------------IGL----DRVSYNTVLSIYAKLGRFEEA 423
           G                               IG+    D V+Y+ ++    K  R  EA
Sbjct: 435 GCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEA 494

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
                 M  +    D VTYN+++ G  K  + ++   +F++M+A  V P+++TYS +I  
Sbjct: 495 ESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHS 554

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           + K      A ++    K+A    DVV YSALI+ LCK G V+ A  +  EM   G  PN
Sbjct: 555 FCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPN 614

Query: 544 VVTYNSIIDAFGRSATTECTVDDVER 569
           +VTYN++ID         C ++ VE+
Sbjct: 615 LVTYNTLIDGL-------CKINKVEQ 633



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 211/421 (50%), Gaps = 43/421 (10%)

Query: 175  AIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSAL 234
            A+  F +A  +E   +D     + ++  L RL +   A  ++   L       ++ F+ L
Sbjct: 827  ALGFFDWATSQEGYNHDT-YTCNCLLQALLRLKRPKDALQVYRNKL--CCSPNMFTFTIL 883

Query: 235  ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRN 293
            I    R+G    A  +   M R+ +  N++ +N VI   C    +D    +E+F +M  +
Sbjct: 884  IHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLD--SALELFKEMEES 941

Query: 294  G-VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
            G   PD  T+++++    + G  + A  L  +MV +G   ++ TY++LL  +CK  ++D 
Sbjct: 942  GSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDE 1001

Query: 353  AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
            A  ++  M     SPN+VTY+T+IDG+ K GR+D+A ++  EM   G   + V+Y  +L 
Sbjct: 1002 ATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLD 1061

Query: 413  IYAKLGRFEEAL-----------------------LVCKEME--------SSGIRK---- 437
             + K G+ E+A+                       + CK+ E        SS I+K    
Sbjct: 1062 AFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP 1121

Query: 438  DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
            + V+YN ++ G  K  K  E   + EQM ++   P+++T++T+ID   K      A ++F
Sbjct: 1122 NVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELF 1181

Query: 498  REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT-KEGIRPNVVTYNSIIDAFGR 556
               +++G   ++V Y++L+  LCK+   + A  LL EMT K+G  P+++TYN++ID   +
Sbjct: 1182 NLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCK 1241

Query: 557  S 557
            S
Sbjct: 1242 S 1242



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 239/494 (48%), Gaps = 22/494 (4%)

Query: 192 QGKLASAMIS-ILGRLGKVDLAKNIFETA-LNEGYGNTVYAFSALISAYGRSGYCQEAIS 249
           +G+L+  ++  +L RL     A   FE A   +GY + ++  + L++   ++    +A  
Sbjct: 88  RGQLSPEIVGKVLQRLIDPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHD 147

Query: 250 VFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AV 308
           +F S        + VTY+ +I    + G       E+FD+M R G++       S+L  +
Sbjct: 148 LFRSRIEGQWGGDTVTYSTLISGFIRAG-KILPAYELFDEMNRKGLKAHAGVHKSILRGL 206

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
           C  G   +A  + F EM  +    D  TYNT+++ + K  ++D A  ++ EM     +PN
Sbjct: 207 CDAGQCSDAVLH-FREM-SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPN 264

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           V +Y+T++ G+ KA R+++AL +  +M   G   D VSY TV++   KL + +EA  V  
Sbjct: 265 VFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMD 324

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
           +M   G + + +TY  L+ G+ + G  D    +  +M      PN +TY+ ++ V+ +  
Sbjct: 325 KMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRN 384

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
             + A Q+ +   Q G   D + YS +I   CK G +  A  LL++M + G RP+V   +
Sbjct: 385 DMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLS 444

Query: 549 SIIDAFGRSATTECTVDDVERDLGKQ------KESANLDAMCSQDDKDVQEAGRTDNQII 602
           ++IDA  ++A  +   + +   +G          S  + A+C    K + EA    + ++
Sbjct: 445 TLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKA--KRLPEAESWLDVMV 502

Query: 603 K--VFGQLVAEKAGQGK--KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
           K   +  +V   +      K  R     L    +F +M    + P+VVT+S ++++  + 
Sbjct: 503 KNRCYPDVVTYNSVVDGLCKSRRINDAFL----LFDRMRAAGVMPDVVTYSIVIHSFCKD 558

Query: 659 NSFEDASMLLEELR 672
           N+ + A  +LE ++
Sbjct: 559 NNLDSAFKMLERMK 572



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 163/344 (47%), Gaps = 5/344 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++ +  R   ++ A  + +  +  G       +S +IS + ++G  +EA  +   M R  
Sbjct: 376 IMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRG 435

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            +P++   + +IDA C    +D     E+    +     PD + ++ L+    +      
Sbjct: 436 CRPDVACLSTLIDALCKAAAIDSAQ--ELLRMSIGMDCAPDVVAYSILIHALCKAKRLPE 493

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A +  + MV      D+ TYN+++D +CK  +++ AF +   M A  + P+VVTYS +I 
Sbjct: 494 AESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIH 553

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            + K   LD A  M   MK      D V+Y+ +++   K G  ++A  V +EM   G   
Sbjct: 554 SFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAP 613

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + VTYN L+ G  K  K ++   M E M+    +P+ +TY+ LI+        +EA ++ 
Sbjct: 614 NLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVL 673

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM--TKEG 539
           RE K  G   D + Y  L+ AL K   +E    LL EM  T+EG
Sbjct: 674 REMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEG 717



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 182/398 (45%), Gaps = 28/398 (7%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            + +I  + +  +VD+A  +F      G    +  +++L+    +S    +A  +   M R
Sbjct: 1162 NTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTR 1221

Query: 257  -YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
                 P+++TYN VID  C    VD  +  ++F  ML +G+ PD +T++ +++   +   
Sbjct: 1222 KQGCSPDIITYNTVIDGLCKSKRVDRAY--KLFLQMLSDGLAPDDVTYSIVISSLCKWRF 1279

Query: 315  WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             + A N+   M+  G D    TY TL+D  CK   +D A EI+  + +K   P+VVT+S 
Sbjct: 1280 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 1339

Query: 375  MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
             ID  +K GRL  A  +   M   G+  D V+YNT+L  +      E+A+ + + M   G
Sbjct: 1340 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCG 1399

Query: 435  IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC-----------------VSPNLLTY 477
               D  TY  L+G    +  Y ++     +   D                  V  ++   
Sbjct: 1400 CEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLG 1459

Query: 478  STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
              ++D++ K G  ++A ++F    Q     +VVL+SA++     +   E A  L   M  
Sbjct: 1460 CAIVDMFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAFGLWRVMGL 1515

Query: 538  EGIRPNVVTYNSIIDAFGRSATTECTVDD---VERDLG 572
            EG+ P+ VT+ S++     +   +  VD+   + RD G
Sbjct: 1516 EGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYG 1553



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 19/165 (11%)

Query: 233  ALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE-----IF 287
            A++  +G+ G  Q+A  VF  M     + N+V ++A++      GV   H  E     ++
Sbjct: 1461 AIVDMFGKCGSPQDARKVFEGMD----QRNVVLWSAML------GVYVFHKQEEQAFGLW 1510

Query: 288  DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR-GIDQDIFTYNTLLDAICK 346
              M   GV+PD +TF SLL +C   GL +AA + F  +    G++  +  ++ ++D + +
Sbjct: 1511 RVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGR 1570

Query: 347  GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
               ++ A ++M  MP K   P+  T++ ++  Y   G  + AL +
Sbjct: 1571 LGLVNEAEDLMLGMPCK---PSAATWNCLLSAYKICGDFERALRV 1612


>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Glycine max]
          Length = 587

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 220/444 (49%), Gaps = 38/444 (8%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVV-EIFD 288
             S L+  Y +S   Q+AI VF  M+ + +KP+L     ++++  K GV   H+V +I+ 
Sbjct: 128 VLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVT--HMVWKIYK 185

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M++ GV P+   +N L   CS+ G  E A  L NEM  +G+ QDIFTYNTLL   CK  
Sbjct: 186 RMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKG 245

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
               A  I   M  + I+ ++V+Y+++I G+ K GR+ +A+ MFSE+K      + V+Y 
Sbjct: 246 MHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIK--NATPNHVTYT 303

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T++  Y K    EEAL +CK ME+ G+    VTYN++L    + G+  +  ++  +M   
Sbjct: 304 TLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSER 363

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            +  + +T +TLI+ Y K G  K A++   +  +AGLK D   Y ALI   CK   +ESA
Sbjct: 364 KLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESA 423

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
             L+  M   G  P+  TY+ I+D + +                      N+DA+ +  D
Sbjct: 424 KELMFSMLDAGFTPSYCTYSWIVDGYNK--------------------KDNMDAVLALPD 463

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE-ILCILGVFQKMHKLKIKPNVVT 647
           + +      D   + V+  L+          + C+ E I C   +F  M    I    V 
Sbjct: 464 EFLSRGICLD---VSVYRALI---------RSSCKVERIQCAERLFYHMEGKGISGESVI 511

Query: 648 FSAILNACSRCNSFEDASMLLEEL 671
           +++I  A     +   AS +LEE+
Sbjct: 512 YTSIAYAYWNVGNVSAASSMLEEM 535



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 174/362 (48%), Gaps = 38/362 (10%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           ++A + L+++  + G       ++  M +  + PN+  YN +  AC K G D +   ++ 
Sbjct: 161 LHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIYNCLFHACSKSG-DVERAEQLL 219

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           ++M   GV  D  T+N+LL++  + G+   A ++ N M   GI+ DI +YN+L+   CK 
Sbjct: 220 NEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKE 279

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM---------------- 391
            +M  A  + +E+  KN +PN VTY+T+IDGY K   L++AL M                
Sbjct: 280 GRMREAMRMFSEI--KNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTY 337

Query: 392 -------------------FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
                               +EM    +  D ++ NT+++ Y K+G  + AL    +M  
Sbjct: 338 NSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLE 397

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           +G++ D  TY AL+ G+ K  + +  + +   M     +P+  TYS ++D Y+K      
Sbjct: 398 AGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDA 457

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            + +  EF   G+  DV +Y ALI + CK   ++ A  L   M  +GI    V Y SI  
Sbjct: 458 VLALPDEFLSRGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAY 517

Query: 553 AF 554
           A+
Sbjct: 518 AY 519



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 144/340 (42%), Gaps = 68/340 (20%)

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF-------------------------- 397
           N   N    S ++  YAK+    DA+ +F +M+                           
Sbjct: 121 NQEVNSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMV 180

Query: 398 ---------LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
                    +G+  +   YN +    +K G  E A  +  EM+  G+ +D  TYN LL  
Sbjct: 181 WKIYKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSL 240

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           Y K+G + E   +  +M+ + ++ ++++Y++LI  + K G  +EAM++F E K A    +
Sbjct: 241 YCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKNA--TPN 298

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            V Y+ LID  CK   +E A+ +   M  +G+ P VVTYNSI+    R    +  + D  
Sbjct: 299 HVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSIL----RKLCQDGRIRDAN 354

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
           + L +  E            + +Q    T N +I  + ++   K+               
Sbjct: 355 KLLNEMSE------------RKLQADNITCNTLINAYCKIGDLKSA-------------- 388

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
            L    KM +  +KP+  T+ A+++   + N  E A  L+
Sbjct: 389 -LKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELM 427


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 172/627 (27%), Positives = 293/627 (46%), Gaps = 79/627 (12%)

Query: 184 KREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGY 243
           KR  R N Q    +A+IS L RLGK+++A  ++   L EG       ++ALI+     G 
Sbjct: 373 KRGCRPNVQT--YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 430

Query: 244 CQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
              A+ +F+ M+ +    N  TYN +I     GG D +  + +F+ ML+ G  P  +T+N
Sbjct: 431 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGG-DIEKAMVLFEKMLKMGPLPTVVTYN 489

Query: 304 SLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           +L+    ++G +  AAR L + M   G + D +TYN L+    K  +++ A     EM  
Sbjct: 490 TLINGYLTKGNVNNAAR-LLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE 548

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
             ++PN V+Y+T+IDG++K G++D AL++   M+ +G   +  SYN V++  +K  RF E
Sbjct: 549 CGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSE 608

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A  +C +M   G+  + +TY  L+ G  + G+     ++F  M+     PNL TYS+LI 
Sbjct: 609 AEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 668

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
              + G   EA  + +E ++ GL  D V +++LID     G ++ A  LL  M   G +P
Sbjct: 669 GLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKP 728

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII 602
           N  TY+ ++    +    EC +  +E  +  Q E+       S  +KDV           
Sbjct: 729 NYRTYSVLLKGLQK----ECLL--LEEKVAVQHEAV---YSFSPHEKDVN---------F 770

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
           ++   L+A                        +M ++  +P + T+S +++   R   F 
Sbjct: 771 EIVSNLLA------------------------RMSEIGCEPTLDTYSTLVSGLCRKGRFY 806

Query: 663 DASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWV-QALSLFDEVKLMDSSTASAFYN 717
           +A  L+++++      D ++Y   + LL+ +  N+ V  AL +F  ++        + Y 
Sbjct: 807 EAEQLVKDMKERGFCPDREIY---YSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYR 863

Query: 718 ALTDMLWHFGQKRGAQLVVLEGKRRQVW---ENVWS--------ESCLD-----LHLMSS 761
           AL   L   GQ   AQ  + +    + W   E VW+        E  LD     LH+M S
Sbjct: 864 ALICALCKAGQVEEAQ-ALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMES 922

Query: 762 GAARAMVHAWLLNIHSIVFEGHELPKL 788
                    +  NI + V  G EL ++
Sbjct: 923 -------KNFTPNIQTYVILGRELSRI 942



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 246/506 (48%), Gaps = 71/506 (14%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L +   V+ A+N+++  LN G   ++  F+ LI+   + G  +EA  + + + +Y+L P+
Sbjct: 215 LAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPD 274

Query: 263 LVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARN 320
           + TY ++I   C    +D      +FD M++ G  P+ +T+++L+  +C+ G + EA  +
Sbjct: 275 VFTYTSLILGHCRNRNLDL--AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL-D 331

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           +  EM+ +GI+  ++TY   + A+C     + A E++A M  +   PNV TY+ +I G +
Sbjct: 332 MLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLS 391

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF-------------------- 420
           + G+L+ A+ ++ +M   G+  + V+YN +++     GRF                    
Sbjct: 392 RLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 451

Query: 421 ---------------EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
                          E+A+++ ++M   G     VTYN L+ GY  +G  +   R+ + M
Sbjct: 452 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 511

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           K +   P+  TY+ L+  +SK G  + A   F+E  + GL  + V Y+ LID   K+G V
Sbjct: 512 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKV 571

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           + A+SLL+ M + G  PNV +YN++I+                  L K+   +  + +C 
Sbjct: 572 DIALSLLERMEEMGCNPNVESYNAVING-----------------LSKENRFSEAEKICD 614

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
           +    + E G   N I   +  L+      G+ +   +        +F  M K K  PN+
Sbjct: 615 K----MAEQGLLPNVI--TYTTLIDGLCRNGRTQFAFK--------IFHDMEKRKCLPNL 660

Query: 646 VTFSAILNACSRCNSFEDASMLLEEL 671
            T+S+++    +    ++A +LL+E+
Sbjct: 661 YTYSSLIYGLCQEGKADEAEILLKEM 686



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 234/484 (48%), Gaps = 39/484 (8%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           ++  ML +G+QP  +TFN+L+ + S+ G    A  + +++    +  D+FTY +L+   C
Sbjct: 227 LYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHC 286

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           +   +DLAF +   M  +   PN VTYST+I+G    GR+D+AL+M  EM   GI     
Sbjct: 287 RNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVY 346

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y   ++    +   EEA+ +   M+  G R +  TY AL+ G  + GK +    ++ +M
Sbjct: 347 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 406

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             + + PN +TY+ LI+    GG +  A++IF   +  G  A+   Y+ +I  LC  G +
Sbjct: 407 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 466

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           E A+ L ++M K G  P VVTYN++I+ +     T+  V++  R L   KE+      C 
Sbjct: 467 EKAMVLFEKMLKMGPLPTVVTYNTLINGY----LTKGNVNNAARLLDLMKENG-----CE 517

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
            D+                + +LV+  +  GK E+            FQ+M +  + PN 
Sbjct: 518 PDE--------------WTYNELVSGFSKWGKLESASF--------YFQEMVECGLNPNP 555

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRLF----DNQVY-GVAHGLLMGYRDNIWVQALSL 700
           V+++ +++  S+    + A  LLE +       + + Y  V +GL    ++N + +A  +
Sbjct: 556 VSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGL---SKENRFSEAEKI 612

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMS 760
            D++           Y  L D L   G+ + A  +  + ++R+   N+++ S L   L  
Sbjct: 613 CDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 672

Query: 761 SGAA 764
            G A
Sbjct: 673 EGKA 676



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 174/390 (44%), Gaps = 30/390 (7%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GKVD+A ++ E     G    V +++A+I+   +     EA  + + M    L PN++TY
Sbjct: 569 GKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITY 628

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
             +ID  C  G   F    +IF DM +    P+  T++SL+    + G  + A  L  EM
Sbjct: 629 TTLIDGLCRNGRTQF--AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEM 686

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             +G+  D  T+ +L+D      ++D AF ++  M      PN  TYS ++ G  K   L
Sbjct: 687 ERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLL 746

Query: 386 ------------------------DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
                                   +   N+ + M  +G      +Y+T++S   + GRF 
Sbjct: 747 LEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFY 806

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           EA  + K+M+  G   D   Y +LL  + K  + D   ++F  ++A     +L  Y  LI
Sbjct: 807 EAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALI 866

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
               K G  +EA  +F    +    AD ++++ L+D L K G ++  + LL  M  +   
Sbjct: 867 CALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFT 926

Query: 542 PNVVTYNSI---IDAFGRSATTECTVDDVE 568
           PN+ TY  +   +   G+S  +E   D ++
Sbjct: 927 PNIQTYVILGRELSRIGKSIESEPLADKLK 956



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 145/294 (49%), Gaps = 39/294 (13%)

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           +I AC +   + + V +  +++   G      + N+LL   ++  + E ARNL+ +M++ 
Sbjct: 176 MIKAC-RNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 234

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           GI   + T+NTL++ + K  ++  A  I++++   ++SP+V TY+++I G+ +   LD A
Sbjct: 235 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 294

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             +F          DR                         M   G   ++VTY+ L+ G
Sbjct: 295 FGVF----------DR-------------------------MVKEGCDPNSVTYSTLING 319

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
              +G+ DE   M E+M    + P + TY+  I         +EA+++    K+ G + +
Sbjct: 320 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 379

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSAT 559
           V  Y+ALI  L + G +E A+ L  +M KEG+ PN VTYN++I+     GR +T
Sbjct: 380 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFST 433



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 184/409 (44%), Gaps = 33/409 (8%)

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT----Y 337
           HV EI        V  D  +        S+   ++   N F  M++R +   +F      
Sbjct: 119 HVAEIV------AVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHI 172

Query: 338 NTLLDAICKGAQ-MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
             L+   C+  + +    + + E+       ++ + +T++   AK   ++ A N++ +M 
Sbjct: 173 RILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQML 232

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             GI    +++NT+++I +K G+  EA L+  ++    +  D  TY +L+ G+ +    D
Sbjct: 233 NSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLD 292

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
               +F++M  +   PN +TYSTLI+     G   EA+ +  E  + G++  V  Y+  I
Sbjct: 293 LAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 352

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL--GKQ 574
            ALC     E A+ L+  M K G RPNV TY ++I    R    E  +    + L  G  
Sbjct: 353 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 412

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN-RCRQEI---LCIL 630
             +   +A+ ++    +   GR     +K+F  +     G G   N +   EI   LC+ 
Sbjct: 413 PNTVTYNALINE----LCVGGRFSTA-LKIFHWM----EGHGSLANTQTYNEIIKGLCLG 463

Query: 631 G-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           G       +F+KM K+   P VVT++ ++N      +  +A+ LL+ ++
Sbjct: 464 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 512



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 3/190 (1%)

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL-VTYNA 268
           ++  N+       G   T+  +S L+S   R G   EA  +   MK     P+  + Y+ 
Sbjct: 771 EIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSL 830

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           +I  C    VD  H ++IF  +   G Q     + +L+    + G  E A+ LF+ M+ +
Sbjct: 831 LIAHCKNLEVD--HALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEK 888

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
             + D   +  L+D + K  ++DL  +++  M +KN +PN+ TY  +    ++ G+  ++
Sbjct: 889 EWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIES 948

Query: 389 LNMFSEMKFL 398
             +  ++K L
Sbjct: 949 EPLADKLKVL 958


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 145/511 (28%), Positives = 241/511 (47%), Gaps = 37/511 (7%)

Query: 178 CFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISA 237
           C AF V + +         ++++  L ++G VDLA  I++  +  G    VY  + +I+A
Sbjct: 308 CEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINA 367

Query: 238 YGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP 297
             ++   +   S  + M+   + P++VTYN +I+A  + G+  +   E+ D M   G++P
Sbjct: 368 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL-LEEAFELMDSMSGKGLKP 426

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
              T+N+++    + G +  A+ + +EM+  G+  D  TYN LL   C+   M  A  I 
Sbjct: 427 CVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIF 486

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
            EMP++ + P++V++S +I   +K G LD AL  F +MK  G+  D V Y  ++  + + 
Sbjct: 487 DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 546

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G   EAL V  EM   G   D VTYN +L G  K+    E   +F +M    V P+  T+
Sbjct: 547 GVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 606

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           +TLI+ Y K G   +A+ +F    Q  LK DVV Y+ LID  CK   +E    L ++M  
Sbjct: 607 TTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMIS 666

Query: 538 EGIRPNVVTYNSIIDAF-------------------GRSATTECTVDDVERDLGKQKESA 578
             I PN ++Y  +I+ +                   G  AT   T + + +   +   + 
Sbjct: 667 RRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATI-ITCNTIVKGYCRAGNAV 725

Query: 579 NLDAMCSQD-DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
             D   S    K +   G T N +I  F           K+EN  R        +  KM 
Sbjct: 726 KADEFLSNMLLKGIVPDGITYNTLINGF----------IKEENMDRA-----FALVNKME 770

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
              + P+V+T++ ILN  SR    ++A +++
Sbjct: 771 NSGLLPDVITYNVILNGFSRQGRMQEAELIM 801



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 134/502 (26%), Positives = 245/502 (48%), Gaps = 55/502 (10%)

Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI---DACGKGGVDF 280
           + +++ +FSA+I    RS    +A +V   M R +    +    +++     CG   + F
Sbjct: 232 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 291

Query: 281 KHVVEIFDDM--LRNGVQPDRI-----------TFNSLLAVCSRGGLWEAARNLFNEMVH 327
             +V  +     LR G +  R+             NSLL    + G  + A  ++ E+V 
Sbjct: 292 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVR 351

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G+  +++T N +++A+CK  +++     +++M  K + P+VVTY+T+I+ Y + G L++
Sbjct: 352 SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEE 411

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +   M   G+     +YN +++   K G++  A  V  EM   G+  D  TYN LL 
Sbjct: 412 AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLV 471

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
              +     +  R+F++M +  V P+L+++S LI + SK G   +A++ FR+ K AGL  
Sbjct: 472 ECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAP 531

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           D V+Y+ LI   C+NG++  A+ + DEM ++G   +VVTYN+I++               
Sbjct: 532 DNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNG-------------- 577

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
              L K+K       M S+ D+   E   T+  +   F        G  K  N  +   L
Sbjct: 578 ---LCKEK-------MLSEADELFTEM--TERGVFPDFYTFTTLINGYXKDGNMNKAVTL 625

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL---RLFDNQV-YGVAH 683
                F+ M +  +KP+VVT++ +++   + +  E  + L  ++   R++ N + YG+  
Sbjct: 626 -----FEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI-- 678

Query: 684 GLLMGYRDNIWV-QALSLFDEV 704
            L+ GY +   V +A  L+DE+
Sbjct: 679 -LINGYCNMGCVSEAFRLWDEM 699



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 175/347 (50%), Gaps = 1/347 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+I +L + G +D A   F    N G       ++ LI  + R+G   EA+ V + M  
Sbjct: 502 SALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 561

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                ++VTYN +++   K  +      E+F +M   GV PD  TF +L+    + G   
Sbjct: 562 QGCXLDVVTYNTILNGLCKEKM-LSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMN 620

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF  M+ R +  D+ TYNTL+D  CKG++M+   E+  +M ++ I PN ++Y  +I
Sbjct: 621 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 680

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY   G + +A  ++ EM   G     ++ NT++  Y + G   +A      M   GI 
Sbjct: 681 NGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIV 740

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +TYN L+ G+ K+   D    +  +M+   + P+++TY+ +++ +S+ G  +EA  I
Sbjct: 741 PDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELI 800

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             +  + G+  D   Y++LI+       ++ A  + DEM + G  P+
Sbjct: 801 MLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 188/369 (50%), Gaps = 6/369 (1%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGN---TVYAFSALISAYGRSGYCQEAISV 250
           +L  A   IL  + K  +++     +L   YGN       F  L+  Y ++   +E    
Sbjct: 251 RLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEA 310

Query: 251 FNSMKRYNLKPNLVTYNAVIDACGK-GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC 309
           F  +K   L  ++   N+++    K G VD     EI+ +++R+GVQ +  T N ++   
Sbjct: 311 FRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW--EIYQEVVRSGVQVNVYTLNIMINAL 368

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
            +    E  ++  ++M  +G+  D+ TYNTL++A C+   ++ AFE+M  M  K + P V
Sbjct: 369 CKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCV 428

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
            TY+ +I+G  K G+   A  +  EM  +G+  D  +YN +L    +     +A  +  E
Sbjct: 429 FTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDE 488

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M S G+  D V+++AL+G   K G  D+  + F  MK   ++P+ + Y+ LI  + + G+
Sbjct: 489 MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 548

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
             EA+++  E  + G   DVV Y+ +++ LCK  ++  A  L  EMT+ G+ P+  T+ +
Sbjct: 549 MSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 608

Query: 550 IIDAFGRSA 558
           +I+ + +  
Sbjct: 609 LINGYXKDG 617



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 174/342 (50%), Gaps = 1/342 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ IF+   ++G    + +FSALI    ++G   +A+  F  MK   L P+ V Y  +I 
Sbjct: 482 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 541

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              + GV     +++ D+ML  G   D +T+N++L    +  +   A  LF EM  RG+ 
Sbjct: 542 GFCRNGV-MSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 600

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D +T+ TL++   K   M+ A  +   M  +N+ P+VVTY+T+IDG+ K   ++    +
Sbjct: 601 PDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 660

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           +++M    I  + +SY  +++ Y  +G   EA  +  EM   G     +T N ++ GY +
Sbjct: 661 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 720

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G   +       M    + P+ +TY+TLI+ + K      A  +  + + +GL  DV+ 
Sbjct: 721 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 780

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           Y+ +++   + G ++ A  ++ +M + G+ P+  TY S+I+ 
Sbjct: 781 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 822


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 208/387 (53%), Gaps = 11/387 (2%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           +V LA +I    L  GY        +L++ + R     +A+S+ + M     KP++V YN
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194

Query: 268 AVIDACGKGGVDFKHVVEIFD---DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           A+ID+  K     K V + FD   ++ R G++P+ +T+ +L+        W  A  L ++
Sbjct: 195 AIIDSLCKT----KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+ + I  ++ TY+ LLDA  K  ++  A E+  EM   +I P++VTYS++I+G     R
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +D+A  MF  M   G   D VSYNT+++ + K  R E+ + + +EM   G+  + VTYN 
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G+ + G  D+ +  F QM    +SP++ TY+ L+      G  ++A+ IF + ++  
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           +  D+V Y+ +I  +CK G VE A SL   ++ +G++P++VTY +++        T+  +
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL----CTKGLL 486

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDV 591
            +VE    K K+   +   C+  D D+
Sbjct: 487 HEVEALYTKMKQEGLMKNDCTLSDGDI 513



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 192/349 (55%), Gaps = 1/349 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++++   R  +V  A ++ +  +  GY   + A++A+I +  ++    +A   F  ++R 
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            ++PN+VTY A+++        +     +  DM++  + P+ IT+++LL    + G    
Sbjct: 220 GIRPNVVTYTALVNGLCNSS-RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A+ LF EMV   ID DI TY++L++ +C   ++D A ++   M +K    +VV+Y+T+I+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+ KA R++D + +F EM   G+  + V+YNT++  + + G  ++A     +M+  GI  
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  TYN LLGG    G+ ++   +FE M+   +  +++TY+T+I    K G  +EA  +F
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
                 GLK D+V Y+ ++  LC  GL+    +L  +M +EG+  N  T
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 183/349 (52%), Gaps = 9/349 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I  L +  +V+ A + F+    +G    V  ++AL++    S    +A  + + M +
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN++TY+A++DA  K G       E+F++M+R  + PD +T++SL+         +
Sbjct: 254 KKITPNVITYSALLDAFVKNG-KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +F+ MV +G   D+ +YNTL++  CK  +++   ++  EM  + +  N VTY+T+I
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+ +AG +D A   FS+M F GI  D  +YN +L      G  E+AL++ ++M+   + 
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTY  ++ G  K GK +E   +F  +    + P+++TY+T++      GL  E   +
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           + + KQ GL  +        D    +G +  +  L+ +M   G  P+++
Sbjct: 493 YTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPSLL 533



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 155/284 (54%)

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +     +++F DM+++   P  + FN LL+   +   ++   +L  +M   GI  D++T+
Sbjct: 64  IKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N +++  C   Q+ LA  I+ +M      P+ VT  ++++G+ +  R+ DA+++  +M  
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           +G   D V+YN ++    K  R  +A    KE+E  GIR + VTY AL+ G     ++ +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             R+   M    ++PN++TYS L+D + K G   EA ++F E  +  +  D+V YS+LI+
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            LC +  ++ A  + D M  +G   +VV+YN++I+ F ++   E
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 151/321 (47%), Gaps = 40/321 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L N   WS A +  +  +K++   N                            
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPN---------------------------- 259

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
                    V  +SAL+ A+ ++G   EA  +F  M R ++ P++VTY+++I+  C    
Sbjct: 260 ---------VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D  +  ++FD M+  G   D +++N+L+    +    E    LF EM  RG+  +  TY
Sbjct: 311 IDEAN--QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           NTL+    +   +D A E  ++M    ISP++ TY+ ++ G    G L+ AL +F +M+ 
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             + LD V+Y TV+    K G+ EEA  +   +   G++ D VTY  ++ G   +G   E
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488

Query: 458 VRRMFEQMKADCVSPNLLTYS 478
           V  ++ +MK + +  N  T S
Sbjct: 489 VEALYTKMKQEGLMKNDCTLS 509



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 31/232 (13%)

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           V +N LL    K  KYD V  + ++M+   +  +L T++ +I+ +        A+ I  +
Sbjct: 86  VDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGK 145

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             + G + D V   +L++  C+   V  AVSL+D+M + G +P++V YN+IID+  ++  
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
                D                       K+++  G   N +   +  LV       +  
Sbjct: 206 VNDAFDFF---------------------KEIERKGIRPNVV--TYTALVNGLCNSSRWS 242

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +  R        +   M K KI PNV+T+SA+L+A  +     +A  L EE+
Sbjct: 243 DAAR--------LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 249/532 (46%), Gaps = 40/532 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI+   R  K+  A ++   A   GY      FS L++ +   G   EA+++ + M  
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              +P+LVT + +I+  C KG V     + + D M+  G QPD +T+  +L    + G  
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRV--SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A +LF +M  R I   +  Y+ ++D++CK    D A  +  EM  K I  +VVTYS++
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G    G+ DD   M  EM    I  D V+++ ++ ++ K G+  EA  +  EM + GI
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D +TYN+L+ G+ K+    E  +MF+ M +    P+++TYS LI+ Y K     + M+
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +FRE    GL  + + Y+ L+   C++G + +A  L  EM   G+ P+VVTY  ++D   
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
            +      ++  E+    QK    L                     I ++  ++      
Sbjct: 467 DNGELNKALEIFEK---MQKSRMTLG--------------------IGIYNIIIHGMCNA 503

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR--- 672
            K ++           +F  +    +KP+VVT++ ++    +  S  +A ML  +++   
Sbjct: 504 SKVDDA--------WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555

Query: 673 -LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
              D+  Y +     +G   +  + ++ L +E+K+   S  S+    + DML
Sbjct: 556 CTPDDFTYNILIRAHLG--GSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 189/397 (47%), Gaps = 17/397 (4%)

Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAM 199
           D+ +K E +   A    Y+ ++  L   G +  A+  F       E K  +  +   S++
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF----NEMEMKGIKADVVTYSSL 286

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I  L   GK D    +    +       V  FSALI  + + G   EA  ++N M    +
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            P+ +TYN++ID   K         ++FD M+  G +PD +T++ L+    +    +   
Sbjct: 347 APDTITYNSLIDGFCKENC-LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            LF E+  +G+  +  TYNTL+   C+  +++ A E+  EM ++ + P+VVTY  ++DG 
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465

Query: 380 AKAGRLDDALNMFSEMK----FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
              G L+ AL +F +M+     LGIG+    YN ++       + ++A  +   +   G+
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGI----YNIIIHGMCNASKVDDAWSLFCSLSDKGV 521

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D VTYN ++GG  K+G   E   +F +MK D  +P+  TY+ LI  +  G     +++
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE 581

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           +  E K  G  AD      +ID L    L +S + +L
Sbjct: 582 LIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDML 618



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 187/398 (46%), Gaps = 33/398 (8%)

Query: 276 GGVDFK--HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G VD K    +++F+ M+++   P  I FN L +  +R   ++        M   GI+ D
Sbjct: 45  GIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHD 104

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++T   +++  C+  ++  AF ++         P+ +T+ST+++G+   GR+ +A+ +  
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD 164

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M  +    D V+ +T+++     GR  EAL++   M   G + D VTY  +L    K G
Sbjct: 165 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
                  +F +M+   +  +++ YS +ID   K G + +A+ +F E +  G+KADVV YS
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           +LI  LC +G  +    +L EM    I P+VVT++++ID F +           E  L +
Sbjct: 285 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK-----------EGKLLE 333

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
            KE  N         + +     T N +I  F            KEN C  E      +F
Sbjct: 334 AKELYN-----EMITRGIAPDTITYNSLIDGFC-----------KEN-CLHE---ANQMF 373

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             M     +P++VT+S ++N+  +    +D   L  E+
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 235/506 (46%), Gaps = 74/506 (14%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G   L  + +   L+       Y  + ++ +Y ++    E  +V + M++  + P++V
Sbjct: 136 RAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVV 195

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           T+N ++DA  + G D +  + + D M+  G++P  +T+NS+L    R G W+ AR +F  
Sbjct: 196 THNVMVDARFRAG-DVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRA 254

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G+  D+ ++N L+   C+  +++ A     EM  + ++P+VV++S +I  + + G 
Sbjct: 255 MDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGE 314

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +D A     EM+  G+  D V Y  V+  + + G   EAL V  EM + G   D VTYN 
Sbjct: 315 MDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNT 374

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           LL G  K+ +  +   +  +MK   V P+L T++TLI  Y + G  ++A+Q F       
Sbjct: 375 LLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQR 434

Query: 505 LKADVVLYSALIDALCKN-----------------------------------GLVESAV 529
           L+ D+V Y+ LID +C+                                    G V++A 
Sbjct: 435 LRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAF 494

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATT--------ECTVDDVERDL---------- 571
           + LDEM  +GI PN++TYNSII  + RS           +   D V  DL          
Sbjct: 495 AFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGY 554

Query: 572 ---GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
              GK  E+ NL  +   ++++VQ    T N II  F        G  ++ +        
Sbjct: 555 VKEGKMHEAFNLLKI--MENENVQPDAVTYNMIISGFSV-----HGNMQEAD-------- 599

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNA 654
              V++KM    I+P+  T+ +++N 
Sbjct: 600 --WVYKKMGARGIEPDRYTYMSMING 623



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 183/352 (51%), Gaps = 1/352 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R G+ D A+ +F      G    V +F+ LI  + R+G  +EA+  +  M+   + P+
Sbjct: 239 LLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPD 298

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           +V+++ +I    + G +  H  E   +M   G+ PD + +  ++    R GL   A  + 
Sbjct: 299 VVSFSCLIGLFTRRG-EMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVR 357

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           +EMV  G   D+ TYNTLL+ +CK  ++  A E++ EM  + + P++ T++T+I GY + 
Sbjct: 358 DEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRD 417

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G ++ AL  F  +    +  D V+YNT++    + G   +A  +  +M S  I  + VTY
Sbjct: 418 GNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTY 477

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           + L+  + ++G+ D      ++M    + PN++TY+++I  Y + G   +  Q   + + 
Sbjct: 478 SILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRH 537

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             +  D++ Y+ LI    K G +  A +LL  M  E ++P+ VTYN II  F
Sbjct: 538 DKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGF 589



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 195/403 (48%), Gaps = 11/403 (2%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCF----AFAVKREERKNDQGKLASAMISILGRLGKVD 210
           G   Y  +L+ L   G W KA + F    A  V  + R  +       +I    R G+++
Sbjct: 228 GLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNM------LIGGFCRAGELE 281

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
            A   ++          V +FS LI  + R G    A      M+ + L P+ V Y  VI
Sbjct: 282 EALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVI 341

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
               + G+  +  + + D+M+  G  PD +T+N+LL    +      A  L NEM  RG+
Sbjct: 342 GGFCRAGLMLE-ALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGV 400

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             D+ T+ TL+   C+   ++ A +    +  + + P++VTY+T+IDG  + G L  A  
Sbjct: 401 PPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANE 460

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           ++ +M    I  + V+Y+ ++  + + G+ + A     EM + GI  + +TYN+++ GY 
Sbjct: 461 LWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYC 520

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           + G   + ++   +M+ D V P+L+TY+TLI  Y K G   EA  + +  +   ++ D V
Sbjct: 521 RSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAV 580

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            Y+ +I     +G ++ A  +  +M   GI P+  TY S+I+ 
Sbjct: 581 TYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMING 623



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 177/347 (51%), Gaps = 1/347 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I +  R G++D A          G       ++ +I  + R+G   EA+ V + M  
Sbjct: 303 SCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVA 362

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           +   P++VTYN +++   K         E+ ++M   GV PD  TF +L+    R G  E
Sbjct: 363 FGCLPDVVTYNTLLNGLCKER-RLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIE 421

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A   F+ +  + +  DI TYNTL+D +C+   +  A E+  +M ++ I PN VTYS +I
Sbjct: 422 KALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILI 481

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D + + G++D+A     EM   GI  + ++YN+++  Y + G   +      +M    + 
Sbjct: 482 DSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVM 541

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +TYN L+ GY K+GK  E   + + M+ + V P+ +TY+ +I  +S  G  +EA  +
Sbjct: 542 PDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWV 601

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           +++    G++ D   Y ++I+     G  + +  L DEM ++G+ P+
Sbjct: 602 YKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 186/356 (52%), Gaps = 30/356 (8%)

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           + +T N ++ + CK  Q      +++EM  + + P+VVT++ M+D   +AG ++ A+ + 
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
             M   GI    V+YN+VL    + GR+++A  V + M++ G+  D  ++N L+GG+ + 
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G+ +E  R +++M+   V+P+++++S LI ++++ G    A +  RE ++ GL  D V+Y
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG 572
           + +I   C+ GL+  A+ + DEM   G  P+VVTYN++++   +    E  + D E  L 
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCK----ERRLSDAEELLN 393

Query: 573 KQKESANLDAMCSQD--------DKDVQEAGRTDNQI--------IKVFGQLVAEKAGQG 616
           + KE      +C+          D ++++A +  + I        I  +  L+       
Sbjct: 394 EMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLI------- 446

Query: 617 KKENRCRQEILCILG-VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             +  CRQ  L     ++  MH  +I PN VT+S ++++       ++A   L+E+
Sbjct: 447 --DGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM 500



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 42/264 (15%)

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           ++ + CK        +++ EM K  + P+VVT+N ++DA  R+   E  +          
Sbjct: 165 MVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAM---------- 214

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR------------- 621
              A +D+M S   K ++    T N ++K  G L   +  + ++  R             
Sbjct: 215 ---ALIDSMVS---KGIKPGLVTYNSVLK--GLLRNGRWDKAREVFRAMDACGVAPDVRS 266

Query: 622 --------CRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                   CR  E+   L  +++M   ++ P+VV+FS ++   +R    + A+  L E+R
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMR 326

Query: 673 LFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKR 730
            F     GV + +++G   R  + ++AL + DE+           YN L + L    +  
Sbjct: 327 EFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLS 386

Query: 731 GAQLVVLEGKRRQVWENVWSESCL 754
            A+ ++ E K R V  ++ + + L
Sbjct: 387 DAEELLNEMKERGVPPDLCTFTTL 410


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 199/363 (54%), Gaps = 3/363 (0%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            + +I    R  +  LA  +    +  G+  ++    +L++ + +    QEA+S+ +SM  
Sbjct: 654  TILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAE 713

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              L+PN+V YN VI+   K   D  + +EIF  M + G+  D +T+N+L++     G W 
Sbjct: 714  LGLEPNVVIYNTVINGLCKNR-DLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWT 772

Query: 317  AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
             A  L  +MV R ID ++  +  L+D   K   +  A  +  EM  +++ PN++TY+++I
Sbjct: 773  DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLI 832

Query: 377  DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            +G+   GRL DA +MF  M   G   D V+YNT+++ + K  R E+ + +  EM   G+ 
Sbjct: 833  NGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLV 892

Query: 437  KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC-VSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             DA TYN L+ GY + GK +  +++F +M  DC V P+++TY+ L+D     G  ++A+ 
Sbjct: 893  GDAFTYNTLIHGYCQAGKLNVAQKVFNRM-VDCGVPPDIVTYNILLDCLCNNGKIEKALV 951

Query: 496  IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            +  + ++  +  D++ Y+ +I  +C+N  V+ A  L   +T++G++ + + Y ++I    
Sbjct: 952  MVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLC 1011

Query: 556  RSA 558
            R+ 
Sbjct: 1012 RNG 1014



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 200/406 (49%), Gaps = 10/406 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    R  ++ LA +I    +  GY  ++  F +L+  +       +A S+  SM +
Sbjct: 104 TILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVK 163

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG-VQPDRITFNSLLAVCSRGGLW 315
              +PN+V YN +ID   K G D    +E+ ++M + G +  D +T+N+LL      G W
Sbjct: 164 SGYEPNVVVYNTLIDCLCKNG-DVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEW 222

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  +  +M  R I+ D+FT+  L+DA  K   +D A E+  +M   +I PN VTY+++
Sbjct: 223 RQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSL 282

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+G    GRL  A   F  M   G   + V+YNT+++ + K  R E+ + + + M   G+
Sbjct: 283 INGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  TYN L+ GY + GK    + +F  M +  V+P+++T+  L+      G    AM 
Sbjct: 343 VGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMV 402

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            F + +       +V Y+ +I  LCK   VE A  L   +  EG++P+  TY  +I    
Sbjct: 403 KFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLC 462

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
           ++       D++ R   + KE      +C  +D  + E G T+NQ+
Sbjct: 463 KNGPRR-EADELFR---RMKEDG---IICQAEDGHLGEHG-TNNQV 500



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 191/394 (48%), Gaps = 11/394 (2%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K D A  +F   L      ++  F+ +++A  +       I +F+ M+   +  +L ++ 
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            +I  C      F   + +   M++ G QP  +T  SLL    +G  ++ A +L + M  
Sbjct: 655 ILIH-CFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAE 713

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G++ ++  YNT+++ +CK   ++ A EI   M  K I  + VTY+T+I G   +GR  D
Sbjct: 714 LGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTD 773

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +  +M    I  + + +  ++  + K G   EA  + KEM    +  + +TYN+L+ 
Sbjct: 774 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           G+  QG+  + + MF+ M +    P+++TY+TLI  + K    ++ M++F E    GL  
Sbjct: 834 GFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVG 893

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           D   Y+ LI   C+ G +  A  + + M   G+ P++VTYN ++D    +   E  +  V
Sbjct: 894 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMV 953

Query: 568 ERDLGKQKESAN-------LDAMCSQDDKDVQEA 594
           E DL K +   +       +  MC  D   V+EA
Sbjct: 954 E-DLQKNQMDVDIITYNIIIQGMCRND--KVKEA 984



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 200/428 (46%), Gaps = 39/428 (9%)

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           + F     +F +ML++   P  + F  +L   ++   ++    LF++M + GI  D++++
Sbjct: 594 IKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSF 653

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             L+   C+ ++  LA  ++ +M      P++VT  ++++G+ +  R  +A+++   M  
Sbjct: 654 TILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAE 713

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           LG+  + V YNTV++   K      AL +   ME  GI  DAVTYN L+ G    G++ +
Sbjct: 714 LGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTD 773

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             R+   M    + PN++ ++ LID + K G   EA  +++E  +  +  +++ Y++LI+
Sbjct: 774 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
             C  G +  A  + D M  +G  P+VVTYN++I  F +S   E                
Sbjct: 834 GFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE---------------- 877

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
             +   C    + +     T N +I  + Q  A K    +K             VF +M 
Sbjct: 878 DGMKLFCEMTHQGLVGDAFTYNTLIHGYCQ--AGKLNVAQK-------------VFNRMV 922

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQA 697
              + P++VT++ +L+        E A +++E+L+     V  + +        NI +Q 
Sbjct: 923 DCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITY--------NIIIQG 974

Query: 698 LSLFDEVK 705
           +   D+VK
Sbjct: 975 MCRNDKVK 982



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 151/285 (52%), Gaps = 1/285 (0%)

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           + F+  +++F +M+++   P  + F  LL   +    +E       +M   GI  D++++
Sbjct: 44  IRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSF 103

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             L+   C+ +++ LA  I+ +M      P++VT+ +++ G+    R+ DA ++ + M  
Sbjct: 104 TILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVK 163

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG-IRKDAVTYNALLGGYGKQGKYD 456
            G   + V YNT++    K G    AL +  EME  G +  D VTYN LL G    G++ 
Sbjct: 164 SGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWR 223

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           +  R+   M    ++P++ T++ LID + K G   EA +++++  Q+ +  + V Y++LI
Sbjct: 224 QAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLI 283

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + LC +G +  A    D M  +G  PNVVTYN++I+ F +S   E
Sbjct: 284 NGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVE 328



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 154/292 (52%), Gaps = 6/292 (2%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            + +IS L   G+   A  +    +       V  F+ALI  + + G   EA +++  M R
Sbjct: 759  NTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIR 818

Query: 257  YNLKPNLVTYNAVIDA-CGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
             ++ PN++TYN++I+  C +G + D KH   +FD M+  G  PD +T+N+L+    +   
Sbjct: 819  RSVHPNILTYNSLINGFCIQGRLGDAKH---MFDLMVSKGCFPDVVTYNTLITGFCKSKR 875

Query: 315  WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             E    LF EM H+G+  D FTYNTL+   C+  ++++A ++   M    + P++VTY+ 
Sbjct: 876  VEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNI 935

Query: 375  MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
            ++D     G+++ AL M  +++   + +D ++YN ++    +  + +EA  + + +   G
Sbjct: 936  LLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKG 995

Query: 435  IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY-STLIDVYS 485
            ++ DA+ Y  ++ G  + G   E  ++  +MK D   P+   Y  TL D Y+
Sbjct: 996  VKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDHYT 1047



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 113/479 (23%), Positives = 207/479 (43%), Gaps = 56/479 (11%)

Query: 349  QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            + D AF +  EM      P++V ++ ++   AK  + D  + +F +M+ LGI  D  S+ 
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 409  TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
             ++  + +  RF  AL +  +M   G +   VT  +LL G+ +  ++ E   + + M   
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 469  CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
             + PN++ Y+T+I+   K      A++IF   ++ G+ AD V Y+ LI  LC +G    A
Sbjct: 715  GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 529  VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
              LL +M K  I PNV+ + ++ID F +               G   E+ NL        
Sbjct: 775  ARLLRDMVKRKIDPNVIFFTALIDTFVKE--------------GNLLEAKNLYK--EMIR 818

Query: 589  KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
            + V     T N +I   G  +  + G  K              +F  M      P+VVT+
Sbjct: 819  RSVHPNILTYNSLIN--GFCIQGRLGDAKH-------------MFDLMVSKGCFPDVVTY 863

Query: 649  SAILNACSRCNSFEDASMLLEELR----LFDNQVYG-VAHGLLMGYRDNIWVQALSLFDE 703
            + ++    +    ED   L  E+     + D   Y  + HG     + N+   A  +F+ 
Sbjct: 864  NTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNV---AQKVFNR 920

Query: 704  VKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGA 763
            +           YN L D L + G+   A ++V + ++ Q+  ++     +  +++  G 
Sbjct: 921  MVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDI-----ITYNIIIQGM 975

Query: 764  AR--AMVHAWLLNIHSIVFEGHELPKL--LSILTGWGKHSKVVGDGALRRAVEVLLTGM 818
             R   +  AW L   S+  +G +L  +  +++++G  ++        LRR  + L T M
Sbjct: 976  CRNDKVKEAWCL-FRSLTRKGVKLDAIAYITMISGLCRN-------GLRREADKLCTRM 1026



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 138/320 (43%), Gaps = 32/320 (10%)

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A ++  EM      P+VV ++ ++   A   R +  +    +M+  GI  D  S+  ++ 
Sbjct: 49  ALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIH 108

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
            + +  R   AL +  +M   G     VT+ +LL G+  + +  +   +   M      P
Sbjct: 109 CFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEP 168

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG-LKADVVLYSALIDALCKNGLVESAVSL 531
           N++ Y+TLID   K G    A+++  E ++ G L AD+V Y+ L+  LC +G    A  +
Sbjct: 169 NVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARI 228

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
           L +MTK  I P+V T+ ++IDAF +         D  ++L KQ   ++           +
Sbjct: 229 LRDMTKRRINPDVFTFTALIDAFVKQGNL-----DEAQELYKQMLQSS-----------I 272

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
                T N +I   G  +  +    KK              F  M      PNVVT++ +
Sbjct: 273 GPNTVTYNSLIN--GLCMHGRLYHAKK-------------TFDLMASKGCFPNVVTYNTL 317

Query: 652 LNACSRCNSFEDASMLLEEL 671
           +N   +    ED   L + +
Sbjct: 318 INGFCKSRRVEDGMKLFQRM 337



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 127/277 (45%), Gaps = 3/277 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL  L   GEW +A +      KR  R N      +A+I    + G +D A+ +++ 
Sbjct: 209 YNTLLTGLCYSGEWRQAARILRDMTKR--RINPDVFTFTALIDAFVKQGNLDEAQELYKQ 266

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L    G     +++LI+     G    A   F+ M      PN+VTYN +I+   K   
Sbjct: 267 MLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSR- 325

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +  +++F  M R G+  D  T+N+L+    + G    A+++F+ MV  G+  DI T+ 
Sbjct: 326 RVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHC 385

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            LL  +C   ++  A     +M +      +V Y+ MI G  KA ++++A  +F  +   
Sbjct: 386 ILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVE 445

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           G+  D  +Y  ++    K G   EA  + + M+  GI
Sbjct: 446 GVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 30/253 (11%)

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           RFE+AL +  EM  S      V +  LL       +Y+ V    +QM+   +S +L +++
Sbjct: 45  RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            LI  + +      A+ I  +  + G    +V + +L+   C    +  A SL+  M K 
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
           G  PNVV YN++ID   ++            D+    E  N          ++++ GR  
Sbjct: 165 GYEPNVVVYNTLIDCLCKNG-----------DVNIALELLN----------EMEKKGRLA 203

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
             ++  +  L+      G+     R        + + M K +I P+V TF+A+++A  + 
Sbjct: 204 ADLV-TYNTLLTGLCYSGEWRQAAR--------ILRDMTKRRINPDVFTFTALIDAFVKQ 254

Query: 659 NSFEDASMLLEEL 671
            + ++A  L +++
Sbjct: 255 GNLDEAQELYKQM 267


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/361 (33%), Positives = 193/361 (53%), Gaps = 6/361 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L +  +V+ A N+F           VY ++ LI + G  G     + +F SM    
Sbjct: 106 LIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQG 165

Query: 259 LKPNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            +PNL TY++V+ A G  G VD     +IF  M++ G+QPD +T+N L+    + G  E 
Sbjct: 166 CQPNLFTYHSVMHAFGSAGRVD--EACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLER 223

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A +   +   R    ++ TYN+LL ++ +   +    E+  +M AK +  N +TY+ +I+
Sbjct: 224 AFDFVGK--SRSFTNEV-TYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIE 280

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
               AGR++D   ++ EM    I  D V+ N VL   +K GR E A  + ++M+  G+  
Sbjct: 281 RLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNA 340

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D VTYN L+ G G+ GK D    +  +M+ +  +PN++TY+TLI  Y K      A ++F
Sbjct: 341 DTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLF 400

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E K+ G+  +VV YS+LI+   K G  ++A+SL  EM  EG  PN VTYN +ID   R+
Sbjct: 401 LEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRA 460

Query: 558 A 558
            
Sbjct: 461 G 461



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 196/355 (55%), Gaps = 4/355 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  LG +G++D    +FE+   +G    ++ + +++ A+G +G   EA  +F  M +
Sbjct: 139 TILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQ 198

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L+P+ VTYN +IDA GK G     +   FD + ++    + +T+NSLL+   R G  +
Sbjct: 199 KGLQPDAVTYNILIDAFGKTG----QLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQ 254

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               LF +M  +G+  +  TY  L++ +    +++  +++  EM   +I  ++VT + ++
Sbjct: 255 GLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVL 314

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D  +KAGR++ A  +F +MKF G+  D V+YN +++   + G+ + A  +  EME +G  
Sbjct: 315 DCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCA 374

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + +TYN L+  YGK        R+F +MK   V+PN+++YS+LI+ + K G    A+ +
Sbjct: 375 PNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISL 434

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           FRE K  G   + V Y+ LID L + G   +A+  L EM   G +   VT + ++
Sbjct: 435 FREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLV 489



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 245/544 (45%), Gaps = 78/544 (14%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           M+++LG   + D  + + E+   +        F+ LI  YG +   ++A+    +  +  
Sbjct: 1   MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +P   TY+++I    KGG D ++ + ++  ML+    PD  TFN L+   ++    E A
Sbjct: 61  GRPTAYTYSSMIQVFMKGG-DVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEA 119

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            N+F +M    +  D++TY  L+ ++    ++D   ++   M A+   PN+ TY +++  
Sbjct: 120 CNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHA 179

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           +  AGR+D+A ++F +M   G+  D V+YN ++  + K G+ E A     +  S     +
Sbjct: 180 FGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSF---TN 236

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI----------------- 481
            VTYN+LL   G++G    +  +F QMKA  +  N LTY+ LI                 
Sbjct: 237 EVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYL 296

Query: 482 ------------------DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
                             D  SK G  + A ++F++ K  GL AD V Y+ LI+ L + G
Sbjct: 297 EMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAG 356

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR----SATTECTVDDVERDLGKQKESAN 579
            +++A +LL EM + G  PN++TYN++I ++G+    SA T   ++  ER +     S  
Sbjct: 357 KLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSY- 415

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
                S   +   +AGRTD  I                              +F++M   
Sbjct: 416 -----SSLIEGFGKAGRTDAAI-----------------------------SLFREMKAE 441

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALS 699
              PN VT++ +++   R   F  A   L E+R    Q+  V   LL+        +A S
Sbjct: 442 GCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLVRIPPQYMEEAQS 501

Query: 700 LFDE 703
            F E
Sbjct: 502 FFQE 505



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 184/392 (46%), Gaps = 56/392 (14%)

Query: 151 FKLCGADD---YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS-----AMISI 202
           FKL  + D   YT L+R LG  G     ++ F       E    QG   +     +++  
Sbjct: 127 FKLNVSPDVYTYTILIRSLGTIGRIDAVMKLF-------ESMTAQGCQPNLFTYHSVMHA 179

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
            G  G+VD A +IF+  + +G       ++ LI A+G++G  + A       + +    N
Sbjct: 180 FGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFT---N 236

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFD---------------------------------- 288
            VTYN+++ + G+ G D + ++E+F                                   
Sbjct: 237 EVTYNSLLSSLGRKG-DIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLY 295

Query: 289 -DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            +M+ N ++ D +T N++L   S+ G  EAA  LF +M  +G++ D  TYN L++ + + 
Sbjct: 296 LEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRA 355

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            ++D A  ++ EM     +PN++TY+T+I  Y K   L  A  +F EMK  G+  + VSY
Sbjct: 356 GKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSY 415

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           ++++  + K GR + A+ + +EM++ G   + VTYN L+    + G++        +M+ 
Sbjct: 416 SSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRD 475

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
                  +T S L+ +  +    +EA   F+E
Sbjct: 476 AGCQMGKVTKSLLVRIPPQ--YMEEAQSFFQE 505


>gi|255577248|ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531022|gb|EEF32875.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 808

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 226/447 (50%), Gaps = 34/447 (7%)

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
           L + Y      ++ +I  + R     +A  +F  M+ +  KP+  TYNA+I+A G+ G  
Sbjct: 135 LQKNYCARTDMYNMMIRLHARHNLTDQARGLFFEMQEWRCKPDSETYNALINAHGRAG-Q 193

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
           ++  + I +DMLR  + P R T+N+L+  C   G W  A  +  +M   G+  D+ T+N 
Sbjct: 194 WRWAMNIMEDMLREAIPPSRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDLVTHNI 253

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM--KF 397
           +L A   GAQ   A      M   NI P+  T + +I    K G+ + A+++F+ M  K 
Sbjct: 254 VLSAYKTGAQYSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMREKR 313

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
                D V++ +++ +Y+  G+ E    V   M + G+    V+YNAL+G Y   G  +E
Sbjct: 314 AECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEE 373

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +F+++KA  + P++++Y++L+  Y +    K+A ++F   K+A LK +VV ++ALID
Sbjct: 374 ALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALID 433

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
           A   NGL+  AV +L EM ++GI PN+VT  +++ A GR                   + 
Sbjct: 434 AYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAACGRCG-----------------QK 476

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
            N+DA+ S        A +     IK+    VA  +  G   N    E    + ++  M 
Sbjct: 477 VNIDAVLS--------AAKMRG--IKL--NTVACNSAIGSYMNVGEYEK--AVALYNSMR 522

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDA 664
           K+K+ PN VT++ +++ C + + +  A
Sbjct: 523 KMKVAPNSVTYTVLISGCCKMSKYGKA 549



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 135/548 (24%), Positives = 253/548 (46%), Gaps = 47/548 (8%)

Query: 148 KFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLG 207
           K +   C   D   ++  L  R   +   +   F ++ E R     +  +A+I+  GR G
Sbjct: 134 KLQKNYCARTDMYNMMIRLHARHNLTDQARGLFFEMQ-EWRCKPDSETYNALINAHGRAG 192

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           +   A NI E  L E    +   ++ LI+A G SG  +EA+ V   M    + P+LVT+N
Sbjct: 193 QWRWAMNIMEDMLREAIPPSRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDLVTHN 252

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            V+ A  K G  +   +  F+ M    ++PD  T N ++    + G  E A ++FN M  
Sbjct: 253 IVLSA-YKTGAQYSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMRE 311

Query: 328 RGID--QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           +  +   DI T+ +++       Q++    + + M A+ ++P +V+Y+ +I  YA  G  
Sbjct: 312 KRAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMS 371

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           ++AL++F ++K  G+  D VSY ++LS Y +  + ++A  +   M+ + ++ + V++NAL
Sbjct: 372 EEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNAL 431

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +  YG  G   +  ++  +M+ D + PN++T  TL+    + G       +    K  G+
Sbjct: 432 IDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAACGRCGQKVNIDAVLSAAKMRGI 491

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA------FGRSAT 559
           K + V  ++ I +    G  E AV+L + M K  + PN VTY  +I        +G++  
Sbjct: 492 KLNTVACNSAIGSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGKA-- 549

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
            E   D +E  +   KE  +   +C+   +                GQ+   ++      
Sbjct: 550 IEFFADMMELKIALTKEVCS-SVICAYSKQ----------------GQITEAES------ 586

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVY 679
                       +F  M      P+++TF+A+L+A +    +  A  L++E+  +D Q+ 
Sbjct: 587 ------------IFTMMKMAGCCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDYDIQLD 634

Query: 680 GVAHGLLM 687
            +A   LM
Sbjct: 635 TIACSALM 642



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 189/390 (48%), Gaps = 7/390 (1%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNT-- 227
            ++SKA+  F        R +   +  + +I  L +LG+ + A +IF + + E       
Sbjct: 262 AQYSKALSYFELMKGTNIRPDTTTR--NIVIYCLVKLGQCEKAIDIFNS-MREKRAECRP 318

Query: 228 -VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
            +  F+++I  Y  SG  +   +VF++M    L P +V+YNA+I A    G+  +  + +
Sbjct: 319 DIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMS-EEALSV 377

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F  +  +G+ PD +++ SLL+   R    + AR +FN M    +  ++ ++N L+DA   
Sbjct: 378 FKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGS 437

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +  A +++ EM    I PN+VT  T++    + G+  +   + S  K  GI L+ V+
Sbjct: 438 NGLLADAVKVLREMEQDGIHPNIVTICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVA 497

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
            N+ +  Y  +G +E+A+ +   M    +  ++VTY  L+ G  K  KY +    F  M 
Sbjct: 498 CNSAIGSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADMM 557

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              ++      S++I  YSK G   EA  IF   K AG   D++ ++A++ A        
Sbjct: 558 ELKIALTKEVCSSVICAYSKQGQITEAESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWG 617

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            A  L+ EM    I+ + +  ++++ AF +
Sbjct: 618 KACDLIQEMEDYDIQLDTIACSALMRAFNK 647



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 199/453 (43%), Gaps = 73/453 (16%)

Query: 170 GEWSKAIQCF-AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTV 228
           G+  KAI  F +   KR E + D     S +I +    G+V+  K +F T L EG   T+
Sbjct: 297 GQCEKAIDIFNSMREKRAECRPDIVTFTS-IIHLYSLSGQVENCKAVFSTMLAEGLTPTI 355

Query: 229 YAFSALISAYGRSGYCQEAISVF-----------------------------------NS 253
            +++ALI AY   G  +EA+SVF                                   N 
Sbjct: 356 VSYNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNM 415

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           MK+  LKPN+V++NA+IDA G  G+     V++  +M ++G+ P+ +T  +LLA C R G
Sbjct: 416 MKKAKLKPNVVSFNALIDAYGSNGL-LADAVKVLREMEQDGIHPNIVTICTLLAACGRCG 474

Query: 314 L-----------------------------------WEAARNLFNEMVHRGIDQDIFTYN 338
                                               +E A  L+N M    +  +  TY 
Sbjct: 475 QKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMRKMKVAPNSVTYT 534

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+   CK ++   A E  A+M    I+      S++I  Y+K G++ +A ++F+ MK  
Sbjct: 535 VLISGCCKMSKYGKAIEFFADMMELKIALTKEVCSSVICAYSKQGQITEAESIFTMMKMA 594

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   D +++  +L  Y     + +A  + +EME   I+ D +  +AL+  + K+G   +V
Sbjct: 595 GCCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDYDIQLDTIACSALMRAFNKRGNPSQV 654

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + E MK   +  +   +  ++   S    ++  + + +  + +     + L + L+  
Sbjct: 655 LILAEFMKEKEIPFSDAIFFEMVSACSLLRDWRTILNLMKLMEPSFSVVSIGLLNQLLHV 714

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           L ++G +ES + L  ++T  G   N  TY+ ++
Sbjct: 715 LGRSGKIESMMKLFYKITASGAEINFNTYSIML 747



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/302 (21%), Positives = 133/302 (44%), Gaps = 30/302 (9%)

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS-YNTVLSIYAKLGRFEEALLVCKEM 430
           +  +I    + G L+ +  +F  MK       R   YN ++ ++A+    ++A  +  EM
Sbjct: 110 FPRLIKEITQRGALEHSNLVFRWMKLQKNYCARTDMYNMMIRLHARHNLTDQARGLFFEM 169

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           +    + D+ TYNAL+  +G+ G++     + E M  + + P+  TY+ LI+     G +
Sbjct: 170 QEWRCKPDSETYNALINAHGRAGQWRWAMNIMEDMLREAIPPSRSTYNNLINACGSSGNW 229

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           +EA+++ ++  + G+  D+V ++ ++ A         A+S  + M    IRP+  T N +
Sbjct: 230 REALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQYSKALSYFELMKGTNIRPDTTTRNIV 289

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
           I    +    E  +D       K+ E       C  D              I  F  ++ 
Sbjct: 290 IYCLVKLGQCEKAIDIFNSMREKRAE-------CRPD--------------IVTFTSIIH 328

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
             +  G+ EN C+        VF  M    + P +V+++A++ A +     E+A  + ++
Sbjct: 329 LYSLSGQVEN-CK-------AVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKK 380

Query: 671 LR 672
           ++
Sbjct: 381 IK 382


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 242/511 (47%), Gaps = 37/511 (7%)

Query: 178 CFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISA 237
           C AF V + +         ++++  L ++G VDLA  I++  +  G    VY  + +I+A
Sbjct: 204 CEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINA 263

Query: 238 YGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP 297
             ++   +   S  + M+   + P++VTYN +I+A  + G+  +   E+ D M   G++P
Sbjct: 264 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL-LEEAFELMDSMSGKGLKP 322

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
              T+N+++    + G +  A+ + +EM+  G+  D  TYN LL   C+   M  A  I 
Sbjct: 323 CVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIF 382

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
            EMP++ + P++V++S +I   +K G LD AL  F +MK  G+  D V Y  ++  + + 
Sbjct: 383 DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 442

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G   EAL V  EM   G   D VTYN +L G  K+    E   +F +M    V P+  T+
Sbjct: 443 GVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 502

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           +TLI+ YSK G   +A+ +F    Q  LK DVV Y+ LID  CK   +E    L ++M  
Sbjct: 503 TTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMIS 562

Query: 538 EGIRPNVVTYNSIIDAF-------------------GRSATTECTVDDVERDLGKQKESA 578
             I PN ++Y  +I+ +                   G  AT   T + + +   +   + 
Sbjct: 563 RRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATI-ITCNTIVKGYCRAGNAV 621

Query: 579 NLDAMCSQD-DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
             D   S    K +   G T N +I  F           K+EN  R        +  KM 
Sbjct: 622 KADEFLSNMLLKGIVPDGITYNTLINGF----------IKEENMDRA-----FALVNKME 666

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
              + P+V+T++ ILN  SR    ++A +++
Sbjct: 667 NSGLLPDVITYNVILNGFSRQGRMQEAELIM 697



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 176/347 (50%), Gaps = 1/347 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+I +L + G +D A   F    N G       ++ LI  + R+G   EA+ V + M  
Sbjct: 398 SALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 457

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                ++VTYN +++   K  +      E+F +M   GV PD  TF +L+   S+ G   
Sbjct: 458 QGCVLDVVTYNTILNGLCKEKM-LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMN 516

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF  M+ R +  D+ TYNTL+D  CKG++M+   E+  +M ++ I PN ++Y  +I
Sbjct: 517 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 576

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY   G + +A  ++ EM   G     ++ NT++  Y + G   +A      M   GI 
Sbjct: 577 NGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIV 636

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +TYN L+ G+ K+   D    +  +M+   + P+++TY+ +++ +S+ G  +EA  I
Sbjct: 637 PDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELI 696

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             +  + G+  D   Y++LI+       ++ A  + DEM + G  P+
Sbjct: 697 MLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 188/367 (51%), Gaps = 6/367 (1%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGN---TVYAFSALISAYGRSGYCQEAISV 250
           +L  A   IL  + K  +++     +L   YGN       F  L+  Y ++   +E    
Sbjct: 147 RLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEA 206

Query: 251 FNSMKRYNLKPNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC 309
           F  +K   L  ++   N+++    K G VD     EI+ +++R+GVQ +  T N ++   
Sbjct: 207 FRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW--EIYQEVVRSGVQVNVYTLNIMINAL 264

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
            +    E  ++  ++M  +G+  D+ TYNTL++A C+   ++ AFE+M  M  K + P V
Sbjct: 265 CKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCV 324

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
            TY+ +I+G  K G+   A  +  EM  +G+  D  +YN +L    +     +A  +  E
Sbjct: 325 FTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDE 384

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M S G+  D V+++AL+G   K G  D+  + F  MK   ++P+ + Y+ LI  + + G+
Sbjct: 385 MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 444

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
             EA+++  E  + G   DVV Y+ +++ LCK  ++  A  L  EMT+ G+ P+  T+ +
Sbjct: 445 MSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 504

Query: 550 IIDAFGR 556
           +I+ + +
Sbjct: 505 LINGYSK 511



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 174/342 (50%), Gaps = 1/342 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ IF+   ++G    + +FSALI    ++G   +A+  F  MK   L P+ V Y  +I 
Sbjct: 378 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 437

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              + GV     +++ D+ML  G   D +T+N++L    +  +   A  LF EM  RG+ 
Sbjct: 438 GFCRNGV-MSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 496

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D +T+ TL++   K   M+ A  +   M  +N+ P+VVTY+T+IDG+ K   ++    +
Sbjct: 497 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 556

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           +++M    I  + +SY  +++ Y  +G   EA  +  EM   G     +T N ++ GY +
Sbjct: 557 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 616

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G   +       M    + P+ +TY+TLI+ + K      A  +  + + +GL  DV+ 
Sbjct: 617 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 676

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           Y+ +++   + G ++ A  ++ +M + G+ P+  TY S+I+ 
Sbjct: 677 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 718


>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
          Length = 702

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 148/589 (25%), Positives = 271/589 (46%), Gaps = 39/589 (6%)

Query: 165 ELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF-ETALNEG 223
           EL    EW+ A+  +A     +E   D   L   ++  LGR G+ D+  ++  E  L  G
Sbjct: 30  ELSGHWEWALALLRWA----SDEGAADAAAL-EMVVRALGREGQHDVVCDLLDEMPLPPG 84

Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV 283
               V A++ ++ A  R+G  + A+ +F  ++R  + P +VTYN V+D  G+ G  +  +
Sbjct: 85  SRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRI 144

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           V + ++M   GV+PD  T ++++A C R GL + A   F ++  RG    + TYN LL  
Sbjct: 145 VALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQV 204

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
             K      A  ++ EM      P+ VTY+ +   YA+AG  ++A      M   G+  +
Sbjct: 205 FGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPN 264

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +YNTV++ YA +GR +EAL +   M+ +G   +  TYN + G  GK+ ++  +  M E
Sbjct: 265 TFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLE 324

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M     +PN +T++T++ V  K G+     ++    K  G++     Y+ LI A  + G
Sbjct: 325 EMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCG 384

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
               A  + DEM   G  P + TYN++++                  L +Q + +   ++
Sbjct: 385 SRTYAFKMYDEMISSGFTPCLTTYNALLNV-----------------LSRQGDWSTAQSI 427

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
            S   K ++   + ++Q   +  Q  A+       E+           + ++++   I P
Sbjct: 428 VS---KMLKNGFKPNDQSYSLLLQCYAKGGNAAGIES-----------IEKEVYVGTIFP 473

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRL--FDNQVYGVAHGLLMGYRDNIWVQALSLF 701
           + V    ++ A  +C   E      +E++   +   +      L M  ++ ++ +A  +F
Sbjct: 474 SWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMF 533

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
           D +K    S     YN+L DM     +   A+ ++ + K  QV  +V S
Sbjct: 534 DSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVS 582



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 218/434 (50%), Gaps = 42/434 (9%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           Y  LL+  G  G +++A++     +K  E    Q    +   +     R G  + A    
Sbjct: 198 YNALLQVFGKAGNYTEALR----VLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCL 253

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           +T  ++G     + ++ +++AY   G   EA+++F+ MK+    PN+ TYN +    GK 
Sbjct: 254 DTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKK 313

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
              F  ++E+ ++M R+G  P+R+T+N++LAVC + G+ +    + N M   G++    T
Sbjct: 314 S-RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDT 372

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YNTL+ A  +      AF++  EM +   +P + TY+ +++  ++ G    A ++ S+M 
Sbjct: 373 YNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKML 432

Query: 397 FLGIGLDRVSYNTVLSIYAKLG-----------------------------------RFE 421
             G   +  SY+ +L  YAK G                                   R E
Sbjct: 433 KNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLE 492

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
                 +E+++ G + D V +N++L  Y K G Y +   MF+ +K   +SP+L+TY++L+
Sbjct: 493 GVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLM 552

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           D+Y+K     EA +I ++ K + +K DVV Y+ +I+  CK GL++ A  +L EM  +G+ 
Sbjct: 553 DMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMA 612

Query: 542 PNVVTYNSIIDAFG 555
           P VVTY++++  + 
Sbjct: 613 PCVVTYHTLVGGYA 626



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 174/340 (51%), Gaps = 1/340 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + M+++ G+ G  D    +     + G   +   ++ LISAYGR G    A  +++ M  
Sbjct: 339 NTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMIS 398

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P L TYNA+++   + G D+     I   ML+NG +P+  +++ LL   ++GG   
Sbjct: 399 SGFTPCLTTYNALLNVLSRQG-DWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAA 457

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
              ++  E+    I        TL+ A  K  +++   +   E+ A+   P++V +++M+
Sbjct: 458 GIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSML 517

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             YAK G    A  MF  +K  G+  D ++YN+++ +YAK     EA  + K+++SS ++
Sbjct: 518 AMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVK 577

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D V+YN ++ G+ KQG   E +R+  +M AD ++P ++TY TL+  Y+   ++ EA ++
Sbjct: 578 PDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREV 637

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
                   LK   + Y  ++D+ CK    + A   L E++
Sbjct: 638 VNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEIS 677


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 214/431 (49%), Gaps = 50/431 (11%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + SA+I  L + G+   A+N+F     +G    ++ ++++I  +  SG   +A  +   M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               + P++VTYNA+I+A  K G  F    E++D+ML  G+ P+ IT+NS++    +   
Sbjct: 317 LERKISPDVVTYNALINAFVKEG-KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 375

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +AA ++F  M  +G   D+FT+ TL+D  C   ++D   E++ EMP + +  N VTY+T
Sbjct: 376 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 435

Query: 375 MI-----------------------------------DGYAKAGRLDDALNMFSEMK--- 396
           +I                                   DG    G+L DAL MF  M+   
Sbjct: 436 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495

Query: 397 --------FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
                   F G+  D ++YN ++      G+F EA  + +EM   GI  D +TY++++ G
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             KQ + DE  +MF  M +   SPN++T++TLI+ Y K G   + +++F E  + G+ AD
Sbjct: 556 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 615

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV---D 565
            ++Y  LI    K G +  A+ +  EM   G+ P+ +T  +++  F      E  V   +
Sbjct: 616 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 675

Query: 566 DVERDLGKQKE 576
           D++  +G Q E
Sbjct: 676 DLQMSVGYQLE 686



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/498 (26%), Positives = 240/498 (48%), Gaps = 41/498 (8%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++ ++ R+ + DL  ++++    +     +Y+F+ LI  +        A+S F  + +  
Sbjct: 85  LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG 144

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
           L P++VT+  ++   C +  V     ++ F  M     +P+ +TF +L+  +C  G + E
Sbjct: 145 LHPDVVTFTTLLHGLCVEDRV--SEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-PAKNISPNVVTYSTM 375
           A   L + M+  G+     TY T++D +CK      A  ++ +M    +I PNVV YS +
Sbjct: 203 AVA-LLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID   K GR  DA N+F+EM+  GI  D  +YN+++  +   GR+ +A  + +EM    I
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VTYNAL+  + K+GK+ E   ++++M    + PN +TY+++ID + K      A  
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 381

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F      G   DV  ++ LID  C    ++  + LL EM + G+  N VTYN++I  F 
Sbjct: 382 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF- 440

Query: 556 RSATTECTVDDVER--DLGKQKESAN-----------LDAMCSQDDKDVQEAGRTDNQII 602
                 C V D+    DL +Q  S+            LD +C  D+  +++A      + 
Sbjct: 441 ------CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC--DNGKLKDALEMFKAMQ 492

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCILG------------VFQKMHKLKIKPNVVTFSA 650
           K    L A     G + +     IL I G            ++++M    I P+ +T+S+
Sbjct: 493 KSKMDLDASHPFNGVEPDVLTYNIL-ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551

Query: 651 ILNACSRCNSFEDASMLL 668
           +++   + +  ++A+ + 
Sbjct: 552 MIDGLCKQSRLDEATQMF 569



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 160/321 (49%), Gaps = 7/321 (2%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
            +  +++F DMLR+   P  + F  L+ V  R    +   +L+ +M  + I  DI+++N 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+   C  +++  A     ++    + P+VVT++T++ G     R+ +AL+ F +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
              + V++ T+++   + GR  EA+ +   M   G++   +TY  ++ G  K+G      
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 460 RMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            +  +M +   + PN++ YS +ID   K G + +A  +F E ++ G+  D+  Y+++I  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA----TTECTVDDVERDLGKQ 574
            C +G    A  LL EM +  I P+VVTYN++I+AF +        E   + + R +   
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 359

Query: 575 KESAN--LDAMCSQDDKDVQE 593
             + N  +D  C QD  D  E
Sbjct: 360 TITYNSMIDGFCKQDRLDAAE 380



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 153/320 (47%), Gaps = 32/320 (10%)

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A ++ ++M      P+VV +  ++    +  R D  ++++ +M+   I  D  S+N ++ 
Sbjct: 63  AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
            +    +   AL    ++   G+  D VT+  LL G   + +  E    F QM      P
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRP 182

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           N++T++TL++   + G   EA+ +     + GL+   + Y  ++D +CK G   SA++LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242

Query: 533 DEMTKEG-IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
            +M +   I PNVV Y++IID+  +               G+  ++ NL         ++
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKD--------------GRHSDAQNLFT-------EM 281

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
           QE G   +  +  +  ++      G+  +   +++L      Q+M + KI P+VVT++A+
Sbjct: 282 QEKGIFPD--LFTYNSMIVGFCSSGRWSD--AEQLL------QEMLERKISPDVVTYNAL 331

Query: 652 LNACSRCNSFEDASMLLEEL 671
           +NA  +   F +A+ L +E+
Sbjct: 332 INAFVKEGKFFEAAELYDEM 351



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 59/278 (21%), Positives = 120/278 (43%), Gaps = 35/278 (12%)

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P+++ +  L+ V  +       + ++++ ++  ++ D+  ++ LI   C    +  A+S 
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136

Query: 532 LDEMTKEGIRPNVVTYNSI-------------IDAFGRSATTECTVDDVERDL---GKQK 575
             ++TK G+ P+VVT+ ++             +D F +   T C  + V       G  +
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
           E   ++A+   D   + E G    QI   +G +V     +G        + +  L + +K
Sbjct: 197 EGRIVEAVALLD--RMMEDGLQPTQI--TYGTIVDGMCKKG--------DTVSALNLLRK 244

Query: 636 MHKLK-IKPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGY-R 690
           M ++  I PNVV +SAI+++  +     DA  L  E++   +F +      + +++G+  
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF--TYNSMIVGFCS 302

Query: 691 DNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
              W  A  L  E+     S     YNAL +     G+
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 211/414 (50%), Gaps = 38/414 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L   GK+  A  +F   +  G+   V +++ +I+   ++G    A+ VF  M++
Sbjct: 170 NTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQ 229

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
              KPN+VTYN +ID+  K  +     VE   +M+  G+ PD +T+N++L   CS G L 
Sbjct: 230 NRGKPNVVTYNTIIDSLCKDRL-VNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLN 288

Query: 316 EAARNLFNEMVHR-----------------------------------GIDQDIFTYNTL 340
           EA R LF EMV R                                   G + + +TYN L
Sbjct: 289 EATR-LFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNAL 347

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +D  C   QMD A +++  M  K  +PN+ +Y+ +I+GY K+ R+++A  + SEM    +
Sbjct: 348 MDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNL 407

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D V+Y+T++    ++GR  EAL + KEM SSG+  D + Y+ LL G+ K G  DE  +
Sbjct: 408 TPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALK 467

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + ++M    + PN++ Y+ LI      G  + A ++F +    G++ D+  Y+ +I  L 
Sbjct: 468 LLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLL 527

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           K GL + A     +M  +G  P+  +YN II  F ++  +   +  ++  +GK+
Sbjct: 528 KEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKR 581



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 190/355 (53%), Gaps = 1/355 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L RL  VD A ++       G       F+ LI+     G  +EA+ +FN M  
Sbjct: 135 NVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVW 194

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +PN+++YN VI+   K G +    V +F  M +N  +P+ +T+N+++    +  L  
Sbjct: 195 SGHEPNVISYNTVINGLCKNG-NTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVN 253

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A    +EMV RGI  D+ TYNT+L   C   Q++ A  +  EM  +N+ P+ VT++ ++
Sbjct: 254 EAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILV 313

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  K G + +A  +   M   G   +  +YN ++  Y    + +EA+ V   M   G  
Sbjct: 314 DGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCA 373

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +  +YN L+ GY K  + +E +R+  +M    ++P+ +TYSTL+    + G  +EA+ +
Sbjct: 374 PNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNL 433

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           F+E   +GL  D++ YS L+D  CK+G ++ A+ LL EM +  I+PN++ Y  +I
Sbjct: 434 FKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILI 488



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 186/336 (55%), Gaps = 5/336 (1%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G  + VY+ + LI+   R  +   A+SV   M +  ++P+ +T+N +I+  C +G +  K
Sbjct: 126 GVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKI--K 183

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
             V +F++M+ +G +P+ I++N+++  +C  G    A R +F +M       ++ TYNT+
Sbjct: 184 EAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVR-VFRKMEQNRGKPNVVTYNTI 242

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +D++CK   ++ A E ++EM  + I P+VVTY+T++ G+   G+L++A  +F EM    +
Sbjct: 243 IDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNV 302

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D V++N ++    K G   EA  V + M   G   +A TYNAL+ GY    + DE  +
Sbjct: 303 MPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIK 362

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +   M     +PNL +Y+ LI+ Y K     EA ++  E  +  L  D V YS L+  LC
Sbjct: 363 VLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLC 422

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           + G    A++L  EM   G+ P+++ Y+ ++D F +
Sbjct: 423 QVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCK 458



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 142/499 (28%), Positives = 233/499 (46%), Gaps = 53/499 (10%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
           +V  F   + +  +      A+S+ N M  + +  N+ + N +I+  C    VDF   V 
Sbjct: 95  SVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDF--AVS 152

Query: 286 IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +   M + G+QPD ITFN+L+  +C+ G + EA   LFNEMV  G + ++ +YNT+++ +
Sbjct: 153 VMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAV-GLFNEMVWSGHEPNVISYNTVINGL 211

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK     +A  +  +M      PNVVTY+T+ID   K   +++A+   SEM   GI  D 
Sbjct: 212 CKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDV 271

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V+YNT+L  +  LG+  EA  + KEM    +  D VT+N L+ G  K+G   E R + E 
Sbjct: 272 VTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSET 331

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M      PN  TY+ L+D Y       EA+++       G   ++  Y+ LI+  CK+  
Sbjct: 332 MTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKR 391

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAM 583
           +  A  LL EM+++ + P+ VTY++++          C V       G+ +E+ NL   M
Sbjct: 392 MNEAKRLLSEMSEKNLTPDTVTYSTLMQGL-------CQV-------GRPREALNLFKEM 437

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC-ILGVFQKMHKLKIK 642
           CS                    G L    A     +  C+   L   L + ++MH+ +IK
Sbjct: 438 CSS-------------------GLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIK 478

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFD 702
           PN++ ++ ++         E A  L  +L          A G+    R +IW   + +  
Sbjct: 479 PNIILYTILIRGMFIAGKLEVAKELFSKLS---------ADGI----RPDIWTYNVMIKG 525

Query: 703 EVKLMDSSTASAFYNALTD 721
            +K   S  A  F+  + D
Sbjct: 526 LLKEGLSDEAYEFFRKMED 544



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 149/268 (55%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F  M+R   +P  + F   L   ++   + +A +L N+M   G+  ++++ N L++ +C+
Sbjct: 84  FYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCR 143

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
            + +D A  +M +M    I P+ +T++T+I+G    G++ +A+ +F+EM + G   + +S
Sbjct: 144 LSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVIS 203

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNTV++   K G    A+ V ++ME +  + + VTYN ++    K    +E      +M 
Sbjct: 204 YNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMV 263

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + P+++TY+T++  +   G   EA ++F+E     +  D V ++ L+D LCK G+V 
Sbjct: 264 DRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVS 323

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            A  + + MT++G  PN  TYN+++D +
Sbjct: 324 EARCVSETMTEKGAEPNAYTYNALMDGY 351



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 154/327 (47%), Gaps = 3/327 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +L    + G+ ++A + F   V R    +      + ++  L + G V  A+ + ET
Sbjct: 274 YNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTV--TFNILVDGLCKEGMVSEARCVSET 331

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G     Y ++AL+  Y       EAI V   M      PNL +YN +I+   K   
Sbjct: 332 MTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSK- 390

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                  +  +M    + PD +T+++L+    + G    A NLF EM   G+  D+  Y+
Sbjct: 391 RMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYS 450

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            LLD  CK   +D A +++ EM  + I PN++ Y+ +I G   AG+L+ A  +FS++   
Sbjct: 451 ILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSAD 510

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI  D  +YN ++    K G  +EA    ++ME  G   D+ +YN ++ G+ +       
Sbjct: 511 GIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTA 570

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYS 485
            ++ ++M     S +  T+  L+D+ S
Sbjct: 571 IQLIDEMVGKRFSADSSTFQMLLDLES 597



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 45/243 (18%)

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R   V +   LG   K+ +Y     +  QM    V+ N+ + + LI+   +      A+ 
Sbjct: 93  RPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVS 152

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +  +  + G++ D + ++ LI+ LC  G ++ AV L +EM   G  PNV++YN++I+   
Sbjct: 153 VMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLC 212

Query: 556 RSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
           ++  T   V  V R + + +   N       +D++C   D+ V EA            + 
Sbjct: 213 KNGNTIMAV-RVFRKMEQNRGKPNVVTYNTIIDSLCK--DRLVNEA-----------VEF 258

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
           ++E   +G                        I P+VVT++ IL+         +A+ L 
Sbjct: 259 LSEMVDRG------------------------IPPDVVTYNTILHGFCSLGQLNEATRLF 294

Query: 669 EEL 671
           +E+
Sbjct: 295 KEM 297


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 218/434 (50%), Gaps = 44/434 (10%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKN--DQGKLASAMISILGRLGKVDLAKNIFETA 219
           +LR L + G+ S A+  F     RE  K         + MI+ L +  ++D A  + E  
Sbjct: 16  ILRGLCDAGQCSDAVLHF-----REMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEM 70

Query: 220 LNEGYGNTVYAFSALISAYGRS------------------------------GYCQ---- 245
           ++ G+   V++++ ++  + ++                              G C+    
Sbjct: 71  VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQV 130

Query: 246 -EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
            EA  V + M +   +PN++TY  ++D   + G D    VE+   M   G +P+ IT+N+
Sbjct: 131 DEACRVMDKMIQRGCQPNVITYGTLVDGFCRVG-DLDGAVELVRKMTERGYRPNAITYNN 189

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
           ++     G   ++A  LF EM   G    D+FTY+T++D++ K  ++D A  ++  M +K
Sbjct: 190 IMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSK 249

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
             SPNVVTYS+++ G  KAG+LD+A  +   M   G   + V+YNT++  + KLGR +EA
Sbjct: 250 GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 309

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
             + +EM   G + + VTY  LL  + K GK ++   + E M      PNL TY++L+D+
Sbjct: 310 YHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 369

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           + K    + A Q+     Q G   +VV Y+ +I  LCK   V   V LL++M      P+
Sbjct: 370 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 429

Query: 544 VVTYNSIIDAFGRS 557
           +VT+N+IIDA  ++
Sbjct: 430 IVTFNTIIDAMCKT 443



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 232/473 (49%), Gaps = 46/473 (9%)

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
           +G C +A+  F  M +    P+ VTYN +I+   K        + + ++M+ NG  P+  
Sbjct: 23  AGQCSDAVLHFREMSK-TCPPDSVTYNTMINGLSKSD-RLDDAIRLLEEMVDNGFAPNVF 80

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           ++N++L    +    E A  L  +MV RG   D+ +Y T+++ +CK  Q+D A  +M +M
Sbjct: 81  SYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKM 140

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
             +   PNV+TY T++DG+ + G LD A+ +  +M   G   + ++YN ++       + 
Sbjct: 141 IQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKL 200

Query: 421 EEALLVCKEMESSG-IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
           + AL + KEME SG    D  TY+ ++    K GK D+  R+ E M +   SPN++TYS+
Sbjct: 201 DSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSS 260

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           L+    K G   EA  + +   ++G   ++V Y+ +ID  CK G ++ A  LL+EM   G
Sbjct: 261 LLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 320

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ------KESANLDAMCSQDDKDVQE 593
            +PNVVTY  ++DAF +    E  +  VE  + K         ++ LD  C +D  +V+ 
Sbjct: 321 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD--EVER 378

Query: 594 AGRTDNQIIK-------------VFGQLVAEKAGQG------KKENRCRQEIL---CILG 631
           A +  + +I+             + G   A K  +G         N C  +I+    I+ 
Sbjct: 379 ACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIID 438

Query: 632 VFQKMHKLKI-------------KPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              K +++ I              PN+VT++++++   +   F+ A  LL E+
Sbjct: 439 AMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 491



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 203/379 (53%), Gaps = 8/379 (2%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           +LG++D A ++ E  ++ G    V  ++ L+ A+ + G  ++AI +   M      PNL 
Sbjct: 302 KLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF 361

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLF 322
           TYN+++D  C K  V+     ++   M++ G  P+ +++N+++A +C    + E    L 
Sbjct: 362 TYNSLLDMFCKKDEVE--RACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVL-LL 418

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            +M+      DI T+NT++DA+CK  ++D+A+E+   +     +PN+VTY++++ G  K+
Sbjct: 419 EQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKS 478

Query: 383 GRLDDALNMFSEM-KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            R D A  +  EM +  G   D ++YNTV+    K  R + A  +  +M S G+  D VT
Sbjct: 479 RRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVT 538

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y+ ++    K    DE   + E M  +   P  +TY TLID + K G   +A++I +   
Sbjct: 539 YSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLL 598

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G   DVV +S  ID L K G +  A  LL+ M + G+ P+ VTYN+++  F  ++ TE
Sbjct: 599 SKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTE 658

Query: 562 CTVD--DVERDLGKQKESA 578
             VD  +V R  G + ++A
Sbjct: 659 DAVDLFEVMRQCGCEPDNA 677



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 201/398 (50%), Gaps = 38/398 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L +L +VD A  + +  +  G    V  +  L+  + R G    A+ +   M  
Sbjct: 118 TTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE 177

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG-VQPDRITFNSLLAVCSRGGLW 315
              +PN +TYN ++     G       +++F +M  +G   PD  T+++++    + G  
Sbjct: 178 RGYRPNAITYNNIMHGLCSGR-KLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKV 236

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  L   MV +G   ++ TY++LL  +CK  ++D A  ++  M     SPN+VTY+T+
Sbjct: 237 DDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 296

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL----------- 424
           IDG+ K GR+D+A ++  EM   G   + V+Y  +L  + K G+ E+A+           
Sbjct: 297 IDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY 356

Query: 425 ------------LVCKEME--------SSGIRK----DAVTYNALLGGYGKQGKYDEVRR 460
                       + CK+ E        SS I+K    + V+YN ++ G  K  K  E   
Sbjct: 357 VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVL 416

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + EQM ++   P+++T++T+ID   K      A ++F   +++G   ++V Y++L+  LC
Sbjct: 417 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLC 476

Query: 521 KNGLVESAVSLLDEMT-KEGIRPNVVTYNSIIDAFGRS 557
           K+   + A  LL EMT K+G  P+++TYN++ID   +S
Sbjct: 477 KSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKS 514



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 183/356 (51%), Gaps = 2/356 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++    + GK + A  + E  + +GY   ++ +++L+  + +    + A  + +SM +
Sbjct: 329 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQ 388

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               PN+V+YN VI    K        V + + ML N   PD +TFN+++    +    +
Sbjct: 389 KGCVPNVVSYNTVIAGLCKA-TKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVD 447

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN-ISPNVVTYSTM 375
            A  LFN +   G   ++ TYN+L+  +CK  + D A  ++ EM  K   SP+++TY+T+
Sbjct: 448 IAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 507

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K+ R+D A  +F +M   G+  D V+Y+ V+S   K    +EA  V + M  +G 
Sbjct: 508 IDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGF 567

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
              A+TY  L+ G+ K G  D+   + + + +    P+++T+S  ID  SK G  ++A +
Sbjct: 568 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 627

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +     +AGL  D V Y+ L+   C     E AV L + M + G  P+  TY +++
Sbjct: 628 LLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 190/382 (49%), Gaps = 11/382 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT LL      G+   AI      V++    N      ++++ +  +  +V+ A  +  +
Sbjct: 328 YTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN--LFTYNSLLDMFCKKDEVERACQLLSS 385

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            + +G    V +++ +I+   ++    E + +   M   N  P++VT+N +IDA C    
Sbjct: 386 MIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 445

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR-GIDQDIFT 336
           VD  +  E+F+ +  +G  P+ +T+NSL+    +   ++ A  L  EM  + G   DI T
Sbjct: 446 VDIAY--ELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIIT 503

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YNT++D +CK  ++D A+++  +M +  ++P+ VTYS +I    K   +D+A N+   M 
Sbjct: 504 YNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELML 563

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G     ++Y T++  + K G  ++AL + + + S G   D VT++  +    K+G+  
Sbjct: 564 KNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLR 623

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           +   + E M    + P+ +TY+TL+  +      ++A+ +F   +Q G + D   Y+ L+
Sbjct: 624 QAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683

Query: 517 DALC-----KNGLVESAVSLLD 533
             L      K+ L E + S++D
Sbjct: 684 GHLVDKKSYKDLLAEVSKSMVD 705



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 198/419 (47%), Gaps = 44/419 (10%)

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M  +G+      + ++L  +C   Q   A     EM +K   P+ VTY+TMI+G +K+ R
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDR 59

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LDDA+ +  EM   G   +  SYNTVL  + K  R E AL + ++M   G   D V+Y  
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++ G  K  + DE  R+ ++M      PN++TY TL+D + + G    A+++ R+  + G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG-IRPNVVTYNSIIDAFGRSATTECT 563
            + + + Y+ ++  LC    ++SA+ L  EM + G   P+V TY++I+D+  +S      
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSG----K 235

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
           VDD  R          ++AM S+        G + N +   +  L+      GK +    
Sbjct: 236 VDDACR---------LVEAMVSK--------GCSPNVV--TYSSLLHGLCKAGKLDEA-- 274

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH 683
                   + Q+M +    PN+VT++ I++   +    ++A  LLEE+     Q   V +
Sbjct: 275 ------TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 328

Query: 684 GLLMGYRDNIWVQALSLFDEVKLMDSSTASAF------YNALTDMLWHFGQ-KRGAQLV 735
            +L+    + + +     D + L++      +      YN+L DM     + +R  QL+
Sbjct: 329 TVLL----DAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLL 383


>gi|422293946|gb|EKU21246.1| hypothetical protein NGA_2092600 [Nannochloropsis gaditana CCMP526]
          Length = 659

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 186/330 (56%), Gaps = 2/330 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  F+  I A G++   +EA+ V   M+   L+P+LV++N  +DA GK G  +   +E+F
Sbjct: 226 VVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAG-QYDLALELF 284

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            ++  +G  P+ +++N+ +  C R G+ + A  L  EM    +  D  +YNT++ A  K 
Sbjct: 285 TEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAKK 344

Query: 348 AQMDLAFEIMAEMP-AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
            Q   A E++AEM  A  + P++++Y+T +   AKAGR + A  + +E    G+  D VS
Sbjct: 345 NQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVS 404

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNTV+    + G + +AL +   ME  G+  D V++N  +    +  K+    ++  +M+
Sbjct: 405 YNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREME 464

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           A  ++PN+ +Y+  +D   + G ++ A+++  E +  G+ A+V  Y+A +DA C+ G V+
Sbjct: 465 ARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYTAAMDACCRGGAVD 524

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             + LL+EM  +G+ PNVV+Y   +DA  R
Sbjct: 525 RVLVLLEEMDGKGVEPNVVSYTIAMDAMNR 554



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 187/336 (55%), Gaps = 4/336 (1%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG-VDFKHVVEI 286
           + +F+  + A G++G    A+ +F  ++ +   PNLV+YN  I ACG+ G VD  H  E+
Sbjct: 261 LVSFNTAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAH--EL 318

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR-GIDQDIFTYNTLLDAIC 345
             +M    V+PD +++N+++A  ++   W+AA  L  EM    G+D D+ +YNT +    
Sbjct: 319 LREMQGLSVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCA 378

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  + + A E++ E   + + P+VV+Y+T++    +AG    AL++F  M+ +G+  DRV
Sbjct: 379 KAGRWERATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRV 438

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           S+NT +    +  +++ AL + +EME+  I  +  +Y   +   G+ G+++    + E+M
Sbjct: 439 SFNTAMHACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEEM 498

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           +   V  N+ TY+  +D   +GG     + +  E    G++ +VV Y+  +DA+ + G  
Sbjct: 499 EVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVEPNVVSYTIAMDAMNRVGKW 558

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + A ++L++M + G+R + V+Y + +   GR+   E
Sbjct: 559 DRASAVLEQMVQRGLRLDSVSYRTALSTAGRAGDEE 594



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 194/400 (48%), Gaps = 47/400 (11%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           D+   + + D  L   ++ D + F   +  C +   W  A  +  EM  RG+  D+ ++N
Sbjct: 209 DWTRALTVLDAPL---IEVDVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFN 265

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           T +DA+ K  Q DLA E+  E+     +PN+V+Y+T I    +AG +D A  +  EM+ L
Sbjct: 266 TAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGL 325

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM-ESSGIRKDAVTYNALLGGYGKQGKYDE 457
            +  D VSYNTV++ +AK  +++ AL +  EM E+ G+  D ++YN  +    K G+++ 
Sbjct: 326 SVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWER 385

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +  +     + P++++Y+T++    + G Y +A+ +F   ++ G+  D V ++  + 
Sbjct: 386 ATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMH 445

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER------DL 571
           A  +    ++A+ +L EM    I PNV +Y   +DA GR+   E  ++ +E         
Sbjct: 446 ACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPA 505

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
                +A +DA C          G  D  ++     L+ E  G+G               
Sbjct: 506 NVHTYTAAMDACC--------RGGAVDRVLV-----LLEEMDGKG--------------- 537

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                    ++PNVV+++  ++A +R   ++ AS +LE++
Sbjct: 538 ---------VEPNVVSYTIAMDAMNRVGKWDRASAVLEQM 568



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 178/366 (48%), Gaps = 4/366 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +T  ++  G    W +A+        R  R  D     +AM   LG+ G+ DLA  +F  
Sbjct: 229 FTMAIKACGQARRWREALGVLREMQARGLRP-DLVSFNTAM-DALGKAGQYDLALELFTE 286

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + G+   + +++  I A GR+G    A  +   M+  +++P+ V+YN V+ A  K   
Sbjct: 287 IEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAKKN- 345

Query: 279 DFKHVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            +K  +E+  +M    GV PD I++N+ + VC++ G WE A  L  E + +G+  D+ +Y
Sbjct: 346 QWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSY 405

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           NT++ A  +  +   A ++   M    ++P+ V+++T +    +A +   AL +  EM+ 
Sbjct: 406 NTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREMEA 465

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             I  +  SY   +    + G +E AL + +EME  G+  +  TY A +    + G  D 
Sbjct: 466 RSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYTAAMDACCRGGAVDR 525

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
           V  + E+M    V PN+++Y+  +D  ++ G +  A  +  +  Q GL+ D V Y   + 
Sbjct: 526 VLVLLEEMDGKGVEPNVVSYTIAMDAMNRVGKWDRASAVLEQMVQRGLRLDSVSYRTALS 585

Query: 518 ALCKNG 523
              + G
Sbjct: 586 TAGRAG 591



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 152/310 (49%), Gaps = 32/310 (10%)

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           I  +VV ++  I    +A R  +AL +  EM+  G+  D VS+NT +    K G+++ AL
Sbjct: 222 IEVDVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLAL 281

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +  E+E  G   + V+YN  +   G+ G  D    +  +M+   V P+ ++Y+T++  +
Sbjct: 282 ELFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAF 341

Query: 485 SKGGLYKEAMQIFREFKQA-GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           +K   +K A+++  E K+A G+  D++ Y+  +    K G  E A  LL E   +G++P+
Sbjct: 342 AKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPD 401

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           VV+YN+++ A GR+              G+  ++ +L  M       ++E G   +++  
Sbjct: 402 VVSYNTVMHACGRA--------------GEYLQALDLFGM-------MEEVGVAPDRVSF 440

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
                   +A + +            L + ++M    I PNV +++  ++AC R   +E 
Sbjct: 441 NTAMHACNRALKWQ----------AALQILREMEARSIAPNVKSYTIAVDACGRAGEWER 490

Query: 664 ASMLLEELRL 673
           A  L+EE+ +
Sbjct: 491 ALELMEEMEV 500


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 198/374 (52%), Gaps = 5/374 (1%)

Query: 207 GKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           G+V+ A N  +   N+ G+    Y F+ L++   ++G+ + AI + + M +    P++ T
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           YN+VI    K G + K  VE  D M+     P+ +T+N+L++   +    E A  L   +
Sbjct: 333 YNSVISGLCKLG-EVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             +GI  D+ T+N+L+  +C      +A E+  EM +K   P+  TY+ +ID     G+L
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D+ALNM  +M+  G     ++YNT++  + K  +  EA  +  EME  G+ +++VTYN L
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTL 511

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K  + ++  ++ +QM  +   P+  TY++L+  + +GG  K+A  I +     G 
Sbjct: 512 IDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-FGRSATTECTV 564
           + D+V Y  LI  LCK G VE A  LL  +  +GI      YN +I   F +  TTE   
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAI- 630

Query: 565 DDVERDLGKQKESA 578
            ++ R++ +Q E+A
Sbjct: 631 -NLFREMLEQNEAA 643



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 188/357 (52%), Gaps = 4/357 (1%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN-LKPNLVT 265
           G +D A  I E  +  G   +  + + ++  + + G  ++A++    M   +   P+  T
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNE 324
           +N +++   K G   KH +EI D ML+ G  PD  T+NS+++ +C  G + EA   L ++
Sbjct: 298 FNTLVNGLCKAG-HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFL-DQ 355

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+ R    +  TYNTL+  +CK  Q++ A E+   + +K I P+V T++++I G      
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
              A+ +F EM+  G   D  +YN ++      G+ +EAL + K+ME SG  +  +TYN 
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G+ K  K  E   +F++M+   VS N +TY+TLID   K    ++A Q+  +    G
Sbjct: 476 LIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEG 535

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            K D   Y++L+   C+ G ++ A  ++  MT  G  P++VTY ++I    ++   E
Sbjct: 536 QKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 183/356 (51%), Gaps = 4/356 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +++ L + G V  A  I +  L EGY   VY ++++IS   + G  +EA+   + M  
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMIT 358

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            +  PN VTYN +I   C +  V+     E+   +   G+ PD  TFNSL+         
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVE--EATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  LF EM  +G + D FTYN L+D++C   ++D A  ++ +M     + +V+TY+T+
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG+ KA ++ +A  +F EM+  G+  + V+YNT++    K  R E+A  +  +M   G 
Sbjct: 477 IDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQ 536

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D  TYN+LL  + + G   +   + + M ++   P+++TY TLI    K G  + A +
Sbjct: 537 KPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG-IRPNVVTYNSI 550
           + R  +  G+      Y+ +I  L +      A++L  EM ++    P+ V+Y  +
Sbjct: 597 LLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIV 652



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 148/621 (23%), Positives = 250/621 (40%), Gaps = 115/621 (18%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           LL  L ++ + S A++ F  A K+     +   L   ++  LGR G  D  + I E   N
Sbjct: 53  LLDSLRSQADDSAALRLFNLASKKPNFSPEPA-LYEEILLRLGRSGSFDDMRKILEDMKN 111

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFN----------------------------- 252
            G       F  LI +Y +     E + V +                             
Sbjct: 112 SGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLK 171

Query: 253 -------SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
                   M  + +KP++ T+N +I A  +     +  + + +DM   G+ PD  TF ++
Sbjct: 172 LVEIAHAKMSVWGIKPDVSTFNVLIKALCRAH-QLRPAILMLEDMPSYGLVPDEKTFTTI 230

Query: 306 L------------------------------------AVCSRGGLWEAARNLFNEMVHR- 328
           +                                      C  G + E A N   EM ++ 
Sbjct: 231 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRV-EDALNFIQEMSNQD 289

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   D +T+NTL++ +CK   +  A EIM  M  +   P+V TY+++I G  K G + +A
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           +    +M       + V+YNT++S   K  + EEA  + + + S GI  D  T+N+L+ G
Sbjct: 350 VEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
                 +     +FE+M++    P+  TY+ LID     G   EA+ + ++ + +G    
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
           V+ Y+ LID  CK   +  A  + DEM   G+  N VTYN++ID   +S   E       
Sbjct: 470 VITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE------- 522

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
                   S  +D M  +  K  +    T N ++  F      + G  KK          
Sbjct: 523 ------DASQLMDQMIMEGQKPDK---FTYNSLLTHFC-----RGGDIKKAA-------- 560

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL----FDNQVYG-VAH 683
              + Q M     +P++VT+  +++   +    E AS LL  +++         Y  V  
Sbjct: 561 --DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQ 618

Query: 684 GLLMGYRDNIWVQALSLFDEV 704
           GL   +R     +A++LF E+
Sbjct: 619 GL---FRKRKTTEAINLFREM 636



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 224/482 (46%), Gaps = 37/482 (7%)

Query: 247 AISVFN-SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A+ +FN + K+ N  P    Y  ++   G+ G  F  + +I +DM  +G +     F  L
Sbjct: 66  ALRLFNLASKKPNFSPEPALYEEILLRLGRSG-SFDDMRKILEDMKNSGCEMGTSPFLIL 124

Query: 306 LAVCSRGGLWEAARNLFNEMVHR-GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           +   ++  L +    + + M+   G+  D   YN +L+ +  G  + L     A+M    
Sbjct: 125 IESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWG 184

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           I P+V T++ +I    +A +L  A+ M  +M   G+  D  ++ T++  Y + G  + AL
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGAL 244

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDV 483
            + ++M   G     V+ N ++ G+ K+G+ ++     ++M   D   P+  T++TL++ 
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K G  K A++I     Q G   DV  Y+++I  LCK G V+ AV  LD+M      PN
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPN 364

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
            VTYN++I       +T C  + VE       E+  L  + +   K +     T N +I+
Sbjct: 365 TVTYNTLI-------STLCKENQVE-------EATELARVLTS--KGILPDVCTFNSLIQ 408

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
             G  +        + +R   E+      F++M     +P+  T++ ++++       ++
Sbjct: 409 --GLCLT-------RNHRVAMEL------FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDE 453

Query: 664 ASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
           A  +L+++ L       + +  L+ G+ + N   +A  +FDE+++   S  S  YN L D
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLID 513

Query: 722 ML 723
            L
Sbjct: 514 GL 515



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 4/109 (3%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            +IS L + G+V++A  +  +   +G   T +A++ +I    R     EAI++F  M   
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639

Query: 258 N-LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           N   P+ V+Y  V      GG   +  V+   ++L  G  P+   F+SL
Sbjct: 640 NEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE---FSSL 685


>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
 gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
          Length = 668

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 193/372 (51%), Gaps = 2/372 (0%)

Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
           RE R      L S +IS   R    D A  +  +A   G      A +ALISA G +G  
Sbjct: 220 RESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRV 279

Query: 245 QEAISVF-NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
            EA ++F        +KP    YNA++    + G   K+  ++ D+M + GV PD  T++
Sbjct: 280 AEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIG-SLKNAEQVLDEMSQCGVAPDEATYS 338

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
            L+   +R G WE+AR L  EM   G+    + ++ +L           AF ++ EM A 
Sbjct: 339 LLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS 398

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
            + P+   Y+ MID + K   L  A++ F++M+  GI  D V++NT++  + K GR + A
Sbjct: 399 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRA 458

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
             + +EM  S       TYN ++   G+Q  ++ V  M  +MK   + PN++TY+TL+DV
Sbjct: 459 AELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDV 518

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y + G YKEA+      K  GLK    +Y AL++A  + GL + A++++  M  +G+  +
Sbjct: 519 YGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVS 578

Query: 544 VVTYNSIIDAFG 555
           ++  NS+I+AFG
Sbjct: 579 ILVLNSLINAFG 590



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 191/365 (52%), Gaps = 10/365 (2%)

Query: 197 SAMISILGRLGKVDLAKNIF-ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           +A+IS LG  G+V  A+ +F E  L         A++AL+  Y R G  + A  V + M 
Sbjct: 267 TALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMS 326

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           +  + P+  TY+ ++DA  + G  ++    +  +M  +GV+P    F+ +LA     G W
Sbjct: 327 QCGVAPDEATYSLLVDAYTRAG-RWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDW 385

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAI----CKGAQMDLAFEIMAEMPAKNISPNVVT 371
           + A  +  EM   G+  D   YN ++D      C G  MD AF  M E   + I P+VVT
Sbjct: 386 QKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMD-AFNKMRE---EGIEPDVVT 441

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           ++T+ID + K GR D A  +F EM+         +YN ++++  +   +E    +  EM+
Sbjct: 442 WNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMK 501

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G+  + +TY  L+  YG+ G+Y E     E MKAD + P+   Y  L++ Y++ GL  
Sbjct: 502 EQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLAD 561

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            A+ + +  K  GL+  +++ ++LI+A  ++  V  A S+L  M + G+RP+V+TY +++
Sbjct: 562 HALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLM 621

Query: 552 DAFGR 556
            A  R
Sbjct: 622 KALIR 626



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/428 (21%), Positives = 188/428 (43%), Gaps = 69/428 (16%)

Query: 248 ISVFNSMKRYNLKPNLVTYNAVIDAC--GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           + + + ++ ++  P+L +Y+ ++ +    +   D   +  +  D+  + ++PD   F+ L
Sbjct: 175 LRLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDL 234

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-PAKN 364
           ++  +R  L +AA  L       G+         L+ A+    ++  A  +  E   A  
Sbjct: 235 ISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGE 294

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           I P    Y+ ++ GY + G L +A  +  EM   G+  D  +Y+ ++  Y + GR+E A 
Sbjct: 295 IKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
           ++ KEME+ G++  +  ++ +L G+  +G + +   +  +M+A  V P+   Y+ +ID +
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            K      AM  F + ++ G++ DVV ++ LIDA CK G  + A  L +EM +    P  
Sbjct: 415 GKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGT 474

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
            TYN +I+                  LG+Q+    ++AM S+    ++E G         
Sbjct: 475 TTYNIMINL-----------------LGEQEHWEGVEAMLSE----MKEQG--------- 504

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
                                               + PN++T++ +++   R   +++A
Sbjct: 505 ------------------------------------LVPNIITYTTLVDVYGRSGRYKEA 528

Query: 665 SMLLEELR 672
              +E ++
Sbjct: 529 IDCIEAMK 536



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 126/300 (42%), Gaps = 46/300 (15%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKN---DQGKLASAM 199
           +LK+ E        Y F  +L    +RG+W KA     FAV RE + +         + M
Sbjct: 356 LLKEMEADGVKPSSYVFSRILAGFRDRGDWQKA-----FAVLREMQASGVRPDRHFYNVM 410

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN- 258
           I   G+   +  A + F     EG    V  ++ LI A+ + G    A  +F  M+  N 
Sbjct: 411 IDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNC 470

Query: 259 ----------------------------------LKPNLVTYNAVIDACGKGGVDFKHVV 284
                                             L PN++TY  ++D  G+ G  +K  +
Sbjct: 471 PPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSG-RYKEAI 529

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +  + M  +G++P    +++L+   ++ GL + A N+   M   G++  I   N+L++A 
Sbjct: 530 DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAF 589

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
            +  ++  AF ++  M    + P+V+TY+T++    +  + D    ++ EM   G   DR
Sbjct: 590 GEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDR 649



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 166/403 (41%), Gaps = 90/403 (22%)

Query: 367 PNVVTYSTMIDGYAKAGRLDDAL---NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
           P++ +YS ++          DA     +  +++   +  D   ++ ++S +A+    + A
Sbjct: 188 PDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFARAALPDAA 247

Query: 424 LLVCKEMESSGI--RKDAVTYNALLGGYGKQGKYDEVRRMF-EQMKADCVSPNLLTYSTL 480
           L +    ++ G+  R +AVT  AL+   G  G+  E   +F E   A  + P    Y+ L
Sbjct: 248 LELLASAQAIGLTPRSNAVT--ALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNAL 305

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           +  Y + G  K A Q+  E  Q G+  D   YS L+DA  + G  ESA  LL EM  +G+
Sbjct: 306 LKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGV 365

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGK-QKESANLDAMCSQDDKDVQEAG-RTD 598
           +P+   ++ I+  F              RD G  QK  A L        +++Q +G R D
Sbjct: 366 KPSSYVFSRILAGF--------------RDRGDWQKAFAVL--------REMQASGVRPD 403

Query: 599 ----NQIIKVFGQLVAEKAGQGKKENRCRQEILCI---LGVFQKMHKLKIKPNVVTFSAI 651
               N +I  FG           K N       C+   +  F KM +  I+P+VVT++ +
Sbjct: 404 RHFYNVMIDTFG-----------KYN-------CLGHAMDAFNKMREEGIEPDVVTWNTL 445

Query: 652 LNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSST 711
           ++A   C                             G  D    +A  LF+E++  +   
Sbjct: 446 IDA--HCKG---------------------------GRHD----RAAELFEEMRESNCPP 472

Query: 712 ASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
            +  YN + ++L       G + ++ E K + +  N+ + + L
Sbjct: 473 GTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTL 515


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 208/387 (53%), Gaps = 11/387 (2%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           +V LA +I    L  GY        +L++ + R     +A+S+ + M     KP++V YN
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194

Query: 268 AVIDACGKGGVDFKHVVEIFD---DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           A+ID+  K     K V + FD   ++ R G++P+ +T+ +L+        W  A  L ++
Sbjct: 195 AIIDSLCKT----KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+ + I  ++ TY+ LLDA  K  ++  A E+  EM   +I P++VTYS++++G     R
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDR 310

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +D+A  MF  M   G   D VSYNT+++ + K  R E+ + + +EM   G+  + VTYN 
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G+ + G  D+ +  F QM    +SP++ TY+ L+      G  ++A+ IF + ++  
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           +  D+V Y+ +I  +CK G VE A SL   ++ +G++P++VTY +++        T+  +
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL----CTKGLL 486

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDV 591
            +VE    K K+   +   C+  D D+
Sbjct: 487 HEVEALYTKMKQEGLMKNDCTLSDGDI 513



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 192/349 (55%), Gaps = 1/349 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++++   R  +V  A ++ +  +  GY   + A++A+I +  ++    +A   F  ++R 
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            ++PN+VTY A+++        +     +  DM++  + P+ IT+++LL    + G    
Sbjct: 220 GIRPNVVTYTALVNGLCNSS-RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A+ LF EMV   ID DI TY++L++ +C   ++D A ++   M +K    +VV+Y+T+I+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+ KA R++D + +F EM   G+  + V+YNT++  + + G  ++A     +M+  GI  
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  TYN LLGG    G+ ++   +FE M+   +  +++TY+T+I    K G  +EA  +F
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
                 GLK D+V Y+ ++  LC  GL+    +L  +M +EG+  N  T
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 183/349 (52%), Gaps = 9/349 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I  L +  +V+ A + F+    +G    V  ++AL++    S    +A  + + M +
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN++TY+A++DA  K G       E+F++M+R  + PD +T++SL+         +
Sbjct: 254 KKITPNVITYSALLDAFVKNG-KVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRID 312

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +F+ MV +G   D+ +YNTL++  CK  +++   ++  EM  + +  N VTY+T+I
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+ +AG +D A   FS+M F GI  D  +YN +L      G  E+AL++ ++M+   + 
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTY  ++ G  K GK +E   +F  +    + P+++TY+T++      GL  E   +
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           + + KQ GL  +        D    +G +  +  L+ +M   G  P+++
Sbjct: 493 YTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPSLL 533



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 155/284 (54%)

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +     +++F DM+++   P  + FN LL+   +   ++   +L  +M   GI  D++T+
Sbjct: 64  IKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N +++  C   Q+ LA  I+ +M      P+ VT  ++++G+ +  R+ DA+++  +M  
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           +G   D V+YN ++    K  R  +A    KE+E  GIR + VTY AL+ G     ++ +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             R+   M    ++PN++TYS L+D + K G   EA ++F E  +  +  D+V YS+L++
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVN 303

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            LC +  ++ A  + D M  +G   +VV+YN++I+ F ++   E
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 151/321 (47%), Gaps = 40/321 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L N   WS A +  +  +K++   N                            
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPN---------------------------- 259

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
                    V  +SAL+ A+ ++G   EA  +F  M R ++ P++VTY+++++  C    
Sbjct: 260 ---------VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDR 310

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D  +  ++FD M+  G   D +++N+L+    +    E    LF EM  RG+  +  TY
Sbjct: 311 IDEAN--QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           NTL+    +   +D A E  ++M    ISP++ TY+ ++ G    G L+ AL +F +M+ 
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             + LD V+Y TV+    K G+ EEA  +   +   G++ D VTY  ++ G   +G   E
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488

Query: 458 VRRMFEQMKADCVSPNLLTYS 478
           V  ++ +MK + +  N  T S
Sbjct: 489 VEALYTKMKQEGLMKNDCTLS 509



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 31/232 (13%)

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           V +N LL    K  KYD V  + ++M+   +  +L T++ +I+ +        A+ I  +
Sbjct: 86  VDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGK 145

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             + G + D V   +L++  C+   V  AVSL+D+M + G +P++V YN+IID+  ++  
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
                D                       K+++  G   N +   +  LV       +  
Sbjct: 206 VNDAFDFF---------------------KEIERKGIRPNVV--TYTALVNGLCNSSRWS 242

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +  R        +   M K KI PNV+T+SA+L+A  +     +A  L EE+
Sbjct: 243 DAAR--------LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286


>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 673

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 200/399 (50%), Gaps = 3/399 (0%)

Query: 159 YTFLLRELGN-RGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           Y+ LL  L N R     AI        R+ R      L S +IS   R    D A  +  
Sbjct: 198 YSHLLASLLNTRDPPDAAILERLLGDLRDSRLEPDAPLFSDLISAFARAALPDAALELLA 257

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRYNLKPNLVTYNAVIDACGKG 276
           +A   G      A +ALISA G +G   EA ++F        +KP    YNA++    K 
Sbjct: 258 SAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKI 317

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G   K+   + D+M   GV PD  T++ L+   +R G WE+AR L  EM   G+    + 
Sbjct: 318 G-SLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYV 376

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           ++ +L           AF ++ EM A  + P+   Y+ MID + K   L  A+++F+ M+
Sbjct: 377 FSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMR 436

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             GI  D V++NT++  + K GR + A+ + KEM  S       TYN ++   G+Q ++ 
Sbjct: 437 GEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWV 496

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
            V  M  +MK   + PN++TY+TL+DVY + G YKEA+      K  GLK    +Y AL+
Sbjct: 497 GVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALV 556

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +A  + GL + A++++  M  +G+  + V  NS+I+AFG
Sbjct: 557 NAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFG 595



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 187/361 (51%), Gaps = 2/361 (0%)

Query: 197 SAMISILGRLGKVDLAKNIF-ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           +A+IS LG  G+V  A+ +F E  L         A++AL+  Y + G  + A  V + M 
Sbjct: 272 TALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMS 331

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              + P+  TY+ ++DA  + G  ++    +  +M  +GV+P    F+ +LA     G W
Sbjct: 332 ECGVAPDEATYSLLVDAYTRAG-RWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDW 390

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  +  EM   G+  D   YN ++D   K   +  A ++   M  + I P+VVT++T+
Sbjct: 391 QKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTL 450

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID + K GR D A+ +F EM+         +YN ++++  +  R+     +  EM+  G+
Sbjct: 451 IDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGL 510

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + +TY  L+  YG+ G+Y E     E MKAD + P+   Y  L++ Y++ GL   A+ 
Sbjct: 511 VPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALN 570

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           + +  +  GL+A  V+ ++LI+A  ++  V  A S+L  M +   RP+V+TY +++ A  
Sbjct: 571 VVKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALI 630

Query: 556 R 556
           R
Sbjct: 631 R 631



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 207/442 (46%), Gaps = 36/442 (8%)

Query: 250 VFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC 309
           +   ++   L+P+   ++ +I A  +  +     +E+       G+ P      +L++  
Sbjct: 220 LLGDLRDSRLEPDAPLFSDLISAFARAALP-DAALELLASAQAIGLTPRSNAVTALISAL 278

Query: 310 SRGGLWEAARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
              G    A  LF E    G I      YN LL    K   +  A  ++ EM    ++P+
Sbjct: 279 GIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPD 338

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
             TYS ++D Y +AGR + A  +  EM+  G+      ++ +L+ +   G +++A  V +
Sbjct: 339 EATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLR 398

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
           EM +SG++ D   YN ++  +GK         +F +M+ + + P+++T++TLID + KGG
Sbjct: 399 EMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGG 458

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
            +  AM++F+E +++        Y+ +I+ L +        +++ EM ++G+ PN++TY 
Sbjct: 459 RHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYT 518

Query: 549 SIIDAFGRSATTECTVDDVE--RDLGKQKESANLDAMCSQDDK--------DVQEAGRTD 598
           +++D +GRS   +  +D +E  +  G +       A+ +   +        +V +A R D
Sbjct: 519 TLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRAD 578

Query: 599 ---------NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
                    N +I  FG            E+R    ++    V Q M +   +P+V+T++
Sbjct: 579 GLEASTVVLNSLINAFG------------EDR---RVVEAFSVLQFMKENDFRPDVITYT 623

Query: 650 AILNACSRCNSFEDASMLLEEL 671
            ++ A  R   F+   ++ EE+
Sbjct: 624 TLMKALIRVEQFDKVPVIYEEM 645



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 165/323 (51%), Gaps = 5/323 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++    R G+ + A+ + +    +G   + Y FS +++ +   G  Q+A +V   M  
Sbjct: 343 SLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHA 402

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P+   YN +ID  GK      H +++F+ M   G++PD +T+N+L+    +GG  +
Sbjct: 403 SGVQPDRHFYNVMIDTFGKYNC-LGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHD 461

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF EM          TYN +++ + +  +      +M+EM  + + PN++TY+T++
Sbjct: 462 CAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLV 521

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y ++GR  +A++    MK  G+      Y+ +++ YA+ G  + AL V K M + G+ 
Sbjct: 522 DVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLE 581

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              V  N+L+  +G+  +  E   + + MK +   P+++TY+TL+    +   + +   I
Sbjct: 582 ASTVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVI 641

Query: 497 FREFKQAGL----KADVVLYSAL 515
           + E   +G     KA  +L SAL
Sbjct: 642 YEEMITSGCAPDRKARAMLRSAL 664



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 180/380 (47%), Gaps = 35/380 (9%)

Query: 297 PDRITFNSLLA-VCSRGGLWEAA--RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           PD  +++ LLA + +     +AA    L  ++    ++ D   ++ L+ A  + A  D A
Sbjct: 193 PDLASYSHLLASLLNTRDPPDAAILERLLGDLRDSRLEPDAPLFSDLISAFARAALPDAA 252

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV-SYNTVLS 412
            E++A   A  ++P     + +I     AGR+ +A  +F E    G    R  +YN +L 
Sbjct: 253 LELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLK 312

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
            Y K+G  + A  V  EM   G+  D  TY+ L+  Y + G+++  R + ++M+AD V P
Sbjct: 313 GYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKP 372

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           +   +S ++  +   G +++A  + RE   +G++ D   Y+ +ID   K   +  A+ + 
Sbjct: 373 SSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVF 432

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQ 592
           + M  EGI P+VVT+N++IDA  +    +C ++     L K+   +N    C        
Sbjct: 433 NRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAME-----LFKEMRESN----CPPGTT--- 480

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
               T N +I + G+               ++  + +  +  +M +  + PN++T++ ++
Sbjct: 481 ----TYNIMINLLGE---------------QERWVGVETMMSEMKEQGLVPNIITYTTLV 521

Query: 653 NACSRCNSFEDASMLLEELR 672
           +   R   +++A   +E ++
Sbjct: 522 DVYGRSGRYKEAIDCIEAMK 541



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 3/141 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+   G  G + +AI C   A+K +  K     +  A+++   + G  D A N+ + 
Sbjct: 517 YTTLVDVYGRSGRYKEAIDCIE-AMKADGLKPSP-TMYHALVNAYAQRGLADHALNVVKA 574

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G   +    ++LI+A+G      EA SV   MK  + +P+++TY  ++ A  +   
Sbjct: 575 MRADGLEASTVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVE- 633

Query: 279 DFKHVVEIFDDMLRNGVQPDR 299
            F  V  I+++M+ +G  PDR
Sbjct: 634 QFDKVPVIYEEMITSGCAPDR 654


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 231/496 (46%), Gaps = 37/496 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S MI+   R  K+ LA +     +  GY      FS LI+     G   EA+ + + M  
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              KP L+T NA+++  C  G V     V + D M+  G QP+ +T+  +L V  + G  
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKV--SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  L  +M  R I  D   Y+ ++D +CK   +D AF +  EM  K    +++ Y+T+
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G+  AGR DD   +  +M    I  D V+++ ++  + K G+  EA  + KEM   GI
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VTY +L+ G+ K+ + D+   M + M +    PN+ T++ LI+ Y K  L  + ++
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +FR+    G+ AD V Y+ LI   C+ G +E A  L  EM    +RP++V+Y  ++D   
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468

Query: 556 RSATTECTVDDVER--------DLG-----------KQKESANLDAMCSQDDKDVQEAGR 596
            +   E  ++  E+        D+G             K     D  CS   K V+   +
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
           T N +I           G  KK +    ++L     F+KM +    PN  T++ ++ A  
Sbjct: 529 TYNIMI----------GGLCKKGSLSEADLL-----FRKMEEDGHSPNGCTYNILIRAHL 573

Query: 657 RCNSFEDASMLLEELR 672
                  ++ L+EE++
Sbjct: 574 GEGDATKSAKLIEEIK 589



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 193/397 (48%), Gaps = 5/397 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           Y  +L+ +   G+ + A++      K EERK     +  S +I  L + G +D A N+F 
Sbjct: 215 YGPVLKVMCKSGQTALAMELLR---KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
               +G+   +  ++ LI  +  +G   +   +   M +  + P++V ++A+ID   K G
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              +   E+  +M++ G+ PD +T+ SL+    +    + A ++ + MV +G   +I T+
Sbjct: 332 -KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF 390

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L++  CK   +D   E+  +M  + +  + VTY+T+I G+ + G+L+ A  +F EM  
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             +  D VSY  +L      G  E+AL + +++E S +  D   YN ++ G     K D+
Sbjct: 451 RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +F  +    V P++ TY+ +I    K G   EA  +FR+ ++ G   +   Y+ LI 
Sbjct: 511 AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIR 570

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           A    G    +  L++E+ + G   +  T   ++D  
Sbjct: 571 AHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 156/306 (50%), Gaps = 3/306 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V AFSALI  + + G  +EA  +   M +  + P+ VTY ++ID  C +  +D  +   +
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN--HM 374

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
            D M+  G  P+  TFN L+    +  L +    LF +M  RG+  D  TYNTL+   C+
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++++A E+  EM ++ + P++V+Y  ++DG    G  + AL +F +++   + LD   
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN ++       + ++A  +   +   G++ D  TYN ++GG  K+G   E   +F +M+
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            D  SPN  TY+ LI  +   G   ++ ++  E K+ G   D      ++D L    L +
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKK 614

Query: 527 SAVSLL 532
           S + +L
Sbjct: 615 SFLDML 620



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 146/281 (51%), Gaps = 2/281 (0%)

Query: 276 GGVDFKH--VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G VD K    V++F +M R+  +P  I F+ L +V +R   ++   +L  +M  +GI  +
Sbjct: 47  GIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHN 106

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++T + +++  C+  ++ LAF  M ++      P+ VT+ST+I+G    GR+ +AL +  
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD 166

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M  +G     ++ N +++     G+  +A+L+   M  +G + + VTY  +L    K G
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           +      +  +M+   +  + + YS +ID   K G    A  +F E +  G KAD+++Y+
Sbjct: 227 QTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYT 286

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            LI   C  G  +    LL +M K  I P+VV ++++ID F
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 97/200 (48%), Gaps = 7/200 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I     LGK+++AK +F+  ++      + ++  L+     +G  ++A+ +F  +++
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
             ++ ++  YN +I   C    VD     ++F  +   GV+PD  T+N ++  +C +G L
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVD--DAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA   LF +M   G   +  TYN L+ A         + +++ E+     S +  T   
Sbjct: 544 SEADL-LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM 602

Query: 375 MIDGYAKAGRLDDA-LNMFS 393
           ++D  +  GRL  + L+M S
Sbjct: 603 VVDMLSD-GRLKKSFLDMLS 621


>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 855

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 144/535 (26%), Positives = 259/535 (48%), Gaps = 47/535 (8%)

Query: 199 MISILGRLGKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           +I  L + G ++    +F    N+  Y      ++ +I  + R     +A  +F  M++ 
Sbjct: 120 LIRELTQRGSIEHCNLVFSWMKNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKC 179

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             KP+  TYNA+I+A G+ G  ++  + I DDMLR  + P R T+N+L+  C   G W+ 
Sbjct: 180 RCKPDAETYNALINAHGRAG-QWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKE 238

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A N+  +M   G+  D+ T+N +L A   G Q   A      +   +I P+  T++ +I 
Sbjct: 239 ALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIH 298

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGL--DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
              K  + D A+++F+ MK        D V++ +++ +Y+  G  E        M + G+
Sbjct: 299 CLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGL 358

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + V+YNALLG Y  +G  +E  ++F ++K +   P++++Y++L++ Y +    ++A +
Sbjct: 359 KPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKARE 418

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           IF+  K+  LK ++V Y+ALIDA   NGL+E A+ +L EM ++ I PNVV+  +++ A G
Sbjct: 419 IFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACG 478

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
           R                           C Q  K        + + IK+    VA  +  
Sbjct: 479 R---------------------------CGQKVKIDTVLSAAEMRGIKL--NTVAYNSAI 509

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE---LR 672
           G   N    E    + ++  M K KIK + VT++ +++ C + + F +A   +EE   L+
Sbjct: 510 GSYIN--VGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLK 567

Query: 673 L-FDNQVYGVAHGLLMGYRDNI-----WVQALSLFDEVKLMDSSTASAFYNALTD 721
           L    +VY     ++  Y          ++A S F+ +K +  S     Y A+ D
Sbjct: 568 LPMSKEVYS---SIICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTAMLD 619



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 188/394 (47%), Gaps = 40/394 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A++      G  + A  +F      G+   V ++++L++AYGRS   Q+A  +F  +KR
Sbjct: 366 NALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKR 425

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            NLKPN+V+YNA+IDA G  G+  +  +EI  +M ++ + P+ ++  +LLA C R G   
Sbjct: 426 NNLKPNIVSYNALIDAYGSNGL-LEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKV 484

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               + +    RGI  +   YN+ + +     + D A ++   M  K I  + VTY+ +I
Sbjct: 485 KIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLI 544

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK----LGRFEEALLVCKEMES 432
            G  K  +  +AL+   EM  L + + +  Y++++  Y+K    LG+  EA      M+S
Sbjct: 545 SGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKS 604

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G   D VTY A+L  Y    K++++  +FE+M+ + V  + +  + L+  ++KGG    
Sbjct: 605 LGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQPGR 664

Query: 493 AMQIFREFKQAGL----------------------KADVVLY-------------SALID 517
            + + +  ++  +                        D++ Y             +  ++
Sbjct: 665 VLSLAQSMREKDIPLSDTIFFEMVSACGLLHDWKTAVDMIKYMEPSLPVISSGCLNLFLN 724

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +L K+G +E  + L  +M   G   N  TY+ ++
Sbjct: 725 SLGKSGKIEIMLKLFFKMLASGAEVNFNTYSILL 758



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 196/423 (46%), Gaps = 21/423 (4%)

Query: 149 FEFKLC----GADDYTFLLRELGNRGEWSKAIQCF------AFAVKREERKNDQGKLASA 198
           FE + C     A+ Y  L+   G  G+W  A+         A    R    N        
Sbjct: 174 FEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNN-------- 225

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+  G  G    A N+ +   + G G  +   + +++A+       +A+S F  +K  +
Sbjct: 226 LINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTH 285

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML--RNGVQPDRITFNSLLAVCSRGGLWE 316
           ++P+  T+N +I  C      +   V+IF+ M   ++   PD +TF S++ + S  G  E
Sbjct: 286 IRPDTTTHNIIIH-CLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIE 344

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
                FN M+  G+  +I +YN LL A       + A ++  E+      P+VV+Y++++
Sbjct: 345 NCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLL 404

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           + Y ++ +   A  +F  +K   +  + VSYN ++  Y   G  E+A+ + +EME   I 
Sbjct: 405 NAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIH 464

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + V+   LL   G+ G+  ++  +    +   +  N + Y++ I  Y   G Y +A+ +
Sbjct: 465 PNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDL 524

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           +   ++  +K+D V Y+ LI   CK      A+S ++EM    +  +   Y+SII A+ +
Sbjct: 525 YNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSK 584

Query: 557 SAT 559
            A+
Sbjct: 585 QAS 587


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 194/355 (54%), Gaps = 7/355 (1%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISV----FNSMKRY--NLKP 261
           ++  A  +F      G       +  LI    ++G    A+ +     N   +Y  N KP
Sbjct: 176 RISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKP 235

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
            ++TY+ +ID   K G +     E+F++M   G+ PD I++++L+      G W+ +++L
Sbjct: 236 GVITYSIIIDGLCKVGRE-DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHL 294

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F+EMV +G+  D+ T++ L+D +CK  ++  A +++  M  + I PN++TY+++IDG+  
Sbjct: 295 FDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCM 354

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G L+ A  +F  M   G+  D +SY T+++ Y K  + +EA+ +  EM   G   +  T
Sbjct: 355 VGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTT 414

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  LL G  ++GK  + +++F  MK   VS N   Y   +D   K     EAM++F E K
Sbjct: 415 YGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELK 474

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
               K ++  YS LID LCK G +E+A  L +++++EG++P+VVTYN +I  F +
Sbjct: 475 SYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCK 529



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 225/445 (50%), Gaps = 20/445 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L++ L      S+A + F    K     N        +I  L + G V++A  + + 
Sbjct: 164 YTTLIKGLCMEHRISEATRLFLRMQKLGCTPN--AVTYGTLIKGLCQTGNVNIALKLHKE 221

Query: 219 ALNEG--YGNT----VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
            LN+   YG      V  +S +I    + G   EA  +F  MK   + P++++Y+ +I  
Sbjct: 222 MLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHG 281

Query: 273 -CGKGGVD-FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
            C  G  D  KH   +FD+M+  GVQPD +TF+ L+    + G    A+ L   M+ RGI
Sbjct: 282 FCCAGKWDQSKH---LFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGI 338

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             ++ TYN+L+D  C    ++ A E+   MP+K + P+ ++Y+T+I+GY K  ++ +A+N
Sbjct: 339 VPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMN 398

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +++EM  +G   +  +Y T+L    + G+  +A  +   M++ G+  ++  Y   L G  
Sbjct: 399 LYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLC 458

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K     E   +F ++K+     N+  YS LID   K G  + A ++F +  Q GL+ DVV
Sbjct: 459 KNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVV 518

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV----DD 566
            Y+ +I   CK G V++A  L ++M + G  P+++ YN+++  F      E  +      
Sbjct: 519 TYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKM 578

Query: 567 VERDLGKQKESANL--DAMCSQDDK 589
           V++D+     S  +  D +C +D+K
Sbjct: 579 VQKDVSPNAASCTIVVDMLC-KDEK 602



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 256/522 (49%), Gaps = 41/522 (7%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           + +F+ L+    +  +  +  S++N M+   L P+L T  +++  C          +   
Sbjct: 91  ISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTL-SILANCLCNVNRVSEALAAM 149

Query: 288 DDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             +LR G  P+ +T+ +L+  +C    + EA R LF  M   G   +  TY TL+  +C+
Sbjct: 150 AGILRRGYIPNVVTYTTLIKGLCMEHRISEATR-LFLRMQKLGCTPNAVTYGTLIKGLCQ 208

Query: 347 GAQMDLAFEIMAEMP------AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
              +++A ++  EM         N  P V+TYS +IDG  K GR D+A  +F EMK  G+
Sbjct: 209 TGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGM 268

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D +SY+T++  +   G+++++  +  EM   G++ D VT++ L+    K+GK  E ++
Sbjct: 269 IPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKK 328

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + E M    + PNL+TY++LID +   G    A ++F      GL+ D + Y+ LI+  C
Sbjct: 329 LLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYC 388

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE---S 577
           K   V+ A++L +EM + G  PNV TY +++    +       V D ++  G  K    S
Sbjct: 389 KTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGK----VGDAKKLFGVMKTYGVS 444

Query: 578 AN-------LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
           AN       LD +C  D   + EA       +++F +L +       +   C  + LC  
Sbjct: 445 ANSQIYGIFLDGLCKNDC--LFEA-------MELFNELKSYNFKLNIENYSCLIDGLCKA 495

Query: 631 G-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH 683
           G       +F+K+ +  ++P+VVT++ +++   +    ++A++L E++         +A+
Sbjct: 496 GKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAY 555

Query: 684 G-LLMGYRD-NIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
             LL G+ + N   + + L  ++   D S  +A    + DML
Sbjct: 556 NTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDML 597



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 223/471 (47%), Gaps = 45/471 (9%)

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C  G +        FD M+R+   P   +FN LL   ++   +    +L+NEM   G+  
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D+FT + L + +C   ++  A   MA +  +   PNVVTY+T+I G     R+ +A  +F
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG------IRKDAVTYNALL 446
             M+ LG   + V+Y T++    + G    AL + KEM +         +   +TY+ ++
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G  K G+ DE + +FE+MKA  + P++++YSTLI  +   G + ++  +F E    G++
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            D+V +S LID LCK G V  A  LL+ M + GI PN++TYNS+ID F       C V D
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGF-------CMVGD 357

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
           +         ++  +   S   K ++    +   +I  + +    K              
Sbjct: 358 L---------NSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEA------------ 396

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYGV- 681
              + ++ +M ++   PNV T+  +L    +     DA  L   ++ +    ++Q+YG+ 
Sbjct: 397 ---MNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIF 453

Query: 682 AHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
             GL    +++   +A+ LF+E+K  +       Y+ L D L   G+   A
Sbjct: 454 LDGLC---KNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETA 501



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 190/384 (49%), Gaps = 15/384 (3%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-----SAMISILGRLGKV 209
           G   Y+ ++  L   G   +A + F       E    QG +      S +I      GK 
Sbjct: 236 GVITYSIIIDGLCKVGREDEAKELF-------EEMKAQGMIPDVISYSTLIHGFCCAGKW 288

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
           D +K++F+  +++G    +  FS LI    + G   EA  +   M +  + PNL+TYN++
Sbjct: 289 DQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSL 348

Query: 270 IDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           ID  C  G  D     E+F  M   G++PD I++ +L+    +    + A NL+NEM+  
Sbjct: 349 IDGFCMVG--DLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQV 406

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   ++ TY TLL  + +  ++  A ++   M    +S N   Y   +DG  K   L +A
Sbjct: 407 GKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEA 466

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           + +F+E+K     L+  +Y+ ++    K G+ E A  + +++   G++ D VTYN ++ G
Sbjct: 467 MELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHG 526

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           + K G+ D    +FE+M+ +  +P+++ Y+TL+  + +G   +E +++  +  Q  +  +
Sbjct: 527 FCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPN 586

Query: 509 VVLYSALIDALCKNGLVESAVSLL 532
               + ++D LCK+   +  V LL
Sbjct: 587 AASCTIVVDMLCKDEKYKKFVDLL 610



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 3/134 (2%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           +S LI    ++G  + A  +F  + +  L+P++VTYN +I   C  G VD  ++  +F+ 
Sbjct: 485 YSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANI--LFEK 542

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M  NG  PD I +N+LL     G   E    L ++MV + +  +  +   ++D +CK  +
Sbjct: 543 MEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEK 602

Query: 350 MDLAFEIMAEMPAK 363
                +++ + P +
Sbjct: 603 YKKFVDLLPKFPVQ 616


>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 154/621 (24%), Positives = 284/621 (45%), Gaps = 71/621 (11%)

Query: 73  APNPKPF-----HSL-SPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVV-- 124
            PNP P      HS  SP P S +   P F+  ++     +    + K A+  +  VV  
Sbjct: 4   TPNPSPIIFDFPHSTHSPHPKSSN---PTFTTHKTLISCKE---SKSKGALEEKKKVVFV 57

Query: 125 -AEEALHHVTAFARDDVSLGDILKKFEFKLCGADDY------TFLLRELGNRGEWSKAIQ 177
             +   H V+      +   DI K +  ++  AD +      + ++  L     W     
Sbjct: 58  DYDNGKHQVSTHV-SGLRKADIPKHYRLRV-EADRFQKDWSVSEVVERLLKLNHWDDVEG 115

Query: 178 CFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE-GYGNTVYAFSALIS 236
                V R  RKN        +I  + ++G ++ +  +F    N+  Y      ++ +I 
Sbjct: 116 LLNRWVGRFSRKN-----FPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIR 170

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQ 296
            + R     +A  +F  M+++  KP+  TYNA+I+A G+ G  ++  + I DDMLR  + 
Sbjct: 171 LHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAG-QWRWAMNIMDDMLRAAIP 229

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           P R T+N+L+  C   G W+ A N+  +M   G+  D+ T+N +L A  +G Q       
Sbjct: 230 PSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSY 289

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL--DRVSYNTVLSIY 414
              M   NI P+  T + +I    K G+   A+++F+ MK        D V++ T++ +Y
Sbjct: 290 FELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLY 349

Query: 415 AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
           +  G+ E        M + G++ + V+YNAL+G Y   G   E   +F ++K +   P++
Sbjct: 350 SVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDV 409

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           ++Y++L++ Y K G  ++AM++F   ++   K ++V Y+ALIDA    GL+  AV +L E
Sbjct: 410 VSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHE 469

Query: 535 MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEA 594
           M + G++PN+V+  +++ A GR                           C Q  K     
Sbjct: 470 MERNGVQPNIVSICTLLAACGR---------------------------CGQKVKIKSVL 502

Query: 595 GRTDNQIIKV----FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
              + + IK+    +   +      G+ +          L +++ M   K+KP+ VT++ 
Sbjct: 503 SAAELRGIKLNTTAYNSAIGSYLSVGEYDK--------ALSLYRAMRTKKVKPDPVTYNV 554

Query: 651 ILNACSRCNSFEDASMLLEEL 671
           +++ C + + + +A   L+E+
Sbjct: 555 LISGCCKMSKYGEALGFLDEM 575



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 135/536 (25%), Positives = 250/536 (46%), Gaps = 35/536 (6%)

Query: 154 CGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK 213
           C  +D   ++  L  R       +   F +++   K D  +  +A+I+  GR G+   A 
Sbjct: 159 CARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPD-AETYNALINAHGRAGQWRWAM 217

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
           NI +  L      +   ++ LI+A G SG  +EA++V   M    + P+LVT+N V+ A 
Sbjct: 218 NIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAY 277

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID-- 331
            +G   +  V+  F+ M    ++PD  T N ++    + G    A ++FN M  +  +  
Sbjct: 278 KRGN-QYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECY 336

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D+ T+ T++       Q++        M A+ + PN+V+Y+ +I  YA  G   +A ++
Sbjct: 337 PDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSV 396

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F+E+K  G   D VSY ++L+ Y K G+ E+A+ V + M  +  + + V+YNAL+  YG 
Sbjct: 397 FNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGS 456

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           +G   E   +  +M+ + V PN+++  TL+    + G   +   +    +  G+K +   
Sbjct: 457 KGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTA 516

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           Y++ I +    G  + A+SL   M  + ++P+ VTYN +I          C +      L
Sbjct: 517 YNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGC-------CKMSKYGEAL 569

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
           G   E  +L    S++                V+  ++   + QG        ++     
Sbjct: 570 GFLDEMMDLKIPLSKE----------------VYSSVICAYSKQG--------QVTEAES 605

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM 687
           +F KM  +  +P+V+T++A+++A     ++E AS L  E+   D Q   +A   LM
Sbjct: 606 MFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLM 661



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 140/573 (24%), Positives = 249/573 (43%), Gaps = 84/573 (14%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCF------AFAVKREERKNDQGKLASAMISILGRLGKV 209
           A+ Y  L+   G  G+W  A+         A    R    N        +I+  G  G  
Sbjct: 197 AETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNN--------LINACGSSGNW 248

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
             A N+ +     G G  +   + ++SAY R     + +S F  MK  N++P+  T N V
Sbjct: 249 KEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIV 308

Query: 270 I-----------------------DACGKGGVDFKHVVEI-------------FDDMLRN 293
           I                         C    V F  ++ +             F+ ML  
Sbjct: 309 IYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAE 368

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G++P+ +++N+L+   +  G+ + A ++FNE+   G   D+ +Y +LL+A  K  + + A
Sbjct: 369 GLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKA 428

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
            ++   M   +  PN+V+Y+ +ID Y   G L +A+ +  EM+  G+  + VS  T+L+ 
Sbjct: 429 MKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAA 488

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
             + G+  +   V    E  GI+ +   YN+ +G Y   G+YD+   ++  M+   V P+
Sbjct: 489 CGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPD 548

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +TY+ LI    K   Y EA+    E     +     +YS++I A  K G V  A S+  
Sbjct: 549 PVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFT 608

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
           +M   G RP+V+TY ++I A+               D+ +  E A+   +  + D DVQ 
Sbjct: 609 KMKMVGCRPDVITYTAMIHAY---------------DVAENWEKASALFLEMETD-DVQP 652

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
                + +++ F      K GQ  K          +L + + M + KI  N  +F  +++
Sbjct: 653 DSIACSSLMRAFN-----KGGQPAK----------VLVLAEFMREKKIPFNNSSFFEMVS 697

Query: 654 ACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
           ACS    + +   ++  ++L +  +  V+ GLL
Sbjct: 698 ACSLLREWRE---IIGLIKLMEPSISVVSIGLL 727



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 192/390 (49%), Gaps = 36/390 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I      G    A ++F      G+   V ++++L++AYG+SG  ++A+ VF  M+R
Sbjct: 378 NALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRR 437

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL-- 314
            + KPNLV+YNA+IDA G  G+     VEI  +M RNGVQP+ ++  +LLA C R G   
Sbjct: 438 NHCKPNLVSYNALIDAYGSKGL-LTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKV 496

Query: 315 ---------------------------------WEAARNLFNEMVHRGIDQDIFTYNTLL 341
                                            ++ A +L+  M  + +  D  TYN L+
Sbjct: 497 KIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLI 556

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
              CK ++   A   + EM    I  +   YS++I  Y+K G++ +A +MF++MK +G  
Sbjct: 557 SGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCR 616

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D ++Y  ++  Y     +E+A  +  EME+  ++ D++  ++L+  + K G+  +V  +
Sbjct: 617 PDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVL 676

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            E M+   +  N  ++  ++   S    ++E + + +  + +     + L + L+  L K
Sbjct: 677 AEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGK 736

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +G +E+ + L  ++   G   N  TY+ ++
Sbjct: 737 SGKIETMMKLFYKIVASGAEINFYTYSILL 766


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 136/482 (28%), Positives = 233/482 (48%), Gaps = 42/482 (8%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           L   L   G   +A +CF     R+ R   + +  +A++  L ++G+ DL++  F+    
Sbjct: 191 LFSALIELGMLEEASECFL--KMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGA 248

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
            G   +V+ ++ +I    + G  + A S+F  MK     P++VTYN++ID  GK G+   
Sbjct: 249 AGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGL-LD 307

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             + IF+ M      PD IT+N+L+    +      A    +EM   G+  ++ TY+T +
Sbjct: 308 ECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFI 367

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           DA CK   +  A +   +M    ++PN  TY+++ID   KAG L +AL +  E+   GI 
Sbjct: 368 DAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIK 427

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
           L+ V+Y  +L    + GR +EA  V + M ++G+  +  TY AL+ G+ K  + +  + +
Sbjct: 428 LNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDI 487

Query: 462 FEQMKADCVSPNLL-----------------------------------TYSTLIDVYSK 486
            ++MK  C+ P+LL                                    Y+TL+D Y K
Sbjct: 488 LKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFK 547

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G   EA+ +  E    GL A  V Y ALID LCK+GLV+ A+     M++ G++PNV  
Sbjct: 548 SGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAV 607

Query: 547 YNSIIDAFGRSATTECT--VDDVERDLGKQKESANLDAMCSQDDK--DVQEAGRTDNQII 602
           Y +++D   ++   E    + D   D G   +     A+   + K  ++QEA    +++I
Sbjct: 608 YTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMI 667

Query: 603 KV 604
           ++
Sbjct: 668 EI 669



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 226/451 (50%), Gaps = 42/451 (9%)

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           P    ++A+  A  + G+  +   E F  M +  V P   + N+LL   S+ G  + +R 
Sbjct: 183 PGFGVFDALFSALIELGM-LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRK 241

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
            F +M   GI + +FTYN ++D +CK   +++A  +  +M     +P++VTY+++IDG+ 
Sbjct: 242 FFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHG 301

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K G LD+ + +F +MK      D ++YN +++ + K  R  +A     EM+++G++ + V
Sbjct: 302 KLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVV 361

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY+  +  + K+G   E  + F  M+   ++PN  TY++LID   K G   EA+++  E 
Sbjct: 362 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 421

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            QAG+K +VV Y+AL+D LC+ G ++ A  +   M   G+ PN  TY +++  F ++   
Sbjct: 422 LQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEM 481

Query: 561 ECTVDDVERDLGKQKESANLD-------AMCSQDD--------KDVQEAGRTDNQIIKVF 605
           E    D+ +++ ++    +L         +C++           +++E+G   N +I   
Sbjct: 482 E-YAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTT 540

Query: 606 GQLVAEKAGQGKKENRCRQEI------------------LCILGVFQ-------KMHKLK 640
                 K+GQ  +     +E+                  LC  G+ Q       +M ++ 
Sbjct: 541 LMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIG 600

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           ++PNV  ++A+++   + N FE A  L +E+
Sbjct: 601 LQPNVAVYTALVDGLCKNNCFEVAKKLFDEM 631



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 197/389 (50%), Gaps = 3/389 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+   +  ++  A          G    V  +S  I A+ + G  QEAI  F  M+R
Sbjct: 329 NALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRR 388

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             L PN  TY ++IDA  K G +    +++ +++L+ G++ + +T+ +LL  +C  G + 
Sbjct: 389 VALTPNEFTYTSLIDANCKAG-NLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMK 447

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA   +F  M++ G+  +  TY  L+    K  +M+ A +I+ EM  K I P+++ Y T+
Sbjct: 448 EA-EEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTI 506

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G     RL++A  +  E+K  GI  + V Y T++  Y K G+  EAL + +EM   G+
Sbjct: 507 LWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGL 566

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
               VTY AL+ G  K G   E    F +M    + PN+  Y+ L+D   K   ++ A +
Sbjct: 567 IATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKK 626

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F E    G+  D + Y+ALID   K+G ++ A++L D M + G+  ++  Y ++I    
Sbjct: 627 LFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLS 686

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMC 584
            S   +   + ++  +GK      +  MC
Sbjct: 687 HSGQVQKARNLLDEMIGKGVLPDEVVYMC 715



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 160/345 (46%), Gaps = 3/345 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I    + G +  A  + E  L  G    V  ++AL+      G  +EA  VF +M  
Sbjct: 399 TSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLN 458

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             + PN  TY A++    K   + ++  +I  +M    ++PD + + ++L  +C+   L 
Sbjct: 459 AGVAPNQETYTALVHGFIKAK-EMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRL- 516

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A+ L  E+   GI+ +   Y TL+DA  K  Q   A  ++ EM    +    VTY  +
Sbjct: 517 EEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCAL 576

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K+G + +A++ F  M  +G+  +   Y  ++    K   FE A  +  EM   G+
Sbjct: 577 IDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGM 636

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D + Y AL+ G  K G   E   + ++M    +  +L  Y+ LI   S  G  ++A  
Sbjct: 637 MPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARN 696

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           +  E    G+  D V+Y  LI      G V+ A+ L +EM K G+
Sbjct: 697 LLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 741


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 193/348 (55%), Gaps = 7/348 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A ++F+  ++EG+   V  +  LI+   + G    AI +  SM++ N +P++V Y
Sbjct: 140 GKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIY 199

Query: 267 NAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            ++ID+  K     + V E   +F  M+  G+ PD  T+ SL+        W+    L N
Sbjct: 200 TSIIDSLCKD----RQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLN 255

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           +MV+  I  D+  ++T++DA+CK  ++  A EI+  M  + + P+VVTY+T++DG+    
Sbjct: 256 QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQS 315

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            +D+A+ +F  M   G   D +SY T+++ Y K+ + ++A+ + +EM       D  TYN
Sbjct: 316 EMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYN 375

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+ G    G+  +   +F +M A    P+L+TYS L+D   K    +EAM + +  + +
Sbjct: 376 TLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEAS 435

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            L  D+ +Y+ +ID +C+ G +E+A  L   ++ +G+ P+V TYN +I
Sbjct: 436 NLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 483



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 181/367 (49%), Gaps = 1/367 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+    L +V  A ++    L  G+      F+ LI      G   EA+ +F+ M    
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +PN+VTY  +I+   K G +    + +   M +   QPD + + S++    +      A
Sbjct: 157 FQPNVVTYGTLINGLCKVG-NTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 215

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            NLF++MV +GI  DIFTY +L+ A+C   +      ++ +M    I P+VV +ST++D 
Sbjct: 216 FNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 275

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K G++ +A  +   M   G+  D V+Y T++  +      +EA+ V   M   G   D
Sbjct: 276 LCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPD 335

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            ++Y  L+ GY K  K D+   +FE+M      P+  TY+TL+      G  ++A+ +F 
Sbjct: 336 VISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFH 395

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E    G   D+V YS L+D+LCKN  +E A++LL  +    + P++  YN IID   R+ 
Sbjct: 396 EMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAG 455

Query: 559 TTECTVD 565
             E   D
Sbjct: 456 ELEAARD 462



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 200/398 (50%), Gaps = 11/398 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKVDLAKNIF 216
           Y  L+  L   G  S AI+     ++  E+ N Q  +   +++I  L +  +V  A N+F
Sbjct: 164 YGTLINGLCKVGNTSAAIR----LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF 219

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
              + +G    ++ +++L+ A       +   ++ N M    + P++V ++ V+DA C +
Sbjct: 220 SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKE 279

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           G V   H  EI D M++ GV+PD +T+ +L+   C +  + EA + +F+ MV +G   D+
Sbjct: 280 GKVTEAH--EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK-VFDMMVRKGFAPDV 336

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            +Y TL++  CK  ++D A  +  EM  K   P+  TY+T++ G    GRL DA+ +F E
Sbjct: 337 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE 396

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G   D V+Y+ +L    K    EEA+ + K +E+S +  D   YN ++ G  + G+
Sbjct: 397 MVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 456

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            +  R +F  + +  + P++ TY+ +I    K GL  EA ++F E        D   Y+ 
Sbjct: 457 LEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNT 516

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           +     +N     A+ LL+EM   G   +V T   +++
Sbjct: 517 IARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVE 554



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 180/399 (45%), Gaps = 42/399 (10%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L N  EW          V  +   +    + S ++  L + GKV  A  I + 
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPD--VVIFSTVVDALCKEGKVTEAHEIVDM 291

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +  G    V  ++ L+  +       EA+ VF+ M R    P++++Y  +I+  C    
Sbjct: 292 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 351

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           +D    + +F++M R    PD  T+N+L+  +C  G L +A   LF+EMV RG   D+ T
Sbjct: 352 ID--KAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA-LFHEMVARGQMPDLVT 408

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y+ LLD++CK   ++ A  ++  + A N++P++  Y+ +IDG  +AG L+ A ++FS + 
Sbjct: 409 YSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLS 468

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
                                              S G+     TYN ++ G  K+G  +
Sbjct: 469 -----------------------------------SKGLHPSVWTYNIMIHGLCKRGLLN 493

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E  ++F +M  +  SP+  TY+T+   + +      A+Q+  E    G  ADV   + L+
Sbjct: 494 EANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLV 553

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           + L  +GL +S+  L+  +  E  R   +      D  G
Sbjct: 554 EMLSDDGLDQSSCFLMLSVLSEDDRRYFIFIPEGFDLLG 592



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 139/267 (52%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F+ +L     P  + F  LL   ++   +    +L  +M   G+  +++T N L+++ C 
Sbjct: 44  FNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCH 103

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  AF ++A++      P+  T++T+I G    G++ +AL++F +M   G   + V+
Sbjct: 104 LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 163

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T+++   K+G    A+ + + ME    + D V Y +++    K  +  E   +F QM 
Sbjct: 164 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 223

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              +SP++ TY++L+        +K    +  +   + +  DVV++S ++DALCK G V 
Sbjct: 224 GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVT 283

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            A  ++D M + G+ P+VVTY +++D 
Sbjct: 284 EAHEIVDMMIQRGVEPDVVTYTTLMDG 310



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/444 (20%), Positives = 192/444 (43%), Gaps = 24/444 (5%)

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           FN ++H      I  +  LL +I K         +  +M +  + PNV T + +I+ +  
Sbjct: 44  FNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCH 103

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
             R+  A ++ +++  LG   D  ++ T++      G+  EAL +  +M   G + + VT
Sbjct: 104 LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 163

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  L+ G  K G      R+   M+     P+++ Y+++ID   K     EA  +F +  
Sbjct: 164 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 223

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G+  D+  Y++L+ ALC     +   +LL++M    I P+VV +++++DA  +     
Sbjct: 224 GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVT 283

Query: 562 CTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG- 614
              + V+  + +  E      +  +D  C Q + D         + +KVF  +V +    
Sbjct: 284 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMD---------EAVKVFDMMVRKGFAP 334

Query: 615 -----QGKKENRCR-QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
                       C+  +I   + +F++M + +  P+  T++ +++        +DA  L 
Sbjct: 335 DVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALF 394

Query: 669 EELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHF 726
            E+         V + +L+    ++    +A++L   ++  + +     YN + D +   
Sbjct: 395 HEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRA 454

Query: 727 GQKRGAQLVVLEGKRRQVWENVWS 750
           G+   A+ +      + +  +VW+
Sbjct: 455 GELEAARDLFSNLSSKGLHPSVWT 478



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 167/393 (42%), Gaps = 67/393 (17%)

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI--------- 435
           LDDAL+ F+ +  +      V +  +L+  AK+  +   L +  +M+S G+         
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 436 --------------------------RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
                                     + D  T+  L+ G   +GK  E   +F++M  + 
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             PN++TY TLI+   K G    A+++ R  +Q   + DVV+Y+++ID+LCK+  V  A 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL--------- 580
           +L  +M  +GI P++ TY S++ A        C    V   L +   S  L         
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHAL----CNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 272

Query: 581 -DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK---AGQGKKENRCRQ-EILCILGVFQK 635
            DA+C +    V EA    ++I+ +  Q   E          +  C Q E+   + VF  
Sbjct: 273 VDALCKE--GKVTEA----HEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDM 326

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVYG-VAHGLLMGYR 690
           M +    P+V++++ ++N   + +  + A  L EE+     + D + Y  + HGL    R
Sbjct: 327 MVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGR 386

Query: 691 DNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
                 A++LF E+           Y+ L D L
Sbjct: 387 LQ---DAIALFHEMVARGQMPDLVTYSILLDSL 416


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 212/399 (53%), Gaps = 9/399 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +T L+  LG  G++++A++ F   V R  + +D     + +I+ L ++G+  LA  +F+ 
Sbjct: 48  FTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYT--YTTIINGLCKIGETALAAGLFKK 105

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G    V  +S LI +  +     EA+ +F+ MK  ++ P + TY ++I    +G  
Sbjct: 106 MEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLI----QGLC 161

Query: 279 DF---KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           +F   K    + ++M    + P+ +TFN L+    + G   AA  +   M   G++ D+ 
Sbjct: 162 NFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVV 221

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYN+L+       ++  A ++   M  K   P+V +YS +I+GY KA R+D+A  +F+EM
Sbjct: 222 TYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEM 281

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G   + VSYNT++    +LGR  EA  + K M ++G   +  TY  LL G+ KQG  
Sbjct: 282 IHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYL 341

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            +  R+F  M++  + PNL+ Y+ L++   K G  K+A ++F E    GL+ +V +Y+ +
Sbjct: 342 GKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTI 401

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           I+ LCK GL++ A+     M  +G  P+  +YN II  F
Sbjct: 402 INGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGF 440



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 169/329 (51%), Gaps = 1/329 (0%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
             + LI+ + +        SV     +  L+P +VT+  +I+  GK G  F   VE+FDD
Sbjct: 12  TLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVG-KFAQAVELFDD 70

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M+  G QPD  T+ +++    + G    A  LF +M   G   ++ TY+TL+ ++CK  +
Sbjct: 71  MVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRR 130

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++ A +I + M AK+ISP + TY+++I G     R  +A  + +EM  L I  + V++N 
Sbjct: 131 VNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNV 190

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++  + K G+   A  V K M   G+  D VTYN+L+ GY    +  E R++F+ M    
Sbjct: 191 LVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKG 250

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P++ +YS LI+ Y K     EA Q+F E    G   + V Y+ LI  LC+ G +  A 
Sbjct: 251 CKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQ 310

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            L   M   G  PN+ TY  ++D F +  
Sbjct: 311 DLFKNMHTNGNLPNLYTYAILLDGFCKQG 339



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 185/360 (51%), Gaps = 1/360 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+   +L +VDL  ++    +  G   T+  F+ LI+  G+ G   +A+ +F+ M    
Sbjct: 16  LINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARG 75

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +P+  TY  +I+   K G +      +F  M   G Q + +T+++L+    +      A
Sbjct: 76  CQPDDYTYTTIINGLCKIG-ETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEA 134

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            ++F+ M  + I   IFTY +L+  +C  ++   A  ++ EM + NI PNVVT++ ++D 
Sbjct: 135 LDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDT 194

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           + K G++  A  +   M  +G+  D V+YN+++  Y+      EA  +   M + G + D
Sbjct: 195 FCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPD 254

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
             +Y+ L+ GY K  + DE +++F +M     +PN ++Y+TLI    + G  +EA  +F+
Sbjct: 255 VFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFK 314

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
                G   ++  Y+ L+D  CK G +  A  L   M    ++PN+V YN +++A  +S 
Sbjct: 315 NMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSG 374



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 180/393 (45%), Gaps = 42/393 (10%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKV 209
           C  DDYT+  ++  L   GE + A   F    K+ E    Q  +   S +I  L +  +V
Sbjct: 76  CQPDDYTYTTIINGLCKIGETALAAGLF----KKMEEAGCQLNVVTYSTLIHSLCKYRRV 131

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
           + A +IF     +    T++ +++LI         +EA ++ N M   N+ PN+VT+N +
Sbjct: 132 NEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVL 191

Query: 270 IDA-CGKG---------------GVD---------------FKHVVE---IFDDMLRNGV 295
           +D  C +G               GV+               +  VVE   +FD M+  G 
Sbjct: 192 VDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGC 251

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +PD  +++ L+    +    + A+ LFNEM+H+G   +  +YNTL+  +C+  ++  A +
Sbjct: 252 KPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQD 311

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           +   M      PN+ TY+ ++DG+ K G L  A  +F  M+   +  + V YN +++   
Sbjct: 312 LFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMC 371

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K G  ++A  +  E+   G++ +   Y  ++ G  K+G  DE    F  M+ D   P+  
Sbjct: 372 KSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEF 431

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           +Y+ +I  + +      A+ +  E +  G   D
Sbjct: 432 SYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 3/231 (1%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ +F+  + +G    V+++S LI+ Y ++    EA  +FN M      PN V+YN +I 
Sbjct: 239 ARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIH 298

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGI 330
              + G   +   ++F +M  NG  P+  T+  LL   C +G L +A R LF  M    +
Sbjct: 299 GLCQLG-RLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFR-LFRAMQSTYL 356

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             ++  YN L++A+CK   +  A E+ +E+    + PNV  Y+T+I+G  K G LD+AL 
Sbjct: 357 KPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALE 416

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            F  M+  G   D  SYN ++  + +      A+ +  EM   G   DA T
Sbjct: 417 AFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 105/199 (52%)

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M    +SPN  T + +I+ + +  R+D   ++ ++   LG+    V++ T+++   K+G+
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
           F +A+ +  +M + G + D  TY  ++ G  K G+      +F++M+      N++TYST
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LI    K     EA+ IF   K   +   +  Y++LI  LC     + A +LL+EMT   
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 540 IRPNVVTYNSIIDAFGRSA 558
           I PNVVT+N ++D F +  
Sbjct: 181 IMPNVVTFNVLVDTFCKEG 199



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 85/202 (42%), Gaps = 31/202 (15%)

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           +SPN  T + LI+ + +         +  +  + GL+  +V ++ LI+ L K G    AV
Sbjct: 6   LSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAV 65

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            L D+M   G +P+  TY +II+   +   T                     A+ +   K
Sbjct: 66  ELFDDMVARGCQPDDYTYTTIINGLCKIGET---------------------ALAAGLFK 104

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
            ++EAG   N +   +  L+        K  R  +     L +F  M    I P + T++
Sbjct: 105 KMEEAGCQLNVV--TYSTLIHSLC----KYRRVNEA----LDIFSYMKAKDISPTIFTYT 154

Query: 650 AILNACSRCNSFEDASMLLEEL 671
           +++      + +++AS LL E+
Sbjct: 155 SLIQGLCNFSRWKEASALLNEM 176


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 156/573 (27%), Positives = 268/573 (46%), Gaps = 24/573 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI +L +  ++D A  +FE           YA++ +I  YG +G   EA  +    K 
Sbjct: 304 TSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKA 363

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+++ YN ++   GK     +  + IF++M R+ V P+  T+N L+ +  R G   
Sbjct: 364 KGSIPSVIAYNCILTCLGKKR-RVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLN 421

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AA  + ++M   G+  ++ T N ++D +CK  +++ A  I   M  K  +PN VT+S++I
Sbjct: 422 AALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLI 481

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  K GR+DDA +++ +M   G     + Y +++  + K GR E+   + KEM  +G  
Sbjct: 482 DGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCS 541

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D    N  +    K G+ ++ R +F ++ A    P+  +YS LI    K GL  E  ++
Sbjct: 542 PDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYEL 601

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F   K+ G   D   Y+A+ID  CK+G V  A  LL+EM  +G  P VVTY S+ID   +
Sbjct: 602 FYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAK 661

Query: 557 SATTECTVDDVERDLGKQKESA---NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
                  +D+      + K +    N+    S  D    + GR D   + +  +L+ +  
Sbjct: 662 ID----RLDEAYMLFEEAKSNGIKLNVVVYSSLID-GFGKVGRIDEAYL-IMEELMQKGL 715

Query: 614 GQGKKENRC-------RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
                   C        +EI   L  FQ M  LK  PN +T+S ++N   R   F  A +
Sbjct: 716 TPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFV 775

Query: 667 LLEELRLFDNQVYGVAHGLL---MGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
             +E++    +   + +  +   +    NI ++A  LF   K       SA YNA+ + L
Sbjct: 776 FWQEMQKLGLKPNTITYTTMISGLAKAGNI-LEASGLFSRFKANGGIPDSASYNAMIEGL 834

Query: 724 WHFGQKRGAQLVVLEGKRRQVWENVWSESCLDL 756
               +   A  +  E + +    N+ +++C+ L
Sbjct: 835 SSANKAMDAYALFEETRLKGC--NIHTKTCVVL 865



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 153/606 (25%), Positives = 273/606 (45%), Gaps = 80/606 (13%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT ++  L       +A++   F    + RK       + MI   G  GK D A  + E 
Sbjct: 303 YTSMIGVLCKANRLDEAVE--LFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLER 360

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G   +V A++ +++  G+    +EA+ +F  MKR +  PN+ TYN +ID   + G 
Sbjct: 361 QKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR-DAVPNVPTYNILIDMLCREG- 418

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                +EI DDM R G+ P+ +T N ++    +    E A ++F  M  +    +  T++
Sbjct: 419 KLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFS 478

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L+D + K  ++D A+ +  +M      P  + Y+++I  + K GR +D   ++ EM   
Sbjct: 479 SLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHT 538

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY---------------- 442
           G   D    NT +    K G  E+   + +E+ + G   DA +Y                
Sbjct: 539 GCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANET 598

Query: 443 -------------------NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
                              NA++ G+ K GK ++  ++ E+MK     P ++TY ++ID 
Sbjct: 599 YELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDG 658

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            +K     EA  +F E K  G+K +VV+YS+LID   K G ++ A  +++E+ ++G+ PN
Sbjct: 659 LAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 718

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           V T+N ++DA  ++                  E  N   +C Q  KD++      NQI  
Sbjct: 719 VYTWNCLLDALVKA------------------EEINEALICFQSMKDLK---CPPNQI-- 755

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVF-QKMHKLKIKPNVVTFSAILNACSRCNSFE 662
            +  L+            CR        VF Q+M KL +KPN +T++ +++  ++  +  
Sbjct: 756 TYSILI---------NGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNIL 806

Query: 663 DASMLLEELR----LFDNQVYGVAHGLLMGYRD-NIWVQALSLFDEVKLMDSSTASAFYN 717
           +AS L    +    + D+  Y   + ++ G    N  + A +LF+E +L   +  +    
Sbjct: 807 EASGLFSRFKANGGIPDSASY---NAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCV 863

Query: 718 ALTDML 723
            L D L
Sbjct: 864 VLLDAL 869



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 139/581 (23%), Positives = 258/581 (44%), Gaps = 40/581 (6%)

Query: 180 AFAVKREERKNDQGKLASAMISILGRLGKV---DLAKNIFETALNEGYGNTVYAFSALIS 236
           AF + +  RK       SA   ++G L +V   D    +F      GY   V+ F+ LI 
Sbjct: 179 AFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIR 238

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGV 295
            + R G    A+S+ + MK  +L  ++V YN  ID  GK G VD     + F +M  +G+
Sbjct: 239 VFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSW--KFFHEMKSHGL 296

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
            PD +T+ S++ V  +    + A  LF ++         + YNT++       + D A+ 
Sbjct: 297 MPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYG 356

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++    AK   P+V+ Y+ ++    K  R+++AL +F EMK   +  +  +YN ++ +  
Sbjct: 357 LLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP-NVPTYNILIDMLC 415

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           + G+   AL +  +ME +G+  + +T N ++    K  K +E   +FE M     +PN +
Sbjct: 416 REGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAV 475

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           T+S+LID   K G   +A  ++ +    G     ++Y++LI +  K G  E    +  EM
Sbjct: 476 TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 535

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
              G  P++   N+ +D   ++  TE       R L ++  +             + +A 
Sbjct: 536 VHTGCSPDLTLINTYMDCVFKAGETE-----KGRALFREINAHGF----------IPDAR 580

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
                 I + G + A  A +  +     +E  C+L             +   ++A+++  
Sbjct: 581 SYS---ILIHGLVKAGLANETYELFYAMKEQGCVL-------------DTHAYNAVIDGF 624

Query: 656 SRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNI--WVQALSLFDEVKLMDSSTAS 713
            +      A  LLEE+++  +    V +G ++     I    +A  LF+E K        
Sbjct: 625 CKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNV 684

Query: 714 AFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
             Y++L D     G+   A L++ E  ++ +  NV++ +CL
Sbjct: 685 VVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 725



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 183/400 (45%), Gaps = 36/400 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++I  LG+ G+VD A +++E  L+ G+      +++LI ++ + G  ++   ++  M  
Sbjct: 478 SSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVH 537

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+L   N  +D   K G   K    +F ++  +G  PD  +++ L+    + GL  
Sbjct: 538 TGCSPDLTLINTYMDCVFKAGETEKGRA-LFREINAHGFIPDARSYSILIHGLVKAGLAN 596

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP--------- 367
               LF  M  +G   D   YN ++D  CK  +++ A++++ EM  K   P         
Sbjct: 597 ETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVI 656

Query: 368 --------------------------NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
                                     NVV YS++IDG+ K GR+D+A  +  E+   G+ 
Sbjct: 657 DGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 716

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            +  ++N +L    K     EAL+  + M+      + +TY+ L+ G  +  K+++    
Sbjct: 717 PNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVF 776

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           +++M+   + PN +TY+T+I   +K G   EA  +F  FK  G   D   Y+A+I+ L  
Sbjct: 777 WQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSS 836

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
                 A +L +E   +G   +  T   ++DA  ++   E
Sbjct: 837 ANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLE 876



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 165/335 (49%), Gaps = 3/335 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L +  +  + + G+ +  + +F      G+     ++S LI    ++G   E   +F +M
Sbjct: 546 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM 605

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           K      +   YNAVID  C  G V+     ++ ++M   G  P  +T+ S++   ++  
Sbjct: 606 KEQGCVLDTHAYNAVIDGFCKSGKVN--KAYQLLEEMKVKGHPPTVVTYGSVIDGLAKID 663

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             + A  LF E    GI  ++  Y++L+D   K  ++D A+ IM E+  K ++PNV T++
Sbjct: 664 RLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 723

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            ++D   KA  +++AL  F  MK L    ++++Y+ +++   ++ +F +A +  +EM+  
Sbjct: 724 CLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKL 783

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G++ + +TY  ++ G  K G   E   +F + KA+   P+  +Y+ +I+  S      +A
Sbjct: 784 GLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDA 843

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
             +F E +  G          L+DAL K   +E A
Sbjct: 844 YALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 173/375 (46%), Gaps = 7/375 (1%)

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           +NSLL V +R   ++    +  EM   G          L+    K  ++  AF+I+  M 
Sbjct: 128 YNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMR 187

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
                P    Y+ +I   ++    D  L +F +M+ LG  ++   + T++ ++A+ GR +
Sbjct: 188 KFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVD 247

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
            AL +  EM+S+ +  D V YN  +  +GK GK D   + F +MK+  + P+ +TY+++I
Sbjct: 248 AALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMI 307

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
            V  K     EA+++F + +Q         Y+ +I      G  + A  LL+    +G  
Sbjct: 308 GVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSI 367

Query: 542 PNVVTYNSIIDAFGRSATTECTV---DDVERDLGKQKESAN--LDAMCSQDDKDVQEAGR 596
           P+V+ YN I+   G+    E  +   ++++RD      + N  +D +C +   +     R
Sbjct: 368 PSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIR 427

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
            D +   +F  ++       +     + E  C   +F+ M      PN VTFS++++   
Sbjct: 428 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEAC--SIFEGMDDKVCTPNAVTFSSLIDGLG 485

Query: 657 RCNSFEDASMLLEEL 671
           +C   +DA  L E++
Sbjct: 486 KCGRVDDAYSLYEKM 500



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 1/229 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++I  L ++ ++D A  +FE A + G    V  +S+LI  +G+ G   EA  +   + + 
Sbjct: 654 SVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQK 713

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            L PN+ T+N ++DA  K   +    +  F  M      P++IT++ L+    R   +  
Sbjct: 714 GLTPNVYTWNCLLDALVKAE-EINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNK 772

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A   + EM   G+  +  TY T++  + K   +  A  + +   A    P+  +Y+ MI+
Sbjct: 773 AFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIE 832

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           G + A +  DA  +F E +  G  +   +   +L    K    E+A +V
Sbjct: 833 GLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIV 881



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 149/348 (42%), Gaps = 36/348 (10%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +YN++L + A+   F+    + +EM  SG    +     L+    K  K  E   + + M
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           +     P    Y+ LI   S+       + +F + ++ G + +V L++ LI    + G V
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           ++A+SLLDEM    +  ++V YN  ID FG++        D+      + +S  L     
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKV-----DMSWKFFHEMKSHGL----M 297

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
            DD        T   +I V             K NR  + +     +F+++ + +  P  
Sbjct: 298 PDD-------VTYTSMIGVLC-----------KANRLDEAV----ELFEQLEQNRKVPCA 335

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL---MGYRDNIWVQALSLFD 702
             ++ ++        F++A  LLE  +   +    +A+  +   +G +  +  +AL +F+
Sbjct: 336 YAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVE-EALRIFE 394

Query: 703 EVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
           E+K  D+      YN L DML   G+   A  +  + +R  ++ NV +
Sbjct: 395 EMK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLT 441


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 249/516 (48%), Gaps = 39/516 (7%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G    V  ++ +I    R G   +A ++F+ M +  + P++VTY ++IDA C    +D  
Sbjct: 222 GCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKA 281

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            +V     M+ NG QP+++T+N ++   S  G W+    +F EM  +G+  +I T N+ +
Sbjct: 282 ELV--LRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYM 339

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
            ++CK  +   A E    M AK   PN+VTYS ++ GYA  G   D LN+F+ M+  GI 
Sbjct: 340 SSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIV 399

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D+  +N V+  Y K G  +E +L+  +M+  G+  DA TY  ++  + + G+  +    
Sbjct: 400 ADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDK 459

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL-KADVVLYSALIDALC 520
           F QM A  + P  + Y +LI  +   G   +A ++  E    G+ + ++V ++++I++LC
Sbjct: 460 FNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLC 519

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           K G V  A  + D +   G RP+V+T+NS+ID +G        V  +E+  G       L
Sbjct: 520 KEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYG-------LVGKIEKAFGV------L 566

Query: 581 DAMCSQD-DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
           DAM S   + DV             +  L+      G+ ++         L +F +M   
Sbjct: 567 DAMISAGIEPDVVS-----------YNTLIDGYCRNGRIDDG--------LILFGEMLSK 607

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQA 697
            +KP  +T+  IL+          A  +  E+      +     G+++G   R+N   +A
Sbjct: 608 GVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEA 667

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           +++F ++  M+     A  N + D ++   ++  A+
Sbjct: 668 IAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAK 703



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 150/590 (25%), Positives = 276/590 (46%), Gaps = 43/590 (7%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  ++  L   GE SKA  C  F    ++         +++I  L +   +D A+ +   
Sbjct: 230 YNTVIHGLFREGEVSKA--CNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQ 287

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            ++ G+      ++ +I  Y  SG  +E   +F  M    L PN+VT N+ + +  K G 
Sbjct: 288 MISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGK 347

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K   E FD M   G +P+ +T++ LL   +  G +    NLFN M   GI  D   +N
Sbjct: 348 S-KEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFN 406

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            ++DA  K   MD    I  +M  + + P+  TY  +I  +++ GRL DA++ F++M  +
Sbjct: 407 IVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAM 466

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI-RKDAVTYNALLGGYGKQGKYDE 457
           G+  + + Y++++  +   G   +A  +  EM S GI R + V +N+++    K+G+  E
Sbjct: 467 GLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVE 526

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +F+ +      P+++T+++LID Y   G  ++A  +      AG++ DVV Y+ LID
Sbjct: 527 AHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLID 586

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
             C+NG ++  + L  EM  +G++P  +TY  I+                 R +G +K  
Sbjct: 587 GYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDG----------RTVGAKK-- 634

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
                MC +    + E+G T +  I   G ++      G   N C  E    + +F+K+ 
Sbjct: 635 -----MCHE----MIESGTTMD--ISTCGIILG-----GLCRNNCDDE---AIAMFKKLG 675

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDN-QVYGVAHGLLMGYRDNI 693
            + +K N+   + +++A  +    E+A  L + +    L  N   YGV    L+  ++  
Sbjct: 676 AMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLL--KEGS 733

Query: 694 WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ--KRGAQLVVLEGKR 741
             +A ++F  ++    + +S   N +  +L   G+  K G  +  ++GKR
Sbjct: 734 VEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKR 783



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 210/460 (45%), Gaps = 70/460 (15%)

Query: 250 VFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN--GVQPDRITFNSLLA 307
           + + M    ++P+ ++YN V+    +     +  +++   M++   G  P+ +T+N+++ 
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRS-QRALDLLHTMVKKSGGCSPNVVTYNTVIH 235

Query: 308 VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
              R G    A NLF+EM+ +G+  D+ TY +++DA+CK   MD A  ++ +M +    P
Sbjct: 236 GLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQP 295

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI--------------------------- 400
           N VTY+ MI GY+ +G+  +   MF EM   G+                           
Sbjct: 296 NKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFF 355

Query: 401 --------GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
                     + V+Y+ +L  YA  G F + L +   ME +GI  D   +N ++  YGK+
Sbjct: 356 DSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKR 415

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G  DE   +F QM+   V P+  TY  +I  +S+ G   +AM  F +    GLK + ++Y
Sbjct: 416 GMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVY 475

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGI-RPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
            +LI   C +G +  A  L+ EM   GI RPN+V +NSII++  +               
Sbjct: 476 HSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKE-------------- 521

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
           G+  E+ ++       D  +    R D   +  F  L+      GK E           G
Sbjct: 522 GRVVEAHDI------FDFVIHIGERPD---VITFNSLIDGYGLVGKIEKA--------FG 564

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           V   M    I+P+VV+++ +++   R    +D  +L  E+
Sbjct: 565 VLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEM 604



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 222/460 (48%), Gaps = 51/460 (11%)

Query: 231 FSALISAYGRSGYCQE----AISVFNSMKRYNLKP-----NLVTYNAVIDACGKG---GV 278
           F+AL  A   S  C++    A+++FN + R   +P      + TYN ++D C +     V
Sbjct: 79  FTALARA-PSSAACRDGPSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRTRRPTV 137

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR--NLFNEMVHR----GIDQ 332
            F     +F   L+ G++ D I  + LL       L+ A R  ++ N ++HR    G++ 
Sbjct: 138 GFA----LFGRFLKTGLKMDVIVASILLKC-----LYHAKRSDDVVNLLLHRMPELGVEP 188

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN--ISPNVVTYSTMIDGYAKAGRLDDALN 390
           D  +YNT++  +C+ ++   A +++  M  K+   SPNVVTY+T+I G  + G +  A N
Sbjct: 189 DTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACN 248

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +F EM   G+  D V+Y +++    K    ++A LV ++M S+G + + VTYN ++ GY 
Sbjct: 249 LFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYS 308

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
             G++ E   MF +M +  + PN++T ++ +    K G  KEA + F      G K ++V
Sbjct: 309 ISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLV 368

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            YS L+      G     ++L + M   GI  +   +N +IDA+G+       +D+    
Sbjct: 369 TYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG----MMDETMLI 424

Query: 571 LGKQKESANLDAMCSQD--DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL- 627
             + +E   +   C+           GR  + + K F Q++A      K E      ++ 
Sbjct: 425 FTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDK-FNQMIAMGL---KPEGIVYHSLIQ 480

Query: 628 --CILG--------VFQKMHKLKIKPNVVTFSAILNACSR 657
             C+ G        V + M +   +PN+V F++I+N+  +
Sbjct: 481 GFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCK 520



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 149/302 (49%), Gaps = 3/302 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I+ L + G+V  A +IF+  ++ G    V  F++LI  YG  G  ++A  V ++M  
Sbjct: 512 NSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMIS 571

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             ++P++V+YN +ID  C  G +D   +  +F +ML  GV+P  IT+  +L      G  
Sbjct: 572 AGIEPDVVSYNTLIDGYCRNGRIDDGLI--LFGEMLSKGVKPTTITYGIILHGLFNDGRT 629

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A+ + +EM+  G   DI T   +L  +C+    D A  +  ++ A N+  N+   +TM
Sbjct: 630 VGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTM 689

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID   K  + ++A  +F  +   G+  +  +Y  ++    K G  EEA  +   ME SG 
Sbjct: 690 IDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGC 749

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
              +   N ++    ++G+  +      ++    +S    T S L+ ++S+ G Y E ++
Sbjct: 750 APSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVK 809

Query: 496 IF 497
           + 
Sbjct: 810 LL 811



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 172/437 (39%), Gaps = 81/437 (18%)

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN-- 320
           +  + A  +    G +  +    +FD++LR  +     + N      +R     A R+  
Sbjct: 36  IAAFGAATERARAGTLSTEDAHHLFDELLRQTIPVPERSLNGFFTALARAPSSAACRDGP 95

Query: 321 -----LFNEMVH-----RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
                LFN +       R     + TYN L+D  C+  +  + F +        +  +V+
Sbjct: 96  SLAVALFNRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVI 155

Query: 371 TYSTMIDGYAKAGRLDDALNMF-SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
             S ++     A R DD +N+    M  LG+  D +SYNTV+    +  R + AL     
Sbjct: 156 VASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRAL----- 210

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
                                     D +  M +  K+   SPN++TY+T+I    + G 
Sbjct: 211 --------------------------DLLHTMVK--KSGGCSPNVVTYNTVIHGLFREGE 242

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
             +A  +F E  Q G+  DVV Y+++IDALCK   ++ A  +L +M   G +PN VTYN 
Sbjct: 243 VSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNC 302

Query: 550 IIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
           +I  +  S              G+ KE+A +        +++   G   N  I      +
Sbjct: 303 MIHGYSIS--------------GQWKETAGM-------FREMTSQGLMPN--IVTCNSYM 339

Query: 610 AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
           +     GK +             F  M     KPN+VT+S +L+  +    F D   L  
Sbjct: 340 SSLCKHGKSKEAAE--------FFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFN 391

Query: 670 ELR----LFDNQVYGVA 682
            +     + D +V+ + 
Sbjct: 392 SMEGNGIVADQRVFNIV 408



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 143/288 (49%), Gaps = 6/288 (2%)

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
           N V+ F+++I++  + G   EA  +F+ +     +P+++T+N++ID  G  G   +    
Sbjct: 507 NIVF-FNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVG-KIEKAFG 564

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           + D M+  G++PD +++N+L+    R G  +    LF EM+ +G+     TY  +L  + 
Sbjct: 565 VLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLF 624

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
              +   A ++  EM     + ++ T   ++ G  +    D+A+ MF ++  + +  +  
Sbjct: 625 NDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIA 684

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
             NT++    K+ + EEA  +   + ++G+  +A TY  ++    K+G  +E   MF  M
Sbjct: 685 IINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLM 744

Query: 466 KADCVSPN--LLTYSTLIDVYSKGGLYKEAMQIFR-EFKQAGLKADVV 510
           +    +P+  LL Y   + +  KG + K    +F+ + K+  L+A  V
Sbjct: 745 EKSGCAPSSRLLNYIIRV-LLEKGEIVKAGNYMFKVDGKRISLEASTV 791


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 191/357 (53%), Gaps = 1/357 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L RL  VD A +I       G   T   F+ALI+     G  +EA+ +FN M R
Sbjct: 127 NVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVR 186

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +PN+++YN +I+   K G +    V++F  M +NG +PD +T+N+++    +  L  
Sbjct: 187 RGHEPNVISYNTIINGLCKTG-NTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVN 245

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A    +EM+ RGI  ++FTYN ++   C   Q++ A  +  EM  +++ P+ VT + ++
Sbjct: 246 DAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILV 305

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  K G + +A  +F  M   G+  +  +YN ++  Y       EA  V + M   G  
Sbjct: 306 DGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCA 365

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
               +YN L+ G+ K  + DE + +  +M    ++P+ +TYSTL+    + G  KEA+ I
Sbjct: 366 PGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNI 425

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           F+E    GL  ++V YS L+D  CK+G ++ A+ LL  M ++ + PN+V +  +I+ 
Sbjct: 426 FKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEG 482



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 184/335 (54%), Gaps = 3/335 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G  + VY+ + LI+   R  +   A+S+   M +  + P   T+NA+I+  C +G +  K
Sbjct: 118 GVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKI--K 175

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             VE+F++M+R G +P+ I++N+++    + G    A ++F +M   G   D+ TYNT++
Sbjct: 176 EAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTII 235

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           D++CK   ++ A E ++EM  + I PNV TY+ M+ G+   G+L++A  +F EM    + 
Sbjct: 236 DSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVM 295

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D V+   ++    K G   EA LV + M   G+  +  TYNAL+ GY  Q   +E +++
Sbjct: 296 PDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKV 355

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           FE M     +P + +Y+ LI+ + K     EA  +  E     L  D V YS L+  LC+
Sbjct: 356 FEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 415

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            G  + A+++  EM   G+ PN+VTY+ ++D F +
Sbjct: 416 FGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCK 450



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 218/426 (51%), Gaps = 6/426 (1%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
           A  +  L+  L N G+  +A++ F   V+R    N      + +I+ L + G   +A ++
Sbjct: 158 ASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVIS--YNTIINGLCKTGNTSMAVDV 215

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CG 274
           F+     G    V  ++ +I +  +     +A+   + M    + PN+ TYN ++   C 
Sbjct: 216 FKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCI 275

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
            G ++      +F +M+   V PD +T   L+    + G+   AR +F  M  +G++ +I
Sbjct: 276 LGQLN--EATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNI 333

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TYN L+D  C    M+ A ++   M  +  +P V +Y+ +I+G+ K+ R+D+A ++ +E
Sbjct: 334 STYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAE 393

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M    +  D V+Y+T++    + GR +EAL + KEM S G+  + VTY+ LL G+ K G 
Sbjct: 394 MYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGH 453

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            DE  ++ + M+   + PN++ ++ LI+     G  + A ++F +    G++  +  Y+ 
Sbjct: 454 LDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTV 513

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           +I  L K GL + A  L  +M  +G  PN  +YN +I  F ++  +   +  ++  +GK 
Sbjct: 514 MIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGK- 572

Query: 575 KESANL 580
           + SANL
Sbjct: 573 RFSANL 578



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 206/428 (48%), Gaps = 34/428 (7%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +A++ F  M R N +P++  +   + +  K    +  VV + + M   GV  +  + N L
Sbjct: 71  DALASFYRMVRMNPRPSVAEFGKFLGSFAKKK-QYSTVVSLCNQMDLFGVTHNVYSLNVL 129

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    R    + A ++  +M   GI     T+N L++ +C   ++  A E+  EM  +  
Sbjct: 130 INCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGH 189

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            PNV++Y+T+I+G  K G    A+++F +M+  G   D V+YNT++    K     +A+ 
Sbjct: 190 EPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAME 249

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
              EM   GI  +  TYN ++ G+   G+ +E  R+F++M    V P+ +T + L+D   
Sbjct: 250 FLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLC 309

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G+  EA  +F    + G++ ++  Y+AL+D  C   L+  A  + + M ++G  P V 
Sbjct: 310 KEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVH 369

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESA-NLDAMCSQDDKDVQEAGRTDNQIIKV 604
           +YN +I+ F +S      +D+ +  L +    A N D +             T + +++ 
Sbjct: 370 SYNILINGFCKSR----RMDEAKSLLAEMYHKALNPDTV-------------TYSTLMQG 412

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
             Q      G+ K+           L +F++M    + PN+VT+S +L+   +    ++A
Sbjct: 413 LCQF-----GRPKEA----------LNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEA 457

Query: 665 SMLLEELR 672
             LL+ ++
Sbjct: 458 LKLLKSMQ 465



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 149/295 (50%)

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           KP+L   N    +     +     +  F  M+R   +P    F   L   ++   +    
Sbjct: 49  KPSLPQNNGGFVSNNSTNISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVV 108

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           +L N+M   G+  ++++ N L++ +C+   +D A  I+ +M    I P   T++ +I+G 
Sbjct: 109 SLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGL 168

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
              G++ +A+ +F+EM   G   + +SYNT+++   K G    A+ V K+ME +G + D 
Sbjct: 169 CNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDV 228

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           VTYN ++    K    ++      +M    + PN+ TY+ ++  +   G   EA ++F+E
Sbjct: 229 VTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKE 288

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
                +  D V  + L+D LCK G+V  A  + + MT++G+ PN+ TYN+++D +
Sbjct: 289 MVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGY 343



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 161/327 (49%), Gaps = 5/327 (1%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
           G+ ++A + F   V R+   +      + ++  L + G V  A+ +FET   +G    + 
Sbjct: 277 GQLNEATRLFKEMVGRDVMPDTVT--LTILVDGLCKEGMVSEARLVFETMTEKGVEPNIS 334

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
            ++AL+  Y       EA  VF  M R    P + +YN +I+  C    +D      +  
Sbjct: 335 TYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMD--EAKSLLA 392

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +M    + PD +T+++L+    + G  + A N+F EM   G+  ++ TY+ LLD  CK  
Sbjct: 393 EMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHG 452

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            +D A +++  M  K + PN+V ++ +I+G   AG+L+ A  +FS++   GI     +Y 
Sbjct: 453 HLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYT 512

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            ++    K G  +EA  + ++ME  G   ++ +YN ++ G+ +        R+ ++M   
Sbjct: 513 VMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGK 572

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             S NL T+  L+D+ S+  +  + M+
Sbjct: 573 RFSANLSTFQMLLDLESQDEIISQFMR 599


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 227/464 (48%), Gaps = 32/464 (6%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G   LA + +    +       Y  + ++  Y ++    +  +V + M++  + P++V
Sbjct: 72  RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 131

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           T+N ++DA  + G D +  + + D M+  G++P  +T+NS+L    R G+W+ A  +F E
Sbjct: 132 THNVMVDARFRAG-DAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKE 190

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G+  D+ ++  L+   C+  +++ A +I  EM  + I P++V++S +I  +A+ G+
Sbjct: 191 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 250

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +D A+    EM+  G+  D V Y  V+  + + G   +AL V  EM   G   D VTYN 
Sbjct: 251 MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT 310

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           LL G  K+ +  +   +  +M+   V P+L T++TLI  Y   G   +A+Q+F       
Sbjct: 311 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 370

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           L+ D+V Y+ LID +C+ G ++ A  L D+M    I PN VTY+ +ID       + C  
Sbjct: 371 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILID-------SHCEK 423

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
             VE   G   E  N         K +     T N IIK  G   +    +G+K      
Sbjct: 424 GQVEDAFGFLDEMIN---------KGILPNIMTYNSIIK--GYCRSGNVSKGQK------ 466

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
                    QKM   K+ P+++T++ +++   + +   DA  LL
Sbjct: 467 -------FLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 503



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 245/503 (48%), Gaps = 36/503 (7%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFA----FAVKREERKNDQGKLASAMISILGRLGKVD 210
           G   Y  +L+ L   G W KA + F     F V  + R        + +I    R+G+++
Sbjct: 164 GIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS------FTILIGGFCRVGEIE 217

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
            A  I++   + G    + +FS LI  + R G    A++    M+ + L P+ V Y  VI
Sbjct: 218 EALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVI 277

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRG 329
               + G+     + + D+M+  G  PD +T+N+LL  +C    L +A   L NEM  RG
Sbjct: 278 GGFCRAGL-MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA-EGLLNEMRERG 335

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  D+ T+ TL+   C   ++D A ++   M  + + P++VTY+T+IDG  + G LD A 
Sbjct: 336 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 395

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
           +++ +M    I  + V+Y+ ++  + + G+ E+A     EM + GI  + +TYN+++ GY
Sbjct: 396 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 455

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            + G   + ++  ++M  + VSP+L+TY+TLI  Y K     +A ++    ++  ++ DV
Sbjct: 456 CRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDV 515

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           V Y+ LI+    +G V+ A  + ++M  +GI P+  TY S+I+    +            
Sbjct: 516 VTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTA------------ 563

Query: 570 DLGKQKESANL-DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
             G  KE+  L D M  +  +  + AG    Q + +      + + +  K+     ++ C
Sbjct: 564 --GNSKEAFQLHDEMLQRGKEKRRAAGTV--QFVNI------QNSAESLKQMPMDLKVTC 613

Query: 629 ILGVFQKMHKLKIKPNVVTFSAI 651
            +  F K  +  I+     F A+
Sbjct: 614 SIYFFAKTQEFAIRGCAFVFGAL 636



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 184/371 (49%), Gaps = 34/371 (9%)

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           R G    A + +  +     + + +T N ++   CK  + D    +++EM  + + P+VV
Sbjct: 72  RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 131

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           T++ M+D   +AG  + A+ +   M   G+    V+YN+VL    + G +++A  V KEM
Sbjct: 132 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 191

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           +  G+  D  ++  L+GG+ + G+ +E  +++++M+   + P+L+++S LI ++++ G  
Sbjct: 192 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 251

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             AM   RE +  GL  D V+Y+ +I   C+ GL+  A+ + DEM   G  P+VVTYN++
Sbjct: 252 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 311

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
           ++   +    E  + D E  L + +E      +C+                   F  L+ 
Sbjct: 312 LNGLCK----ERRLLDAEGLLNEMRERGVPPDLCT-------------------FTTLIH 348

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
               +GK +          L +F  M   +++P++VT++ +++   R    + A+ L ++
Sbjct: 349 GYCIEGKLDK--------ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDD 400

Query: 671 L---RLFDNQV 678
           +    +F N V
Sbjct: 401 MHSREIFPNHV 411


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 194/361 (53%), Gaps = 2/361 (0%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           K    +I+ L +  K  LA  + E       G+ V+ +  +I +  + G   EA+ +F+ 
Sbjct: 113 KTYGILINGLCKARKTGLAIKLHEKMKGNCKGD-VFTYGMIIDSLCKDGMTTEALDMFSE 171

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           M    + P++V Y++++D   + G   K  +E F +M   G+  D  T+NSL+   SR G
Sbjct: 172 MIGAGILPDVVVYSSLMDGLCRFG-RLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAG 230

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           LW+      N MV RG   D FT+  L+D +CK  ++  A +I+  M  K   P+++TY+
Sbjct: 231 LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYN 290

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+++G    G+L+DA  +F  +   GI L+  SYN +++ Y K  + +EA  + +EM   
Sbjct: 291 TLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPK 350

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G++   VTYN L+G   + G+    +++F +M+       L TY  L+D   K G  +EA
Sbjct: 351 GLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEA 410

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           + +F+  K+   K ++ ++S L+D +C+ G +E A    DE++K G+ P+ + YN +I+ 
Sbjct: 411 IDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILING 470

Query: 554 F 554
            
Sbjct: 471 L 471



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 187/354 (52%), Gaps = 3/354 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L + G    A ++F   +  G    V  +S+L+    R G  +EA+  F  M+   
Sbjct: 152 IIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 211

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
           +  ++ TYN++I    + G+ +K V    + M+  G  PD  TF  L+  +C  G + EA
Sbjct: 212 ISADVYTYNSLIHGLSRAGL-WKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 270

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
            + +   M H+G + DI TYNTL++ +C   Q++ A ++   +  + I  NV +Y+ +I+
Sbjct: 271 -QQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 329

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GY K  ++D+A  +F EM+  G+    V+YNT++    + GR   A  +  EM++ G   
Sbjct: 330 GYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 389

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
              TY  LL G  K G  +E   +F+ +K     PN+  +S L+D   + G  +EA + F
Sbjct: 390 KLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQF 449

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            E  + GL+ D + Y+ LI+ LC  G++  AV LL +M ++G  P+ +T+N II
Sbjct: 450 DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVII 503



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 179/350 (51%), Gaps = 2/350 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  +F+    +G       +  LI+   ++     AI +   MK  N K ++ TY  +ID
Sbjct: 96  AVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCKGDVFTYGMIID 154

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           +  K G+     +++F +M+  G+ PD + ++SL+    R G  + A   F EM  RGI 
Sbjct: 155 SLCKDGMT-TEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 213

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D++TYN+L+  + +          +  M  +  SP+  T++ +IDG  K G++ +A  +
Sbjct: 214 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 273

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
              M   G   D ++YNT+++    +G+ E+A  + + +   GI+ +  +YN L+ GY K
Sbjct: 274 LELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 333

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
             K DE  R+FE+M+   + P+ +TY+TLI    + G  + A ++F E +  G    +  
Sbjct: 334 DQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLST 393

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           Y  L+D LCKNG +E A+ L   + K   +PN+  ++ ++D   R+   E
Sbjct: 394 YCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLE 443



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 176/348 (50%), Gaps = 3/348 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S+++  L R G++  A   F+     G    VY +++LI    R+G  +E     N M  
Sbjct: 185 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 244

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               P+  T+  +ID  C +G V      +I + M   G +PD +T+N+L+      G  
Sbjct: 245 RGFSPDAFTFTILIDGLCKEGKVG--EAQQILELMHHKGKEPDILTYNTLMNGLCLVGQL 302

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  LF  +  RGI  ++F+YN L++  CK  ++D AF +  EM  K + P+ VTY+T+
Sbjct: 303 EDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTL 362

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I    ++GR+  A  +F EM+  G  L   +Y  +L    K G  EEA+ + + ++ +  
Sbjct: 363 IGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEH 422

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + +   ++ LL G  + GK +E  + F+++  + + P+ + Y+ LI+     G+  EA++
Sbjct: 423 KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVK 482

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           +  + ++ G   D + ++ +I  L K   +  A+ LL+EM      P+
Sbjct: 483 LLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 530



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 211/471 (44%), Gaps = 34/471 (7%)

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG--- 276
           L  G+       + L+          +A+ +F+ M    L  +  TY  +I+   K    
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G+  K       + ++   + D  T+  ++    + G+   A ++F+EM+  GI  D+  
Sbjct: 129 GLAIK-----LHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVV 183

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y++L+D +C+  ++  A E   EM  + IS +V TY+++I G ++AG   +     + M 
Sbjct: 184 YSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 243

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G   D  ++  ++    K G+  EA  + + M   G   D +TYN L+ G    G+ +
Sbjct: 244 DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLE 303

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           +  ++FE +    +  N+ +Y+ LI+ Y K     EA ++F E +  GLK   V Y+ LI
Sbjct: 304 DATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLI 363

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
            ALC++G V +A  L  EM   G    + TY  ++D   ++   E  + D+ + + K + 
Sbjct: 364 GALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAI-DLFQSIKKTEH 422

Query: 577 SAN-------LDAMCSQDDKDVQEAGRTDNQIIK--------VFGQLVAEKAGQGKKENR 621
             N       LD MC      ++EA +  ++I K         +  L+     +G     
Sbjct: 423 KPNIEVFSILLDGMCRAG--KLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEA 480

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            +        +  +M +    P+ +TF+ I+    + N   +A  LLEE+R
Sbjct: 481 VK--------LLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMR 523



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 174/366 (47%), Gaps = 8/366 (2%)

Query: 123 VVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFA 180
           VV    +  +  F R   +L +  K+ E +   AD YT+  L+  L   G W +      
Sbjct: 182 VVYSSLMDGLCRFGRLKEAL-EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLN 240

Query: 181 FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
             V R    +      + +I  L + GKV  A+ I E   ++G    +  ++ L++    
Sbjct: 241 LMVDRGFSPD--AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCL 298

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDR 299
            G  ++A  +F S+    +K N+ +YN +I+  C    +D      +F++M   G++P  
Sbjct: 299 VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKID--EAFRLFEEMRPKGLKPST 356

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           +T+N+L+    + G    A+ LF EM   G    + TY  LLD +CK   ++ A ++   
Sbjct: 357 VTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQS 416

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           +      PN+  +S ++DG  +AG+L++A   F E+   G+  D ++YN +++     G 
Sbjct: 417 IKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGM 476

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
             EA+ +  +ME  G   D++T+N ++    K+ +  E  ++ E+M+    SP+    S 
Sbjct: 477 LSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSM 536

Query: 480 LIDVYS 485
           L+ + S
Sbjct: 537 LLCLAS 542



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 156/343 (45%), Gaps = 36/343 (10%)

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   D V+  T++          +A+ +  EM   G+  DA TY  L+ G  K  K    
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            ++ E+MK +C   ++ TY  +ID   K G+  EA+ +F E   AG+  DVV+YS+L+D 
Sbjct: 132 IKLHEKMKGNC-KGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE-S 577
           LC+ G ++ A+    EM   GI  +V TYNS+I    R+              G  KE +
Sbjct: 191 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRA--------------GLWKEVT 236

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
             L+ M    D+       T   +I   G     K G+ ++             + + MH
Sbjct: 237 WFLNLMV---DRGFSPDAFTFTILID--GLCKEGKVGEAQQ-------------ILELMH 278

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWV 695
               +P+++T++ ++N        EDA+ L E L     ++   ++ +L+ GY +D    
Sbjct: 279 HKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKID 338

Query: 696 QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           +A  LF+E++      ++  YN L   L   G+ R AQ + +E
Sbjct: 339 EAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 381


>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Vitis vinifera]
          Length = 848

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 154/620 (24%), Positives = 284/620 (45%), Gaps = 71/620 (11%)

Query: 74  PNPKPF-----HSL-SPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVV--- 124
           PNP P      HS  SP P S +   P F+  ++     +    + K A+  +  VV   
Sbjct: 5   PNPSPIIFDFPHSTHSPHPKSSN---PTFTTHKTLISCKE---SKSKGALEEKKKVVFVD 58

Query: 125 AEEALHHVTAFARDDVSLGDILKKFEFKLCGADDY------TFLLRELGNRGEWSKAIQC 178
            +   H V+      +   DI K +  ++  AD +      + ++  L     W      
Sbjct: 59  YDNGKHQVSTHV-SGLRKADIPKHYRLRV-EADRFQKDWSVSEVVERLLKLNHWDDVEGL 116

Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE-GYGNTVYAFSALISA 237
               V R  RKN        +I  + ++G ++ +  +F    N+  Y      ++ +I  
Sbjct: 117 LNRWVGRFSRKN-----FPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRL 171

Query: 238 YGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP 297
           + R     +A  +F  M+++  KP+  TYNA+I+A G+ G  ++  + I DDMLR  + P
Sbjct: 172 HARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAG-QWRWAMNIMDDMLRAAIPP 230

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
            R T+N+L+  C   G W+ A N+  +M   G+  D+ T+N +L A  +G Q        
Sbjct: 231 SRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYF 290

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL--DRVSYNTVLSIYA 415
             M   NI P+  T + +I    K G+   A+++F+ MK        D V++ T++ +Y+
Sbjct: 291 ELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYS 350

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
             G+ E        M + G++ + V+YNAL+G Y   G   E   +F ++K +   P+++
Sbjct: 351 VCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVV 410

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           +Y++L++ Y K G  ++AM++F   ++   K ++V Y+ALIDA    GL+  AV +L EM
Sbjct: 411 SYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEM 470

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
            + G++PN+V+  +++ A GR                           C Q  K      
Sbjct: 471 ERNGVQPNIVSICTLLAACGR---------------------------CGQKVKIKSVLS 503

Query: 596 RTDNQIIKV----FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
             + + IK+    +   +      G+ +          L +++ M   K+KP+ VT++ +
Sbjct: 504 AAELRGIKLNTTAYNSAIGSYLSVGEYDK--------ALSLYRAMRTKKVKPDPVTYNVL 555

Query: 652 LNACSRCNSFEDASMLLEEL 671
           ++ C + + + +A   L+E+
Sbjct: 556 ISGCCKMSKYGEALGFLDEM 575



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 135/536 (25%), Positives = 250/536 (46%), Gaps = 35/536 (6%)

Query: 154 CGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK 213
           C  +D   ++  L  R       +   F +++   K D  +  +A+I+  GR G+   A 
Sbjct: 159 CARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPD-AETYNALINAHGRAGQWRWAM 217

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
           NI +  L      +   ++ LI+A G SG  +EA++V   M    + P+LVT+N V+ A 
Sbjct: 218 NIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAY 277

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID-- 331
            +G   +  V+  F+ M    ++PD  T N ++    + G    A ++FN M  +  +  
Sbjct: 278 KRGN-QYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECY 336

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D+ T+ T++       Q++        M A+ + PN+V+Y+ +I  YA  G   +A ++
Sbjct: 337 PDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSV 396

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F+E+K  G   D VSY ++L+ Y K G+ E+A+ V + M  +  + + V+YNAL+  YG 
Sbjct: 397 FNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGS 456

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           +G   E   +  +M+ + V PN+++  TL+    + G   +   +    +  G+K +   
Sbjct: 457 KGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTA 516

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           Y++ I +    G  + A+SL   M  + ++P+ VTYN +I          C +      L
Sbjct: 517 YNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGC-------CKMSKYGEAL 569

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
           G   E  +L    S++                V+  ++   + QG        ++     
Sbjct: 570 GFLDEMMDLKIPLSKE----------------VYSSVICAYSKQG--------QVTEAES 605

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM 687
           +F KM  +  +P+V+T++A+++A     ++E AS L  E+   D Q   +A   LM
Sbjct: 606 MFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLM 661



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 140/573 (24%), Positives = 249/573 (43%), Gaps = 84/573 (14%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCF------AFAVKREERKNDQGKLASAMISILGRLGKV 209
           A+ Y  L+   G  G+W  A+         A    R    N        +I+  G  G  
Sbjct: 197 AETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNN--------LINACGSSGNW 248

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
             A N+ +     G G  +   + ++SAY R     + +S F  MK  N++P+  T N V
Sbjct: 249 KEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIV 308

Query: 270 I-----------------------DACGKGGVDFKHVVEI-------------FDDMLRN 293
           I                         C    V F  ++ +             F+ ML  
Sbjct: 309 IYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAE 368

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G++P+ +++N+L+   +  G+ + A ++FNE+   G   D+ +Y +LL+A  K  + + A
Sbjct: 369 GLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKA 428

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
            ++   M   +  PN+V+Y+ +ID Y   G L +A+ +  EM+  G+  + VS  T+L+ 
Sbjct: 429 MKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAA 488

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
             + G+  +   V    E  GI+ +   YN+ +G Y   G+YD+   ++  M+   V P+
Sbjct: 489 CGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPD 548

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +TY+ LI    K   Y EA+    E     +     +YS++I A  K G V  A S+  
Sbjct: 549 PVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFT 608

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
           +M   G RP+V+TY ++I A+               D+ +  E A+   +  + D DVQ 
Sbjct: 609 KMKMVGCRPDVITYTAMIHAY---------------DVAENWEKASALFLEMETD-DVQP 652

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
                + +++ F      K GQ  K          +L + + M + KI  N  +F  +++
Sbjct: 653 DSIACSSLMRAFN-----KGGQPAK----------VLVLAEFMREKKIPFNNSSFFEMVS 697

Query: 654 ACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
           ACS    + +   ++  ++L +  +  V+ GLL
Sbjct: 698 ACSLLREWRE---IIGLIKLMEPSISVVSIGLL 727



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 192/390 (49%), Gaps = 36/390 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I      G    A ++F      G+   V ++++L++AYG+SG  ++A+ VF  M+R
Sbjct: 378 NALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRR 437

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL-- 314
            + KPNLV+YNA+IDA G  G+     VEI  +M RNGVQP+ ++  +LLA C R G   
Sbjct: 438 NHCKPNLVSYNALIDAYGSKGL-LTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKV 496

Query: 315 ---------------------------------WEAARNLFNEMVHRGIDQDIFTYNTLL 341
                                            ++ A +L+  M  + +  D  TYN L+
Sbjct: 497 KIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLI 556

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
              CK ++   A   + EM    I  +   YS++I  Y+K G++ +A +MF++MK +G  
Sbjct: 557 SGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCR 616

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D ++Y  ++  Y     +E+A  +  EME+  ++ D++  ++L+  + K G+  +V  +
Sbjct: 617 PDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVL 676

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            E M+   +  N  ++  ++   S    ++E + + +  + +     + L + L+  L K
Sbjct: 677 AEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGK 736

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +G +E+ + L  ++   G   N  TY+ ++
Sbjct: 737 SGKIETMMKLFYKIVASGAEINFYTYSILL 766


>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
 gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
          Length = 1450

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 232/436 (53%), Gaps = 6/436 (1%)

Query: 137 RDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA 196
           + D  + D+L   + ++   D + F+++ +G    W +A + + +   R    +   ++ 
Sbjct: 169 KQDQFVADVLDDRKVQMTPTD-FCFVVKSVGQES-WHRAFEVYEWLNLRH-WYSPNARML 225

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++++LG+  +  LA  +F  A      NTV  ++A++  Y RSG   +   +F+ M+ 
Sbjct: 226 STILAVLGKANQEPLAVEVFTRA-EPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRE 284

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHV-VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              +P+LV++N +I+A  K G    ++ +E+  ++ R+G++PD IT+N+L++ CSR    
Sbjct: 285 RGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNL 344

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A N+F++MV    + D++TYN ++    +      A ++  ++ ++   P+ V+Y++ 
Sbjct: 345 EEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSF 404

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +  +A+ G ++   ++  EM  +G G D ++YNT++ +Y K G+ + AL + ++M+SSG 
Sbjct: 405 LYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGR 464

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D +TY  L+   GK  K +E   M  +M    V P L TYS LI  Y+K G   EA +
Sbjct: 465 NPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEE 524

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            F    ++G + D + YS ++D   +    + A++   EM  +GI P    Y  ++   G
Sbjct: 525 TFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRTLG 584

Query: 556 RSATTECTVDDVERDL 571
            +   E  +  V RD+
Sbjct: 585 NANKVE-DIGRVVRDM 599



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 179/389 (46%), Gaps = 42/389 (10%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           +L  LG   +   A++ F  A   E    +  K+ +AM+ +  R GK +  + +F+    
Sbjct: 228 ILAVLGKANQEPLAVEVFTRA---EPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRE 284

Query: 222 EGYGNTVYAFSALISAYGRSGYCQE--AISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
            G    + +F+ LI+A  ++G      AI +   ++R  L+P+++TYN +I AC +   +
Sbjct: 285 RGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRAS-N 343

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN---------------- 323
            +  V +FDDM+ +  +PD  T+N++++V  R GL   A  LFN                
Sbjct: 344 LEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNS 403

Query: 324 -------------------EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
                              EMV  G  +D  TYNT++    K  Q DLA ++  +M +  
Sbjct: 404 FLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSG 463

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
            +P+V+TY+ +ID   K  ++++A  M SEM   G+     +Y+ ++  YAK G+  EA 
Sbjct: 464 RNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAE 523

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
                M  SG R D + Y+ +L  + +  +       +++M  D + P    Y  ++   
Sbjct: 524 ETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRTL 583

Query: 485 SKGGLYKEAMQIFREFKQA-GLKADVVLY 512
                 ++  ++ R+ ++  G+    + Y
Sbjct: 584 GNANKVEDIGRVVRDMEEVCGMNPQAISY 612



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 153/738 (20%), Positives = 293/738 (39%), Gaps = 145/738 (19%)

Query: 195  LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
            +  A++ +L +  ++D A   +  +   G+  +   F ALI     +    EA  VF+ M
Sbjct: 676  ITEALVVMLCKAQQLDTALKEYSNSRELGFTGSFTMFEALIQCCLENELFTEASQVFSDM 735

Query: 255  KRYNLKP------------------------------------NLVTYNAVIDACGKGGV 278
            +   +K                                     N+  Y  VI+A G+  +
Sbjct: 736  RFCGIKASECLYQSMMLLYCKMGFPETAHHLIDLTETDGTVLNNISVYVDVIEAYGRLKL 795

Query: 279  DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             ++    +  +M ++ +  +R  +N+L+   +  G +E AR +FN M+  G    + + N
Sbjct: 796  -WQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMMKDGPSPTVDSIN 854

Query: 339  TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG--------------- 383
             LL A+    +++  + ++ E+       +  +   M+D +A+AG               
Sbjct: 855  GLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAA 914

Query: 384  --------------------RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
                                ++ D   M SEM+  G   D   +N+VL +Y  +  F + 
Sbjct: 915  GYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKT 974

Query: 424  LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
              + + ++  G+  D  TYN L+  Y +  +  E   + ++M+   + P L TY +L+  
Sbjct: 975  TQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVAS 1034

Query: 484  YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            + K  L ++A ++F E +  G K D   Y  ++     +G    A  L   M  EG+ P 
Sbjct: 1035 FGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPT 1094

Query: 544  VVTYNSIIDAFGRSATTECTVDDVERDLGKQKES-ANLDAMCSQDDKDVQEAGRTDNQII 602
            + T + ++ ++G S   +    + E+ L   KE+ ANL  +               + +I
Sbjct: 1095 IATMHLLMVSYGSSGQPQ----EAEKVLSNLKETDANLSTL-------------PYSSVI 1137

Query: 603  KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK---IKPNVVTFSAILNACSRCN 659
              + +     AG                   QK+ ++K   ++P+   ++  + A S   
Sbjct: 1138 DAYVRNGDYNAG------------------IQKLKQVKEEGLEPDHRIWTCFIRAASLSQ 1179

Query: 660  SFEDASMLLEELRL--FDNQVYGVAHGLLMGYRDNIWVQALSL-FDEVKLMDSSTASAFY 716
               +A +LL  LR   FD  +       L+  +    V AL L  + ++ +  + A  F 
Sbjct: 1180 HTSEAILLLNALRDTGFDLPIR------LLTEKPEPLVSALDLCLEMLETLGDNAAFNFV 1233

Query: 717  NALTDMLWHFGQKRGAQLVVLEGKRRQVW--------ENVWSESCLDLHLMSSGAARAMV 768
            NAL D+LW F  +  A  V L   +R+++        +  W     D   +S GAA    
Sbjct: 1234 NALEDLLWAFELRATASWVFLLAIKRKIYRHDVFRVADKDWGA---DFRKLSGGAA---- 1286

Query: 769  HAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCN 828
                  + + +    E PK ++++TG  +++ V  D  L+      L  MG+PF      
Sbjct: 1287 ------LDASLQGCPESPKSVALITGTAEYNMVSLDSTLK----ACLWEMGSPFLPCKTR 1336

Query: 829  LGRFISTGPMVASWLRES 846
             G  I+    +  WL++S
Sbjct: 1337 SGLLIAKAHSLKMWLKDS 1354



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/367 (22%), Positives = 165/367 (44%), Gaps = 1/367 (0%)

Query: 194  KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
            K+ +A+I      G  + A+ +F T + +G   TV + + L+ A    G  +E   V   
Sbjct: 816  KVWNALIEAYAASGCYERARAVFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQE 875

Query: 254  MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            ++    K +  +   ++DA  + G  F+ V +I+  M   G  P    +  +  +  RG 
Sbjct: 876  LQDIGFKISKSSILLMLDAFARAGNIFE-VKKIYHGMKAAGYFPSMHLYRVMAQLLCRGK 934

Query: 314  LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
                   + +EM   G   D+  +N++L             +I   +    + P+  TY+
Sbjct: 935  QVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYN 994

Query: 374  TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
             +I  Y +  R  + L +  EM+ +G+     +Y ++++ + K    E+A  + +E++S+
Sbjct: 995  ILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQST 1054

Query: 434  GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            G + D   Y+ ++  Y   G + + +R+F  MK + V P + T   L+  Y   G  +EA
Sbjct: 1055 GCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEA 1114

Query: 494  MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             ++    K+       + YS++IDA  +NG   + +  L ++ +EG+ P+   +   I A
Sbjct: 1115 EKVLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIWTCFIRA 1174

Query: 554  FGRSATT 560
               S  T
Sbjct: 1175 ASLSQHT 1181



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 114/480 (23%), Positives = 210/480 (43%), Gaps = 43/480 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI + G+ G+ DLA  ++    + G    V  ++ LI + G++   +EA  + + M  
Sbjct: 437 NTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLN 496

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +KP L TY+A+I    K G   +   E FD MLR+G +PD++ ++ +L +  R    +
Sbjct: 497 TGVKPTLRTYSALICGYAKAGKPVE-AEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPK 555

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP-AKNISPNVVTYSTM 375
            A   + EM+H GI  +   Y  +L  +    +++    ++ +M     ++P  ++Y  +
Sbjct: 556 RAMTFYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRDMEEVCGMNPQAISYILV 615

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
                K    D+A  M          +DR +  ++LS Y+  GR   AL + + ++    
Sbjct: 616 -----KGDCYDEAAKMLRRAISDRYEIDRENLLSILSSYSSSGRHSVALDLLELLKEHTP 670

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R   +   AL+    K  + D   + +   +    + +   +  LI    +  L+ EA Q
Sbjct: 671 RSSQMITEALVVMLCKAQQLDTALKEYSNSRELGFTGSFTMFEALIQCCLENELFTEASQ 730

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG-IRPNVVTYNSIIDAF 554
           +F + +  G+KA   LY +++   CK G  E+A  L+D    +G +  N+  Y  +I+A+
Sbjct: 731 VFSDMRFCGIKASECLYQSMMLLYCKMGFPETAHHLIDLTETDGTVLNNISVYVDVIEAY 790

Query: 555 GRSATTECTVDDVERDLGKQKES--ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
           GR              L ++ ES   N+   C   ++             KV+  L+   
Sbjct: 791 GR------------LKLWQKAESVAGNMRQSCITVNR-------------KVWNALIEAY 825

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           A  G  E R R        VF  M K    P V + + +L A       E+  ++++EL+
Sbjct: 826 AASGCYE-RAR-------AVFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQ 877



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 142/278 (51%), Gaps = 23/278 (8%)

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           +T+L++  K  +   A+ V    E S +      YNA++G Y + GK+++V+ +F+ M+ 
Sbjct: 226 STILAVLGKANQEPLAVEVFTRAEPS-VENTVKVYNAMMGVYARSGKFNKVQELFDLMRE 284

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKE--AMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
               P+L++++TLI+   K G      A+++  E +++GL+ D++ Y+ LI A  +   +
Sbjct: 285 RGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNL 344

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR---SATTECTVDDVE-RDLGKQKESANLD 581
           E AV++ D+M      P++ TYN++I  +GR   S   E   +D+E R       S N  
Sbjct: 345 EEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSF 404

Query: 582 AMCSQDDKDVQEAGRTDNQIIKV-FGQ-------LVAEKAGQGKKENRCRQEILCILGVF 633
                 + +V++      +++K+ FG+       ++     QG+ +          L ++
Sbjct: 405 LYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQND--------LALQLY 456

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           + M      P+V+T++ ++++  + N  E+A+ ++ E+
Sbjct: 457 RDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEM 494


>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
 gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
          Length = 668

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 223/488 (45%), Gaps = 68/488 (13%)

Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
           RE R      L S +IS   R    D A  +  +A   G      A +ALISA G +G  
Sbjct: 220 RESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRV 279

Query: 245 QEAISVF-NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
            EA ++F        +KP    YNA++    + G   K+  ++ D+M + GV PD  T++
Sbjct: 280 AEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIG-SLKNAEQVLDEMSQCGVAPDEATYS 338

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
            L+   +R G WE+AR L  EM   G+    + ++ +L           AF ++ EM A 
Sbjct: 339 LLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS 398

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
            + P+   Y+ MID + K   L  A++ F  M+   I  D V++NT++  + K GR + A
Sbjct: 399 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRA 458

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
           + + +EM  S       TYN ++   G+Q +++ V  M  +MK   + PN++TY+TL+DV
Sbjct: 459 MELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDV 518

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y + G YKEA+      K  GLK    +Y AL++A  + GL + A++++  M  +G+  +
Sbjct: 519 YGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVS 578

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           ++  NS+I+AFG                                          D ++++
Sbjct: 579 ILVLNSLINAFGE-----------------------------------------DRRVVE 597

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
            F  L      Q  KEN                    ++P+V+T++ ++ A  R   F+ 
Sbjct: 598 AFSVL------QFMKEN-------------------GLRPDVITYTTLMKALIRVEQFDK 632

Query: 664 ASMLLEEL 671
             ++ EE+
Sbjct: 633 VPVIYEEM 640



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 184/382 (48%), Gaps = 35/382 (9%)

Query: 197 SAMISILGRLGKVDLAKNIF-ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           +A+IS LG  G+V  A+ +F E  L         A++AL+  Y R G  + A  V + M 
Sbjct: 267 TALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMS 326

Query: 256 RYNLKPNLVTYNAVIDACGKGGV----------------------------------DFK 281
           +  + P+  TY+ ++DA  + G                                   D++
Sbjct: 327 QCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQ 386

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
               +  +M  +GV+PDR  +N ++    +      A + F+ M    I+ D+ T+NTL+
Sbjct: 387 KAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLI 446

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           DA CKG + D A E+  EM   N  P   TY+ MI+   +  R +    M SEMK  G+ 
Sbjct: 447 DAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLV 506

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + ++Y T++ +Y + GR++EA+   + M++ G++     Y+AL+  Y ++G  D    +
Sbjct: 507 PNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNV 566

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            + MKAD +  ++L  ++LI+ + +     EA  + +  K+ GL+ DV+ Y+ L+ AL +
Sbjct: 567 VKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIR 626

Query: 522 NGLVESAVSLLDEMTKEGIRPN 543
               +    + +EM   G  P+
Sbjct: 627 VEQFDKVPVIYEEMITSGCAPD 648



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 167/323 (51%), Gaps = 5/323 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++    R G+ + A+ + +    +G   + Y FS +++ +   G  Q+A +V   M+ 
Sbjct: 338 SLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQA 397

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P+   YN +ID  GK      H ++ FD M    ++PD +T+N+L+    +GG  +
Sbjct: 398 SGVRPDRHFYNVMIDTFGKYNC-LGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHD 456

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF EM          TYN +++ + +  + +    +++EM  + + PN++TY+T++
Sbjct: 457 RAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLV 516

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y ++GR  +A++    MK  G+      Y+ +++ YA+ G  + AL V K M++ G+ 
Sbjct: 517 DVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLE 576

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              +  N+L+  +G+  +  E   + + MK + + P+++TY+TL+    +   + +   I
Sbjct: 577 VSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVI 636

Query: 497 FREFKQAGL----KADVVLYSAL 515
           + E   +G     KA  +L SAL
Sbjct: 637 YEEMITSGCAPDRKARAMLRSAL 659



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 179/380 (47%), Gaps = 35/380 (9%)

Query: 297 PDRITFNSLLA-VCSRGGLWEAA--RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           PD  +++ LLA + +     +AA    L  ++    ++ D   ++ L+ A  + A  D A
Sbjct: 188 PDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFARAALPDAA 247

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV-SYNTVLS 412
            E++A   A  ++P     + +I     AGR+ +A  +F E    G    R  +YN +L 
Sbjct: 248 LELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLK 307

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
            Y ++G  + A  V  EM   G+  D  TY+ L+  Y + G+++  R + ++M+AD V P
Sbjct: 308 GYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKP 367

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           +   +S ++  +   G +++A  + RE + +G++ D   Y+ +ID   K   +  A+   
Sbjct: 368 SSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAF 427

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQ 592
           D M +E I P+VVT+N++IDA  +    +  ++  E    + +ES            +  
Sbjct: 428 DRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFE----EMRES------------NCP 471

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
               T N +I + G+       Q + E         +  +  +M +  + PN++T++ ++
Sbjct: 472 PGTTTYNIMINLLGE-------QERWEG--------VEAMLSEMKEQGLVPNIITYTTLV 516

Query: 653 NACSRCNSFEDASMLLEELR 672
           +   R   +++A   +E ++
Sbjct: 517 DVYGRSGRYKEAIDCIEAMK 536



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 169/403 (41%), Gaps = 90/403 (22%)

Query: 367 PNVVTYSTMIDGYAKAGRLDDAL---NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
           P++ +YS ++          DA     +  +++   +  D   ++ ++S +A+    + A
Sbjct: 188 PDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFARAALPDAA 247

Query: 424 LLVCKEMESSGI--RKDAVTYNALLGGYGKQGKYDEVRRMF-EQMKADCVSPNLLTYSTL 480
           L +    ++ G+  R +AVT  AL+   G  G+  E   +F E   A  + P    Y+ L
Sbjct: 248 LELLASAQAIGLTPRSNAVT--ALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNAL 305

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           +  Y + G  K A Q+  E  Q G+  D   YS L+DA  + G  ESA  LL EM  +G+
Sbjct: 306 LKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGV 365

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGK-QKESANLDAMCSQDDKDVQEAG-RTD 598
           +P+   ++ I+  F              RD G  QK  A L        +++Q +G R D
Sbjct: 366 KPSSYVFSRILAGF--------------RDRGDWQKAFAVL--------REMQASGVRPD 403

Query: 599 ----NQIIKVFGQLVAEKAGQGKKENRCRQEILCI---LGVFQKMHKLKIKPNVVTFSAI 651
               N +I  FG           K N       C+   +  F +M + +I+P+VVT++ +
Sbjct: 404 RHFYNVMIDTFG-----------KYN-------CLGHAMDAFDRMREEEIEPDVVTWNTL 445

Query: 652 LNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSST 711
           ++A   C                             G  D    +A+ LF+E++  +   
Sbjct: 446 IDA--HCKG---------------------------GRHD----RAMELFEEMRESNCPP 472

Query: 712 ASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
            +  YN + ++L    +  G + ++ E K + +  N+ + + L
Sbjct: 473 GTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTL 515



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 3/141 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+   G  G + +AI C   A+K +  K     +  A+++   + G  D A N+ + 
Sbjct: 512 YTTLVDVYGRSGRYKEAIDCIE-AMKADGLKPSP-TMYHALVNAYAQRGLADHALNVVKA 569

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G   ++   ++LI+A+G      EA SV   MK   L+P+++TY  ++ A  +   
Sbjct: 570 MKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVE- 628

Query: 279 DFKHVVEIFDDMLRNGVQPDR 299
            F  V  I+++M+ +G  PDR
Sbjct: 629 QFDKVPVIYEEMITSGCAPDR 649


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 243/481 (50%), Gaps = 38/481 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFE-TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           + MI  L + G+++ A  +++  A++ G+  TV  +S LI    R     +   +   M 
Sbjct: 69  NTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMA 128

Query: 256 RYNLKPNLVTYNAVIDAC-GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
                PN VTYN +++A  G+G    K    + + M  NG  P+ ITF  ++    + G 
Sbjct: 129 GRGCAPNAVTYNTLVNALLGQG--RSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGE 186

Query: 315 WEAARNLFNEM--VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            EAA  + +EM  +  G+  D+ T+N++LD +CK  ++  A  +      +   PNVVTY
Sbjct: 187 IEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTY 246

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           ST+IDG +K  ++D+AL + ++M  LG   + V+Y+TV+    K+GR E+A++V ++M  
Sbjct: 247 STLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRD 306

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           +G   DAVTYN L+ G+ K+ +  E   +  +M      P+++TY+TL     + G + E
Sbjct: 307 AGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDE 366

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK-EGIRPNVVTYNSII 551
           A++I       G   + + YS+++D LCK G V  A+   ++M + E + P+V+ Y+++I
Sbjct: 367 AVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALI 426

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
           D   ++   +   + +ER +                      AGR  + +   F  L+  
Sbjct: 427 DGLCKAGKIDEAYEFLERMI---------------------RAGRIPDVV--TFSILING 463

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               G+ +          L +F+ M +    P++VT++ +++   R +  ++A  L +++
Sbjct: 464 LCDAGRIDTG--------LELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQM 515

Query: 672 R 672
           R
Sbjct: 516 R 516



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 200/430 (46%), Gaps = 78/430 (18%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L R  +VD    + E     G       ++ L++A    G  +EA S+   M  
Sbjct: 105 STLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAA 164

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVD--FKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
               P L+T+  +I   C +G ++  F+ V E+F  M+ +G+ PD ITFNS+L  +C   
Sbjct: 165 NGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMF--MIESGLSPDVITFNSVLDGLCKEQ 222

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            + +A  N+F   + RG   ++ TY+TL+D + K A+MD A +++A+M       N VTY
Sbjct: 223 RILDA-HNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTY 281

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL--------------- 417
           ST++DG  K GR++DA+ +  +M+  G   D V+YNT++  + K                
Sbjct: 282 STVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 341

Query: 418 --------------------GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
                               GRF+EA+ +   M + G   +A+TY++++ G  K G+  E
Sbjct: 342 AGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 401

Query: 458 VRRMFEQMKAD-CVSPNLLTYSTLIDVYSKGGLYKEA----------------------- 493
               FE+M  D  V+P+++ YS LID   K G   EA                       
Sbjct: 402 ALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILI 461

Query: 494 ------------MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
                       +++FR   + G   D+V Y+ L+D LC+   V+ A  L  +M  +G+ 
Sbjct: 462 NGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLS 521

Query: 542 PNVVTYNSII 551
           P+  T  ++I
Sbjct: 522 PDRSTRRTMI 531



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 198/436 (45%), Gaps = 53/436 (12%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           + +F  M+   + PD +T+ +L+    +    + A +LF E   +G    + TYNT++D 
Sbjct: 15  ITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDG 74

Query: 344 ICKGAQMDLAFEIMAEMPAK-NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           +CK  +++ A  +  +M       P VVTYST+IDG  +   +D    +  EM   G   
Sbjct: 75  LCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAP 134

Query: 403 DRVSYNTVLSIYAKLGRFEEALL-----------------------VCKE---------- 429
           + V+YNT+++     GR +EA                         +CKE          
Sbjct: 135 NAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVV 194

Query: 430 ----MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
               M  SG+  D +T+N++L G  K+ +  +   +F++       PN++TYSTLID  S
Sbjct: 195 DEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLS 254

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K     EA+Q+  +  + G +A+ V YS ++D L K G +E AV +L +M   G  P+ V
Sbjct: 255 KMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAV 314

Query: 546 TYNSIIDAFGRSATTECTVDDVERDL--GKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           TYN++ID F +       V  +   L  G          +C      +  +GR D + ++
Sbjct: 315 TYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLC----HGLCRSGRFD-EAVE 369

Query: 604 VFGQLVAEKAGQGKKENRCRQEILC-------ILGVFQKMHKLK-IKPNVVTFSAILNAC 655
           +   + A              + LC        LG F+KM + + + P+V+ +SA+++  
Sbjct: 370 ILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGL 429

Query: 656 SRCNSFEDASMLLEEL 671
            +    ++A   LE +
Sbjct: 430 CKAGKIDEAYEFLERM 445



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 4/325 (1%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A N+F+ AL  G    V  +S LI    +     EA+ +   M     + N VTY+ V+D
Sbjct: 227 AHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVD 286

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGI 330
              K G   +  V +   M   G  PD +T+N+L+     R  L EA   L  EM+  G 
Sbjct: 287 GLLKVG-RMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAV-GLLREMLEAGF 344

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
              + TY TL   +C+  + D A EI+  M A+  +PN +TYS+++DG  KAGR+ +AL 
Sbjct: 345 HPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALG 404

Query: 391 MFSEM-KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            F +M +   +    ++Y+ ++    K G+ +EA    + M  +G   D VT++ L+ G 
Sbjct: 405 YFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGL 464

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
              G+ D    +F  M      P+++TY+TL+D   +     EA  +F++ +  GL  D 
Sbjct: 465 CDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDR 524

Query: 510 VLYSALIDALCKNGLVESAVSLLDE 534
                +I  L +    E A  + DE
Sbjct: 525 STRRTMIHGLLEVNRDEDAKRIQDE 549



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 183/366 (50%), Gaps = 17/366 (4%)

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  LF +MV + I  D+ TY  L+D + K  ++  A+++  E  AK   P VVTY+TM
Sbjct: 12  DKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTM 71

Query: 376 IDGYAKAGRLDDALNMFSEMKF-LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           IDG  K GR+++AL ++ +M    G     V+Y+T++    +    ++   + +EM   G
Sbjct: 72  IDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRG 131

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              +AVTYN L+     QG+  E   + EQM A+   P L+T+  +I    K G  + A 
Sbjct: 132 CAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAF 191

Query: 495 QIFRE--FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           ++  E    ++GL  DV+ +++++D LCK   +  A ++     + G RPNVVTY+++ID
Sbjct: 192 RVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLID 251

Query: 553 AFGRSATTECTVDDVERDLGKQKE---SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
              + A     +D+  + L K  E    AN     +  D  + + GR ++ ++ +     
Sbjct: 252 GLSKMA----KMDEALQLLAKMVELGCRANTVTYSTVVDG-LLKVGRMEDAVVVLRQMRD 306

Query: 610 AEKAGQGKKENRC------RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           A         N        RQ +   +G+ ++M +    P+VVT++ + +   R   F++
Sbjct: 307 AGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDE 366

Query: 664 ASMLLE 669
           A  +L+
Sbjct: 367 AVEILD 372



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 163/336 (48%), Gaps = 34/336 (10%)

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++D +CK  ++D A  +  +M  K I P+VVTY  +IDG  K  R+ +A ++F E +  G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS-GIRKDAVTYNALLGGYGKQGKYDEV 458
                V+YNT++    K GR E AL +  +M    G R   VTY+ L+ G  +  + D+ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            ++ E+M     +PN +TY+TL++     G  KEA  +  +    G   +++ +  +I  
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 519 LCKNGLVESAVSLLDE--MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
           LCK G +E+A  ++DE  M + G+ P+V+T+NS++D                   G  KE
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLD-------------------GLCKE 221

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
              LDA      K   E G   N +   +  L+   +   K +          L +  KM
Sbjct: 222 QRILDA--HNVFKRALERGCRPNVV--TYSTLIDGLSKMAKMDE--------ALQLLAKM 269

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            +L  + N VT+S +++   +    EDA ++L ++R
Sbjct: 270 VELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 305



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 144/307 (46%), Gaps = 4/307 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L    +  +A+Q  A  V+   R N      S ++  L ++G+++ A  +   
Sbjct: 246 YSTLIDGLSKMAKMDEALQLLAKMVELGCRANTV--TYSTVVDGLLKVGRMEDAVVVLRQ 303

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + G       ++ LI  + +    +EA+ +   M      P++VTY  +     + G 
Sbjct: 304 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSG- 362

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH-RGIDQDIFTY 337
            F   VEI D M   G  P+ IT++S++    + G    A   F +M     +   +  Y
Sbjct: 363 RFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAY 422

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           + L+D +CK  ++D A+E +  M      P+VVT+S +I+G   AGR+D  L +F  M  
Sbjct: 423 SALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAE 482

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   D V+Y T++    +  R +EA  + ++M S G+  D  T   ++ G  +  + ++
Sbjct: 483 RGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDED 542

Query: 458 VRRMFEQ 464
            +R+ ++
Sbjct: 543 AKRIQDE 549



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 162/372 (43%), Gaps = 61/372 (16%)

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++ G  K  K D+   +F+QM    + P+++TY  LID   K    KEA  +F E +  G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKE-GIRPNVVTYNSIIDAFGR------- 556
               VV Y+ +ID LCK G +E+A++L D+M    G RP VVTY+++ID   R       
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 557 --------------SATTECTVDDVERDLGKQKESANL--------------------DA 582
                         +A T  T+ +     G+ KE+ +L                      
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG-QGKKENRCR-QEILCILGVFQKMHKLK 640
           +C +   +++ A R  +++  +   L  +        +  C+ Q IL    VF++  +  
Sbjct: 181 LCKE--GEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 238

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLE---ELRLFDNQVY--GVAHGLL-MGYRDNIW 694
            +PNVVT+S +++  S+    ++A  LL    EL    N V    V  GLL +G  ++  
Sbjct: 239 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 298

Query: 695 VQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
           V    + D   L D+ T    YN L D    F ++R  + V   G  R++ E  +  S +
Sbjct: 299 VVLRQMRDAGCLPDAVT----YNTLID--GFFKRQRLREAV---GLLREMLEAGFHPSVV 349

Query: 755 DLHLMSSGAARA 766
               +  G  R+
Sbjct: 350 TYTTLCHGLCRS 361


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 192/353 (54%), Gaps = 7/353 (1%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A ++F+  + EG+   V  +  LI+   + G    AI +  SM + N +PN+  Y
Sbjct: 145 GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY 204

Query: 267 NAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           N +ID+  K     + V E   +F +M+  G+ PD  T+NSL+        W+    L N
Sbjct: 205 NTIIDSLCKD----RQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLN 260

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EMV   I  D+ ++NT++DA+CK  ++  A +++ +M  + + PNVVTY+ ++DG+    
Sbjct: 261 EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLS 320

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            +D+A+ +F  M   G   + +SYNT+++ Y K+ R ++A+ +  EM    +  D VTY+
Sbjct: 321 EMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYS 380

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+ G     +  +   +F +M A    PNL+TY  L+D   K     EAM + +  + +
Sbjct: 381 TLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGS 440

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            L  D+ + +  ID +C+ G +E+A  L   ++ +G++P+V TY+ +I+   R
Sbjct: 441 NLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCR 493



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 209/404 (51%), Gaps = 7/404 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +T L+R +   G+  +A+  F   +    R +        +I+ L ++G    A  +  +
Sbjct: 134 FTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTY--GTLINGLCKVGNTSAAIRLLGS 191

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            + +     V+A++ +I +  +     EA ++F+ M    + P++ TYN++I A C    
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL-- 249

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
            ++KHV  + ++M+ + + PD ++FN+++ A+C  G + EA  ++ ++M+ RG++ ++ T
Sbjct: 250 CEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEA-HDVVDKMIQRGVEPNVVT 308

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y  L+D  C  ++MD A ++   M  K   PNV++Y+T+I+GY K  R+D A+ +F EM 
Sbjct: 309 YTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 368

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
              +  D V+Y+T++     + R ++A+ +  EM +     + VTY  LL    K     
Sbjct: 369 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLA 428

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E   + + ++   + P++   +  ID   + G  + A  +F      GL+ DV  YS +I
Sbjct: 429 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 488

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           + LC+ GL++ A  L  EM + G   N   YN+I   F R+  T
Sbjct: 489 NGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNET 532



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 237/536 (44%), Gaps = 81/536 (15%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           F+ L+++  +  +    +S+ + M  + + PN+ T + +I++ C    V F     +   
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGF--AFSVLAK 121

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           +L+ G QPD  TF +L+      G    A +LF++M+  G   D+ TY TL++ +CK   
Sbjct: 122 ILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGN 181

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG-------- 401
              A  ++  M  KN  PNV  Y+T+ID   K  ++ +A N+FSEM   GI         
Sbjct: 182 TSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNS 241

Query: 402 ---------------------------LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
                                       D VS+NTV+    K G+  EA  V  +M   G
Sbjct: 242 LIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRG 301

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  + VTY AL+ G+    + DE  ++F+ M      PN+++Y+TLI+ Y K     +AM
Sbjct: 302 VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAM 361

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +F E  +  L  D V YS LI  LC    ++ A++L  EM      PN+VTY  ++D  
Sbjct: 362 YLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYL 421

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            ++      +      L K  E +NLD        D+Q      + + +  G+L A +  
Sbjct: 422 CKNRYLAEAM-----ALLKAIEGSNLDP-------DIQVNNIAIDGMCRA-GELEAAR-- 466

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR-- 672
                            +F  +    ++P+V T+S ++N   R    ++AS L  E+   
Sbjct: 467 ----------------DLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDEN 510

Query: 673 --LFDNQVYG-VAHGLLMGYRDNIWVQALSLFDEVKL----MDSSTASAFYNALTD 721
               +  +Y  +  G L   R+N   +A+ L  E+       D+ST + F   L+D
Sbjct: 511 GCTLNGCIYNTITRGFL---RNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD 563



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 193/390 (49%), Gaps = 7/390 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   G  S AI+     V++  + N      + +I  L +  +V  A N+F  
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY--NTIIDSLCKDRQVTEAFNLFSE 226

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            + +G    ++ +++LI A       +   ++ N M    + P++V++N V+DA C +G 
Sbjct: 227 MVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGK 286

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           V   H  ++ D M++ GV+P+ +T+ +L+   C    + EA + +F+ MV +G   ++ +
Sbjct: 287 VTEAH--DVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVK-VFDTMVCKGCMPNVIS 343

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YNTL++  CK  ++D A  +  EM  + + P+ VTYST+I G     RL DA+ +F EM 
Sbjct: 344 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 403

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
                 + V+Y  +L    K     EA+ + K +E S +  D    N  + G  + G+ +
Sbjct: 404 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 463

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
             R +F  + +  + P++ TYS +I+   + GL  EA ++FRE  + G   +  +Y+ + 
Sbjct: 464 AARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTIT 523

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
               +N     A+ LL EM   G   +  T
Sbjct: 524 RGFLRNNETSRAIQLLQEMVARGFSADAST 553



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/481 (22%), Positives = 211/481 (43%), Gaps = 38/481 (7%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F+ MLR    P  + FN LL   ++        +L ++M   GI  +I+T + L+++ C 
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  AF ++A++      P+  T++T+I G    G++ +AL++F +M   G   D V+
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVT 168

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T+++   K+G    A+ +   M     + +   YN ++    K  +  E   +F +M 
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              +SP++ TY++LI        +K    +  E   + +  DVV ++ ++DALCK G V 
Sbjct: 229 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 288

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A  ++D+M + G+ PNVVTY +++D         C + +++  +         D M   
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDG-------HCLLSEMDEAVKV------FDTMVC- 334

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
             K       + N +I  + ++             CRQE++               P+ V
Sbjct: 335 --KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELI---------------PDTV 377

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEV 704
           T+S +++        +DA  L  E+         V + +L+ Y  ++    +A++L   +
Sbjct: 378 TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAI 437

Query: 705 KLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAA 764
           +  +        N   D +   G+   A+ +      + +  +VW+ S     +M +G  
Sbjct: 438 EGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYS-----IMINGLC 492

Query: 765 R 765
           R
Sbjct: 493 R 493



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 151/311 (48%), Gaps = 3/311 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V +F+ ++ A  + G   EA  V + M +  ++PN+VTY A++D  C    +D    V++
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMD--EAVKV 328

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           FD M+  G  P+ I++N+L+    +    + A  LF EM  + +  D  TY+TL+  +C 
Sbjct: 329 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 388

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A  +  EM A +  PN+VTY  ++D   K   L +A+ +   ++   +  D   
Sbjct: 389 VERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQV 448

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
            N  +    + G  E A  +   + S G++ D  TY+ ++ G  ++G  DE  ++F +M 
Sbjct: 449 NNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMD 508

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            +  + N   Y+T+   + +      A+Q+ +E    G  AD    +  +  L  +GL +
Sbjct: 509 ENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQ 568

Query: 527 SAVSLLDEMTK 537
           S   +L E  +
Sbjct: 569 SLKQILREFVQ 579


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 227/464 (48%), Gaps = 32/464 (6%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G   LA + +    +       Y  + ++  Y ++    +  +V + M++  + P++V
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 192

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           T+N ++DA  + G D +  + + D M+  G++P  +T+NS+L    R G+W+ A  +F E
Sbjct: 193 THNVMVDARFRAG-DAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKE 251

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G+  D+ ++  L+   C+  +++ A +I  EM  + I P++V++S +I  +A+ G+
Sbjct: 252 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 311

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +D A+    EM+  G+  D V Y  V+  + + G   +AL V  EM   G   D VTYN 
Sbjct: 312 MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT 371

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           LL G  K+ +  +   +  +M+   V P+L T++TLI  Y   G   +A+Q+F       
Sbjct: 372 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 431

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           L+ D+V Y+ LID +C+ G ++ A  L D+M    I PN VTY+ +ID       + C  
Sbjct: 432 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILID-------SHCEK 484

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
             VE   G   E  N         K +     T N IIK  G   +    +G+K      
Sbjct: 485 GQVEDAFGFLDEMIN---------KGILPNIMTYNSIIK--GYCRSGNVSKGQK------ 527

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
                    QKM   K+ P+++T++ +++   + +   DA  LL
Sbjct: 528 -------FLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 564



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 229/464 (49%), Gaps = 37/464 (7%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V   + ++ A  R+G  + A+++ +SM    LKP +VTYN+V+    + G+ +    E+F
Sbjct: 191 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGM-WDKAWEVF 249

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            +M   GV PD  +F  L+    R G  E A  ++ EM HRGI  D+ +++ L+    + 
Sbjct: 250 KEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARR 309

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +MD A   + EM    + P+ V Y+ +I G+ +AG + DAL +  EM   G   D V+Y
Sbjct: 310 GKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTY 369

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           NT+L+   K  R  +A  +  EM   G+  D  T+  L+ GY  +GK D+  ++F+ M  
Sbjct: 370 NTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLN 429

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + P+++TY+TLID   + G   +A  ++ +     +  + V YS LID+ C+ G VE 
Sbjct: 430 QRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVED 489

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT--------ECTVDDVERDL-------- 571
           A   LDEM  +GI PN++TYNSII  + RS           +  V+ V  DL        
Sbjct: 490 AFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIH 549

Query: 572 GKQKESANLDA---MCSQDDKDVQEAGRTDNQIIKVFG-QLVAEKAGQGKKENRCRQEIL 627
           G  KE    DA   +   + + VQ    T N +I  F      ++AG             
Sbjct: 550 GYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW------------ 597

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               +F+KM    I+P+  T+ +++N      + ++A  L +E+
Sbjct: 598 ----IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 637



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 212/404 (52%), Gaps = 13/404 (3%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFA----FAVKREERKNDQGKLASAMISILGRLGKVD 210
           G   Y  +L+ L   G W KA + F     F V  + R        + +I    R+G+++
Sbjct: 225 GIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS------FTILIGGFCRVGEIE 278

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
            A  I++   + G    + +FS LI  + R G    A++    M+ + L P+ V Y  VI
Sbjct: 279 EALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVI 338

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRG 329
               + G+     + + D+M+  G  PD +T+N+LL  +C    L +A   L NEM  RG
Sbjct: 339 GGFCRAGL-MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA-EGLLNEMRERG 396

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  D+ T+ TL+   C   ++D A ++   M  + + P++VTY+T+IDG  + G LD A 
Sbjct: 397 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 456

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
           +++ +M    I  + V+Y+ ++  + + G+ E+A     EM + GI  + +TYN+++ GY
Sbjct: 457 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 516

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            + G   + ++  ++M  + VSP+L+TY+TLI  Y K     +A ++    ++  ++ DV
Sbjct: 517 CRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDV 576

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           V Y+ LI+    +G V+ A  + ++M  +GI P+  TY S+I+ 
Sbjct: 577 VTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 620



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 187/352 (53%), Gaps = 1/352 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R G  D A  +F+   + G    V +F+ LI  + R G  +EA+ ++  M+   +KP+
Sbjct: 236 LCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPD 295

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           LV+++ +I    + G    H +    +M   G+ PD + +  ++    R GL   A  + 
Sbjct: 296 LVSFSCLIGLFARRG-KMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVR 354

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           +EMV  G   D+ TYNTLL+ +CK  ++  A  ++ EM  + + P++ T++T+I GY   
Sbjct: 355 DEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIE 414

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G+LD AL +F  M    +  D V+YNT++    + G  ++A  +  +M S  I  + VTY
Sbjct: 415 GKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTY 474

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           + L+  + ++G+ ++     ++M    + PN++TY+++I  Y + G   +  +  ++   
Sbjct: 475 SILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMV 534

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             +  D++ Y+ LI    K   +  A  LL+ M KE ++P+VVTYN +I+ F
Sbjct: 535 NKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGF 586



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 184/371 (49%), Gaps = 34/371 (9%)

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           R G    A + +  +     + + +T N ++   CK  + D    +++EM  + + P+VV
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 192

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           T++ M+D   +AG  + A+ +   M   G+    V+YN+VL    + G +++A  V KEM
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 252

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           +  G+  D  ++  L+GG+ + G+ +E  +++++M+   + P+L+++S LI ++++ G  
Sbjct: 253 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 312

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             AM   RE +  GL  D V+Y+ +I   C+ GL+  A+ + DEM   G  P+VVTYN++
Sbjct: 313 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 372

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
           ++   +    E  + D E  L + +E      +C+                   F  L+ 
Sbjct: 373 LNGLCK----ERRLLDAEGLLNEMRERGVPPDLCT-------------------FTTLIH 409

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
               +GK +          L +F  M   +++P++VT++ +++   R    + A+ L ++
Sbjct: 410 GYCIEGKLDK--------ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDD 461

Query: 671 L---RLFDNQV 678
           +    +F N V
Sbjct: 462 MHSREIFPNHV 472


>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Brachypodium distachyon]
          Length = 675

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 233/515 (45%), Gaps = 69/515 (13%)

Query: 159 YTFLLRELGN-RGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           Y+ LL  L N R     AI        RE R      L S +IS   R    D A ++  
Sbjct: 200 YSHLLASLLNTRDPPDAAILERLLGDLRESRLEPDAPLFSDLISAFARAALPDAALDLLA 259

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRYNLKPNLVTYNAVIDACGKG 276
           +A   G      A +ALISA G +G   EA ++F        +KP    YNA++    K 
Sbjct: 260 SAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKI 319

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G   K+  ++ D+M   GV PD  T++ L+   +R G WE+AR L  EM   G+    + 
Sbjct: 320 G-SLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYV 378

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           ++ +L           AF ++ EM A  + P+   Y+ MID + K   L  A++ F+ M+
Sbjct: 379 FSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMR 438

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             GI  D V++NT++  + K GR + A+ + +EM  S       TYN ++   G+Q ++ 
Sbjct: 439 EEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWV 498

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
            V  M  +MK   + PN++TY+TL+DVY + G +KEA++     K  GLK    +Y AL+
Sbjct: 499 GVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALV 558

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
           +A  + GL + A++++  M  +G+  + V  NS+++AFG                     
Sbjct: 559 NAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGE-------------------- 598

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
                                D ++++ F  L      Q  KEN                
Sbjct: 599 ---------------------DRRVVEAFSVL------QFMKEN---------------- 615

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               ++P+V+T++ ++ A  R   F+   ++ EE+
Sbjct: 616 ---DLRPDVITYTTLMKALIRIEQFDKVPVIYEEM 647



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 190/385 (49%), Gaps = 4/385 (1%)

Query: 160 TFLLRELGNRGEWSKAIQCF-AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           T L+  LG  G  ++A   F  F +  E +   +    +A++    ++G +  A+ + + 
Sbjct: 274 TALISALGGAGRVAEAEALFLEFFLAGEIKPRTRAY--NALLKGYVKIGSLKNAEQVLDE 331

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + G       +S L+ AY R+G  + A  +   M+   +KP+   ++ ++      G 
Sbjct: 332 MSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRG- 390

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           D++    +  +M  +GVQPDR  +N ++    +      A + FN M   GI+ D+ T+N
Sbjct: 391 DWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWN 450

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+DA  KG + D A E+  EM   N  P   TY+ MI+   +  R      M SEMK  
Sbjct: 451 TLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQ 510

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  + ++Y T++ +Y + GRF+EA+   + M++ G++     Y+AL+  Y ++G  D  
Sbjct: 511 GLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHA 570

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + + M+AD +  + +  ++L++ + +     EA  + +  K+  L+ DV+ Y+ L+ A
Sbjct: 571 LNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKA 630

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPN 543
           L +    +    + +EM   G  P+
Sbjct: 631 LIRIEQFDKVPVIYEEMITSGCAPD 655



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 164/323 (50%), Gaps = 5/323 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++    R G+ + A+ + +    +G   + Y FS +++ +   G  Q+A +V   M  
Sbjct: 345 SLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHA 404

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P+   YN +ID  GK      H ++ F+ M   G++PD +T+N+L+    +GG  +
Sbjct: 405 SGVQPDRHFYNVMIDTFGKYNC-LGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHD 463

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF EM          TYN +++ + +  +      +++EM  + + PN++TY+T++
Sbjct: 464 RAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLV 523

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y ++GR  +A+     MK  G+      Y+ +++ YA+ G  + AL V K M + G+ 
Sbjct: 524 DVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLE 583

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              V  N+L+  +G+  +  E   + + MK + + P+++TY+TL+    +   + +   I
Sbjct: 584 ASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVI 643

Query: 497 FREFKQAGL----KADVVLYSAL 515
           + E   +G     KA  +L SAL
Sbjct: 644 YEEMITSGCAPDRKARAMLRSAL 666



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/422 (21%), Positives = 180/422 (42%), Gaps = 69/422 (16%)

Query: 254 MKRYNLKPNLVTYNAVIDAC--GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
           ++ +   P+L +Y+ ++ +    +   D   +  +  D+  + ++PD   F+ L++  +R
Sbjct: 188 IREHGFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRESRLEPDAPLFSDLISAFAR 247

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-PAKNISPNVV 370
             L +AA +L       G+         L+ A+    ++  A  +  E   A  I P   
Sbjct: 248 AALPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRTR 307

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
            Y+ ++ GY K G L +A  +  EM   G+  D  +Y+ ++  Y + GR+E A ++ KEM
Sbjct: 308 AYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEM 367

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           E+ G++  +  ++ +L G+  +G + +   +  +M A  V P+   Y+ +ID + K    
Sbjct: 368 EADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCL 427

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             AM  F   ++ G++ DVV ++ LIDA  K G  + A+ L +EM +    P   TYN +
Sbjct: 428 GHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIM 487

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
           I+                  LG+Q+    ++ M S+                        
Sbjct: 488 INL-----------------LGEQERWVGVETMLSE------------------------ 506

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                                    M +  + PN++T++ +++   R   F++A   +E 
Sbjct: 507 -------------------------MKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEV 541

Query: 671 LR 672
           ++
Sbjct: 542 MK 543



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 99/461 (21%), Positives = 180/461 (39%), Gaps = 118/461 (25%)

Query: 367 PNVVTY--------------------------------------STMIDGYAKAGRLDDA 388
           P++ +Y                                      S +I  +A+A   D A
Sbjct: 195 PDLASYSHLLASLLNTRDPPDAAILERLLGDLRESRLEPDAPLFSDLISAFARAALPDAA 254

Query: 389 LNMFSEMKFLGI---------------GLDRV---------------------SYNTVLS 412
           L++ +  + +G+               G  RV                     +YN +L 
Sbjct: 255 LDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNALLK 314

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
            Y K+G  + A  V  EM   G+  D  TY+ L+  Y + G+++  R + ++M+AD V P
Sbjct: 315 GYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKP 374

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           +   +S ++  +   G +++A  + RE   +G++ D   Y+ +ID   K   +  A+   
Sbjct: 375 SSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAF 434

Query: 533 DEMTKEGIRPNVVTYNSIIDA-------------FGRSATTEC-----TVDDVERDLGKQ 574
           + M +EGI P+VVT+N++IDA             F     + C     T + +   LG+Q
Sbjct: 435 NRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQ 494

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQI-----IKVFGQLVAEKAGQGKKENRCRQEILCI 629
           +    ++ M S+    ++E G   N I     + V+G           +  R ++ I CI
Sbjct: 495 ERWVGVETMLSE----MKEQGLVPNIITYTTLVDVYG-----------RSGRFKEAIECI 539

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY 689
               + M    +KP+   + A++NA ++    + A  +++ +R    +   V    LM  
Sbjct: 540 ----EVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNA 595

Query: 690 --RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
              D   V+A S+   +K  D       Y  L   L    Q
Sbjct: 596 FGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQ 636



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 3/141 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+   G  G + +AI+C    V + +       +  A+++   + G  D A N+ + 
Sbjct: 519 YTTLVDVYGRSGRFKEAIEC--IEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKA 576

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G   +    ++L++A+G      EA SV   MK  +L+P+++TY  ++ A  +   
Sbjct: 577 MRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIE- 635

Query: 279 DFKHVVEIFDDMLRNGVQPDR 299
            F  V  I+++M+ +G  PDR
Sbjct: 636 QFDKVPVIYEEMITSGCAPDR 656


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 212/394 (53%), Gaps = 5/394 (1%)

Query: 162  LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
            +LR L   G  SK+I  F   +      N    +   +I +  + G +D A   FE    
Sbjct: 885  ILRHLCQMGIGSKSI--FGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGL 942

Query: 222  EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDF 280
             G+  +VY  + ++++  +    +   S+F  M    + PN+ T+N +I+  C +G  + 
Sbjct: 943  VGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEG--NL 1000

Query: 281  KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
            K    +   M  NG  P  +T+N+LL    + G ++AA  L + M+ +GI+ D+ TYN  
Sbjct: 1001 KKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVF 1060

Query: 341  LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
            +D +C   +   A+ ++ +M  + ISPN VTY+T+I+G+ K G++  A  +F+EM    +
Sbjct: 1061 IDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDL 1120

Query: 401  GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
              + V+YN ++  +  +G FEEAL +   ME++G+R + VTY  LL G  K  K++  +R
Sbjct: 1121 SPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKR 1180

Query: 461  MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
            + E+M+ + +    + Y+ LID   K G+  EA+Q+     + G+  DV+ YS+LI+  C
Sbjct: 1181 LLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC 1240

Query: 521  KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            + G ++SA  ++  M + G+  N + Y+++I  F
Sbjct: 1241 RVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNF 1274



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 230/496 (46%), Gaps = 38/496 (7%)

Query: 178  CFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGY--GNTV-YAFSAL 234
            C    +  + R  D  K      SIL  L ++ +       AL + Y   N++   F  L
Sbjct: 867  CLTAHILVKARMYDSAK------SILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLL 920

Query: 235  ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG 294
            I  Y + G    A+  F  +     KP++ T N ++ +  K     + V  +F +M   G
Sbjct: 921  IRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRT-ELVWSLFREMSDKG 979

Query: 295  VQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
            + P+  TFN L+  +C  G L +A  NL  +M   G    I TYNTLL+  CK  +   A
Sbjct: 980  ICPNVGTFNILINGLCVEGNLKKAG-NLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA 1038

Query: 354  FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             E++  M  K I  +V TY+  ID      R   A  +  +M+   I  + V+YNT+++ 
Sbjct: 1039 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 1098

Query: 414  YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
            + K G+   A  V  EM    +  + VTYNAL+GG+   G ++E  R+ + M+A  +  N
Sbjct: 1099 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 1158

Query: 474  LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
             +TY TL++   K   ++ A ++    +   +    + Y+ LID LCKNG+++ AV L+ 
Sbjct: 1159 EVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVG 1218

Query: 534  EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER------DLGKQKESANLDAMCSQD 587
             M K+G+ P+V+TY+S+I+ F R    +   + + R       L K   S  +   C   
Sbjct: 1219 NMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHG 1278

Query: 588  DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI--LC---ILGVFQK----MHK 638
              +V EA       +KV+   V    G G     C   +  LC    LG  +K    M +
Sbjct: 1279 --NVTEA-------MKVYA--VMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSR 1327

Query: 639  LKIKPNVVTFSAILNA 654
            + + PN +T+  I+N 
Sbjct: 1328 IGLVPNSITYDCIING 1343



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 221/460 (48%), Gaps = 18/460 (3%)

Query: 100  RSTRFVSKMHFGRPKIAMSTRHSVVAEEA----LHHVTAFARDDVSLGDILKKFEFKLCG 155
             + +F++++H+    +     ++++AE      LH   A   D +   ++L         
Sbjct: 1387 EAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALF-DKMVQNNVL--------- 1436

Query: 156  ADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK 213
             D YT+  LL  L  +G+   A+  F  A+ R     +   + + ++  L + G    A 
Sbjct: 1437 PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNH-VMYTCLVDGLSKAGHPKAAF 1495

Query: 214  NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
              FE  + +G      AF+A+I +  R G   +A   F++M+ + + PNL TYN ++   
Sbjct: 1496 YFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGF 1555

Query: 274  GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
             K     +++  ++  M+R G+ PD++TF+SL+   S+ G+ +    L  +M+  G   D
Sbjct: 1556 SKKQALLRYL-SLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLAD 1614

Query: 334  IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             FT+N L++   +  +M  AF+++  M    + P+  TY+ + +G  K     ++  +  
Sbjct: 1615 QFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLH 1674

Query: 394  EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            EM   G+      Y T+++   ++G  + A  +  EME+ G     V  +A++ G    G
Sbjct: 1675 EMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCG 1734

Query: 454  KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
            K ++   + + M    + P + T++TL+  + +     EA+++    +  GLK DVV Y+
Sbjct: 1735 KTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYN 1794

Query: 514  ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             LI  +C NG   +A  L +EM    + PN+ TY  ++DA
Sbjct: 1795 VLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDA 1834



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 199/464 (42%), Gaps = 68/464 (14%)

Query: 230  AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
             ++ LI+ + + G    A  VFN M +++L PN VTYNA+I   C  G  DF+  + + D
Sbjct: 1091 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVG--DFEEALRLLD 1148

Query: 289  DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
             M   G++ + +T+ +LL    +   +E A+ L   M    +      Y  L+D +CK  
Sbjct: 1149 HMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNG 1208

Query: 349  QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
             +D A +++  M    ++P+V+TYS++I+G+ + G +  A  +   M   G+ L+++ Y+
Sbjct: 1209 MLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYS 1268

Query: 409  TVLSIYAKLGRFEEALLV-----------------------CKE------------MESS 433
            T++  + + G   EA+ V                       C++            M   
Sbjct: 1269 TLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRI 1328

Query: 434  GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            G+  +++TY+ ++ GYG  G        F+ M      P+  TY +L+    KGG   EA
Sbjct: 1329 GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEA 1388

Query: 494  MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             +            D V+Y+ L+   CK+G +  AV+L D+M +  + P+  TY+S++  
Sbjct: 1389 KKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTG 1448

Query: 554  FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
              R       V      +G+     N           V      D             KA
Sbjct: 1449 LCRKGKAVTAVCLFGTAMGRGTLFPN----------HVMYTCLVDG----------LSKA 1488

Query: 614  GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
            G  K               F++M K    P+ V F+AI+++CSR
Sbjct: 1489 GHPKAA----------FYFFEEMMKKGTCPDTVAFNAIIDSCSR 1522



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 111/467 (23%), Positives = 207/467 (44%), Gaps = 33/467 (7%)

Query: 207  GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRYNLKPNLVT 265
            G +  A  +F+  +        Y +S+L++   R G    A+ +F  +M R  L PN V 
Sbjct: 1418 GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 1477

Query: 266  YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
            Y  ++D   K G   K     F++M++ G  PD + FN+++  CSR G    A + F+ M
Sbjct: 1478 YTCLVDGLSKAGHP-KAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 1536

Query: 326  VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
               G+  ++ TYN LL    K   +     + + M  + I P+ +T+ ++I G +K+G  
Sbjct: 1537 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 1596

Query: 386  DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            D  + +  +M   G   D+ ++N +++ Y++ G+  +A  +   M + G+  D  TYN +
Sbjct: 1597 DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHI 1656

Query: 446  LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
              G  K+  + E   +  +M  + V P    Y TLI+   + G  + A ++  E +  G 
Sbjct: 1657 FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 1716

Query: 506  KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
             +  V  SA++  L   G  E A+ +LD M +  + P + T+ +++  F R A       
Sbjct: 1717 GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDA------- 1769

Query: 566  DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
                   K  E+  L        K V E       ++  +  L+      G         
Sbjct: 1770 -------KIAEALKL--------KGVMELCGLKLDVV-AYNVLIMGMCANGDSAAA---- 1809

Query: 626  ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                  ++++M    + PN+ T++ +++A S  N+      LL +L+
Sbjct: 1810 ----FELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQ 1852



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 168/349 (48%), Gaps = 1/349 (0%)

Query: 207  GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
            G +  A N+ +     G+  T+  ++ L++ Y + G  + AI + + M    ++ ++ TY
Sbjct: 998  GNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTY 1057

Query: 267  NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
            N  ID         K  + +   M +  + P+ +T+N+L+    + G    A  +FNEM 
Sbjct: 1058 NVFIDNLCTNHRSAKAYL-LLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMS 1116

Query: 327  HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
               +  +  TYN L+   C     + A  ++  M A  +  N VTY T+++G  K  + +
Sbjct: 1117 KFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFE 1176

Query: 387  DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
             A  +   M+   + +  ++Y  ++    K G  +EA+ +   M   G+  D +TY++L+
Sbjct: 1177 LAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLI 1236

Query: 447  GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
             G+ + G     + +  +M    +  N + YSTLI  + + G   EAM+++      G  
Sbjct: 1237 NGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHG 1296

Query: 507  ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            AD    + L+ +LC++G +  A   L  M++ G+ PN +TY+ II+ +G
Sbjct: 1297 ADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYG 1345



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 171/364 (46%), Gaps = 31/364 (8%)

Query: 301  TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
             F+ L+ V  + G+ + A   F  +   G    ++T N +L ++ K  + +L + +  EM
Sbjct: 916  VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 975

Query: 361  PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
              K I PNV T++ +I+G    G L  A N+  +M+  G     V+YNT+L+ Y K GR+
Sbjct: 976  SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 1035

Query: 421  EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
            + A+ +   M   GI  D  TYN  +       +  +   + ++M+ + +SPN +TY+TL
Sbjct: 1036 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 1095

Query: 481  IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
            I+ + K G    A Q+F E  +  L  + V Y+ALI   C  G  E A+ LLD M   G+
Sbjct: 1096 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 1155

Query: 541  RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
            R N VTY ++++   +    E                           K + E  R ++ 
Sbjct: 1156 RLNEVTYGTLLNGLCKHEKFELA-------------------------KRLLERMRVNDM 1190

Query: 601  IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
            ++   G +       G  +N    E + ++G    M+K  + P+V+T+S+++N   R  +
Sbjct: 1191 VV---GHIAYTVLIDGLCKNGMLDEAVQLVG---NMYKDGVNPDVITYSSLINGFCRVGN 1244

Query: 661  FEDA 664
             + A
Sbjct: 1245 IKSA 1248



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 140/605 (23%), Positives = 254/605 (41%), Gaps = 111/605 (18%)

Query: 208  KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
            K +LAK + E            A++ LI    ++G   EA+ +  +M +  + P+++TY+
Sbjct: 1174 KFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYS 1233

Query: 268  AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMV 326
            ++I+   + G + K   EI   M R+G+  ++I +++L+   C  G + EA + ++  M 
Sbjct: 1234 SLINGFCRVG-NIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMK-VYAVMN 1291

Query: 327  HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
              G   D FT N L+ ++C+  ++  A + +  M    + PN +TY  +I+GY   G   
Sbjct: 1292 CNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPL 1351

Query: 387  DALNMFSEM-----------------------------KFLGI------GLDRVSYNTVL 411
            +A + F +M                             KFL         +D V YNT+L
Sbjct: 1352 NAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLL 1411

Query: 412  SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF-EQMKADCV 470
            +   K G   EA+ +  +M  + +  D+ TY++LL G  ++GK      +F   M    +
Sbjct: 1412 AETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTL 1471

Query: 471  SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA-- 528
             PN + Y+ L+D  SK G  K A   F E  + G   D V ++A+ID+  + G +  A  
Sbjct: 1472 FPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKAND 1531

Query: 529  ---------------------------------VSLLDEMTKEGIRPNVVTYNSIIDAFG 555
                                             +SL   M +EGI P+ +T++S+I    
Sbjct: 1532 FFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLS 1591

Query: 556  RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
            +S   +  V    + LGK                 + E    D      F  L+ + +  
Sbjct: 1592 KSGIPDLGV----KLLGKM----------------IMEGTLADQ---FTFNILINKYSES 1628

Query: 616  GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 675
            GK              +   M+ L + P+  T++ I N  ++ ++F +++++L E  + +
Sbjct: 1629 GKMRKA--------FDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHE--MLE 1678

Query: 676  NQV---YGVAHGLLMGYRDNIWVQ-ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRG 731
            N V   +     L+ G      +Q A  L DE++ +   +     +A+   L H G+   
Sbjct: 1679 NGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTED 1738

Query: 732  AQLVV 736
            A LV+
Sbjct: 1739 AMLVL 1743



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/457 (22%), Positives = 179/457 (39%), Gaps = 109/457 (23%)

Query: 207  GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
            GK+ +A  +F              ++ALI  +   G  +EA+ + + M+   L+ N VTY
Sbjct: 1103 GKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTY 1162

Query: 267  NAVIDA------------------------------------CGKGGVDFKHVVEIFDDM 290
              +++                                     C  G +D    V++  +M
Sbjct: 1163 GTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLD--EAVQLVGNM 1220

Query: 291  LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI-------------------- 330
             ++GV PD IT++SL+    R G  ++A+ +   M   G+                    
Sbjct: 1221 YKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNV 1280

Query: 331  ---------------DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
                             D FT N L+ ++C+  ++  A + +  M    + PN +TY  +
Sbjct: 1281 TEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCI 1340

Query: 376  IDGYAKAGRLDDALNMFSEM-----------------------------KFLGI------ 400
            I+GY   G   +A + F +M                             KFL        
Sbjct: 1341 INGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPG 1400

Query: 401  GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             +D V YNT+L+   K G   EA+ +  +M  + +  D+ TY++LL G  ++GK      
Sbjct: 1401 AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVC 1460

Query: 461  MF-EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +F   M    + PN + Y+ L+D  SK G  K A   F E  + G   D V ++A+ID+ 
Sbjct: 1461 LFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSC 1520

Query: 520  CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             + G +  A      M   G+ PN+ TYN ++  F +
Sbjct: 1521 SRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 1557



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 141/336 (41%), Gaps = 42/336 (12%)

Query: 407  YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
            ++ ++ +Y K G  + A+   + +   G +    T N +L    K  + + V  +F +M 
Sbjct: 917  FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 976

Query: 467  ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
               + PN+ T++ LI+     G  K+A  + ++ ++ G    +V Y+ L++  CK G  +
Sbjct: 977  DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 1036

Query: 527  SAVSLLDEMTKEGIRPNVVTYNSIIDAFG---RSATTECTVDDVERDLGKQKESANLDAM 583
            +A+ L+D M  +GI  +V TYN  ID      RSA     +  + +++    E       
Sbjct: 1037 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV------ 1090

Query: 584  CSQDDKDVQEAGRTDNQIIKVFGQLVAE-KAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
                         T N +I  F   V E K G   +             VF +M K  + 
Sbjct: 1091 -------------TYNTLINGF---VKEGKIGVAAQ-------------VFNEMSKFDLS 1121

Query: 643  PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSL 700
            PN VT++A++        FE+A  LL+ +     ++  V +G L+    +   +  A  L
Sbjct: 1122 PNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRL 1181

Query: 701  FDEVKLMDSSTASAFYNALTDMLWHFGQ-KRGAQLV 735
             + +++ D       Y  L D L   G      QLV
Sbjct: 1182 LERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLV 1217


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 212/416 (50%), Gaps = 5/416 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           ++ LL  L ++ +   A++ F   VK     +      S +I+ L ++G   +A  + + 
Sbjct: 50  FSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDV--ITYSTIINGLCKMGSTTMAIQLLKK 107

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
              +G    V  +S +I +  +     EA+   + M    + PN+VTY++++   C  G 
Sbjct: 108 MEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGR 167

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            +      +F  M+   V PD +TFN L+   S+ G+   A+ +F  M+ +G++ ++ TY
Sbjct: 168 SN--EATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTY 225

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L+D  C  +QMD A ++   M  K  +P+V +Y+ +I G+ K+GR+D+A  + +EM  
Sbjct: 226 NALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSH 285

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             +  D V+Y+T++  + + GR ++A  + +EM S G+  D +TY+ +L G  KQG  DE
Sbjct: 286 KALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDE 345

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              + + M+   + PN+  Y+ LI      G  + A ++F      G++ DVV Y+ +I 
Sbjct: 346 AFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMIS 405

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            L K GL   A  L  +M   G  PN  TYN II  F R+  T      +E  +G+
Sbjct: 406 GLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGR 461



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 181/333 (54%), Gaps = 3/333 (0%)

Query: 228 VYAFSALISAYGRSGY--CQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
           VY  + LI+ +  S +     A SV  +M +  L+PN VT++ +++            V+
Sbjct: 10  VYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKA-KIIDAVK 68

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +FD+M++ G +PD IT+++++    + G    A  L  +M  +G   ++  Y+T++D++C
Sbjct: 69  LFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLC 128

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K   +  A E ++EM  + ISPNVVTYS+++ G+   GR ++A ++F +M    +  D V
Sbjct: 129 KDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTV 188

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           ++N ++   +K G   EA  V + M   G+  +  TYNAL+ GY  Q + DE +++F  M
Sbjct: 189 TFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIM 248

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
                +P++ +Y+ LI  + K G   EA  +  E     L  D V YS L+   C++G  
Sbjct: 249 VRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRP 308

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           + A  LL+EM   G+ P+++TY+ ++D   +  
Sbjct: 309 QDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQG 341



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 214/418 (51%), Gaps = 29/418 (6%)

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSR 311
           M   N++P++ T   +I+  C      F     +  +M + G+QP+ +TF++LL  + S+
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
             + +A + LF+EMV  G + D+ TY+T+++ +CK     +A +++ +M  K   PNVV 
Sbjct: 61  AKIIDAVK-LFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVV 119

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           YST+ID   K   + +A+   SEM   GI  + V+Y+++L  +  LGR  EA  + K+M 
Sbjct: 120 YSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMV 179

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
              +  D VT+N L+ G  K+G   E + +FE M    V PN+ TY+ L+D Y       
Sbjct: 180 ERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMD 239

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA ++F    + G    V  Y+ LI   CK+G ++ A  LL EM+ + + P+ VTY++++
Sbjct: 240 EAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLM 299

Query: 552 DAF---GRSATTECTVDDVERDLGKQKE----SANLDAMCSQDDKD--------VQEAGR 596
             F   GR    +  ++++ R  G   +    S  LD +C Q   D        +QE+  
Sbjct: 300 KGFCQDGRPQDAQKLLEEM-RSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKI 358

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
             N  I ++  L+      GK E   R+       +F  +    I+P+VVT++ +++ 
Sbjct: 359 EPN--IFIYTILIQGMCNFGKLE-AARE-------LFSNLFVKGIQPDVVTYTVMISG 406



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 186/415 (44%), Gaps = 42/415 (10%)

Query: 145 ILKKFEFKLCGADD--YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +LKK E K C  +   Y+ ++  L      ++A++  +  V R    N      S+++  
Sbjct: 104 LLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVV--TYSSILHG 161

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
              LG+ + A ++F+  +          F+ L+    + G   EA  VF +M    ++PN
Sbjct: 162 FCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPN 221

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           + TYNA++D  C +  +D     ++F+ M+R G  P   ++N L+    + G  + A+ L
Sbjct: 222 VNTYNALMDGYCSQSQMD--EAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGL 279

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             EM H+ +  D  TY+TL+   C+  +   A +++ EM +  + P+++TYS ++DG  K
Sbjct: 280 LAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCK 339

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G LD+A  +                                    K M+ S I  +   
Sbjct: 340 QGHLDEAFELL-----------------------------------KAMQESKIEPNIFI 364

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  L+ G    GK +  R +F  +    + P+++TY+ +I    KGGL  EA ++FR+  
Sbjct: 365 YTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMA 424

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             G   +   Y+ +I    +NG   +A  L++EM   G   +  T+  + D   R
Sbjct: 425 VHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESR 479


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 155/587 (26%), Positives = 273/587 (46%), Gaps = 51/587 (8%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           +LR L   G  SK+I  F   +      N    +   +I +  + G +D A   FE    
Sbjct: 134 ILRHLCQMGIGSKSI--FGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGL 191

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDF 280
            G+  +VY  + ++++  +    +   S+F  M    + PN+ T+N +I+  C +G  + 
Sbjct: 192 VGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEG--NL 249

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           K    +   M  NG  P  +T+N+LL    + G ++AA  L + M+ +GI+ D+ TYN  
Sbjct: 250 KKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVF 309

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +D +C   +   A+ ++ +M  + ISPN VTY+T+I+G+ K G++  A  +F+EM    +
Sbjct: 310 IDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDL 369

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             + V+YN ++  +  +G FEEAL +   ME++G+R + VTY  LL G  K  K++  +R
Sbjct: 370 SPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKR 429

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + E+M+ + +    + Y+ LID   K G+  EA+Q+     + G+  DV+ YS+LI+  C
Sbjct: 430 LLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC 489

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF-------------------GRSA--- 558
           + G ++SA  ++  M + G+  N + Y+++I  F                   G  A   
Sbjct: 490 RVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHF 549

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
           T    V  + RD GK  E+     +C      +     T + II  +G +          
Sbjct: 550 TCNVLVSSLCRD-GKLGEAEKF--LCHMSRIGLVPNSITYDCIINGYGSI---------- 596

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
                 + L     F  M K    P+  T+ ++L    +  +  +A   L  L      V
Sbjct: 597 -----GDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAV 651

Query: 679 YGVAHGLLMG--YRDNIWVQALSLFDEV----KLMDSSTASAFYNAL 719
             V +  L+    +     +A++LFD++     L DS T S+    L
Sbjct: 652 DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGL 698



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 155/571 (27%), Positives = 252/571 (44%), Gaps = 52/571 (9%)

Query: 176 IQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGY--GNTV-YAFS 232
           + C    +  + R  D  K      SIL  L ++ +       AL + Y   N++   F 
Sbjct: 114 MYCLTAHILVKARMYDSAK------SILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFD 167

Query: 233 ALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLR 292
            LI  Y + G    A+  F  +     KP++ T N ++ +  K     + V  +F +M  
Sbjct: 168 LLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRT-ELVWSLFREMSD 226

Query: 293 NGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
            G+ P+  TFN L+  +C  G L +A  NL  +M   G    I TYNTLL+  CK  +  
Sbjct: 227 KGICPNVGTFNILINGLCVEGNLKKAG-NLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A E++  M  K I  +V TY+  ID      R   A  +  +M+   I  + V+YNT++
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 345

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           + + K G+   A  V  EM    +  + VTYNAL+GG+   G ++E  R+ + M+A  + 
Sbjct: 346 NGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLR 405

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
            N +TY TL++   K   ++ A ++    +   +    + Y+ LID LCKNG+++ AV L
Sbjct: 406 LNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQL 465

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER------DLGKQKESANLDAMCS 585
           +  M K+G+ P+V+TY+S+I+ F R    +   + + R       L K   S  +   C 
Sbjct: 466 VGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQ 525

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI--LC---ILGVFQK----M 636
               +V EA       +KV+   V    G G     C   +  LC    LG  +K    M
Sbjct: 526 HG--NVTEA-------MKVYA--VMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 574

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY------- 689
            ++ + PN +T+  I+N      S  D    L     FD+ +    H     Y       
Sbjct: 575 SRIGLVPNSITYDCIINGYG---SIGDP---LNAFSFFDDMIKCGQHPSFFTYGSLLKGL 628

Query: 690 -RDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
            +    V+A    + +  +  +  S  YN L
Sbjct: 629 CKGGNLVEAKKFLNRLHYIPGAVDSVMYNTL 659



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 221/459 (48%), Gaps = 18/459 (3%)

Query: 101  STRFVSKMHFGRPKIAMSTRHSVVAEEA----LHHVTAFARDDVSLGDILKKFEFKLCGA 156
            + +F++++H+    +     ++++AE      LH   A   D +   ++L          
Sbjct: 637  AKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALF-DKMVQNNVL---------P 686

Query: 157  DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
            D YT+  LL  L  +G+   A+  F  A+ R     +   + + ++  L + G    A  
Sbjct: 687  DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNH-VMYTCLVDGLSKAGHPKAAFY 745

Query: 215  IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
             FE  + +G      AF+A+I +  R G   +A   F++M+ + + PNL TYN ++    
Sbjct: 746  FFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFS 805

Query: 275  KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
            K     +++  ++  M+R G+ PD++TF+SL+   S+ G+ +    L  +M+  G   D 
Sbjct: 806  KKQALLRYL-SLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQ 864

Query: 335  FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            FT+N L++   +  +M  AF+++  M    + P+  TY+ + +G  K     ++  +  E
Sbjct: 865  FTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHE 924

Query: 395  MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
            M   G+      Y T+++   ++G  + A  +  EME+ G     V  +A++ G    GK
Sbjct: 925  MLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGK 984

Query: 455  YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
             ++   + + M    + P + T++TL+  + +     EA+++    +  GLK DVV Y+ 
Sbjct: 985  TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNV 1044

Query: 515  LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            LI  +C NG   +A  L +EM    + PN+ TY  ++DA
Sbjct: 1045 LIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDA 1083



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 203/479 (42%), Gaps = 68/479 (14%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
            ++ LI+ + + G    A  VFN M +++L PN VTYNA+I   C  G  DF+  + + D
Sbjct: 340 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVG--DFEEALRLLD 397

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M   G++ + +T+ +LL    +   +E A+ L   M    +      Y  L+D +CK  
Sbjct: 398 HMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNG 457

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            +D A +++  M    ++P+V+TYS++I+G+ + G +  A  +   M   G+ L+++ Y+
Sbjct: 458 MLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYS 517

Query: 409 TVLSIYAKLGRFEEALLV-----------------------CKE------------MESS 433
           T++  + + G   EA+ V                       C++            M   
Sbjct: 518 TLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRI 577

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G+  +++TY+ ++ GYG  G        F+ M      P+  TY +L+    KGG   EA
Sbjct: 578 GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEA 637

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            +            D V+Y+ L+   CK+G +  AV+L D+M +  + P+  TY+S++  
Sbjct: 638 KKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTG 697

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
             R       V      +G+     N           V      D             KA
Sbjct: 698 LCRKGKAVTAVCLFGTAMGRGTLFPN----------HVMYTCLVDG----------LSKA 737

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           G  K               F++M K    P+ V F+AI+++CSR      A+     +R
Sbjct: 738 GHPKAA----------FYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR 786



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 200/445 (44%), Gaps = 33/445 (7%)

Query: 229  YAFSALISAYGRSGYCQEAISVFNS-MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
            Y +S+L++   R G    A+ +F + M R  L PN V Y  ++D   K G   K     F
Sbjct: 689  YTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHP-KAAFYFF 747

Query: 288  DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            ++M++ G  PD + FN+++  CSR G    A + F+ M   G+  ++ TYN LL    K 
Sbjct: 748  EEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKK 807

Query: 348  AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
              +     + + M  + I P+ +T+ ++I G +K+G  D  + +  +M   G   D+ ++
Sbjct: 808  QALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTF 867

Query: 408  NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
            N +++ Y++ G+  +A  +   M + G+  D  TYN +  G  K+  + E   +  +M  
Sbjct: 868  NILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLE 927

Query: 468  DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
            + V P    Y TLI+   + G  + A ++  E +  G  +  V  SA++  L   G  E 
Sbjct: 928  NGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTED 987

Query: 528  AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
            A+ +LD M +  + P + T+ +++  F R A              K  E+  L       
Sbjct: 988  AMLVLDHMLRMRLLPTIATFTTLMHRFCRDA--------------KIAEALKL------- 1026

Query: 588  DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
             K V E       ++  +  L+      G               ++++M    + PN+ T
Sbjct: 1027 -KGVMELCGLKLDVV-AYNVLIMGMCANGDSA--------AAFELYEEMRHRDLCPNITT 1076

Query: 648  FSAILNACSRCNSFEDASMLLEELR 672
            ++ +++A S  N+      LL +L+
Sbjct: 1077 YAVLVDAISAANNLIQGEKLLTDLQ 1101



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 139/608 (22%), Positives = 253/608 (41%), Gaps = 117/608 (19%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K +LAK + E            A++ LI    ++G   EA+ +  +M +  + P+++TY+
Sbjct: 423 KFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYS 482

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMV 326
           ++I+   + G + K   EI   M R+G+  ++I +++L+   C  G + EA + ++  M 
Sbjct: 483 SLINGFCRVG-NIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMK-VYAVMN 540

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G   D FT N L+ ++C+  ++  A + +  M    + PN +TY  +I+GY   G   
Sbjct: 541 CNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPL 600

Query: 387 DALNMFSEM-----------------------------KFLGI------GLDRVSYNTVL 411
           +A + F +M                             KFL         +D V YNT+L
Sbjct: 601 NAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLL 660

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF-EQMKADCV 470
           +   K G   EA+ +  +M  + +  D+ TY++LL G  ++GK      +F   M    +
Sbjct: 661 AETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTL 720

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA-- 528
            PN + Y+ L+D  SK G  K A   F E  + G   D V ++A+ID+  + G +  A  
Sbjct: 721 FPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKAND 780

Query: 529 ---------------------------------VSLLDEMTKEGIRPNVVTYNSIIDAFG 555
                                            +SL   M +EGI P+ +T++S+I    
Sbjct: 781 FFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLS 840

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
           +S   +  V    + LGK                 + E    D      F  L+ + +  
Sbjct: 841 KSGIPDLGV----KLLGKM----------------IMEGTLADQF---TFNILINKYSES 877

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 675
           GK              +   M+ L + P+  T++ I N  ++ ++F +++++L E  + +
Sbjct: 878 GKMRKA--------FDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHE--MLE 927

Query: 676 N-------QVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           N       Q   + +G+    R      A  L DE++ +   +     +A+   L H G+
Sbjct: 928 NGVIPKHAQYITLINGMC---RVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGK 984

Query: 729 KRGAQLVV 736
              A LV+
Sbjct: 985 TEDAMLVL 992



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/457 (22%), Positives = 179/457 (39%), Gaps = 109/457 (23%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+ +A  +F              ++ALI  +   G  +EA+ + + M+   L+ N VTY
Sbjct: 352 GKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTY 411

Query: 267 NAVIDA------------------------------------CGKGGVDFKHVVEIFDDM 290
             +++                                     C  G +D    V++  +M
Sbjct: 412 GTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLD--EAVQLVGNM 469

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI-------------------- 330
            ++GV PD IT++SL+    R G  ++A+ +   M   G+                    
Sbjct: 470 YKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNV 529

Query: 331 ---------------DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
                            D FT N L+ ++C+  ++  A + +  M    + PN +TY  +
Sbjct: 530 TEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCI 589

Query: 376 IDGYAKAGRLDDALNMFSEM-----------------------------KFLGI------ 400
           I+GY   G   +A + F +M                             KFL        
Sbjct: 590 INGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPG 649

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
            +D V YNT+L+   K G   EA+ +  +M  + +  D+ TY++LL G  ++GK      
Sbjct: 650 AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVC 709

Query: 461 MF-EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           +F   M    + PN + Y+ L+D  SK G  K A   F E  + G   D V ++A+ID+ 
Sbjct: 710 LFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSC 769

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            + G +  A      M   G+ PN+ TYN ++  F +
Sbjct: 770 SRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 806



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 140/335 (41%), Gaps = 40/335 (11%)

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           ++ ++ +Y K G  + A+   + +   G +    T N +L    K  + + V  +F +M 
Sbjct: 166 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 225

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + PN+ T++ LI+     G  K+A  + ++ ++ G    +V Y+ L++  CK G  +
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFG---RSATTECTVDDVERDLGKQKESANLDAM 583
           +A+ L+D M  +GI  +V TYN  ID      RSA     +  + +++    E       
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV------ 339

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
                        T N +I  F         +GK        I     VF +M K  + P
Sbjct: 340 -------------TYNTLINGF-------VKEGK--------IGVAAQVFNEMSKFDLSP 371

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLF 701
           N VT++A++        FE+A  LL+ +     ++  V +G L+    +   +  A  L 
Sbjct: 372 NCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLL 431

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQ-KRGAQLV 735
           + +++ D       Y  L D L   G      QLV
Sbjct: 432 ERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLV 466


>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
 gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
          Length = 1429

 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 154/549 (28%), Positives = 267/549 (48%), Gaps = 37/549 (6%)

Query: 36  HPSSRPHWTSHKVSLTKPPLSP-SPRNAPKPAATSTTVAPNPKPFHSLSPLPSSKSELAP 94
           H S R  + S   + ++P  SP SP + P  A    ++          S    +K E A 
Sbjct: 51  HLSLRETYDSRASTPSQPLSSPVSPTDTPDSAEFVDSIGS--------SEHQKTKDETA- 101

Query: 95  DFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSL------GDILKK 148
             + RR  R V KM+    K+A+     + A++    V       +SL       DIL  
Sbjct: 102 -VASRR--RRVKKMN----KVAL-----IKAKDWRERVKFLTDKILSLKPNQFVADILDA 149

Query: 149 FEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGK 208
              ++   D Y F+++ +G    W +A++ F +   R    +   ++ +A++ +LGR  +
Sbjct: 150 RPVQMTPTD-YCFVVKSVGQES-WQRALEVFEWLNLRHWH-SPNARMVAAILGVLGRWNQ 206

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
             LA  IF  A     G+ V  ++A++  Y RSG   +A  + ++M++    P+L+++N 
Sbjct: 207 ESLAVEIFTRA-EPTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNT 265

Query: 269 VIDACGK-GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           +I+A  K GG+    VVE+ D +  +G++PD IT+N+LL+ CSR    E A  +F +M  
Sbjct: 266 LINARLKSGGLTPNLVVELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEA 325

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
                D++TYN ++    +      A  +  E+  K  SP+ VTY++++  +A+    + 
Sbjct: 326 HRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEK 385

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES-SGIRKDAVTYNALL 446
              ++ +M+ +G G D ++YNT++ +Y K G+ + AL + K+M+  SG   DA+TY  L+
Sbjct: 386 VKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLI 445

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
              GK  +  E   +  +M    + P L TYS LI  Y+K G  +EA   F    ++G K
Sbjct: 446 DSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTK 505

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECT 563
            D + YS ++D L +      A  L  +M  +G  P+   Y  +I       RS   + T
Sbjct: 506 PDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELMILGLMKENRSDDVQKT 565

Query: 564 VDDVERDLG 572
           + D+E   G
Sbjct: 566 IRDMEELCG 574



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 155/684 (22%), Positives = 297/684 (43%), Gaps = 65/684 (9%)

Query: 195  LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYA-FSALISAYGRSGYCQEAISVFNS 253
            +  +M+ +  +LG  + A  +   A  +G+       ++ +I AYG+    Q+A SV  +
Sbjct: 718  VCKSMVVVYCKLGFPETAYQVVNQAETKGFHFACSPMYTDIIEAYGKLKLWQKAESVVGN 777

Query: 254  MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
            +++    P+L T+N+++ A  + G  ++    IF+ M+R+G  P   + N LL A+C  G
Sbjct: 778  LRQSGRTPDLKTWNSLMSAYAECGC-YERARAIFNTMMRDGPSPTVESINKLLHALCVDG 836

Query: 313  GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
             L E    +  E+   G      +   +LDA  +   +    +I + M A    P +  Y
Sbjct: 837  RL-EELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLY 895

Query: 373  STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
              MI+   K  R+ DA  M SEM+     ++   +N++L +Y  +  +++ + V + ++ 
Sbjct: 896  RMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKE 955

Query: 433  SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            SG+  D  TYN L+  Y +  + +E   + +QM+   + P L TY +LI  + K    ++
Sbjct: 956  SGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQ 1015

Query: 493  AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            A Q+F E    GLK D   Y  ++     +G    A  LL  M   GI P + T + ++ 
Sbjct: 1016 AEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMV 1075

Query: 553  AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
            ++  S   +    + E+ L   K +            +V+      + +I  + +    K
Sbjct: 1076 SYSSSGNPQ----EAEKVLSNLKNT------------EVELTTLPYSSVIDAYLRSKDYK 1119

Query: 613  AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            +G  +                 +M K  ++P+   ++  + A S      +  +LL+ L+
Sbjct: 1120 SGIER---------------LLEMKKEGLEPDHRIWTCFVRAASFSKEKSEVMLLLKALQ 1164

Query: 673  LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
               +  + +   LL G  + +  +    F+++K ++ + A  F NAL ++LW F  +  +
Sbjct: 1165 ---DIGFDIPIRLLGGRPELLVSEVDGCFEKLKSIEDNAALNFANALLNLLWAFELRATS 1221

Query: 733  QLVVLEGKRR--------QVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGH- 783
              V     +R        +V +  W     D   +S GAA                EG+ 
Sbjct: 1222 SWVFQLAIKRGIFSLDVFRVADKDWGA---DFRRLSGGAA-----------LDASLEGYP 1267

Query: 784  ELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWL 843
            E PK + ++TG  +++ V    +L + ++  L  MG+PF       G  ++    +  WL
Sbjct: 1268 ESPKSVVLITGTAEYNGV----SLDKTLKACLWEMGSPFLPCKTRTGLLVAKAHSLRMWL 1323

Query: 844  RESGTLKVLVLHDDRTHSENAGFD 867
            ++S     L L D  +  E+   D
Sbjct: 1324 KDSPFCFDLELKDSVSLPESNSMD 1347



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 166/357 (46%), Gaps = 33/357 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S   R   ++ A  +FE          ++ ++A+IS YGR G   EA  +F  ++ 
Sbjct: 301 NTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELEL 360

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+ VTYN+++ A  +   + + V E++  M + G   D +T+N+++ +  + G  +
Sbjct: 361 KGFSPDAVTYNSLLYAFARER-NTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLD 419

Query: 317 AARNLFNEMVH-RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            A  L+ +M    G + D  TY  L+D++ K  +   A  +M+EM    I P + TYS +
Sbjct: 420 LALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSAL 479

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I GYAKAG+ ++A + FS M   G   D ++Y+ +L +  +     +A ++ ++M S G 
Sbjct: 480 ICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGH 539

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC------VSPNLL-------------- 475
                 Y  ++ G  K+ + D+V++    M+  C      +S  L+              
Sbjct: 540 TPSHSLYELMILGLMKENRSDDVQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKV 599

Query: 476 -----------TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
                      T  +++  YS  G + EA ++    K+    +  ++  ALI   CK
Sbjct: 600 AITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLINEALIVLHCK 656



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 123/587 (20%), Positives = 250/587 (42%), Gaps = 85/587 (14%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++    R    +  K +++     G+G     ++ +I  YG+ G    A+ ++  MK 
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430

Query: 257 YNLK-PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            + + P+ +TY  +ID+ GK     +    +  +ML  G++P   T+++L+   ++ G  
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRSVEAAA-LMSEMLDVGIKPTLQTYSALICGYAKAGKR 489

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A + F+ M+  G   D   Y+ +LD + +G +   A+ +  +M +   +P+   Y  M
Sbjct: 490 EEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELM 549

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G  K  R DD      +M+ L  G++ +  ++VL    K   F+ A    K   ++G 
Sbjct: 550 ILGLMKENRSDDVQKTIRDMEEL-CGMNPLEISSVL---VKGECFDLAARQLKVAITNGY 605

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK--------- 486
             +  T  ++LG Y   G++ E   + E +K        L    LI ++ K         
Sbjct: 606 ELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLINEALIVLHCKVNNIGAALD 665

Query: 487 -------------GGL---------------YKEAMQIFREFKQAGLKADVVLYSALIDA 518
                        GG                Y EA Q+F E + +G +    +  +++  
Sbjct: 666 EYLADPCVHGWCFGGSTMYETLLHCCVANEHYAEASQVFSELRLSGCEPSESVCKSMVVV 725

Query: 519 LCKNGLVESAVSLLDEMTKEGIR-PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            CK G  E+A  ++++   +G        Y  II+A+G+              L ++ ES
Sbjct: 726 YCKLGFPETAYQVVNQAETKGFHFACSPMYTDIIEAYGK------------LKLWQKAES 773

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
                       +++++GRT +  +K +  L++  A  G  E R R        +F  M 
Sbjct: 774 VV---------GNLRQSGRTPD--LKTWNSLMSAYAECGCYE-RAR-------AIFNTMM 814

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQA 697
           +    P V + + +L+A       E+  +++EEL+    ++   +  L++    + + +A
Sbjct: 815 RDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLML----DAFARA 870

Query: 698 LSLFDEVKLMDSSTASAF------YNALTDMLWHFGQKRGAQLVVLE 738
            ++F+  K+  S  A+ +      Y  + ++L    + R A+++V E
Sbjct: 871 GNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSE 917


>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
          Length = 668

 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 212/421 (50%), Gaps = 10/421 (2%)

Query: 140 VSLGDILKKFEFKLCGADDYTFLLRELGN-RGEWSKAIQCFAFAVKREERKNDQGKLASA 198
           + L  +L++ +F L     Y+ LL  L N R     A+        RE R      L S 
Sbjct: 175 LRLLSLLREHDF-LPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSD 233

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRY 257
           +IS   R    D A  +  +A   G      A +ALISA G +G   EA ++F       
Sbjct: 234 LISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAG 293

Query: 258 NLKPNLVTYNAVIDACGKGGV---DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
            +KP    YNA++    KG V     K+  ++ D+M + GV PD  T++ L+   +R G 
Sbjct: 294 EIKPRTRAYNALL----KGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGR 349

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           WE+AR L  EM   G+    + ++ +L           AF ++ EM A  + P+   Y+ 
Sbjct: 350 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNV 409

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           MID + K   L  A++ F++M+  GI  D V++NT++  + K GR + A  + +EM  S 
Sbjct: 410 MIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN 469

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
                 TYN ++   G+Q  ++ V  M  +MK   + PN++TY+TL+DVY + G YKEA+
Sbjct: 470 CPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAI 529

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
                 K  GLK    +Y AL++A  + GL + A++++  M  +G+  +++  NS+I+AF
Sbjct: 530 DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAF 589

Query: 555 G 555
           G
Sbjct: 590 G 590



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 190/365 (52%), Gaps = 10/365 (2%)

Query: 197 SAMISILGRLGKVDLAKNIF-ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           +A+IS LG  G+V  A+ +F E  L         A++AL+  Y R    + A  V + M 
Sbjct: 267 TALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMS 326

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           +  + P+  TY+ ++DA  + G  ++    +  +M  +GV+P    F+ +LA     G W
Sbjct: 327 QCGVAPDEATYSLLVDAYTRAG-RWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDW 385

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAI----CKGAQMDLAFEIMAEMPAKNISPNVVT 371
           + A  +  EM   G+  D   YN ++D      C G  MD AF  M E   + I P+VVT
Sbjct: 386 QKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMD-AFNKMRE---EGIEPDVVT 441

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           ++T+ID + K GR D A  +F EM+         +YN ++++  +   +E    +  EM+
Sbjct: 442 WNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMK 501

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G+  + +TY  L+  YG+ G+Y E     E MKAD + P+   Y  L++ Y++ GL  
Sbjct: 502 EQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLAD 561

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            A+ + +  K  GL+  +++ ++LI+A  ++  V  A S+L  M + G+RP+V+TY +++
Sbjct: 562 HALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLM 621

Query: 552 DAFGR 556
            A  R
Sbjct: 622 KALIR 626



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 90/428 (21%), Positives = 187/428 (43%), Gaps = 69/428 (16%)

Query: 248 ISVFNSMKRYNLKPNLVTYNAVIDAC--GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           + + + ++ ++  P+L +Y+ ++ +    +   D   +  +  D+  + ++PD   F+ L
Sbjct: 175 LRLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDL 234

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-PAKN 364
           ++  +R  L +AA  L       G+         L+ A+    ++  A  +  E   A  
Sbjct: 235 ISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGE 294

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           I P    Y+ ++ GY +   L +A  +  EM   G+  D  +Y+ ++  Y + GR+E A 
Sbjct: 295 IKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
           ++ KEME+ G++  +  ++ +L G+  +G + +   +  +M+A  V P+   Y+ +ID +
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            K      AM  F + ++ G++ DVV ++ LIDA CK G  + A  L +EM +    P  
Sbjct: 415 GKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGT 474

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
            TYN +I+                  LG+Q+    ++AM S+    ++E G         
Sbjct: 475 TTYNIMINL-----------------LGEQEHWEGVEAMLSE----MKEQG--------- 504

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
                                               + PN++T++ +++   R   +++A
Sbjct: 505 ------------------------------------LVPNIITYTTLVDVYGRSGRYKEA 528

Query: 665 SMLLEELR 672
              +E ++
Sbjct: 529 IDCIEAMK 536



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 126/300 (42%), Gaps = 46/300 (15%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKN---DQGKLASAM 199
           +LK+ E        Y F  +L    +RG+W KA     FAV RE + +         + M
Sbjct: 356 LLKEMEADGVKPSSYVFSRILAGFRDRGDWQKA-----FAVLREMQASGVRPDRHFYNVM 410

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN- 258
           I   G+   +  A + F     EG    V  ++ LI A+ + G    A  +F  M+  N 
Sbjct: 411 IDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNC 470

Query: 259 ----------------------------------LKPNLVTYNAVIDACGKGGVDFKHVV 284
                                             L PN++TY  ++D  G+ G  +K  +
Sbjct: 471 PPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSG-RYKEAI 529

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +  + M  +G++P    +++L+   ++ GL + A N+   M   G++  I   N+L++A 
Sbjct: 530 DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAF 589

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
            +  ++  AF ++  M    + P+V+TY+T++    +  + D    ++ EM   G   DR
Sbjct: 590 GEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDR 649


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 230/456 (50%), Gaps = 23/456 (5%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           ++++ +I+   RSG   +A+ VF+ M    + PN +TYN +ID   KGG D +    + D
Sbjct: 195 FSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGG-DLEAGFRLRD 253

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            ML +G +P+ +T+N LL+   R G  +  R L +EM    +  D FTY+ L D + +  
Sbjct: 254 QMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTG 313

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +      + AE   K +     T S +++G  K G++  A  +F  +   G+    V YN
Sbjct: 314 ESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYN 373

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+++ Y ++     A  + ++M+S  IR D +TYNAL+ G  K     +   +  +M+  
Sbjct: 374 TLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKS 433

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V P++ T++TLID Y   G  ++   +  + +Q G+K+DV+ + +++ A CKNG +  A
Sbjct: 434 GVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEA 493

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LD 581
           V++LD+M  + + PN   YNSIIDA+  S  TE  +  VE+ +     SA+       L 
Sbjct: 494 VAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEK-MKNSGVSASIVTYNLLLK 552

Query: 582 AMC--SQDDKDVQEAGRTDNQIIK----VFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
            +C  SQ D+  +      NQ ++     +  +++    +G  +          L + Q+
Sbjct: 553 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDK--------ALELLQE 604

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           M+K  I+P + T   +++A +      D   L +++
Sbjct: 605 MNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQM 640



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 189/355 (53%), Gaps = 1/355 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++    + +  L++G    V  ++ L+S   R+G   E  ++ + M  +++ P+  TY
Sbjct: 243 GDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTY 302

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           + + D   + G + + ++ +F + L+ GV     T + LL    + G    A+ +F  +V
Sbjct: 303 SILFDGLTRTG-ESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLV 361

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
           H G+      YNTL++  C+   +  AF I  +M +++I P+ +TY+ +I+G  K   + 
Sbjct: 362 HTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVT 421

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            A ++  EM+  G+     ++NT++  Y   G+ E+   V  +M+  GI+ D +++ +++
Sbjct: 422 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVV 481

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
             + K GK  E   + + M    V+PN   Y+++ID Y + G  ++A+ +  + K +G+ 
Sbjct: 482 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVS 541

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           A +V Y+ L+  LC++  ++ A  L+  +  +G+RP+VV+YN+II A      T+
Sbjct: 542 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 596



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 184/361 (50%), Gaps = 3/361 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +   L R G+     ++F  +L +G     Y  S L++   + G   +A  VF  +  
Sbjct: 303 SILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVH 362

Query: 257 YNLKPNLVTYNAVIDACGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             L P  V YN +I+  G   V D +    IF+ M    ++PD IT+N+L+    +  + 
Sbjct: 363 TGLVPTTVIYNTLIN--GYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMV 420

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A +L  EM   G+D  + T+NTL+DA     Q++  F ++++M  K I  +V+++ ++
Sbjct: 421 TKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSV 480

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +  + K G++ +A+ +  +M +  +  +   YN+++  Y + G  E+ALL+ ++M++SG+
Sbjct: 481 VKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGV 540

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
               VTYN LL G  +  + DE   +   ++   + P++++Y+T+I      G   +A++
Sbjct: 541 SASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALE 600

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           + +E  + G++  +     L+ AL   G V     L  +M  + + P+   Y  ++DA+ 
Sbjct: 601 LLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYV 660

Query: 556 R 556
           R
Sbjct: 661 R 661



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 192/415 (46%), Gaps = 34/415 (8%)

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN--GVQPDRITFNSLLAVCSRGGLWEA 317
           +P+   +N V+ AC   G D    + +   M R+     PD  ++N ++A   R G    
Sbjct: 154 RPDTFAWNKVVQACVAAG-DLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSD 212

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +F+EMV  G+  +  TYNT++D   KG  ++  F +  +M      PNVVTY+ ++ 
Sbjct: 213 ALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLS 272

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  + GR+D+   +  EM    +  D  +Y+ +     + G  +  L +  E    G+  
Sbjct: 273 GLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVML 332

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
            A T + LL G  K GK  + +++FE +    + P  + Y+TLI+ Y +    + A  IF
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            + K   ++ D + Y+ALI+ LCK  +V  A  L+ EM K G+ P+V T+N++IDA+G +
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
              E                      C     D+Q+ G   + I   FG +V      GK
Sbjct: 453 GQLE---------------------KCFTVLSDMQQKGIKSDVI--SFGSVVKAFCKNGK 489

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                   I   + +   M    + PN   +++I++A       E A +L+E+++
Sbjct: 490 --------IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMK 536



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 190/382 (49%), Gaps = 3/382 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L   L   GE    +  FA ++K+           S +++ L + GKV  AK +FE 
Sbjct: 302 YSILFDGLTRTGESQTMLSLFAESLKKGVMLG--AYTCSILLNGLCKDGKVAKAKQVFEM 359

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            ++ G   T   ++ LI+ Y +    + A  +F  MK  +++P+ +TYNA+I+   K  +
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K   ++  +M ++GV P   TFN+L+      G  E    + ++M  +GI  D+ ++ 
Sbjct: 420 VTK-AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 478

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +++ A CK  ++  A  I+ +M  K+++PN   Y+++ID Y ++G  + AL +  +MK  
Sbjct: 479 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNS 538

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+    V+YN +L    +  + +EA  +   + + G+R D V+YN ++     +G  D+ 
Sbjct: 539 GVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKA 598

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + ++M    + P L T  TL+   +  G   +   ++++     ++    +Y  ++DA
Sbjct: 599 LELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 658

Query: 519 LCKNGLVESAVSLLDEMTKEGI 540
             +        SL  EM+++GI
Sbjct: 659 YVRCENDSKVASLKKEMSEKGI 680


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 198/373 (53%), Gaps = 5/373 (1%)

Query: 207 GKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           G+V+ A N  +   N+ G+    Y F+ L++   ++G+ + AI + + M +    P++ T
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           YN+VI    K G + K  VE+ D M+     P+ +T+N+L++   +    E A  L   +
Sbjct: 333 YNSVISGLCKLG-EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             +GI  D+ T+N+L+  +C      +A E+  EM +K   P+  TY+ +ID     G+L
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D+ALNM  +M+  G     ++YNT++  + K  +  EA  +  EME  G+ +++VTYN L
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K  + ++  ++ +QM  +   P+  TY++L+  + +GG  K+A  I +     G 
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-FGRSATTECTV 564
           + D+V Y  LI  LCK G VE A  LL  +  +GI      YN +I   F +  TTE   
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI- 630

Query: 565 DDVERDLGKQKES 577
            ++ R++ +Q E+
Sbjct: 631 -NLFREMLEQNEA 642



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 188/357 (52%), Gaps = 4/357 (1%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN-LKPNLVT 265
           G +D A  I E  +  G   +  + + ++  + + G  ++A++    M   +   P+  T
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNE 324
           +N +++   K G   KH +EI D ML+ G  PD  T+NS+++ +C  G + EA   + ++
Sbjct: 298 FNTLVNGLCKAG-HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE-VLDQ 355

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+ R    +  TYNTL+  +CK  Q++ A E+   + +K I P+V T++++I G      
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
              A+ +F EM+  G   D  +YN ++      G+ +EAL + K+ME SG  +  +TYN 
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G+ K  K  E   +F++M+   VS N +TY+TLID   K    ++A Q+  +    G
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            K D   Y++L+   C+ G ++ A  ++  MT  G  P++VTY ++I    ++   E
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 183/356 (51%), Gaps = 4/356 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +++ L + G V  A  I +  L EGY   VY ++++IS   + G  +EA+ V + M  
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            +  PN VTYN +I   C +  V+     E+   +   G+ PD  TFNSL+         
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVE--EATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  LF EM  +G + D FTYN L+D++C   ++D A  ++ +M     + +V+TY+T+
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG+ KA +  +A  +F EM+  G+  + V+YNT++    K  R E+A  +  +M   G 
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D  TYN+LL  + + G   +   + + M ++   P+++TY TLI    K G  + A +
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG-IRPNVVTYNSI 550
           + R  +  G+      Y+ +I  L +      A++L  EM ++    P+ V+Y  +
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 220/489 (44%), Gaps = 43/489 (8%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    V  F+ LI A  R+   + AI +   M  Y L P+  T+  V+    + G D   
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG-DLDG 242

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR-GIDQDIFTYNTLL 341
            + I + M+  G     ++ N ++    + G  E A N   EM ++ G   D +T+NTL+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           + +CK   +  A EIM  M  +   P+V TY+++I G  K G + +A+ +  +M      
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + V+YNT++S   K  + EEA  + + + S GI  D  T+N+L+ G      +     +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           FE+M++    P+  TY+ LID     G   EA+ + ++ + +G    V+ Y+ LID  CK
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL- 580
                 A  + DEM   G+  N VTYN++ID   +S   E              ++A L 
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE--------------DAAQLM 528

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
           D M  +  K  +    T N ++  F      + G  KK             + Q M    
Sbjct: 529 DQMIMEGQKPDK---YTYNSLLTHFC-----RGGDIKKAA----------DIVQAMTSNG 570

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRL----FDNQVYG-VAHGLLMGYRDNIWV 695
            +P++VT+  +++   +    E AS LL  +++         Y  V  GL   +R     
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL---FRKRKTT 627

Query: 696 QALSLFDEV 704
           +A++LF E+
Sbjct: 628 EAINLFREM 636



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 238/504 (47%), Gaps = 41/504 (8%)

Query: 247 AISVFN-SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A+ +FN + K+ N  P    Y  ++   G+ G  F  + +I +DM  +  +    TF  L
Sbjct: 66  ALRLFNLASKKPNFSPEPALYEEILLRLGRSG-SFDDMKKILEDMKSSRCEMGTSTFLIL 124

Query: 306 LAVCSRGGLWEAARNLFNEMVHR-GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           +   ++  L +   ++ + M+   G+  D   YN +L+ +  G  + L     A+M    
Sbjct: 125 IESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWG 184

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           I P+V T++ +I    +A +L  A+ M  +M   G+  D  ++ TV+  Y + G  + AL
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDV 483
            + ++M   G     V+ N ++ G+ K+G+ ++     ++M   D   P+  T++TL++ 
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K G  K A++I     Q G   DV  Y+++I  LCK G V+ AV +LD+M      PN
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
            VTYN++I       +T C  + VE       E+  L  + +   K +     T N +I+
Sbjct: 365 TVTYNTLI-------STLCKENQVE-------EATELARVLTS--KGILPDVCTFNSLIQ 408

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
             G  +        + +R   E+      F++M     +P+  T++ ++++       ++
Sbjct: 409 --GLCLT-------RNHRVAMEL------FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDE 453

Query: 664 ASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
           A  +L+++ L       + +  L+ G+ + N   +A  +FDE+++   S  S  YN L D
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLID 513

Query: 722 MLWHFGQ-KRGAQL---VVLEGKR 741
            L    + +  AQL   +++EG++
Sbjct: 514 GLCKSRRVEDAAQLMDQMIMEGQK 537



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 4/109 (3%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            +IS L + G+V++A  +  +   +G   T +A++ +I    R     EAI++F  M   
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639

Query: 258 N-LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           N   P+ V+Y  V      GG   +  V+   ++L  G  P+   F+SL
Sbjct: 640 NEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE---FSSL 685


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 208/398 (52%), Gaps = 38/398 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR---------------- 240
           + +++++ ++ K D+   ++    N G  + +Y+F+ LI  + R                
Sbjct: 83  TRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMK 142

Query: 241 --------------SGYCQ-----EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
                         +G+CQ     EA+S+ +SM  +   PN+V YN VI+   K   D  
Sbjct: 143 LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR-DLN 201

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
           + +E+F  M + G++ D +T+N+L++  S  G W  A  L  +MV R ID ++  +  L+
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           D   K   +  A  +  EM  +++ PNV TY+++I+G+   G L DA  MF  M   G  
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D V+YNT+++ + K  R E+ + +  EM   G+  DA TYN L+ GY + GK +  +++
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381

Query: 462 FEQMKADC-VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           F +M  DC VSP+++TY+ L+D     G  ++A+ +  + +++ +  D++ Y+ +I  LC
Sbjct: 382 FNRM-VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +   ++ A  L   +T++G++P+ + Y ++I    R  
Sbjct: 441 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 202/428 (47%), Gaps = 39/428 (9%)

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           + F     +F +ML++   P  + F  +L V ++   ++    L+++M + GI  D++++
Sbjct: 58  IKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 117

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             L+   C+ +++ LA  ++ +M      P++VT  ++++G+ +  R  +A+++   M  
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   + V YNTV++   K      AL V   ME  GIR DAVTYN L+ G    G++ +
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             R+   M    + PN++ ++ LID + K G   EA  +++E  +  +  +V  Y++LI+
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
             C +G +  A  + D M  +G  P+VVTYN++I  F +S   E                
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE---------------- 341

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
             +   C    + +     T N +I  + Q  A K    +K             VF +M 
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ--AGKLNVAQK-------------VFNRMV 386

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQA 697
              + P++VT++ +L+        E A +++E+L+  +  V  + +        NI +Q 
Sbjct: 387 DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY--------NIIIQG 438

Query: 698 LSLFDEVK 705
           L   D++K
Sbjct: 439 LCRTDKLK 446



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 156/302 (51%), Gaps = 3/302 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  +F     +G       ++ LIS    SG   +A  +   M +  + PN++ + A+ID
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGI 330
              K G +      ++ +M+R  V P+  T+NSL+   C  G L +A + +F+ MV +G 
Sbjct: 263 TFVKEG-NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA-KYMFDLMVSKGC 320

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             D+ TYNTL+   CK  +++   ++  EM  + +  +  TY+T+I GY +AG+L+ A  
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +F+ M   G+  D V+YN +L      G+ E+AL++ ++++ S +  D +TYN ++ G  
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           +  K  E   +F  +    V P+ + Y T+I    + GL +EA ++ R  K+ G      
Sbjct: 441 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSER 500

Query: 511 LY 512
           +Y
Sbjct: 501 IY 502



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 187/391 (47%), Gaps = 6/391 (1%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K D A ++F   L      ++  F+ +++   +       I +++ M+   +  +L ++ 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            +I  C          + +   M++ G +P  +T  SLL    +G  ++ A +L + M  
Sbjct: 119 ILIH-CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G   ++  YNT+++ +CK   ++ A E+   M  K I  + VTY+T+I G + +GR  D
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +  +M    I  + + +  ++  + K G   EA  + KEM    +  +  TYN+L+ 
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           G+   G   + + MF+ M +    P+++TY+TLI  + K    ++ M++F E    GL  
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           D   Y+ LI   C+ G +  A  + + M   G+ P++VTYN ++D    +   E  +  V
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
           E DL  QK   ++D +    +  +Q   RTD
Sbjct: 418 E-DL--QKSEMDVDII--TYNIIIQGLCRTD 443



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 178/352 (50%), Gaps = 9/352 (2%)

Query: 137 RDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA 196
           ++ VSL D +  F F +     Y  ++  L    + + A++ F    K+  R +      
Sbjct: 166 QEAVSLVDSMDGFGF-VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD--AVTY 222

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS L   G+   A  +    +       V  F+ALI  + + G   EA +++  M R
Sbjct: 223 NTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR 282

Query: 257 YNLKPNLVTYNAVIDA-CGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
            ++ PN+ TYN++I+  C  G + D K+   +FD M+  G  PD +T+N+L+    +   
Sbjct: 283 RSVVPNVFTYNSLINGFCIHGCLGDAKY---MFDLMVSKGCFPDVVTYNTLITGFCKSKR 339

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E    LF EM ++G+  D FTYNTL+   C+  ++++A ++   M    +SP++VTY+ 
Sbjct: 340 VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 399

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++D     G+++ AL M  +++   + +D ++YN ++    +  + +EA  + + +   G
Sbjct: 400 LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY-STLIDVYS 485
           ++ DA+ Y  ++ G  ++G   E  ++  +MK D   P+   Y  TL D Y+
Sbjct: 460 VKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYT 511



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 100/432 (23%), Positives = 183/432 (42%), Gaps = 46/432 (10%)

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           + D AF +  EM      P++V ++ ++   AK  + D  + ++ +M+ LGI  D  S+ 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            ++  + +  R   AL +  +M   G R   VT  +LL G+ +  ++ E   + + M   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
              PN++ Y+T+I+   K      A+++F   ++ G++AD V Y+ LI  L  +G    A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
             LL +M K  I PNV+ + ++ID F +               G   E+ NL        
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKE--------------GNLLEARNLYK--EMIR 282

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
           + V     T N +I   G  +    G  K              +F  M      P+VVT+
Sbjct: 283 RSVVPNVFTYNSLIN--GFCIHGCLGDAKY-------------MFDLMVSKGCFPDVVTY 327

Query: 649 SAILNACSRCNSFEDASMLLEELR----LFDNQVYG-VAHGLLMGYRDNIWVQALSLFDE 703
           + ++    +    ED   L  E+     + D   Y  + HG     + N+   A  +F+ 
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV---AQKVFNR 384

Query: 704 VKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGA 763
           +     S     YN L D L + G+   A ++V + ++ ++  ++     +  +++  G 
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDI-----ITYNIIIQGL 439

Query: 764 ARA--MVHAWLL 773
            R   +  AW L
Sbjct: 440 CRTDKLKEAWCL 451


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 206/375 (54%), Gaps = 17/375 (4%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +  +++   + G+ Q+A  +   M++ + KPN   Y+ VIDA  K G+       + ++M
Sbjct: 181 YGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGM-LDGATSLLNEM 239

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
            +  + PD  T+++L+    +   WE  R LF EM+H  I  ++ T+N+++D +CK  ++
Sbjct: 240 KQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           + A EIM  M  K + P+V+TY+ +IDGY   G++D A  +F  M    I  + +SYN +
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNIL 359

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           ++ YA+  + +EA+ VC+E+   G++   VT N LL G  + G+    +  F++M +   
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            P+L T+ TL+  Y K GL +EAM  F + ++     ++ +Y+A+ID LCKNG ++ A +
Sbjct: 420 IPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHA 479

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
             +++   G+ P+V+TY ++I  + +         D  +D+ ++ E    D  C  D+  
Sbjct: 480 TFEKLPLIGLHPDVITYTAMISGYCQEGLL-----DEAKDMLRKME----DNGCLADN-- 528

Query: 591 VQEAGRTDNQIIKVF 605
                RT N I++ F
Sbjct: 529 -----RTYNVIVRGF 538



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 176/327 (53%), Gaps = 1/327 (0%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +S +I A+ + G    A S+ N MK+ ++ P++ TY+ +IDA  K    +++V  +F +M
Sbjct: 216 YSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLS-QWENVRTLFLEM 274

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           +   + P+  TFNS++    + G  E A  +   M+ +G+D D+ TYN ++D      Q+
Sbjct: 275 IHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQV 334

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           D A EI   M  K+I PN+++Y+ +I+GYA+  ++D+A+ +  E+   G+    V+ N +
Sbjct: 335 DRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVL 394

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           L    +LGR + A     EM S+G   D  T+  LLGGY K G  +E    F +++    
Sbjct: 395 LHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRE 454

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
             N+  Y+ +ID   K G   +A   F +    GL  DV+ Y+A+I   C+ GL++ A  
Sbjct: 455 DTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKD 514

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           +L +M   G   +  TYN I+  F RS
Sbjct: 515 MLRKMEDNGCLADNRTYNVIVRGFLRS 541



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/537 (22%), Positives = 243/537 (45%), Gaps = 74/537 (13%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG------------ 274
           +V +FS L+ A     +    +S+F  + +  +  +    + V+++C             
Sbjct: 71  SVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVL 130

Query: 275 ----KGGVDFKHV------------------VEIFDDMLRNGV-QPDRITFNSLLAVCSR 311
               K G+ F  V                  V +F  ++R  + +P+ + + +++    +
Sbjct: 131 AIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCK 190

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            G  + A +L   M       +   Y+ ++DA CK   +D A  ++ EM  K+I P++ T
Sbjct: 191 KGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFT 250

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           YST+ID   K  + ++   +F EM  L I  +  ++N+V+    K G+ E+A  + + M 
Sbjct: 251 YSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMI 310

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G+  D +TYN ++ GYG +G+ D  R +F+ M    + PN+++Y+ LI+ Y++     
Sbjct: 311 EKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKID 370

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EAMQ+ RE  Q GLK  +V  + L+  L + G  +SA +  DEM   G  P++ T+ +++
Sbjct: 371 EAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLL 430

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
             + ++   E  +    + L +++E  N                      I+++  ++  
Sbjct: 431 GGYFKNGLVEEAMSHFHK-LERRREDTN----------------------IQIYTAVIDG 467

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               GK +             F+K+  + + P+V+T++A+++   +    ++A  +L ++
Sbjct: 468 LCKNGKLDKA--------HATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKM 519

Query: 672 R----LFDNQVYGV-AHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
                L DN+ Y V   G L   R N   +  +  +E+     S  +A    L D++
Sbjct: 520 EDNGCLADNRTYNVIVRGFL---RSNKVSEMKAFLEEIAGKSFSFEAATVELLMDII 573



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 193/413 (46%), Gaps = 5/413 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  ++  L  +G   KA        +   + N    + S +I    + G +D A ++   
Sbjct: 181 YGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTC--IYSIVIDAFCKDGMLDGATSLLNE 238

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
              +     ++ +S LI A  +    +   ++F  M   N+ PN+ T+N+VID  C +G 
Sbjct: 239 MKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGK 298

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           V+     EI   M+  GV PD IT+N ++      G  + AR +F+ M+++ I+ +I +Y
Sbjct: 299 VE--DAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISY 356

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L++   +  ++D A ++  E+  K + P++VT + ++ G  + GR   A N F EM  
Sbjct: 357 NILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLS 416

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   D  ++ T+L  Y K G  EEA+    ++E      +   Y A++ G  K GK D+
Sbjct: 417 AGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDK 476

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
               FE++    + P+++TY+ +I  Y + GL  EA  + R+ +  G  AD   Y+ ++ 
Sbjct: 477 AHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVR 536

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
              ++  V    + L+E+  +       T   ++D      +    + +  RD
Sbjct: 537 GFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEFHRD 589



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/498 (23%), Positives = 223/498 (44%), Gaps = 44/498 (8%)

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNA-VIDACGKGGV--DFKHV------VEIFDDMLRN 293
           YC    + F S   Y++ P   + N   I   G  GV  +F++V        +F  M+R 
Sbjct: 8   YCLNG-NPFFSFFAYSIAPRHYSTNTRSISVKGNFGVSNEFENVKCLDDAFSLFRQMVRT 66

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
              P  ++F+ LL        + +  +LF E+    I    F  + ++++ C   + DL 
Sbjct: 67  KPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLG 126

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG-LDRVSYNTVLS 412
           F ++A    K I  N V ++T++ G     ++ DA+++F ++    I   + V Y TV++
Sbjct: 127 FSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMN 186

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              K G  ++A  + + ME    + +   Y+ ++  + K G  D    +  +MK   + P
Sbjct: 187 GLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPP 246

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           ++ TYSTLID   K   ++    +F E     +  +V  ++++ID LCK G VE A  ++
Sbjct: 247 DIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIM 306

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQ 592
             M ++G+ P+V+TYN IID +G          D  R++         D+M ++      
Sbjct: 307 RYMIEKGVDPDVITYNMIIDGYGLRGQV-----DRAREI--------FDSMINKS----- 348

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
                +  II  +  L+   A Q K +          + V +++ +  +KP++VT + +L
Sbjct: 349 ----IEPNIIS-YNILINGYARQKKIDEA--------MQVCREISQKGLKPSIVTCNVLL 395

Query: 653 NACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSS 710
           +        + A    +E+    +      H  L+G  +++ +  +A+S F +++     
Sbjct: 396 HGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRED 455

Query: 711 TASAFYNALTDMLWHFGQ 728
           T    Y A+ D L   G+
Sbjct: 456 TNIQIYTAVIDGLCKNGK 473


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 210/398 (52%), Gaps = 3/398 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +  L+R         +A +CF   + +E+    + +  + M+S+  +L ++++A  ++  
Sbjct: 182 FDLLVRVCCELRRADEAFKCFY--MMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                  +TVY F+ +++   + G  ++A      M+    KPN+V+YN +I      G 
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG- 298

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           + +    I D M   G++PD  T+ SL++   + G  E A  LF++MV  G+  +  TYN
Sbjct: 299 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 358

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+D  C    ++ AF    EM  K I P+V TY+ ++      GR+ +A +M  EM+  
Sbjct: 359 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 418

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI  D ++YN +++ Y++ G  ++A  +  EM S GI    VTY +L+    ++ +  E 
Sbjct: 419 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 478

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +FE++    VSP+++ ++ ++D +   G  + A  + +E  +  +  D V ++ L+  
Sbjct: 479 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 538

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            C+ G VE A  LLDEM + GI+P+ ++YN++I  +GR
Sbjct: 539 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGR 576



 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 186/354 (52%), Gaps = 3/354 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++ A+ I +    +G     Y + +LIS   + G  +EA  +F+ M    L PN VTY
Sbjct: 298 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 357

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +ID  C KG  D +      D+M++ G+ P   T+N L+      G    A ++  EM
Sbjct: 358 NTLIDGYCNKG--DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 415

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             +GI  D  TYN L++   +      AF++  EM +K I P  VTY+++I   ++  R+
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 475

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            +A ++F ++   G+  D + +N ++  +   G  E A ++ KEM+   +  D VT+N L
Sbjct: 476 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 535

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  ++GK +E R + ++MK   + P+ ++Y+TLI  Y + G  K+A ++  E    G 
Sbjct: 536 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 595

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
              ++ Y+ALI  LCKN   + A  LL EM  +GI P+  TY S+I+  G   T
Sbjct: 596 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDT 649



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 225/476 (47%), Gaps = 38/476 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++ +   L + D A   F     +G    +   + ++S + +    + A  ++  M R  
Sbjct: 185 LVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLR 244

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           +   + T+N +++   K G   K   E    M   G +P+ +++N+++   S  G  E A
Sbjct: 245 ISSTVYTFNIMVNVLCKEG-KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGA 303

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           R + + M  +GI+ D +TY +L+  +CK  +++ A  +  +M    + PN VTY+T+IDG
Sbjct: 304 RRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDG 363

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y   G L+ A +   EM   GI     +YN ++      GR  EA  + KEM   GI  D
Sbjct: 364 YCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 423

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           A+TYN L+ GY + G   +   +  +M +  + P  +TY++LI V S+    KEA  +F 
Sbjct: 424 AITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFE 483

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +    G+  DV++++A++D  C NG VE A  LL EM ++ + P+ VT+N+++    R  
Sbjct: 484 KILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG 543

Query: 559 TTE---CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
             E     +D+++R                   + ++    + N +I  +G     + G 
Sbjct: 544 KVEEARMLLDEMKR-------------------RGIKPDHISYNTLISGYG-----RRGD 579

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            K   R R E+L I             P ++T++A++    +    + A  LL+E+
Sbjct: 580 IKDAFRVRDEMLSI----------GFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 625



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 212/462 (45%), Gaps = 37/462 (8%)

Query: 285 EIFDDMLRNGVQPDR------ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           E+FD++    +  DR      I F+ L+ VC      + A   F  M  +GI   I T N
Sbjct: 162 ELFDEL---TLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCN 218

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            +L    K  +M++A+ + AEM    IS  V T++ M++   K G+L  A      M+ L
Sbjct: 219 DMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGL 278

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   + VSYNT++  Y+  G  E A  +   M   GI  D+ TY +L+ G  K+G+ +E 
Sbjct: 279 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 338

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +F++M    + PN +TY+TLID Y   G  + A     E  + G+   V  Y+ L+ A
Sbjct: 339 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 398

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
           L   G +  A  ++ EM K+GI P+ +TYN +I+ + R    +   D     L K  E  
Sbjct: 399 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 458

Query: 579 NL------------DAMCSQDD--KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
           ++            + M   DD  + + + G + + I+  F  +V      G  E     
Sbjct: 459 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM--FNAMVDGHCANGNVER---- 512

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG 684
                  + ++M +  + P+ VTF+ ++    R    E+A MLL+E++    +   +++ 
Sbjct: 513 ----AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYN 568

Query: 685 LLM---GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
            L+   G R +I   A  + DE+  +  +     YNAL   L
Sbjct: 569 TLISGYGRRGDIK-DAFRVRDEMLSIGFNPTLLTYNALIKCL 609



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 108/190 (56%), Gaps = 3/190 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I +L R  ++  A ++FE  L++G    V  F+A++  +  +G  + A  +   M R
Sbjct: 463 TSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDR 522

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            ++ P+ VT+N ++   C +G V+   +  + D+M R G++PD I++N+L++   R G  
Sbjct: 523 KSVPPDEVTFNTLMQGRCREGKVEEARM--LLDEMKRRGIKPDHISYNTLISGYGRRGDI 580

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  + +EM+  G +  + TYN L+  +CK  + DLA E++ EM  K ISP+  TY ++
Sbjct: 581 KDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 640

Query: 376 IDGYAKAGRL 385
           I+G      L
Sbjct: 641 IEGMGNVDTL 650


>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g42310, mitochondrial; Flags: Precursor
 gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
 gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 709

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 191/362 (52%), Gaps = 1/362 (0%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           +L + +I    + G    A  +   A   G         ++ISA   SG   EA ++F  
Sbjct: 270 QLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEE 329

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           +++  +KP    YNA++    K G   K    +  +M + GV PD  T++ L+      G
Sbjct: 330 LRQSGIKPRTRAYNALLKGYVKTG-PLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAG 388

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            WE+AR +  EM    +  + F ++ LL       +    F+++ EM +  + P+   Y+
Sbjct: 389 RWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYN 448

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +ID + K   LD A+  F  M   GI  DRV++NT++  + K GR   A  + + ME  
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G    A TYN ++  YG Q ++D+++R+  +MK+  + PN++T++TL+DVY K G + +A
Sbjct: 509 GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDA 568

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           ++   E K  GLK    +Y+ALI+A  + GL E AV+    MT +G++P+++  NS+I+A
Sbjct: 569 IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINA 628

Query: 554 FG 555
           FG
Sbjct: 629 FG 630



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 196/410 (47%), Gaps = 40/410 (9%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNT 227
           G+ SKA+Q    A    +      K A+  ++IS L   G+   A+ +FE     G    
Sbjct: 283 GDPSKALQLLGMA----QATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPR 338

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV--------- 278
             A++AL+  Y ++G  ++A S+ + M++  + P+  TY+ +IDA    G          
Sbjct: 339 TRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLK 398

Query: 279 -------------------------DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
                                    +++   ++  +M   GV+PDR  +N ++    +  
Sbjct: 399 EMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFN 458

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             + A   F+ M+  GI+ D  T+NTL+D  CK  +  +A E+   M  +   P   TY+
Sbjct: 459 CLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYN 518

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            MI+ Y    R DD   +  +MK  GI  + V++ T++ +Y K GRF +A+   +EM+S 
Sbjct: 519 IMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSV 578

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G++  +  YNAL+  Y ++G  ++    F  M +D + P+LL  ++LI+ + +     EA
Sbjct: 579 GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEA 638

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             + +  K+ G+K DVV Y+ L+ AL +    +    + +EM   G +P+
Sbjct: 639 FAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 153/291 (52%), Gaps = 1/291 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           + FS L++ +   G  Q+   V   MK   +KP+   YN VID  GK      H +  FD
Sbjct: 410 FVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNC-LDHAMTTFD 468

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            ML  G++PDR+T+N+L+    + G    A  +F  M  RG      TYN ++++     
Sbjct: 469 RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 528

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           + D    ++ +M ++ I PNVVT++T++D Y K+GR +DA+    EMK +G+      YN
Sbjct: 529 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 588

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +++ YA+ G  E+A+   + M S G++   +  N+L+  +G+  +  E   + + MK +
Sbjct: 589 ALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKEN 648

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            V P+++TY+TL+    +   +++   ++ E   +G K D    S L  AL
Sbjct: 649 GVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/533 (22%), Positives = 240/533 (45%), Gaps = 77/533 (14%)

Query: 195 LASAMISILGRLGKVDLAKNIFET-ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           L S +I  LGR      ++ ++E   L++    T   ++ALI A  R+   ++A+++   
Sbjct: 169 LYSILIHALGR------SEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAK 222

Query: 254 MKRYNLKPNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M++   + + V Y+ VI +  +   +D   ++ ++ ++ R+ ++ D    N ++   ++ 
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G    A  L       G+     T  +++ A+    +   A  +  E+    I P    Y
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + ++ GY K G L DA +M SEM+  G+  D  +Y+ ++  Y   GR+E A +V KEME+
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402

Query: 433 SGIRKDAVTYNALLGGYGKQGK----------------------YDEVRR---------- 460
             ++ ++  ++ LL G+  +G+                      Y+ V            
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462

Query: 461 ---MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
               F++M ++ + P+ +T++TLID + K G +  A ++F   ++ G       Y+ +I+
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQK 575
           +       +    LL +M  +GI PNVVT+ +++D +G+S      ++ +E  + +G + 
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582

Query: 576 ESANLDAMC--------SQDDKDVQEAGRTD---------NQIIKVFGQLVAEKAGQGKK 618
            S   +A+         S+   +      +D         N +I  FG            
Sbjct: 583 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFG------------ 630

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           E+R   E   +L   Q M +  +KP+VVT++ ++ A  R + F+   ++ EE+
Sbjct: 631 EDRRDAEAFAVL---QYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 126/532 (23%), Positives = 226/532 (42%), Gaps = 96/532 (18%)

Query: 197 SAMISILGRLGKVDLAKNIFETA------LNEGYGNTVYAFSALISAYGRSGYCQE---- 246
           S ++  L R G V+LA +    +      LN    + V ++ A+ + Y  S         
Sbjct: 85  SPLLKFLSRFGPVELALDSESESEASPESLNPVEFDLVESYRAVPAPYWHSLIKSLTSST 144

Query: 247 -----AISVFNSMKRYNLKPNL-VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
                A +V + ++++NL  +  + Y+ +I A G+     + + E F    +  + P  +
Sbjct: 145 SSLGLAYAVVSWLQKHNLCFSYELLYSILIHALGRS----EKLYEAFLLSQKQTLTP--L 198

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD--------- 351
           T+N+L+  C+R    E A NL  +M   G   D   Y+ ++ ++ +  ++D         
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258

Query: 352 ----------------------------LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
                                        A +++    A  +S    T  ++I   A +G
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           R  +A  +F E++  GI     +YN +L  Y K G  ++A  +  EME  G+  D  TY+
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+  Y   G+++  R + ++M+A  V PN   +S L+  +   G +++  Q+ +E K  
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 438

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGRSATT 560
           G+K D   Y+ +ID   K   ++ A++  D M  EGI P+ VT+N++ID     GR    
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 498

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
           E   + +ER                   +       T N +I  +G        Q + ++
Sbjct: 499 EEMFEAMER-------------------RGCLPCATTYNIMINSYGD-------QERWDD 532

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             R     +LG   KM    I PNVVT + +++   +   F DA   LEE++
Sbjct: 533 MKR-----LLG---KMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 122/311 (39%), Gaps = 69/311 (22%)

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
           C S  LL YS LI    +     EA  + ++     L      Y+ALI A  +N  +E A
Sbjct: 163 CFSYELL-YSILIHALGRSEKLYEAFLLSQKQTLTPLT-----YNALIGACARNNDIEKA 216

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV-----DDVERD------------- 570
           ++L+ +M ++G + + V Y+ +I +  RS   +  +      ++ERD             
Sbjct: 217 LNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDII 276

Query: 571 ---------------------LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
                                 G   ++A L ++ S     + ++GRT      +  + +
Sbjct: 277 MGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISA----LADSGRT------LEAEAL 326

Query: 610 AEKAGQGKKENRCRQEILCILG------------VFQKMHKLKIKPNVVTFSAILNACSR 657
            E+  Q   + R R     + G            +  +M K  + P+  T+S +++A   
Sbjct: 327 FEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVN 386

Query: 658 CNSFEDASMLLEELRLFDNQVYG-VAHGLLMGYRDN-IWVQALSLFDEVKLMDSSTASAF 715
              +E A ++L+E+   D Q    V   LL G+RD   W +   +  E+K +       F
Sbjct: 387 AGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF 446

Query: 716 YNALTDMLWHF 726
           YN + D    F
Sbjct: 447 YNVVIDTFGKF 457


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 208/398 (52%), Gaps = 38/398 (9%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR---------------- 240
            + +++++ ++ K D+   ++    N G  + +Y+F+ LI  + R                
Sbjct: 608  TRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMK 667

Query: 241  --------------SGYCQ-----EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
                          +G+CQ     EA+S+ +SM  +   PN+V YN VI+   K   D  
Sbjct: 668  LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR-DLN 726

Query: 282  HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            + +E+F  M + G++ D +T+N+L++  S  G W  A  L  +MV R ID ++  +  L+
Sbjct: 727  NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 786

Query: 342  DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
            D   K   +  A  +  EM  +++ PNV TY+++I+G+   G L DA  MF  M   G  
Sbjct: 787  DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 846

Query: 402  LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
             D V+YNT+++ + K  R E+ + +  EM   G+  DA TYN L+ GY + GK +  +++
Sbjct: 847  PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 906

Query: 462  FEQMKADC-VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
            F +M  DC VSP+++TY+ L+D     G  ++A+ +  + +++ +  D++ Y+ +I  LC
Sbjct: 907  FNRM-VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 965

Query: 521  KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            +   ++ A  L   +T++G++P+ + Y ++I    R  
Sbjct: 966  RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1003



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 199/405 (49%), Gaps = 6/405 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    R  ++  A ++    +  GY  ++  F +L+  +       +A S+   M +
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +PN+V YN +ID   K G +    +E+ ++M + G+  D +T+N+LL      G W 
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNG-ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +  +M+ R I+ D+ T+  L+D   K   +D A E+  EM   ++ PN VTY+++I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G    GRL DA   F  M   G   + V+YNT++S + K    +E + + + M   G  
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  TYN L+ GY + GK      +F  M +  V+P+++T+  L+      G  + A+  
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F + +++     +V Y+ +I  LCK   VE A  L   +  EG++P+  TY  +I    +
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
           +       D++ R   + KE   +  M ++DD  ++E   ++ +I
Sbjct: 469 NGPRR-EADELIR---RMKEEGIICQMNAEDDH-LEEHSSSNKEI 508



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 181/350 (51%), Gaps = 14/350 (4%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA---CGKGGVD 279
           G  + +Y+F+ LI  + R      A+SV   M +   +P++VT+ +++       + G  
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
           F  V+     M+++G +P+ + +N+L+    + G    A  L NEM  +G+  D+ TYNT
Sbjct: 161 FSLVIL----MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           LL  +C   +   A  ++ +M  ++I+P+VVT++ +ID + K G LD+A  ++ EM    
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           +  + V+YN++++     GR  +A      M S G   + VTYN L+ G+ K    DE  
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++F++M  +  + ++ TY+TLI  Y + G  + A+ IF       +  D++ +  L+  L
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           C NG +ESA+   D+M +      +V YN +I          C  D VE+
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL-------CKADKVEK 439



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 202/428 (47%), Gaps = 39/428 (9%)

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           + F     +F +ML++   P  + F  +L V ++   ++    L+++M + GI  D++++
Sbjct: 583 IKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 642

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             L+   C+ +++ LA  ++ +M      P++VT  ++++G+ +  R  +A+++   M  
Sbjct: 643 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 702

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   + V YNTV++   K      AL V   ME  GIR DAVTYN L+ G    G++ +
Sbjct: 703 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 762

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             R+   M    + PN++ ++ LID + K G   EA  +++E  +  +  +V  Y++LI+
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
             C +G +  A  + D M  +G  P+VVTYN++I  F +S   E                
Sbjct: 823 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE---------------- 866

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
             +   C    + +     T N +I  + Q  A K    +K             VF +M 
Sbjct: 867 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ--AGKLNVAQK-------------VFNRMV 911

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQA 697
              + P++VT++ +L+        E A +++E+L+  +  V  + +        NI +Q 
Sbjct: 912 DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY--------NIIIQG 963

Query: 698 LSLFDEVK 705
           L   D++K
Sbjct: 964 LCRTDKLK 971



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 145/279 (51%)

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           + F+    +F +M+ +   P  + F  LL   +    +E       +M   GI  D++++
Sbjct: 50  IRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSF 109

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             L+   C+ +++  A  ++ +M      P++VT+ +++ G+    R+ DA ++   M  
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   + V YNT++    K G    AL +  EME  G+  D VTYN LL G    G++ +
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             RM   M    ++P+++T++ LIDV+ K G   EA ++++E  Q+ +  + V Y+++I+
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            LC +G +  A    D M  +G  PNVVTYN++I  F +
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 160/321 (49%), Gaps = 1/321 (0%)

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           ++A ++F  M      P++V +  ++ A       ++ V+     M   G+  D  +F  
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLR-RYETVIYFSQKMELYGISHDLYSFTI 111

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L+    R      A ++  +M+  G +  I T+ +LL   C   ++  AF ++  M    
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
             PNVV Y+T+IDG  K G L+ AL + +EM+  G+G D V+YNT+L+     GR+ +A 
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            + ++M    I  D VT+ AL+  + KQG  DE + ++++M    V PN +TY+++I+  
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
              G   +A + F      G   +VV Y+ LI   CK  +V+  + L   M+ EG   ++
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351

Query: 545 VTYNSIIDAFGRSATTECTVD 565
            TYN++I  + +       +D
Sbjct: 352 FTYNTLIHGYCQVGKLRVALD 372



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 156/302 (51%), Gaps = 3/302 (0%)

Query: 212  AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
            A  +F     +G       ++ LIS    SG   +A  +   M +  + PN++ + A+ID
Sbjct: 728  ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 787

Query: 272  ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGI 330
               K G +      ++ +M+R  V P+  T+NSL+   C  G L +A + +F+ MV +G 
Sbjct: 788  TFVKEG-NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA-KYMFDLMVSKGC 845

Query: 331  DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
              D+ TYNTL+   CK  +++   ++  EM  + +  +  TY+T+I GY +AG+L+ A  
Sbjct: 846  FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 905

Query: 391  MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
            +F+ M   G+  D V+YN +L      G+ E+AL++ ++++ S +  D +TYN ++ G  
Sbjct: 906  VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 965

Query: 451  KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
            +  K  E   +F  +    V P+ + Y T+I    + GL +EA ++ R  K+ G      
Sbjct: 966  RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSER 1025

Query: 511  LY 512
            +Y
Sbjct: 1026 IY 1027



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 187/391 (47%), Gaps = 6/391 (1%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K D A ++F   L      ++  F+ +++   +       I +++ M+   +  +L ++ 
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            +I  C          + +   M++ G +P  +T  SLL    +G  ++ A +L + M  
Sbjct: 644 ILIH-CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 702

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G   ++  YNT+++ +CK   ++ A E+   M  K I  + VTY+T+I G + +GR  D
Sbjct: 703 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 762

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +  +M    I  + + +  ++  + K G   EA  + KEM    +  +  TYN+L+ 
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           G+   G   + + MF+ M +    P+++TY+TLI  + K    ++ M++F E    GL  
Sbjct: 823 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 882

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           D   Y+ LI   C+ G +  A  + + M   G+ P++VTYN ++D    +   E  +  V
Sbjct: 883 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 942

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
           E DL  QK   ++D +    +  +Q   RTD
Sbjct: 943 E-DL--QKSEMDVDII--TYNIIIQGLCRTD 968



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 178/352 (50%), Gaps = 9/352 (2%)

Query: 137  RDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA 196
            ++ VSL D +  F F +     Y  ++  L    + + A++ F    K+  R +      
Sbjct: 691  QEAVSLVDSMDGFGF-VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD--AVTY 747

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            + +IS L   G+   A  +    +       V  F+ALI  + + G   EA +++  M R
Sbjct: 748  NTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR 807

Query: 257  YNLKPNLVTYNAVIDA-CGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
             ++ PN+ TYN++I+  C  G + D K+   +FD M+  G  PD +T+N+L+    +   
Sbjct: 808  RSVVPNVFTYNSLINGFCIHGCLGDAKY---MFDLMVSKGCFPDVVTYNTLITGFCKSKR 864

Query: 315  WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             E    LF EM ++G+  D FTYNTL+   C+  ++++A ++   M    +SP++VTY+ 
Sbjct: 865  VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 924

Query: 375  MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
            ++D     G+++ AL M  +++   + +D ++YN ++    +  + +EA  + + +   G
Sbjct: 925  LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 984

Query: 435  IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY-STLIDVYS 485
            ++ DA+ Y  ++ G  ++G   E  ++  +MK D   P+   Y  TL D Y+
Sbjct: 985  VKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYT 1036



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 166/393 (42%), Gaps = 39/393 (9%)

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           + D AF +  EM      P++V ++ ++   AK  + D  + ++ +M+ LGI  D  S+ 
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            ++  + +  R   AL +  +M   G R   VT  +LL G+ +  ++ E   + + M   
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
              PN++ Y+T+I+   K      A+++F   ++ G++AD V Y+ LI  L  +G    A
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
             LL +M K  I PNV+ + ++ID F +               G   E+ NL        
Sbjct: 764 ARLLRDMVKRKIDPNVIFFTALIDTFVKE--------------GNLLEARNLYK--EMIR 807

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
           + V     T N +I   G  +    G  K              +F  M      P+VVT+
Sbjct: 808 RSVVPNVFTYNSLIN--GFCIHGCLGDAKY-------------MFDLMVSKGCFPDVVTY 852

Query: 649 SAILNACSRCNSFEDASMLLEELR----LFDNQVYG-VAHGLLMGYRDNIWVQALSLFDE 703
           + ++    +    ED   L  E+     + D   Y  + HG     + N+   A  +F+ 
Sbjct: 853 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV---AQKVFNR 909

Query: 704 VKLMDSSTASAFYNALTDMLWHFGQKRGAQLVV 736
           +     S     YN L D L + G+   A ++V
Sbjct: 910 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 942



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 88/384 (22%), Positives = 169/384 (44%), Gaps = 38/384 (9%)

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+  + R +DA  +F EM         V +  +L+  A L R+E  +   ++ME  GI  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  ++  L+  + +  +      +  +M      P+++T+ +L+  +       +A  + 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
               ++G + +VV+Y+ LID LCKNG +  A+ LL+EM K+G+  +VVTYN+++     S
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
                         G+  ++A +        +D+ +  R+ N  +  F  L+     QG 
Sbjct: 225 --------------GRWSDAARML-------RDMMK--RSINPDVVTFTALIDVFVKQGN 261

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM---LLEELRLF 674
            +    QE+      +++M +  + PN VT+++I+N         DA     L+     F
Sbjct: 262 LDEA--QEL------YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313

Query: 675 DNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
            N V    + L+ G+ +  +  + + LF  +     +     YN L       G+ R A 
Sbjct: 314 PNVV--TYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371

Query: 734 LVVLEGKRRQVWENVWSESCLDLH 757
            +      R+V  ++ +  C+ LH
Sbjct: 372 DIFCWMVSRRVTPDIITH-CILLH 394


>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
          Length = 680

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 191/362 (52%), Gaps = 1/362 (0%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           +L + +I    + G    A  +   A   G         ++ISA   SG   EA ++F  
Sbjct: 241 QLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEE 300

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           +++  +KP    YNA++    K G   K    +  +M + GV PD  T++ L+      G
Sbjct: 301 LRQSGIKPRTRAYNALLKGYVKTG-PLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAG 359

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            WE+AR +  EM    +  + F ++ LL       +    F+++ EM +  + P+   Y+
Sbjct: 360 RWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYN 419

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +ID + K   LD A+  F  M   GI  DRV++NT++  + K GR   A  + + ME  
Sbjct: 420 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 479

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G    A TYN ++  YG Q ++D+++R+  +MK+  + PN++T++TL+DVY K G + +A
Sbjct: 480 GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDA 539

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           ++   E K  GLK    +Y+ALI+A  + GL E AV+    MT +G++P+++  NS+I+A
Sbjct: 540 IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINA 599

Query: 554 FG 555
           FG
Sbjct: 600 FG 601



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 196/410 (47%), Gaps = 40/410 (9%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNT 227
           G+ SKA+Q    A    +      K A+  ++IS L   G+   A+ +FE     G    
Sbjct: 254 GDPSKALQLLGMA----QATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPR 309

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV--------- 278
             A++AL+  Y ++G  ++A S+ + M++  + P+  TY+ +IDA    G          
Sbjct: 310 TRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLK 369

Query: 279 -------------------------DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
                                    +++   ++  +M   GV+PDR  +N ++    +  
Sbjct: 370 EMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFN 429

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             + A   F+ M+  GI+ D  T+NTL+D  CK  +  +A E+   M  +   P   TY+
Sbjct: 430 CLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYN 489

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            MI+ Y    R DD   +  +MK  GI  + V++ T++ +Y K GRF +A+   +EM+S 
Sbjct: 490 IMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSV 549

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G++  +  YNAL+  Y ++G  ++    F  M +D + P+LL  ++LI+ + +     EA
Sbjct: 550 GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEA 609

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             + +  K+ G+K DVV Y+ L+ AL +    +    + +EM   G +P+
Sbjct: 610 FAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 659



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 153/291 (52%), Gaps = 1/291 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           + FS L++ +   G  Q+   V   MK   +KP+   YN VID  GK      H +  FD
Sbjct: 381 FVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNC-LDHAMTTFD 439

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            ML  G++PDR+T+N+L+    + G    A  +F  M  RG      TYN ++++     
Sbjct: 440 RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 499

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           + D    ++ +M ++ I PNVVT++T++D Y K+GR +DA+    EMK +G+      YN
Sbjct: 500 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 559

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +++ YA+ G  E+A+   + M S G++   +  N+L+  +G+  +  E   + + MK +
Sbjct: 560 ALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKEN 619

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            V P+++TY+TL+    +   +++   ++ E   +G K D    S L  AL
Sbjct: 620 GVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 670



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 126/532 (23%), Positives = 226/532 (42%), Gaps = 96/532 (18%)

Query: 197 SAMISILGRLGKVDLAKNIFETA------LNEGYGNTVYAFSALISAYGRSGYCQE---- 246
           S ++  L R G V+LA +    +      LN    + V ++ A+ + Y  S         
Sbjct: 56  SPLLKFLSRFGPVELALDSESESEASPESLNPVEFDLVESYRAVPAPYWHSLIKSLTSST 115

Query: 247 -----AISVFNSMKRYNLKPNL-VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
                A +V + ++++NL  +  + Y+ +I A G+     + + E F    +  + P  +
Sbjct: 116 SSLGLAYAVVSWLQKHNLCFSYELLYSILIHALGRS----EKLYEAFLLSQKQTLTP--L 169

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD--------- 351
           T+N+L+  C+R    E A NL  +M   G   D   Y+ ++ ++ +  ++D         
Sbjct: 170 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 229

Query: 352 ----------------------------LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
                                        A +++    A  +S    T  ++I   A +G
Sbjct: 230 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 289

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           R  +A  +F E++  GI     +YN +L  Y K G  ++A  +  EME  G+  D  TY+
Sbjct: 290 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 349

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+  Y   G+++  R + ++M+A  V PN   +S L+  +   G +++  Q+ +E K  
Sbjct: 350 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 409

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGRSATT 560
           G+K D   Y+ +ID   K   ++ A++  D M  EGI P+ VT+N++ID     GR    
Sbjct: 410 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 469

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
           E   + +ER                   +       T N +I  +G        Q + ++
Sbjct: 470 EEMFEAMER-------------------RGCLPCATTYNIMINSYGD-------QERWDD 503

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             R     +LG   KM    I PNVVT + +++   +   F DA   LEE++
Sbjct: 504 MKR-----LLG---KMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 547



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 151/333 (45%), Gaps = 44/333 (13%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +LK+ E      + + F  LL    +RGEW K  Q     +K    K D+ +  + +I  
Sbjct: 367 VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLK-EMKSIGVKPDR-QFYNVVIDT 424

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
            G+   +D A   F+  L+EG                                   ++P+
Sbjct: 425 FGKFNCLDHAMTTFDRMLSEG-----------------------------------IEPD 449

Query: 263 LVTYNAVIDACGKGGVDFKHVV--EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
            VT+N +ID   K G   +H+V  E+F+ M R G  P   T+N ++        W+  + 
Sbjct: 450 RVTWNTLIDCHCKHG---RHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKR 506

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L  +M  +GI  ++ T+ TL+D   K  + + A E + EM +  + P+   Y+ +I+ YA
Sbjct: 507 LLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYA 566

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           + G  + A+N F  M   G+    ++ N++++ + +  R  EA  V + M+ +G++ D V
Sbjct: 567 QRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVV 626

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           TY  L+    +  K+ +V  ++E+M      P+
Sbjct: 627 TYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 659



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 122/311 (39%), Gaps = 69/311 (22%)

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
           C S  LL YS LI    +     EA  + ++     L      Y+ALI A  +N  +E A
Sbjct: 134 CFSYELL-YSILIHALGRSEKLYEAFLLSQKQTLTPLT-----YNALIGACARNNDIEKA 187

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV-----DDVERD------------- 570
           ++L+ +M ++G + + V Y+ +I +  RS   +  +      ++ERD             
Sbjct: 188 LNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDII 247

Query: 571 ---------------------LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
                                 G   ++A L ++ S     + ++GRT      +  + +
Sbjct: 248 MGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISA----LADSGRT------LEAEAL 297

Query: 610 AEKAGQGKKENRCRQEILCILG------------VFQKMHKLKIKPNVVTFSAILNACSR 657
            E+  Q   + R R     + G            +  +M K  + P+  T+S +++A   
Sbjct: 298 FEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVN 357

Query: 658 CNSFEDASMLLEELRLFDNQVYG-VAHGLLMGYRDN-IWVQALSLFDEVKLMDSSTASAF 715
              +E A ++L+E+   D Q    V   LL G+RD   W +   +  E+K +       F
Sbjct: 358 AGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF 417

Query: 716 YNALTDMLWHF 726
           YN + D    F
Sbjct: 418 YNVVIDTFGKF 428


>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 248/492 (50%), Gaps = 10/492 (2%)

Query: 95  DFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLC 154
           DF G+ S   V KM     K A   R  V   + L       + +  + D+L   + ++ 
Sbjct: 128 DFLGKTSKNRVKKMTKLALKRAKDWRQRV---QFLTDRILGLKSEEFVADVLDDRKVQMT 184

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
              D+ F+++ +G +  W +A++ + +   R     +   LA+ ++S+LG+  +  LA  
Sbjct: 185 -PTDFCFVVKWVG-QSSWQRALEVYEWLNLRHWYSPNARMLAT-ILSVLGKANQEALAVE 241

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           IF  A     GNTV  ++A++  Y R+G   +   + + M+    +P+LV++N +I+A  
Sbjct: 242 IFARA-EAAXGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARL 300

Query: 275 KGGVDFKHV-VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           K G    ++ +E+ +++ R+G+QPD IT+N+L++ CSR    E A  ++N+MV      D
Sbjct: 301 KSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPD 360

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++TYN ++    +      A  +  ++ +K   P+ VTY++++  +A+ G +D    +  
Sbjct: 361 LWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICE 420

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           +M  +G G D ++YNT++ +Y K G+ + A  +  +M+ SG   DAVTY  L+   GK  
Sbjct: 421 DMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKAN 480

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
              E   +  +M    V P L T+S LI  Y+K G   EA + F    ++G+K D + YS
Sbjct: 481 MIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYS 540

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            ++D L +      A+ L  EM     +P+   Y  ++   G+    E  V  V +D+ +
Sbjct: 541 VMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREE-DVHKVVKDM-E 598

Query: 574 QKESANLDAMCS 585
           +    N   +CS
Sbjct: 599 ELCGMNSQVICS 610



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 176/362 (48%), Gaps = 11/362 (3%)

Query: 202 ILGRLGKVDLAKNIFETALNE----GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           I  RL    +  N+    LNE    G    +  ++ LISA  R    +EA+ V+N M  +
Sbjct: 296 INARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAH 355

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             +P+L TYNA+I   G+ G+  +    +F D+   G  PD +T+NSLL   +R G  + 
Sbjct: 356 RCQPDLWTYNAMISVYGRCGMS-REAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDK 414

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
            + +  +MV  G  +D  TYNT++    K  Q DLAF++ ++M     SP+ VTY+ +ID
Sbjct: 415 VKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLID 474

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
              KA  + +A  + SEM    +     +++ ++  YAK G+  EA      M  SGI+ 
Sbjct: 475 SLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKP 534

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D + Y+ +L    +  +  +  +++++M      P+   Y  ++ V  K    ++  ++ 
Sbjct: 535 DHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVV 594

Query: 498 REFKQ-AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           ++ ++  G+ + V+  S L+   C     + A ++L     +G   +     SI+ ++G 
Sbjct: 595 KDMEELCGMNSQVIC-SILVKGEC----FDHAANMLRLAISQGCELDRENLLSILGSYGS 649

Query: 557 SA 558
           S 
Sbjct: 650 SG 651



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 149/692 (21%), Positives = 292/692 (42%), Gaps = 104/692 (15%)

Query: 246  EAISVFNSMKRYNLKPNLVTYNA-VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
            EA  +F+ M+ Y ++P+   Y + V+  C  G  +  H   + D     G+  D ++ ++
Sbjct: 726  EASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHY--LIDQAEEKGLLFDDVSIHT 783

Query: 305  -LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
             ++    +  LW+ A +L   +  +    D   +N L+ A       + A  I   M   
Sbjct: 784  GVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRD 843

Query: 364  NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
              SP V + + ++      GRLD+   +  E++ +G  + + S   +L  +A  G   E 
Sbjct: 844  GPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEV 903

Query: 424  LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
              + + M+++G       Y  ++G   K  +  +V  M  +M+     P+L  +++++ +
Sbjct: 904  KKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKL 963

Query: 484  YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            Y+  G +K+  Q+++  ++AGLK D   Y+ LI   C++   E  +SL+ EM + G+ P 
Sbjct: 964  YTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPK 1023

Query: 544  VVTYNSIIDAFGRSA-------------TTECTVD--------DVERDLGKQKESANLDA 582
            + TY S+I AFG+               + EC +D         + R+ G   ++  L  
Sbjct: 1024 LDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLG 1083

Query: 583  MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV---------- 632
            +       ++EAG      I     L+   +G G+ E    +++L  L V          
Sbjct: 1084 V-------MKEAGV--EPTIATMHLLMVSYSGSGQPEE--AEKVLDNLKVEGLPLSTLPY 1132

Query: 633  ----------------FQKMHKLK---IKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
                             QK+ ++K   ++P+   ++  + A S      +A +LL+ LR 
Sbjct: 1133 SSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALR- 1191

Query: 674  FDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
              +  + +   LL    D++  +  +  +++  ++ + A  F NAL D+LW F  +  A 
Sbjct: 1192 --DTGFDLPIRLLTEKSDSLVSEVDNCLEKLGPLEDNAAFNFVNALEDLLWAFELRATAS 1249

Query: 734  LVVLEGKRRQVW--------ENVWSESCLDLHLMSSGAARAMVHAWLLNIHS----IVF- 780
             V     +R ++        E  W     D   MS+G+A   +  WL ++ +     +F 
Sbjct: 1250 WVFQLAVKRSIYRHDVFRVAEKDWGA---DFRKMSAGSALVGLTLWLDHMQASFLITIFV 1306

Query: 781  ---------------EGHEL-PKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWV 824
                           +G+ L PK + ++TG  +++ V    +L   ++  L  MG+PF  
Sbjct: 1307 QLMEEYFYFWQDASLQGYPLSPKSVVLITGTAEYNMV----SLNSTLKAFLWEMGSPFLP 1362

Query: 825  ANCNLGRFISTGPMVASWLRESGTLKVLVLHD 856
                 G  ++    +  WL++S     L L D
Sbjct: 1363 CKTRSGLLVAKAHSLRMWLKDSSFCLDLELKD 1394



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/463 (22%), Positives = 191/463 (41%), Gaps = 104/463 (22%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS   R   ++ A  ++   +       ++ ++A+IS YGR G  +EA  +F  ++ 
Sbjct: 330 NTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLES 389

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+ VTYN+++ A  + G +   V EI +DM++ G   D +T+N+++ +  + G  +
Sbjct: 390 KGFLPDAVTYNSLLYAFAREG-NVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHD 448

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L+++M   G   D  TY  L+D++ K   +  A E+M+EM    + P + T+S +I
Sbjct: 449 LAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALI 508

Query: 377 DGYAKAGR--------------------------LD---------DALNMFSEMKFLGIG 401
            GYAKAG+                          LD          A+ ++ EM      
Sbjct: 509 CGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFK 568

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEME------------------------------ 431
            D   Y  +L +  K  R E+   V K+ME                              
Sbjct: 569 PDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGECFDHAANMLRLA 628

Query: 432 -SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT-------------- 476
            S G   D     ++LG YG  G++ E R + + ++      + L               
Sbjct: 629 ISQGCELDRENLLSILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQL 688

Query: 477 ----------------------YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
                                 Y +L+    +  L+ EA QIF + +  G++    LY +
Sbjct: 689 GDALREYGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRS 748

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIR-PNVVTYNSIIDAFGR 556
           ++   CK G  E+A  L+D+  ++G+   +V  +  +I+A+G+
Sbjct: 749 MVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGK 791



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 176/391 (45%), Gaps = 40/391 (10%)

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           T+L  + K  Q  LA EI A   A      V  Y+ M+  YA+ GR      +   M+  
Sbjct: 225 TILSVLGKANQEALAVEIFARAEAAX-GNTVQVYNAMMGVYARTGRFTKVQELLDLMRSR 283

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEE--ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
           G   D VS+NT+++   K G      A+ +  E+  SGI+ D +TYN L+    ++   +
Sbjct: 284 GCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLE 343

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E  +++  M A    P+L TY+ +I VY + G+ +EA ++F++ +  G   D V Y++L+
Sbjct: 344 EAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLL 403

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
            A  + G V+    + ++M K G   + +TYN+II  +G+           + DL  Q  
Sbjct: 404 YAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRG---------QHDLAFQLY 454

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
           S            D++ +GR+ + +      ++ +  G+        +       V  +M
Sbjct: 455 S------------DMKLSGRSPDAVTYT---VLIDSLGKANMIKEAAE-------VMSEM 492

Query: 637 HKLKIKPNVVTFSAIL----NACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDN 692
               +KP + TFSA++     A  R  + E    +L      D+  Y V   +L+ + ++
Sbjct: 493 LNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNES 552

Query: 693 IWVQALSLFDEVKLMDSSTASAFYNALTDML 723
              +A+ L+ E+ L       A Y  +  +L
Sbjct: 553 --GKAMKLYQEMVLHSFKPDHALYEVMLRVL 581



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 181/408 (44%), Gaps = 7/408 (1%)

Query: 194  KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
            K+ +A+I      G  + A+ IF T + +G   TV + + L+ A    G   E   V   
Sbjct: 815  KVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQE 874

Query: 254  MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            ++    K +  +   ++DA    G  F+ V +I+  M   G  P    +  ++ + ++G 
Sbjct: 875  LQDMGFKISKSSITLMLDAFAHAGNIFE-VKKIYQGMKAAGYFPTMHLYRIMIGLLAKGK 933

Query: 314  LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
                   + +EM       D+  +N++L             ++   +    + P+  TY+
Sbjct: 934  RVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYN 993

Query: 374  TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            T+I  Y +  R ++ L++  EM+ +G+     +Y +++S + KL   E+A  + + + S 
Sbjct: 994  TLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSK 1053

Query: 434  GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
              + D   Y+ ++  +   G + +  ++   MK   V P + T   L+  YS  G  +EA
Sbjct: 1054 ECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEA 1113

Query: 494  MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             ++    K  GL    + YS++IDA  KNG    A+  L EM K+G+ P+   +   + A
Sbjct: 1114 EKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRA 1173

Query: 554  FGRSA-TTECTV-----DDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
               S  T+E  V      D   DL  +  +   D++ S+ D  +++ G
Sbjct: 1174 ASLSQHTSEAIVLLKALRDTGFDLPIRLLTEKSDSLVSEVDNCLEKLG 1221


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 211/418 (50%), Gaps = 3/418 (0%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
           A  +T L+R L   G+  +A+  F   +    + N        +I+ L ++G    A  +
Sbjct: 140 ATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVT--YGTLINGLCKVGNTSAAIRL 197

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
             +         V  FS LI +  +     EA ++F+ M    + PN+VTYN++I    K
Sbjct: 198 LRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK 257

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
              ++KHV  + ++M+ + + PD  T N+++    + G+   A ++ + M+HRG++ ++ 
Sbjct: 258 L-CEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVV 316

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYN L+D  C   ++D+A ++   M  K+   NV++Y+T+I+GY K   +D A+ +F EM
Sbjct: 317 TYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEM 376

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
               +  + V+YNT++     +GR ++A+ +  EM + G   D VTY  L     K    
Sbjct: 377 SRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHL 436

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D+   + + ++     P++  Y+T++D   + G  ++A  +F      GL+ +V  Y+ +
Sbjct: 437 DKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIM 496

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           I  LCK GL+  A  L  EM K G  PN  TYN I   F R+     T++ +E  L +
Sbjct: 497 IHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 554



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 193/396 (48%), Gaps = 34/396 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L  L +VD A +     L  G+      F+ LI      G   EA+ +F+ M  
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 257 YNLKPNLVTYNAVIDACGKGG---------------------VDFKHVVE---------- 285
              +PN+VTY  +I+   K G                     V F  +++          
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228

Query: 286 ---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
              IF +M+  G+ P+ +T+NSL+    +   W+    L NEMV   I  D+FT NT++D
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A+CK   +  A +++  M  + + PNVVTY+ ++DG+     +D A+ +F  M       
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           + +SYNT+++ Y K+   ++A+ + +EM    +  + VTYN L+ G    G+  +   +F
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +M A    P+L+TY TL D   K     +AM + +  + +    D+ +Y+ ++D +C+ 
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           G +E A  L   ++ +G++PNV TYN +I    +  
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQG 504



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 197/397 (49%), Gaps = 11/397 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKVDLAKNIF 216
           Y  L+  L   G  S AI+     ++  E+ N Q  +   S +I  L +  +V  A NIF
Sbjct: 178 YGTLINGLCKVGNTSAAIR----LLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIF 233

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
              + +G    +  +++LI    +    +   ++ N M    + P++ T N V+DA C +
Sbjct: 234 SEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKE 293

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           G V   H  ++ D M+  GV+P+ +T+N+L+   C R  + + A  +F+ MVH+    ++
Sbjct: 294 GMVAEAH--DVVDMMIHRGVEPNVVTYNALMDGHCLRNEV-DVAVKVFDTMVHKDCVANV 350

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            +YNTL++  CK   +D A  +  EM  + ++PN VTY+T+I G    GRL DA+++F E
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G   D V+Y T+     K    ++A+ + K +E S    D   Y  +L G  + G+
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            ++ R +F  + +  + PN+ TY+ +I    K GL  EA ++F E  + G   +   Y+ 
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +     +N      + LL+EM   G   +V T   ++
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 567



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 232/526 (44%), Gaps = 58/526 (11%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           +D A + F   L++    +   F+ L+++  ++ +    +S+   M  + + P++ T   
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           VI++ C    VDF         +L+ G QPD  TF +L+  +C  G + EA  +LF++M+
Sbjct: 111 VINSLCHLNRVDF--AFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEAL-HLFDKMI 167

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G   ++ TY TL++ +CK      A  ++  M   N  PNVV +ST+ID   K  ++ 
Sbjct: 168 GEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A N+FSEM   GI  + V+YN+++    KL  ++    +  EM  S I  D  T N ++
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 287

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
               K+G   E   + + M    V PN++TY+ L+D +        A+++F         
Sbjct: 288 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 347

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
           A+V+ Y+ LI+  CK   V+ A+ L +EM+++ + PN VTYN++I          C V  
Sbjct: 348 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL-------CHV-- 398

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
                                       GR  +  I +F ++VA          R   + 
Sbjct: 399 ----------------------------GRLQDA-ISLFHEMVARGQIPDLVTYRTLSDY 429

Query: 627 LC-------ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQ-- 677
           LC        + + + +      P++  ++ IL+   R    EDA  L   L     Q  
Sbjct: 430 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 489

Query: 678 --VYGVA-HGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALT 720
              Y +  HGL    +  +  +A  LF E+     S     YN +T
Sbjct: 490 VWTYNIMIHGLC---KQGLLAEASKLFSEMNKNGCSPNDCTYNLIT 532



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 157/303 (51%), Gaps = 5/303 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++  L + G V  A ++ +  ++ G    V  ++AL+  +        A+ VF++M  
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
            +   N+++YN +I+  C    VD    + +F++M R  + P+ +T+N+L+  +C  G L
Sbjct: 344 KDCVANVISYNTLINGYCKIQSVD--KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 401

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +A  +LF+EMV RG   D+ TY TL D +CK   +D A  ++  +   N  P++  Y+T
Sbjct: 402 QDAI-SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 460

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++DG  +AG L+DA ++FS +   G+  +  +YN ++    K G   EA  +  EM  +G
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              +  TYN +  G+ +  +      + E+M A   S ++ T + L+ + S  GL +   
Sbjct: 521 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVK 580

Query: 495 QIF 497
           QI 
Sbjct: 581 QIL 583



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 148/306 (48%), Gaps = 3/306 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V+  + ++ A  + G   EA  V + M    ++PN+VTYNA++D  C +  VD    V++
Sbjct: 280 VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV--AVKV 337

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           FD M+      + I++N+L+    +    + A  LF EM  + +  +  TYNTL+  +C 
Sbjct: 338 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 397

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A  +  EM A+   P++VTY T+ D   K   LD A+ +   ++      D   
Sbjct: 398 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 457

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T+L    + G  E+A  +   + S G++ +  TYN ++ G  KQG   E  ++F +M 
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            +  SPN  TY+ +   + +       +++  E    G   DV   + L+  L  +GL +
Sbjct: 518 KNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQ 577

Query: 527 SAVSLL 532
           S   +L
Sbjct: 578 SVKQIL 583



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 197/450 (43%), Gaps = 24/450 (5%)

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A + FN M+H+        +N LL +I K         +  +M +  I P+V T + +
Sbjct: 52  DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 111

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+      R+D A +  +++  LG   D  ++ T++      G+  EAL +  +M   G 
Sbjct: 112 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 171

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + VTY  L+ G  K G      R+   M+     PN++ +STLID   K     EA  
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFN 231

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           IF E    G+  ++V Y++LI  LCK    +   +L++EM    I P+V T N+++DA  
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291

Query: 556 RSATTECTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
           +        D V+  + +  E      +A +D  C +++ DV          +KVF  +V
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA---------VKVFDTMV 342

Query: 610 AEK------AGQGKKENRCR-QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
            +       +        C+ Q +   + +F++M + ++ PN VT++ +++        +
Sbjct: 343 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 402

Query: 663 DASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASAFYNALT 720
           DA  L  E+         V +  L  Y  ++    +A++L   ++  +       Y  + 
Sbjct: 403 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462

Query: 721 DMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
           D +   G+   A+ +      + +  NVW+
Sbjct: 463 DGMCRAGELEDARDLFSNLSSKGLQPNVWT 492



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 83/377 (22%), Positives = 150/377 (39%), Gaps = 59/377 (15%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           S+NT  S        +EAL     M         V +N LL    K   +  +  +  QM
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
            +  + P++ T + +I+          A     +  + G + D   ++ LI  LC  G +
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN------ 579
             A+ L D+M  EG +PNVVTY ++I+   +   T   +  + R + +     N      
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAI-RLLRSMEQGNCQPNVVVFST 215

Query: 580 -LDAMCSQDDKDVQEAGRTDNQII----------------------------KVFGQLVA 610
            +D++C   D+ V EA    +++I                             +  ++V 
Sbjct: 216 LIDSLCK--DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD 273

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKL-------KIKPNVVTFSAILNACSRCNSFED 663
            K            + LC  G+  + H +        ++PNVVT++A+++     N  + 
Sbjct: 274 SKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV 333

Query: 664 ASMLLEELRLFDNQVYG--VA-----HGLLMGYRDNIWV-QALSLFDEVKLMDSSTASAF 715
           A      +++FD  V+   VA     + L+ GY     V +A+ LF+E+   + +  +  
Sbjct: 334 A------VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387

Query: 716 YNALTDMLWHFGQKRGA 732
           YN L   L H G+ + A
Sbjct: 388 YNTLIHGLCHVGRLQDA 404


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 207/387 (53%), Gaps = 2/387 (0%)

Query: 171 EWSKAIQCF-AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
           E  +A + F  F + +E+    + +  + M+S+  +L ++++A  ++         +TVY
Sbjct: 169 ELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVY 228

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            F+ +++   + G  ++A      M+    KPN+V+YN +I      G + +    I D 
Sbjct: 229 TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG-NIEGARRILDA 287

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G++PD  T+ SL++   + G  E A  LF++MV  G+  +  TYNTL+D  C    
Sbjct: 288 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 347

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++ AF    EM  K I P+V TY+ ++      GR+ +A +M  EM+  GI  D ++YN 
Sbjct: 348 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 407

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +++ Y++ G  ++A  +  EM S GI    VTY +L+    ++ +  E   +FE++    
Sbjct: 408 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 467

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           VSP+++ ++ ++D +   G  + A  + +E  +  +  D V ++ L+   C+ G VE A 
Sbjct: 468 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 527

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            LLDEM + GI+P+ ++YN++I  +GR
Sbjct: 528 MLLDEMKRRGIKPDHISYNTLISGYGR 554



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 186/354 (52%), Gaps = 3/354 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++ A+ I +    +G     Y + +LIS   + G  +EA  +F+ M    L PN VTY
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +ID  C KG  D +      D+M++ G+ P   T+N L+      G    A ++  EM
Sbjct: 336 NTLIDGYCNKG--DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 393

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             +GI  D  TYN L++   +      AF++  EM +K I P  VTY+++I   ++  R+
Sbjct: 394 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 453

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            +A ++F ++   G+  D + +N ++  +   G  E A ++ KEM+   +  D VT+N L
Sbjct: 454 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 513

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  ++GK +E R + ++MK   + P+ ++Y+TLI  Y + G  K+A ++  E    G 
Sbjct: 514 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 573

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
              ++ Y+ALI  LCKN   + A  LL EM  +GI P+  TY S+I+  G   T
Sbjct: 574 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDT 627



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 225/476 (47%), Gaps = 38/476 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++ +   L + D A   F     +G    +   + ++S + +    + A  ++  M R  
Sbjct: 163 LVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLR 222

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           +   + T+N +++   K G   K   E    M   G +P+ +++N+++   S  G  E A
Sbjct: 223 ISSTVYTFNIMVNVLCKEG-KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGA 281

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           R + + M  +GI+ D +TY +L+  +CK  +++ A  +  +M    + PN VTY+T+IDG
Sbjct: 282 RRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDG 341

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y   G L+ A +   EM   GI     +YN ++      GR  EA  + KEM   GI  D
Sbjct: 342 YCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 401

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           A+TYN L+ GY + G   +   +  +M +  + P  +TY++LI V S+    KEA  +F 
Sbjct: 402 AITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFE 461

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +    G+  DV++++A++D  C NG VE A  LL EM ++ + P+ VT+N+++    R  
Sbjct: 462 KILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG 521

Query: 559 TTE---CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
             E     +D+++R                   + ++    + N +I  +G     + G 
Sbjct: 522 KVEEARMLLDEMKR-------------------RGIKPDHISYNTLISGYG-----RRGD 557

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            K   R R E+L I             P ++T++A++    +    + A  LL+E+
Sbjct: 558 IKDAFRVRDEMLSI----------GFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 603



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 212/462 (45%), Gaps = 37/462 (8%)

Query: 285 EIFDDMLRNGVQPDR------ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           E+FD++    +  DR      I F+ L+ VC      + A   F  M  +GI   I T N
Sbjct: 140 ELFDEL---TLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCN 196

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            +L    K  +M++A+ + AEM    IS  V T++ M++   K G+L  A      M+ L
Sbjct: 197 DMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGL 256

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   + VSYNT++  Y+  G  E A  +   M   GI  D+ TY +L+ G  K+G+ +E 
Sbjct: 257 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 316

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +F++M    + PN +TY+TLID Y   G  + A     E  + G+   V  Y+ L+ A
Sbjct: 317 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 376

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
           L   G +  A  ++ EM K+GI P+ +TYN +I+ + R    +   D     L K  E  
Sbjct: 377 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 436

Query: 579 NL------------DAMCSQDD--KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
           ++            + M   DD  + + + G + + I+  F  +V      G  E     
Sbjct: 437 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM--FNAMVDGHCANGNVER---- 490

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG 684
                  + ++M +  + P+ VTF+ ++    R    E+A MLL+E++    +   +++ 
Sbjct: 491 ----AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYN 546

Query: 685 LLM---GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
            L+   G R +I   A  + DE+  +  +     YNAL   L
Sbjct: 547 TLISGYGRRGDIK-DAFRVRDEMLSIGFNPTLLTYNALIKCL 587



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 108/190 (56%), Gaps = 3/190 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I +L R  ++  A ++FE  L++G    V  F+A++  +  +G  + A  +   M R
Sbjct: 441 TSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDR 500

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            ++ P+ VT+N ++   C +G V+   +  + D+M R G++PD I++N+L++   R G  
Sbjct: 501 KSVPPDEVTFNTLMQGRCREGKVEEARM--LLDEMKRRGIKPDHISYNTLISGYGRRGDI 558

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  + +EM+  G +  + TYN L+  +CK  + DLA E++ EM  K ISP+  TY ++
Sbjct: 559 KDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 618

Query: 376 IDGYAKAGRL 385
           I+G      L
Sbjct: 619 IEGMGNVDTL 628


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 211/418 (50%), Gaps = 3/418 (0%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
           A  +T L+R L   G+  +A+  F   +    + N        +I+ L ++G    A  +
Sbjct: 140 ATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVT--YGTLINGLCKVGNTSAAIRL 197

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
             +         V  FS LI +  +     EA ++F+ M    + PN+VTYN++I    K
Sbjct: 198 LRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK 257

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
              ++KHV  + ++M+ + + PD  T N+++    + G+   A ++ + M+HRG++ ++ 
Sbjct: 258 L-CEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVV 316

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYN L+D  C   ++D+A ++   M  K+   NV++Y+T+I+GY K   +D A+ +F EM
Sbjct: 317 TYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEM 376

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
               +  + V+YNT++     +GR ++A+ +  EM + G   D VTY  L     K    
Sbjct: 377 SRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHL 436

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D+   + + ++     P++  Y+T++D   + G  ++A  +F      GL+ +V  Y+ +
Sbjct: 437 DKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIM 496

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           I  LCK GL+  A  L  EM K G  PN  TYN I   F R+     T++ +E  L +
Sbjct: 497 IHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 554



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 193/394 (48%), Gaps = 34/394 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L  L +VD A +     L  G+      F+ LI      G   EA+ +F+ M  
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 257 YNLKPNLVTYNAVIDACGKGG---------------------VDFKHVVE---------- 285
              +PN+VTY  +I+   K G                     V F  +++          
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228

Query: 286 ---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
              IF +M+  G+ P+ +T+NSL+    +   W+    L NEMV   I  D+FT NT++D
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A+CK   +  A +++  M  + + PNVVTY+ ++DG+     +D A+ +F  M       
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           + +SYNT+++ Y K+   ++A+ + +EM    +  + VTYN L+ G    G+  +   +F
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +M A    P+L+TY TL D   K     +AM + +  + +    D+ +Y+ ++D +C+ 
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           G +E A  L   ++ +G++PNV TYN +I    +
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCK 502



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 197/397 (49%), Gaps = 11/397 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKVDLAKNIF 216
           Y  L+  L   G  S AI+     ++  E+ N Q  +   S +I  L +  +V  A NIF
Sbjct: 178 YGTLINGLCKVGNTSAAIR----LLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIF 233

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
              + +G    +  +++LI    +    +   ++ N M    + P++ T N V+DA C +
Sbjct: 234 SEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKE 293

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           G V   H  ++ D M+  GV+P+ +T+N+L+   C R  + + A  +F+ MVH+    ++
Sbjct: 294 GMVAEAH--DVVDMMIHRGVEPNVVTYNALMDGHCLRNEV-DVAVKVFDTMVHKDCVANV 350

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            +YNTL++  CK   +D A  +  EM  + ++PN VTY+T+I G    GRL DA+++F E
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G   D V+Y T+     K    ++A+ + K +E S    D   Y  +L G  + G+
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            ++ R +F  + +  + PN+ TY+ +I    K GL  EA ++F E  + G   +   Y+ 
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +     +N      + LL+EM   G   +V T   ++
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 567



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 134/526 (25%), Positives = 234/526 (44%), Gaps = 58/526 (11%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           +D A + F   L++    +   F+ L+++  ++ +    +S+   M  + + P++ T   
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           VI++ C    VDF         +L+ G QPD  TF +L+  +C  G + EA  +LF++M+
Sbjct: 111 VINSLCHLNRVDF--AFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEAL-HLFDKMI 167

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G   ++ TY TL++ +CK      A  ++  M   N  PNVV +ST+ID   K  ++ 
Sbjct: 168 GEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A N+FSEM   GI  + V+YN+++    KL  ++    +  EM  S I  D  T N ++
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 287

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
               K+G   E   + + M    V PN++TY+ L+D +        A+++F         
Sbjct: 288 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 347

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
           A+V+ Y+ LI+  CK   V+ A+ L +EM+++ + PN VTYN++I          C V  
Sbjct: 348 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL-------CHV-- 398

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
                G+ +++                        I +F ++VA          R   + 
Sbjct: 399 -----GRLQDA------------------------ISLFHEMVARGQIPDLVTYRTLSDY 429

Query: 627 LC-------ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQ-- 677
           LC        + + + +      P++  ++ IL+   R    EDA  L   L     Q  
Sbjct: 430 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 489

Query: 678 --VYGVA-HGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALT 720
              Y +  HGL    +  +  +A  LF E+     S     YN +T
Sbjct: 490 VWTYNIMIHGLC---KQGLLAEASKLFSEMNKNGCSPNDCTYNLIT 532



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 160/308 (51%), Gaps = 5/308 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++  L + G V  A ++ +  ++ G    V  ++AL+  +        A+ VF++M  
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
            +   N+++YN +I+  C    VD    + +F++M R  + P+ +T+N+L+  +C  G L
Sbjct: 344 KDCVANVISYNTLINGYCKIQSVD--KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 401

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +A  +LF+EMV RG   D+ TY TL D +CK   +D A  ++  +   N  P++  Y+T
Sbjct: 402 QDAI-SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 460

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++DG  +AG L+DA ++FS +   G+  +  +YN ++    K G   EA  +  EM  +G
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              +  TYN +  G+ +  +      + E+M A   S ++ T + L+ + S  GL +   
Sbjct: 521 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVK 580

Query: 495 QIFREFKQ 502
           QI  ++ Q
Sbjct: 581 QILCKYVQ 588



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 197/450 (43%), Gaps = 24/450 (5%)

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A + FN M+H+        +N LL +I K         +  +M +  I P+V T + +
Sbjct: 52  DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 111

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+      R+D A +  +++  LG   D  ++ T++      G+  EAL +  +M   G 
Sbjct: 112 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 171

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + VTY  L+ G  K G      R+   M+     PN++ +STLID   K     EA  
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFN 231

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           IF E    G+  ++V Y++LI  LCK    +   +L++EM    I P+V T N+++DA  
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291

Query: 556 RSATTECTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
           +        D V+  + +  E      +A +D  C +++ DV          +KVF  +V
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA---------VKVFDTMV 342

Query: 610 AEK------AGQGKKENRCR-QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
            +       +        C+ Q +   + +F++M + ++ PN VT++ +++        +
Sbjct: 343 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 402

Query: 663 DASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASAFYNALT 720
           DA  L  E+         V +  L  Y  ++    +A++L   ++  +       Y  + 
Sbjct: 403 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462

Query: 721 DMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
           D +   G+   A+ +      + +  NVW+
Sbjct: 463 DGMCRAGELEDARDLFSNLSSKGLQPNVWT 492



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 148/306 (48%), Gaps = 3/306 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V+  + ++ A  + G   EA  V + M    ++PN+VTYNA++D  C +  VD    V++
Sbjct: 280 VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV--AVKV 337

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           FD M+      + I++N+L+    +    + A  LF EM  + +  +  TYNTL+  +C 
Sbjct: 338 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 397

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A  +  EM A+   P++VTY T+ D   K   LD A+ +   ++      D   
Sbjct: 398 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 457

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T+L    + G  E+A  +   + S G++ +  TYN ++ G  KQG   E  ++F +M 
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            +  SPN  TY+ +   + +       +++  E    G   DV   + L+  L  +GL +
Sbjct: 518 KNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQ 577

Query: 527 SAVSLL 532
           S   +L
Sbjct: 578 SVKQIL 583



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/377 (22%), Positives = 150/377 (39%), Gaps = 59/377 (15%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           S+NT  S        +EAL     M         V +N LL    K   +  +  +  QM
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
            +  + P++ T + +I+          A     +  + G + D   ++ LI  LC  G +
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN------ 579
             A+ L D+M  EG +PNVVTY ++I+   +   T   +  + R + +     N      
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAI-RLLRSMEQGNCQPNVVVFST 215

Query: 580 -LDAMCSQDDKDVQEA----------GRTDN------------------QIIKVFGQLVA 610
            +D++C   D+ V EA          G + N                   +  +  ++V 
Sbjct: 216 LIDSLCK--DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD 273

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKL-------KIKPNVVTFSAILNACSRCNSFED 663
            K            + LC  G+  + H +        ++PNVVT++A+++     N  + 
Sbjct: 274 SKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV 333

Query: 664 ASMLLEELRLFDNQVYG--VA-----HGLLMGYRDNIWV-QALSLFDEVKLMDSSTASAF 715
           A      +++FD  V+   VA     + L+ GY     V +A+ LF+E+   + +  +  
Sbjct: 334 A------VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387

Query: 716 YNALTDMLWHFGQKRGA 732
           YN L   L H G+ + A
Sbjct: 388 YNTLIHGLCHVGRLQDA 404


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 193/348 (55%), Gaps = 7/348 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A ++F+  ++EG+   V  +  LI+   + G    AI +  SM++ N +P++V Y
Sbjct: 149 GKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIY 208

Query: 267 NAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            ++ID+  K     + V E   +F  M+  G+ PD  T+ SL+        W+    L N
Sbjct: 209 TSIIDSLCKD----RQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLN 264

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           +MV+  I  D+  ++T++DA+CK  ++  A EI+  M  + + P+VVTY+T++DG+    
Sbjct: 265 QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQS 324

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            +D+A+ +F  M   G   D +SY T+++ Y K+ + ++A+ + +EM       D  TYN
Sbjct: 325 EMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYN 384

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+ G    G+  +   +F +M A    P+L+TYS L+D   K    +EAM + +  + +
Sbjct: 385 TLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEAS 444

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            L  D+ +Y+ +ID +C+ G +E+A  L   ++ +G+ P+V TYN +I
Sbjct: 445 NLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 492



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 181/367 (49%), Gaps = 1/367 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+    L +V  A ++    L  G+      F+ LI      G   EA+ +F+ M    
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +PN+VTY  +I+   K G +    + +   M +   QPD + + S++    +      A
Sbjct: 166 FQPNVVTYGTLINGLCKVG-NTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 224

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            NLF++MV +GI  DIFTY +L+ A+C   +      ++ +M    I P+VV +ST++D 
Sbjct: 225 FNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 284

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K G++ +A  +   M   G+  D V+Y T++  +      +EA+ V   M   G   D
Sbjct: 285 LCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPD 344

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            ++Y  L+ GY K  K D+   +FE+M      P+  TY+TL+      G  ++A+ +F 
Sbjct: 345 VISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFH 404

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E    G   D+V YS L+D+LCKN  +E A++LL  +    + P++  YN IID   R+ 
Sbjct: 405 EMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAG 464

Query: 559 TTECTVD 565
             E   D
Sbjct: 465 ELEAARD 471



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 179/348 (51%), Gaps = 5/348 (1%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + +++I  L +  +V  A N+F   + +G    ++ +++L+ A       +   ++ N M
Sbjct: 207 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM 266

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
               + P++V ++ V+DA C +G V   H  EI D M++ GV+PD +T+ +L+   C + 
Sbjct: 267 VNSKILPDVVIFSTVVDALCKEGKVTEAH--EIVDMMIQRGVEPDVVTYTTLMDGHCLQS 324

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            + EA + +F+ MV +G   D+ +Y TL++  CK  ++D A  +  EM  K   P+  TY
Sbjct: 325 EMDEAVK-VFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTY 383

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T++ G    GRL DA+ +F EM   G   D V+Y+ +L    K    EEA+ + K +E+
Sbjct: 384 NTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEA 443

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           S +  D   YN ++ G  + G+ +  R +F  + +  + P++ TY+ +I    K GL  E
Sbjct: 444 SNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNE 503

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           A ++F E        D   Y+ +     +N     A+ LL+EM   G 
Sbjct: 504 ANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 139/267 (52%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F+ +L     P  + F  LL   ++   +    +L  +M   G+  +++T N L+++ C 
Sbjct: 53  FNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCH 112

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  AF ++A++      P+  T++T+I G    G++ +AL++F +M   G   + V+
Sbjct: 113 LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 172

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T+++   K+G    A+ + + ME    + D V Y +++    K  +  E   +F QM 
Sbjct: 173 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 232

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              +SP++ TY++L+        +K    +  +   + +  DVV++S ++DALCK G V 
Sbjct: 233 GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVT 292

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            A  ++D M + G+ P+VVTY +++D 
Sbjct: 293 EAHEIVDMMIQRGVEPDVVTYTTLMDG 319



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 140/282 (49%), Gaps = 3/282 (1%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V  FS ++ A  + G   EA  + + M +  ++P++VTY  ++D  C +  +D    V++
Sbjct: 275 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMD--EAVKV 332

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           FD M+R G  PD I++ +L+    +    + A  LF EM  +    D  TYNTL+  +C 
Sbjct: 333 FDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCH 392

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A  +  EM A+   P++VTYS ++D   K   L++A+ +   ++   +  D   
Sbjct: 393 VGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQV 452

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN ++    + G  E A  +   + S G+     TYN ++ G  K+G  +E  ++F +M 
Sbjct: 453 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMD 512

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            +  SP+  TY+T+   + +      A+Q+  E    G  AD
Sbjct: 513 GNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/418 (21%), Positives = 174/418 (41%), Gaps = 61/418 (14%)

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           FN ++H      I  +  LL +I K         +  +M +  + PNV T + +I+ +  
Sbjct: 53  FNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCH 112

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
             R+  A ++ +++  LG   D  ++ T++      G+  EAL +  +M   G + + VT
Sbjct: 113 LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 172

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  L+ G  K G      R+   M+     P+++ Y+++ID   K     EA  +F +  
Sbjct: 173 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 232

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G+  D+  Y++L+ ALC     +   +LL++M    I P+VV +++++DA  +     
Sbjct: 233 GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVT 292

Query: 562 CTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
              + V+  + +  E      +  +D  C Q + D         + +KVF  +V      
Sbjct: 293 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMD---------EAVKVFDMMV------ 337

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL---- 671
                                 +    P+V++++ ++N   + +  + A  L EE+    
Sbjct: 338 ----------------------RKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 375

Query: 672 -----RLFDNQVYGVAH-GLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
                + ++  +YG+ H G L          A++LF E+           Y+ L D L
Sbjct: 376 WIPDTKTYNTLMYGLCHVGRLQ--------DAIALFHEMVARGQMPDLVTYSILLDSL 425



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 116/232 (50%), Gaps = 1/232 (0%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           ++D A  +F+  + +G+   V +++ LI+ Y +     +A+ +F  M R    P+  TYN
Sbjct: 325 EMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYN 384

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            ++      G   +  + +F +M+  G  PD +T++ LL    +    E A  L   +  
Sbjct: 385 TLMYGLCHVG-RLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEA 443

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
             ++ DI  YN ++D +C+  +++ A ++ + + +K + P+V TY+ MI G  K G L++
Sbjct: 444 SNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNE 503

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
           A  +F EM       D  +YNT+   + +      A+ + +EM + G   D+
Sbjct: 504 ANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555


>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
 gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
          Length = 1365

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 206/398 (51%), Gaps = 5/398 (1%)

Query: 158 DYTFLLRELGNRGEWSKAIQCF-AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF 216
           D  ++++ + N   W +A++ +    V R    N   ++ + M+S+LGR  +  LA+ +F
Sbjct: 58  DLCYVVKRVANTS-WQRALELYECLNVARWYAPNP--RMLAVMLSVLGRANQPGLAQELF 114

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           + A     GN V  +++L+S Y R G       +   M+    +P+LVT+N VI A  +G
Sbjct: 115 DRA-ESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRG 173

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G+       +  D+   G++PD IT+N+L++ CS       A  +F EM  +G D DI+T
Sbjct: 174 GMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWT 233

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN ++    +  +++ A  I   M  +  +P+ VTY++++  +A+ GR+++   +   M+
Sbjct: 234 YNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMR 293

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
                 D ++YNT++ +Y K G   +A  +  +M+  G   D+VT+  L+   GK G  +
Sbjct: 294 DARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVN 353

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E   MFE M    V P L  +S +I  Y+K  ++ +A   +    +AG++ D++ YS ++
Sbjct: 354 EAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVML 413

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           D   K G+ E  + L   M   G++P +  Y  ++  F
Sbjct: 414 DVFFKAGMPEKCIILYKAMVGSGLKPELSVYAIMVRVF 451



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 159/673 (23%), Positives = 282/673 (41%), Gaps = 83/673 (12%)

Query: 197  SAM-ISILGRLGKVDLAKN---IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
            SAM ++I+   GK+ L +N   +F      G+     A+SAL+SAY  +G  + A    +
Sbjct: 646  SAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALD 705

Query: 253  SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            +M    L+PN    N V++A G+ G   K + E F  +   G+ P+  TF  +    SR 
Sbjct: 706  NMVAAGLQPNATCANYVLEAFGRAG-KAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRN 764

Query: 313  GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            G  E AR+++ +M   G                                    SP++  +
Sbjct: 765  GNLEEARSMYRQMKEAGF-----------------------------------SPSIQVF 789

Query: 373  STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
              ++  Y++     DA  +  ++K  G+ LD   YN ++S+Y+KLG +  A LV K M+ 
Sbjct: 790  KALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQE 849

Query: 433  SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             G   DA T+N L+  Y +     E + +  +M     +PN+ TY+TLI  Y +   Y++
Sbjct: 850  IGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYED 909

Query: 493  AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            A  +F+   + G K D   Y+ +I+   K G       ++++M  +G  P++ T + ++D
Sbjct: 910  AELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMD 969

Query: 553  AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
            ++G+   T           GK +E            + + E G + + I   +  ++   
Sbjct: 970  SYGKGGAT-----------GKAEEVL----------ETLPEIGMSPDAI--HYTSIINSH 1006

Query: 613  AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                       ++ L  +   +KM    ++P  VT +  + A S C     A MLL+ L 
Sbjct: 1007 LNN--------KDYLSAVIWLRKMTDACVRPTHVTITCFVGAASVCERSSHALMLLKAL- 1057

Query: 673  LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
                  + +   L+      +      +FD+++           N L D+LW F Q   A
Sbjct: 1058 --SEAGFSLPLRLMTECTPKVVQDMQDIFDQLQESGPEACQGVVNVLMDLLWAFRQCATA 1115

Query: 733  QLVVLEGKRRQVWENVWSES-----CLDLHLMSSGAARAMVHAWLLNIHSIVFEGHEL-P 786
             LV        ++  V +         D   +S GA+   +  WL  +     +G  + P
Sbjct: 1116 ALVFAVAIESNIYTQVLARVKDRNWGADFRRLSPGASLVALILWLDQMQDASLQGSPVPP 1175

Query: 787  KLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRES 846
            K + I  G    SK+    ++R  ++  L  MG+PF  +    G  ++    +  WL+ES
Sbjct: 1176 KSIQIDIG---SSKLNNQASVRNTIKAHLWQMGSPFLPSKTRAGVLVAKSHALCMWLKES 1232

Query: 847  GTLKVLVLHDDRT 859
                 L L + +T
Sbjct: 1233 PYCLDLELKNTKT 1245



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 158/708 (22%), Positives = 286/708 (40%), Gaps = 103/708 (14%)

Query: 119 TRHSVVAEEALHHVTAFARDD--VSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSK 174
           T  +V     LH   AFARD     +  I        C +D+ T+  ++   G  G   K
Sbjct: 263 TPDAVTYNSVLH---AFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRK 319

Query: 175 AIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSAL 234
           A + +   +K E R  D     + +I  LG+ G V+ A  +FE  L      T+ AFSA+
Sbjct: 320 AEELYV-QMKEEGRCPDSVTF-TVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAM 377

Query: 235 ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG 294
           I AY ++    +A   ++ M R  ++P+L+ Y+ ++D   K G+  K ++ ++  M+ +G
Sbjct: 378 ICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCII-LYKAMVGSG 436

Query: 295 VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAF 354
           ++P+   +  ++ V  +        NL  EMV     Q   +   L   + KG     A 
Sbjct: 437 LKPELSVYAIMVRVFYQKSSVAEIENLSKEMV-----QSSASLAALSSTLAKGGFYAEAA 491

Query: 355 EIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY 414
            ++    A+ ++  V T + ++  +  +G+L DA ++   +  +   +    Y  +  + 
Sbjct: 492 VVLKISFAQGVAVKVETLNDVLGAFEASGKLSDARDLVHAVSSIEPSVAAHLYKRLAVML 551

Query: 415 AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF-------EQMKA 467
           AK GRF EA    +  ++ G  + +     L+  Y + G  DE    F        +M A
Sbjct: 552 AKAGRFSEAEEEMRTSQTYGQVQVSDFLKVLVASYDRAGMQDEALARFLDMTTEGLEMDA 611

Query: 468 DCVSPNLLTY----------STLIDV------------------YSKGGLYKEAMQIFRE 499
           + +   ++ Y            LID                   Y K  L++ A  +FR+
Sbjct: 612 EVLQTAVMCYCRKGFAFVAHELLIDCLHAFDVKDSAMHVAIIASYGKLKLWQNAEIVFRD 671

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
            +Q G   +   YSAL+ A  + G  E A   LD M   G++PN    N +++AFGR+  
Sbjct: 672 LQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGK 731

Query: 560 TECTVDDVER--DLGKQKES-------------ANLDAMCSQDDKDVQEAGRTDN-QIIK 603
            +   +  +R  ++G    S              NL+   S   + ++EAG + + Q+ K
Sbjct: 732 AKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSM-YRQMKEAGFSPSIQVFK 790

Query: 604 VFGQLVAEKAGQGKKENRCRQ-----------------EILCILG-------VFQKMHKL 639
               L + +  +   E   +                   +   LG       VF+ M ++
Sbjct: 791 ALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEI 850

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN----QVYGV---AHGLLMGYRDN 692
              P+  TF+ ++   SR    ++A  LL E+    N      Y     A+G L  Y D 
Sbjct: 851 GCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYED- 909

Query: 693 IWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGK 740
               A  +F  +        +  YN + ++    G+ R  + ++ + K
Sbjct: 910 ----AELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMK 953



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 126/627 (20%), Positives = 238/627 (37%), Gaps = 106/627 (16%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +AMIS+ GR G+V+ A +IF     +G+      +++++ A+ R G  +E   +   M+ 
Sbjct: 235 NAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRD 294

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                + +TYN +I   GK G+  K   E++  M   G  PD +TF  L+    + G   
Sbjct: 295 ARCSSDEITYNTMIHMYGKAGMHRK-AEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVN 353

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +F +M+   +   +  ++ ++ A  K      A    + M    + P+++ YS M+
Sbjct: 354 EAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVML 413

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY---------------------- 414
           D + KAG  +  + ++  M   G+  +   Y  ++ ++                      
Sbjct: 414 DVFFKAGMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSVAEIENLSKEMVQSSAS 473

Query: 415 --------AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
                   AK G + EA +V K   + G+     T N +LG +   GK  + R +   + 
Sbjct: 474 LAALSSTLAKGGFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEASGKLSDARDLVHAVS 533

Query: 467 ADCVSPNLLTY-------------------------------------STLIDVYSKGGL 489
           +  + P++  +                                       L+  Y + G+
Sbjct: 534 S--IEPSVAAHLYKRLAVMLAKAGRFSEAEEEMRTSQTYGQVQVSDFLKVLVASYDRAGM 591

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
             EA+  F +    GL+ D  +    +   C+ G    A  LL +        +   + +
Sbjct: 592 QDEALARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFDVKDSAMHVA 651

Query: 550 IIDAFGRS---ATTECTVDDVERD------------LGKQKESANLDAMCSQDDKDV--- 591
           II ++G+       E    D+++             L    E+ N +      D  V   
Sbjct: 652 IIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAG 711

Query: 592 -QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
            Q      N +++ FG     +AG+ K+          I   FQ++ ++ I PN  TF  
Sbjct: 712 LQPNATCANYVLEAFG-----RAGKAKE----------ISEFFQRLPEMGISPNSRTFVV 756

Query: 651 ILNACSRCNSFEDASMLLEELRL--FDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMD 708
           I +A SR  + E+A  +  +++   F   +      L +  R+ + + A  L  ++K   
Sbjct: 757 IFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAG 816

Query: 709 SSTASAFYNALTDMLWHFGQKRGAQLV 735
                  YN +  +    G  R A LV
Sbjct: 817 LELDIDIYNHMISLYSKLGSYRNAALV 843



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/381 (22%), Positives = 167/381 (43%), Gaps = 3/381 (0%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
            Y+ LL      G + +A +     V    + N     A+ ++   GR GK       F+ 
Sbjct: 684  YSALLSAYAETGNFERATRALDNMVAAGLQPN--ATCANYVLEAFGRAGKAKEISEFFQR 741

Query: 219  ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                G       F  +  A+ R+G  +EA S++  MK     P++  + A++    +  V
Sbjct: 742  LPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETV 801

Query: 279  DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            +     E+  D+ + G++ D   +N ++++ S+ G +  A  +F  M   G   D  T+N
Sbjct: 802  EID-AEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFN 860

Query: 339  TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            TL+    +   +  A  ++ EM     +PN+ TY+T+I  Y +    +DA  +F  +   
Sbjct: 861  TLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAET 920

Query: 399  GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            G   D  +YN ++++Y K G   +   + ++M+  G      T + L+  YGK G   + 
Sbjct: 921  GCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKA 980

Query: 459  RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
              + E +    +SP+ + Y+++I+ +     Y  A+   R+   A ++   V  +  + A
Sbjct: 981  EEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACVRPTHVTITCFVGA 1040

Query: 519  LCKNGLVESAVSLLDEMTKEG 539
                     A+ LL  +++ G
Sbjct: 1041 ASVCERSSHALMLLKALSEAG 1061



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/473 (20%), Positives = 191/473 (40%), Gaps = 69/473 (14%)

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
           +L + G+   A+    T+   G          L+++Y R+G   EA++ F  M    L+ 
Sbjct: 550 MLAKAGRFSEAEEEMRTSQTYGQVQVSDFLKVLVASYDRAGMQDEALARFLDMTTEGLEM 609

Query: 262 NL-VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           +  V   AV+  C KG     H  E+  D L      D     +++A   +  LW+ A  
Sbjct: 610 DAEVLQTAVMCYCRKGFAFVAH--ELLIDCLHAFDVKDSAMHVAIIASYGKLKLWQNA-- 665

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
              E+V R + Q  F  NT                                YS ++  YA
Sbjct: 666 ---EIVFRDLQQHGFAGNT------------------------------SAYSALLSAYA 692

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           + G  + A      M   G+  +    N VL  + + G+ +E     + +   GI  ++ 
Sbjct: 693 ETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSR 752

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           T+  +   + + G  +E R M+ QMK    SP++  +  L+ +YS+  +  +A ++ ++ 
Sbjct: 753 TFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDI 812

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           K+AGL+ D+ +Y+ +I    K G   +A  +   M + G  P+  T+N++I  + R+   
Sbjct: 813 KKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMV 872

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
           +     + R++ K   + N+                T   +I  +G+L A +  +     
Sbjct: 873 Q-EAQALLREMIKTGNAPNIS---------------TYTTLISAYGRLQAYEDAEL---- 912

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
                      VF+ + +   KP+   ++ ++N   +         ++E++++
Sbjct: 913 -----------VFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKV 954



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 31/198 (15%)

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           +PN    + ++ V  +      A ++F +  ++ +   V +Y++L+    ++G   S   
Sbjct: 88  APNPRMLAVMLSVLGRANQPGLAQELF-DRAESSIGNCVQVYNSLMSVYARHGDWNSVQQ 146

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
           LL  M   G RP++VT+N +I A  R    E                     + S   +D
Sbjct: 147 LLCRMQDRGCRPDLVTFNIVIKARTRGGMQE--------------------GLASSLLQD 186

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
           V  AG   + I   +  L++  +      NR    IL    +F++M +    P++ T++A
Sbjct: 187 VYAAGLRPDTI--TYNTLISACS----LNNRLSDAIL----IFEEMQRQGCDPDIWTYNA 236

Query: 651 ILNACSRCNSFEDASMLL 668
           +++   R    E AS + 
Sbjct: 237 MISVYGRAGRVEAASSIF 254


>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 225/429 (52%), Gaps = 6/429 (1%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           D+ F+++ +G +  W +A++ + +   R     +   LA+ ++S+LG+  +  LA  IF 
Sbjct: 130 DFCFVVKWVG-QSSWQRALEVYEWLNLRHWYSPNARMLAT-ILSVLGKANQEALAVEIFA 187

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
            A     GNTV  ++A++  Y R+G   +   + + M+    +P+LV++N +I+A  K G
Sbjct: 188 RA-EAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSG 246

Query: 278 VDFKHV-VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
               ++ +E+ +++ R+G+QPD IT+N+L++ CSR    E A  ++N+MV      D++T
Sbjct: 247 TMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWT 306

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN ++    +      A  +  ++ +K   P+ VTY++++  +A+ G +D    +  +M 
Sbjct: 307 YNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMV 366

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
            +G G D ++YNT++ +Y K G+ + A  +  +M+ SG   DAVTY  L+   GK     
Sbjct: 367 KMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIK 426

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E   +  +M    V P L T+S LI  Y+K G   EA + F    ++G+K D + YS ++
Sbjct: 427 EAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVML 486

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
           D L +      A+ L  EM     +P+   Y  ++   G+    E  V  V +D+ ++  
Sbjct: 487 DILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREE-DVHKVVKDM-EELC 544

Query: 577 SANLDAMCS 585
             N   +CS
Sbjct: 545 GMNSQVICS 553



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 159/708 (22%), Positives = 304/708 (42%), Gaps = 96/708 (13%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS   R   ++ A  ++   +       ++ ++A+IS YGR G  +EA  +F  ++ 
Sbjct: 273 NTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLES 332

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+ VTYN+++ A  + G +   V EI +DM++ G   D +T+N+++ +  + G  +
Sbjct: 333 KGFLPDAVTYNSLLYAFAREG-NVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHD 391

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L+++M   G   D  TY  L+D++ K   +  A E+M+EM    + P + T+S +I
Sbjct: 392 LAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALI 451

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            GYAKAG+  +A   F  M   GI  D ++Y+ +L I  +     +A+ + +EM     +
Sbjct: 452 CGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFK 511

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI--------------- 481
            D   Y  +L   GK+ + ++V ++ + M+  C   + +  S L+               
Sbjct: 512 PDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGECFDHAANMLRLA 571

Query: 482 -------DVYSKG---GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
                  D Y K    GL+    ++F        K D   Y  ++     +G    A  L
Sbjct: 572 ISQGCELDQYGKARDFGLFCGTEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKL 631

Query: 532 LDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVERD---LGKQKESANLDAMCS 585
           L  M + G+ P + T + ++ ++   G+    E  +D+++ +   L     S+ +DA   
Sbjct: 632 LGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLK 691

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
             D +V                                      +    +M K  ++P+ 
Sbjct: 692 NGDHNVA-------------------------------------IQKLMEMKKDGLEPDH 714

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVK 705
             ++  + A S      +A +LL+ LR   +  + +   LL    D++  +  +  +++ 
Sbjct: 715 RIWTCFVRAASLSQHTSEAIVLLKALR---DTGFDLPIRLLTEKSDSLVSEVDNCLEKLG 771

Query: 706 LMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVW--------ENVWSESCLDLH 757
            ++ + A  F NAL D+LW F  +  A  V     +R ++        E  W     D  
Sbjct: 772 PLEDNAAFNFVNALEDLLWAFELRATASWVFQLAVKRSIYRHDVFRVAEKDWGA---DFR 828

Query: 758 LMSSGAARAMVHAWLLNIHSIVF--------EGHEL-PKLLSILTGWGKHSKVVGDGALR 808
            MS+G+A   +  WL ++ +  F        +G+ L PK + ++TG  +++ V    +L 
Sbjct: 829 KMSAGSALVGLTLWLDHMQAKYFYFWQDASLQGYPLSPKSVVLITGTAEYNMV----SLN 884

Query: 809 RAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHD 856
             ++  L  MG+PF       G  ++    +  WL++S     L L D
Sbjct: 885 STLKAFLWEMGSPFLPCKTRSGLLVAKAHSLRMWLKDSSFCLDLELKD 932



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 180/392 (45%), Gaps = 42/392 (10%)

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVV-TYSTMIDGYAKAGRLDDALNMFSEMKF 397
           T+L  + K  Q  LA EI A   A+  S N V  Y+ M+  YA+ GR      +   M+ 
Sbjct: 168 TILSVLGKANQEALAVEIFAR--AEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRS 225

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEE--ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
            G   D VS+NT+++   K G      A+ +  E+  SGI+ D +TYN L+    ++   
Sbjct: 226 RGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNL 285

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           +E  +++  M A    P+L TY+ +I VY + G+ +EA ++F++ +  G   D V Y++L
Sbjct: 286 EEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSL 345

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           + A  + G V+    + ++M K G   + +TYN+II  +G+           + DL  Q 
Sbjct: 346 LYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRG---------QHDLAFQL 396

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
            S            D++ +GR+ + +      ++ +  G+        +       V  +
Sbjct: 397 YS------------DMKLSGRSPDAVTYT---VLIDSLGKANMIKEAAE-------VMSE 434

Query: 636 MHKLKIKPNVVTFSAIL----NACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRD 691
           M   ++KP + TFSA++     A  R  + E    +L      D+  Y V   +L+ + +
Sbjct: 435 MLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNE 494

Query: 692 NIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
           +   +A+ L+ E+ L       A Y  +  +L
Sbjct: 495 S--GKAMKLYQEMVLHSFKPDHALYEVMLRVL 524


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 242/511 (47%), Gaps = 37/511 (7%)

Query: 178 CFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISA 237
           C AF V + +         ++++  L ++G VDLA  I++  +  G    VY  + +I+A
Sbjct: 47  CEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINA 106

Query: 238 YGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP 297
             ++   +   S  + M+   + P++VTYN +I+A  + G+  +   E+ D M   G++P
Sbjct: 107 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL-LEEAFELMDSMSGKGLKP 165

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
              T+N+++    + G +  A+ + +EM+  G+  D  TYN LL   C+   M  A  I 
Sbjct: 166 CVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIF 225

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
            EMP++ + P++V++S +I   +K G LD AL  F +MK  G+  D V Y  ++  + + 
Sbjct: 226 DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 285

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G   EAL V  EM   G   D VTYN +L G  K+    E   +F +M    V P+  T+
Sbjct: 286 GVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 345

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           +TLI+ YSK G   +A+ +F    Q  LK DVV Y+ LID  CK   +E    L ++M  
Sbjct: 346 TTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMIS 405

Query: 538 EGIRPNVVTYNSIIDAF-------------------GRSATTECTVDDVERDLGKQKESA 578
             I PN ++Y  +I+ +                   G  AT   T + + +   +   + 
Sbjct: 406 RRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATI-ITCNTIVKGYCRAGNAV 464

Query: 579 NLDAMCSQD-DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
             D   S    K +   G T N +I  F           K+EN  R        +  KM 
Sbjct: 465 KADEFLSNMLLKGIVPDGITYNTLINGF----------IKEENMDRA-----FALVNKME 509

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
              + P+V+T++ ILN  SR    ++A +++
Sbjct: 510 NSGLLPDVITYNVILNGFSRQGRMQEAELIM 540



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 176/347 (50%), Gaps = 1/347 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+I +L + G +D A   F    N G       ++ LI  + R+G   EA+ V + M  
Sbjct: 241 SALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 300

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                ++VTYN +++   K  +      E+F +M   GV PD  TF +L+   S+ G   
Sbjct: 301 QGCVLDVVTYNTILNGLCKEKM-LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMN 359

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF  M+ R +  D+ TYNTL+D  CKG++M+   E+  +M ++ I PN ++Y  +I
Sbjct: 360 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 419

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY   G + +A  ++ EM   G     ++ NT++  Y + G   +A      M   GI 
Sbjct: 420 NGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIV 479

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +TYN L+ G+ K+   D    +  +M+   + P+++TY+ +++ +S+ G  +EA  I
Sbjct: 480 PDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELI 539

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             +  + G+  D   Y++LI+       ++ A  + DEM + G  P+
Sbjct: 540 MLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 175/335 (52%), Gaps = 3/335 (0%)

Query: 225 GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK-GGVDFKHV 283
           G+    F  L+  Y ++   +E    F  +K   L  ++   N+++    K G VD    
Sbjct: 24  GSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW- 82

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
            EI+ +++R+GVQ +  T N ++    +    E  ++  ++M  +G+  D+ TYNTL++A
Sbjct: 83  -EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C+   ++ AFE+M  M  K + P V TY+ +I+G  K G+   A  +  EM  +G+  D
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +YN +L    +     +A  +  EM S G+  D V+++AL+G   K G  D+  + F 
Sbjct: 202 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 261

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
            MK   ++P+ + Y+ LI  + + G+  EA+++  E  + G   DVV Y+ +++ LCK  
Sbjct: 262 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 321

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           ++  A  L  EMT+ G+ P+  T+ ++I+ + +  
Sbjct: 322 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDG 356



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 174/342 (50%), Gaps = 1/342 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ IF+   ++G    + +FSALI    ++G   +A+  F  MK   L P+ V Y  +I 
Sbjct: 221 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 280

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              + GV     +++ D+ML  G   D +T+N++L    +  +   A  LF EM  RG+ 
Sbjct: 281 GFCRNGV-MSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 339

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D +T+ TL++   K   M+ A  +   M  +N+ P+VVTY+T+IDG+ K   ++    +
Sbjct: 340 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 399

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           +++M    I  + +SY  +++ Y  +G   EA  +  EM   G     +T N ++ GY +
Sbjct: 400 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 459

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G   +       M    + P+ +TY+TLI+ + K      A  +  + + +GL  DV+ 
Sbjct: 460 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 519

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           Y+ +++   + G ++ A  ++ +M + G+ P+  TY S+I+ 
Sbjct: 520 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 561


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 200/396 (50%), Gaps = 2/396 (0%)

Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETAL 220
            L+  L    +  +A   F  A +   R        +A+++ L    +VDLA+  F +AL
Sbjct: 124 MLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSAL 183

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGV- 278
                  +Y F+ +IS   R G  ++A  V   +K + L P++ TYN++ID  C KGG  
Sbjct: 184 RRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAG 243

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           +  HV  +  +M+  G+ P  +TF  L+    +     AA  +F EM  +GI   + TYN
Sbjct: 244 NMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYN 303

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L+  +C   +++   ++M EM    +SPN +T+  ++ G+ K G + DA +    M   
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            +  D V YN ++ +Y +LG+ E+A+ V + M   GI  +  TYN L+ G+ + G +   
Sbjct: 364 NVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + ++MK   +  +++TY+ LI      G  ++A+++  E  + GL+ + + Y+ +I  
Sbjct: 424 SGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQG 483

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            C  G ++SA  +   M K   R NVVTYN  I  F
Sbjct: 484 FCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 154/325 (47%), Gaps = 34/325 (10%)

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P+  + + ++ G   A R+D A   F       +  D  ++NTV+S   ++G+  +A  V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDE---VRRMFEQMKADCVSPNLLTYSTLIDV 483
            K++++ G+     TYN+L+ GY K+G       V  + ++M    +SP  +T+  LI+ 
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y K      A+++F E KQ G+ A VV Y++LI  LC  G VE  V L++EM   G+ PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
            +T+  ++  F +        D ++                   +++V+      N +I 
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWID----------------GMTERNVEPDVVIYNILID 377

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           V+ +L       GK E+         + V + M K  I PNV T++ ++   SR   +  
Sbjct: 378 VYRRL-------GKMED--------AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422

Query: 664 ASMLLEELRLFDNQVYGVAHGLLMG 688
           AS LL+E++    +   V + +L+G
Sbjct: 423 ASGLLDEMKEKGIEADVVTYNVLIG 447



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/334 (21%), Positives = 126/334 (37%), Gaps = 67/334 (20%)

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R    + NALL G     + D   + F       VSP++ T++T+I    + G  ++A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVS---LLDEMTKEGIRPNVVTYNSIID 552
           + ++ K  GL   V  Y++LID  CK G   +      LL EM + GI P  VT+  +I+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
            + +++ T   V   E ++ +Q  +A+                      +  +  L++  
Sbjct: 273 GYCKNSNTAAAVRVFE-EMKQQGIAAS----------------------VVTYNSLISGL 309

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             +GK E   +        + ++M  L + PN +TF  +L    +     DA        
Sbjct: 310 CSEGKVEEGVK--------LMEEMEDLGLSPNEITFGCVLKGFCKKGMMADA-------- 353

Query: 673 LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
                              N W+      D +   +       YN L D+    G+   A
Sbjct: 354 -------------------NDWI------DGMTERNVEPDVVIYNILIDVYRRLGKMEDA 388

Query: 733 QLVVLEGKRRQVWENVWSESCLDLHLMSSGAARA 766
             V     ++ +  NV + +CL      SG  R+
Sbjct: 389 MAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 240/477 (50%), Gaps = 36/477 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++ +L R  K   A ++F + L       V +++ +IS +  +G    A+ +   MK 
Sbjct: 81  NSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKS 140

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+  T+  +I A    G D    ++    M   G  P+ +T+ +L+A  +R    E
Sbjct: 141 AGFAPDAFTHTPIITAMANAG-DLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLE 196

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L  EM  RG   ++ TYN L+DA+CK + +  A +++ +M     +PNV+T+++++
Sbjct: 197 EAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLV 256

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG+ K G +DDA  +   M   G+  + V+Y+ ++    K  +F EA  V +EM++ G+ 
Sbjct: 257 DGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVT 316

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            DA TY+AL+ G  K  K +E  +M  +M     +P+++ YS++I  + K G   EA + 
Sbjct: 317 PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKT 376

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG-IRPNVVTYNSIIDAFG 555
            +E ++     DVV Y+ +ID LCK G +  A  +L++M + G + P+VVTY+++I+   
Sbjct: 377 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLC 436

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
           +S            D+  + +   LD MC        +AG   N  +  +  ++      
Sbjct: 437 KS------------DMLVEAQKL-LDRMC--------KAGC--NPDVVTYTTIIDGLCKC 473

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           G+ E     E L      Q M +    PNVVT++ +++   +    ++A  ++EE+R
Sbjct: 474 GRLEE---AEYL-----LQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMR 522



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 189/420 (45%), Gaps = 59/420 (14%)

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           ++NSLL V  R      A +LF   +    + D+ +YN ++   C    +  A E++ EM
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLD--------------------------------DA 388
            +   +P+  T++ +I   A AG LD                                +A
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEA 198

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           + +  EM+  G   + V+YN ++    KL     A  V K+M   G   + +T+N+L+ G
Sbjct: 199 MKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDG 258

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           + K+G  D+ R++   M A  + PN++TYS LID   K   + EA ++  E K  G+  D
Sbjct: 259 FCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPD 318

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
              YSALI  LCK   +E A  +L  M   G  P+VV Y+SII AF +S           
Sbjct: 319 AFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL-LEAQKTL 377

Query: 569 RDLGKQKESAN-------LDAMCSQDD--------KDVQEAGRTDNQIIKVFGQLVAEKA 613
           +++ KQ++S +       +D +C            + +QE+G     ++  +  ++    
Sbjct: 378 QEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVV-TYSTVI---- 432

Query: 614 GQGKKENRCRQEILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                   C+ ++L     +  +M K    P+VVT++ I++   +C   E+A  LL+ ++
Sbjct: 433 -----NGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMK 487



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 162/310 (52%), Gaps = 8/310 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+I  L +  K   AK + E     G     + +SALI    ++   +EA  +   M  
Sbjct: 288 SALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG 347

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
               P++V Y+++I A  K G       +   +M +    PD +T+N+++  +C  G + 
Sbjct: 348 SGCTPDVVVYSSIIHAFCKSG-KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406

Query: 316 EAARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           EA + +  +M   G +  D+ TY+T+++ +CK   +  A +++  M     +P+VVTY+T
Sbjct: 407 EA-QVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTT 465

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDG  K GRL++A  +   MK  G   + V+Y T++S   K  + +EA  V +EM ++G
Sbjct: 466 IIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAG 525

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK---ADCVSPNLLTYSTLIDVYSKGGLYK 491
              + VTYN ++ G    G+  E +++ ++MK   A+C SP+  TY T+++      L +
Sbjct: 526 CPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAEC-SPDAATYRTIVNALMSSDLVQ 584

Query: 492 EAMQIFREFK 501
           EA Q+  + K
Sbjct: 585 EAEQLLEQMK 594



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 142/275 (51%), Gaps = 6/275 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+I  L +  K++ A+ +       G    V  +S++I A+ +SG   EA      M++
Sbjct: 323 SALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRK 382

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNG-VQPDRITFNSLLAVCSRGGL 314
               P++VTYN VID  C  G +    V  I + M  +G V PD +T+++++    +  +
Sbjct: 383 QRKSPDVVTYNTVIDGLCKLGKIAEAQV--ILEQMQESGDVLPDVVTYSTVINGLCKSDM 440

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A+ L + M   G + D+ TY T++D +CK  +++ A  ++  M     +PNVVTY+T
Sbjct: 441 LVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTT 500

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES-- 432
           +I G  KA ++D+A  +  EM+  G   + V+YNT+++     GR +EA  + + M+   
Sbjct: 501 LISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGR 560

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           +    DA TY  ++          E  ++ EQMK+
Sbjct: 561 AECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 102/215 (47%), Gaps = 4/215 (1%)

Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEG-YGNTVYAFSALISAYGRSGY 243
           R++RK+      + +I  L +LGK+  A+ I E     G     V  +S +I+   +S  
Sbjct: 381 RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDM 440

Query: 244 CQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
             EA  + + M +    P++VTY  +ID   K G   +    +   M R G  P+ +T+ 
Sbjct: 441 LVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG-RLEEAEYLLQGMKRAGCAPNVVTYT 499

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP-- 361
           +L++   +    + A  +  EM + G   ++ TYNT+++ +C   ++  A +++  M   
Sbjct: 500 TLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDG 559

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
               SP+  TY T+++    +  + +A  +  +MK
Sbjct: 560 RAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 192/353 (54%), Gaps = 7/353 (1%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A ++F+  + EG+   V  +  LI+   + G    AI +  SM++ N +P++V Y
Sbjct: 151 GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVY 210

Query: 267 NAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            ++ID+  K     + V E   +F  M+  G+ PD  T+ SL+        W+    L N
Sbjct: 211 TSIIDSLCKD----RQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLN 266

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           +M++  I  D+  ++T++DA+CK  ++  A +++  M  + + PNVVTY+ ++DG+    
Sbjct: 267 QMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQS 326

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            +D+A+ +F  M   G   + +SYNT+++ Y K+ R ++A  + +EM    +  + VTYN
Sbjct: 327 EMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYN 386

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+ G    G+  +   +F +M A    P+L TY  L+D   K     EAM + +  + +
Sbjct: 387 TLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS 446

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +  D+ +Y+ +ID +C+ G +E+A  +   ++ +G+RPNV TY  +I+   R
Sbjct: 447 NMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCR 499



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 210/421 (49%), Gaps = 18/421 (4%)

Query: 142 LGDILKKFEFKLCGAD------DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL 195
           +GD L  F+ K+ G         Y  L+  L   G  + AI+     ++  E+ N Q  +
Sbjct: 153 IGDALHLFD-KMIGEGFQPNVVTYGTLINGLCKVGNTNAAIR----LLRSMEQGNCQPDV 207

Query: 196 A--SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
              +++I  L +  +V  A N+F   + +G    ++ +++LI +       +   ++ N 
Sbjct: 208 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQ 267

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSR 311
           M    + P++V ++ V+DA C +G +   H  ++ D M+  GV+P+ +T+N+L+   C +
Sbjct: 268 MINSKIMPDVVIFSTVVDALCKEGKITEAH--DVVDMMIIRGVEPNVVTYNALMDGHCLQ 325

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
             + EA + +F+ MVH G   ++ +YNTL++  CK  +MD A  +  EM  K + PN VT
Sbjct: 326 SEMDEAVK-VFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 384

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+T++ G    GRL DA+ +F EM   G   D  +Y  +L    K    +EA+ + K +E
Sbjct: 385 YNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 444

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            S +  D   Y  ++ G  + G+ +  R +F  + +  + PN+ TY+ +I+   + GL  
Sbjct: 445 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 504

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA ++F E    G   D   Y+ +   L +N     A+ LL EM   G   +V T   ++
Sbjct: 505 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 564

Query: 552 D 552
           +
Sbjct: 565 E 565



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 211/454 (46%), Gaps = 42/454 (9%)

Query: 223 GYGNTVYAFSALISAY---GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGV 278
           G    VY  + LI+++    R G+   A SV   + +  L+P+  T+  +I   C +G +
Sbjct: 97  GIPPDVYTLNILINSFCHLNRPGF---AFSVLAKILKLGLQPDTATFTTLIRGLCVEGKI 153

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                + +FD M+  G QP+ +T+ +L+    + G   AA  L   M       D+  Y 
Sbjct: 154 --GDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYT 211

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +++D++CK  Q+  AF + ++M  + ISP++ TY+++I              + ++M   
Sbjct: 212 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 271

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            I  D V ++TV+    K G+  EA  V   M   G+  + VTYNAL+ G+  Q + DE 
Sbjct: 272 KIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEA 331

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            ++F+ M  +  +PN+++Y+TLI+ Y K     +A  +F E  Q  L  + V Y+ L+  
Sbjct: 332 VKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHG 391

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
           LC  G ++ A++L  EM   G  P++ TY  ++D   + +       D    L K  E +
Sbjct: 392 LCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHL-----DEAMALLKTIEGS 446

Query: 579 NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMH 637
           N+D                D QI  +              +  CR  E+     +F  + 
Sbjct: 447 NMDP---------------DIQIYTIV------------IDGMCRAGELEAARDIFSNLS 479

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              ++PNV T++ ++N   R    ++A+ L  E+
Sbjct: 480 SKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 513



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 181/405 (44%), Gaps = 54/405 (13%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F+ ML     P  + FN LL   ++   +    +L N+M   GI  D++T N L+++ C 
Sbjct: 55  FNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCH 114

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +   AF ++A++    + P+  T++T+I G    G++ DAL++F +M   G   + V+
Sbjct: 115 LNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVT 174

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T+++   K+G    A+ + + ME    + D V Y +++    K  +  E   +F +M 
Sbjct: 175 YGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV 234

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              +SP++ TY++LI        +K    +  +   + +  DVV++S ++DALCK G + 
Sbjct: 235 GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKIT 294

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A  ++D M   G+ PNVVTYN+++D                               C Q
Sbjct: 295 EAHDVVDMMIIRGVEPNVVTYNALMDGH-----------------------------CLQ 325

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKL 639
            + D         + +KVF  +V                  C +        +F++M + 
Sbjct: 326 SEMD---------EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQK 376

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG 684
           ++ PN VT++ +++        +DA  L  E+         VAHG
Sbjct: 377 ELIPNTVTYNTLMHGLCHVGRLQDAIALFHEM---------VAHG 412



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 165/342 (48%), Gaps = 3/342 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  L  L +      +    +N      V  FS ++ A  + G   EA  V + M  
Sbjct: 246 TSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMII 305

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             ++PN+VTYNA++D  C +  +D    V++FD M+ NG  P+ I++N+L+    +    
Sbjct: 306 RGVEPNVVTYNALMDGHCLQSEMD--EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRM 363

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  LF EM  + +  +  TYNTL+  +C   ++  A  +  EM A    P++ TY  +
Sbjct: 364 DKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRIL 423

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +D   K   LD+A+ +   ++   +  D   Y  V+    + G  E A  +   + S G+
Sbjct: 424 LDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGL 483

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R +  TY  ++ G  ++G  DE  ++F +M  +  SP+  TY+T+     +      A+Q
Sbjct: 484 RPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQ 543

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           + +E    G  ADV   + L++ LC + L +S   +L E  +
Sbjct: 544 LLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 585


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 191/356 (53%), Gaps = 3/356 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +  A  +    L  G   T    + LI+ Y + G  ++A+           +P+ +TY
Sbjct: 234 GSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITY 293

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N  ++  C  G V   H +++ D M++ G  PD  T+N ++    + G  E A+ + N+M
Sbjct: 294 NTFVNGLCQNGHVG--HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 351

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V RG   DI T+NTL+ A+C G +++ A ++  ++  K +SP+V T++ +I+   K G  
Sbjct: 352 VERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDP 411

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             AL +F EMK  G   D V+YNT++     LG+  +AL + KEMES+G  +  VTYN +
Sbjct: 412 QLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTI 471

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K+ + +E   +F+QM    +S N +T++TLID   K     +A Q+  +    GL
Sbjct: 472 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGL 531

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + + + Y++++   CK G ++ A  +L  MT  G   +VVTY ++I+   ++  T+
Sbjct: 532 QPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQ 587



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 191/365 (52%), Gaps = 1/365 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +I+   +LG+V+ A    +  +  G+      ++  ++   ++G+   A+ V + M 
Sbjct: 258 VNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMV 317

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           +    P++ TYN V++   K G   +    I + M+  G  PD  TFN+L+     G   
Sbjct: 318 QEGHDPDVFTYNIVVNCLCKNG-QLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRL 376

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A +L  ++  +G+  D++T+N L++A+CK     LA  +  EM +   +P+ VTY+T+
Sbjct: 377 EEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTL 436

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID     G+L  AL++  EM+  G     V+YNT++    K  R EEA  V  +M+  GI
Sbjct: 437 IDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 496

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
            ++A+T+N L+ G  K  + D+  ++  QM ++ + PN +TY++++  Y K G  K+A  
Sbjct: 497 SRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 556

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I +     G + DVV Y  LI+ LCK G  + A+ LL  M  +G+R     YN +I +  
Sbjct: 557 ILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLF 616

Query: 556 RSATT 560
           R   T
Sbjct: 617 RRNNT 621



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 141/545 (25%), Positives = 243/545 (44%), Gaps = 58/545 (10%)

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKR-YNLKPNLVTYN 267
           DL K +      EG+   V    + + +Y R     +A+  V N +   + ++ + V YN
Sbjct: 95  DLMKVLVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYN 154

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            +++   +G    K +  ++ +M   G++PD +TFN+L+    R      A  +  EM  
Sbjct: 155 HLLNVLVEGS-KMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSS 213

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G+  D  T+ TL+    +   +  A  + A M     SP  VT + +I+GY K GR++D
Sbjct: 214 SGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVED 273

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           AL    +    G   D+++YNT ++   + G    AL V   M   G   D  TYN ++ 
Sbjct: 274 ALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVN 333

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
              K G+ +E + +  QM      P++ T++TLI     G   +EA+ + R+    GL  
Sbjct: 334 CLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSP 393

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           DV  ++ LI+ALCK G  + A+ L +EM   G  P+ VTYN++ID         C++  +
Sbjct: 394 DVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNL-------CSLGKL 446

Query: 568 ER--DLGKQKESAN-----------LDAMCSQ----------DDKDVQEAGR---TDNQI 601
            +  DL K+ ESA            +D +C +          D  D+Q   R   T N +
Sbjct: 447 GKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 506

Query: 602 IKVF---------GQLVAEKAGQGKKENR----------CRQ-EILCILGVFQKMHKLKI 641
           I             QL+++   +G + N           C+Q +I     + Q M     
Sbjct: 507 IDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGF 566

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALS 699
           + +VVT+  ++N   +    + A  LL  +R+   +    A+  ++   +R N    A++
Sbjct: 567 EVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMN 626

Query: 700 LFDEV 704
           LF E+
Sbjct: 627 LFREM 631


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 234/474 (49%), Gaps = 34/474 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           M++ L + GK+D           +G    +  ++ L++AY R G   EA  + + M    
Sbjct: 230 MVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG 289

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEA 317
           LKP L TYNA+I+   K G  ++    + D+ML  G+ P+  TFN +L   C +  +WEA
Sbjct: 290 LKPGLFTYNALINGLCKEG-SYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEA 348

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
            R +FNEM+ RG+  D+ ++++++    +  ++  A     +M    + P+ V Y+ +I+
Sbjct: 349 ER-VFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILIN 407

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GY +   +  AL M +EM   G  +D V+YNT+L+   +    ++A  + KEM   G+  
Sbjct: 408 GYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFP 467

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  T   L+ GY K G   +   +FE M    + P+++TY+TL+D + K G  ++A +++
Sbjct: 468 DFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELW 527

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            +     +    + +S LI+  C  GLV  A  L DEM ++GI+P +VT N+II  + R+
Sbjct: 528 YDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRA 587

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
                            K +  L+ M S+    V     T N +I  F           K
Sbjct: 588 GNL-------------SKANDFLNTMISE---GVPPDCITYNTLINSF----------VK 621

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +EN  R   L        M +  + PN+VT++AIL   SR    ++A M+L ++
Sbjct: 622 EENFDRAFFL-----INNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKM 670



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 186/360 (51%), Gaps = 1/360 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+ L + G  + AK + +  L  G       F+ ++    R     EA  VFN M +
Sbjct: 298 NALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQ 357

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P+L+++++++    + G +    +  F+ M   G+ PD + +  L+    R     
Sbjct: 358 RGVVPDLISFSSIVGVFSRNG-ELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVS 416

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  + NEMV RG   D+ TYNTLL+ +C+G  +D A E+  EM  + + P+  T +T+I
Sbjct: 417 GALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLI 476

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            GY K G +  AL++F  M    +  D V+YNT++  + K+G  E+A  +  +M S  I 
Sbjct: 477 HGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIF 536

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              ++++ L+ G+   G   E  R++++MK   + P L+T +T+I  Y + G   +A   
Sbjct: 537 PSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDF 596

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
                  G+  D + Y+ LI++  K    + A  L++ M + G+ PN+VTYN+I+  F R
Sbjct: 597 LNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSR 656



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 182/343 (53%), Gaps = 1/343 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ +F   L  G    + +FS+++  + R+G    A++ F  MK   L P+ V Y  +I+
Sbjct: 348 AERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILIN 407

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              +   D    +++ ++M+  G   D +T+N+LL    RG + + A  LF EMV RG+ 
Sbjct: 408 GYCRND-DVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVF 466

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D +T  TL+   CK   M  A  +   M  +++ P+VVTY+T++DG+ K G ++ A  +
Sbjct: 467 PDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKEL 526

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           + +M    I    +S++ +++ +  LG   EA  +  EM+  GI+   VT N ++ GY +
Sbjct: 527 WYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLR 586

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G   +       M ++ V P+ +TY+TLI+ + K   +  A  +    ++ GL  ++V 
Sbjct: 587 AGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVT 646

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           Y+A++    ++G ++ A  +L +M  +GI P+  TY S+I+ +
Sbjct: 647 YNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGY 689



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 174/347 (50%), Gaps = 1/347 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S+++ +  R G++  A   FE     G       ++ LI+ Y R+     A+ + N M  
Sbjct: 368 SSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVE 427

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                ++VTYN +++   +G +      E+F +M+  GV PD  T  +L+    + G   
Sbjct: 428 RGCVMDVVTYNTLLNGLCRGKM-LDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMT 486

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +LF  M  R +  D+ TYNTL+D  CK  +M+ A E+  +M ++ I P+ +++S +I
Sbjct: 487 KALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILI 546

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G+   G + +A  ++ EMK  GI    V+ NT++  Y + G   +A      M S G+ 
Sbjct: 547 NGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVP 606

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +TYN L+  + K+  +D    +   M+   + PNL+TY+ ++  +S+ G  +EA  +
Sbjct: 607 PDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMV 666

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             +    G+  D   Y++LI+       ++ A  + DEM + G  P+
Sbjct: 667 LHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 178/365 (48%), Gaps = 31/365 (8%)

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           N+LL    + G  + A  ++ + V  G   +++T N +++A+CK  ++D     ++EM  
Sbjct: 193 NALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEE 252

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
           K +  ++VTY+T+++ Y + G + +A  +   M   G+     +YN +++   K G +E 
Sbjct: 253 KGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYER 312

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A  V  EM   G+  +A T+N +L    ++    E  R+F +M    V P+L+++S+++ 
Sbjct: 313 AKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVG 372

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
           V+S+ G    A+  F + K  GL  D V+Y+ LI+  C+N  V  A+ + +EM + G   
Sbjct: 373 VFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVM 432

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII 602
           +VVTYN++++   R               GK  + A+      +  K++ E G     + 
Sbjct: 433 DVVTYNTLLNGLCR---------------GKMLDDAD------ELFKEMVERG-----VF 466

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
             F  L     G  K  N  +      L +F+ M    +KP+VVT++ +++   +    E
Sbjct: 467 PDFYTLTTLIHGYCKDGNMTKA-----LSLFETMTLRSLKPDVVTYNTLMDGFCKVGEME 521

Query: 663 DASML 667
            A  L
Sbjct: 522 KAKEL 526



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 143/306 (46%), Gaps = 40/306 (13%)

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKAD--CVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            V ++ L+  Y +  K  E    F+ ++    CVS N    + L+    K G    A ++
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSIN--ACNALLGAIVKVGWVDLAWKV 211

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           + +F ++G   +V   + +++ALCK+G +++    L EM ++G+  ++VTYN++++A+ R
Sbjct: 212 YEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCR 271

Query: 557 SATTECTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKV------ 604
                     V+   GK  +      +A ++ +C +     + A R  ++++ V      
Sbjct: 272 RGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEG--SYERAKRVLDEMLGVGLCPNA 329

Query: 605 --FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
             F  ++ E     +KE+    E      VF +M +  + P++++FS+I+   SR     
Sbjct: 330 ATFNPMLVESC---RKEDVWEAE-----RVFNEMLQRGVVPDLISFSSIVGVFSRNGELG 381

Query: 663 DASMLLEELR----LFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVK----LMDSSTAS 713
            A    E+++    + D  +Y +   L+ GY R++    AL + +E+     +MD  T +
Sbjct: 382 RALAYFEKMKGVGLVPDTVIYTI---LINGYCRNDDVSGALKMRNEMVERGCVMDVVTYN 438

Query: 714 AFYNAL 719
              N L
Sbjct: 439 TLLNGL 444


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 231/469 (49%), Gaps = 21/469 (4%)

Query: 101 STRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYT 160
           S R  S+M      I+ ++ H +++  AL    AFA       D+ +     LC    + 
Sbjct: 436 SLRLYSRMKSLSLPISTASLHPLLS--ALPSAPAFAL----FADMFR-LRLPLC-TTTFN 487

Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF-ETA 219
            +LR L + G+ ++A++     +++  R N      + +I+     G+V  A +I  E  
Sbjct: 488 IMLRHLCSAGKPARALEL----LRQMPRPN--AVTYNTVIAGFCSRGRVQAALDIMREMR 541

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVTYNAVIDA-CGKGG 277
              G     Y +  +IS + + G   EA+ VF+ M  +  +KP  V YNA+I   C +G 
Sbjct: 542 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 601

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D   +    D M+  GV     T+N L+      G    A  L  EM  +G+  D+FTY
Sbjct: 602 LDTALLYR--DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 659

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L++  CK   +  A EI   M  + +   VVTY+ +I   +K G++ +   +F E   
Sbjct: 660 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 719

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI  D V YN +++ ++  G  + A  +  EME   I  D VTYN L+ G    G+ DE
Sbjct: 720 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 779

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            R++ ++M    + P+L+TY+TLI  YS  G  K+A++I  E    G    ++ Y+ALI 
Sbjct: 780 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 839

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            LCKNG  + A +++ EM + GI P+  TY S+I+  G +   E  +DD
Sbjct: 840 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE--GLTTEDERAIDD 886



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 189/396 (47%), Gaps = 53/396 (13%)

Query: 286 IFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +F DM R  +     TFN +L  +CS G   + AR L  E++ +    +  TYNT++   
Sbjct: 470 LFADMFRLRLPLCTTTFNIMLRHLCSAG---KPARAL--ELLRQMPRPNAVTYNTVIAGF 524

Query: 345 CKGAQMDLAFEIMAEMPAKN-ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG-IGL 402
           C   ++  A +IM EM  +  I+PN  TY T+I G+ K GR+D+A+ +F EM   G +  
Sbjct: 525 CSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 584

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           + V YN ++  Y   G+ + ALL    M   G+     TYN L+      G+  E   + 
Sbjct: 585 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 644

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           E+M    ++P++ TY+ LI+ + K G  K+A++IF    + G++A VV Y+ALI AL K 
Sbjct: 645 EEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKK 704

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           G V+    L DE  + GIRP++V YN++I++                       S N+D 
Sbjct: 705 GQVQETDKLFDEAVRRGIRPDLVLYNALINS--------------------HSTSGNID- 743

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL--- 639
                            +  ++ G++  ++              LC+LG   +  KL   
Sbjct: 744 -----------------RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 786

Query: 640 ----KIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                I+P++VT++ +++  S     +DA  +  E+
Sbjct: 787 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 822



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 130/286 (45%), Gaps = 39/286 (13%)

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +F++M  L + L   ++N +L      G+   AL + ++M     R +AVTYN ++ 
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 522

Query: 448 GYGKQGKYDEVRRMFEQMKA-DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG-L 505
           G+  +G+      +  +M+    ++PN  TY T+I  + K G   EA+++F E    G +
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           K + V+Y+ALI   C  G +++A+   D M + G+   V TYN ++ A            
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD-------- 634

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQE-AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                 G+  E+  L          V+E  G+     +  +  L+     +G  +     
Sbjct: 635 ------GRGTEAYEL----------VEEMGGKGLAPDVFTYNILINGHCKEGNVKK---- 674

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                L +F+ M +  ++  VVT++A++ A S+    ++   L +E
Sbjct: 675 ----ALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 716


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 192/360 (53%), Gaps = 1/360 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++I  LG+ GK+D A  +FE  L+ G+      +++LI  +   G  ++   ++  M R 
Sbjct: 460 SLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRR 519

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             +P+L   N  +D   K G + +    IF+DM   G  PD  +++ L+   ++ G    
Sbjct: 520 GGRPDLTLLNTYMDCVFKAG-EVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARE 578

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
             N+F  M  +G   D   YN ++D +CK  ++D A+E++ EM  K++ P V TY +++D
Sbjct: 579 TSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVD 638

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G AK  RLD+A  +F E K  GI L+ + Y++++  + K+GR +EA L+ +EM   G+  
Sbjct: 639 GLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 698

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +  T+N+L+    K  + DE    F+ MK    SPN  TYS LI+   +   Y +A   +
Sbjct: 699 NVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFW 758

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           +E ++ GL  +VV Y+ +I  L K G +  A SL +     G  P+  ++N++I+    +
Sbjct: 759 QEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNA 818



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 151/580 (26%), Positives = 271/580 (46%), Gaps = 38/580 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++M+ +L + G++  A+ +F     E      YA++ +I  YG +    +A  +   ++ 
Sbjct: 285 TSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRE 344

Query: 257 YNLKPNLVTYNAVIDACGKG-GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               P++V++N+++   GK   VD    + +FD M ++  +P+  T+N ++ +    G  
Sbjct: 345 RGCIPSVVSFNSILTCLGKKRKVD--EALTLFDVMKKDA-KPNISTYNIIIDMLCMAGRV 401

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  + +EM   G+  ++ + N ++D +CK  Q++ A  I      +  +PN VTY ++
Sbjct: 402 NEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSL 461

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K G++DDA  +F +M   G   + + Y +++  +   GR E+   + KEM   G 
Sbjct: 462 IDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGG 521

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R D    N  +    K G+ ++ R +FE MK+    P++ +YS LI   +K G  +E   
Sbjct: 522 RPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSN 581

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           IF+   Q G   D   Y+A++D LCK+G V+ A  +L+EM  + + P V TY SI+D   
Sbjct: 582 IFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLA 641

Query: 556 RSATTECTVDDVERD--LGKQKESANLD---AMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
           +       +D ++    L ++ +S  ++    + S       + GR D   +     ++ 
Sbjct: 642 K-------IDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYL-----ILE 689

Query: 611 EKAGQGKKENRC-----------RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
           E   +G   N              +EI   L  FQ M ++K  PN  T+S ++N   R  
Sbjct: 690 EMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQ 749

Query: 660 SFEDASMLLEELR---LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFY 716
            +  A +  +E++   L  N V        +    NI   A SLF+  K       SA +
Sbjct: 750 KYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNI-TDAYSLFERFKTNGGIPDSASF 808

Query: 717 NALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDL 756
           NAL + + +  +   A  V  E + R    NV  ++C+ L
Sbjct: 809 NALIEGMSNANRPMEAYQVFEETRLRGCRLNV--KTCISL 846



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 140/543 (25%), Positives = 256/543 (47%), Gaps = 56/543 (10%)

Query: 179 FAFAVKREERKNDQGKLAS-----AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSA 233
           F  A K  ER  ++G + S     ++++ LG+  KVD A  +F+    +   N +  ++ 
Sbjct: 332 FDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPN-ISTYNI 390

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID-ACGKGGVDFKHVVEIFDDMLR 292
           +I     +G   EA  + + M+   L PNL++ N ++D  C    ++  H   IF+    
Sbjct: 391 IIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAH--RIFESASE 448

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
            G  P+ +T+ SL+    + G  + A  LF +M+  G D +   Y +L+       + + 
Sbjct: 449 RGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKED 508

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
             +I  EM  +   P++   +T +D   KAG ++    +F +MK  G   D  SY+ ++ 
Sbjct: 509 GHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIH 568

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              K G+  E   + + M   G   DA  YNA++ G  K GK D+   + E+MK   V P
Sbjct: 569 GLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHP 628

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
            + TY +++D  +K     EA  +F E K  G++ +V+LYS+LID   K G ++ A  +L
Sbjct: 629 TVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLIL 688

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQ 592
           +EM K+G+ PNV T+NS++DA  ++       ++++  L           +C Q  K+++
Sbjct: 689 EEMMKKGLTPNVYTWNSLMDALVKT-------EEIDEAL-----------ICFQSMKEMK 730

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
            +  T    I + G    +K  +                 +Q+M K  + PNVVT++ ++
Sbjct: 731 CSPNTYTYSILINGLCRVQKYNKA-------------FVFWQEMQKQGLIPNVVTYTTMI 777

Query: 653 NACSRCNSFEDASMLLEELRL---------FDNQVYGVAHGLLMGYRDNIWVQALSLFDE 703
           +  ++  +  DA  L E  +          F+  + G+++        N  ++A  +F+E
Sbjct: 778 SGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNA-------NRPMEAYQVFEE 830

Query: 704 VKL 706
            +L
Sbjct: 831 TRL 833



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 141/571 (24%), Positives = 257/571 (45%), Gaps = 46/571 (8%)

Query: 210 DLA--KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           DLA  + + E   + GYG    A +AL++   RS   ++A  V  +M+    +P    Y 
Sbjct: 121 DLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYT 180

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            +I A  +     +  +E+   M   G +     F +L+   +R G  E A  L +E+  
Sbjct: 181 VLIGALAEARQP-ERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKG 239

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
             ++ DI  YN  +D   K   +D+A++   E+ A  + P+ V+Y++M+    KAGRL +
Sbjct: 240 SCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGE 299

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +F +M+         +YNT++  Y    RF++A  + + +   G     V++N++L 
Sbjct: 300 AEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILT 359

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
             GK+ K DE   +F+ MK D   PN+ TY+ +ID+    G   EA +I  E + AGL  
Sbjct: 360 CLGKKRKVDEALTLFDVMKKD-AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFP 418

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           +++  + ++D LCK   +E A  + +  ++ G  PN VTY S+ID  G+       +DD 
Sbjct: 419 NLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKG----KIDDA 474

Query: 568 ERDLGKQKESA-------------NLDAMCSQDD------KDVQEAGRTDNQIIKVFGQL 608
            R   K  ++              N      ++D      + ++  GR D  ++  +   
Sbjct: 475 YRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDC 534

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
           V  KAG+ +K             +F+ M      P+V ++S +++  ++     + S + 
Sbjct: 535 VF-KAGEVEKGR----------AIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIF 583

Query: 669 EELR----LFDNQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
           + +       D + Y  V  GL    + +   +A  + +E+K+       A Y ++ D L
Sbjct: 584 QAMSQQGFALDARAYNAVVDGLCKSGKVD---KAYEVLEEMKVKHVHPTVATYGSIVDGL 640

Query: 724 WHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
               +   A ++  E K + +  NV   S L
Sbjct: 641 AKIDRLDEAYMLFEEAKSKGIELNVILYSSL 671



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/512 (23%), Positives = 234/512 (45%), Gaps = 70/512 (13%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L    + + A  +     + GY  +V  F+ L+ A  R G  + A+++ + +K 
Sbjct: 180 TVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKG 239

Query: 257 YNLKPNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             L+P++V YN  ID  GK G VD     + F ++  +G++PD +++ S++ V  + G  
Sbjct: 240 SCLEPDIVLYNVCIDCFGKAGSVDMAW--KFFHELKAHGLRPDDVSYTSMVWVLCKAGRL 297

Query: 316 EAARNLFNEMV-----------------------------------HRGIDQDIFTYNTL 340
             A  LF +M                                     RG    + ++N++
Sbjct: 298 GEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSI 357

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           L  + K  ++D A  +   M  K+  PN+ TY+ +ID    AGR+++A  +  EM+  G+
Sbjct: 358 LTCLGKKRKVDEALTLFDVM-KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGL 416

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             + +S N ++    K  + EEA  + +     G   ++VTY +L+ G GK+GK D+  R
Sbjct: 417 FPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYR 476

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +FE+M       N + Y++LI  +   G  ++  +I++E  + G + D+ L +  +D + 
Sbjct: 477 LFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVF 536

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           K G VE   ++ ++M   G  P+V +Y+ +I    ++              G+ +E++N+
Sbjct: 537 KAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKA--------------GQARETSNI 582

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
               SQ    +    R  N ++         K+G+  K             V ++M    
Sbjct: 583 FQAMSQQGFALD--ARAYNAVVDGLC-----KSGKVDKAYE----------VLEEMKVKH 625

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           + P V T+ +I++  ++ +  ++A ML EE +
Sbjct: 626 VHPTVATYGSIVDGLAKIDRLDEAYMLFEEAK 657



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 194/383 (50%), Gaps = 8/383 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+R     G      + +   ++R  R +    L +  +  + + G+V+  + IFE 
Sbjct: 493 YTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPD--LTLLNTYMDCVFKAGEVEKGRAIFED 550

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
             + G+   V ++S LI    ++G  +E  ++F +M +     +   YNAV+D  C  G 
Sbjct: 551 MKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGK 610

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           VD  +  E+ ++M    V P   T+ S++   ++    + A  LF E   +GI+ ++  Y
Sbjct: 611 VDKAY--EVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILY 668

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           ++L+D   K  ++D A+ I+ EM  K ++PNV T+++++D   K   +D+AL  F  MK 
Sbjct: 669 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKE 728

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           +    +  +Y+ +++   ++ ++ +A +  +EM+  G+  + VTY  ++ G  K G   +
Sbjct: 729 MKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITD 788

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +FE+ K +   P+  +++ LI+  S      EA Q+F E +  G + +V    +L+D
Sbjct: 789 AYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLD 848

Query: 518 ALCKNGLVESAV---SLLDEMTK 537
           AL K   +E A    ++L E+ K
Sbjct: 849 ALNKTECLEQAAIVGAVLSEIAK 871



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 96/412 (23%), Positives = 177/412 (42%), Gaps = 47/412 (11%)

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           YNAV+        D   + ++ ++M   G         +L+A   R    E A  +   M
Sbjct: 111 YNAVLPFLSH---DLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAM 167

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
            H         Y  L+ A+ +  Q + A E++ +M       +V  ++T++   A+ G++
Sbjct: 168 RHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQM 227

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           + AL +  E+K   +  D V YN  +  + K G  + A     E+++ G+R D V+Y ++
Sbjct: 228 EPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSM 287

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +    K G+  E   +F QM+A+   P    Y+T+I  Y     + +A ++    ++ G 
Sbjct: 288 VWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGC 347

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTEC 562
              VV +++++  L K   V+ A++L D M K+  +PN+ TYN IID     GR      
Sbjct: 348 IPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYNIIIDMLCMAGRVNEAYK 406

Query: 563 TVDDVE-RDLGKQKESANL--DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
             D++E   L     S N+  D +C                           KA Q ++ 
Sbjct: 407 IRDEMELAGLFPNLLSVNIMVDRLC---------------------------KANQLEEA 439

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +R          +F+   +    PN VT+ ++++   +    +DA  L E++
Sbjct: 440 HR----------IFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKM 481



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/350 (22%), Positives = 148/350 (42%), Gaps = 42/350 (12%)

Query: 406 SYNTVLSIYA-KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           +YN VL   +  L   E+ L   +EM   G         AL+    +  + ++  R+   
Sbjct: 110 AYNAVLPFLSHDLAALEKVL---EEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGA 166

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M+     P    Y+ LI   ++    + A+++ R+ +  G +  V L++ L+ AL + G 
Sbjct: 167 MRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQ 226

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           +E A++L+DE+    + P++V YN  ID FG++ + +                     M 
Sbjct: 227 MEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVD---------------------MA 265

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ-GKKENRCRQEILCILGVFQKMHKLKIKP 643
            +   +++  G   + +       V  KAG+ G+ E            +F +M   +  P
Sbjct: 266 WKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEE-----------LFGQMEAERDVP 314

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGYRDNIWVQALSL 700
               ++ ++        F+DA  LLE LR      + V   +    +G +  +  +AL+L
Sbjct: 315 CAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKV-DEALTL 373

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
           FD +K  D+    + YN + DML   G+   A  +  E +   ++ N+ S
Sbjct: 374 FDVMK-KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLS 422


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 199/357 (55%), Gaps = 7/357 (1%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K   A  + +  + +G    +  +  +++   + G    A  + N M++  L+P ++ Y 
Sbjct: 201 KASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYT 260

Query: 268 AVIDACGKGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
            +ID   K     KH+   + +F +M   G++P+ +T++SL++     G W  A  L ++
Sbjct: 261 TIIDGLCKN----KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+ R I+ D+FT++ L+DA  K  ++  A ++  EM  ++I P++VTYS++I+G+    R
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD+A  MF  M       D VSY+T++  + K  R +E + + +EM   G+  + VTY  
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G  + G  D  + +F++M +D V PN++TY+TL+D   K G  ++AM +F   +++ 
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           ++  +  Y+ +I+ +CK G VE    L   ++ +G++P+VV YN++I  F R  + E
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 242/495 (48%), Gaps = 35/495 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++S + ++ K D+  ++ E   N G  +  Y +S LI+ + R      A++V   M +
Sbjct: 85  SKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 144

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              +PN+VT +++++  C    +     V + D M   G QP+ +TFN+L+         
Sbjct: 145 LGYEPNIVTLSSLLNGYCHSKRI--SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  L + MV +G   D+ TY  +++ +CK    DLAF ++ +M    + P V+ Y+T+
Sbjct: 203 SEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTI 262

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K   +DDALN+F EM+  GI  + V+Y++++S     GR+ +A  +  +M    I
Sbjct: 263 IDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  T++AL+  + K+GK  E  +++++M    + P+++TYS+LI+ +       EA Q
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F          DVV YS LI   CK   V+  + L  EM++ G+  N VTY ++I    
Sbjct: 383 MFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLF 442

Query: 556 RSATTECTVDDVERDLGKQKESAN-----------LDAMCSQDDKDVQEAGRTDNQIIKV 604
           ++   +C   D+ +++ K+  S             LD +C          G+ +  ++ V
Sbjct: 443 QAG--DC---DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN--------GKLEKAMV-V 488

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSR 657
           F  L   K            E +C  G       +F  +    +KP+VV ++ +++   R
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548

Query: 658 CNSFEDASMLLEELR 672
             S E+A  L +E++
Sbjct: 549 KGSKEEADALFKEMK 563



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 194/367 (52%), Gaps = 3/367 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G  DLA  +            V  ++ +I    ++ +  +A+++F  M+   ++PN
Sbjct: 231 LCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPN 290

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +VTY+++I   C  G   +     +  DM+   + PD  TF++L+    + G    A  L
Sbjct: 291 VVTYSSLISCLCNYG--RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           ++EMV R ID  I TY++L++  C   ++D A ++   M +K+  P+VV+YST+I G+ K
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCK 408

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           A R+D+ + +F EM   G+  + V+Y T++    + G  + A  + KEM S G+  + +T
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN LL G  K GK ++   +FE ++   + P + TY+ +I+   K G  ++   +F    
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G+K DVV Y+ +I   C+ G  E A +L  EM ++G  PN   YN++I A  R    E
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588

Query: 562 CTVDDVE 568
            + + ++
Sbjct: 589 ASAELIK 595



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 201/390 (51%), Gaps = 7/390 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           Y  ++  L  RG+   A   F    K E+ K + G L  + +I  L +   +D A N+F+
Sbjct: 224 YGVVVNGLCKRGDTDLA---FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFK 280

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
               +G    V  +S+LIS     G   +A  + + M    + P++ T++A+IDA  K G
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
                  +++D+M++  + P  +T++SL+   C    L EA + +F  MV +    D+ +
Sbjct: 341 -KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA-KQMFEFMVSKHCFPDVVS 398

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y+TL+   CK  ++D   E+  EM  + +  N VTY+T+I G  +AG  D A  +F EM 
Sbjct: 399 YSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMV 458

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  + ++YNT+L    K G+ E+A++V + ++ S +     TYN ++ G  K GK +
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           +   +F  +    V P+++ Y+T+I  + + G  +EA  +F+E K+ G   +   Y+ LI
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            A  ++G  E++  L+ EM   G   +  T
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFAGDAST 608



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 208/429 (48%), Gaps = 41/429 (9%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           V +F +M+++   P  I F+ LL+  ++   ++   +L  +M + G+  + +TY+ L++ 
Sbjct: 66  VALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINC 125

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C+ +Q+ LA  ++ +M      PN+VT S++++GY  + R+ +A+ +  +M   G   +
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V++NT++       +  EA+ +   M + G + D VTY  ++ G  K+G  D    +  
Sbjct: 186 TVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLN 245

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M+   + P +L Y+T+ID   K     +A+ +F+E +  G++ +VV YS+LI  LC  G
Sbjct: 246 KMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVER---DLGKQKES 577
               A  LL +M +  I P+V T++++IDAF   G+    E   D++ +   D      S
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365

Query: 578 ANLDAMCSQDDKD---------VQEAGRTD----NQIIKVFG---------QLVAEKAGQ 615
           + ++  C  D  D         V +    D    + +IK F          +L  E + +
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQR 425

Query: 616 GKKENRCRQEILCILGVFQ------------KMHKLKIKPNVVTFSAILNACSRCNSFED 663
           G   N      L I G+FQ            +M    + PN++T++ +L+   +    E 
Sbjct: 426 GLVGNTVTYTTL-IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484

Query: 664 ASMLLEELR 672
           A ++ E L+
Sbjct: 485 AMVVFEYLQ 493


>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 248/492 (50%), Gaps = 10/492 (2%)

Query: 95  DFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLC 154
           DF G+ S   V KM     K A   R  V   + L       + +  + D+L   + ++ 
Sbjct: 96  DFLGKTSKNRVKKMTKLALKRAKDWRQRV---QFLTDRILGLKSEEFVADVLDDRKVQMT 152

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
              D+ F+++ +G +  W +A++ + +   R     +   LA+ ++S+LG+  +  LA  
Sbjct: 153 -PTDFCFVVKWVG-QSSWQRALEVYEWLNLRHWYSPNARMLAT-ILSVLGKANQEALAVE 209

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           IF  A     GNTV  ++A++  Y R+G   +   + + M+    +P+LV++N +I+A  
Sbjct: 210 IFARA-EAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARL 268

Query: 275 KGGVDFKHV-VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           K G    ++ +E+ +++ R+G+QPD IT+N+L++ CSR    E A  ++N+MV      D
Sbjct: 269 KSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPD 328

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++TYN ++    +      A  +  ++ +K   P+ VTY++++  +A+ G +D    +  
Sbjct: 329 LWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICE 388

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           +M  +G G D ++YNT++ +Y K G+ + A  +  +M+ SG   DAVTY  L+   GK  
Sbjct: 389 DMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKAN 448

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
              E   +  +M    V P L T+S LI  Y+K G   EA + F    ++G+K D + YS
Sbjct: 449 MIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYS 508

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            ++D L +      A+ L  EM     +P+   Y  ++   G+    E  V  V +D+ +
Sbjct: 509 VMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREE-DVHKVVKDM-E 566

Query: 574 QKESANLDAMCS 585
           +    N   +CS
Sbjct: 567 ELCGMNSQVICS 578



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 148/672 (22%), Positives = 289/672 (43%), Gaps = 84/672 (12%)

Query: 246  EAISVFNSMKRYNLKPNLVTYNA-VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
            EA  +F+ M+ Y ++P+   Y + V+  C  G  +  H   + D     G+  D ++ ++
Sbjct: 694  EASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHY--LIDQAEEKGLLFDDVSIHT 751

Query: 305  -LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
             ++    +  LW+ A +L   +  +    D   +N L+ A       + A  I   M   
Sbjct: 752  GVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRD 811

Query: 364  NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
              SP V + + ++      GRLD+   +  E++ +G  + + S   +L  +A  G   E 
Sbjct: 812  GPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEV 871

Query: 424  LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
              + + M+++G       Y  ++G   K  +  +V  M  +M+     P+L  +++++ +
Sbjct: 872  KKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKL 931

Query: 484  YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            Y+  G +K+  Q+++  ++AGLK D   Y+ LI   C++   E  +SL+ EM + G+ P 
Sbjct: 932  YTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPK 991

Query: 544  VVTYNSIIDAFGRSA-------------TTECTVD--------DVERDLGKQKESANLDA 582
            + TY S+I AFG+               + EC +D         + R+ G   ++  L  
Sbjct: 992  LDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLG 1051

Query: 583  MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV---------- 632
            +       ++EAG      I     L+   +G G+ E    +++L  L V          
Sbjct: 1052 V-------MKEAGV--EPTIATMHLLMVSYSGSGQPEE--AEKVLDNLKVEGLPLSTLPY 1100

Query: 633  ----------------FQKMHKLK---IKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
                             QK+ ++K   ++P+   ++  + A S      +A +LL+ LR 
Sbjct: 1101 SSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALR- 1159

Query: 674  FDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
              +  + +   LL    D++  +  +  +++  ++ + A  F NAL D+LW F  +  A 
Sbjct: 1160 --DTGFDLPIRLLTEKSDSLVSEVDNCLEKLGPLEDNAAFNFVNALEDLLWAFELRATAS 1217

Query: 734  LVVLEGKRRQVW--------ENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHEL 785
             V     +R ++        E  W     D   MS+G+A   +  WL ++     +G+ L
Sbjct: 1218 WVFQLAVKRSIYRHDVFRVAEKDWGA---DFRKMSAGSALVGLTLWLDHMQDASLQGYPL 1274

Query: 786  -PKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLR 844
             PK + ++TG  +++ V    +L   ++  L  MG+PF       G  ++    +  WL+
Sbjct: 1275 SPKSVVLITGTAEYNMV----SLNSTLKAFLWEMGSPFLPCKTRSGLLVAKAHSLRMWLK 1330

Query: 845  ESGTLKVLVLHD 856
            +S     L L D
Sbjct: 1331 DSSFCLDLELKD 1342



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 157/312 (50%), Gaps = 5/312 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS   R   ++ A  ++   +       ++ ++A+IS YGR G  +EA  +F  ++ 
Sbjct: 298 NTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLES 357

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+ VTYN+++ A  + G +   V EI +DM++ G   D +T+N+++ +  + G  +
Sbjct: 358 KGFLPDAVTYNSLLYAFAREG-NVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHD 416

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L+++M   G   D  TY  L+D++ K   +  A E+M+EM    + P + T+S +I
Sbjct: 417 LAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALI 476

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            GYAKAG+  +A   F  M   GI  D ++Y+ +L I  +     +A+ + +EM     +
Sbjct: 477 CGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFK 536

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D   Y  +L   GK+ + ++V ++ + M+  C   + +  S L+    KG  +  A  +
Sbjct: 537 PDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILV----KGECFDHAANM 592

Query: 497 FREFKQAGLKAD 508
            R     G + D
Sbjct: 593 LRLAISQGCELD 604



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 180/392 (45%), Gaps = 42/392 (10%)

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVV-TYSTMIDGYAKAGRLDDALNMFSEMKF 397
           T+L  + K  Q  LA EI A   A+  S N V  Y+ M+  YA+ GR      +   M+ 
Sbjct: 193 TILSVLGKANQEALAVEIFAR--AEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRS 250

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEE--ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
            G   D VS+NT+++   K G      A+ +  E+  SGI+ D +TYN L+    ++   
Sbjct: 251 RGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNL 310

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           +E  +++  M A    P+L TY+ +I VY + G+ +EA ++F++ +  G   D V Y++L
Sbjct: 311 EEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSL 370

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           + A  + G V+    + ++M K G   + +TYN+II  +G+           + DL  Q 
Sbjct: 371 LYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRG---------QHDLAFQL 421

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
            S            D++ +GR+ + +      ++ +  G+        +       V  +
Sbjct: 422 YS------------DMKLSGRSPDAVTYT---VLIDSLGKANMIKEAAE-------VMSE 459

Query: 636 MHKLKIKPNVVTFSAIL----NACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRD 691
           M   ++KP + TFSA++     A  R  + E    +L      D+  Y V   +L+ + +
Sbjct: 460 MLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNE 519

Query: 692 NIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
           +   +A+ L+ E+ L       A Y  +  +L
Sbjct: 520 S--GKAMKLYQEMVLHSFKPDHALYEVMLRVL 549



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 181/408 (44%), Gaps = 7/408 (1%)

Query: 194  KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
            K+ +A+I      G  + A+ IF T + +G   TV + + L+ A    G   E   V   
Sbjct: 783  KVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQE 842

Query: 254  MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            ++    K +  +   ++DA    G  F+ V +I+  M   G  P    +  ++ + ++G 
Sbjct: 843  LQDMGFKISKSSITLMLDAFAHAGNIFE-VKKIYQGMKAAGYFPTMHLYRIMIGLLAKGK 901

Query: 314  LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
                   + +EM       D+  +N++L             ++   +    + P+  TY+
Sbjct: 902  RVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYN 961

Query: 374  TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            T+I  Y +  R ++ L++  EM+ +G+     +Y +++S + KL   E+A  + + + S 
Sbjct: 962  TLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSK 1021

Query: 434  GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
              + D   Y+ ++  +   G + +  ++   MK   V P + T   L+  YS  G  +EA
Sbjct: 1022 ECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEA 1081

Query: 494  MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             ++    K  GL    + YS++IDA  KNG    A+  L EM K+G+ P+   +   + A
Sbjct: 1082 EKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRA 1141

Query: 554  FGRSA-TTECTV-----DDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
               S  T+E  V      D   DL  +  +   D++ S+ D  +++ G
Sbjct: 1142 ASLSQHTSEAIVLLKALRDTGFDLPIRLLTEKSDSLVSEVDNCLEKLG 1189


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 230/455 (50%), Gaps = 15/455 (3%)

Query: 129 LHHVTAFARDDVSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKRE 186
           L+HV      D S+  + K F+  +   D  TF  L+  L N G+  +A++ F   VKR 
Sbjct: 141 LNHV------DFSVSVLGKMFKLGI-HPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 187 ERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQE 246
              N      + +I+ L + G   +A ++F+     G    V  +S +I +  +     +
Sbjct: 194 HEPNVIS--YTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVND 251

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A+   + M    + PN+ TYN+++   C  G ++      +F +M+   V P+ +TF  L
Sbjct: 252 AMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLN--EATRLFKEMVGRDVMPNTVTFTIL 309

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    + G+   AR +F  M  +G++ DI TYN L+D  C    M+ A ++   M  K  
Sbjct: 310 VDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGC 369

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           +P   +Y+ +I+GY K+ R+D+A ++ +EM    +  D V+Y+T++    +LGR +EAL 
Sbjct: 370 APGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALN 429

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + KEM S G   + VTY  LL G+ K G  DE  ++ + MK   + PN++ Y+ LI+   
Sbjct: 430 LFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMF 489

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
             G  + A ++F +    G + D+  Y+ +I  L K GL + A  L  +M  +G  PN  
Sbjct: 490 IAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSC 549

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           +YN +I  F ++  +   +  ++  +GK + S NL
Sbjct: 550 SYNVMIQGFLQNQDSSTAIRLIDEMVGK-RFSVNL 583



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 189/355 (53%), Gaps = 1/355 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+ L RL  VD + ++       G       F+ALI+     G  +EA+ +FN M +  
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +PN+++Y  VI+   K G +    V++F  M +NG +P+ +T+++++    +  L   A
Sbjct: 194 HEPNVISYTTVINGLCKTG-NTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDA 252

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
               +EMV RGI  ++FTYN+++   C   Q++ A  +  EM  +++ PN VT++ ++DG
Sbjct: 253 MEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDG 312

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K G + +A  +F  M   G+  D  +YN ++  Y       EA  V + M   G    
Sbjct: 313 LCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPG 372

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           A +YN L+ GY K  + DE + +  +M    ++P+ +TYSTL+    + G  KEA+ +F+
Sbjct: 373 AHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFK 432

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           E    G   ++V Y  L+D  CK+G ++ A+ LL  M ++ + PN+V Y  +I+ 
Sbjct: 433 EMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEG 487



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 182/330 (55%), Gaps = 3/330 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           VY+ + LI+   R  +   ++SV   M +  + P+ +T+NA+I+  C +G +  K  VE+
Sbjct: 128 VYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKI--KEAVEL 185

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F++M++ G +P+ I++ +++    + G    A ++F +M   G   ++ TY+T++D++CK
Sbjct: 186 FNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCK 245

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              ++ A E ++EM  + I PNV TY++++ G+   G+L++A  +F EM    +  + V+
Sbjct: 246 DRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVT 305

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +  ++    K G   EA LV + M   G+  D  TYNAL+ GY  Q   +E +++FE M 
Sbjct: 306 FTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMI 365

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
               +P   +Y+ LI+ Y K     EA  +  E     L  D V YS L+  LC+ G  +
Sbjct: 366 RKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPK 425

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            A++L  EM   G  PN+VTY  ++D F +
Sbjct: 426 EALNLFKEMCSYGPHPNLVTYVILLDGFCK 455



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 187/362 (51%), Gaps = 20/362 (5%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
           +V  F   + ++ +       +S+ N M  + +  N+ + N +I+  C    VDF   V 
Sbjct: 92  SVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFS--VS 149

Query: 286 IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +   M + G+ PD ITFN+L+  +C+ G + EA   LFNEMV RG + ++ +Y T+++ +
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVE-LFNEMVKRGHEPNVISYTTVINGL 208

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK     +A ++  +M      PNVVTYST+ID   K   ++DA+   SEM   GI  + 
Sbjct: 209 CKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNV 268

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +YN+++  +  LG+  EA  + KEM    +  + VT+  L+ G  K+G   E R +FE 
Sbjct: 269 FTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFET 328

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    V P++ TY+ L+D Y    L  EA ++F    + G       Y+ LI+  CK+  
Sbjct: 329 MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRR 388

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAM 583
           ++ A SLL EM  + + P+ VTY++++    +              LG+ KE+ NL   M
Sbjct: 389 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ--------------LGRPKEALNLFKEM 434

Query: 584 CS 585
           CS
Sbjct: 435 CS 436



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 144/268 (53%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F  M+R   +P  + F   L   ++   +    +L N+M    +  ++++ N L++ +C+
Sbjct: 81  FYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCR 140

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +D +  ++ +M    I P+ +T++ +I+G    G++ +A+ +F+EM   G   + +S
Sbjct: 141 LNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVIS 200

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y TV++   K G    A+ V K+ME +G + + VTY+ ++    K    ++      +M 
Sbjct: 201 YTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMV 260

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + PN+ TY++++  +   G   EA ++F+E     +  + V ++ L+D LCK G+V 
Sbjct: 261 ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVS 320

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            A  + + MT++G+ P++ TYN+++D +
Sbjct: 321 EARLVFETMTEKGVEPDISTYNALMDGY 348



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 162/338 (47%), Gaps = 5/338 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  ++    N G+ ++A + F   V R+   N      + ++  L + G V  A+ +FET
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVT--FTILVDGLCKEGMVSEARLVFET 328

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
              +G    +  ++AL+  Y       EA  VF  M R    P   +YN +I+  C    
Sbjct: 329 MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRR 388

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D      +  +M    + PD +T+++L+    + G  + A NLF EM   G   ++ TY
Sbjct: 389 MD--EAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTY 446

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             LLD  CK   +D A +++  M  K + PN+V Y+ +I+G   AG+L+ A  +FS++  
Sbjct: 447 VILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFG 506

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   D  +Y  ++    K G  +EA  + ++ME  G   ++ +YN ++ G+ +      
Sbjct: 507 DGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSST 566

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             R+ ++M     S NL T+  L+D+ S+  +  + M+
Sbjct: 567 AIRLIDEMVGKRFSVNLSTFQMLLDLESQDEIISQFMR 604



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 116/250 (46%), Gaps = 24/250 (9%)

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R   V +   LG + K+ +Y  V  +  QM    V+ N+ + + LI+   +      ++ 
Sbjct: 90  RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVS 149

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +  +  + G+  D + ++ALI+ LC  G ++ AV L +EM K G  PNV++Y ++I+   
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLC 209

Query: 556 RSATTECTVD---DVERDLGKQK---ESANLDAMCSQDDKDVQEAGRTDNQIIK------ 603
           ++  T   VD    +E++  K      S  +D++C   D+ V +A    +++++      
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCK--DRLVNDAMEFLSEMVERGIPPN 267

Query: 604 --VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
              +  +V      G+     R        +F++M    + PN VTF+ +++   +    
Sbjct: 268 VFTYNSIVHGFCNLGQLNEATR--------LFKEMVGRDVMPNTVTFTILVDGLCKEGMV 319

Query: 662 EDASMLLEEL 671
            +A ++ E +
Sbjct: 320 SEARLVFETM 329


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 231/469 (49%), Gaps = 21/469 (4%)

Query: 101 STRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYT 160
           S R  S+M      I+ ++ H +++  AL    AFA       D+ +     LC    + 
Sbjct: 441 SLRLYSRMKSLSLPISTASLHPLLS--ALPSAPAFAL----FADMFR-LRLPLC-TTTFN 492

Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF-ETA 219
            +LR L + G+ ++A++     +++  R N      + +I+     G+V  A +I  E  
Sbjct: 493 IMLRHLCSAGKPARALEL----LRQMPRPN--AVTYNTVIAGFCSRGRVQAALDIMREMR 546

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVTYNAVIDA-CGKGG 277
              G     Y +  +IS + + G   EA+ VF+ M  +  +KP  V YNA+I   C +G 
Sbjct: 547 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 606

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D   +    D M+  GV     T+N L+      G    A  L  EM  +G+  D+FTY
Sbjct: 607 LDTALLYR--DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 664

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L++  CK   +  A EI   M  + +   VVTY+ +I   +K G++ +   +F E   
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 724

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI  D V YN +++ ++  G  + A  +  EME   I  D VTYN L+ G    G+ DE
Sbjct: 725 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 784

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            R++ ++M    + P+L+TY+TLI  YS  G  K+A++I  E    G    ++ Y+ALI 
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 844

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            LCKNG  + A +++ EM + GI P+  TY S+I+  G +   E  +DD
Sbjct: 845 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE--GLTTEDERAIDD 891



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 189/396 (47%), Gaps = 53/396 (13%)

Query: 286 IFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +F DM R  +     TFN +L  +CS G   + AR L  E++ +    +  TYNT++   
Sbjct: 475 LFADMFRLRLPLCTTTFNIMLRHLCSAG---KPARAL--ELLRQMPRPNAVTYNTVIAGF 529

Query: 345 CKGAQMDLAFEIMAEMPAKN-ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG-IGL 402
           C   ++  A +IM EM  +  I+PN  TY T+I G+ K GR+D+A+ +F EM   G +  
Sbjct: 530 CSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 589

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           + V YN ++  Y   G+ + ALL    M   G+     TYN L+      G+  E   + 
Sbjct: 590 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 649

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           E+M    ++P++ TY+ LI+ + K G  K+A++IF    + G++A VV Y+ALI AL K 
Sbjct: 650 EEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKK 709

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           G V+    L DE  + GIRP++V YN++I++                       S N+D 
Sbjct: 710 GQVQETDKLFDEAVRRGIRPDLVLYNALINS--------------------HSTSGNID- 748

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL--- 639
                            +  ++ G++  ++              LC+LG   +  KL   
Sbjct: 749 -----------------RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 791

Query: 640 ----KIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                I+P++VT++ +++  S     +DA  +  E+
Sbjct: 792 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 827



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 130/286 (45%), Gaps = 39/286 (13%)

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +F++M  L + L   ++N +L      G+   AL + ++M     R +AVTYN ++ 
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 527

Query: 448 GYGKQGKYDEVRRMFEQMKA-DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG-L 505
           G+  +G+      +  +M+    ++PN  TY T+I  + K G   EA+++F E    G +
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           K + V+Y+ALI   C  G +++A+   D M + G+   V TYN ++ A            
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD-------- 639

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQE-AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                 G+  E+  L          V+E  G+     +  +  L+     +G  +     
Sbjct: 640 ------GRGTEAYEL----------VEEMGGKGLAPDVFTYNILINGHCKEGNVKK---- 679

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                L +F+ M +  ++  VVT++A++ A S+    ++   L +E
Sbjct: 680 ----ALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 721


>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
 gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
          Length = 786

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 152/600 (25%), Positives = 269/600 (44%), Gaps = 45/600 (7%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF- 216
           D   LL+ L   G W  A+    +A    E   D   L   ++  LGR G+ D    +  
Sbjct: 105 DIPSLLKALELSGHWEWALALLRWA--GAEGAADASAL-EMVVRALGREGQHDAVCALLD 161

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           E  L  G    V A++ ++ A  R+G  + A+ +F  ++R  + P LVTYN V+D  G+ 
Sbjct: 162 EMPLPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRM 221

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G  +  +V + D+M   GV+PD  T ++++A C R GL + A   F ++  RG    + T
Sbjct: 222 GRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVT 281

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN LL    K      A  ++ EM      P+ VTY+ +   YA+AG  ++A      M 
Sbjct: 282 YNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMT 341

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  +  +YNTV++ Y  +G+ +EAL +  +M+ SG   +  TYN +LG  GK+ ++ 
Sbjct: 342 SKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFT 401

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
            +  M  +M     +PN +T++T++ V  K G+     ++    K  G++     Y+ LI
Sbjct: 402 VMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLI 461

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS---ATTECTVDDVE-RDLG 572
            A  + G   +A  + +EMT  G  P + TYN++++   R    +T +  V  +  +   
Sbjct: 462 AAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFK 521

Query: 573 KQKESANLDAMCSQDDKDVQEAGRTDNQII--KVFGQLVAEKAGQGKKENRCRQEILCIL 630
              +S +L   C     ++      + ++    VF   V  +        +CR+ +  I 
Sbjct: 522 PNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRT-LVIANFKCRR-LGGIE 579

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYR 690
             FQ++      P++V F+++L+                                 M  +
Sbjct: 580 KAFQEVKARGYNPDLVIFNSMLS---------------------------------MYAK 606

Query: 691 DNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
           + ++ +   +FD +K    S     YN+L DM     +   A+ ++ + K  QV  +V S
Sbjct: 607 NGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVS 666



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 221/437 (50%), Gaps = 48/437 (10%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           Y  LL+  G  G +++A++     +K  E+   Q    +   +     R G  + A    
Sbjct: 282 YNALLQVFGKAGNYTEALR----VLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCL 337

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           +T  ++G     + ++ +++AYG  G   EA+++F+ MK+    PN+ TYN ++   GK 
Sbjct: 338 DTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKK 397

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
              F  ++E+  +M R+G  P+R+T+N++LAVC + G+ +    +   M   G++    T
Sbjct: 398 S-RFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDT 456

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YNTL+ A  +      AF++  EM +   +P + TY+ +++  ++ G    A ++ S+M+
Sbjct: 457 YNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMR 516

Query: 397 FLGIGLDRVSYNTVLSIYAK--------------------------------------LG 418
             G   +  SY+ +L  YAK                                      LG
Sbjct: 517 TKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLG 576

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
             E+A    +E+++ G   D V +N++L  Y K G Y +V  +F+ +K   +SP+L+TY+
Sbjct: 577 GIEKAF---QEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYN 633

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           +L+D+Y+K     EA +I  + K + +K DVV Y+ +I+  CK GL++ A  +L EM  +
Sbjct: 634 SLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD 693

Query: 539 GIRPNVVTYNSIIDAFG 555
           G+ P VVTY++++  + 
Sbjct: 694 GMAPCVVTYHTLVGGYA 710



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 216/481 (44%), Gaps = 50/481 (10%)

Query: 123 VVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFA 180
           VV   AL  V   A +      +LK+ E   C  D  T+  L       G + +A +C  
Sbjct: 279 VVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCL- 337

Query: 181 FAVKREERKNDQGKLASA-----MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALI 235
                 +    +G L +A     +++  G +GKVD A  +F+     G    V  ++ ++
Sbjct: 338 ------DTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFIL 391

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV 295
              G+       + +   M R    PN VT+N ++  CGK G++  +V  + + M   GV
Sbjct: 392 GMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGME-DYVTRVLEGMKSCGV 450

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +  R T+N+L+A   R G    A  ++NEM   G    + TYN LL+ + +      A  
Sbjct: 451 ELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQS 510

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAG-------------------------------- 383
           I+++M  K   PN  +YS ++  YAK G                                
Sbjct: 511 IVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANF 570

Query: 384 ---RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
              RL      F E+K  G   D V +N++LS+YAK G + +   +   ++ SG+  D +
Sbjct: 571 KCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLI 630

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TYN+L+  Y K  +  E  ++  Q+K+  V P++++Y+T+I+ + K GL KEA +I  E 
Sbjct: 631 TYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 690

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
              G+   VV Y  L+       +   A  +++ M +  ++P  +TY  ++D++ ++   
Sbjct: 691 IADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSYCKAKRF 750

Query: 561 E 561
           E
Sbjct: 751 E 751



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 186/381 (48%), Gaps = 3/381 (0%)

Query: 157 DDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF 216
           + Y F+L  LG +  ++  ++      +     N      + M+++ G+ G  D    + 
Sbjct: 385 NTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRV--TWNTMLAVCGKRGMEDYVTRVL 442

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           E   + G   +   ++ LI+AYGR G    A  ++N M      P L TYNA+++   + 
Sbjct: 443 EGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQ 502

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G D+     I   M   G +P+  +++ LL   ++GG       +  E+    +      
Sbjct: 503 G-DWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVI 561

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
             TL+ A  K  ++    +   E+ A+  +P++V +++M+  YAK G       +F  +K
Sbjct: 562 LRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIK 621

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  D ++YN+++ +YAK     EA  +  +++SS ++ D V+YN ++ G+ KQG   
Sbjct: 622 QSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIK 681

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E +R+  +M AD ++P ++TY TL+  Y+   ++ EA ++     Q  LK   + Y  ++
Sbjct: 682 EAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVV 741

Query: 517 DALCKNGLVESAVSLLDEMTK 537
           D+ CK    E A S L E+++
Sbjct: 742 DSYCKAKRFEEARSFLSEVSE 762



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 221/498 (44%), Gaps = 49/498 (9%)

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
           SLL      G WE A  L       G   D      ++ A+ +  Q D    ++ EMP  
Sbjct: 108 SLLKALELSGHWEWALALLRWAGAEGA-ADASALEMVVRALGREGQHDAVCALLDEMPLP 166

Query: 364 NISP-NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR-FE 421
             S  +V  Y+T++   ++AGR + A+ +F+E++  G+    V+YN VL +Y ++GR + 
Sbjct: 167 PGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWP 226

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
             + +  EM ++G+  D  T + ++    + G  DE    FE +KA   +P ++TY+ L+
Sbjct: 227 RIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALL 286

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
            V+ K G Y EA+++ +E +Q G + D V Y+ L     + G  E A   LD MT +G+ 
Sbjct: 287 QVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLL 346

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
           PN  TYN+++ A+G        VD+      + K+S  +  +             T N I
Sbjct: 347 PNAFTYNTVMTAYGNIGK----VDEALALFDQMKKSGCVPNV------------NTYNFI 390

Query: 602 IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
           + + G+               +     +L +  +M +    PN VT++ +L  C +    
Sbjct: 391 LGMLGK---------------KSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGME 435

Query: 662 EDASMLLEELRLFDNQVYGVAHGLLM------GYRDNIWVQALSLFDEVKLMDSSTASAF 715
           +  + +LE ++    ++    +  L+      G R N    A  +++E+     +     
Sbjct: 436 DYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTN----AFKMYNEMTSAGFAPCLTT 491

Query: 716 YNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNI 775
           YNAL ++L   G    AQ +V + + +    N  S S L L   + G   A + A    I
Sbjct: 492 YNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLL-LQCYAKGGNIAGIDA----I 546

Query: 776 HSIVFEGHELPKLLSILT 793
              V+ G   P  + + T
Sbjct: 547 EKEVYGGTVFPSWVILRT 564



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 116/218 (53%), Gaps = 8/218 (3%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           RLG ++ A   F+     GY   +  F++++S Y ++G   +   +F+S+K+  L P+L+
Sbjct: 574 RLGGIEKA---FQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLI 630

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TYN+++D   K    ++   +I + +  + V+PD +++N+++    + GL + A+ + +E
Sbjct: 631 TYNSLMDMYAKCSESWE-AEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSE 689

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+  G+   + TY+TL+           A E++  M   N+ P  +TY  ++D Y KA R
Sbjct: 690 MIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSYCKAKR 749

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIY---AKLGR 419
            ++A +  SE+       D+   +T L+ Y   A+ GR
Sbjct: 750 FEEARSFLSEVSETDPNFDKKVLHT-LAAYIEDAQFGR 786


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/495 (27%), Positives = 230/495 (46%), Gaps = 35/495 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S MI+   R  K+ LA +     +  GY      FS LI+     G   EA+ + + M  
Sbjct: 225 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 284

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              KP+L+T N +++     G + + ++ + D M+  G QP+ +T+  +L V  + G   
Sbjct: 285 MGHKPDLITINTLVNGLCLSGKEAEAML-LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 343

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L  +M  R I  D   Y+ ++D +CK   +D AF +  EM  K I+ N++TY+ +I
Sbjct: 344 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 403

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+  AGR DD   +  +M    I  + V+++ ++  + K G+  EA  + KEM   GI 
Sbjct: 404 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 463

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +TY +L+ G+ K+   D+  +M + M +    PN+ T++ LI+ Y K     + +++
Sbjct: 464 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 523

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           FR+    G+ AD V Y+ LI   C+ G +  A  L  EM    + PN+VTY  ++D    
Sbjct: 524 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 583

Query: 557 SATTECTVDDVER--------DLG-----------KQKESANLDAMCSQDDKDVQEAGRT 597
           +  +E  ++  E+        D+G             K     D  CS   K V+   +T
Sbjct: 584 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 643

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
            N +I           G  KK      E+L     F+KM +    P+  T++ ++ A   
Sbjct: 644 YNIMI----------GGLCKKGPLSEAELL-----FRKMEEDGHAPDGWTYNILIRAHLG 688

Query: 658 CNSFEDASMLLEELR 672
                 +  L+EEL+
Sbjct: 689 DGDATKSVKLIEELK 703



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 184/371 (49%), Gaps = 4/371 (1%)

Query: 184 KREER--KNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
           K EER  K D  K  S +I  L + G +D A N+F     +G    +  ++ LI  +  +
Sbjct: 351 KMEERNIKLDAVKY-SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 409

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
           G   +   +   M +  + PN+VT++ +ID+  K G   +   E+  +M+  G+ PD IT
Sbjct: 410 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEG-KLREAEELHKEMIHRGIAPDTIT 468

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           + SL+    +    + A  + + MV +G D +I T+N L++  CK  ++D   E+  +M 
Sbjct: 469 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 528

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            + +  + VTY+T+I G+ + G+L+ A  +F EM    +  + V+Y  +L      G  E
Sbjct: 529 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 588

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           +AL + +++E S +  D   YN ++ G     K D+   +F  +    V P + TY+ +I
Sbjct: 589 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 648

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
               K G   EA  +FR+ ++ G   D   Y+ LI A   +G    +V L++E+ + G  
Sbjct: 649 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 708

Query: 542 PNVVTYNSIID 552
            +  T   +ID
Sbjct: 709 VDASTIKMVID 719



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 227/521 (43%), Gaps = 79/521 (15%)

Query: 276 GGVDFK--HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G VD K    +++F DM+ +   P  I F+ L +  ++   ++    L  +M  +GI  +
Sbjct: 161 GLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHN 220

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++T + +++  C+  ++ LAF  M ++      PN +T+ST+I+G    GR+ +AL +  
Sbjct: 221 LYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVD 280

Query: 394 EMKFLGIGLDRVSYNT-----------------------------------VLSIYAKLG 418
            M  +G   D ++ NT                                   VL++  K G
Sbjct: 281 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 340

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           +   A+ + ++ME   I+ DAV Y+ ++ G  K G  D    +F +M+   ++ N++TY+
Sbjct: 341 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 400

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            LI  +   G + +  ++ R+  +  +  +VV +S LID+  K G +  A  L  EM   
Sbjct: 401 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 460

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD-DKDVQ----- 592
           GI P+ +TY S+ID F +           E  L K  +  +L  M S+  D +++     
Sbjct: 461 GIAPDTITYTSLIDGFCK-----------ENHLDKANQMVDL--MVSKGCDPNIRTFNIL 507

Query: 593 -----EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLK 640
                +A R D+  +++F ++                +  C LG       +FQ+M   K
Sbjct: 508 INGYCKANRIDDG-LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 566

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRL----FDNQVYG-VAHGLLMGYR-DNIW 694
           + PN+VT+  +L+        E A  + E++       D  +Y  + HG+    + D+ W
Sbjct: 567 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 626

Query: 695 VQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLV 735
                LF  + L         YN +   L   G    A+L+
Sbjct: 627 ----DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 663



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 153/329 (46%), Gaps = 7/329 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+    N G W    +     +KR  + N      S +I    + GK+  A+ + + 
Sbjct: 399 YNILIGGFCNAGRWDDGAKLLRDMIKR--KINPNVVTFSVLIDSFVKEGKLREAEELHKE 456

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            ++ G       +++LI  + +  +  +A  + + M      PN+ T+N +I+  C    
Sbjct: 457 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 516

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           +D    +E+F  M   GV  D +T+N+L+   C  G L   A+ LF EMV R +  +I T
Sbjct: 517 ID--DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL-NVAKELFQEMVSRKVPPNIVT 573

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y  LLD +C   + + A EI  ++    +  ++  Y+ +I G   A ++DDA ++F  + 
Sbjct: 574 YKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 633

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+     +YN ++    K G   EA L+ ++ME  G   D  TYN L+  +   G   
Sbjct: 634 LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDAT 693

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           +  ++ E++K    S +  T   +ID+ S
Sbjct: 694 KSVKLIEELKRCGFSVDASTIKMVIDMLS 722


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 212/415 (51%), Gaps = 3/415 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +T L+R L   G+  +A+  F   V    + N  G     +I  L ++G    A  +  +
Sbjct: 147 FTTLIRGLCVEGKIGEALHLFDKMVGEGFQPN--GVTYGTLIHGLCKVGNSRAAIRLLRS 204

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            + +     V  ++ +I    +     EA+++F+ M    + PN+ TYN++I    K   
Sbjct: 205 MVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFS- 263

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           ++KHV  + ++M+ + + P+ + F +L+    + G+   A ++ + M+ RG++ D+ TY 
Sbjct: 264 EWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYT 323

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+D  C  ++MD A ++   M  K  +PNV++YST+I+GY K  R+D A+ +F EM   
Sbjct: 324 ALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQR 383

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            +  + V+YNT++     +GR  +A+ +  EM +SG   D VTY  LL    K    D+ 
Sbjct: 384 ELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQA 443

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             M + ++   ++P++ +Y+ +ID   + G  + A  +F      GL  DV  Y+ +I+ 
Sbjct: 444 MAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMING 503

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           LC  GL+  A  L  EM  +G  P+  TYN I   F R+  T   +  ++  LG+
Sbjct: 504 LCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGR 558



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 197/396 (49%), Gaps = 7/396 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   G    AI+     V++    N      + +I  L +  +V+ A NIF  
Sbjct: 182 YGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPN--VITYNTIIDCLFKDRQVNEALNIFSE 239

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            + +G    V  ++++I    +    +   ++ N M    + PN+V +  ++DA C +G 
Sbjct: 240 MIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGM 299

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           V   H  ++ D M++ GV+PD +T+ +L+   C R  + EA + +F+ MV +G   ++ +
Sbjct: 300 VTIAH--DVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADK-VFDTMVRKGCAPNVIS 356

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y+TL++  CK  ++D A  +  EM  + + PN+VTY+T+I G    GRL DA+ +F EM 
Sbjct: 357 YSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMV 416

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G   D V+Y  +L    K    ++A+ + K +E S +  D  +YN ++ G  + G+ +
Sbjct: 417 ASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELE 476

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
               +F  + +  + P++ TY+ +I+     GL  EA ++FRE    G   D   Y+ + 
Sbjct: 477 AAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLIT 536

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
               +N    SA+ LL EM   G   +  T   I++
Sbjct: 537 RGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVE 572



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 183/369 (49%), Gaps = 1/369 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+    L +VD   ++       G+      F+ LI      G   EA+ +F+ M  
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVG 172

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +PN VTY  +I    K G + +  + +   M++   +P+ IT+N+++    +     
Sbjct: 173 EGFQPNGVTYGTLIHGLCKVG-NSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVN 231

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A N+F+EM+ +GI  ++ TYN+++  +CK ++      +M EM    I PNVV ++T++
Sbjct: 232 EALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLV 291

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D   K G +  A ++   M   G+  D V+Y  ++  +      +EA  V   M   G  
Sbjct: 292 DALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCA 351

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + ++Y+ L+ GY K  + D+   +FE+M    + PN++TY+TLI      G  ++A+ +
Sbjct: 352 PNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIAL 411

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F E   +G   D+V Y  L+D LCK   ++ A+++L  +    + P++ +YN +ID   R
Sbjct: 412 FHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCR 471

Query: 557 SATTECTVD 565
               E   D
Sbjct: 472 VGELEAAGD 480



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 137/509 (26%), Positives = 233/509 (45%), Gaps = 46/509 (9%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G  + VY  + +I+++          SV   + +   +P+  T+  +I   C +G +   
Sbjct: 104 GIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKI--G 161

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             + +FD M+  G QP+ +T+ +L+    + G   AA  L   MV +  + ++ TYNT++
Sbjct: 162 EALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTII 221

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           D + K  Q++ A  I +EM AK ISPNV TY+++I G  K         + +EM    I 
Sbjct: 222 DCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIM 281

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + V + T++    K G    A  V   M   G+  D VTY AL+ G+  + + DE  ++
Sbjct: 282 PNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKV 341

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F+ M     +PN+++YSTLI+ Y K     +AM +F E  Q  L  ++V Y+ LI  LC 
Sbjct: 342 FDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCH 401

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
            G +  A++L  EM   G  P++VTY  ++D   ++        D    + K  E +NL 
Sbjct: 402 VGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHL-----DQAMAMLKAIEGSNL- 455

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
                   D+Q      + + +V G+L  E AG                 +F  +    +
Sbjct: 456 ------APDIQSYNIVIDGMCRV-GEL--EAAGD----------------LFSSLSSKGL 490

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELRL----FDNQVYG-VAHGLLMGYRDNIWVQ 696
            P+V T++ ++N         +A+ L  E+       D+  Y  +  G L   R+N  + 
Sbjct: 491 HPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFL---RNNETLS 547

Query: 697 ALSLFDEVK----LMDSSTASAFYNALTD 721
           A+ L  E+       D+ST +     L+D
Sbjct: 548 AIQLLQEMLGRGFSADASTITLIVEMLSD 576



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 153/311 (49%), Gaps = 3/311 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V  F+ L+ A  + G    A  V + M +  ++P++VTY A++D  C +  +D     ++
Sbjct: 284 VVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMD--EADKV 341

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           FD M+R G  P+ I++++L+    +    + A  LF EM  R +  +I TYNTL+  +C 
Sbjct: 342 FDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCH 401

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A  +  EM A    P++VTY  ++D   K   LD A+ M   ++   +  D  S
Sbjct: 402 VGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQS 461

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN V+    ++G  E A  +   + S G+  D  TY  ++ G   QG   E  ++F +M 
Sbjct: 462 YNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMN 521

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            D  SP+  TY+ +   + +      A+Q+ +E    G  AD    + +++ L  +GL +
Sbjct: 522 TDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQ 581

Query: 527 SAVSLLDEMTK 537
           S   +L E  +
Sbjct: 582 SVKQILHEFVQ 592



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/466 (22%), Positives = 209/466 (44%), Gaps = 33/466 (7%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F+ ML     P  + F  +L   +    +    +L  +M   GI  D++T   ++++ C 
Sbjct: 62  FNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCH 121

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++D  F ++A++      P+  T++T+I G    G++ +AL++F +M   G   + V+
Sbjct: 122 LNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVT 181

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T++    K+G    A+ + + M       + +TYN ++    K  + +E   +F +M 
Sbjct: 182 YGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMI 241

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           A  +SPN+ TY+++I    K   +K    +  E   + +  +VV+++ L+DALCK G+V 
Sbjct: 242 AKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVT 301

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A  ++D M + G+ P+VVTY +++D  G    +E    D   D   +K  A        
Sbjct: 302 IAHDVVDVMIQRGVEPDVVTYTALMD--GHCLRSEMDEADKVFDTMVRKGCA-------- 351

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
              +V       N   K+                   Q I   + +F++M + ++ PN+V
Sbjct: 352 --PNVISYSTLINGYCKI-------------------QRIDKAMYLFEEMCQRELVPNIV 390

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEV 704
           T++ +++         DA  L  E+         V + +L+ Y  +     QA+++   +
Sbjct: 391 TYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAI 450

Query: 705 KLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
           +  + +     YN + D +   G+   A  +      + +  +VW+
Sbjct: 451 EGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWT 496


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 200/396 (50%), Gaps = 2/396 (0%)

Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETAL 220
            L+  L    +  +A   F  A +   R        +A+++ L    +VDLA+  F +AL
Sbjct: 124 MLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSAL 183

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGV- 278
                  +Y F+ +IS   R G  ++A  V   +K + L P++ TYN++ID  C KGG  
Sbjct: 184 RRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAG 243

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           +  HV  +  +M+  G+ P  +TF  L+    +     AA  +F EM  +GI   + TYN
Sbjct: 244 NMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYN 303

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L+  +C   +++   ++M EM    +SPN +T+  ++ G+ K G + DA +    M   
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            +  D V YN ++ +Y +LG+ E+A+ V + M   GI  +  TYN L+ G+ + G +   
Sbjct: 364 NVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + ++MK   +  +++TY+ LI      G  ++A+++  E  + GL+ + + Y+ +I  
Sbjct: 424 SGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQG 483

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            C  G ++SA  +   M K   R NVVTYN  I  F
Sbjct: 484 FCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 155/325 (47%), Gaps = 34/325 (10%)

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P+  + + ++ G   A R+D A   F       +  D  ++NTV+S   ++G+  +A  V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDE---VRRMFEQMKADCVSPNLLTYSTLIDV 483
            K++++ G+     TYN+L+ GY K+G       V  + ++M    +SP  +T+  LI+ 
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y K      A+++F E KQ G+ A VV Y++LI  LC  G VE  V L++EM   G+ PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
            +T+  ++  F +                     AN D +    +++V+      N +I 
Sbjct: 334 EITFGCVLKGFCKKGMMA---------------DAN-DWIDGMTERNVEPDVVIYNILID 377

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           V+ +L       GK E+         + V + M K  I PNV T++ ++   SR   +  
Sbjct: 378 VYRRL-------GKMED--------AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422

Query: 664 ASMLLEELRLFDNQVYGVAHGLLMG 688
           AS LL+E++    +   V + +L+G
Sbjct: 423 ASGLLDEMKEKGIEADVVTYNVLIG 447



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/334 (21%), Positives = 126/334 (37%), Gaps = 67/334 (20%)

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R    + NALL G     + D   + F       VSP++ T++T+I    + G  ++A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVS---LLDEMTKEGIRPNVVTYNSIID 552
           + ++ K  GL   V  Y++LID  CK G   +      LL EM + GI P  VT+  +I+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
            + +++ T   V   E ++ +Q  +A+                      +  +  L++  
Sbjct: 273 GYCKNSNTAAAVRVFE-EMKQQGIAAS----------------------VVTYNSLISGL 309

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             +GK E   +        + ++M  L + PN +TF  +L    +     DA        
Sbjct: 310 CSEGKVEEGVK--------LMEEMEDLGLSPNEITFGCVLKGFCKKGMMADA-------- 353

Query: 673 LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
                              N W+      D +   +       YN L D+    G+   A
Sbjct: 354 -------------------NDWI------DGMTERNVEPDVVIYNILIDVYRRLGKMEDA 388

Query: 733 QLVVLEGKRRQVWENVWSESCLDLHLMSSGAARA 766
             V     ++ +  NV + +CL      SG  R+
Sbjct: 389 MAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422


>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 711

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 191/362 (52%), Gaps = 1/362 (0%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           +L + +I    + G    A  +   A   G         ++ISA   SG   EA ++F  
Sbjct: 272 QLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEE 331

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           +++  +KP    YNA++    K G   K    +  +M + GV PD  T++ L+      G
Sbjct: 332 LRQSGIKPRTKAYNALLKGYVKTG-PLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAG 390

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            WE+AR +  EM    +  + F ++ LL       +    F+++ EM +  + P+   Y+
Sbjct: 391 RWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYN 450

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +ID + K   LD A+  F  M   GI  DRV++NT++  + K GR   A  + + ME  
Sbjct: 451 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 510

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G    A TYN ++  YG Q ++D+++R+  +MK+  + PN++T++TL+DVY K G + +A
Sbjct: 511 GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDA 570

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           ++   E K  GLK    +Y+ALI+A  + GL E AV+    MT +G++P+++  NS+I+A
Sbjct: 571 IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINA 630

Query: 554 FG 555
           FG
Sbjct: 631 FG 632



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 195/410 (47%), Gaps = 40/410 (9%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNT 227
           G+ S+A+Q    A    +      K A+  ++IS L   G+   A+ +FE     G    
Sbjct: 285 GDPSRALQLLGMA----QATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPR 340

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV--------- 278
             A++AL+  Y ++G  ++A  + + M++  + P+  TY+ +IDA    G          
Sbjct: 341 TKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLK 400

Query: 279 -------------------------DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
                                    +++   ++  +M   GV+PDR  +N ++    +  
Sbjct: 401 EMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFN 460

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             + A   F+ M+  GI+ D  T+NTL+D  CK  +  +A E+   M  +   P   TY+
Sbjct: 461 CLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYN 520

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            MI+ Y    R DD   +  +MK  GI  + V++ T++ +Y K GRF +A+   +EM+S 
Sbjct: 521 IMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSV 580

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G++  +  YNAL+  Y ++G  ++    F  M +D + P+LL  ++LI+ + +     EA
Sbjct: 581 GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEA 640

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             + +  K+ G+K DVV Y+ L+ AL +    +    + +EM   G +P+
Sbjct: 641 FAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSGCKPD 690



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 153/291 (52%), Gaps = 1/291 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           + FS L++ Y   G  Q+   V   MK   +KP+   YN VID  GK      H +  FD
Sbjct: 412 FVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNC-LDHAMTTFD 470

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            ML  G++PDR+T+N+L+    + G    A  +F  M  RG      TYN ++++     
Sbjct: 471 RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 530

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           + D    ++ +M ++ I PNVVT++T++D Y K+GR +DA+    EMK +G+      YN
Sbjct: 531 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 590

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +++ YA+ G  E+A+   + M S G++   +  N+L+  +G+  +  E   + + MK +
Sbjct: 591 ALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKEN 650

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            V P+++TY+TL+    +   +++   ++ E   +G K D    S L  AL
Sbjct: 651 GVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSGCKPDRKARSMLRSAL 701



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 225/534 (42%), Gaps = 98/534 (18%)

Query: 197 SAMISILGRLGKVDLAKNIFETA--------LNEGYGNTVYAFSALISAYGRS---GYCQ 245
           S ++  L R G V+L  +    +        LN      V ++SA+ + Y  S     C 
Sbjct: 85  SPLLKFLSRFGPVELVLDSESESESEASPESLNPVEFELVESYSAVPAPYWHSLIKSLCS 144

Query: 246 E------AISVFNSMKRYNLKPNL-VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
                  A +V + ++++NL  +  + Y+ +I A G+     + + E F    +  + P 
Sbjct: 145 STSSLGLAYAVVSWLQKHNLCFSYELLYSILIHALGRS----EKLYEAFLLSQKQTLTP- 199

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD------- 351
            +T+N+L+  C+R    E A NL + M   G   D   Y+ ++ ++ +  ++D       
Sbjct: 200 -LTYNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRL 258

Query: 352 ------------------------------LAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
                                          A +++    A  +S    T  ++I   A 
Sbjct: 259 YKEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALAN 318

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           +GR  +A  +F E++  GI     +YN +L  Y K G  ++A L+  EME  G+  D  T
Sbjct: 319 SGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHT 378

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y+ L+  Y   G+++  R + ++M+   V PN   +S L+  Y   G +++  Q+ +E K
Sbjct: 379 YSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMK 438

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGRSA 558
             G+K D   Y+ +ID   K   ++ A++  D M  EGI P+ VT+N++ID     GR  
Sbjct: 439 SIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI 498

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
             E   + +ER                   +       T N +I  +G    E+    K+
Sbjct: 499 VAEEMFEAMER-------------------RGCLPCATTYNIMINSYGD--QERWDDMKR 537

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                     +LG   KM    I PNVVT + +++   +   F DA   LEE++
Sbjct: 538 ----------LLG---KMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 578



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 151/333 (45%), Gaps = 44/333 (13%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +LK+ E      + + F  LL    +RGEW K  Q     +K    K D+ +  + +I  
Sbjct: 398 VLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLK-EMKSIGVKPDR-QFYNVVIDT 455

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
            G+   +D A   F+  L+EG                                   ++P+
Sbjct: 456 FGKFNCLDHAMTTFDRMLSEG-----------------------------------IEPD 480

Query: 263 LVTYNAVIDACGKGGVDFKHVV--EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
            VT+N +ID   K G   +H+V  E+F+ M R G  P   T+N ++        W+  + 
Sbjct: 481 RVTWNTLIDCHCKHG---RHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKR 537

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L  +M  +GI  ++ T+ TL+D   K  + + A E + EM +  + P+   Y+ +I+ YA
Sbjct: 538 LLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYA 597

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           + G  + A+N F  M   G+    ++ N++++ + +  R  EA  V + M+ +G++ D V
Sbjct: 598 QRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVV 657

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           TY  L+    +  K+ +V  ++E+M      P+
Sbjct: 658 TYTTLMKALIRVDKFQKVPGVYEEMIMSGCKPD 690



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 65/309 (21%), Positives = 112/309 (36%), Gaps = 65/309 (21%)

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
           C S  LL YS LI    +     EA  + ++     L      Y+ALI A  +N  +E A
Sbjct: 165 CFSYELL-YSILIHALGRSEKLYEAFLLSQKQTLTPLT-----YNALIGACARNNDIEKA 218

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGR-----SATTECTVDDVERDLGKQKESANLDAM 583
           ++L+  M ++G + + V Y+ +I +  R     S   +    ++ERD         LD  
Sbjct: 219 LNLISRMRQDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIERD------KLELDVQ 272

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL---------GVFQ 634
              D           ++ +++ G  +A+  G   K       I  +           +F+
Sbjct: 273 LVNDIIMGFAKSGDPSRALQLLG--MAQATGLSAKTATLVSIISALANSGRTLEAEALFE 330

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR-------------LFDNQVYG- 680
           ++ +  IKP    ++A+L    +    +DA +++ E+              L D  V   
Sbjct: 331 ELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAG 390

Query: 681 ----------------------VAHGLLMGYRDN-IWVQALSLFDEVKLMDSSTASAFYN 717
                                 V   LL GYRD   W +   +  E+K +       FYN
Sbjct: 391 RWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYN 450

Query: 718 ALTDMLWHF 726
            + D    F
Sbjct: 451 VVIDTFGKF 459


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 155/575 (26%), Positives = 267/575 (46%), Gaps = 28/575 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI +L + G++  A+ +F     E      YA++ +I  YG +G  + A  + + +K 
Sbjct: 291 TSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKE 350

Query: 257 YNLKPNLVTYNAVIDACGKG-GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               P++V++N+++   GK   VD    + +F+ M ++  +P+  T+N ++ +    G  
Sbjct: 351 RGCIPSVVSFNSILTCLGKKRKVD--EALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKV 407

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  + +EM H G+  ++ T N ++D +CK  + + A+E+      +  +PN VTY ++
Sbjct: 408 EEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSL 467

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K G +DDA  +F  M   G   + V Y +++  +   GR E+   + KEM   G 
Sbjct: 468 IDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGC 527

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D    N  +    K G  ++ R +FE +K     P++ +YS LI   +K G  +E   
Sbjct: 528 QPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSS 587

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           IF   KQ G   D   Y+A++D  CK+G ++ A  +L+EM  + + P V TY SIID   
Sbjct: 588 IFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLA 647

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
           +    +      E    K  E  N+    S  D    + GR D   +     ++ E   +
Sbjct: 648 KIDRLDEAYMLFEEAKSKGIE-LNVIVYSSLID-GFGKVGRIDEAYL-----ILEEMMKK 700

Query: 616 GKKENRCR-----------QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           G   N              +EI   L  FQ M ++K  PN  T+S ++N   R   +  A
Sbjct: 701 GLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKA 760

Query: 665 SMLLEELR---LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
            +  +E++   L  N V        +    NI   A SLF+  K    +  +A +NAL +
Sbjct: 761 FVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNI-TDACSLFERFKANGGTPDAASFNALIE 819

Query: 722 MLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDL 756
            + H  +   A  V  E + +    NV  ++C+ L
Sbjct: 820 GMSHANRAIEAYHVFEETRLKGCRINV--KACISL 852



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 244/531 (45%), Gaps = 41/531 (7%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           GYG    A + L+SA  R+    +A  V  +M+R   +P    Y  +I A  +     + 
Sbjct: 142 GYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQP-ER 200

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            +E+   M   G +     F +L+   +R G  E A  L +E+    ++ DI  YN  +D
Sbjct: 201 ALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCID 260

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
              K   +D+A++   E+ ++ + P+ V+Y++MI    KAGRL +A  +F +M+      
Sbjct: 261 CFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVP 320

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
              +YNT++  Y   G+FE A  +  +++  G     V++N++L   GK+ K DE   +F
Sbjct: 321 CAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF 380

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           E MK D   PN  TY+ +ID+    G  +EA  I  E + AGL  +++  + ++D LCK 
Sbjct: 381 EAMKKD-AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKA 439

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
              E A  + +  ++ G  PN VTY S+ID  G+       VDD  R             
Sbjct: 440 KKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKG----NVDDAYRLF----------- 484

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
                 +++ + G   N +  V+  L+      G+KE+  +        +F++M++   +
Sbjct: 485 ------ENMLDTGHNANPV--VYTSLIRNFFMHGRKEDGHK--------IFKEMNRRGCQ 528

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGV-AHGLLMGYRDNIWVQA 697
           P++   +  ++   +    E    + E+++    L D + Y +  HGL    +     + 
Sbjct: 529 PDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQAR---ET 585

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENV 748
            S+F  +K    +  +  YNA+ D     G+   A  V+ E K ++V   V
Sbjct: 586 SSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTV 636



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 220/471 (46%), Gaps = 40/471 (8%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           GY   V  F+ L+ A  R G  + A+++ + +K   L+P++V YN  ID  GK G +   
Sbjct: 212 GYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAG-NVDM 270

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             + F ++   G++PD +++ S++ V  + G    A  LF +M         + YNT++ 
Sbjct: 271 AWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIM 330

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
                 Q + A++++ ++  +   P+VV++++++    K  ++D+AL +F  MK      
Sbjct: 331 GYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEP 389

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           +  +YN ++ +    G+ EEA ++  EME +G+  + +T N ++    K  K++    MF
Sbjct: 390 NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMF 449

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           E       +PN +TY +LID   K G   +A ++F      G  A+ V+Y++LI     +
Sbjct: 450 ETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMH 509

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE---CTVDDVE----------- 568
           G  E    +  EM + G +P++   N+ +D   ++   E      +D++           
Sbjct: 510 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 569

Query: 569 -------RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
                     G+ +E++++     Q    +    R  N ++  F      K+G+  K   
Sbjct: 570 SILIHGLTKAGQARETSSIFHAMKQQGFALD--ARAYNAVVDGFC-----KSGKLDKAYE 622

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                     V ++M   ++ P V T+ +I++  ++ +  ++A ML EE +
Sbjct: 623 ----------VLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAK 663



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 189/373 (50%), Gaps = 9/373 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKVDLAKNIF 216
           YT L+R     G      + F    K   R+  Q  L   +  +  + + G V+  + IF
Sbjct: 499 YTSLIRNFFMHGRKEDGHKIF----KEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIF 554

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
           E     G+   V ++S LI    ++G  +E  S+F++MK+     +   YNAV+D  C  
Sbjct: 555 EDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKS 614

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G +D  +  E+ ++M    V P   T+ S++   ++    + A  LF E   +GI+ ++ 
Sbjct: 615 GKLDKAY--EVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVI 672

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            Y++L+D   K  ++D A+ I+ EM  K ++PNV T+++++D   KA  +++AL  F  M
Sbjct: 673 VYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSM 732

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           K +    +  +Y+ +++   ++ ++ +A +  +EM+  G+  + VTY  ++ G  K G  
Sbjct: 733 KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNI 792

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            +   +FE+ KA+  +P+  +++ LI+  S      EA  +F E +  G + +V    +L
Sbjct: 793 TDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISL 852

Query: 516 IDALCKNGLVESA 528
           +DAL K   +E A
Sbjct: 853 LDALNKAECLEQA 865



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 130/570 (22%), Positives = 253/570 (44%), Gaps = 32/570 (5%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++S L R  ++D A+ +        +     A++ LI A   +   + A+ +   M+   
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +  +  +  ++ A  + G   +  + + D++  + ++PD + +N  +    + G  + A
Sbjct: 213 YEVGVPLFTTLVRALAREG-RVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMA 271

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
              F+E+  +G+  D  +Y +++  +CK  ++  A E+  +M  +   P    Y+TMI G
Sbjct: 272 WKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMG 331

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y  AG+ ++A  +  ++K  G     VS+N++L+   K  + +EAL + + M+      +
Sbjct: 332 YGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPN 390

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           + TYN ++      GK +E   + ++M+   + PNLLT + ++D   K   ++ A ++F 
Sbjct: 391 SSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFE 450

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---G 555
              Q G   + V Y +LID L K G V+ A  L + M   G   N V Y S+I  F   G
Sbjct: 451 TASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHG 510

Query: 556 RSATTECTVDDVERDLGKQKESANLDAM--CSQDDKDVQEAGRTDNQIIKVFGQLV---- 609
           R         ++ R  G Q +   L+    C     DV E GR   + IK +G L     
Sbjct: 511 RKEDGHKIFKEMNRR-GCQPDLTLLNTYMDCVFKAGDV-EKGRAIFEDIKGYGFLPDVRS 568

Query: 610 -------AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
                    KAGQ ++ +           +F  M +     +   ++A+++   +    +
Sbjct: 569 YSILIHGLTKAGQARETS----------SIFHAMKQQGFALDARAYNAVVDGFCKSGKLD 618

Query: 663 DASMLLEELRLFDNQVYGVAHGLLMGYRDNI--WVQALSLFDEVKLMDSSTASAFYNALT 720
            A  +LEE+++         +G ++     I    +A  LF+E K          Y++L 
Sbjct: 619 KAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLI 678

Query: 721 DMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
           D     G+   A L++ E  ++ +  NV++
Sbjct: 679 DGFGKVGRIDEAYLILEEMMKKGLTPNVYT 708



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 128/307 (41%), Gaps = 36/307 (11%)

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +  EM  LG G+   +   ++S   +  R ++A  V   M     R     Y  L+G   
Sbjct: 134 VLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMA 193

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           +  + +    +  QM+       +  ++TL+   ++ G  + A+ +  E K + L+ D+V
Sbjct: 194 EARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIV 253

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
           LY+  ID   K G V+ A     E+  +G++P+ V+Y S+I    ++      + + E  
Sbjct: 254 LYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAG----RLSEAEEL 309

Query: 571 LGKQKESANLDAMCSQDDKDV--QEAGRTDNQIIKVFGQLVAEKAGQGKKENRC------ 622
            G+ +    +    + +   +    AG+ +N   K+  QL         KE  C      
Sbjct: 310 FGQMETERAVPCAYAYNTMIMGYGSAGQFENA-YKLLDQL---------KERGCIPSVVS 359

Query: 623 RQEILCILG----------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              IL  LG          +F+ M K   +PN  T++ I++        E+A M+ +E+ 
Sbjct: 360 FNSILTCLGKKRKVDEALTLFEAMKK-DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEME 418

Query: 673 ---LFDN 676
              LF N
Sbjct: 419 HAGLFPN 425


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 193/361 (53%), Gaps = 3/361 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+   ++G+V+ A    +  + +G+      ++  +    ++G+   A+ V + M +
Sbjct: 269 NVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQ 328

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
               P++ TYN VI+   K G +      I + M+  G  PD  TFN+L+ A+CS+  L 
Sbjct: 329 EGHDPDVFTYNTVINCLSKNG-ELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLE 387

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA  +L  E+  +G+  D++T+N L++A+CK     L   +  EM +   +P+ VTY+ +
Sbjct: 388 EAL-DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNIL 446

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID     G+L +AL++  EM+  G     V+YNT++    K  R EEA  V  +M++ GI
Sbjct: 447 IDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGI 506

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
            + AVT+N L+ G  K  + D+   + EQM  + + P+ +TY++++  Y K G  K+A  
Sbjct: 507 SRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAAD 566

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I       G + DVV Y  LI+ LCK G  + A+ LL  M  +GIRP    YN +I +  
Sbjct: 567 ILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLF 626

Query: 556 R 556
           R
Sbjct: 627 R 627



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 189/356 (53%), Gaps = 3/356 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++ A  +    +  G   T    + LI+ Y + G  ++A+           +P+ VTY
Sbjct: 244 GSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTY 303

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N  +   C  G V   H +++ D ML+ G  PD  T+N+++   S+ G  + A+ + N+M
Sbjct: 304 NTFVHCLCQNGHV--SHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 361

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V RG   D  T+NTL+ A+C   +++ A ++  E+  K +SP+V T++ +I+   K G  
Sbjct: 362 VDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDP 421

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
              + +F EMK  G   D V+YN ++     +G+   AL + KEMES+G  +  VTYN +
Sbjct: 422 HLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTI 481

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +    KQ + +E   +F+QM A  +S + +T++TLID   K     +A ++  +  + GL
Sbjct: 482 IDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGL 541

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +   + Y++++   CK G ++ A  +L+ MT  G   +VVTY ++I+   ++  T+
Sbjct: 542 QPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQ 597



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 185/360 (51%), Gaps = 4/360 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L + G++D AK I    ++ G       F+ LI A       +EA+ +   +  
Sbjct: 339 NTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTV 398

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLW 315
             L P++ T+N +I+A  K G D    + +F++M  +G  PD +T+N L+  +CS G L 
Sbjct: 399 KGLSPDVYTFNILINALCKVG-DPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLV 457

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            A  +L  EM   G  +   TYNT++DA+CK  +++ A E+  +M A  IS + VT++T+
Sbjct: 458 NAL-DLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTL 516

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  KA R+DDA  +  +M   G+    ++YN++L+ Y K G  ++A  + + M ++G 
Sbjct: 517 IDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGF 576

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VTY  L+ G  K G+     ++   M+   + P    Y+ +I    +    ++A+ 
Sbjct: 577 EIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALS 636

Query: 496 IFREFKQAGLKADVVLYSALIDALCK-NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +FRE  + G   D + Y  +   LC+  G ++ A   L EM  +G  P   ++  + +  
Sbjct: 637 LFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 696



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 147/592 (24%), Positives = 255/592 (43%), Gaps = 47/592 (7%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           D   LL  L  + +   A+Q    A+ RE+    +  +   +I  LG  G  DL + +  
Sbjct: 55  DQDRLLTALREQADPEAALQMLNSALAREDFAPSRA-VYEEIIQKLGTAGAFDLMEGLVR 113

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKRYNLKPNLVTYNAVIDACGKG 276
               EG+        + + +Y R     +A+  V N +  + ++ +   YN +++   +G
Sbjct: 114 EMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEG 173

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
               K +  ++++M   G+QPD +T N+L+    R      A  +  EM    +  D  T
Sbjct: 174 S-RMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETT 232

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           + TL+    +   ++ A  +  +M     SP  VT + +I+GY K GR++DAL    +  
Sbjct: 233 FTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEI 292

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G   D+V+YNT +    + G    AL V   M   G   D  TYN ++    K G+ D
Sbjct: 293 ADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELD 352

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E + +  QM      P+  T++TLI         +EA+ + RE    GL  DV  ++ LI
Sbjct: 353 EAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILI 412

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
           +ALCK G     + L +EM   G  P+ VTYN +ID         C+       +GK   
Sbjct: 413 NALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHL-------CS-------MGKLVN 458

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVF-GQLVAEKAGQGKKENRCRQEILCILGVFQK 635
           +  LD +   +      +  T N II     Q+  E+A +                VF +
Sbjct: 459 A--LDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEE----------------VFDQ 500

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWV 695
           M    I  + VTF+ +++   +    +DA+ L+E++     Q   + +  ++ +    + 
Sbjct: 501 MDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTH----YC 556

Query: 696 QALSLFDEVKLMDSSTASAF------YNALTDMLWHFGQKRGAQLVVLEGKR 741
           +   L     ++++ TA+ F      Y  L + L   G+ + A L +L G R
Sbjct: 557 KQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVA-LKLLRGMR 607



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 223/476 (46%), Gaps = 34/476 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L R  +V  A  + E   +         F+ L+  +   G  + A+ V   M  
Sbjct: 199 NTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMME 258

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               P  VT N +I+  C  G V+    +      + +G +PD++T+N+ +    + G  
Sbjct: 259 TGCSPTRVTVNVLINGYCKMGRVE--DALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHV 316

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  + + M+  G D D+FTYNT+++ + K  ++D A  I+ +M  +   P+  T++T+
Sbjct: 317 SHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTL 376

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I       RL++AL++  E+   G+  D  ++N +++   K+G     + + +EM+SSG 
Sbjct: 377 IVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGC 436

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VTYN L+      GK      + ++M+++    + +TY+T+ID   K    +EA +
Sbjct: 437 APDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEE 496

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F +    G+    V ++ LID LCK   ++ A  L+++M KEG++P+ +TYNSI+  + 
Sbjct: 497 VFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYC 556

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
           +               G  K++A++    + +  ++          +  +G L+      
Sbjct: 557 KQ--------------GDLKKAADILETMTANGFEID---------VVTYGTLINGLCKA 593

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           G+ +          L + + M    I+P    ++ ++ +  R N+  DA  L  E+
Sbjct: 594 GRTQ--------VALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREM 641


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 186/352 (52%), Gaps = 3/352 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R GK++ A  +F+  L+    + V +F+ L++   R+G  + A+  F  M      PN
Sbjct: 55  LFRTGKLERAMALFQEMLDR-RSHDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPN 112

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           ++TY+ +ID   K        VE+ + M   G  PD IT+  L+    +     AA  + 
Sbjct: 113 VITYSVLIDGLCKAN-RVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVL 171

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            EM+  G   ++ TYN+LL  +C+  ++  A  +M +M  +  +PNVVTY T+IDG  K 
Sbjct: 172 REMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKV 231

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           GR+ DA  M ++M   G   D + YN +++   K  + +E++ + +   S GI+ D VTY
Sbjct: 232 GRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTY 291

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           ++++ G  +  + DE  R+   +K+    P+++ YSTLID   K G   EA  ++     
Sbjct: 292 SSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTG 351

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            G  ADVV YS LID LCK G V+ A  LL  M + G  P+ +TYNS+I   
Sbjct: 352 DGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 199/399 (49%), Gaps = 7/399 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL  L   G+  +A+  F   + R  R +D     + +++ L R GK++ A   F  
Sbjct: 48  YNTLLDGLFRTGKLERAMALFQEMLDR--RSHDVISF-NILVTGLCRAGKIETALEFFR- 103

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +++     V  +S LI    ++    +A+ +  SMK     P+++TY  ++D  C +  
Sbjct: 104 KMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESK 163

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           V      E+  +ML  G  P+ +T+NSLL    R      A  L  +M  RG   ++ TY
Sbjct: 164 V--AAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTY 221

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TL+D +CK  ++  A  ++A+M  K  +P+++ Y+ +I+G  KA ++D+++ +      
Sbjct: 222 GTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS 281

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI  D V+Y++V+    +  R +EA  +   ++S G   D + Y+ L+ G  K GK DE
Sbjct: 282 GGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDE 341

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              ++E M  D    +++TYSTLID   K G   EA  +     + G     + Y++LI 
Sbjct: 342 AFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIK 401

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            LC    ++ A+ L++EM +    P+ VTYN +I    R
Sbjct: 402 GLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCR 440



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 223/471 (47%), Gaps = 36/471 (7%)

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           M+ +  +PN+VTYN++ID   K   +     E+F+ M      P  +T+N+LL    R G
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNN-EPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTG 59

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             E A  LF EM+ R    D+ ++N L+  +C+  +++ A E   +M  +  SPNV+TYS
Sbjct: 60  KLERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYS 117

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +IDG  KA R+  A+ +   MK  G   D ++Y  ++    K  +   A  V +EM  +
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G   + VTYN+LL G  +  +  +   +   M     +PN++TY TLID   K G  K+A
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             +  +    G   D+++Y+ LI+ LCK   V+ +++LL      GI+P+VVTY+S+I  
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 297

Query: 554 FGRSATTECTVDDVERDLGKQKE----------SANLDAMCSQDDKDVQEAGRTDNQIIK 603
             RS      +D+  R L   K           S  +D +C        +AG+ D +   
Sbjct: 298 LCRSN----RLDEACRLLLYVKSRGCPPDVILYSTLIDGLC--------KAGKVD-EAFD 344

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACS 656
           ++  +  +             + LC  G       +  +M ++   P+ +T+++++    
Sbjct: 345 LYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 404

Query: 657 RCNSFEDASMLLEELRLFDNQVYGVAHGLL---MGYRDNIWVQALSLFDEV 704
             N  ++A  L+EE+   +     V + +L   M   + +   AL  F E+
Sbjct: 405 DLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEM 455



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 190/367 (51%), Gaps = 7/367 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-- 254
           +++I  L +  + D A+ +FE   +     ++  ++ L+    R+G  + A+++F  M  
Sbjct: 14  NSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLD 73

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           +R +   +++++N ++    + G   +  +E F  M  +   P+ IT++ L+    +   
Sbjct: 74  RRSH---DVISFNILVTGLCRAG-KIETALEFFRKM-DDRCSPNVITYSVLIDGLCKANR 128

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A  L   M  RG   D+ TY  L+D +CK +++  A+E++ EM      PN+VTY++
Sbjct: 129 VSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNS 188

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++ G  +A R+ DAL +  +M   G   + V+Y T++    K+GR ++A  +  +M   G
Sbjct: 189 LLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKG 248

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D + YN L+ G  K  + DE   +  +  +  + P+++TYS++I    +     EA 
Sbjct: 249 GTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEAC 308

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++    K  G   DV+LYS LID LCK G V+ A  L + MT +G   +VVTY+++ID  
Sbjct: 309 RLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGL 368

Query: 555 GRSATTE 561
            ++   +
Sbjct: 369 CKAGRVD 375



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 144/287 (50%), Gaps = 6/287 (2%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R  +V  A  +       G    V  +  LI    + G  ++A ++   M      P+
Sbjct: 193 LCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPD 252

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARN 320
           L+ YN +I+  C    VD    + +    +  G++PD +T++S++  +C    L EA R 
Sbjct: 253 LMIYNMLINGLCKADQVD--ESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRL 310

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L   +  RG   D+  Y+TL+D +CK  ++D AF++   M       +VVTYST+IDG  
Sbjct: 311 LLY-VKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLC 369

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           KAGR+D+A  + + M  +G     ++YN+++     L   +EA+ + +EME S     AV
Sbjct: 370 KAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAV 429

Query: 441 TYNALLGGYGKQGKYDEVR-RMFEQMKADCVSPNLLTYSTLIDVYSK 486
           TYN L+ G  +  + D      F++M  + V P+ +TYS L++   K
Sbjct: 430 TYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKK 476



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 138/271 (50%), Gaps = 5/271 (1%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            +I  L ++G+V  A  +    +++G    +  ++ LI+   ++    E+I++       
Sbjct: 223 TLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG 282

Query: 258 NLKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            +KP++VTY++VI   C    +D    + ++  +   G  PD I +++L+    + G  +
Sbjct: 283 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLY--VKSRGCPPDVILYSTLIDGLCKAGKVD 340

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +L+  M   G D D+ TY+TL+D +CK  ++D A  ++A M      P+ +TY+++I
Sbjct: 341 EAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLI 400

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL-VCKEMESSGI 435
            G      LD+A+ +  EM+        V+YN ++    ++ R + A L   +EM  +G+
Sbjct: 401 KGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGV 460

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRM-FEQM 465
             D +TY+ LL G  K     E+R +  +QM
Sbjct: 461 IPDHITYSILLEGLKKSKDLHELRHLVLDQM 491



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 8/160 (5%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L S +I  L + GKVD A +++E    +G    V  +S LI    ++G   EA  +   M
Sbjct: 325 LYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARM 384

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLL-AVCS 310
            R    P+ +TYN++I    KG  D  H+   +E+ ++M R+   P  +T+N L+  +C 
Sbjct: 385 VRMGTPPSTMTYNSLI----KGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCR 440

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
              +  AA + F EM+  G+  D  TY+ LL+ + K   +
Sbjct: 441 MERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDL 480


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 211/431 (48%), Gaps = 50/431 (11%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + SA+I  L + G+   + N+F    ++G    +  ++ +I  +  SG    A  +   M
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               + PN+VTYNA+I+A  K G  F    E++D+ML  G+ P+ IT+NS++    +   
Sbjct: 315 LERKISPNVVTYNALINAFVKEG-KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +AA ++F  M  +G   D+FT+ TL+D  C   ++D   E++ EMP + +  N VTY+T
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 375 MI-----------------------------------DGYAKAGRLDDALNMFSEMK--- 396
           +I                                   DG    G+L DAL MF  M+   
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 397 --------FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
                   F G+  D ++YN ++      G+F EA  + +EM   GI  D +TY++++ G
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             KQ + DE  +MF  M +   SPN++T++TLI+ Y K G   + +++F E  + G+ AD
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV---D 565
            ++Y  LI    K G +  A+ +  EM   G+ P+ +T  +++  F      E  V   +
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 673

Query: 566 DVERDLGKQKE 576
           D++  +G Q E
Sbjct: 674 DLQMSVGYQLE 684



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 240/505 (47%), Gaps = 47/505 (9%)

Query: 191 DQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISV 250
           D  KL  A++    R+ + DL  ++++    +     +Y+F+ LI  +        A+S 
Sbjct: 83  DFNKLMGAVV----RMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138

Query: 251 FNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVC 309
           F  + +  L P++VT+  ++      G+   H V    D+     +PD +TF +L+  +C
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLH-----GLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLC 193

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-PAKNISPN 368
             G + EA   L + MV  G+  D  TY T +D +CK      A  ++ +M    +I PN
Sbjct: 194 REGRVVEAVA-LLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPN 252

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           VV YS +IDG  K GR  D+ N+F EM+  GI  + V+YN ++  +   GR+  A  + +
Sbjct: 253 VVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQ 312

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
           EM    I  + VTYNAL+  + K+GK+ E   ++++M    + PN +TY+++ID + K  
Sbjct: 313 EMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 372

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
               A  +F      G   DV  ++ LID  C    ++  + LL EM + G+  N VTYN
Sbjct: 373 RLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYN 432

Query: 549 SIIDAFGRSATTECTVDDVER--DLGKQKESAN-----------LDAMCSQDDKDVQEAG 595
           ++I  F       C V D+    DL +Q  S+            LD +C  D+  +++A 
Sbjct: 433 TLIHGF-------CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC--DNGKLKDAL 483

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG------------VFQKMHKLKIKP 643
                + K    L A     G + +     IL I G            ++++M    I P
Sbjct: 484 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL-ICGLINEGKFLEAEELYEEMPHRGIVP 542

Query: 644 NVVTFSAILNACSRCNSFEDASMLL 668
           + +T+S++++   + +  ++A+ + 
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMF 567



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 160/321 (49%), Gaps = 11/321 (3%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
            +  +++F DMLR+   P  I FN L+    R    +   +L+ +M  + I  DI+++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+   C  +++  A     ++    + P+VVT++T++ G     R+ +AL++F ++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
              D +++ T+++   + GR  EA+ +   M  +G++ D +TY   + G  K G      
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 460 RMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            +  +M +   + PN++ YS +ID   K G + ++  +F E +  G+  ++V Y+ +I  
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA----TTECTVDDVERDLGKQ 574
            C +G   +A  LL EM +  I PNVVTYN++I+AF +        E   + + R +   
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 575 KESAN--LDAMCSQDDKDVQE 593
             + N  +D  C QD  D  E
Sbjct: 358 TITYNSMIDGFCKQDRLDAAE 378



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 175/363 (48%), Gaps = 13/363 (3%)

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A +LF++M+       +  +N L+ A+ +  + DL   +  +M  K I  ++ +++ +
Sbjct: 63  EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 122

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I  +    +L  AL+ F ++  LG+  D V++ T+L       R  EAL +  ++     
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----C 178

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R D +T+  L+ G  ++G+  E   + ++M  + + P+ +TY T +D   K G    A+ 
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 496 IFREFKQAG-LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + R+ ++   +K +VV+YSA+ID LCK+G    + +L  EM  +GI PN+VTYN +I  F
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 555 ---GR-SATTECTVDDVERDLGKQKESAN-LDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
              GR SA      + +ER +     + N L     ++ K  + A   D  + +  G + 
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR--GIIP 356

Query: 610 AEKAGQGKKENRCRQEIL-CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
                    +  C+Q+ L     +F  M      P+V TF+ +++        +D   LL
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 669 EEL 671
            E+
Sbjct: 417 HEM 419



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 134/316 (42%), Gaps = 46/316 (14%)

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            E+A+ +  +M  S      + +N L+G   +  + D V  ++++M+   +  ++ +++ 
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LI  +        A+  F +  + GL  DVV ++ L+  LC +  V  A+ L  ++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC--- 178

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES-ANLDAMCSQDDKDVQEAGRTD 598
            RP+V+T+ ++++   R               G+  E+ A LD M         E G   
Sbjct: 179 -RPDVLTFTTLMNGLCRE--------------GRVVEAVALLDRMV--------ENGLQP 215

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK-IKPNVVTFSAILNACSR 657
           +QI   +G  V      G        + +  L + +KM ++  IKPNVV +SAI++   +
Sbjct: 216 DQI--TYGTFVDGMCKMG--------DTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCK 265

Query: 658 CNSFEDASMLLEELR---LFDNQVY--GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTA 712
                D+  L  E++   +F N V    +  G  +  R   W  A  L  E+     S  
Sbjct: 266 DGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGR---WSAAQRLLQEMLERKISPN 322

Query: 713 SAFYNALTDMLWHFGQ 728
              YNAL +     G+
Sbjct: 323 VVTYNALINAFVKEGK 338


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 198/378 (52%), Gaps = 3/378 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+ L ++G   +A  + +    +G    V A++ +I +  +     EA+  F+ M +
Sbjct: 49  STIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVK 108

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + P++ TY++++   C  G V+      +F  M+   V P+++TF  L+    +  + 
Sbjct: 109 EGIPPDVFTYSSILHGFCNLGRVN--EATSLFKQMVERNVIPNKVTFTILIDGLCKKRMI 166

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  +F  M  +G++ D++TYN L+D  C  +QMD A ++   M  K  +PNV +Y+ +
Sbjct: 167 SEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNIL 226

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+G+ K+GR+D+A  + +EM    +  D  +Y+T++  + ++GR +EA  + KEM S G+
Sbjct: 227 INGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGL 286

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + +TY+ +L G  K G  DE   + + M+   + PN+  Y+ LI+     G  + A +
Sbjct: 287 LPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARE 346

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F      G++  VV Y+ +I  L K GL   A  L  EM   G  PN  TYN II  F 
Sbjct: 347 LFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFL 406

Query: 556 RSATTECTVDDVERDLGK 573
           R+  T   V  +E  +GK
Sbjct: 407 RNGDTPNAVRLIEEMVGK 424



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 203/397 (51%), Gaps = 9/397 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           Y+ ++  L   G  + A+Q      K EE+      +A + +I  L +   V  A + F 
Sbjct: 48  YSTIINGLCKMGNTTMALQLLK---KMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFS 104

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKG 276
             + EG    V+ +S+++  +   G   EA S+F  M   N+ PN VT+  +ID  C K 
Sbjct: 105 EMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKR 164

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            +    +V  F+ M   G++PD  T+N+L+   CSR  + EA + LFN M  +G   ++ 
Sbjct: 165 MISEAWLV--FETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQK-LFNIMDRKGCAPNVR 221

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           +YN L++  CK  ++D A  ++AEM  K+++P++ TYST++ G+ + GR  +A  +  EM
Sbjct: 222 SYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEM 281

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G+  + ++Y+ VL    K G  +EA  + K M+ S I  +   Y  L+ G    GK 
Sbjct: 282 CSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKL 341

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           +  R +F  +    + P ++TY+ +I    KGGL  EA ++FRE    G   +   Y+ +
Sbjct: 342 EAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVI 401

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           I    +NG   +AV L++EM  +G   +  T+  + D
Sbjct: 402 IQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSD 438



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 166/304 (54%), Gaps = 3/304 (0%)

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M +  L+P LVT+N ++   C K  +     V++FD+M++ G +PD IT+++++    + 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKI--MDAVKLFDEMVKMGHEPDVITYSTIINGLCKM 58

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G    A  L  +M  +G   ++  YNT++D++CK   +  A +  +EM  + I P+V TY
Sbjct: 59  GNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTY 118

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           S+++ G+   GR+++A ++F +M    +  ++V++  ++    K     EA LV + M  
Sbjct: 119 SSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTE 178

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G+  D  TYNAL+ GY  + + DE +++F  M     +PN+ +Y+ LI+ + K G   E
Sbjct: 179 KGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDE 238

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A  +  E     L  D+  YS L+   C+ G  + A  LL EM   G+ PN++TY+ ++D
Sbjct: 239 AKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLD 298

Query: 553 AFGR 556
              +
Sbjct: 299 GLCK 302



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 192/439 (43%), Gaps = 44/439 (10%)

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G+   + T+NTLL  +C  A++  A ++  EM      P+V+TYST+I+G  K G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
              AL +  +M+  G   + V+YNT++    K     EA+    EM   GI  D  TY++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           +L G+   G+ +E   +F+QM    V PN +T++ LID   K  +  EA  +F    + G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           L+ DV  Y+AL+D  C    ++ A  L + M ++G  PNV +YN +I+   +S       
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKS------- 233

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ---------LVAEKAGQ 615
                  G+  E+  L A  S   K +     T + +++ F Q         L+ E    
Sbjct: 234 -------GRIDEAKGLLAEMSH--KSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSY 284

Query: 616 GKKENRCRQEI----LCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           G   N     I    LC  G       + + M + KI+PN+  ++ ++         E A
Sbjct: 285 GLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAA 344

Query: 665 SMLLEELRLFDNQVYGVAH-----GLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
             L   L +   Q   V +     GLL G   N   +A  LF E+ +      S  YN +
Sbjct: 345 RELFSNLFVKGIQPTVVTYTVMISGLLKGGLSN---EACELFREMAVNGCLPNSCTYNVI 401

Query: 720 TDMLWHFGQKRGAQLVVLE 738
                  G    A  ++ E
Sbjct: 402 IQGFLRNGDTPNAVRLIEE 420



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 161/338 (47%), Gaps = 5/338 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ +L    N G  ++A   F   V+R    N      + +I  L +   +  A  +FET
Sbjct: 118 YSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVT--FTILIDGLCKKRMISEAWLVFET 175

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
              +G    VY ++AL+  Y       EA  +FN M R    PN+ +YN +I+  C  G 
Sbjct: 176 MTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGR 235

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D      +  +M    + PD  T+++L+    + G  + A+ L  EM   G+  ++ TY
Sbjct: 236 ID--EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITY 293

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           + +LD +CK   +D AFE++  M    I PN+  Y+ +I+G    G+L+ A  +FS +  
Sbjct: 294 SIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFV 353

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI    V+Y  ++S   K G   EA  + +EM  +G   ++ TYN ++ G+ + G    
Sbjct: 354 KGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPN 413

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             R+ E+M     S +  T+  L D+ S   +  + M+
Sbjct: 414 AVRLIEEMVGKGFSADSSTFRMLSDLESSDEIISQFMR 451


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 195/352 (55%), Gaps = 3/352 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G +DLA ++ +          V  ++ +I A        +A+++F  M    ++PN
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +VTYN++I   C  G   +     +  DM+   + P+ +TF++L+    + G    A  L
Sbjct: 290 VVTYNSLIRCLCNYG--RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           ++EM+ R ID DIFTY++L++  C   ++D A  +   M +K+  PNVVTY+T+I G+ K
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           A R+++ + +F EM   G+  + V+YNT++    + G  + A  + K+M S G+  D +T
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y+ LL G  K GK ++   +FE ++   + P++ TY+ +I+   K G  ++   +F    
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             G+K +V++Y+ +I   C+ GL E A +L  EM ++G  PN  TYN++I A
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 233/489 (47%), Gaps = 27/489 (5%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++S + ++ K DL  ++ E   N      +Y+++ LI+ + R      A++V   M +  
Sbjct: 86  LLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLG 145

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +P++VT +++++    G       V + D M     QP+ +TFN+L+           A
Sbjct: 146 YEPDIVTLSSLLNGYCHGK-RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L + MV RG   D+FTY T+++ +CK   +DLA  ++ +M    I  +VV Y+T+ID 
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
                 ++DALN+F+EM   GI  + V+YN+++      GR+ +A  +  +M    I  +
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VT++AL+  + K+GK  E  +++++M    + P++ TYS+LI+ +       EA  +F 
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
                    +VV Y+ LI   CK   VE  + L  EM++ G+  N VTYN++I    ++ 
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444

Query: 559 TTE--------CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
             +           D V  D+     S  LD +C        + G+ +  ++ VF  L  
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDI--ITYSILLDGLC--------KYGKLEKALV-VFEYLQK 493

Query: 611 EKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
            K            E +C  G       +F  +    +KPNV+ ++ +++   R    E+
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553

Query: 664 ASMLLEELR 672
           A  L  E++
Sbjct: 554 ADALFREMK 562



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 209/408 (51%), Gaps = 19/408 (4%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA------SAMISILGR 205
           C  D +T+  ++  L  RG+   A+           +K ++GK+       + +I  L  
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLL--------KKMEKGKIEADVVIYTTIIDALCN 267

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
              V+ A N+F    N+G    V  +++LI      G   +A  + + M    + PN+VT
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNE 324
           ++A+IDA  K G       +++D+M++  + PD  T++SL+   C    L EA +++F  
Sbjct: 328 FSALIDAFVKEG-KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA-KHMFEL 385

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+ +    ++ TYNTL+   CK  +++   E+  EM  + +  N VTY+T+I G  +AG 
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
            D A  +F +M   G+  D ++Y+ +L    K G+ E+AL+V + ++ S +  D  TYN 
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++ G  K GK ++   +F  +    V PN++ Y+T+I  + + GL +EA  +FRE K+ G
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
              +   Y+ LI A  ++G   ++  L+ EM   G   +  T + +I+
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 205/429 (47%), Gaps = 41/429 (9%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           V++F +M+++   P  + FN LL+  ++   ++   +L   M +  I  D+++YN L++ 
Sbjct: 65  VDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINC 124

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C+ +Q+ LA  ++ +M      P++VT S++++GY    R+ +A+ +  +M  +    +
Sbjct: 125 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V++NT++       +  EA+ +   M + G + D  TY  ++ G  K+G  D    + +
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 244

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M+   +  +++ Y+T+ID         +A+ +F E    G++ +VV Y++LI  LC  G
Sbjct: 245 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDD-VERDLGKQ--KES 577
               A  LL +M +  I PNVVT++++IDAF   G+    E   D+ ++R +       S
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364

Query: 578 ANLDAMCSQD-------------DKDVQEAGRTDNQIIKVFG---------QLVAEKAGQ 615
           + ++  C  D              KD      T N +IK F          +L  E + +
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424

Query: 616 GKKENRCRQEILCILGVFQ------------KMHKLKIKPNVVTFSAILNACSRCNSFED 663
           G   N      L I G+FQ            KM    + P+++T+S +L+   +    E 
Sbjct: 425 GLVGNTVTYNTL-IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483

Query: 664 ASMLLEELR 672
           A ++ E L+
Sbjct: 484 ALVVFEYLQ 492



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 195/401 (48%), Gaps = 10/401 (2%)

Query: 137 RDDVSLG-DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQG 193
           R D+ L   +LKK E     AD   YT ++  L N    + A+  F     +  R N   
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
              +++I  L   G+   A  +    +       V  FSALI A+ + G   EA  +++ 
Sbjct: 293 --YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVD-FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
           M + ++ P++ TY+++I+  C    +D  KH+ E+   M+     P+ +T+N+L+    +
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL---MISKDCFPNVVTYNTLIKGFCK 407

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
               E    LF EM  RG+  +  TYNTL+  + +    D+A +I  +M +  + P+++T
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           YS ++DG  K G+L+ AL +F  ++   +  D  +YN ++    K G+ E+   +   + 
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G++ + + Y  ++ G+ ++G  +E   +F +MK D   PN  TY+TLI    + G   
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 587

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
            + ++ +E +  G   D    S +I+ L    L +S + +L
Sbjct: 588 ASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 203/467 (43%), Gaps = 96/467 (20%)

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           RG  + AA   + E + R         N LLD      ++D A ++  EM      P++V
Sbjct: 36  RGVYFSAASYDYREKLSR---------NVLLDL-----KLDDAVDLFGEMVQSRPLPSIV 81

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
            ++ ++   AK  + D  +++   M+ L I  D  SYN +++ + +  +   AL V  +M
Sbjct: 82  EFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKM 141

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI--------- 481
              G   D VT ++LL GY    +  E   + +QM      PN +T++TLI         
Sbjct: 142 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKA 201

Query: 482 -----------------DVYSKG----GLYKE-----AMQIFREFKQAGLKADVVLYSAL 515
                            D+++ G    GL K      A+ + ++ ++  ++ADVV+Y+ +
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGR-SATTECTVDDVERDL 571
           IDALC    V  A++L  EM  +GIRPNVVTYNS+I     +GR S  +    D +ER  
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-- 319

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV-AEKAGQGKKENRCRQEILCIL 630
              K + N+    +  D  V+E            G+LV AEK                  
Sbjct: 320 ---KINPNVVTFSALIDAFVKE------------GKLVEAEK------------------ 346

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL---RLFDNQVYGVAHGLLM 687
            ++ +M K  I P++ T+S+++N     +  ++A  + E +     F N V    + L+ 
Sbjct: 347 -LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV--TYNTLIK 403

Query: 688 GYRDNIWV-QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           G+     V + + LF E+        +  YN L   L+  G    AQ
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 229/456 (50%), Gaps = 23/456 (5%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           ++++ +I+   RSG   +A+ VF+ M    + PN +TYN +ID   KGG D +    + D
Sbjct: 195 FSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGG-DLEAGFRLRD 253

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            ML +G +P+ +T+N LL+   R G  +  R L +EM    +  D FTY+ L D + +  
Sbjct: 254 QMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTG 313

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +      + AE   K +     T S +++G  K G++  A  +   +   G+    V YN
Sbjct: 314 ESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYN 373

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+++ Y ++     A  + ++M+S  IR D +TYNAL+ G  K     +   +  +M+  
Sbjct: 374 TLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKS 433

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V P++ T++TLID Y   G  ++   +  + +Q G+K+DV+ + +++ A CKNG +  A
Sbjct: 434 GVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEA 493

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LD 581
           V++LD+M  + + PN   YNSIIDA+  S  TE     VE+ +     SA+       L 
Sbjct: 494 VAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEK-MKNSGVSASIVTYNLLLK 552

Query: 582 AMC--SQDDKDVQEAGRTDNQIIK----VFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
            +C  SQ D+  +      NQ ++     +  +++    +G  +          L + Q+
Sbjct: 553 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDK--------ALELLQE 604

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           M+K  I+P + T+  +++A +      D   L +++
Sbjct: 605 MNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 640



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 227/465 (48%), Gaps = 32/465 (6%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++    + +  L++G    +  ++ L+S   R+G   E   + + M  +++ P+  TY
Sbjct: 243 GDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTY 302

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           + + D   + G + + ++ +F + L+ GV     T + LL    + G    A  +   +V
Sbjct: 303 SILFDGLTRTG-ESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLV 361

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
           H G+      YNTL++  C+   +  AF I  +M +++I P+ +TY+ +I+G  K   + 
Sbjct: 362 HTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVT 421

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            A ++  EM+  G+     ++NT++  Y   G+ E+   V  +M+  GI+ D +++ +++
Sbjct: 422 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVV 481

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
             + K GK  E   + + M    V+PN   Y+++ID Y + G  ++A  +  + K +G+ 
Sbjct: 482 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVS 541

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
           A +V Y+ L+  LC++  ++ A  L+  +  +G+RP+VV+YN+II A        C   D
Sbjct: 542 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISAC-------CNKGD 594

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
            ++ L   +E          +   ++   RT       +  LV+  A  G+       ++
Sbjct: 595 TDKALELLQE---------MNKYGIRPTLRT-------YHTLVSALASAGRV-----HDM 633

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            C+   +Q+M    ++P+   +  +++A  RC +    + L +E+
Sbjct: 634 ECL---YQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEM 675



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 189/382 (49%), Gaps = 3/382 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L   L   GE    +  FA ++K+           S +++ L + GKV  A+ + E 
Sbjct: 302 YSILFDGLTRTGESRTMLSLFAESLKKGVMLG--AYTCSILLNGLCKDGKVAKAEQVLEM 359

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            ++ G   T   ++ LI+ Y +    + A  +F  MK  +++P+ +TYNA+I+   K  +
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K   ++  +M ++GV P   TFN+L+      G  E    + ++M  +GI  D+ ++ 
Sbjct: 420 VTK-AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 478

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +++ A CK  ++  A  I+ +M  K+++PN   Y+++ID Y ++G  + A  +  +MK  
Sbjct: 479 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNS 538

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+    V+YN +L    +  + +EA  +   + + G+R D V+YN ++     +G  D+ 
Sbjct: 539 GVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKA 598

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + ++M    + P L TY TL+   +  G   +   ++++     ++    +Y  ++DA
Sbjct: 599 LELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 658

Query: 519 LCKNGLVESAVSLLDEMTKEGI 540
             +        SL  EM+++GI
Sbjct: 659 YVRCENDSKVASLKKEMSEKGI 680



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 190/415 (45%), Gaps = 34/415 (8%)

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN--GVQPDRITFNSLLAVCSRGGLWEA 317
           +P+   +N V+ AC   G D    + +   M R+     PD  ++N ++A   R G    
Sbjct: 154 RPDTFAWNKVVQACVAAG-DLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSD 212

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +F+EMV  G+  +  TYNT++D   KG  ++  F +  +M      PN+VTY+ ++ 
Sbjct: 213 ALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLS 272

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  +AGR+D+   +  EM    +  D  +Y+ +     + G     L +  E    G+  
Sbjct: 273 GLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVML 332

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
            A T + LL G  K GK  +  ++ E +    + P  + Y+TLI+ Y +    + A  IF
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            + K   ++ D + Y+ALI+ LCK  +V  A  L+ EM K G+ P+V T+N++IDA+G +
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
              E                      C     D+Q+ G   + I   FG +V      GK
Sbjct: 453 GQLE---------------------KCFTVLSDMQQKGIKSDVI--SFGSVVKAFCKNGK 489

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                   I   + +   M    + PN   +++I++A       E A +L+E+++
Sbjct: 490 --------IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMK 536


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 195/352 (55%), Gaps = 3/352 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G +DLA ++ +          V  ++ +I A        +A+++F  M    ++PN
Sbjct: 214 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 273

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +VTYN++I   C  G   +     +  DM+   + P+ +TF++L+    + G    A  L
Sbjct: 274 VVTYNSLIRCLCNYG--RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 331

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           ++EM+ R ID DIFTY++L++  C   ++D A  +   M +K+  PNVVTY+T+I G+ K
Sbjct: 332 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 391

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           A R+++ + +F EM   G+  + V+YNT++    + G  + A  + K+M S G+  D +T
Sbjct: 392 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 451

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y+ LL G  K GK ++   +FE ++   + P++ TY+ +I+   K G  ++   +F    
Sbjct: 452 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 511

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             G+K +V++Y+ +I   C+ GL E A +L  EM ++G  PN  TYN++I A
Sbjct: 512 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 563



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 233/489 (47%), Gaps = 27/489 (5%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++S + ++ K DL  ++ E   N      +Y+++ LI+ + R      A++V   M +  
Sbjct: 70  LLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLG 129

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +P++VT +++++    G       V + D M     QP+ +TFN+L+           A
Sbjct: 130 YEPDIVTLSSLLNGYCHGK-RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 188

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L + MV RG   D+FTY T+++ +CK   +DLA  ++ +M    I  +VV Y+T+ID 
Sbjct: 189 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 248

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
                 ++DALN+F+EM   GI  + V+YN+++      GR+ +A  +  +M    I  +
Sbjct: 249 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 308

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VT++AL+  + K+GK  E  +++++M    + P++ TYS+LI+ +       EA  +F 
Sbjct: 309 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 368

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
                    +VV Y+ LI   CK   VE  + L  EM++ G+  N VTYN++I    ++ 
Sbjct: 369 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 428

Query: 559 TTE--------CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
             +           D V  D+     S  LD +C        + G+ +  ++ VF  L  
Sbjct: 429 DCDMAQKIFKKMVSDGVPPDI--ITYSILLDGLC--------KYGKLEKALV-VFEYLQK 477

Query: 611 EKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
            K            E +C  G       +F  +    +KPNV+ ++ +++   R    E+
Sbjct: 478 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 537

Query: 664 ASMLLEELR 672
           A  L  E++
Sbjct: 538 ADALFREMK 546



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 209/408 (51%), Gaps = 19/408 (4%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA------SAMISILGR 205
           C  D +T+  ++  L  RG+   A+           +K ++GK+       + +I  L  
Sbjct: 200 CQPDLFTYGTVVNGLCKRGDIDLALSLL--------KKMEKGKIEADVVIYTTIIDALCN 251

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
              V+ A N+F    N+G    V  +++LI      G   +A  + + M    + PN+VT
Sbjct: 252 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 311

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNE 324
           ++A+IDA  K G       +++D+M++  + PD  T++SL+   C    L EA +++F  
Sbjct: 312 FSALIDAFVKEG-KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA-KHMFEL 369

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+ +    ++ TYNTL+   CK  +++   E+  EM  + +  N VTY+T+I G  +AG 
Sbjct: 370 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 429

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
            D A  +F +M   G+  D ++Y+ +L    K G+ E+AL+V + ++ S +  D  TYN 
Sbjct: 430 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 489

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++ G  K GK ++   +F  +    V PN++ Y+T+I  + + GL +EA  +FRE K+ G
Sbjct: 490 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 549

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
              +   Y+ LI A  ++G   ++  L+ EM   G   +  T + +I+
Sbjct: 550 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 597



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 205/429 (47%), Gaps = 41/429 (9%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           V++F +M+++   P  + FN LL+  ++   ++   +L   M +  I  D+++YN L++ 
Sbjct: 49  VDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINC 108

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C+ +Q+ LA  ++ +M      P++VT S++++GY    R+ +A+ +  +M  +    +
Sbjct: 109 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 168

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V++NT++       +  EA+ +   M + G + D  TY  ++ G  K+G  D    + +
Sbjct: 169 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 228

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M+   +  +++ Y+T+ID         +A+ +F E    G++ +VV Y++LI  LC  G
Sbjct: 229 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 288

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDD-VERDLGKQ--KES 577
               A  LL +M +  I PNVVT++++IDAF   G+    E   D+ ++R +       S
Sbjct: 289 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 348

Query: 578 ANLDAMCSQD-------------DKDVQEAGRTDNQIIKVFG---------QLVAEKAGQ 615
           + ++  C  D              KD      T N +IK F          +L  E + +
Sbjct: 349 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 408

Query: 616 GKKENRCRQEILCILGVFQ------------KMHKLKIKPNVVTFSAILNACSRCNSFED 663
           G   N      L I G+FQ            KM    + P+++T+S +L+   +    E 
Sbjct: 409 GLVGNTVTYNTL-IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 467

Query: 664 ASMLLEELR 672
           A ++ E L+
Sbjct: 468 ALVVFEYLQ 476



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 195/401 (48%), Gaps = 10/401 (2%)

Query: 137 RDDVSLG-DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQG 193
           R D+ L   +LKK E     AD   YT ++  L N    + A+  F     +  R N   
Sbjct: 217 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 276

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
              +++I  L   G+   A  +    +       V  FSALI A+ + G   EA  +++ 
Sbjct: 277 --YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 334

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVD-FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
           M + ++ P++ TY+++I+  C    +D  KH+ E+   M+     P+ +T+N+L+    +
Sbjct: 335 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL---MISKDCFPNVVTYNTLIKGFCK 391

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
               E    LF EM  RG+  +  TYNTL+  + +    D+A +I  +M +  + P+++T
Sbjct: 392 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 451

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           YS ++DG  K G+L+ AL +F  ++   +  D  +YN ++    K G+ E+   +   + 
Sbjct: 452 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 511

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G++ + + Y  ++ G+ ++G  +E   +F +MK D   PN  TY+TLI    + G   
Sbjct: 512 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 571

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
            + ++ +E +  G   D    S +I+ L    L +S + +L
Sbjct: 572 ASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 612



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 203/467 (43%), Gaps = 96/467 (20%)

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           RG  + AA   + E + R         N LLD      ++D A ++  EM      P++V
Sbjct: 20  RGVYFSAASYDYREKLSR---------NVLLDL-----KLDDAVDLFGEMVQSRPLPSIV 65

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
            ++ ++   AK  + D  +++   M+ L I  D  SYN +++ + +  +   AL V  +M
Sbjct: 66  EFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKM 125

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI--------- 481
              G   D VT ++LL GY    +  E   + +QM      PN +T++TLI         
Sbjct: 126 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKA 185

Query: 482 -----------------DVYSKG----GLYKE-----AMQIFREFKQAGLKADVVLYSAL 515
                            D+++ G    GL K      A+ + ++ ++  ++ADVV+Y+ +
Sbjct: 186 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 245

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGR-SATTECTVDDVERDL 571
           IDALC    V  A++L  EM  +GIRPNVVTYNS+I     +GR S  +    D +ER  
Sbjct: 246 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-- 303

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV-AEKAGQGKKENRCRQEILCIL 630
              K + N+    +  D  V+E            G+LV AEK                  
Sbjct: 304 ---KINPNVVTFSALIDAFVKE------------GKLVEAEK------------------ 330

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL---RLFDNQVYGVAHGLLM 687
            ++ +M K  I P++ T+S+++N     +  ++A  + E +     F N V    + L+ 
Sbjct: 331 -LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV--TYNTLIK 387

Query: 688 GYRDNIWV-QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           G+     V + + LF E+        +  YN L   L+  G    AQ
Sbjct: 388 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 434


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 138/513 (26%), Positives = 246/513 (47%), Gaps = 45/513 (8%)

Query: 172 WSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAF 231
           W+KA+Q    A          G L  A+ ++L R+G+ + A                +++
Sbjct: 161 WNKAVQACVAA----------GDLDEAL-AMLRRMGRSEGAPP-----------PDAFSY 198

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           + +I+   RSG   +A+ VF+ M    + PN +TYN +ID   KGG D +    + D ML
Sbjct: 199 NVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGG-DLEAGFRLRDQML 257

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
           ++G +P+ +T+N LL+   R G  +  R L +EM    +  D FTY+ L D + +     
Sbjct: 258 QDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSR 317

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
               +  E   K +     T S +++G  K G++  A  +   +   G+      YNT++
Sbjct: 318 TMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLI 377

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           + Y ++   + A  + ++M+S  IR D +TYNAL+ G  K     E   +  +M+   V 
Sbjct: 378 NGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVD 437

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P++ T++TLID Y + G  ++   +  + +  G+K++V+ + +++ A CKNG +  AV++
Sbjct: 438 PSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAI 497

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LDAMC 584
           LD+M  + + PN   YNSIIDA+  S  TE     VE+ +     SA+       L  +C
Sbjct: 498 LDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEK-MKSSGVSASIFTYNLLLKGLC 556

Query: 585 --SQDDKDVQEAGRTDNQIIK----VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
             SQ D+  +      NQ ++     +  +++    +G  +          L + Q+MHK
Sbjct: 557 KNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDR--------ALELLQEMHK 608

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             I+P + T+  +L+A        D   L + +
Sbjct: 609 YDIRPTLRTYHPLLSALGSAGRVHDMECLYQHM 641



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 190/415 (45%), Gaps = 34/415 (8%)

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN--GVQPDRITFNSLLAVCSRGGLWEA 317
           +P+   +N  + AC   G D    + +   M R+     PD  ++N ++A   R G    
Sbjct: 155 RPDTFAWNKAVQACVAAG-DLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSD 213

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +F+EMV RG+  +  TYNT++D   KG  ++  F +  +M      PNVVTY+ ++ 
Sbjct: 214 ALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLS 273

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  +AGR+D+   +  EM    +  D  +Y+ +     + G     L +  E    G+  
Sbjct: 274 GLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVII 333

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
            A T + LL G  K GK  +  ++ E +    + P    Y+TLI+ Y +    + A  IF
Sbjct: 334 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIF 393

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            + K   ++ D + Y+ALI+ LCK  ++  A  L+ EM K G+ P+V T+N++IDA+GR+
Sbjct: 394 EQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRA 453

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
              E                      C     D+Q+ G   N I   FG +V      GK
Sbjct: 454 GQLE---------------------KCFTVLSDMQDKGIKSNVI--SFGSVVKAFCKNGK 490

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                   I   + +   M    + PN   +++I++A       E A +L+E+++
Sbjct: 491 --------IPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMK 537



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 171/354 (48%), Gaps = 3/354 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +   L R G      ++F  +L +G     Y  S L++   + G   +A  V   +  
Sbjct: 304 SILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVH 363

Query: 257 YNLKPNLVTYNAVIDACGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             L P    YN +I+  G   V D +    IF+ M    ++PD IT+N+L+    +  + 
Sbjct: 364 TGLVPTTAIYNTLIN--GYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMI 421

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A +L  EM   G+D  + T+NTL+DA  +  Q++  F ++++M  K I  NV+++ ++
Sbjct: 422 TEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSV 481

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +  + K G++ +A+ +  +M    +  +   YN+++  Y + G  E+A L+ ++M+SSG+
Sbjct: 482 VKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGV 541

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
                TYN LL G  K  + DE   +   +    + P++++Y+T+I      G    A++
Sbjct: 542 SASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALE 601

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
           + +E  +  ++  +  Y  L+ AL   G V     L   M  + + P+   Y +
Sbjct: 602 LLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGT 655



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 181/399 (45%), Gaps = 48/399 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L   L   G+    +  F  ++K+           S +++ L + GKV  A+ + E 
Sbjct: 303 YSILFDGLTRTGDSRTMLSLFGESLKKGVIIG--AYTCSILLNGLCKDGKVAKAEQVLEM 360

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            ++ G   T   ++ LI+ Y +    Q A S+F  MK  +++P+ +TYNA+I+   K   
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCK--- 417

Query: 279 DFKHVVEIFD---DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
             + + E  D   +M ++GV P   TFN+L+    R G  E    + ++M  +GI  ++ 
Sbjct: 418 -MEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVI 476

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           ++ +++ A CK  ++  A  I+ +M  K++ PN   Y+++ID Y ++G  + A  +  +M
Sbjct: 477 SFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKM 536

Query: 396 KFLGI---------------------------------GL--DRVSYNTVLSIYAKLGRF 420
           K  G+                                 GL  D VSYNT++S     G  
Sbjct: 537 KSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDT 596

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           + AL + +EM    IR    TY+ LL   G  G+  ++  +++ M    V P+   Y T 
Sbjct: 597 DRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGTR 656

Query: 481 IDVYSKGGLYKEAMQ----IFREFKQAGLKADVVLYSAL 515
            +  SK    K+ M      F + ++  L+ D ++ S +
Sbjct: 657 CENESKVASLKKEMSEKGIAFDDTERTNLELDRIIASPI 695


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 186/332 (56%), Gaps = 3/332 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           +  ++ LI+AY R G  +EA  + NS     ++P L+TYNA++    K G  +    ++ 
Sbjct: 292 IVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIG-KYDRAKDVL 350

Query: 288 DDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
            +ML+ G+ P+  T+N+LL  +C R  + EA + +F+EM  RG+  D+ ++++L+  + +
Sbjct: 351 IEMLQLGLTPNAATYNTLLVEICRRDNILEA-QEIFDEMSRRGVLPDLVSFSSLIGVLAR 409

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +  A     EM    I P+ V Y+ +IDG+ + G L DAL M  EM   G  +D V+
Sbjct: 410 NGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVT 469

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNT L+   K   F +A ++  EM   G+  D  T+  L+ GY K G  D+   +FE M 
Sbjct: 470 YNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMV 529

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + P+ +TY+TLID + K G    A +++ +  +  +  D + Y  +++  C +GL+ 
Sbjct: 530 RTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLP 589

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            A++L D+M ++GIRPN+VT N++I  + RS 
Sbjct: 590 EALNLCDQMLEKGIRPNLVTCNTLIKGYCRSG 621



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 186/342 (54%), Gaps = 1/342 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ IF+     G    + +FS+LI    R+G+  +A+  F  M+R  + P+ V Y  +ID
Sbjct: 381 AQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILID 440

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              + G      +++ D+ML  G   D +T+N+ L    +  ++  A  LFNEMV RG+ 
Sbjct: 441 GFCRNGA-LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMV 499

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D +T+ TL+   CK   MD A  +   M   N+ P+ VTY+T+IDG+ KAG +  A  +
Sbjct: 500 PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKEL 559

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           + +M    I  D +SY TVL+ +   G   EAL +C +M   GIR + VT N L+ GY +
Sbjct: 560 WDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCR 619

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G   +      +M ++ + P+  +Y+TLID Y K    ++A  +  E ++ GL+ +++ 
Sbjct: 620 SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT 679

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           Y+ +++  C  G ++ A  +L +M + GI P+  TY+S+I+ 
Sbjct: 680 YNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 211/417 (50%), Gaps = 17/417 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A++  L ++GK D AK++    L  G       ++ L+    R     EA  +F+ M R
Sbjct: 331 NAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSR 390

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P+LV+++++I    + G  ++ ++  F +M R+G+ PD + +  L+    R G   
Sbjct: 391 RGVLPDLVSFSSLIGVLARNGHLYQALMH-FREMERSGIVPDNVIYTILIDGFCRNGALS 449

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  + +EM+ RG   D+ TYNT L+ +CK      A  +  EM  + + P+  T++T+I
Sbjct: 450 DALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLI 509

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            GY K G +D ALN+F  M    +  D+V+YNT++  + K G    A  +  +M    I 
Sbjct: 510 RGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDII 569

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D ++Y  +L G+   G   E   + +QM    + PNL+T +TLI  Y + G   +A + 
Sbjct: 570 PDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEY 629

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             +    G+  D   Y+ LID   K   +E A  L++EM K G++ N++TYN I++ F  
Sbjct: 630 LSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF-- 687

Query: 557 SATTECTVDDVERDLGKQKE----------SANLDAMCSQDDKDVQEAGRTDNQIIK 603
               E  + + E+ L K  E          S+ ++   SQD  +++EA R  +++++
Sbjct: 688 --CAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQD--NMKEAFRFHDEMLQ 740



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 187/343 (54%), Gaps = 1/343 (0%)

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
           F+    +G   ++ A + L+    R+G+   A  ++  + R  ++ N+ T N +++A  K
Sbjct: 210 FQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCK 269

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
               F++V+    DM   GV  D +T+N+L+    R GL E A  L N    RG++  + 
Sbjct: 270 DR-KFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLL 328

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYN +L  +CK  + D A +++ EM    ++PN  TY+T++    +   + +A  +F EM
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM 388

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G+  D VS+++++ + A+ G   +AL+  +EME SGI  D V Y  L+ G+ + G  
Sbjct: 389 SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGAL 448

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            +  +M ++M A     +++TY+T ++   K  ++ +A  +F E  + G+  D   ++ L
Sbjct: 449 SDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTL 508

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           I   CK+G ++ A++L + M +  ++P+ VTYN++ID F ++ 
Sbjct: 509 IRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAG 551



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 193/387 (49%), Gaps = 31/387 (8%)

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           E F  + R GV       N LL    R G  + A  ++ E+V  GI+ +++T N +++A+
Sbjct: 208 EAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNAL 267

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK  + +     +++M  K +  ++VTY+T+I+ Y + G +++A  + +     G+    
Sbjct: 268 CKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGL 327

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           ++YN +L    K+G+++ A  V  EM   G+  +A TYN LL    ++    E + +F++
Sbjct: 328 LTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDE 387

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    V P+L+++S+LI V ++ G   +A+  FRE +++G+  D V+Y+ LID  C+NG 
Sbjct: 388 MSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGA 447

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           +  A+ + DEM   G   +VVTYN+ ++                  L K+K  A+ D + 
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNG-----------------LCKKKMFADADMLF 490

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
           ++    + E G   +     F  L+      G  +          L +F+ M +  +KP+
Sbjct: 491 NE----MVERGMVPD--FYTFTTLIRGYCKDGNMDKA--------LNLFEAMVRTNLKPD 536

Query: 645 VVTFSAILNACSRCNSFEDASMLLEEL 671
            VT++ +++   +      A  L +++
Sbjct: 537 KVTYNTLIDGFCKAGEMGRAKELWDDM 563



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 144/325 (44%), Gaps = 46/325 (14%)

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            + Y+ L+  Y +  K  E    F+ ++   VS ++   + L+    + G    A +I+ 
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E  + G++ +V   + +++ALCK+   E+ +  L +M  +G+  ++VTYN++I+A+ R  
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306

Query: 559 TTECTVDDVER------DLGKQKESANLDAMCSQDDKD--------VQEAGRTDNQIIKV 604
             E     +        + G    +A L  +C     D        + + G T N     
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNA--AT 364

Query: 605 FGQLVAEKAGQGKKENRCRQE-ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           +  L+ E          CR++ IL    +F +M +  + P++V+FS+++   +R      
Sbjct: 365 YNTLLVEI---------CRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQ 415

Query: 664 ASMLLEELR----LFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVK----LMDSSTASA 714
           A M   E+     + DN +Y +   L+ G+ R+     AL + DE+      MD  T + 
Sbjct: 416 ALMHFREMERSGIVPDNVIYTI---LIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472

Query: 715 FYNAL--------TDMLWHFGQKRG 731
           F N L         DML++   +RG
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERG 497


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 227/453 (50%), Gaps = 26/453 (5%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           F  L   Y  +G  ++++     M+ +        YN++IDA  K G   K  + ++  M
Sbjct: 57  FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQK-ALAVYRVM 115

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
            ++G++PD  TFN L+    +    ++   LF EM ++    ++ TY+ L+DA+CK   +
Sbjct: 116 GQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGV 175

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           + A ++  +M ++   PN+ TY++MIDG  K+G +D A  +F EM   G+   RV YN++
Sbjct: 176 EKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSL 235

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +    + GR + A  + +EM S G++ D VT+ +L+ G G  G+  E RR+F++ +    
Sbjct: 236 IHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGC 295

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           + ++  Y+ LID   K     EA +IF E ++ GL  DV  ++AL+D LCK+G +  A  
Sbjct: 296 ALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFI 355

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV--ERDLGKQKESANLDAMCSQDD 588
           LL +M + G  P+V  YN++ID   +S   E     +   + LG + +    + +  +  
Sbjct: 356 LLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESC 415

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI---LCILGVFQKMHKL------ 639
           K     GR ++ +     +L  E + +G         I   LC+ G   + +KL      
Sbjct: 416 K----GGRIEDAL-----RLFEEISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQ 466

Query: 640 -----KIKPNVVTFSAILNACSRCNSFEDASML 667
                 I P+ VT++ +LN   +    E A+ L
Sbjct: 467 ETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 154/319 (48%), Gaps = 44/319 (13%)

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GYA AG L+ ++     M+     L   +YN+++  + K G  ++AL V + M  SG+R 
Sbjct: 63  GYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRP 122

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  T+N L+  + K  + D V ++FE+M+    SPN++TYS LID   K G  ++A+++F
Sbjct: 123 DTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVF 182

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            + K  G + ++  Y+++ID L K+G V+ A  L +EMT EG+    V YNS+I   GRS
Sbjct: 183 LDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRS 242

Query: 558 ATTECTVDDVERDLGK--QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
              +         L K  Q +     ++                    V+G  VA +A +
Sbjct: 243 GRADAAAKLFREMLSKGLQPDHVTFTSL--------------------VYGLGVAGRASE 282

Query: 616 GKKENRCRQEILCILGV----------------------FQKMHKLKIKPNVVTFSAILN 653
            ++  +  +++ C L V                      F ++ +  + P+V TF+A+++
Sbjct: 283 ARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMD 342

Query: 654 ACSRCNSFEDASMLLEELR 672
              +     DA +LL +++
Sbjct: 343 GLCKSGRIHDAFILLGDMK 361


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 156/605 (25%), Positives = 276/605 (45%), Gaps = 54/605 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L R   +D A  +  + +++G    +Y +  LI+ +      +EA  +   M  
Sbjct: 254 NVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMID 313

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             LKP  +TYNA+ID   + G D +    I D+M+  G++ + I +N+LL    + G  E
Sbjct: 314 VGLKPEPITYNALIDGFMRQG-DIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKME 372

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +  EM+ +G++ D  TY+ L++  C+G  M  AFE++ EM  + ++P V+TYS +I
Sbjct: 373 KALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVII 432

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G  + G L     +  EM   G+  + V Y T+++ +AK GR EE+ ++ + M   GI 
Sbjct: 433 NGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGIL 492

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D   YN+L+ G+ K  + +E R    +M    + PN  TY   ID YSK G  + A + 
Sbjct: 493 PDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRY 552

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F E    G+  +V +Y+ALI+  CK G V  A S+   +    +  +V TY+ +I    R
Sbjct: 553 FNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSR 612

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
           +              GK  E+  + +       ++QE G   N     +  L++    QG
Sbjct: 613 N--------------GKMHEAFGIFS-------ELQEKGLLPNAF--TYNSLISGSCKQG 649

Query: 617 KKENRCR-QEILCILGV--------------------------FQKMHKLKIKPNVVTFS 649
             +   +  E +CI G+                          F  +    + PN VT++
Sbjct: 650 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 709

Query: 650 AILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLM 707
           A+++   +  +   A  LLEE+ L         + +++ +  ++  + +AL LF E+ L 
Sbjct: 710 AMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM-LE 768

Query: 708 DSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAM 767
               ++  +N L +     G+ + A  ++ E   +Q   N  + + L  H   +G     
Sbjct: 769 KGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEA 828

Query: 768 VHAWL 772
              WL
Sbjct: 829 KRLWL 833



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 191/383 (49%), Gaps = 4/383 (1%)

Query: 186 EERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           E R         A I    + G++++A   F   L+ G    V  ++ALI  + + G   
Sbjct: 523 ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 582

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           EA SVF  +    +  ++ TY+ +I    + G        IF ++   G+ P+  T+NSL
Sbjct: 583 EAFSVFRFILSRRVLQDVQTYSVLIHGLSRNG-KMHEAFGIFSELQEKGLLPNAFTYNSL 641

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           ++   + G  + A  L  EM  +GI+ DI TYN L+D +CK  +++ A  +  ++  + +
Sbjct: 642 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 701

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           +PN VTY+ M+DGY K+     A  +  EM   G+  D   YN +L+   K  +FE+AL 
Sbjct: 702 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 761

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + +EM   G     V++N L+ GY K GK  E   + E+M      PN +TY++LID   
Sbjct: 762 LFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 820

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G+  EA +++ E ++  +      Y++L+      G +    +L +EM  +GI P+ +
Sbjct: 821 KAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 880

Query: 546 TYNSIIDAFGRSATT--ECTVDD 566
           TY  +IDA+ R       C + D
Sbjct: 881 TYYVMIDAYCREGNVMEACKLKD 903



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 157/611 (25%), Positives = 281/611 (45%), Gaps = 78/611 (12%)

Query: 133 TAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQ 192
           T+ A+ D+   D+L      LC ++ Y          G  S  I+C          +N  
Sbjct: 85  TSTAQQDL---DVLSALAVNLCNSNWY----------GPASDLIKCII--------RNSD 123

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
             LA     +LG + K   + N        G  N+V  F  L+ +Y + G+  EA++VF 
Sbjct: 124 SPLA-----VLGSIVKCYRSCN--------GSPNSV-IFDMLMDSYRKMGFLVEAVNVFL 169

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV-CSR 311
             K +  +P+L++ N+++    KG    +   ++FD M  + V PD  T+ ++++  C  
Sbjct: 170 GPKNFEFRPSLLSCNSLLGDLLKGN-KVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKV 228

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
           G + +A R L  EM  +G   ++ TYN ++  +C+   +D A E+   M  K + P++ T
Sbjct: 229 GNVKDAKRVLL-EMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYT 287

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y  +I+G+    R  +A  M  EM  +G+  + ++YN ++  + + G  E+A  +  EM 
Sbjct: 288 YDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMV 347

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           + GI  + + +N LL G  K GK ++   + ++M    V P+  TYS LI+ + +G    
Sbjct: 348 ACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMA 407

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            A ++  E K+  L   V+ YS +I+ LC+ G ++   ++L EM   G++PN V Y +++
Sbjct: 408 RAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLM 467

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANL-DAMCSQD-------DKDVQEAGRTDNQIIK 603
            A  +    E  V++    L + +E   L D  C           K ++EA     ++++
Sbjct: 468 TAHAK----EGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE 523

Query: 604 --------VFGQLV--AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
                    +G  +    KAG+ +  +R           F +M    + PNV  ++A++ 
Sbjct: 524 RRLRPNAHTYGAFIDGYSKAGEMEIADR----------YFNEMLSCGVLPNVGIYTALIE 573

Query: 654 A-CSRCNSFEDASM---LLEELRLFDNQVYGV-AHGLLMGYRDNIWVQALSLFDEVKLMD 708
             C   N  E  S+   +L    L D Q Y V  HGL    R+    +A  +F E++   
Sbjct: 574 GHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGL---SRNGKMHEAFGIFSELQEKG 630

Query: 709 SSTASAFYNAL 719
               +  YN+L
Sbjct: 631 LLPNAFTYNSL 641



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 193/408 (47%), Gaps = 14/408 (3%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASA-----MISILGRLGKVDLAK 213
            Y+ L+  L   G+  +A   F+          ++G L +A     +IS   + G VD A 
Sbjct: 603  YSVLIHGLSRNGKMHEAFGIFS-------ELQEKGLLPNAFTYNSLISGSCKQGNVDKAS 655

Query: 214  NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
             + E    +G    +  ++ LI    ++G  + A ++F+ ++   L PN VTY A++D  
Sbjct: 656  QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGY 715

Query: 274  GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
             K   +     ++ ++ML  GV PD   +N +L  C +   +E A +LF EM+ +G    
Sbjct: 716  CKSK-NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAST 774

Query: 334  IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
            + ++NTL++  CK  ++  A  ++ EM  K   PN VTY+++ID   KAG + +A  ++ 
Sbjct: 775  V-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWL 833

Query: 394  EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            EM+   +     +Y ++L  Y  +G   E   + +EM + GI  D +TY  ++  Y ++G
Sbjct: 834  EMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREG 893

Query: 454  KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
               E  ++ +++    +  ++  Y  LI    K   + E +++  E  ++G +  +   S
Sbjct: 894  NVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCS 953

Query: 514  ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             +       G ++ A  +L  M K G   N  +   ++D     A +E
Sbjct: 954  VIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSE 1001



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 155/337 (45%), Gaps = 2/337 (0%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            +I  L + G+++ AKN+F+     G       ++A++  Y +S     A  +   M    
Sbjct: 676  LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 735

Query: 259  LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            + P+   YN +++ C K    F+  +++F +ML  G     ++FN+L+    + G  + A
Sbjct: 736  VPPDAFIYNVILNFCCKEE-KFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEA 793

Query: 319  RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +L  EM+ +    +  TY +L+D  CK   M  A  +  EM  +N+ P   TY++++ G
Sbjct: 794  NHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHG 853

Query: 379  YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
            Y   G + +   +F EM   GI  D+++Y  ++  Y + G   EA  +  E+   G+   
Sbjct: 854  YHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMS 913

Query: 439  AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
               Y+AL+    K+ ++ EV ++  ++        L T S +   +   G   EA ++ R
Sbjct: 914  VAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLR 973

Query: 499  EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
               + G  ++      L+D        E + +LL +M
Sbjct: 974  SMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 216/403 (53%), Gaps = 9/403 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           +T L+  L    + S+A+      V+R   K  Q  L +  A+I+ L + G+ DLA N+ 
Sbjct: 173 FTTLVHGLFQHNKASEAVA----LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
                      V  +S +I +  +  +  +A+++F  M    ++P++ TY+++I   C  
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G   +     +  DML   + P+ +TFNSL+   ++ G    A  LF+EM+ R ID +I 
Sbjct: 289 G--RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYN+L++  C   ++D A +I   M +K+  P+VVTY+T+I+G+ KA ++ D + +F +M
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G+  + V+Y T++  + +    + A +V K+M S G+  + +TYN LL G  K GK 
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           ++   +FE ++   + P++ TY+ + +   K G  ++   +F      G+K DV+ Y+ +
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           I   CK GL E A +L  +M ++G  P+  TYN++I A  R  
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 255/544 (46%), Gaps = 34/544 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++S + ++ K DL  +  E     G  + +Y ++ +I+   R      A+++   M +
Sbjct: 69  SKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMK 128

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++VT N++++    G       V + D M+  G QPD +TF +L+    +     
Sbjct: 129 LGYGPSIVTLNSLLNGFCHGN-RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L   MV +G   D+ TY  +++ +CK  + DLA  ++ +M    I  +VV YST+I
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D   K   +DDALN+F+EM   GI  D  +Y++++S     GR+ +A  +  +M    I 
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + VT+N+L+  + K+GK  E  ++F++M    + PN++TY++LI+ +       EA QI
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F          DVV Y+ LI+  CK   V   + L  +M++ G+  N VTY ++I  F +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
           +  ++C   D  + + KQ  S  +                  +  I  +  L+      G
Sbjct: 428 A--SDC---DNAQMVFKQMVSDGV------------------HPNIMTYNTLLDGLCKNG 464

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
           K E          + VF+ + K K++P++ T++ +     +    ED   L   L L   
Sbjct: 465 KLEKA--------MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516

Query: 677 QVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
           +   +A+  ++ G+ +  +  +A +LF ++K       S  YN L       G K  +  
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 576

Query: 735 VVLE 738
           ++ E
Sbjct: 577 LIKE 580



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 203/407 (49%), Gaps = 34/407 (8%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           V++F +M+++   P  + F+ LL+  ++   ++   +   +M   G+  +++TYN +++ 
Sbjct: 50  VDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINC 109

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +C+ +Q+  A  I+ +M      P++VT +++++G+    R+ +A+ +  +M  +G   D
Sbjct: 110 LCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 169

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V++ T++    +  +  EA+ + + M   G + D VTY A++ G  K+G+ D    +  
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M+   +  +++ YST+ID   K     +A+ +F E    G++ DV  YS+LI  LC  G
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDD-VERDLGKQKESAN 579
               A  LL +M +  I PNVVT+NS+IDAF   G+    E   D+ ++R +     + N
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349

Query: 580 --LDAMCSQD-------------DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
             ++  C  D              KD      T N +I  F +  A+K   G        
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK--AKKVVDG-------- 399

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                + +F+ M +  +  N VT++ +++   + +  ++A M+ +++
Sbjct: 400 -----MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 198/446 (44%), Gaps = 35/446 (7%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           EA+ +F  M +    P++V ++ ++ A  K    F  V+   + M   GV  +  T+N +
Sbjct: 48  EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK-KFDLVISFGEKMEILGVSHNLYTYNIM 106

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    R      A  +  +M+  G    I T N+LL+  C G ++  A  ++ +M     
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            P+ VT++T++ G  +  +  +A+ +   M   G   D V+Y  V++   K G  + AL 
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           +  +ME   I  D V Y+ ++    K    D+   +F +M    + P++ TYS+LI    
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
             G + +A ++  +  +  +  +VV +++LIDA  K G +  A  L DEM +  I PN+V
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346

Query: 546 TYNSIIDAFGRS-------------ATTECTVDDVERDL---GKQKESANLDAMCSQDDK 589
           TYNS+I+ F                 + +C  D V  +    G  K    +D M  +  +
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM--ELFR 404

Query: 590 DVQEAGRTDNQIIK---VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
           D+   G   N +     + G   A      +              VF++M    + PN++
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM-------------VFKQMVSDGVHPNIM 451

Query: 647 TFSAILNACSRCNSFEDASMLLEELR 672
           T++ +L+   +    E A ++ E L+
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQ 477



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 169/356 (47%), Gaps = 37/356 (10%)

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A +LF EMV       I  ++ LL AI K  + DL      +M    +S N+ TY+ M
Sbjct: 47  DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+   +  +L  AL +  +M  LG G   V+ N++L+ +    R  EA+ +  +M   G 
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D VT+  L+ G  +  K  E   + E+M      P+L+TY  +I+   K G    A+ 
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-- 553
           +  + ++  ++ADVV+YS +ID+LCK   V+ A++L  EM  +GIRP+V TY+S+I    
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286

Query: 554 -FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
            +GR +       D  R L    E                   R  N  +  F  L+   
Sbjct: 287 NYGRWS-------DASRLLSDMLE-------------------RKINPNVVTFNSLIDAF 320

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
           A +GK        ++    +F +M +  I PN+VT+++++N     +  ++A  + 
Sbjct: 321 AKEGK--------LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 141/549 (25%), Positives = 261/549 (47%), Gaps = 43/549 (7%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDF 280
           +G    V +++ +I      G   +A ++FN M +  + PN+VTYN+++ A C    +D 
Sbjct: 266 DGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDK 325

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
             +V     M  N +QPD +T+ +++   S  G W+ A  +F EM   G+  DI T+N+L
Sbjct: 326 AELV--LRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +D++CK  +   A EI   +  K   P++++YS ++ GYA  GR  D  N+F  M   GI
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D   +N +++ +AK G  +EALL+  EM   G+  + VTY  ++    + G+  +   
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAME 503

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL-KADVVLYSALIDAL 519
              QM +  + PN + Y +LI  +   G   +A ++  E    G+ + ++  +S++I +L
Sbjct: 504 KLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSL 563

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
           C  G V +A  + + +   G RP++ T+NS+ID +       C V  +++  G       
Sbjct: 564 CNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGY-------CLVGKMDKAFGV------ 610

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
           LDAM S        AG T+  ++  +  L+      G+ ++         L +F++M   
Sbjct: 611 LDAMVS--------AG-TEPDVV-TYSTLINGYFKSGRIDDG--------LILFREMLCK 652

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVYGVAHGLLMGY-RDNIW 694
           ++KP  VT+S +L+   R      A  +  E+           Y +   +L G  R+N  
Sbjct: 653 RVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTI---ILQGLCRNNCT 709

Query: 695 VQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
            +A++LF ++  M+     A  N +   L+   ++  A  +        +  N  +   +
Sbjct: 710 DEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVM 769

Query: 755 DLHLMSSGA 763
            ++L+  G+
Sbjct: 770 IINLLKEGS 778



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 231/499 (46%), Gaps = 58/499 (11%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKRYNLKPNL 263
           R  + DL    F   L  G        +  +     +    EA+S + + M      P+ 
Sbjct: 177 RARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDA 236

Query: 264 VTYNAVIDA-CGKGGVDFKHVVEIFDDMLR----NGVQPDRITFNSLLAVCSRGGLWEAA 318
            +YN VI + CG          E  D +LR    +G  PD +++  ++      G    A
Sbjct: 237 FSYNTVIKSLCGGSRSQ-----EALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKA 291

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            NLFNEMV +G+  ++ TYN+++ A+CK   MD A  ++ +M   +I P+ VTY+ MI G
Sbjct: 292 CNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHG 351

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y+  GR  +A  MF EM   G+  D V++N+++    K  R +EA  +   + + G + D
Sbjct: 352 YSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPD 411

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            ++Y+ LL GY  +G++ ++  +F  M  + +  +   ++ LI+ ++K G+  EA+ IF 
Sbjct: 412 IISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFT 471

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E +  G+  +VV Y+ +I ALC+ G +  A+  L +M   G++PN V Y+S+I  F    
Sbjct: 472 EMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGF---- 527

Query: 559 TTECTVDDVERDLGKQKE------------------SANLDAMCSQDDKDVQEAGRTDNQ 600
              CT      DL K KE                  S+ + ++C  ++  V  A    N 
Sbjct: 528 ---CT----HGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLC--NEGRVMNAQDVFNL 578

Query: 601 IIKV--------FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
           +I +        F  L+      GK +           GV   M     +P+VVT+S ++
Sbjct: 579 VIHIGDRPDIFTFNSLIDGYCLVGKMDKA--------FGVLDAMVSAGTEPDVVTYSTLI 630

Query: 653 NACSRCNSFEDASMLLEEL 671
           N   +    +D  +L  E+
Sbjct: 631 NGYFKSGRIDDGLILFREM 649



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 212/464 (45%), Gaps = 41/464 (8%)

Query: 136 ARDDVSLGDILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQG 193
           +R   +L  +L+  +   C  D   YT ++  L   GE SKA   F   V++    N   
Sbjct: 250 SRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVT 309

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
              ++++  L +   +D A+ +     +         ++A+I  Y   G  +EA  +F  
Sbjct: 310 Y--NSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKE 367

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           M R  L P++VT+N+++D+  K     K   EIF  +   G +PD I+++ LL   +  G
Sbjct: 368 MTREGLIPDIVTFNSLMDSLCKHKRS-KEAAEIFHSIATKGHKPDIISYSILLHGYATEG 426

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            +    NLF+ M   GI  D   +N L++A  K   MD A  I  EM  + +SPNVVTY+
Sbjct: 427 RFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYA 486

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+I    + GRL DA+   S+M  +G+  + V Y++++  +   G   +A  +  EM   
Sbjct: 487 TVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQ 546

Query: 434 GI------------------------------------RKDAVTYNALLGGYGKQGKYDE 457
           GI                                    R D  T+N+L+ GY   GK D+
Sbjct: 547 GIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDK 606

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              + + M +    P+++TYSTLI+ Y K G   + + +FRE     +K   V YS ++D
Sbjct: 607 AFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLD 666

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            L + G   +A  +  EM + G   ++ TY  I+    R+  T+
Sbjct: 667 GLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTD 710



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 175/356 (49%), Gaps = 6/356 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+   + G +D A  IF     +G    V  ++ +I+A  R G   +A+   + M    
Sbjct: 453 LINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIG 512

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL--AVCSRGGLW 315
           LKPN V Y+++I   C  G  D     E+  +M+  G+    ITF S +  ++C+ G + 
Sbjct: 513 LKPNTVVYHSLIQGFCTHG--DLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVM 570

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            A +++FN ++H G   DIFT+N+L+D  C   +MD AF ++  M +    P+VVTYST+
Sbjct: 571 NA-QDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTL 629

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+GY K+GR+DD L +F EM    +    V+Y+ VL    + GR   A  +  EM  SG 
Sbjct: 630 INGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGT 689

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
                TY  +L G  +    DE   +F ++ A  +   +   +T+I    K    +EA  
Sbjct: 690 AMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHD 749

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +F     +GL  +   Y  +I  L K G VE A  +   M K G  P+    N II
Sbjct: 750 LFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDII 805



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 212/497 (42%), Gaps = 49/497 (9%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN-------LFNEMVH-----RGIDQD 333
           +FD++LR          N  LA  +R     A  +       LFN +       R +   
Sbjct: 105 LFDELLRQDTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRICREEAGPRVVPLT 164

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM-F 392
           + TY  L+D  C+  + DL     A +    +  + +  +T +     A R D+AL+M  
Sbjct: 165 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLL 224

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL-LVCKEMESSGIRKDAVTYNALLGGYGK 451
             M  LG   D  SYNTV+       R +EAL ++ +  +  G   D V+Y  ++ G   
Sbjct: 225 HRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFM 284

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           +G+  +   +F +M    V PN++TY++++    K     +A  + R+     ++ D V 
Sbjct: 285 EGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVT 344

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           Y+A+I      G  + A  +  EMT+EG+ P++VT+NS++D+  +   ++   +      
Sbjct: 345 YTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIA 404

Query: 572 GKQKE------SANLDAMCSQD---DKDVQEAGRTDNQIIK---VFGQLVAEKAGQGKKE 619
            K  +      S  L    ++    D +      TDN I+     F  L+   A +G  +
Sbjct: 405 TKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMD 464

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL---RLFDN 676
                     L +F +M    + PNVVT++ ++ A  R     DA   L ++    L  N
Sbjct: 465 EA--------LLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPN 516

Query: 677 QVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTAS---AFYNALTDMLWHFGQKRGA 732
            V  V H L+ G+      ++A  L  E  +MD         F++++   L + G+   A
Sbjct: 517 TV--VYHSLIQGFCTHGDLIKAKELVSE--MMDQGIPRPNITFFSSIIHSLCNEGRVMNA 572

Query: 733 Q----LVVLEGKRRQVW 745
           Q    LV+  G R  ++
Sbjct: 573 QDVFNLVIHIGDRPDIF 589



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 147/301 (48%), Gaps = 1/301 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++I  L   G+V  A+++F   ++ G    ++ F++LI  Y   G   +A  V ++M  
Sbjct: 557 SSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVS 616

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +P++VTY+ +I+   K G     ++ +F +ML   V+P  +T++ +L    R G   
Sbjct: 617 AGTEPDVVTYSTLINGYFKSGRIDDGLI-LFREMLCKRVKPTTVTYSLVLDGLFRAGRTS 675

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AA+ +F+EM+  G    I TY  +L  +C+    D A  +  ++ A N+   +   +TMI
Sbjct: 676 AAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMI 735

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
               K  R ++A ++F+ +   G+  +  +Y  ++    K G  EEA ++   ME +G  
Sbjct: 736 HALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCA 795

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             +   N ++    ++G+  +      ++    +S    T S LI +++  G Y+E ++ 
Sbjct: 796 PSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKF 855

Query: 497 F 497
            
Sbjct: 856 L 856


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 200/406 (49%), Gaps = 41/406 (10%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            +++I    R+GK   A  + E     G    V  ++ LIS Y +SG    A+ V +   
Sbjct: 152 CTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLD--- 208

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
           R N+ P++VTYN ++      G   K  +E+ D  L+    PD IT+  L+ A C   G+
Sbjct: 209 RMNVAPDVVTYNTILRTLCDSG-KLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGV 267

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA------------ 362
            +A + L +EM ++G   D+ TYN L++ ICK  ++D A + +  MP+            
Sbjct: 268 GQAMK-LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNI 326

Query: 363 -----------------------KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
                                  K  SP+VVT++ +I+   + G L  A+++  +M   G
Sbjct: 327 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 386

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
              + +SYN +L  + K  + + A+     M S G   D VTYN LL    K GK D   
Sbjct: 387 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 446

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +  Q+ +   SP L+TY+T+ID  SK G  + A+++  E ++ GLK D++ YS+L+  L
Sbjct: 447 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 506

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
            + G V+ A+    ++   GIRPN +TYNSI+    +S  T+  +D
Sbjct: 507 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAID 552



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 184/350 (52%), Gaps = 3/350 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A  + +  L +     V  ++ LI A  +     +A+ + + M+    KP++VTY
Sbjct: 230 GKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTY 289

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +I+  C +G +D    ++  ++M   G QP+ IT N +L      G W  A  L ++M
Sbjct: 290 NVLINGICKEGRLD--EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDM 347

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           + +G    + T+N L++ +C+   +  A +I+ +MP    +PN ++Y+ ++ G+ K  ++
Sbjct: 348 LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 407

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D A+     M   G   D V+YNT+L+   K G+ + A+ +  ++ S G     +TYN +
Sbjct: 408 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTV 467

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K GK +   ++ ++M+   + P+++TYS+L+   S+ G   EA++ F + +  G+
Sbjct: 468 IDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGI 527

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           + + + Y++++  LCK+   + A+  L  M  +  +P   TY  +I+   
Sbjct: 528 RPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIA 577



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 187/383 (48%), Gaps = 40/383 (10%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +LR L + G+  +A++     +++E   +      + +I    +   V  A  + + 
Sbjct: 219 YNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI--TYTILIEATCKESGVGQAMKLLDE 276

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
             N+G    V  ++ LI+   + G   EAI   N+M  Y  +PN++T+N ++ + C  G 
Sbjct: 277 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTG- 335

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM------------ 325
             +    ++  DMLR G  P  +TFN L+    R GL   A ++  +M            
Sbjct: 336 -RWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSY 394

Query: 326 -----------------------VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
                                  V RG   DI TYNTLL A+CK  ++D+A EI+ ++ +
Sbjct: 395 NPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSS 454

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
           K  SP ++TY+T+IDG +K G+ + A+ +  EM+  G+  D ++Y++++S  ++ G+ +E
Sbjct: 455 KGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE 514

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A+    ++E  GIR +A+TYN+++ G  K  + D        M +    P   TY+ LI+
Sbjct: 515 AIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIE 574

Query: 483 VYSKGGLYKEAMQIFREFKQAGL 505
             +  GL KEA+ +  E    GL
Sbjct: 575 GIAYEGLAKEALDLLNELCSRGL 597



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 93/399 (23%), Positives = 188/399 (47%), Gaps = 23/399 (5%)

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +  + M+  G  PD I   SL+    R G  + A  +   +   G   D+ TYN L+   
Sbjct: 135 KFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGY 194

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK  ++D A +++  M   N++P+VVTY+T++     +G+L  A+ +           D 
Sbjct: 195 CKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDV 251

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           ++Y  ++    K     +A+ +  EM + G + D VTYN L+ G  K+G+ DE  +    
Sbjct: 252 ITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 311

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M +    PN++T++ ++      G + +A ++  +  + G    VV ++ LI+ LC+ GL
Sbjct: 312 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGL 371

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESAN--- 579
           +  A+ +L++M   G  PN ++YN ++  F +    +  ++  D+    G   +      
Sbjct: 372 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 431

Query: 580 -LDAMCSQDDKDV------QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
            L A+C     DV      Q + +  + ++  +  ++   +  GK E          + +
Sbjct: 432 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTER--------AIKL 483

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             +M +  +KP+++T+S++++  SR    ++A     +L
Sbjct: 484 LDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 522



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 125/259 (48%), Gaps = 3/259 (1%)

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           R G  E        MV+RG   DI    +L+   C+  +   A  +M  +      P+V+
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TY+ +I GY K+G +D+AL +   M    +  D V+YNT+L      G+ ++A+ V    
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 242

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
                  D +TY  L+    K+    +  ++ ++M+     P+++TY+ LI+   K G  
Sbjct: 243 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 302

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            EA++        G + +V+ ++ ++ ++C  G    A  LL +M ++G  P+VVT+N +
Sbjct: 303 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 362

Query: 551 IDAFGRSATTECTVDDVER 569
           I+   R       +D +E+
Sbjct: 363 INFLCRQGLLGRAIDILEK 381



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 124/279 (44%), Gaps = 36/279 (12%)

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           + G+ ++  +  E M      P+++  ++LI  + + G  K+A  +    +Q+G   DV+
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y+ LI   CK+G +++A+ +LD M    + P+VVTYN+I+        T C       D
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTIL-------RTLC-------D 228

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
            GK K++  +       D+ +Q+    D     +  +   +++G G+            +
Sbjct: 229 SGKLKQAMEVL------DRQLQKECYPDVITYTILIEATCKESGVGQA-----------M 271

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYR 690
            +  +M     KP+VVT++ ++N   +    ++A   L  +  +  Q   + H +++   
Sbjct: 272 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 331

Query: 691 DNI--WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
            +   W+ A  L  ++     S +   +N L + L   G
Sbjct: 332 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQG 370


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 197/353 (55%), Gaps = 7/353 (1%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + +  +  G    +  + A+++   + G    A+S+   M++  ++ ++V YN +ID
Sbjct: 204 AVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 263

Query: 272 ACGKGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
               G   +KH+     +F+ M   G++PD  T+NSL++     G W  A  L + M+ R
Sbjct: 264 ----GLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIER 319

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            I+ ++ T++ L+DA  K  ++  A ++  EM  ++I P++ TYS++I+G+    RLD+A
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            +MF  M       + V+YNT++  + K  R EE + + +EM   G+  + VTYN L+ G
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             + G  D  +++F++M +D V P+++TYS L+D   K G  ++A+ +F   +++ ++ D
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +  Y+ +I+ +CK G VE    L   ++ +G++PNV+ Y ++I  F R    E
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 199/357 (55%), Gaps = 3/357 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+++ L + G +DLA ++ +          V  ++ +I    +  +  +A ++FN M+  
Sbjct: 225 AVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETK 284

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            ++P++ TYN++I   C  G   +     +  +M+   + P+ +TF++L+    + G   
Sbjct: 285 GIRPDVFTYNSLISCLCNYG--RWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLV 342

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L++EM+ R ID DIFTY++L++  C   ++D A  +   M +K+  PNVVTY+T+I
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+ KA R+++ + +F EM   G+  + V+YNT++    + G  + A  + K+M S G+ 
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +TY+ LL G  K GK ++   +FE ++   + P++ TY+ +I+   K G  ++   +
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           F      G+K +V++Y+ +I   C+ GL E A +L  EM ++G  P+   YN++I A
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA 579



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 250/537 (46%), Gaps = 54/537 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+   R  ++ LA  +    +  GY   +   S+L++ Y  S    +A+++ + M    
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 259 LKPNLVTYNAVIDACGKGGVDFKH-----VVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
            KP+ VT+N +I         F H      V + D M++ G QPD +T+ +++  +C RG
Sbjct: 181 YKPDTVTFNTLIHGL------FLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRG 234

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            + + A +L  +M    I+ D+  YNT++D +CK   +D AF +  +M  K I P+V TY
Sbjct: 235 DI-DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTY 293

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +++I      GR  DA  + S M    I  + V+++ ++  + K G+  EA  +  EM  
Sbjct: 294 NSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             I  D  TY++L+ G+    + DE + MFE M +    PN++TY+TLI  + K    +E
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            M++FRE  Q GL  + V Y+ LI  L + G  + A  +  +M  +G+ P+++TY+ ++D
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
              +    E  +   E  L K K   +                      I  +  ++   
Sbjct: 474 GLCKYGKLEKALVVFEY-LQKSKMEPD----------------------IYTYNIMIEGM 510

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              GK E+    ++ C L +        +KPNV+ ++ +++   R    E+A  L  E++
Sbjct: 511 CKAGKVED--GWDLFCSLSL------KGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562

Query: 673 ----LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVK----LMDSSTASAFYNALTD 721
               L D+  Y     +    RD     +  L  E++    + D+ST S   N L D
Sbjct: 563 EDGTLPDSGCYNTL--IRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 617



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 201/372 (54%), Gaps = 9/372 (2%)

Query: 188 RKNDQGKLASAMI---SILGRLGK---VDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
           +K ++GK+ + ++   +I+  L K   +D A  +F     +G    V+ +++LIS     
Sbjct: 244 KKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNY 303

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
           G   +A  + ++M    + PN+VT++A+IDA  K G       +++D+M++  + PD  T
Sbjct: 304 GRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEG-KLVEAEKLYDEMIKRSIDPDIFT 362

Query: 302 FNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           ++SL+   C    L EA +++F  M+ +    ++ TYNTL+   CK  +++   E+  EM
Sbjct: 363 YSSLINGFCMHDRLDEA-KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
             + +  N VTY+T+I G  +AG  D A  +F +M   G+  D ++Y+ +L    K G+ 
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           E+AL+V + ++ S +  D  TYN ++ G  K GK ++   +F  +    V PN++ Y+T+
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I  + + GL +EA  +FRE K+ G   D   Y+ LI A  ++G   ++  L+ EM   G 
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGF 601

Query: 541 RPNVVTYNSIID 552
             +  T + +I+
Sbjct: 602 VGDASTISMVIN 613



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 207/429 (48%), Gaps = 41/429 (9%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           + +F +M+++   P  + FN LL+  ++   ++   +L   M +  I  D+++YN L++ 
Sbjct: 65  IGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINC 124

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C+ +Q+ LA  ++ +M      P++VT S++++GY  + R+ DA+ +  +M  +G   D
Sbjct: 125 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 184

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V++NT++       +  EA+ +  +M   G + D VTY A++ G  K+G  D    + +
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLK 244

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M+   +  +++ Y+T+ID   K     +A  +F + +  G++ DV  Y++LI  LC  G
Sbjct: 245 KMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYG 304

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDD-VERDLGKQ--KES 577
               A  LL  M +  I PNVVT++++IDAF   G+    E   D+ ++R +       S
Sbjct: 305 RWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364

Query: 578 ANLDAMCSQD-------------DKDVQEAGRTDNQIIKVFG---------QLVAEKAGQ 615
           + ++  C  D              KD      T N +IK F          +L  E + +
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424

Query: 616 GKKENRCRQEILCILGVFQ------------KMHKLKIKPNVVTFSAILNACSRCNSFED 663
           G   N      L I G+FQ            KM    + P+++T+S +L+   +    E 
Sbjct: 425 GLVGNTVTYNTL-IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483

Query: 664 ASMLLEELR 672
           A ++ E L+
Sbjct: 484 ALVVFEYLQ 492



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 171/338 (50%), Gaps = 5/338 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++IS L   G+   A  +    +       V  FSALI A+ + G   EA  +++ M +
Sbjct: 294 NSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVD-FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
            ++ P++ TY+++I+  C    +D  KH+ E+   M+     P+ +T+N+L+    +   
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL---MISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E    LF EM  RG+  +  TYNTL+  + +    D+A +I  +M +  + P+++TYS 
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++DG  K G+L+ AL +F  ++   +  D  +YN ++    K G+ E+   +   +   G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++ + + Y  ++ G+ ++G  +E   +F +MK D   P+   Y+TLI    + G    + 
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASA 590

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           ++ +E +  G   D    S +I+ L    L +S + +L
Sbjct: 591 ELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 181/358 (50%), Gaps = 11/358 (3%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +  K E K    D +T+  L+  L N G WS A +  +  ++R  + N      SA+I  
Sbjct: 277 LFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIER--KINPNVVTFSALIDA 334

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
             + GK+  A+ +++  +       ++ +S+LI+ +       EA  +F  M   +  PN
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394

Query: 263 LVTYNAVIDACGKGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           +VTYN +I    KG    K V   +E+F +M + G+  + +T+N+L+    + G  + A+
Sbjct: 395 VVTYNTLI----KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            +F +MV  G+  DI TY+ LLD +CK  +++ A  +   +    + P++ TY+ MI+G 
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            KAG+++D  ++F  +   G+  + + Y T++S + + G  EEA  + +EM+  G   D+
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 570

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
             YN L+    + G       + ++M++     +  T S +I++   G L K  +++ 
Sbjct: 571 GCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 163/368 (44%), Gaps = 51/368 (13%)

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           RG  + AA   + E + R         N LL+      ++D A  +  EM      P++V
Sbjct: 36  RGVYFSAASYDYREKLSR---------NALLNL-----KLDDAIGLFGEMVQSRPLPSIV 81

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
            ++ ++   AK  + D  +++   M+ L I  D  SYN +++ + +  +   AL V  +M
Sbjct: 82  EFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKM 141

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
              G   D VT ++LL GY    +  +   + +QM      P+ +T++TLI         
Sbjct: 142 MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKA 201

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            EA+ +  +  Q G + D+V Y A+++ LCK G ++ A+SLL +M K  I  +VV YN+I
Sbjct: 202 SEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 261

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
           ID   +       +DD      K +                 +  R D   +  +  L++
Sbjct: 262 IDGLCKYK----HIDDAFALFNKME----------------TKGIRPD---VFTYNSLIS 298

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                G+  +  R        +   M + KI PNVVTFSA+++A      F     L+E 
Sbjct: 299 CLCNYGRWSDASR--------LLSNMIERKINPNVVTFSALIDA------FVKEGKLVEA 344

Query: 671 LRLFDNQV 678
            +L+D  +
Sbjct: 345 EKLYDEMI 352


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 251/517 (48%), Gaps = 12/517 (2%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           L   L + G   +A QCF+  +KR  R   + +  + ++    +LGK D  K  F+  + 
Sbjct: 69  LFSVLIDLGMLEEATQCFS-KMKRF-RVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIG 126

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
            G   TV+ ++ +I    + G  + A  +F  MK   L P+ VTYN++ID  GK G    
Sbjct: 127 AGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVG-RLD 185

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             V  F++M     +PD IT+NSL+    + G        + EM   G+  ++ +Y+TL+
Sbjct: 186 DTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLV 245

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           DA CK   M  A +   +M      PN  TY++++D   K G L DA  + +EM  +G+ 
Sbjct: 246 DAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVE 305

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + V+Y  ++       R +EA  +  +M ++G+  +  +YNAL+ G+ K    D    +
Sbjct: 306 WNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALEL 365

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYK--EAMQIFREFKQAGLKADVVLYSALIDAL 519
             ++K   + P+LL Y T I  +   GL K   A  +  E ++ G+KA+ ++Y+ L+DA 
Sbjct: 366 LNELKGRGIQPDLLLYGTFI--WGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAY 423

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER---DLGKQKE 576
            K+G     + LL+EM +      VVT+  +ID   ++      +D   R   D G Q  
Sbjct: 424 FKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPN 483

Query: 577 SANLDAMCSQDDKDVQ-EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQ 634
           +A   AM     K+ Q +A  T  + +   G +    A     +   +Q  +L  L +  
Sbjct: 484 AAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRD 543

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           KM ++ +K +++ +++++   S+CN  + A   LEE+
Sbjct: 544 KMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEM 580



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 203/415 (48%), Gaps = 39/415 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI   G++G++D     FE   +      V  +++LI+ + +SG   + +  +  MK+
Sbjct: 172 NSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQ 231

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             LKPN+V+Y+ ++DA  K  +  +  ++ + DM R G  P+  T+ SL+ A C  G L 
Sbjct: 232 SGLKPNVVSYSTLVDAFCKEDM-MQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLS 290

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +A R L NEM+  G++ ++ TY  L+D +C   +M  A ++  +M    + PN+ +Y+ +
Sbjct: 291 DAFR-LANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNAL 349

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G+ KA  +D AL + +E+K  GI  D + Y T +     L + E A +V  EM+ +GI
Sbjct: 350 IHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGI 409

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMK---------ADCV---------------- 470
           + + + Y  L+  Y K G   E   + E+M+           CV                
Sbjct: 410 KANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAID 469

Query: 471 -----------SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
                       PN   Y+ +ID   K    K A  +F +  Q GL  D   Y++L+D  
Sbjct: 470 YFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGN 529

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
            K G +  A++L D+M + G++ +++ Y S++  F +    +     +E  +G++
Sbjct: 530 LKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEE 584



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 221/469 (47%), Gaps = 33/469 (7%)

Query: 285 EIFDDM--LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           ++FD++   RN   P    F++L +V    G+ E A   F++M    +     + N LL 
Sbjct: 47  DVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLH 106

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
              K  + D       +M      P V TY+ MID   K G ++ A  +F EMKF G+  
Sbjct: 107 KFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIP 166

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D V+YN+++  Y K+GR ++ +   +EM+S     D +TYN+L+  + K GK  +    +
Sbjct: 167 DTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFY 226

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +MK   + PN+++YSTL+D + K  + ++A++ + + ++ G   +   Y++L+DA CK 
Sbjct: 227 REMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKI 286

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           G +  A  L +EM + G+  NVVTY ++ID    +      + + E+  GK   +  +  
Sbjct: 287 GNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAE----RMKEAEKLFGKMVTAGVIPN 342

Query: 583 MCSQD--------DKDVQEA--------GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
           + S +         K++  A        GR     + ++G  +    G  K E       
Sbjct: 343 LASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIE------- 395

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
                V  +M +  IK N + ++ +++A  +  +  +   LLEE++  D++V  V   +L
Sbjct: 396 -AAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVL 454

Query: 687 MG--YRDNIWVQALSLFDEV-KLMDSSTASAFYNALTDMLWHFGQKRGA 732
           +    ++ +  +A+  F  +         +A Y A+ D L    Q + A
Sbjct: 455 IDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAA 503



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 154/343 (44%), Gaps = 4/343 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++    ++G +  A  +    L  G    V  ++ALI     +   +EA  +F  M  
Sbjct: 277 TSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVT 336

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             + PNL +YNA+I    K   +    +E+ +++   G+QPD + + + +  +C    + 
Sbjct: 337 AGVIPNLASYNALIHGFVKAK-NMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKI- 394

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EAA+ + NEM   GI  +   Y TL+DA  K         ++ EM   +    VVT+  +
Sbjct: 395 EAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVL 454

Query: 376 IDGYAKAGRLDDALNMFSEMKF-LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           IDG  K   +  A++ F  M    G+  +   Y  ++    K  + + A  + ++M   G
Sbjct: 455 IDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEG 514

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  D   Y +L+ G  KQG   E   + ++M    +  +LL Y++L+  +S+    ++A 
Sbjct: 515 LVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKAR 574

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
               E     +  D VL   ++    + G ++ AV L   + K
Sbjct: 575 SFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMK 617


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 242/493 (49%), Gaps = 24/493 (4%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           +V  A +IFE  L +G   T   ++ LI      G  ++A  +   M+ + L P+   +N
Sbjct: 297 EVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFN 356

Query: 268 AVIDACGKGGVD---FKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFN 323
            VI    KG ++   +K  V +F +M  +G+ PD  T+N L+  +C R  + EA  NL+ 
Sbjct: 357 MVI----KGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREAL-NLWE 410

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           +M   G+   I TY++LL   C    MD A ++  EMP K  +PNVVTY+T++ G+    
Sbjct: 411 KMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKA 470

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
             D A  + +EMK  G+  +  +YNT+++    +GR  E   + K  E+ G    A+TYN
Sbjct: 471 AFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYN 530

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           +++ G+ K G       +++QM A  + PN++TY++ ID Y K      A+++  + +  
Sbjct: 531 SIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCK 590

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           GL+ D+  Y++LI   C+ G +  A+ +L  M K+G+ PN+  YNS I  +      E  
Sbjct: 591 GLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEA 650

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
           +   E+ +   KE  +LD        D           +K++ ++VA+            
Sbjct: 651 LRFYEKMI---KEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTAL 707

Query: 624 QEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML----LEELR 672
              LC  G       +  +M++L I+PNV+ ++ ++N   R    ++A  L    LE   
Sbjct: 708 THGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKI 767

Query: 673 LFDNQVYGVAHGL 685
           + D+  Y +  G+
Sbjct: 768 MPDDTTYDILVGM 780



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 173/346 (50%), Gaps = 3/346 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +D A  ++     +G+   V  ++ L+  +       +A ++   MK+  +  N  TY
Sbjct: 435 GCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTY 494

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +I+  C  G V    V E+       G  P  +T+NS++    + G+  +A  ++ +M
Sbjct: 495 NTLINGLCVVGRV--CEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             +GI  +I TY + +D  CK +  DLA +++ ++  K + P++  Y+++I G+ + G +
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNM 612

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             AL +   M   G+  +   YN+ ++ Y  L   EEAL   ++M   GI  D  TY  L
Sbjct: 613 SHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTL 672

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G+ K G      +++ +M A    P+ +T++ L     + G   +A ++  E  +  +
Sbjct: 673 IDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDI 732

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           + +V++Y+ LI+   +NG ++ A  L DEM +  I P+  TY+ ++
Sbjct: 733 RPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 198/451 (43%), Gaps = 33/451 (7%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           +G+    + F  ++ A  + G   +A+ +F+ M    ++P+    +  I +  K   D  
Sbjct: 171 KGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR-DAN 229

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             + +   M   G  P   TFNS++ V  +GG  E A ++ +E++  G    +    TL+
Sbjct: 230 RALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLM 289

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
              C   ++  A +I  E     + P  VTY+ +I G  + G  + A  +  +M+  G+ 
Sbjct: 290 HGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLL 349

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
                +N V+        +++A+ + KEM  SGI  DA TYN L+    ++ K  E   +
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           +E+M    V P ++TY +L+  Y   G   EA++++ E    G   +VV Y+ L+     
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
               + A +LL EM + G+  N  TYN++I+         C V  V  ++G+  +    +
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDYTYNTLINGL-------CVVGRV-CEVGEMLKRFETE 520

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
                          T N II  F      KAG                 V+Q+M    I
Sbjct: 521 GFVP--------TAMTYNSIINGF-----IKAGMMGSA----------FAVYQQMCAKGI 557

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            PN+VT+++ ++   + +  + A  +L ++R
Sbjct: 558 PPNIVTYTSFIDGYCKTSCCDLALKMLNDVR 588



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 161/333 (48%), Gaps = 11/333 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQ--GKLASAMISILGRLGKVDLAKNIF 216
           YT L++   N+  + KA    A   +     ND     L + +  ++GR+ +V      F
Sbjct: 459 YTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGL-CVVGRVCEVGEMLKRF 517

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
           ET   EG+  T   ++++I+ + ++G    A +V+  M    + PN+VTY + ID  C  
Sbjct: 518 ET---EGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKT 574

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDI 334
              D    +++ +D+   G++PD   +NSL+   C  G +  A + L   M+  G+  +I
Sbjct: 575 SCCDL--ALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLV-LMLKDGLLPNI 631

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
             YN+ +        M+ A     +M  + I  +  TY+T+IDG++K G +  AL ++SE
Sbjct: 632 SVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSE 691

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G   D +++  +     + G  ++A  +  EM    IR + + YN L+ GY + GK
Sbjct: 692 MVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGK 751

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
             E  R+ ++M    + P+  TY  L+ + S G
Sbjct: 752 LQEAFRLHDEMLERKIMPDDTTYDILVGMKSLG 784



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 125/258 (48%), Gaps = 1/258 (0%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           GV PD  +   LLAV +R      A  L  EM  +G   D + ++ ++ A  K    D A
Sbjct: 137 GVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGMYDDA 196

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             +  EMPA  I P+    S  I    K    + AL +  +M+  G      ++N+V+ +
Sbjct: 197 VRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDV 256

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
             K GR EEAL +  E+ ++G +   V    L+ GY  Q +  +   +FE+   D + P 
Sbjct: 257 LVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPT 316

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +TY+ LI   ++ G+ ++A ++ R+ +  GL      ++ +I  L  + L + AVSL  
Sbjct: 317 DVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFK 376

Query: 534 EMTKEGIRPNVVTYNSII 551
           EM   GI P+  TYN +I
Sbjct: 377 EMADSGI-PDAFTYNILI 393



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 90/383 (23%), Positives = 162/383 (42%), Gaps = 58/383 (15%)

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M+  G+  D  S   +L++ A+     +AL +  EM   G   DA  ++ ++    K+G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 455 YDEVRRMFEQMKADCVSPNL-----------------------------------LTYST 479
           YD+  R+F++M A  + P+                                     T+++
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           ++DV  KGG  +EA+ I  E    G K  VVL + L+   C    V  A+ + +E  ++G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           + P  VTY  +I        TE  + +   +L +Q     L  + S ++ ++   G  ++
Sbjct: 313 LVPTDVTYTVLI-----RGCTEEGMPEKAYELCRQMRDHGL--LPSTNEFNMVIKGLLND 365

Query: 600 QIIKVFGQLVAEKAGQGKKEN---------RC-RQEILCILGVFQKMHKLKIKPNVVTFS 649
           ++ K    L  E A  G  +           C R++I   L +++KM++  +KP +VT+ 
Sbjct: 366 KLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYH 425

Query: 650 AILNACSRCNSFEDASMLLEEL--RLFDNQVYGVAHGLLMGYRDN--IWVQALSLFDEVK 705
           ++L         ++A  L  E+  + F   V  V +  LM    N   + +A +L  E+K
Sbjct: 426 SLLLCYCVNGCMDEAVKLYTEMPGKGFTPNV--VTYTTLMKGHINKAAFDKAYALLAEMK 483

Query: 706 LMDSSTASAFYNALTDMLWHFGQ 728
               S     YN L + L   G+
Sbjct: 484 QNGVSCNDYTYNTLINGLCVVGR 506



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 33/287 (11%)

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M+A  V+P+  + + L+ V ++     +A+ +  E +  G   D  ++  ++ A  K G+
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFG--RSATTECTVDDVERDLGKQKESANLDA 582
            + AV L DEM    I P+    +  I +    R A     V    +D G        ++
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK----------ENRCRQ-EILCILG 631
           +      DV   G    + + +  +L+A     GKK             C Q E+   L 
Sbjct: 253 VV-----DVLVKGGRMEEALHIKDELLA----TGKKMSVVLATTLMHGYCLQREVRKALD 303

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR-----LFDNQVYGVAHGLL 686
           +F++  +  + P  VT++ ++  C+     E A  L  ++R        N+   V  GLL
Sbjct: 304 IFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLL 363

Query: 687 MGYRDNIWVQALSLFDEVKLMDSSTASAF-YNALTDMLWHFGQKRGA 732
               D +W  A+SLF E  + DS    AF YN L   L    + R A
Sbjct: 364 ---NDKLWKDAVSLFKE--MADSGIPDAFTYNILIHWLCQRRKIREA 405


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 156/566 (27%), Positives = 252/566 (44%), Gaps = 44/566 (7%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R  +++ AK  FE     G      A SALI  + R G   E + + + M    +  N
Sbjct: 219 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPIN 278

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           L+TYN +I    K G   +   EI   M+  G +P+  TF  L+    R      A  L 
Sbjct: 279 LITYNVLIHGLCKFG-KMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 337

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           +EM  R +     +Y  +++ +C    + LA +++ +M    + PNVV YST+I GYA  
Sbjct: 338 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASE 397

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           GR+++A  +   M   G+  D   YN ++S  +K G+ EEA     E++  G++ DAVT+
Sbjct: 398 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 457

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
            A + GY K GK  E  + F++M    + PN   Y+ LI+ + K G   EA+ IFR    
Sbjct: 458 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHA 517

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
            G+  DV   SA I  L KNG V+ A+ +  E+ ++G+ P+V TY+S+I  F       C
Sbjct: 518 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF-------C 570

Query: 563 TVDDVERDLGKQKE-------------SANLDAMCSQDD--------KDVQEAGRTDNQI 601
              +VE+      E             +A +D +C   D          + E G   + +
Sbjct: 571 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 630

Query: 602 IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
              +  ++    G  K EN           +F +M    ++P+   ++A+++ C +    
Sbjct: 631 --TYSTMI---DGYCKSENVAEA-----FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 680

Query: 662 EDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALS-LFDEVKLMDSSTASAFYNALT 720
           E A  L  E+           + L+ GY  +  +Q  S LF E+           Y  + 
Sbjct: 681 EKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 740

Query: 721 DMLWHF--GQKRGAQLVVLEGKRRQV 744
           D  WH   G+   A L+  E + R +
Sbjct: 741 D--WHCKAGKMEEANLLFKEMQERNL 764



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 196/360 (54%), Gaps = 4/360 (1%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            SA I  L + G+V  A  +F     +G    V+ +S+LIS + + G  ++A  + + M 
Sbjct: 527 CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMC 586

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
              + PN+  YNA++D   K G D +   ++FD M   G++PD +T+++++   C    +
Sbjct: 587 LKGIAPNIFIYNALVDGLCKSG-DIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENV 645

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA  +LF+EM  +G+    F YN L+   CK   M+ A  +  EM  K  +   ++++T
Sbjct: 646 AEAF-SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNT 703

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDGY K+ ++ +A  +F EM    I  D V+Y TV+  + K G+ EEA L+ KEM+   
Sbjct: 704 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERN 763

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  D VTY +L+ GY K G+  EV  +FE+M A  V P+ +TY  +I  + K     EA 
Sbjct: 764 LIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAF 823

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++  E    G+     ++  LI ALCK   +  A  LLDEM + G++P++   ++++ +F
Sbjct: 824 KLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSF 883



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 247/497 (49%), Gaps = 50/497 (10%)

Query: 202 ILG--RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           ILG  + GK+  A   F+  L+ G       ++ LI+ + ++G   EA+S+F  +    +
Sbjct: 461 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 520

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            P++ T +A I    K G   +  +++F ++   G+ PD  T++SL++   + G  E A 
Sbjct: 521 LPDVQTCSAFIHGLLKNG-RVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 579

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            L +EM  +GI  +IF YN L+D +CK   +  A ++   MP K + P+ VTYSTMIDGY
Sbjct: 580 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 639

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K+  + +A ++F EM   G+      YN ++    K G  E+A+ + +EM   G     
Sbjct: 640 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATT 698

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           +++N L+ GY K  K  E  ++F++M A  + P+ +TY+T+ID + K G  +EA  +F+E
Sbjct: 699 LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 758

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY----------NS 549
            ++  L  D V Y++L+    K G      +L ++M  +G++P+ VTY          ++
Sbjct: 759 MQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDN 818

Query: 550 IIDAF-------GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI- 601
           +++AF       G+   T+ T+ D+            + A+C ++D  + EA +  +++ 
Sbjct: 819 LVEAFKLRDEVVGKGMLTKGTIHDLL-----------ITALCKRED--LTEASKLLDEMG 865

Query: 602 -------IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
                  +     LV      GK +   R        VF+ +  L + P+  T   ++N 
Sbjct: 866 ELGLKPSLAACSTLVRSFHEAGKMDEATR--------VFEGVKSLGLVPDTTTLIDLVNG 917

Query: 655 CSRCNSFEDASMLLEEL 671
                  EDA  L+++L
Sbjct: 918 NLNDTDSEDARNLIKQL 934



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 234/486 (48%), Gaps = 18/486 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+IS L + GK++ A          G       F A I  Y ++G   EA   F+ M  
Sbjct: 423 NAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLD 482

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           + L PN   Y  +I+   K G +    + IF  +   GV PD  T ++ +    + G  +
Sbjct: 483 HGLMPNNPLYTVLINGHFKAG-NLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ 541

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +F+E+  +G+  D+FTY++L+   CK  +++ AFE+  EM  K I+PN+  Y+ ++
Sbjct: 542 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 601

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  K+G +  A  +F  M   G+  D V+Y+T++  Y K     EA  +  EM S G++
Sbjct: 602 DGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ 661

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             +  YNAL+ G  K+G  ++   +F +M     +  L +++TLID Y K    +EA Q+
Sbjct: 662 PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQL 720

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F+E     +  D V Y+ +ID  CK G +E A  L  EM +  +  + VTY S++  + +
Sbjct: 721 FQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNK 780

Query: 557 SATTECTVDDVERDLGKQKESANLD------AMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
              +       E+ + K  +   +       A C +D  ++ EA +  ++++   G L  
Sbjct: 781 LGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKED--NLVEAFKLRDEVVGK-GMLTK 837

Query: 611 EKAGQGKKENRCRQEILCILG-VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
                      C++E L     +  +M +L +KP++   S ++       SF +A  + E
Sbjct: 838 GTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLV------RSFHEAGKMDE 891

Query: 670 ELRLFD 675
             R+F+
Sbjct: 892 ATRVFE 897



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 239/524 (45%), Gaps = 30/524 (5%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           AMI+ L     + LA  + E     G    V  +S LI  Y   G  +EA  + + M   
Sbjct: 354 AMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCS 413

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            + P++  YNA+I    K G   +       ++   G++PD +TF + +   S+ G    
Sbjct: 414 GVAPDIFCYNAIISCLSKAG-KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 472

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A   F+EM+  G+  +   Y  L++   K   +  A  I   + A  + P+V T S  I 
Sbjct: 473 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIH 532

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K GR+ +AL +FSE+K  G+  D  +Y++++S + K G  E+A  +  EM   GI  
Sbjct: 533 GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 592

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +   YNAL+ G  K G     R++F+ M    + P+ +TYST+ID Y K     EA  +F
Sbjct: 593 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 652

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E    G++    +Y+AL+   CK G +E A++L  EM ++G     +++N++ID + +S
Sbjct: 653 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKS 711

Query: 558 ATTECTVDDVERDLGKQ------KESANLDAMCSQDD--------KDVQEAGRTDNQIIK 603
              +      +  + KQ        +  +D  C            K++QE     + +  
Sbjct: 712 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 771

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
                   K GQ  +          +  +F+KM    +KP+ VT+  ++ A  + ++  +
Sbjct: 772 TSLMYGYNKLGQSSE----------VFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVE 821

Query: 664 ASMLLEELRLFDNQVYGVAHGLL---MGYRDNIWVQALSLFDEV 704
           A  L +E+        G  H LL   +  R+++  +A  L DE+
Sbjct: 822 AFKLRDEVVGKGMLTKGTIHDLLITALCKREDL-TEASKLLDEM 864



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 191/361 (52%), Gaps = 10/361 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++IS   + G+V+ A  + +    +G    ++ ++AL+    +SG  Q A  +F+ M  
Sbjct: 563 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 622

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L+P+ VTY+ +ID   K   +      +F +M   GVQP    +N+L+  C + G  E
Sbjct: 623 KGLEPDSVTYSTMIDGYCKSE-NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDME 681

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A NLF EM+ +G    + ++NTL+D  CK  ++  A ++  EM AK I P+ VTY+T+I
Sbjct: 682 KAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 740

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D + KAG++++A  +F EM+   + +D V+Y +++  Y KLG+  E   + ++M + G++
Sbjct: 741 DWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVK 800

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST----LIDVYSKGGLYKE 492
            D VTY  ++  + K+   D +   F +++ + V   +LT  T    LI    K     E
Sbjct: 801 PDEVTYGLVIYAHCKE---DNLVEAF-KLRDEVVGKGMLTKGTIHDLLITALCKREDLTE 856

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A ++  E  + GLK  +   S L+ +  + G ++ A  + + +   G+ P+  T   +++
Sbjct: 857 ASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 916

Query: 553 A 553
            
Sbjct: 917 G 917



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 169/343 (49%), Gaps = 4/343 (1%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + +A++  L + G +  A+ +F+    +G       +S +I  Y +S    EA S+F+ M
Sbjct: 596 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 655

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGG 313
               ++P+   YNA++  C K G D +  + +F +ML+ G     ++FN+L+   C    
Sbjct: 656 PSKGVQPHSFVYNALVHGCCKEG-DMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCK 713

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           + EA++ LF EM+ + I  D  TY T++D  CK  +M+ A  +  EM  +N+  + VTY+
Sbjct: 714 IQEASQ-LFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 772

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           +++ GY K G+  +   +F +M   G+  D V+Y  V+  + K     EA  +  E+   
Sbjct: 773 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 832

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G+      ++ L+    K+    E  ++ ++M    + P+L   STL+  + + G   EA
Sbjct: 833 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEA 892

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
            ++F   K  GL  D      L++    +   E A +L+ ++ 
Sbjct: 893 TRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 217/514 (42%), Gaps = 57/514 (11%)

Query: 225 GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVV 284
           G++   F  LI +Y R G   EA +VF   K  ++  +L+  N++               
Sbjct: 153 GSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSL--------------- 197

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
                M   G+ P+  T+  + A   R      A+  F EM   G+  D    + L+D  
Sbjct: 198 ---RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGF 254

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
            +   +D    I   M +  I  N++TY+ +I G  K G+++ A  +   M  LG   + 
Sbjct: 255 MREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNS 314

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            ++  ++  Y +      AL +  EME   +   AV+Y A++ G           ++ E+
Sbjct: 315 RTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 374

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    + PN++ YSTLI  Y+  G  +EA ++      +G+  D+  Y+A+I  L K G 
Sbjct: 375 MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 434

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           +E A + L E+   G++P+ VT+ + I  + ++              GK  E+A      
Sbjct: 435 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKT--------------GKMTEAAKY---- 476

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
              D+ +      +N +  V         G  K  N     ++  L +F+ +H L + P+
Sbjct: 477 --FDEMLDHGLMPNNPLYTVLIN------GHFKAGN-----LMEALSIFRHLHALGVLPD 523

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWVQ-ALS 699
           V T SA ++   +    ++A  +  EL+    + D   Y     L+ G+     V+ A  
Sbjct: 524 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS---SLISGFCKQGEVEKAFE 580

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           L DE+ L   +     YNAL D L   G  + A+
Sbjct: 581 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 614



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 210/482 (43%), Gaps = 69/482 (14%)

Query: 286 IFDDML---RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           I D +L   RN      + F+ L+    R G+ + A N+F    +  I   +   N+L  
Sbjct: 140 ILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSL-- 197

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
                            M  K + PN  TY+ +  G  +A R+++A   F EM+  G+  
Sbjct: 198 ---------------RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKP 242

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D  + + ++  + + G  +E L +   M S GI  + +TYN L+ G  K GK ++   + 
Sbjct: 243 DYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEIL 302

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           + M      PN  T+  LI+ Y +      A+++  E ++  L    V Y A+I+ LC  
Sbjct: 303 KGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHC 362

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
             +  A  LL++MT  G++PNVV Y+++I  +     +E  +++  R          LD 
Sbjct: 363 KDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYA----SEGRIEEARR---------LLDG 409

Query: 583 M-CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
           M CS    D+       N II         KAG+ ++ +    EI              +
Sbjct: 410 MSCSGVAPDI----FCYNAIISCLS-----KAGKMEEASTYLLEI----------QGRGL 450

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVYGVAHGLLMG-YRDNIWVQ 696
           KP+ VTF A +   S+     +A+   +E+     + +N +Y V   L+ G ++    ++
Sbjct: 451 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV---LINGHFKAGNLME 507

Query: 697 ALSLFDEVK----LMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES 752
           ALS+F  +     L D  T SAF +     L   G+ + A  V  E K + +  +V++ S
Sbjct: 508 ALSIFRHLHALGVLPDVQTCSAFIHG----LLKNGRVQEALKVFSELKEKGLVPDVFTYS 563

Query: 753 CL 754
            L
Sbjct: 564 SL 565


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 186/332 (56%), Gaps = 3/332 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           +  ++ LI+AY R G  +EA  + NS     ++P L+TYNA++    K G  +    ++ 
Sbjct: 292 IVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIG-KYDRAKDVL 350

Query: 288 DDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
            +ML+ G+ P+  T+N+LL  +C R  + EA + +F+EM  RG+  D+ ++++L+  + +
Sbjct: 351 IEMLQLGLTPNAATYNTLLVEICRRDNILEA-QEIFDEMSRRGVLPDLVSFSSLIGVLAR 409

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +  A     EM    I P+ V Y+ +IDG+ + G L DAL M  EM   G  +D V+
Sbjct: 410 NGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVT 469

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNT L+   K   F +A ++  EM   G+  D  T+  L+ GY K G  D+   +FE M 
Sbjct: 470 YNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMV 529

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + P+ +TY+TLID + K G    A +++ +  +  +  D + Y  +++  C +GL+ 
Sbjct: 530 RTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLP 589

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            A++L D+M ++GIRPN+VT N++I  + RS 
Sbjct: 590 EALNLCDQMLEKGIRPNLVTCNTLIKGYCRSG 621



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 186/342 (54%), Gaps = 1/342 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ IF+     G    + +FS+LI    R+G+  +A+  F  M+R  + P+ V Y  +ID
Sbjct: 381 AQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILID 440

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              + G      +++ D+ML  G   D +T+N+ L    +  ++  A  LFNEMV RG+ 
Sbjct: 441 GFCRNGA-LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMV 499

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D +T+ TL+   CK   MD A  +   M   N+ P+ VTY+T+IDG+ KAG +  A  +
Sbjct: 500 PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKEL 559

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           + +M    I  D +SY TVL+ +   G   EAL +C +M   GIR + VT N L+ GY +
Sbjct: 560 WDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCR 619

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G   +      +M ++ + P+  +Y+TLID Y K    ++A  +  E ++ GL+ +++ 
Sbjct: 620 SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT 679

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           Y+ +++  C  G ++ A  +L +M + GI P+  TY+S+I+ 
Sbjct: 680 YNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 211/417 (50%), Gaps = 17/417 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A++  L ++GK D AK++    L  G       ++ L+    R     EA  +F+ M R
Sbjct: 331 NAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSR 390

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P+LV+++++I    + G  ++ ++  F +M R+G+ PD + +  L+    R G   
Sbjct: 391 RGVLPDLVSFSSLIGVLARNGHLYQALMH-FREMERSGIVPDNVIYTILIDGFCRNGALS 449

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  + +EM+ RG   D+ TYNT L+ +CK      A  +  EM  + + P+  T++T+I
Sbjct: 450 DALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLI 509

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            GY K G +D ALN+F  M    +  D+V+YNT++  + K G    A  +  +M    I 
Sbjct: 510 RGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDII 569

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D ++Y  +L G+   G   E   + +QM    + PNL+T +TLI  Y + G   +A + 
Sbjct: 570 PDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEY 629

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             +    G+  D   Y+ LID   K   +E A  L++EM K G++ N++TYN I++ F  
Sbjct: 630 LSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF-- 687

Query: 557 SATTECTVDDVERDLGKQKE----------SANLDAMCSQDDKDVQEAGRTDNQIIK 603
               E  + + E+ L K  E          S+ ++   SQD  +++EA R  +++++
Sbjct: 688 --CAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQD--NMKEAFRFHDEMLQ 740



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 187/343 (54%), Gaps = 1/343 (0%)

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
           F+    +G   ++ A + L+    R+G+   A  ++  + R  ++ N+ T N +++A  K
Sbjct: 210 FQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCK 269

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
               F++V+    DM   GV  D +T+N+L+    R GL E A  L N    RG++  + 
Sbjct: 270 DR-KFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLL 328

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYN +L  +CK  + D A +++ EM    ++PN  TY+T++    +   + +A  +F EM
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM 388

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G+  D VS+++++ + A+ G   +AL+  +EME SGI  D V Y  L+ G+ + G  
Sbjct: 389 SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGAL 448

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            +  +M ++M A     +++TY+T ++   K  ++ +A  +F E  + G+  D   ++ L
Sbjct: 449 SDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTL 508

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           I   CK+G ++ A++L + M +  ++P+ VTYN++ID F ++ 
Sbjct: 509 IRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAG 551



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 193/387 (49%), Gaps = 31/387 (8%)

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           E F  + R GV       N LL    R G  + A  ++ E+V  GI+ +++T N +++A+
Sbjct: 208 EAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNAL 267

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK  + +     +++M  K +  ++VTY+T+I+ Y + G +++A  + +     G+    
Sbjct: 268 CKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGL 327

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           ++YN +L    K+G+++ A  V  EM   G+  +A TYN LL    ++    E + +F++
Sbjct: 328 LTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDE 387

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    V P+L+++S+LI V ++ G   +A+  FRE +++G+  D V+Y+ LID  C+NG 
Sbjct: 388 MSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGA 447

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           +  A+ + DEM   G   +VVTYN+ ++                  L K+K  A+ D + 
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNG-----------------LCKKKMFADADMLF 490

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
           ++    + E G   +     F  L+      G  +          L +F+ M +  +KP+
Sbjct: 491 NE----MVERGMVPD--FYTFTTLIRGYCKDGNMDKA--------LNLFEAMVRTNLKPD 536

Query: 645 VVTFSAILNACSRCNSFEDASMLLEEL 671
            VT++ +++   +      A  L +++
Sbjct: 537 KVTYNTLIDGFCKAGEMGRAKELWDDM 563



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 144/325 (44%), Gaps = 46/325 (14%)

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            + Y+ L+  Y +  K  E    F+ ++   VS ++   + L+    + G    A +I+ 
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E  + G++ +V   + +++ALCK+   E+ +  L +M  +G+  ++VTYN++I+A+ R  
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306

Query: 559 TTECTVDDVER------DLGKQKESANLDAMCSQDDKD--------VQEAGRTDNQIIKV 604
             E     +        + G    +A L  +C     D        + + G T N     
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNA--AT 364

Query: 605 FGQLVAEKAGQGKKENRCRQE-ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           +  L+ E          CR++ IL    +F +M +  + P++V+FS+++   +R      
Sbjct: 365 YNTLLVEI---------CRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQ 415

Query: 664 ASMLLEELR----LFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVK----LMDSSTASA 714
           A M   E+     + DN +Y +   L+ G+ R+     AL + DE+      MD  T + 
Sbjct: 416 ALMHFREMERSGIVPDNVIYTI---LIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472

Query: 715 FYNAL--------TDMLWHFGQKRG 731
           F N L         DML++   +RG
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERG 497


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 204/393 (51%), Gaps = 3/393 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +T ++  L     +  A++     + R  R ND   L + ++  L + GK   A  ++  
Sbjct: 424 FTTIIHWLCMNSRFESALRFLREMLLRNMRPND--GLLTTLVGGLCKEGKHSDAVELWFR 481

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L +G+G  +   +ALI    ++G  QEA+ +   M       + +TYN +I  C K G 
Sbjct: 482 LLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEG- 540

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +   ++  +M++ G++PD  T+N L+    R G  + A NL+NE   R +  +++TY 
Sbjct: 541 KVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYG 600

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            ++D  CK  +++   ++  E+  +N+  N V Y+T+I  Y + G   +A  +  +M+  
Sbjct: 601 VMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSK 660

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI     +Y++++     +GR E+A  +  EM   G+  + V Y AL+GGY K G+ D+V
Sbjct: 661 GIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKV 720

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + ++M +  + PN +TY+ +ID YSK G  K A ++  E    G+  D V Y+ L + 
Sbjct: 721 VNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNG 780

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            CK G +E    + D M++EG+  + +TY +++
Sbjct: 781 FCKEGKIEEGFKICDYMSQEGLPLDEITYTTLV 813



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 233/504 (46%), Gaps = 48/504 (9%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           K  + ++S L +  +++ +  +FET + +G    VY FS  I+A+ + G  ++AI +F  
Sbjct: 213 KTCTFLLSSLVKANELEKSYWVFET-MRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFD 271

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M++  + PN+VTYN +I   C  G +D        + M+++GV    IT++ L+    + 
Sbjct: 272 MEKLGVSPNVVTYNNLIHGLCKHGNLD--EAFRFKEKMVKDGVNATLITYSVLINGLMKL 329

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
             +  A ++  E + +G   +   YNTL+D  CK   +  A  I  +M +K I+PN VT 
Sbjct: 330 EKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTL 389

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +++I G+ K G+++ A  +  EM   G  ++  ++ T++       RFE AL   +EM  
Sbjct: 390 NSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLL 449

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             +R +      L+GG  K+GK+ +   ++ ++       NL+T + LI    K G  +E
Sbjct: 450 RNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQE 509

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A+++ ++  + G   D + Y+ LI   CK G VE    L  EM K+GI P+  TYN +I 
Sbjct: 510 AVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIH 569

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD--KDVQEAGRTDNQIIKVFGQLVA 610
              R              +GK  E+ NL   C   D   +V   G      + + G   A
Sbjct: 570 GMCR--------------IGKLDEAVNLWNECKSRDLVPNVYTYG------VMIDGYCKA 609

Query: 611 EKAGQGKK---------------------ENRCRQ-EILCILGVFQKMHKLKIKPNVVTF 648
           +K  +G+K                        CR    +    +   M    I P   T+
Sbjct: 610 DKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATY 669

Query: 649 SAILNACSRCNSFEDASMLLEELR 672
           S++++        EDA  L++E+R
Sbjct: 670 SSLIHGMCNIGRMEDAKCLIDEMR 693



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 186/776 (23%), Positives = 322/776 (41%), Gaps = 157/776 (20%)

Query: 57  PSPRNAP--KPAATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPK 114
           P+P   P  +P    T+ AP+P      SPLPS     + D +  +S   +       P 
Sbjct: 11  PTPIFCPIARPLTCVTSAAPHPP-----SPLPSQNQPPSSDHALLKSVTSI----LSNPS 61

Query: 115 IAMSTRHSVVAEEALHHVTAF---ARDDVSLGDILKKFEF--KLCG----ADDYTFLLRE 165
           +  +    ++   + H   +     R +V+    L  F F    CG       Y  L+R 
Sbjct: 62  LDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCVLMRS 121

Query: 166 LGNRGEWSKAIQCFAFAVKRE------ERKNDQGKLASAMISI--LGRLG----KVDL-- 211
           L   G  S A       + R+      + KN   ++ASAM  +  +G  G     VDL  
Sbjct: 122 LIVSGFVSPARLLLIRLIDRKLPVLFGDPKNRHIEIASAMADLNEVGESGVAVAAVDLLI 181

Query: 212 --------------AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
                         A  +F    N+G   TV   + L+S+  ++   +++  VF +M R 
Sbjct: 182 HVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQ 240

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
            + P++  ++  I+A  KGG   +  +++F DM + GV P+ +T+N+L+  +C  G L E
Sbjct: 241 GVSPDVYLFSTAINAFCKGG-KVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDE 299

Query: 317 AARNLFNE-MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           A R  F E MV  G++  + TY+ L++ + K  + + A  ++ E   K  +PN V Y+T+
Sbjct: 300 AFR--FKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTL 357

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG- 434
           IDGY K G L DAL +  +M   GI  + V+ N+++  + K+G+ E+A  + +EM S G 
Sbjct: 358 IDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGF 417

Query: 435 ----------------------------------IRKDAVTYNALLGGYGKQGKYDEVRR 460
                                             +R +      L+GG  K+GK+ +   
Sbjct: 418 SINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVE 477

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           ++ ++       NL+T + LI    K G  +EA+++ ++  + G   D + Y+ LI   C
Sbjct: 478 LWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCC 537

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           K G VE    L  EM K+GI P+  TYN +I    R              +GK  E+ NL
Sbjct: 538 KEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCR--------------IGKLDEAVNL 583

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
              C   D                                                    
Sbjct: 584 WNECKSRD---------------------------------------------------- 591

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG-LLMGY-RDNIWVQAL 698
           + PNV T+  +++   + +  E+   L  EL   + ++  V +  L+  Y R+   V+A 
Sbjct: 592 LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAF 651

Query: 699 SLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
            L D+++       +A Y++L   + + G+   A+ ++ E ++  +  NV   + L
Sbjct: 652 KLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTAL 707



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 225/485 (46%), Gaps = 21/485 (4%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L + G +D A    E  + +G   T+  +S LI+   +     EA SV        
Sbjct: 287 LIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKG 346

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             PN V YN +ID   K G +    + I  DM+  G+ P+ +T NS++    + G  E A
Sbjct: 347 FTPNEVVYNTLIDGYCKMG-NLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQA 405

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +  EM+ RG   +   + T++  +C  ++ + A   + EM  +N+ PN    +T++ G
Sbjct: 406 ECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGG 465

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K G+  DA+ ++  +   G G + V+ N ++    K G  +EA+ + K+M   G   D
Sbjct: 466 LCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLD 525

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            +TYN L+ G  K+GK +E  ++  +M    + P+  TY+ LI    + G   EA+ ++ 
Sbjct: 526 KITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWN 585

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E K   L  +V  Y  +ID  CK   +E    L  E+  + +  N V YN++I A+ R+ 
Sbjct: 586 ECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNG 645

Query: 559 TT--ECTVDDVERDLGKQKESAN----LDAMCS----QDDKDVQEAGRTDNQIIKV--FG 606
            T     + D  R  G    +A     +  MC+    +D K + +  R +  +  V  + 
Sbjct: 646 NTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYT 705

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            L+      G+ +         ++ V Q+M    I PN +T++ +++  S+    + A+ 
Sbjct: 706 ALIGGYCKLGQMDK--------VVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAK 757

Query: 667 LLEEL 671
           LL E+
Sbjct: 758 LLHEM 762



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 195/380 (51%), Gaps = 7/380 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I    ++G+++ A+ I E  L+ G+     AF+ +I     +   + A+     M  
Sbjct: 390 NSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLL 449

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKH--VVEIFDDMLRNGVQPDRITFNSLL-AVCSRGG 313
            N++PN      ++    K G   KH   VE++  +L  G   + +T N+L+  +C  G 
Sbjct: 450 RNMRPNDGLLTTLVGGLCKEG---KHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGN 506

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           + EA R L  +M+ RG   D  TYNTL+   CK  +++  F++  EM  + I P+  TY+
Sbjct: 507 MQEAVR-LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYN 565

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I G  + G+LD+A+N+++E K   +  +  +Y  ++  Y K  + EE   +  E+ + 
Sbjct: 566 LLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ 625

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            +  ++V YN L+  Y + G   E  ++ + M++  + P   TYS+LI      G  ++A
Sbjct: 626 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 685

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             +  E ++ GL  +VV Y+ALI   CK G ++  V++L EM+   I PN +TY  +ID 
Sbjct: 686 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG 745

Query: 554 FGRSATTECTVDDVERDLGK 573
           + +S   +     +   +GK
Sbjct: 746 YSKSGDMKTAAKLLHEMVGK 765



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 130/254 (51%), Gaps = 7/254 (2%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  + R+GK+D A N++    +      VY +  +I  Y ++   +E   +F  +   N
Sbjct: 567 LIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN 626

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIF---DDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           L+ N V YN +I A  + G    + VE F   DDM   G+ P   T++SL+      G  
Sbjct: 627 LELNSVVYNTLIRAYCRNG----NTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 682

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A+ L +EM   G+  ++  Y  L+   CK  QMD    ++ EM + +I PN +TY+ M
Sbjct: 683 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 742

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDGY+K+G +  A  +  EM   GI  D V+YN + + + K G+ EE   +C  M   G+
Sbjct: 743 IDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGL 802

Query: 436 RKDAVTYNALLGGY 449
             D +TY  L+ G+
Sbjct: 803 PLDEITYTTLVHGW 816



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 3/192 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    R G    A  + +   ++G   T   +S+LI      G  ++A  + + M++
Sbjct: 635 NTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRK 694

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             L PN+V Y A+I   C  G +D   VV +  +M    + P++IT+  ++   S+ G  
Sbjct: 695 EGLLPNVVCYTALIGGYCKLGQMD--KVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDM 752

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  L +EMV +GI  D  TYN L +  CK  +++  F+I   M  + +  + +TY+T+
Sbjct: 753 KTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTL 812

Query: 376 IDGYAKAGRLDD 387
           + G+ +   L +
Sbjct: 813 VHGWQQPSALTN 824


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 200/406 (49%), Gaps = 41/406 (10%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            +++I    R+GK   A  + E     G    V  ++ LIS Y +SG    A+ V +   
Sbjct: 95  CTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLD--- 151

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
           R N+ P++VTYN ++      G   K  +E+ D  L+    PD IT+  L+ A C   G+
Sbjct: 152 RMNVAPDVVTYNTILRTLCDSG-KLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGV 210

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA------------ 362
            +A + L +EM ++G   D+ TYN L++ ICK  ++D A + +  MP+            
Sbjct: 211 GQAMK-LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNI 269

Query: 363 -----------------------KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
                                  K  SP+VVT++ +I+   + G L  A+++  +M   G
Sbjct: 270 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 329

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
              + +SYN +L  + K  + + A+     M S G   D VTYN LL    K GK D   
Sbjct: 330 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 389

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +  Q+ +   SP L+TY+T+ID  SK G  + A+++  E ++ GLK D++ YS+L+  L
Sbjct: 390 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 449

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
            + G V+ A+    ++   GIRPN +TYNSI+    +S  T+  +D
Sbjct: 450 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAID 495



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 184/350 (52%), Gaps = 3/350 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A  + +  L +     V  ++ LI A  +     +A+ + + M+    KP++VTY
Sbjct: 173 GKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTY 232

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +I+  C +G +D    ++  ++M   G QP+ IT N +L      G W  A  L ++M
Sbjct: 233 NVLINGICKEGRLD--EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDM 290

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           + +G    + T+N L++ +C+   +  A +I+ +MP    +PN ++Y+ ++ G+ K  ++
Sbjct: 291 LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 350

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D A+     M   G   D V+YNT+L+   K G+ + A+ +  ++ S G     +TYN +
Sbjct: 351 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTV 410

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K GK +   ++ ++M+   + P+++TYS+L+   S+ G   EA++ F + +  G+
Sbjct: 411 IDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGI 470

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           + + + Y++++  LCK+   + A+  L  M  +  +P   TY  +I+   
Sbjct: 471 RPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIA 520



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 216/451 (47%), Gaps = 37/451 (8%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R G+++      E+ +  G    +   ++LI  + R G  ++A  V   +++    P+
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           ++TYN +I   C  G +D  + +++ D M    V PD +T+N++L      G  + A  +
Sbjct: 127 VITYNVLISGYCKSGEID--NALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEV 181

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            +  + +    D+ TY  L++A CK + +  A +++ EM  K   P+VVTY+ +I+G  K
Sbjct: 182 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 241

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            GRLD+A+   + M   G   + +++N +L      GR+ +A  +  +M   G     VT
Sbjct: 242 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 301

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           +N L+    +QG       + E+M     +PN L+Y+ L+  + K      A++      
Sbjct: 302 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 361

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G   D+V Y+ L+ ALCK+G V+ AV +L++++ +G  P ++TYN++ID   +   TE
Sbjct: 362 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 421

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
                        +    LD M        +  G   + I   +  LV+  + +GK +  
Sbjct: 422 -------------RAIKLLDEM--------RRKGLKPDII--TYSSLVSGLSREGKVDEA 458

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
            +         F  +  L I+PN +T+++I+
Sbjct: 459 IK--------FFHDLEGLGIRPNAITYNSIM 481



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 187/383 (48%), Gaps = 40/383 (10%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +LR L + G+  +A++     +++E   +      + +I    +   V  A  + + 
Sbjct: 162 YNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVIT--YTILIEATCKESGVGQAMKLLDE 219

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
             N+G    V  ++ LI+   + G   EAI   N+M  Y  +PN++T+N ++ + C  G 
Sbjct: 220 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTG- 278

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM------------ 325
             +    ++  DMLR G  P  +TFN L+    R GL   A ++  +M            
Sbjct: 279 -RWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSY 337

Query: 326 -----------------------VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
                                  V RG   DI TYNTLL A+CK  ++D+A EI+ ++ +
Sbjct: 338 NPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSS 397

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
           K  SP ++TY+T+IDG +K G+ + A+ +  EM+  G+  D ++Y++++S  ++ G+ +E
Sbjct: 398 KGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE 457

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A+    ++E  GIR +A+TYN+++ G  K  + D        M +    P   TY+ LI+
Sbjct: 458 AIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIE 517

Query: 483 VYSKGGLYKEAMQIFREFKQAGL 505
             +  GL KEA+ +  E    GL
Sbjct: 518 GIAYEGLAKEALDLLNELCSRGL 540



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/434 (22%), Positives = 200/434 (46%), Gaps = 39/434 (8%)

Query: 240 RSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH--VVEIFDDMLRNGVQP 297
           R+G  ++      SM      P+++   ++I    + G   K   V+EI +   ++G  P
Sbjct: 69  RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILE---QSGAVP 125

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
           D IT+N L++   + G  + A  + + M    +  D+ TYNT+L  +C   ++  A E++
Sbjct: 126 DVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVL 182

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
                K   P+V+TY+ +I+   K   +  A+ +  EM+  G   D V+YN +++   K 
Sbjct: 183 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 242

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           GR +EA+     M S G + + +T+N +L      G++ +  ++   M     SP+++T+
Sbjct: 243 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 302

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           + LI+   + GL   A+ I  +    G   + + Y+ L+   CK   ++ A+  LD M  
Sbjct: 303 NILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS 362

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
            G  P++VTYN+++ A  +    +  V+ +                        Q + + 
Sbjct: 363 RGCYPDIVTYNTLLTALCKDGKVDVAVEILN-----------------------QLSSKG 399

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
            + ++  +  ++   +  GK E   +        +  +M +  +KP+++T+S++++  SR
Sbjct: 400 CSPVLITYNTVIDGLSKVGKTERAIK--------LLDEMRRKGLKPDIITYSSLVSGLSR 451

Query: 658 CNSFEDASMLLEEL 671
               ++A     +L
Sbjct: 452 EGKVDEAIKFFHDL 465



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/377 (23%), Positives = 163/377 (43%), Gaps = 29/377 (7%)

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           R G  E        MV+RG   DI    +L+   C+  +   A  +M  +      P+V+
Sbjct: 69  RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TY+ +I GY K+G +D+AL +   M    +  D V+YNT+L      G+ ++A+ V    
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 185

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
                  D +TY  L+    K+    +  ++ ++M+     P+++TY+ LI+   K G  
Sbjct: 186 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            EA++        G + +V+ ++ ++ ++C  G    A  LL +M ++G  P+VVT+N +
Sbjct: 246 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 305

Query: 551 IDAFGRSATTECTVDDVER----DLGKQKESAN--LDAMCSQDDKD---------VQEAG 595
           I+   R       +D +E+           S N  L   C +   D         V    
Sbjct: 306 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 365

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
             D   I  +  L+      GK +          + +  ++      P ++T++ +++  
Sbjct: 366 YPD---IVTYNTLLTALCKDGKVD--------VAVEILNQLSSKGCSPVLITYNTVIDGL 414

Query: 656 SRCNSFEDASMLLEELR 672
           S+    E A  LL+E+R
Sbjct: 415 SKVGKTERAIKLLDEMR 431



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 124/279 (44%), Gaps = 36/279 (12%)

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           + G+ ++  +  E M      P+++  ++LI  + + G  K+A  +    +Q+G   DV+
Sbjct: 69  RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y+ LI   CK+G +++A+ +LD M    + P+VVTYN+I+        T C       D
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTIL-------RTLC-------D 171

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
            GK K++  +       D+ +Q+    D     +  +   +++G G+            +
Sbjct: 172 SGKLKQAMEVL------DRQLQKECYPDVITYTILIEATCKESGVGQA-----------M 214

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYR 690
            +  +M     KP+VVT++ ++N   +    ++A   L  +  +  Q   + H +++   
Sbjct: 215 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 274

Query: 691 DNI--WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
            +   W+ A  L  ++     S +   +N L + L   G
Sbjct: 275 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQG 313


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 242/493 (49%), Gaps = 24/493 (4%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           +V  A +IFE  L +G   T   ++ LI      G  ++A  +   M+ + L P+   +N
Sbjct: 297 EVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFN 356

Query: 268 AVIDACGKGGVD---FKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFN 323
            VI    KG ++   +K  V +F +M  +G+ PD  T+N L+  +C R  + EA  NL+ 
Sbjct: 357 MVI----KGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREAL-NLWE 410

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           +M   G+   I TY++LL   C    MD A ++  EMP K  +PNVVTY+T++ G+    
Sbjct: 411 KMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKA 470

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
             D A  + +EMK  G+  +  +YNT+++    +GR  E   + K  E+ G    A+TYN
Sbjct: 471 AFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYN 530

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           +++ G+ K G       +++QM A  + PN++TY++ ID Y K      A+++  + +  
Sbjct: 531 SIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCK 590

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           GL+ D+  Y++LI   C+ G +  A+ +L  M K+G+ PN+  YNS I  +      E  
Sbjct: 591 GLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEA 650

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
           +   E+ +   KE  +LD        D           +K++ ++VA+            
Sbjct: 651 LRLYEKMI---KEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTAL 707

Query: 624 QEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML----LEELR 672
              LC  G       +  +M++L I+PNV+ ++ ++N   R    ++A  L    LE   
Sbjct: 708 THGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKI 767

Query: 673 LFDNQVYGVAHGL 685
           + D+  Y +  G+
Sbjct: 768 MPDDTTYDILVGM 780



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 174/346 (50%), Gaps = 3/346 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +D A  ++     +G+   V  ++ L+  +       +A ++   MK+  +  N  TY
Sbjct: 435 GCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTY 494

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +I+  C  G V    V E+       G  P  +T+NS++    + G+  +A  ++ +M
Sbjct: 495 NTLINGLCVVGRV--CEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             +GI  +I TY + +D  CK +  DLA +++ ++  K + P++  Y+++I G+ + G +
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNM 612

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             AL +   M   G+  +   YN+ ++ Y  L   EEAL + ++M   GI  D  TY  L
Sbjct: 613 SHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTL 672

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G+ K G      +++ +M A    P+ +T++ L     + G   +A ++  E  +  +
Sbjct: 673 IDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDI 732

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           + +V++Y+ LI+   +NG ++ A  L DEM +  I P+  TY+ ++
Sbjct: 733 RPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 195/444 (43%), Gaps = 33/444 (7%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           + F  ++ A  + G   +A+ +F+ M    ++P+    +  I +  K   D    + +  
Sbjct: 178 WMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR-DANRALLVLR 236

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M   G  P   TFNS++ V  +GG  E A ++ +E++  G    +    TL+   C   
Sbjct: 237 KMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQR 296

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++  A +I  E     + P  VTY+ +I G  + G  + A  +  +M+  G+      +N
Sbjct: 297 EVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFN 356

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            V+        +++A+ + KEM  SGI  DA TYN L+    ++ K  E   ++E+M   
Sbjct: 357 MVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNET 415

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V P ++TY +L+  Y   G   EA++++ E    G   +VV Y+ L+         + A
Sbjct: 416 GVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKA 475

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
            +LL EM + G+  N  TYN++I+         C V  V  ++G+  +    +       
Sbjct: 476 YALLAEMKQNGVSCNDYTYNTLINGL-------CVVGRV-CEVGEMLKRFETEGFVP--- 524

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
                   T N II  F      KAG                 V+Q+M    I PN+VT+
Sbjct: 525 -----TAMTYNSIINGF-----IKAGMMGSA----------FAVYQQMCAKGIPPNIVTY 564

Query: 649 SAILNACSRCNSFEDASMLLEELR 672
           ++ ++   + +  + A  +L ++R
Sbjct: 565 TSFIDGYCKTSCCDLALKMLNDVR 588



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 162/333 (48%), Gaps = 11/333 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQ--GKLASAMISILGRLGKVDLAKNIF 216
           YT L++   N+  + KA    A   +     ND     L + +  ++GR+ +V      F
Sbjct: 459 YTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGL-CVVGRVCEVGEMLKRF 517

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
           ET   EG+  T   ++++I+ + ++G    A +V+  M    + PN+VTY + ID  C  
Sbjct: 518 ET---EGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKT 574

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDI 334
              D    +++ +D+   G++PD   +NSL+   C  G +  A + L   M+  G+  +I
Sbjct: 575 SCCDL--ALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLV-LMLKDGLLPNI 631

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
             YN+ +        M+ A  +  +M  + I  +  TY+T+IDG++K G +  AL ++SE
Sbjct: 632 SVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSE 691

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G   D +++  +     + G  ++A  +  EM    IR + + YN L+ GY + GK
Sbjct: 692 MVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGK 751

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
             E  R+ ++M    + P+  TY  L+ + S G
Sbjct: 752 LQEAFRLHDEMLERKIMPDDTTYDILVGMKSLG 784



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 125/258 (48%), Gaps = 1/258 (0%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           GV PD  +   LLAV +R      A  L  EM  +G   D + ++ ++ A  K    D A
Sbjct: 137 GVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGMYDDA 196

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             +  EMPA  I P+    S  I    K    + AL +  +M+  G      ++N+V+ +
Sbjct: 197 VRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDV 256

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
             K GR EEAL +  E+ ++G +   V    L+ GY  Q +  +   +FE+   D + P 
Sbjct: 257 LVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPT 316

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +TY+ LI   ++ G+ ++A ++ R+ +  GL      ++ +I  L  + L + AVSL  
Sbjct: 317 DVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFK 376

Query: 534 EMTKEGIRPNVVTYNSII 551
           EM   GI P+  TYN +I
Sbjct: 377 EMADSGI-PDAFTYNILI 393



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 90/383 (23%), Positives = 162/383 (42%), Gaps = 58/383 (15%)

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M+  G+  D  S   +L++ A+     +AL +  EM   G   DA  ++ ++    K+G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 455 YDEVRRMFEQMKADCVSPNL-----------------------------------LTYST 479
           YD+  R+F++M A  + P+                                     T+++
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           ++DV  KGG  +EA+ I  E    G K  VVL + L+   C    V  A+ + +E  ++G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           + P  VTY  +I        TE  + +   +L +Q     L  + S ++ ++   G  ++
Sbjct: 313 LVPTDVTYTVLI-----RGCTEEGMPEKAYELCRQMRDHGL--LPSTNEFNMVIKGLLND 365

Query: 600 QIIKVFGQLVAEKAGQGKKEN---------RC-RQEILCILGVFQKMHKLKIKPNVVTFS 649
           ++ K    L  E A  G  +           C R++I   L +++KM++  +KP +VT+ 
Sbjct: 366 KLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYH 425

Query: 650 AILNACSRCNSFEDASMLLEEL--RLFDNQVYGVAHGLLMGYRDN--IWVQALSLFDEVK 705
           ++L         ++A  L  E+  + F   V  V +  LM    N   + +A +L  E+K
Sbjct: 426 SLLLCYCVNGCMDEAVKLYTEMPGKGFTPNV--VTYTTLMKGHINKAAFDKAYALLAEMK 483

Query: 706 LMDSSTASAFYNALTDMLWHFGQ 728
               S     YN L + L   G+
Sbjct: 484 QNGVSCNDYTYNTLINGLCVVGR 506



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 33/287 (11%)

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M+A  V+P+  + + L+ V ++     +A+ +  E +  G   D  ++  ++ A  K G+
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFG--RSATTECTVDDVERDLGKQKESANLDA 582
            + AV L DEM    I P+    +  I +    R A     V    +D G        ++
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK----------ENRCRQ-EILCILG 631
           +      DV   G    + + +  +L+A     GKK             C Q E+   L 
Sbjct: 253 VV-----DVLVKGGRMEEALHIKDELLA----TGKKMSVVLATTLMHGYCLQREVRKALD 303

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR-----LFDNQVYGVAHGLL 686
           +F++  +  + P  VT++ ++  C+     E A  L  ++R        N+   V  GLL
Sbjct: 304 IFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLL 363

Query: 687 MGYRDNIWVQALSLFDEVKLMDSSTASAF-YNALTDMLWHFGQKRGA 732
               D +W  A+SLF E  + DS    AF YN L   L    + R A
Sbjct: 364 ---NDKLWKDAVSLFKE--MADSGIPDAFTYNILIHWLCQRRKIREA 405


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 195/358 (54%), Gaps = 4/358 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+ L R  +  +A ++    +  GY   V   S+LI+ + +     +AI + + M+   
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +P++V YN +ID   K G+     VE+FD M R+GV+ D +T+NSL+A     G W  A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGL-VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L  +MV R I  ++ T+  ++D   K  +   A ++  EM  + + P+V TY+++I+G
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
               GR+D+A  M   M   G   D V+YNT+++ + K  R +E   + +EM   G+  D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            +TYN ++ GY + G+ D  + +F +M +    PN+ TYS L+         ++A+ +F 
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFE 405

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             +++ ++ D+  Y+ +I  +CK G VE A  L   ++ +G++P+VV+Y ++I  F R
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 173/287 (60%)

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           +  ++ +  +++F  M+++   P  + F+ +L+  ++   ++   +LF+ M   GI  D+
Sbjct: 45  RSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDL 104

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
           ++YN +++ +C+ ++  +A  ++ +M      P+VVT S++I+G+ +  R+ DA+++ S+
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M+ +G   D V YNT++    K+G   +A+ +   ME  G+R DAVTYN+L+ G    G+
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
           + +  R+   M    + PN++T++ +IDV+ K G + EAM+++ E  +  +  DV  Y++
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           LI+ LC +G V+ A  +LD M  +G  P+VVTYN++I+ F +S   +
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 187/365 (51%), Gaps = 4/365 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++S + +    DL  ++F      G G+ +Y+++ +I+   R      A+SV   M +
Sbjct: 73  SKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMK 132

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           +  +P++VT +++I+   +G   F   +++   M   G +PD + +N+++    + GL  
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVF-DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF+ M   G+  D  TYN+L+  +C   +   A  +M +M  ++I PNV+T++ +I
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D + K G+  +A+ ++ EM    +  D  +YN++++     GR +EA  +   M + G  
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTYN L+ G+ K  + DE  ++F +M    +  + +TY+T+I  Y + G    A +I
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F        + ++  YS L+  LC N  VE A+ L + M K  I  ++ TYN +I    +
Sbjct: 372 FSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428

Query: 557 SATTE 561
               E
Sbjct: 429 IGNVE 433



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 170/310 (54%), Gaps = 1/310 (0%)

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           +E I +F  M +    P++V ++ V+    K   ++  V+ +F  M   G+  D  ++N 
Sbjct: 51  EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSK-NYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           ++    R   +  A ++  +M+  G + D+ T ++L++  C+G ++  A +++++M    
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
             P+VV Y+T+IDG  K G ++DA+ +F  M+  G+  D V+YN++++     GR+ +A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            + ++M    I  + +T+ A++  + K+GK+ E  +++E+M   CV P++ TY++LI+  
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
              G   EA Q+       G   DVV Y+ LI+  CK+  V+    L  EM + G+  + 
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349

Query: 545 VTYNSIIDAF 554
           +TYN+II  +
Sbjct: 350 ITYNTIIQGY 359



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 132/246 (53%), Gaps = 6/246 (2%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V  F+A+I  + + G   EA+ ++  M R  + P++ TYN++I+  C  G VD     ++
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD--EAKQM 301

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
            D M+  G  PD +T+N+L+    +    +    LF EM  RG+  D  TYNT++    +
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             + D A EI + M ++   PN+ TYS ++ G     R++ AL +F  M+   I LD  +
Sbjct: 362 AGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITT 418

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN V+    K+G  E+A  + + +   G++ D V+Y  ++ G+ ++ ++D+   ++ +M+
Sbjct: 419 YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478

Query: 467 ADCVSP 472
            D + P
Sbjct: 479 EDGLLP 484



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 126/285 (44%), Gaps = 37/285 (12%)

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           EE  L CK ++S  +    V ++ +L    K   YD V  +F  M+   +  +L +Y+ +
Sbjct: 52  EEIDLFCKMIQSRPL-PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I+   +   +  A+ +  +  + G + DVV  S+LI+  C+   V  A+ L+ +M + G 
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
           RP+VV YN+IID   +       V+  +R    +++    DA+                 
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDR---MERDGVRADAV----------------- 210

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
               +  LVA     G+  +  R        + + M    I PNV+TF+A+++   +   
Sbjct: 211 ---TYNSLVAGLCCSGRWSDAAR--------LMRDMVMRDIVPNVITFTAVIDVFVKEGK 259

Query: 661 FEDASMLLEEL--RLFDNQVY---GVAHGLLMGYRDNIWVQALSL 700
           F +A  L EE+  R  D  V+    + +GL M  R +   Q L L
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 153/593 (25%), Positives = 271/593 (45%), Gaps = 54/593 (9%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           +D A  +  + +++G    +Y +  LI+ +      +EA  +   M    LKP  +TYNA
Sbjct: 257 LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNA 316

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           +ID   + G D +    I D+M+  G++ + I +N+LL    + G  E A  +  EM+ +
Sbjct: 317 LIDGFMRQG-DIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEK 375

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G++ D  TY+ L++  C+G  M  AFE++ EM  + ++P V+TYS +I+G  + G L   
Sbjct: 376 GVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGT 435

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             +  EM   G+  + V Y T+++ +AK GR EE+ ++ + M   GI  D   YN+L+ G
Sbjct: 436 NAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIG 495

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           + K  + +E R    +M    + PN  TY   ID YSK G  + A + F E    G+  +
Sbjct: 496 FCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPN 555

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
           V +Y+ALI+  CK G V  A S+   +    +  +V TY+ +I    R+           
Sbjct: 556 VGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRN----------- 604

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEIL 627
              GK  E+  + +       ++QE G   N     +  L++    QG  +   +  E +
Sbjct: 605 ---GKMHEAFGIFS-------ELQEKGLLPNAF--TYNSLISGSCKQGNVDKASQLLEEM 652

Query: 628 CILGV--------------------------FQKMHKLKIKPNVVTFSAILNACSRCNSF 661
           CI G+                          F  +    + PN VT++A+++   +  + 
Sbjct: 653 CIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNP 712

Query: 662 EDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
             A  LLEE+ L         + +++ +  ++  + +AL LF E+ L     ++  +N L
Sbjct: 713 TAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM-LEKGFASTVSFNTL 771

Query: 720 TDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWL 772
            +     G+ + A  ++ E   +Q   N  + + L  H   +G        WL
Sbjct: 772 IEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWL 824



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 186/353 (52%), Gaps = 1/353 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           + GK++ A  I +  + +G       +S LI  + R      A  + + MK+  L P ++
Sbjct: 358 KAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVL 417

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TY+ +I+   + G + +    I  +M+ NG++P+ + + +L+   ++ G  E +R +   
Sbjct: 418 TYSVIINGLCRCG-NLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 476

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M  +GI  D+F YN+L+   CK  +M+ A   + EM  + + PN  TY   IDGY+KAG 
Sbjct: 477 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 536

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           ++ A   F+EM   G+  +   Y  ++  + K G   EA  V + + S  + +D  TY+ 
Sbjct: 537 MEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSV 596

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G  + GK  E   +F +++   + PN  TY++LI    K G   +A Q+  E    G
Sbjct: 597 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 656

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           +  D+V Y+ LID LCK G +E A +L D++   G+ PN VTY +++D + +S
Sbjct: 657 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKS 709



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 191/383 (49%), Gaps = 4/383 (1%)

Query: 186 EERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           E R         A I    + G++++A   F   L+ G    V  ++ALI  + + G   
Sbjct: 514 ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 573

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           EA SVF  +    +  ++ TY+ +I    + G        IF ++   G+ P+  T+NSL
Sbjct: 574 EAFSVFRFILSRRVLQDVQTYSVLIHGLSRNG-KMHEAFGIFSELQEKGLLPNAFTYNSL 632

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           ++   + G  + A  L  EM  +GI+ DI TYN L+D +CK  +++ A  +  ++  + +
Sbjct: 633 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 692

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           +PN VTY+ M+DGY K+     A  +  EM   G+  D   YN +L+   K  +FE+AL 
Sbjct: 693 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 752

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + +EM   G     V++N L+ GY K GK  E   + E+M      PN +TY++LID   
Sbjct: 753 LFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 811

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G+  EA +++ E ++  +      Y++L+      G +    +L +EM  +GI P+ +
Sbjct: 812 KAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 871

Query: 546 TYNSIIDAFGRSATT--ECTVDD 566
           TY  +IDA+ R       C + D
Sbjct: 872 TYYVMIDAYCREGNVMEACKLKD 894



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 144/564 (25%), Positives = 264/564 (46%), Gaps = 63/564 (11%)

Query: 133 TAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQ 192
           T+ A+ D+   D+L      LC ++ Y          G  S  I+C          +N  
Sbjct: 94  TSTAQQDL---DVLSALAVNLCNSNWY----------GPASDLIKCII--------RNSD 132

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
             LA     +LG + K   + N        G  N+V  F  L+ +Y + G+  EA++VF 
Sbjct: 133 SPLA-----VLGSIVKCYRSCN--------GSPNSVI-FDMLMDSYRKMGFLVEAVNVFL 178

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV-CSR 311
             K +  +P+L++ N+++    KG    +   ++FD M  + V PD  T+ ++++  C  
Sbjct: 179 GPKNFEFRPSLLSCNSLLGDLLKGN-KVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKV 237

Query: 312 GGLWEAARNLFN----------------EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           G + +A R L                   MV +G+  D++TY+ L++  C   +   A  
Sbjct: 238 GNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKL 297

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++ EM    + P  +TY+ +IDG+ + G ++ A  +  EM   GI  + + +NT+L+   
Sbjct: 298 MLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVC 357

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K G+ E+AL + +EM   G+  D+ TY+ L+ G+ +         + ++MK   ++P +L
Sbjct: 358 KAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVL 417

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TYS +I+   + G  +    I RE    GLK + V+Y+ L+ A  K G VE +  +L+ M
Sbjct: 418 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 477

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTE----CTVDDVERDLGKQKES--ANLDAMCSQDDK 589
            ++GI P+V  YNS+I  F ++   E      ++ +ER L     +  A +D      + 
Sbjct: 478 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 537

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTF 648
           ++  A R  N+++   G L          E  C++  +     VF+ +   ++  +V T+
Sbjct: 538 EI--ADRYFNEMLSC-GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTY 594

Query: 649 SAILNACSRCNSFEDASMLLEELR 672
           S +++  SR     +A  +  EL+
Sbjct: 595 SVLIHGLSRNGKMHEAFGIFSELQ 618



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 154/353 (43%), Gaps = 55/353 (15%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASA-----MISILGRLGKVDLAK 213
           Y+ L+  L   G+  +A   F+          ++G L +A     +IS   + G VD A 
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFS-------ELQEKGLLPNAFTYNSLISGSCKQGNVDKAS 646

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
            + E    +G    +  ++ LI    ++G  + A ++F+ ++   L PN VTY A++D  
Sbjct: 647 QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGY 706

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
            K   +     ++ ++ML  GV PD   +N +L  C +   +E A +LF EM+ +G    
Sbjct: 707 CKSK-NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAST 765

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           + ++NTL++  CK  ++  A  ++ EM  K   PN VTY+++ID   KAG + +A  ++ 
Sbjct: 766 V-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWL 824

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           EM+   +     +Y ++L  Y  +G   E   + +EM + GI  D +TY  ++  Y ++G
Sbjct: 825 EMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREG 884

Query: 454 -----------------------------------------KYDEVRRMFEQM 465
                                                      DE   +   M
Sbjct: 885 NVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSM 937



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 90/229 (39%), Gaps = 43/229 (18%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K + A ++F+  L +G+ +TV +F+ LI  Y +SG  QEA  +   M      PN VTY 
Sbjct: 746 KFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYT 804

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           ++ID   K G+       ++ +M    V P   T+ SLL      G       LF EMV 
Sbjct: 805 SLIDHNCKAGM-MGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVA 863

Query: 328 RGIDQDIFTYNTLLDAICK----------------------------------------- 346
           +GI+ D  TY  ++DA C+                                         
Sbjct: 864 KGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQI 923

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
              MD A E++  M       N  +   ++DG       +D+ N+  +M
Sbjct: 924 AGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 193/358 (53%), Gaps = 1/358 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L + G++  A+ +F      G    V  +++LI  YG+ G  +E   + + M++  
Sbjct: 206 VIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSG 265

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
              ++VTYNA+I+   K G   +     F +M R GV  + +TF++ +    + GL + A
Sbjct: 266 CAADVVTYNALINCFSKFG-RMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEA 324

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             LF +M  RG+  + FTY +L+D  CK  ++D A  ++ EM  + + PNVVTY+ M+DG
Sbjct: 325 MKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDG 384

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K G++ +A N+ S M+  G+  + + Y T++  +      E AL +  +M++ G+  D
Sbjct: 385 LCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELD 444

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
              Y  L+ G  K  K DE + +  +M    + PN + Y+T++D   K G   EA+ +  
Sbjct: 445 VSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLH 504

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           +   +G + +VV Y ALID LCK G +  A+S  ++M + G+ PNV  Y ++ID F +
Sbjct: 505 KILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCK 562



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 197/411 (47%), Gaps = 32/411 (7%)

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           PN+ T+N VID   K G +      +F  M   G  PD +T+NSL+    + G  E    
Sbjct: 198 PNVFTFNIVIDFLCKEG-ELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQ 256

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L +EM   G   D+ TYN L++   K  +M+ A+    EM  + +  NVVT+ST +D + 
Sbjct: 257 LVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFC 316

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K G + +A+ +F++M+  G+  +  +Y +++    K GR ++A+++  EM   G+  + V
Sbjct: 317 KEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 376

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY  ++ G  K+GK  E   +   M+   V  N L Y+TLI  +      + A+ +  + 
Sbjct: 377 TYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQM 436

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           K  G++ DV LY  LI  LCK+  V+ A SLL +M   G+RPN V Y +I+DA  ++   
Sbjct: 437 KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKA--- 493

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
                      GK+ E+  L          + ++G   N +   +  L+      G    
Sbjct: 494 -----------GKESEAVAL-------LHKILDSGFQPNVV--TYCALIDGLCKAGSISE 533

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                       F KM +L + PNV  ++A+++   +  S   A  L+ E+
Sbjct: 534 AISH--------FNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEM 576



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/427 (24%), Positives = 204/427 (47%), Gaps = 43/427 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+   + G+++ A + F     +G    V  FS  + A+ + G  QEA+ +F  M+ 
Sbjct: 274 NALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRV 333

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF-------------- 302
             + PN  TY +++D   K G      + + D+M+  G+ P+ +T+              
Sbjct: 334 RGMMPNEFTYTSLVDGTCKAG-RLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVA 392

Query: 303 --NSLLAVCSRGGL-------------------WEAARNLFNEMVHRGIDQDIFTYNTLL 341
             +++L++  RGG+                    E A +L N+M ++G++ D+  Y TL+
Sbjct: 393 EADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLI 452

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             +CK  ++D A  ++ +M    + PN V Y+T++D   KAG+  +A+ +  ++   G  
Sbjct: 453 WGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQ 512

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + V+Y  ++    K G   EA+    +M   G+  +   Y AL+ G+ K G  ++   +
Sbjct: 513 PNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHL 572

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
             +M    +S + + Y++LID Y K    ++A  +  +  ++GL+ D+  Y+  I   C 
Sbjct: 573 MNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCN 632

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
             +++ A  +L EM   GI P+   YN +I  + +       + ++E     Q E  ++ 
Sbjct: 633 MNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQK-------LGNMEEASSLQNEMESVL 685

Query: 582 AMCSQDD 588
           + C++DD
Sbjct: 686 SSCTEDD 692



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 182/374 (48%), Gaps = 38/374 (10%)

Query: 314 LWEAARNLFNEMVHRGID----QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
           L   ARN    +V R  D     ++FT+N ++D +CK  ++  A  +   M A   SP+V
Sbjct: 176 LLRLARNRQGGLVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDV 235

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           VTY+++IDGY K G L++   + SEM+  G   D V+YN +++ ++K GR E+A     E
Sbjct: 236 VTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGE 295

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M+  G+  + VT++  +  + K+G   E  ++F QM+   + PN  TY++L+D   K G 
Sbjct: 296 MKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGR 355

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
             +A+ +  E    GL  +VV Y+ ++D LCK G V  A ++L  M + G++ N + Y +
Sbjct: 356 LDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTT 415

Query: 550 IIDAFGRSATTECTVDDVERDLGKQKESANLD---------AMCSQDDKDVQEA------ 594
           +I     +  +E  +D + +   K  E   LD          +C   D+ V EA      
Sbjct: 416 LIHGHFMNNNSERALDLLNQMKNKGME---LDVSLYGTLIWGLCK--DQKVDEAKSLLHK 470

Query: 595 ----GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
               G   N +I         KAG+  +           + +  K+     +PNVVT+ A
Sbjct: 471 MAGCGLRPNTVIYTTIMDALFKAGKESEA----------VALLHKILDSGFQPNVVTYCA 520

Query: 651 ILNACSRCNSFEDA 664
           +++   +  S  +A
Sbjct: 521 LIDGLCKAGSISEA 534



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 43/245 (17%)

Query: 434 GIRKDAV--TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK---GG 488
           G R+ A+    + LL      G  D+  R   +++   V PN  T + ++   ++   GG
Sbjct: 127 GPRRSALPSVVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGG 186

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
           L +    +           +V  ++ +ID LCK G +  A +L   M   G  P+VVTYN
Sbjct: 187 LVRRLFDLLP-------VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYN 239

Query: 549 SIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
           S+ID +G+    E    +VE+ + + ++S      C+ D         T N +I  F + 
Sbjct: 240 SLIDGYGKCGDLE----EVEQLVSEMRKSG-----CAADVV-------TYNALINCFSKF 283

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
                  G+ E             F +M +  +  NVVTFS  ++A  +    ++A  L 
Sbjct: 284 -------GRMEKA--------YSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLF 328

Query: 669 EELRL 673
            ++R+
Sbjct: 329 AQMRV 333


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 231/469 (49%), Gaps = 21/469 (4%)

Query: 101 STRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYT 160
           S R  S+M      I+ ++ H +++  AL    AFA       D+ +     LC    + 
Sbjct: 107 SLRLYSRMKSLSLPISTASLHPLLS--ALPSAPAFAL----FADMFR-LRLPLC-TTTFN 158

Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF-ETA 219
            +LR L + G+ ++A++      ++  R N      + +I+     G+V  A +I  E  
Sbjct: 159 IMLRHLCSAGKPARALELL----RQMPRPN--AVTYNTVIAGFCSRGRVQAALDIMREMR 212

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVTYNAVIDA-CGKGG 277
              G     Y +  +IS + + G   EA+ VF+ M  +  +KP  V YNA+I   C +G 
Sbjct: 213 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 272

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D   +    D M+  GV     T+N L+      G    A  L  EM  +G+  D+FTY
Sbjct: 273 LDTALLYR--DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTY 330

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L++  CK   +  A EI   M  + +   VVTY+++I   +K G++ +   +F E   
Sbjct: 331 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 390

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI  D V YN +++ ++  G  + A  +  EME   I  D VTYN L+ G    G+ DE
Sbjct: 391 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 450

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            R++ ++M    + P+L+TY+TLI  YS  G  K+A++I  E    G    ++ Y+ALI 
Sbjct: 451 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 510

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            LCKNG  + A +++ EM + GI P+  TY S+I+  G +   E  +DD
Sbjct: 511 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE--GLTTEDERAIDD 557



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 189/396 (47%), Gaps = 53/396 (13%)

Query: 286 IFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +F DM R  +     TFN +L  +CS G   + AR L  E++ +    +  TYNT++   
Sbjct: 141 LFADMFRLRLPLCTTTFNIMLRHLCSAG---KPARAL--ELLRQMPRPNAVTYNTVIAGF 195

Query: 345 CKGAQMDLAFEIMAEMPAKN-ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG-IGL 402
           C   ++  A +IM EM  +  I+PN  TY T+I G+ K GR+D+A+ +F EM   G +  
Sbjct: 196 CSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 255

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           + V YN ++  Y   G+ + ALL    M   G+     TYN L+      G+  E   + 
Sbjct: 256 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 315

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           E+M    ++ ++ TY+ LI+ + K G  K+A++IF    + G++A VV Y++LI AL K 
Sbjct: 316 EEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKK 375

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           G V+    L DE  + GIRP++V YN++I++                       S N+D 
Sbjct: 376 GQVQETDKLFDEAVRRGIRPDLVLYNALINS--------------------HSTSGNID- 414

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQK 635
                            +  ++ G++  ++              LC+LG       +  +
Sbjct: 415 -----------------RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 457

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           M K  I+P++VT++ +++  S     +DA  +  E+
Sbjct: 458 MTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 493



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 37/285 (12%)

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +F++M  L + L   ++N +L      G+   AL + ++M     R +AVTYN ++ 
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 193

Query: 448 GYGKQGKYDEVRRMFEQMKA-DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG-L 505
           G+  +G+      +  +M+    ++PN  TY T+I  + K G   EA+++F E    G +
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           K + V+Y+ALI   C  G +++A+   D M + G+   V TYN ++ A           +
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
            VE   GK      LD                    I + G     K G  KK       
Sbjct: 314 LVEEMGGK---GLALDVFTYN---------------ILINGHC---KEGNVKKA------ 346

Query: 626 ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
               L +F+ M +  ++  VVT+++++ A S+    ++   L +E
Sbjct: 347 ----LEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDE 387


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 160/600 (26%), Positives = 275/600 (45%), Gaps = 78/600 (13%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I +L +  ++D A  +FE          VYA++ +I  YG +G   EA S+    KR
Sbjct: 312 TTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKR 371

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+++ YN ++   G+ G   +  + I D+M R    P+  T+N L+ +  + G  E
Sbjct: 372 KGCIPSVIAYNCILTCLGRKG-KVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELE 429

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AA  + + M   G+  +I T N ++D +CK  ++D A  I   +  K  SP+  T+ ++I
Sbjct: 430 AALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLI 489

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  + GR+DDA +++ +M       + V Y +++  + K GR E+   + KEM   G  
Sbjct: 490 DGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCS 549

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +  N+ +    K G+ ++ R +FE++KA  + P++ +YS LI    K G  +E  ++
Sbjct: 550 PDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKL 609

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP-------------- 542
           F E K+ GL  DV+ Y+ +ID  CK+G V+ A  LL+EM  +G++P              
Sbjct: 610 FYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAK 669

Query: 543 ---------------------NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
                                NVV Y+S+ID FG+              +G+  E+  + 
Sbjct: 670 IDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGK--------------VGRIDEAYLI- 714

Query: 582 AMCSQDDKDVQEAGRTDNQII--KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
                  +++ + G T N      +   LV  KA +  +   C          FQ M  L
Sbjct: 715 ------LEELMQKGLTPNSYTWNCLLDALV--KAEEIDEAQVC----------FQNMKNL 756

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGYRDNIWVQ 696
           K  PN +T+S ++N       F  A +  +E++   L  N +        +    N+ ++
Sbjct: 757 KCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNV-ME 815

Query: 697 ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDL 756
           A  LFD  K       SA YNA+ + L    +   A +V  E + +    N  S++C+ L
Sbjct: 816 ARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVN--SKTCVVL 873



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 221/477 (46%), Gaps = 33/477 (6%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L +  I   G++GKVD+A   F     +G       ++ LI    ++    EA+ +F  +
Sbjct: 275 LYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEEL 334

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
                 P +  YN +I   G  G  F     + +   R G  P  I +N +L    R G 
Sbjct: 335 DLNRSVPCVYAYNTMIMGYGSAG-KFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGK 393

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E A  + +EM  +    ++ TYN L+D +CK  +++ A ++   M    + PN++T + 
Sbjct: 394 VEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNI 452

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           MID   KA +LD+A ++F  +       D  ++ +++    + GR ++A  + ++M  S 
Sbjct: 453 MIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSD 512

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              + V Y +L+  + K G+ ++  +++++M     SP+L+  ++ +D   K G  ++  
Sbjct: 513 QIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGR 572

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +F E K  GL  DV  YS LI  L K G       L  EM ++G+  +V+ YN++ID F
Sbjct: 573 ALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGF 632

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            +S      VD   + L + K             K +Q         +  +G +V   A 
Sbjct: 633 CKSGK----VDKAYQLLEEMKT------------KGLQPT-------VVTYGSVVDGLA- 668

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              K +R  +  +    +F++   + +  NVV +S++++   +    ++A ++LEEL
Sbjct: 669 ---KIDRLDEAYM----LFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEEL 718



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/492 (23%), Positives = 222/492 (45%), Gaps = 79/492 (16%)

Query: 187 ERKNDQG---KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGY 243
           ERK  Q    ++ +A + ++ R   +D  + I E     G+G + +    L++++ +S  
Sbjct: 124 ERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHK 183

Query: 244 CQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
            +EA  V   M+++  +P    Y  +I A                  L    +PD +   
Sbjct: 184 LKEAFGVIEMMRKFKFRPAFSAYTTLIGA------------------LSAANRPDPML-- 223

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
                            LF++M   G + ++  + TL+    +  ++D A  ++ EM + 
Sbjct: 224 ----------------TLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSN 267

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
           + + ++V Y+  ID + K G++D A   F EMK  G+  D V+Y T++ +  K  R +EA
Sbjct: 268 SFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEA 327

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
           + + +E++ +        YN ++ GYG  GK+DE   + E+ K     P+++ Y+ ++  
Sbjct: 328 VELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTC 387

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             + G  +EA++I  E +Q     ++  Y+ LID LCK G +E+A+ + D M + G+ PN
Sbjct: 388 LGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPN 446

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS----QDDKDVQEAGRTDN 599
           ++T N +ID   ++                QK    LD  CS     D K      RT  
Sbjct: 447 IMTVNIMIDRLCKA----------------QK----LDEACSIFLGLDHKVCSPDSRTFC 486

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
            +I   G+       +G+ ++           +++KM      PNVV +++++    +C 
Sbjct: 487 SLIDGLGR-------RGRVDDA--------YSLYEKMLDSDQIPNVVVYTSLIQNFFKCG 531

Query: 660 SFEDASMLLEEL 671
             ED   + +E+
Sbjct: 532 RKEDGHKIYKEM 543


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 198/382 (51%), Gaps = 12/382 (3%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + SA+I  L + G+   + N+F    ++G    +  ++ +I  +  SG    A  +   M
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               + PN+VTYNA+I+A  K G  F    E++D+ML  G+ P+ IT+NS++    +   
Sbjct: 315 LERKISPNVVTYNALINAFVKEG-KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +AA ++F  M  +G   D+FT+ TL+D  C   ++D   E++ EMP + +  N VTY+T
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS- 433
           +I G+   G L+ AL++  +M   G+  D V+ NT+L      G+ ++AL + K M+ S 
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 434 ----------GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
                     G+  D +TYN L+ G   +GK+ E   ++E+M    + P+ +TYS++ID 
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K     EA Q+F          +VV ++ LI+  CK G V+  + L  EM + GI  +
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 544 VVTYNSIIDAFGRSATTECTVD 565
            + Y ++I  F +       +D
Sbjct: 614 AIIYITLIYGFRKVGNINGALD 635



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 240/505 (47%), Gaps = 47/505 (9%)

Query: 191 DQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISV 250
           D  KL  A++    R+ + DL  ++++    +     +Y+F+ LI  +        A+S 
Sbjct: 83  DFNKLMGAVV----RMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138

Query: 251 FNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVC 309
           F  + +  L P++VT+  ++      G+   H V    D+     +PD +TF +L+  +C
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLH-----GLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLC 193

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-PAKNISPN 368
             G + EA   L + MV  G+  D  TY T +D +CK      A  ++ +M    +I PN
Sbjct: 194 REGRVVEAVA-LLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPN 252

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           VV YS +IDG  K GR  D+ N+F EM+  GI  + V+YN ++  +   GR+  A  + +
Sbjct: 253 VVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQ 312

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
           EM    I  + VTYNAL+  + K+GK+ E   ++++M    + PN +TY+++ID + K  
Sbjct: 313 EMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 372

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
               A  +F      G   DV  ++ LID  C    ++  + LL EM + G+  N VTYN
Sbjct: 373 RLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYN 432

Query: 549 SIIDAFGRSATTECTVDDVER--DLGKQKESAN-----------LDAMCSQDDKDVQEAG 595
           ++I  F       C V D+    DL +Q  S+            LD +C  D+  +++A 
Sbjct: 433 TLIHGF-------CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC--DNGKLKDAL 483

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG------------VFQKMHKLKIKP 643
                + K    L A     G + +     IL I G            ++++M    I P
Sbjct: 484 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL-ICGLINEGKFLEAEELYEEMPHRGIVP 542

Query: 644 NVVTFSAILNACSRCNSFEDASMLL 668
           + +T+S++++   + +  ++A+ + 
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMF 567



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 155/315 (49%), Gaps = 45/315 (14%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI    +  ++D A+++F     +G    V+ F+ LI  Y  +    + + + + M R
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVD---------------------------------FKH 282
             L  N VTYN +I   C  G ++                                  K 
Sbjct: 422 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481

Query: 283 VVEIFDDMLR-----------NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            +E+F  M +           NGV+PD +T+N L+      G +  A  L+ EM HRGI 
Sbjct: 482 ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV 541

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  TY++++D +CK +++D A ++   M +K+ SPNVVT++T+I+GY KAGR+DD L +
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLEL 601

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F EM   GI  D + Y T++  + K+G    AL + +EM SSG+  D +T   +L G+  
Sbjct: 602 FCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWS 661

Query: 452 QGKYDEVRRMFEQMK 466
           + + +    M E ++
Sbjct: 662 KEELERAVAMLEDLQ 676



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 160/321 (49%), Gaps = 11/321 (3%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
            +  +++F DMLR+   P  I FN L+    R    +   +L+ +M  + I  DI+++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+   C  +++  A     ++    + P+VVT++T++ G     R+ +AL++F ++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
              D +++ T+++   + GR  EA+ +   M  +G++ D +TY   + G  K G      
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 460 RMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            +  +M +   + PN++ YS +ID   K G + ++  +F E +  G+  ++V Y+ +I  
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA----TTECTVDDVERDLGKQ 574
            C +G   +A  LL EM +  I PNVVTYN++I+AF +        E   + + R +   
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 575 KESAN--LDAMCSQDDKDVQE 593
             + N  +D  C QD  D  E
Sbjct: 358 TITYNSMIDGFCKQDRLDAAE 378



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 175/363 (48%), Gaps = 13/363 (3%)

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A +LF++M+       +  +N L+ A+ +  + DL   +  +M  K I  ++ +++ +
Sbjct: 63  EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 122

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I  +    +L  AL+ F ++  LG+  D V++ T+L       R  EAL +  ++     
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----C 178

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R D +T+  L+ G  ++G+  E   + ++M  + + P+ +TY T +D   K G    A+ 
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 496 IFREFKQAG-LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + R+ ++   +K +VV+YSA+ID LCK+G    + +L  EM  +GI PN+VTYN +I  F
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 555 ---GR-SATTECTVDDVERDLGKQKESAN-LDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
              GR SA      + +ER +     + N L     ++ K  + A   D  + +  G + 
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR--GIIP 356

Query: 610 AEKAGQGKKENRCRQEIL-CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
                    +  C+Q+ L     +F  M      P+V TF+ +++        +D   LL
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 669 EEL 671
            E+
Sbjct: 417 HEM 419



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 134/316 (42%), Gaps = 46/316 (14%)

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            E+A+ +  +M  S      + +N L+G   +  + D V  ++++M+   +  ++ +++ 
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LI  +        A+  F +  + GL  DVV ++ L+  LC +  V  A+ L  ++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC--- 178

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES-ANLDAMCSQDDKDVQEAGRTD 598
            RP+V+T+ ++++   R               G+  E+ A LD M         E G   
Sbjct: 179 -RPDVLTFTTLMNGLCRE--------------GRVVEAVALLDRMV--------ENGLQP 215

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK-IKPNVVTFSAILNACSR 657
           +QI   +G  V      G        + +  L + +KM ++  IKPNVV +SAI++   +
Sbjct: 216 DQI--TYGTFVDGMCKMG--------DTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCK 265

Query: 658 CNSFEDASMLLEELR---LFDNQVY--GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTA 712
                D+  L  E++   +F N V    +  G  +  R   W  A  L  E+     S  
Sbjct: 266 DGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGR---WSAAQRLLQEMLERKISPN 322

Query: 713 SAFYNALTDMLWHFGQ 728
              YNAL +     G+
Sbjct: 323 VVTYNALINAFVKEGK 338


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 156/566 (27%), Positives = 252/566 (44%), Gaps = 44/566 (7%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R  +++ AK  FE     G      A SALI  + R G   E + + + M    +  N
Sbjct: 20  LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPIN 79

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           L+TYN +I    K G   +   EI   M+  G +P+  TF  L+    R      A  L 
Sbjct: 80  LITYNVLIHGLCKFG-KMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 138

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           +EM  R +     +Y  +++ +C    + LA +++ +M    + PNVV YST+I GYA  
Sbjct: 139 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASE 198

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           GR+++A  +   M   G+  D   YN ++S  +K G+ EEA     E++  G++ DAVT+
Sbjct: 199 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 258

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
            A + GY K GK  E  + F++M    + PN   Y+ LI+ + K G   EA+ IFR    
Sbjct: 259 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHA 318

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
            G+  DV   SA I  L KNG V+ A+ +  E+ ++G+ P+V TY+S+I  F       C
Sbjct: 319 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF-------C 371

Query: 563 TVDDVERDLGKQKE-------------SANLDAMCSQDD--------KDVQEAGRTDNQI 601
              +VE+      E             +A +D +C   D          + E G   + +
Sbjct: 372 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 431

Query: 602 IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
              +  ++    G  K EN           +F +M    ++P+   ++A+++ C +    
Sbjct: 432 --TYSTMI---DGYCKSENVAEA-----FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 481

Query: 662 EDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALS-LFDEVKLMDSSTASAFYNALT 720
           E A  L  E+           + L+ GY  +  +Q  S LF E+           Y  + 
Sbjct: 482 EKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 541

Query: 721 DMLWHF--GQKRGAQLVVLEGKRRQV 744
           D  WH   G+   A L+  E + R +
Sbjct: 542 D--WHCKAGKMEEANLLFKEMQERNL 565



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 137/517 (26%), Positives = 241/517 (46%), Gaps = 65/517 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+IS L + GK++ A          G       F A I  Y ++G   EA   F+ M  
Sbjct: 224 NAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLD 283

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           + L PN   Y  +I+   K G +    + IF  +   GV PD  T ++ +    + G  +
Sbjct: 284 HGLMPNNPLYTVLINGHFKAG-NLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ 342

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +F+E+  +G+  D+FTY++L+   CK  +++ AFE+  EM  K I+PN+  Y+ ++
Sbjct: 343 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 402

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  K+G +  A  +F  M   G+  D V+Y+T++  Y K     EA  +  EM S G++
Sbjct: 403 DGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ 462

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             +  YNAL+ G  K+G  ++   +F +M     +   L+++TLID Y K    +EA Q+
Sbjct: 463 PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQEASQL 521

Query: 497 FREFKQAGLKADVVLYSALIDALCKNG-----------------LVESAVSLLDEMTKEG 539
           F+E     +  D V Y+ +ID  CK G                 +V++  +L ++M  +G
Sbjct: 522 FQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKG 581

Query: 540 IRPNVVTY----------NSIIDAF-------GRSATTECTVDDVERDLGKQKESANLDA 582
           ++P+ VTY          +++++AF       G+   T+ T+ D+            + A
Sbjct: 582 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLL-----------ITA 630

Query: 583 MCSQDDKDVQEAGRTDNQI--------IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
           +C ++  D+ EA +  +++        +     LV      GK +   R        VF+
Sbjct: 631 LCKRE--DLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATR--------VFE 680

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            +  L + P+  T   ++N        EDA  L+++L
Sbjct: 681 GVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 241/517 (46%), Gaps = 34/517 (6%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           AMI+ L     + LA  + E     G    V  +S LI  Y   G  +EA  + + M   
Sbjct: 155 AMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCS 214

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            + P++  YNA+I    K G   +       ++   G++PD +TF + +   S+ G    
Sbjct: 215 GVAPDIFCYNAIISCLSKAG-KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 273

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A   F+EM+  G+  +   Y  L++   K   +  A  I   + A  + P+V T S  I 
Sbjct: 274 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIH 333

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K GR+ +AL +FSE+K  G+  D  +Y++++S + K G  E+A  +  EM   GI  
Sbjct: 334 GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 393

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +   YNAL+ G  K G     R++F+ M    + P+ +TYST+ID Y K     EA  +F
Sbjct: 394 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 453

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E    G++    +Y+AL+   CK G +E A++L  EM ++G     +++N++ID + +S
Sbjct: 454 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKS 512

Query: 558 ATTECTVDDVERDLGKQ------KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
              +      +  + KQ        +  +D  C        +AG+              E
Sbjct: 513 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC--------KAGKM-------------E 551

Query: 612 KAGQGKKENRCRQEIL-CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
           +A    KE + R  I+  +  +F+KM    +KP+ VT+  ++ A  + ++  +A  L +E
Sbjct: 552 EANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE 611

Query: 671 LRLFDNQVYGVAHGLL---MGYRDNIWVQALSLFDEV 704
           +        G  H LL   +  R+++  +A  L DE+
Sbjct: 612 VVGKGMLTKGTIHDLLITALCKREDL-TEASKLLDEM 647



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 194/451 (43%), Gaps = 43/451 (9%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G+ P+  T+  + A   R      A+  F EM   G+  D    + L+D   +   
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D    I   M +  I  N++TY+ +I G  K G+++ A  +   M  LG   +  ++  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++  Y +      AL +  EME   +   AV+Y A++ G           ++ E+M    
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + PN++ YSTLI  Y+  G  +EA ++      +G+  D+  Y+A+I  L K G +E A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
           + L E+   G++P+ VT+ + I  + ++              GK  E+A         D+
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKT--------------GKMTEAAK------YFDE 280

Query: 590 DVQEAGRTDNQIIKVF--GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
            +      +N +  V   G     KAG           ++  L +F+ +H L + P+V T
Sbjct: 281 MLDHGLMPNNPLYTVLINGHF---KAGN----------LMEALSIFRHLHALGVLPDVQT 327

Query: 648 FSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWVQ-ALSLFD 702
            SA ++   +    ++A  +  EL+    + D   Y     L+ G+     V+ A  L D
Sbjct: 328 CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS---SLISGFCKQGEVEKAFELHD 384

Query: 703 EVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           E+ L   +     YNAL D L   G  + A+
Sbjct: 385 EMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 415


>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
 gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
 gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
 gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 141/543 (25%), Positives = 255/543 (46%), Gaps = 54/543 (9%)

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   D  TY T++  + +  Q     +++ EM      PN VTY+ +I  Y +A  L++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           +N+F++M+  G   DRV+Y T++ I+AK G  + A+ + + M++ G+  D  TY+ ++  
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            GK G      ++F +M     +PNL+TY+ ++D+++K   Y+ A++++R+ + AG + D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            V YS +++ L   G +E A ++  EM ++   P+   Y  ++D +G++   E       
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE------- 591

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
                Q   A L A        ++    T N ++  F  L   K  +  +          
Sbjct: 592 --KAWQWYQAMLHA-------GLRPNVPTCNSLLSTF--LRVNKIAEAYE---------- 630

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
              + Q M  L ++P++ T++ +L+ C+   S  D     + +    +     AH  L+ 
Sbjct: 631 ---LLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHP----AHMFLLK 683

Query: 689 YR------DNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
                   +N+   A +  D +   D  +     +A+ D L   GQK  A  V     ++
Sbjct: 684 MPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQK 743

Query: 743 QVWENVWSE-SC----LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGK 797
            V+ +   E SC    ++LH+MS G A   +   L      +      P  + I+TGWG+
Sbjct: 744 NVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGR 803

Query: 798 HSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDD 857
            S+V G   +R+AVE LL   G+PF+  + N G F+ +G  +  WL +S        H +
Sbjct: 804 RSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVGSGEPLNRWLLQS--------HVE 855

Query: 858 RTH 860
           R H
Sbjct: 856 RMH 858



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 166/327 (50%), Gaps = 10/327 (3%)

Query: 247 AISVFNSMKRY-NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A+  F  +KR    K +  TY  ++   G+    F  + ++ D+M+R+G QP+ +T+N L
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK-QFGAINKLLDEMVRDGCQPNTVTYNRL 405

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    R      A N+FN+M   G   D  TY TL+D   K   +D+A ++   M A  +
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           SP+  TYS +I+   KAG L  A  +F EM   G   + V+YN ++ ++AK   ++ AL 
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + ++M+++G   D VTY+ ++   G  G  +E   +F +M+     P+   Y  L+D++ 
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G  ++A Q ++    AGL+ +V   ++L+    +   +  A  LL  M   G+RP++ 
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 645

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLG 572
           TY  ++          CT    + D+G
Sbjct: 646 TYTLLLSC--------CTDGRSKLDMG 664



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 150/309 (48%), Gaps = 1/309 (0%)

Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
           F + +KR+      G   + M+  LGR  +      + +  + +G       ++ LI +Y
Sbjct: 350 FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSY 409

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
           GR+ Y  EA++VFN M+    KP+ VTY  +ID   K G      ++++  M   G+ PD
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF-LDIAMDMYQRMQAGGLSPD 468

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
             T++ ++    + G   AA  LF EMV +G   ++ TYN ++D   K      A ++  
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
           +M      P+ VTYS +++     G L++A  +F+EM+      D   Y  ++ ++ K G
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
             E+A    + M  +G+R +  T N+LL  + +  K  E   + + M A  + P+L TY+
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648

Query: 479 TLIDVYSKG 487
            L+   + G
Sbjct: 649 LLLSCCTDG 657



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/317 (19%), Positives = 129/317 (40%), Gaps = 38/317 (11%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           S + V ++ + L RF       + +++ G+R DA   N +L    +   Y      F  +
Sbjct: 298 SGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWL 354

Query: 466 KADCVSPNLL----TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           K     P       TY+T++    +   +    ++  E  + G + + V Y+ LI +  +
Sbjct: 355 KRQ---PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGR 411

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
              +  A+++ ++M + G +P+ VTY ++ID   ++        D+  D+ ++ ++  L 
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL-----DIAMDMYQRMQAGGLS 466

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC-----------IL 630
                    +   G+  +  +    +L  E   QG   N     I+             L
Sbjct: 467 PDTFTYSVIINCLGKAGH--LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLL 686
            +++ M     +P+ VT+S ++     C   E+A  +  E++    + D  VYG+    L
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD-L 583

Query: 687 MGYRDNI-----WVQAL 698
            G   N+     W QA+
Sbjct: 584 WGKAGNVEKAWQWYQAM 600


>gi|302806226|ref|XP_002984863.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
 gi|300147449|gb|EFJ14113.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
          Length = 564

 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/521 (24%), Positives = 243/521 (46%), Gaps = 38/521 (7%)

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   D+ TY T+L  + +    D+   ++ EM  +   PNVVTY+ +I  Y +A  LD +
Sbjct: 62  GFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSS 121

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           L +F+ M+ +G   DRV+Y T++ + AK G  + A+ + ++M+ +G R D  TY+ ++  
Sbjct: 122 LKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHC 181

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            GK GK +   ++F +M     +P+L+TY+ +ID+++K G +  A++++ + ++ G   D
Sbjct: 182 LGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPD 241

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            V Y  +++ L   G +E A  + +EM + G   +   +  ++D +G++   E       
Sbjct: 242 RVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFN 301

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
           R L                D  +Q      N ++  + +     A               
Sbjct: 302 RML----------------DSGLQPNVPACNSLLSAYLRSSFYDAAG------------- 332

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
             GV   M K  + P + T++++L++C+ C +  +   L   +    +  +     LL  
Sbjct: 333 --GVLGGMAKWGLYPTLQTYTSLLSSCAACRAAWEYDALFGLMGGTGHPAHPFVCSLLA- 389

Query: 689 YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENV 748
               + V     FD ++  +  +   F ++L D L   G+   A  V      + ++ N 
Sbjct: 390 -SGEMVVGIRCFFDAMQFEELESRRGFADSLIDFLHRAGKAVAAGSVWEVAAEKNLYPNA 448

Query: 749 WSESC-----LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVG 803
             E       ++LH+MS+G A   +   L      V      P  + I+TGWG+ S+V G
Sbjct: 449 VREKAPQYWSINLHVMSTGTALVALARTLAMFAEAVVRTGAAPYRIDIITGWGRRSRVPG 508

Query: 804 DGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLR 844
              +++AVE +L  + +PF +   N+G F+  GP +A WL+
Sbjct: 509 ASLVKQAVEGMLRSLNSPFHLDGLNVGCFVGQGPALAEWLK 549



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 176/323 (54%), Gaps = 4/323 (1%)

Query: 202 ILGRLGKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           IL +  +  +A N F  A  + G+ + V+ ++ ++   GR+       ++ + M R   +
Sbjct: 40  ILKQQKEAGVAYNFFIWARKQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCE 99

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           PN+VTYN +I   G+   D    +++F+ M   G +PDR+T+ +L+ + ++ G  +AA +
Sbjct: 100 PNVVTYNRLIHCYGRAN-DLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMD 158

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L+ +M H G   D FTY+ ++  + K  +++ A+++  EM  +  +P++VTY+ +ID +A
Sbjct: 159 LYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHA 218

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           KAG+ D AL ++S+++ +G   DRV+Y  ++ +    G  E+A  V +EME +G   D  
Sbjct: 219 KAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNP 278

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
            +  ++  +GK G  ++  + F +M    + PN+   ++L+  Y +   Y  A  +    
Sbjct: 279 IFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGM 338

Query: 501 KQAGLKADVVLYSALID--ALCK 521
            + GL   +  Y++L+   A C+
Sbjct: 339 AKWGLYPTLQTYTSLLSSCAACR 361



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 158/300 (52%), Gaps = 3/300 (1%)

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           K+   K ++ TY  ++   G+    F  +  + D+M+R G +P+ +T+N L+    R   
Sbjct: 59  KQAGFKHDVHTYTTILGILGRAK-SFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRAND 117

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +++  LFN M   G + D  TY TL+D   K    D A ++  +M      P+  TYS 
Sbjct: 118 LDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSI 177

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I    KAG+L+ A  +F EM   G     V+YN ++ ++AK G+F+ AL +  +++  G
Sbjct: 178 IIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVG 237

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEA 493
              D VTY  ++   G  G  ++  ++FE+M +A  V+ N + +  ++D++ K G  ++A
Sbjct: 238 YAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPI-FGLMVDMWGKTGNAEKA 296

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            Q F     +GL+ +V   ++L+ A  ++   ++A  +L  M K G+ P + TY S++ +
Sbjct: 297 AQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSS 356



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 138/265 (52%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G + D  T+ ++L +  R   ++   NL +EM+  G + ++ TYN L+    +   +D +
Sbjct: 62  GFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSS 121

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
            ++   M      P+ VTY T+ID  AKAG  D A++++ +M+  G   D  +Y+ ++  
Sbjct: 122 LKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHC 181

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
             K G+   A  +  EM   G     VTYN ++  + K GK+D   +++  ++    +P+
Sbjct: 182 LGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPD 241

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +TY  +++V    G  ++A Q+F E ++AG  AD  ++  ++D   K G  E A    +
Sbjct: 242 RVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFN 301

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSA 558
            M   G++PNV   NS++ A+ RS+
Sbjct: 302 RMLDSGLQPNVPACNSLLSAYLRSS 326



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 151/316 (47%), Gaps = 2/316 (0%)

Query: 166 LGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYG 225
           L  + E   A   F +A K+   K+D     + ++ ILGR    D+  N+ +  + EG  
Sbjct: 41  LKQQKEAGVAYNFFIWARKQAGFKHDV-HTYTTILGILGRAKSFDVLNNLLDEMIREGCE 99

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
             V  ++ LI  YGR+     ++ +FN M+    +P+ VTY  +ID   K G      ++
Sbjct: 100 PNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFH-DAAMD 158

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           ++  M   G +PD  T++ ++    + G   AA  LF EM  RG    + TYN ++D   
Sbjct: 159 LYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHA 218

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  + D+A ++ +++     +P+ VTY  +++     G ++DA  +F EM+  G   D  
Sbjct: 219 KAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNP 278

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            +  ++ ++ K G  E+A      M  SG++ +    N+LL  Y +   YD    +   M
Sbjct: 279 IFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGM 338

Query: 466 KADCVSPNLLTYSTLI 481
               + P L TY++L+
Sbjct: 339 AKWGLYPTLQTYTSLL 354



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 35/255 (13%)

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           + +G + D  TY  +LG  G+   +D +  + ++M  +   PN++TY+ LI  Y +    
Sbjct: 59  KQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDL 118

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             ++++F   +  G + D V Y  LID   K G  ++A+ L  +M   G RP+  TY+ I
Sbjct: 119 DSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSII 178

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
           I   G++                 K +A     C   D+    +  T N II +      
Sbjct: 179 IHCLGKAG----------------KLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHA---- 218

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
            KAG+              L ++  + ++   P+ VT+  I+     C   EDA  + EE
Sbjct: 219 -KAGKFDMA----------LKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEE 267

Query: 671 LR----LFDNQVYGV 681
           +     + DN ++G+
Sbjct: 268 MERAGWVADNPIFGL 282



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 91/184 (49%), Gaps = 1/184 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  LG+ GK++ A  +F    + GY  ++  ++ +I  + ++G    A+ +++ ++ 
Sbjct: 176 SIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQE 235

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+ VTY  +++  G  G   +   ++F++M R G   D   F  ++ +  + G  E
Sbjct: 236 VGYAPDRVTYGIIMEVLGNCG-HIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAE 294

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A   FN M+  G+  ++   N+LL A  + +  D A  ++  M    + P + TY++++
Sbjct: 295 KAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLL 354

Query: 377 DGYA 380
              A
Sbjct: 355 SSCA 358



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 7/212 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  ++  LGN G    A Q F   ++R     D   +   M+ + G+ G  + A   F  
Sbjct: 245 YGIIMEVLGNCGHIEDAEQVFE-EMERAGWVADN-PIFGLMVDMWGKTGNAEKAAQWFNR 302

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L+ G    V A ++L+SAY RS +   A  V   M ++ L P L TY +++ +C     
Sbjct: 303 MLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSSCAACRA 362

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            +++   +F  M   G  P      SLLA    G +    R  F+ M    ++      +
Sbjct: 363 AWEYDA-LFGLMGGTG-HPAHPFVCSLLA---SGEMVVGIRCFFDAMQFEELESRRGFAD 417

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           +L+D + +  +   A  +      KN+ PN V
Sbjct: 418 SLIDFLHRAGKAVAAGSVWEVAAEKNLYPNAV 449


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 215/400 (53%), Gaps = 11/400 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +  L+  L   G++ +A++ F   V R  + +      + +I+ L ++G+   A  +F  
Sbjct: 195 FNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHT--YTTIINGLCKIGETVAAAGLFRK 252

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G    V  +S +I +  +     EA+ +F+ MK   + PN+ TYN++I    +G  
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLI----QGLC 308

Query: 279 DF---KHVVEIFDDMLRNGVQPDRITFNSLLAV-CSRGGLWEAARNLFNEMVHRGIDQDI 334
           +F   +    + ++M+   + P+ +TF+ L+ + C  G ++EA R +   M   G++ ++
Sbjct: 309 NFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEA-RGVLKTMTEMGVEPNV 367

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TY++L++     A++  A ++   M  K   P+V +Y+ +I+GY KA R+ +A  +F+E
Sbjct: 368 VTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNE 427

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G+  D VSYNT++    +LGR  EA  + K M ++G   D  TY+ LL G+ KQG 
Sbjct: 428 MIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGY 487

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
             +  R+F  M++  + PN++ Y+ LID   K    KEA ++F E    GL+ +V +Y+ 
Sbjct: 488 LAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTT 547

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +I+ LCK GL++ A+     M ++G  PN  +YN II  F
Sbjct: 548 IINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGF 587



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 179/336 (53%), Gaps = 1/336 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G     Y    LI+ + +        SV   + +  L+  +VT+N +I+   K G  F  
Sbjct: 152 GLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVG-KFGQ 210

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            VE+FDDM+  G QPD  T+ +++    + G   AA  LF +M   G   D+ TY+T++D
Sbjct: 211 AVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIID 270

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           ++CK  +++ A +I + M AK ISPN+ TY+++I G     R  +A  M +EM  L I  
Sbjct: 271 SLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP 330

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           + V+++ +++I+ K G   EA  V K M   G+  + VTY++L+ GY  Q +  E R++F
Sbjct: 331 NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLF 390

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           + M      P++ +Y+ LI+ Y K     EA Q+F E    GL  D+V Y+ LID LC+ 
Sbjct: 391 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 450

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           G +  A  L   M   G  P++ TY+ ++D F +  
Sbjct: 451 GRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQG 486



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 192/359 (53%), Gaps = 1/359 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+   +L +VDL  ++    +  G   T+  F+ LI+   + G   +A+ +F+ M    
Sbjct: 163 LINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG 222

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +P++ TY  +I+   K G +      +F  M   G QPD +T+++++    +      A
Sbjct: 223 YQPDVHTYTTIINGLCKIG-ETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            ++F+ M  +GI  +IFTYN+L+  +C  ++   A  ++ EM + NI PN+VT+S +I+ 
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           + K G + +A  +   M  +G+  + V+Y+++++ Y+      EA  +   M + G + D
Sbjct: 342 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPD 401

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
             +YN L+ GY K  +  E +++F +M    ++P++++Y+TLID   + G  +EA  +F+
Sbjct: 402 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 461

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
                G   D+  YS L+D  CK G +  A  L   M    ++PN+V YN +IDA  +S
Sbjct: 462 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 520



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 191/352 (54%), Gaps = 5/352 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L +  +V+ A +IF     +G    ++ +++LI         +EA ++ N M  
Sbjct: 266 STIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMS 325

Query: 257 YNLKPNLVTYNAVIDA-CGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
            N+ PN+VT++ +I+  C +G V + + V++   +M   GV+P+ +T++SL+   S    
Sbjct: 326 LNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEM---GVEPNVVTYSSLMNGYSLQAE 382

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              AR LF+ M+ +G   D+F+YN L++  CK  ++  A ++  EM  + ++P++V+Y+T
Sbjct: 383 VVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNT 442

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDG  + GRL +A ++F  M   G   D  +Y+ +L  + K G   +A  + + M+S+ 
Sbjct: 443 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 502

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++ + V YN L+    K     E R++F ++    + PN+  Y+T+I+   K GL  EA+
Sbjct: 503 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEAL 562

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
           + FR  ++ G   +   Y+ +I    ++     AV L+ EM ++G   +V T
Sbjct: 563 EAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 227/509 (44%), Gaps = 77/509 (15%)

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           F+ ML    +P  I FN LL A+       +A  +L  +M   G+  D +T + L++   
Sbjct: 109 FNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFF 168

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           +  ++DL F ++A++    +   +VT++T+I+G  K G+   A+ +F +M   G   D  
Sbjct: 169 QLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVH 228

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y T+++   K+G    A  + ++M  +G + D VTY+ ++    K  + +E   +F  M
Sbjct: 229 TYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYM 288

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           KA  +SPN+ TY++LI        ++EA  +  E     +  ++V +S LI+  CK G V
Sbjct: 289 KAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNV 348

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA-------------TTECTVDDVE---- 568
             A  +L  MT+ G+ PNVVTY+S+++ +   A             T  C  D       
Sbjct: 349 FEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNIL 408

Query: 569 -------RDLGKQKESAN-----------------LDAMCSQDDKDVQEAGRTDNQIIKV 604
                  + +G+ K+  N                 +D +C        + GR     ++ 
Sbjct: 409 INGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLC--------QLGR-----LRE 455

Query: 605 FGQLVAEKAGQGKKENRCRQEIL----CILG-------VFQKMHKLKIKPNVVTFSAILN 653
              L       G   + C   IL    C  G       +F+ M    +KPN+V ++ +++
Sbjct: 456 AHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILID 515

Query: 654 ACSRCNSFEDASMLLEELRLF----DNQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMD 708
           A  +  + ++A  L  EL +     + Q+Y  + +GL    ++ +  +AL  F  ++  D
Sbjct: 516 AMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLC---KEGLLDEALEAFRNME-ED 571

Query: 709 SSTASAF-YNALT-DMLWHFGQKRGAQLV 735
               + F YN +    L H  + R  QL+
Sbjct: 572 GCPPNEFSYNVIIRGFLQHKDESRAVQLI 600



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 29/300 (9%)

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY-DEVRRMFEQMKADCVSPNLLTYST 479
           ++AL     M     R   + +N LL    K   Y D V  + +QM+   +SP+  T   
Sbjct: 103 DDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHM 162

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LI+ + +         +  +  + GL+  +V ++ LI+ LCK G    AV L D+M   G
Sbjct: 163 LINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG 222

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKE----SANLDAMCSQDDKDVQE 593
            +P+V TY +II+   +   T        +  + G Q +    S  +D++C   D+ V E
Sbjct: 223 YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCK--DRRVNE 280

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL-------GVFQKMHKLKIKPNVV 646
           A       + +F  + A+             + LC          +  +M  L I PN+V
Sbjct: 281 A-------LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV 333

Query: 647 TFSAILNA-CSRCNSFEDASML--LEELRLFDNQVYGVAHGLLMGYRDNI-WVQALSLFD 702
           TFS ++N  C   N FE   +L  + E+ +  N V      L+ GY      V+A  LFD
Sbjct: 334 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVV--TYSSLMNGYSLQAEVVEARKLFD 391


>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
 gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/537 (27%), Positives = 262/537 (48%), Gaps = 18/537 (3%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           ++  L++E+  +G    +I  F + +K +     +  + + MI +  R    D A+ +F 
Sbjct: 101 NFPLLIKEITQKGSIEHSILVFRW-MKNQRNYCARTDIYNMMIRLHARHNWTDQARGLFF 159

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                         +ALI+A+GRSG  + A+++   M +  + P+  TYN +I+ACG  G
Sbjct: 160 EMQKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSG 219

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            +++  +++   M  NGV PD +T N +L+    G  +  A + F  M    I  D  T 
Sbjct: 220 -NWREALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTL 278

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNIS--PNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           N ++  + K  Q + A  I   M  K     P+VVT++++I  Y+  G++++   +FS M
Sbjct: 279 NIIIYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTM 338

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G+  + VSYNT++  YA  G  +EAL V   +++SG+R D V+Y +LL  YG+  + 
Sbjct: 339 VAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQP 398

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            + R +FE MK D + PN+++Y+ +ID Y   GL  EA+++ RE +Q G+  + V    L
Sbjct: 399 KKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSICTL 458

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           + A  +     +   +L    +  I+ N + YNS I ++      E     + R + K K
Sbjct: 459 LAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFE-KATSMYRSMRKSK 517

Query: 576 ---ESANLDAMCSQDDKDVQ--EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
              ++     + S   K  +  EA    ++++ +   +  E    GK        I    
Sbjct: 518 VIPDAVTFTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYSSGK--------ITEAE 569

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM 687
            +F KM      P+VVT++ +L+A +    ++ A  LL+E+  ++ Q   +A   LM
Sbjct: 570 SMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPDTIACSALM 626



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 194/401 (48%), Gaps = 15/401 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +  +L       +++KA+  F   +K    + D   L + +I  L +LG+ + A  IF++
Sbjct: 243 HNIILSAYKTGAQYAKALSYFEL-MKGTNIRPDTTTL-NIIIYCLTKLGQYEKAIGIFKS 300

Query: 219 ALNEGYGNT---VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
            + E        V  F+++I  Y  +G  +   +VF++M    LKPN+V+YN ++ A   
Sbjct: 301 -MREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYAS 359

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            G++ K  + +F+ +  +G++PD +++ SLL    R    + AR +F  M    +  +I 
Sbjct: 360 HGMN-KEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIV 418

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           +YN ++DA      +  A E++ EM    I PN V+  T++    +  R  +   +    
Sbjct: 419 SYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSICTLLAACGRCSRKVNIDVVLQAA 478

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           +   I L+ ++YN+ +  Y  +G FE+A  + + M  S +  DAVT+  L+ G  K  KY
Sbjct: 479 ERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFTVLISGCCKMTKY 538

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            E      +M         L      + YS G +  EA  +F + K AG   DVV Y+ +
Sbjct: 539 CEALEFLSEMMD-------LKIPMTKEAYSSGKI-TEAESMFNKMKMAGCSPDVVTYTMM 590

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           + A       + A +LL EM +  I+P+ +  ++++ AF +
Sbjct: 591 LHAYNAAEHWKKACALLQEMEEYNIQPDTIACSALMRAFNK 631



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 96/415 (23%), Positives = 181/415 (43%), Gaps = 63/415 (15%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A ++F    N G    V ++++L+++YGRS   ++A  VF  MKR  LKPN+V+YNA+ID
Sbjct: 366 ALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMID 425

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           A G  G+     VE+  +M ++G+ P+ ++  +LLA C R         +      R I 
Sbjct: 426 AYGSNGL-LAEAVEVLREMEQDGIYPNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIK 484

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK---------- 381
            +   YN+ + +     + + A  +   M    + P+ VT++ +I G  K          
Sbjct: 485 LNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFTVLISGCCKMTKYCEALEF 544

Query: 382 -----------------AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
                            +G++ +A +MF++MK  G   D V+Y  +L  Y     +++A 
Sbjct: 545 LSEMMDLKIPMTKEAYSSGKITEAESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKAC 604

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK------ADCVSPNLLTYS 478
            + +EME   I+ D +  +AL+  + K G   +V  + E M+      +D +   +++  
Sbjct: 605 ALLQEMEEYNIQPDTIACSALMRAFNKGGDPSKVLILAEFMREKEIPLSDAIFFEMVSAC 664

Query: 479 TLIDVY-----------------------------SKGGLYKEAMQIFREFKQAGLKADV 509
           +L+  +                              K G  +  M++F +   +G + + 
Sbjct: 665 SLLRDWRTTIELIKLMESSFSVVSIGLLNQLLHLLGKSGKIESMMKLFYKIIGSGAEINC 724

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
             YS L+  L   G     + +L+ M +  ++P+   Y  II    +S  T  ++
Sbjct: 725 NTYSILLKNLLAVGNWRKYIEVLEWMEEARVQPSNGMYFDIISFAQKSGATYSSI 779



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 147/340 (43%), Gaps = 40/340 (11%)

Query: 418 GRFEEALLVCKEMESS---GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
           G  E ++LV + M++      R D   YN ++  + +    D+ R +F +M+     P+ 
Sbjct: 113 GSIEHSILVFRWMKNQRNYCARTD--IYNMMIRLHARHNWTDQARGLFFEMQKWRCKPDA 170

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
            T + LI+ + + G ++ AM I  +  Q  +      Y+ LI+A   +G    A+ L  +
Sbjct: 171 ETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSGNWREALKLCKK 230

Query: 535 MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEA 594
           MT+ G+ P++VT+N I+ A+   A     +   E   G                 +++  
Sbjct: 231 MTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKG----------------TNIRPD 274

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK--PNVVTFSAIL 652
             T N II    +L     GQ +K           +G+F+ M + + +  P+VVTF++I+
Sbjct: 275 TTTLNIIIYCLTKL-----GQYEKA----------IGIFKSMREKRAECHPDVVTFTSII 319

Query: 653 NACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSS 710
           +  S     E+   +   +     +   V++  LMG      +  +ALS+F+ +K     
Sbjct: 320 HLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLR 379

Query: 711 TASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
                Y +L +      Q + A+ V    KR ++  N+ S
Sbjct: 380 PDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVS 419


>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 886

 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 251/529 (47%), Gaps = 46/529 (8%)

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   D  TY T++  + +  Q     +++ EM      PN VTY+ +I  Y +A  L++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           +N+F++M+  G   DRV+Y T++ I+AK G  + A+ + + M++ G+  D  TY+ ++  
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            GK G      ++F +M     +PNL+TY+ ++D+++K   Y+ A++++R+ + AG + D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            V YS +++ L   G +E A ++  EM ++   P+   Y  ++D +G++   E       
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE------- 591

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
                Q   A L A        ++    T N ++  F  L   K  +  +          
Sbjct: 592 --KAWQWYQAMLHA-------GLRPNVPTCNSLLSTF--LRVNKIAEAYE---------- 630

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
              + Q M  L ++P++ T++ +L+ C+   S  D     + +    +     AH  L+ 
Sbjct: 631 ---LLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHP----AHMFLLK 683

Query: 689 YR------DNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
                   +N+   A +  D +   D  +     +A+ D L   GQK  A  V     ++
Sbjct: 684 MPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQK 743

Query: 743 QVWENVWSE-SC----LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGK 797
            V+ +   E SC    ++LH+MS G A   +   L      +      P  + I+TGWG+
Sbjct: 744 NVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGR 803

Query: 798 HSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRES 846
            S+V G   +R+AVE LL   G+PF+  + N G F+ +G  +  WL +S
Sbjct: 804 RSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVGSGEPLNRWLLQS 852



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 166/327 (50%), Gaps = 10/327 (3%)

Query: 247 AISVFNSMKRY-NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A+  F  +KR    K +  TY  ++   G+    F  + ++ D+M+R+G QP+ +T+N L
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK-QFGAINKLLDEMVRDGCQPNTVTYNRL 405

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    R      A N+FN+M   G   D  TY TL+D   K   +D+A ++   M A  +
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           SP+  TYS +I+   KAG L  A  +F EM   G   + V+YN ++ ++AK   ++ AL 
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + ++M+++G   D VTY+ ++   G  G  +E   +F +M+     P+   Y  L+D++ 
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G  ++A Q ++    AGL+ +V   ++L+    +   +  A  LL  M   G+RP++ 
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 645

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLG 572
           TY  ++          CT    + D+G
Sbjct: 646 TYTLLLSC--------CTDGRSKLDMG 664



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 150/309 (48%), Gaps = 1/309 (0%)

Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
           F + +KR+      G   + M+  LGR  +      + +  + +G       ++ LI +Y
Sbjct: 350 FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSY 409

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
           GR+ Y  EA++VFN M+    KP+ VTY  +ID   K G      ++++  M   G+ PD
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF-LDIAMDMYQRMQAGGLSPD 468

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
             T++ ++    + G   AA  LF EMV +G   ++ TYN ++D   K      A ++  
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
           +M      P+ VTYS +++     G L++A  +F+EM+      D   Y  ++ ++ K G
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
             E+A    + M  +G+R +  T N+LL  + +  K  E   + + M A  + P+L TY+
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648

Query: 479 TLIDVYSKG 487
            L+   + G
Sbjct: 649 LLLSCCTDG 657



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/317 (19%), Positives = 129/317 (40%), Gaps = 38/317 (11%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           S + V ++ + L RF       + +++ G+R DA   N +L    +   Y      F  +
Sbjct: 298 SGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWL 354

Query: 466 KADCVSPNLL----TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           K     P       TY+T++    +   +    ++  E  + G + + V Y+ LI +  +
Sbjct: 355 KRQ---PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGR 411

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
              +  A+++ ++M + G +P+ VTY ++ID   ++        D+  D+ ++ ++  L 
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL-----DIAMDMYQRMQAGGLS 466

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC-----------IL 630
                    +   G+  +  +    +L  E   QG   N     I+             L
Sbjct: 467 PDTFTYSVIINCLGKAGH--LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLL 686
            +++ M     +P+ VT+S ++     C   E+A  +  E++    + D  VYG+    L
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD-L 583

Query: 687 MGYRDNI-----WVQAL 698
            G   N+     W QA+
Sbjct: 584 WGKAGNVEKAWQWYQAM 600


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 190/354 (53%), Gaps = 1/354 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +++    FE          V  ++ +I AY +     EA  +  SM    L+PNL+TY
Sbjct: 217 GNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTY 276

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N VI+   + G   +    +  +M R G  PD +T+N+L+    + G +  A  L +EM+
Sbjct: 277 NMVINGLCRVG-RIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEML 335

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G+  D+ TY +L++ +CK   ++ A E   +M  + + PN VTY+++I+G+++ G +D
Sbjct: 336 RNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMD 395

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A  ++ EM   G     V+YN +L+ +   GR EEA+ + + ME  G+  D V+Y+ ++
Sbjct: 396 EAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTII 455

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G+ +  + D   +M  +M    VSP+ +TYS+LI    +     EA  +F+E     L 
Sbjct: 456 AGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLL 515

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            D   Y++LI+  CK G +  A++L DEM K+G  P+ VTYN +I+   + A T
Sbjct: 516 PDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQART 569



 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 240/467 (51%), Gaps = 36/467 (7%)

Query: 209 VDLAKNIFETALNEGY---GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           VD   N F   L + Y    ++   F  ++ +     + ++A+++ +  K     P +++
Sbjct: 110 VDEKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLS 169

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNE 324
           YNA++D+  +         +++ +M+ +GV  +  ++N L+   C+ G L E     F E
Sbjct: 170 YNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNL-EMGLRFFEE 228

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M       ++ TYNT++ A CK  ++D AF+++  M  + + PN++TY+ +I+G  + GR
Sbjct: 229 MERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGR 288

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +++   + +EM   G   D V+YNT+++ Y K+G F +AL++  EM  +G+  D VTY +
Sbjct: 289 IEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTS 348

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+    K G  +     F+QM    + PN +TY++LI+ +S+ G   EA +I+ E  ++G
Sbjct: 349 LINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSG 408

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
               +V Y+AL++  C +G +E A+ LL  M  +G+ P+VV+Y++II  F       C  
Sbjct: 409 FPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGF-------CRY 461

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
            +++R                Q + ++ E G + + I   +  L+     QG  E R R 
Sbjct: 462 QELDRAF--------------QMNAEMVEKGVSPDAI--TYSSLI-----QGLCEQR-RL 499

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              C L  FQ+M    + P+  T+++++N   +     +A  L +E+
Sbjct: 500 NEACDL--FQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEM 544



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 192/382 (50%), Gaps = 17/382 (4%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++G    A  +    L  G    V  +++LI+   ++G    A+  F+ M    L+PN V
Sbjct: 320 KVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGV 379

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TY ++I+   + G        I+D+M+R+G  P  +T+N+LL      G  E A  L   
Sbjct: 380 TYTSLINGFSQKGF-MDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRG 438

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M  +G+  D+ +Y+T++   C+  ++D AF++ AEM  K +SP+ +TYS++I G  +  R
Sbjct: 439 MEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRR 498

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           L++A ++F EM    +  D  +Y ++++ Y K G   EAL +  EM   G   D VTYN 
Sbjct: 499 LNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNV 558

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS-----------KG----GL 489
           L+ G  KQ +  E +R+  ++  D   PN +TY TLI+  S           KG    GL
Sbjct: 559 LINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGL 618

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
             EA Q+F    +   K +  +Y+ +I   C++G V  A  L  EM   G  P+ VT  +
Sbjct: 619 MNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIA 678

Query: 550 IIDAFGRSATTECTVDDVERDL 571
           ++ A       E  ++ V RD+
Sbjct: 679 LVKALYSEGMDE-QLNLVIRDI 699



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 189/357 (52%), Gaps = 1/357 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    +L ++D A  +  +   EG    +  ++ +I+   R G  +E   V   M R
Sbjct: 242 NTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDR 301

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+ VTYN +++   K G +F   + +  +MLRNG+ PD +T+ SL+    + G   
Sbjct: 302 KGFAPDGVTYNTLVNGYCKVG-NFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLN 360

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A   F++M  RG+  +  TY +L++   +   MD A+ I  EM      P +VTY+ ++
Sbjct: 361 RAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALL 420

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G+  +GR+++A+ +   M+  G+  D VSY+T+++ + +    + A  +  EM   G+ 
Sbjct: 421 NGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVS 480

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            DA+TY++L+ G  +Q + +E   +F++M    + P+  TY++LI+ Y K G   EA+ +
Sbjct: 481 PDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNL 540

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             E  + G   D V Y+ LI+ L K      A  LL ++  +   PN +TY+++I++
Sbjct: 541 HDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIES 597



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 139/318 (43%), Gaps = 34/318 (10%)

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK-YDEVRRMFEQM 465
           ++ V+   + L   E+AL +    + +G     ++YNA+L    +  K      +++ +M
Sbjct: 135 FDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREM 194

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
            A  VS N+ +Y+ LI  +   G  +  ++ F E ++     +VV Y+ +I A CK   +
Sbjct: 195 IASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRI 254

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           + A  LL  M  EG+ PN++TYN +I+         C V  +E   G          +  
Sbjct: 255 DEAFKLLRSMGLEGLEPNLLTYNMVINGL-------CRVGRIEETSG---------VLAE 298

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
            D K     G T N ++  +      K G   +           L +  +M +  + P+V
Sbjct: 299 MDRKGFAPDGVTYNTLVNGYC-----KVGNFHQA----------LVLHSEMLRNGLPPDV 343

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH-GLLMGYRDNIWV-QALSLFDE 703
           VT+++++N   +  +   A    +++ +   +  GV +  L+ G+    ++ +A  ++DE
Sbjct: 344 VTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDE 403

Query: 704 VKLMDSSTASAFYNALTD 721
           +           YNAL +
Sbjct: 404 MIRSGFPPTIVTYNALLN 421


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 208/394 (52%), Gaps = 10/394 (2%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L   +I+ L +  +   A  +    L+E      + +  +I +  + G   + + +F  M
Sbjct: 46  LYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREM 105

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               + PN++ Y+++I+   + G   +  V +FD+M+  G++ + IT+NSL+    R GL
Sbjct: 106 INMGICPNVIVYSSLINGLCRVG-KLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGL 164

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           W+ A   F++MV  GI  D+ T+ TL+D + K  ++  A++I   M  +  +PN+VTY++
Sbjct: 165 WKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNS 224

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +++G     ++D A+ +F  M   GI +D +SYNT+++ Y   G+ EEA+ + ++M+   
Sbjct: 225 LLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEE 284

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +     TY  LL    + G+    + +F  M+    SP+L TY+ L+D   K G  +EA+
Sbjct: 285 LTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAI 344

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +FR  K    K  + +YS LI  + +    ESA+ + DE+   G+ PN+VTYN +I+  
Sbjct: 345 DVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGL 404

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
            +    E  + + ER   + +ES      C QD+
Sbjct: 405 CK----EGKLLEAERLFVQMEESG-----CEQDE 429



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 180/340 (52%), Gaps = 1/340 (0%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +F   +N G    V  +S+LI+   R G  +EA+++F+ M    +K N++TYN++I A  
Sbjct: 101 MFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASC 160

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           + G+ +K     F  M+  G+ PD +TF +L+   S+ G  + A  +F  M+ +G   +I
Sbjct: 161 RFGL-WKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNI 219

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TYN+LL+ +C   QMD A  +   M  + I  +V++Y+T+I+GY  +G+ ++A+ +F +
Sbjct: 220 VTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRK 279

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M++  +     +Y  +L    + GR   A  +   M+  G      TY  LL G  K G 
Sbjct: 280 MQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGC 339

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            +E   +F  +K+    P++  YS LI    +   ++ AM+IF E    GL  ++V Y+ 
Sbjct: 340 IEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNI 399

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +I+ LCK G +  A  L  +M + G   + +++N II  F
Sbjct: 400 MINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGF 439



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 187/348 (53%), Gaps = 3/348 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++I+ L R+GK+  A N+F+  +++G    V  +++LI A  R G  +EA   F+ M  
Sbjct: 118 SSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVG 177

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             + P++VT+  +ID   K G   +   +IF+ M++ G  P+ +T+NSLL  +C    + 
Sbjct: 178 EGILPDVVTFTTLIDHLSKKG-KVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMD 236

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            A R LF  MV RGI  D+ +YNTL++  C   + + A  +  +M  + ++P++ TY+ +
Sbjct: 237 HAVR-LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTIL 295

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +    + GR+  A  +F+ M+  G      +Y  +L    K G  EEA+ V + ++S   
Sbjct: 296 LKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKY 355

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           +     Y+ L+GG  +  +++    +F+++    + PN++TY+ +I+   K G   EA +
Sbjct: 356 KPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAER 415

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           +F + +++G + D + ++ +I    +   V+ A+  L  M ++   PN
Sbjct: 416 LFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPN 463



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 199/413 (48%), Gaps = 34/413 (8%)

Query: 260 KPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           +PNLVT + ++   C +G V     +E+FD M R+G Q D + +  L+    +      A
Sbjct: 6   QPNLVTVSTLVKGMCFEGKV--MDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L   M+      + FTY  ++D++CK        ++  EM    I PNV+ YS++I+G
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             + G+L +A+N+F EM   GI  + ++YN+++    + G ++EA     +M   GI  D
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VT+  L+    K+GK  E  ++FE M     +PN++TY++L++          A+++F 
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
              + G+K DV+ Y+ LI+  C +G  E A++L  +M  E + P++ TY  ++ A  ++ 
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNG 303

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
               T  ++  ++    +S +LD      D                           G  
Sbjct: 304 RIR-TAKELFNNMQICGQSPSLDTYTVLLD---------------------------GLC 335

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +N C +E    + VF+ +  +K KP++  +S ++    +   +E A  + +E+
Sbjct: 336 KNGCIEE---AIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEI 385



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 215/441 (48%), Gaps = 35/441 (7%)

Query: 291 LRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           +++G QP+ +T ++L+  +C  G + +A   LF++M   G   DI  Y  L++A+ K  Q
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALE-LFDKMTRSGFQGDILLYGYLINALRKTRQ 59

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              A E+   M ++  S N  TY  +ID   K G     L MF EM  +GI  + + Y++
Sbjct: 60  ARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSS 119

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +++   ++G+  EA+ +  EM S GI+ + +TYN+L+    + G + E  R F QM  + 
Sbjct: 120 LINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEG 179

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + P+++T++TLID  SK G  +EA +IF    + G   ++V Y++L++ LC +  ++ AV
Sbjct: 180 ILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAV 239

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            L + M + GI+ +V++YN++I+ +  S  TE                   +AM      
Sbjct: 240 RLFEVMVERGIKIDVISYNTLINGYCTSGKTE-------------------EAMTLFRKM 280

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
             +E   +    I  +  L+      G+   R  +E+      F  M      P++ T++
Sbjct: 281 QYEELTPS----ITTYTILLKALYQNGRI--RTAKEL------FNNMQICGQSPSLDTYT 328

Query: 650 AILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLM 707
            +L+   +    E+A  +   L+    +     + +L+G  ++   W  A+ +FDE+  +
Sbjct: 329 VLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTV 388

Query: 708 DSSTASAFYNALTDMLWHFGQ 728
                   YN + + L   G+
Sbjct: 389 GLVPNIVTYNIMINGLCKEGK 409


>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
 gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
          Length = 1354

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 205/398 (51%), Gaps = 5/398 (1%)

Query: 158 DYTFLLRELGNRGEWSKAIQCF-AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF 216
           D  ++++ + N   W +A++ +    V R    N   ++ + M+S+LGR  +  LA+ +F
Sbjct: 47  DLCYVVKRVANTS-WQRALELYECLNVARWYAPNP--RMLAVMLSVLGRANQPGLAQELF 103

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           + A     GN V  +++L+S Y R G       +   M+    +P+LVT+N VI A  +G
Sbjct: 104 DRA-ESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRG 162

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G+       +  D+   G++PD IT+N+L++ CS       A  +F EM  +G D DI+T
Sbjct: 163 GMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWT 222

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN ++    +  +++ A  I   M  +  +P+ VTY++++  +A+ GR+++   +   M+
Sbjct: 223 YNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMR 282

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
                 D ++YNT++ +Y K G   +A  +  +M+  G   D+VT+  L+   GK G  +
Sbjct: 283 DARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVN 342

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E   MFE M    V P L  +S +I  Y+K  ++ +A   +    +AG++ D++ YS ++
Sbjct: 343 EAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVML 402

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           D   K  + E  + L   M   G++P +  Y  ++  F
Sbjct: 403 DVFFKAEMPEKCIILYKAMVGSGLKPELSVYAIMVRVF 440



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 158/673 (23%), Positives = 282/673 (41%), Gaps = 83/673 (12%)

Query: 197  SAM-ISILGRLGKVDLAKN---IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
            SAM ++I+   GK+ L +N   +F      G+     A+SAL+SAY  +G  + A    +
Sbjct: 635  SAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALD 694

Query: 253  SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            +M    L+PN    N V++A G+ G   K + E +  +   G+ P+  TF  +    SR 
Sbjct: 695  NMVAAGLQPNAACANYVLEAFGRAG-KAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRN 753

Query: 313  GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            G  E AR+++ +M   G                                    SP++  +
Sbjct: 754  GNLEEARSMYRQMREAGF-----------------------------------SPSIQVF 778

Query: 373  STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
              ++  Y++     DA  +  ++K  G+ LD   YN ++S+Y+KLG + +A LV K M+ 
Sbjct: 779  KALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQE 838

Query: 433  SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             G   DA T+N L+  Y +     E + +  +M     +PN+ TY+TLI  Y +   Y++
Sbjct: 839  IGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYED 898

Query: 493  AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            A  +F+   + G K D   Y+ +I+   K G       ++++M  +G  P++ T + ++D
Sbjct: 899  AELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMD 958

Query: 553  AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
            ++G+   T           GK +E            + + E G + + I   +  ++   
Sbjct: 959  SYGKGGAT-----------GKAEEVL----------ETLPEIGMSPDAI--HYTSIINSH 995

Query: 613  AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                       ++ L  +   +KM    ++P  VT +  + A S C     A MLL+ L 
Sbjct: 996  LNN--------KDYLSAVIWLRKMTDACVRPTHVTITCFVGAASVCERSSHALMLLKAL- 1046

Query: 673  LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
                  + +   L+      +      +FD+++           N L D+LW F Q   A
Sbjct: 1047 --SEAGFSLPLRLMTECTPKVVQDMQDIFDQLQESGPEACQGVVNVLMDLLWAFRQCATA 1104

Query: 733  QLVVLEGKRRQVWENVWSES-----CLDLHLMSSGAARAMVHAWLLNIHSIVFEGHEL-P 786
             LV        ++  V +         D   +S GAA   +  WL  +     +G  + P
Sbjct: 1105 ALVFAVAIESNIYTQVLARVKDRNWGADFRRLSPGAALVALILWLDQMQDASLQGSPVPP 1164

Query: 787  KLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRES 846
            K + I  G    SK+    ++   ++  L  MG+PF  +    G  ++    +  WL+ES
Sbjct: 1165 KSIQIDIG---SSKLNNQASVSNTIKTHLWQMGSPFLPSKTRAGVLVAKSHALCMWLKES 1221

Query: 847  GTLKVLVLHDDRT 859
                 L L + +T
Sbjct: 1222 PYCLDLELKNTKT 1234



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 168/381 (44%), Gaps = 3/381 (0%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
            Y+ LL      G + +A +     V    + N     A+ ++   GR GK       ++ 
Sbjct: 673  YSALLSAYAETGNFERATRALDNMVAAGLQPN--AACANYVLEAFGRAGKAKELSEFYQR 730

Query: 219  ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                G       F  +  A+ R+G  +EA S++  M+     P++  + A++    +  V
Sbjct: 731  LPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETV 790

Query: 279  DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            +     E+  D+ + G++ D   +N ++++ S+ G +  A  +F  M   G   D  T+N
Sbjct: 791  EID-AEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFN 849

Query: 339  TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            TL+    +   +  A  ++ EM     +PN+ TY+T+I  Y +    +DA  +F  +   
Sbjct: 850  TLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAET 909

Query: 399  GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            G   D  +YN ++++Y K G   +   V ++M++ G      T + L+  YGK G   + 
Sbjct: 910  GCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKA 969

Query: 459  RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
              + E +    +SP+ + Y+++I+ +     Y  A+   R+   A ++   V  +  + A
Sbjct: 970  EEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACVRPTHVTITCFVGA 1029

Query: 519  LCKNGLVESAVSLLDEMTKEG 539
                     A+ LL  +++ G
Sbjct: 1030 ASVCERSSHALMLLKALSEAG 1050



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 162/714 (22%), Positives = 288/714 (40%), Gaps = 115/714 (16%)

Query: 119 TRHSVVAEEALHHVTAFARDD--VSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSK 174
           T  +V     LH   AFARD     +  I        C +D+ T+  ++   G  G   K
Sbjct: 252 TPDAVTYNSVLH---AFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRK 308

Query: 175 AIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSAL 234
           A + +   +K E R  D     + +I  LG+ G V+ A  +FE  L      T+ AFSA+
Sbjct: 309 AEELYV-QMKEEGRCPDSVTF-TVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAM 366

Query: 235 ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG 294
           I AY ++    +A   ++ M R  ++P+L+ Y+ ++D   K  +  K ++ ++  M+ +G
Sbjct: 367 ICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKCII-LYKAMVGSG 425

Query: 295 VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAF 354
           ++P+   +  ++ V  +        NL  EMV     Q   +   L   + KG     A 
Sbjct: 426 LKPELSVYAIMVRVFYQKSSLAEIENLSKEMV-----QSSASLAALSSTLAKGGFYAEAA 480

Query: 355 EIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY 414
            ++    A+ ++  V T + ++  +  +G+L DA ++   +  +   +    Y  +  + 
Sbjct: 481 VVLKISFAQGVAVKVETLNDVLGAFEASGKLSDARDLVHAVSSIEPSVAAHLYKRLALML 540

Query: 415 AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF-------EQMKA 467
           AK GRF EA    +  ++ G  + +     L+  Y + G  DE    F        +M A
Sbjct: 541 AKAGRFSEAEEEMRTSQTYGQAQVSDFLKVLVASYDRAGMQDEALARFLDMTTEGLEMDA 600

Query: 468 DCVSPNLLTY----------STLIDV------------------YSKGGLYKEAMQIFRE 499
           + +   ++ Y            LID                   Y K  L++ A  +FR+
Sbjct: 601 EVLQTAVMCYCRKGFAFVAHELLIDCLHAFEVKDSAMHVAIIASYGKLKLWQNAEIVFRD 660

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
            ++ G   +   YSAL+ A  + G  E A   LD M   G++PN    N +++AFGR+  
Sbjct: 661 LQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGK 720

Query: 560 TECTVDDVER--DLGKQKES-------------ANLDAMCSQDDKDVQEAGRTDNQIIKV 604
            +   +  +R  ++G    S              NL+   S   + ++EAG + +  I+V
Sbjct: 721 AKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSM-YRQMREAGFSPS--IQV 777

Query: 605 FGQLVA------------------EKAGQG-------------KKENRCRQEILCILGVF 633
           F  L+A                  +KAG                K    R+  L    VF
Sbjct: 778 FKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAAL----VF 833

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN----QVYGV---AHGLL 686
           + M ++   P+  TF+ ++   SR    ++A  LL E+    N      Y     A+G L
Sbjct: 834 KGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRL 893

Query: 687 MGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGK 740
             Y D     A  +F  +        +  YN + ++    G+ R  + V+ + K
Sbjct: 894 QAYED-----AELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMK 942



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 31/198 (15%)

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           +PN    + ++ V  +      A ++F +  ++ +   V +Y++L+    ++G   S   
Sbjct: 77  APNPRMLAVMLSVLGRANQPGLAQELF-DRAESSIGNCVQVYNSLMSVYARHGDWNSVQQ 135

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
           LL  M   G RP++VT+N +I A  R    E                     + S   +D
Sbjct: 136 LLCRMQDRGCRPDLVTFNIVIKARTRGGMQE--------------------GLASSLLQD 175

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
           V  AG   + I   +  L++  +      NR    IL    +F++M +    P++ T++A
Sbjct: 176 VYAAGLRPDTI--TYNTLISACS----LNNRLSDAIL----IFEEMQRQGCDPDIWTYNA 225

Query: 651 ILNACSRCNSFEDASMLL 668
           +++   R    E AS + 
Sbjct: 226 MISVYGRAGRVEAASSIF 243


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 195/358 (54%), Gaps = 4/358 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+ L R  +  +A ++    +  GY   V   S+LI+ + +     +AI + + M+   
Sbjct: 51  VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 110

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +P++V YN +ID   K G+     VE+FD M R+GV+ D +T+NSL+A     G W  A
Sbjct: 111 FRPDVVIYNTIIDGSCKIGL-VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 169

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L  +MV R I  ++ T+  ++D   K  +   A ++  EM  + + P+V TY+++I+G
Sbjct: 170 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 229

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
               GR+D+A  M   M   G   D V+YNT+++ + K  R +E   + +EM   G+  D
Sbjct: 230 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 289

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            +TYN ++ GY + G+ D  + +F +M +    PN+ TYS L+         ++A+ +F 
Sbjct: 290 TITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFE 346

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             +++ ++ D+  Y+ +I  +CK G VE A  L   ++ +G++P+VV+Y ++I  F R
Sbjct: 347 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 404



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 165/272 (60%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M+++   P  + F+ +L+  ++   ++   +LF+ M   GI  D+++YN +++ +C+ ++
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
             +A  ++ +M      P+VVT S++I+G+ +  R+ DA+++ S+M+ +G   D V YNT
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    K+G   +A+ +   ME  G+R DAVTYN+L+ G    G++ +  R+   M    
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + PN++T++ +IDV+ K G + EAM+++ E  +  +  DV  Y++LI+ LC +G V+ A 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +LD M  +G  P+VVTYN++I+ F +S   +
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 272



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 187/365 (51%), Gaps = 4/365 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++S + +    DL  ++F      G G+ +Y+++ +I+   R      A+SV   M +
Sbjct: 14  SKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMK 73

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           +  +P++VT +++I+   +G   F   +++   M   G +PD + +N+++    + GL  
Sbjct: 74  FGYEPDVVTVSSLINGFCQGNRVF-DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 132

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF+ M   G+  D  TYN+L+  +C   +   A  +M +M  ++I PNV+T++ +I
Sbjct: 133 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 192

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D + K G+  +A+ ++ EM    +  D  +YN++++     GR +EA  +   M + G  
Sbjct: 193 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 252

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTYN L+ G+ K  + DE  ++F +M    +  + +TY+T+I  Y + G    A +I
Sbjct: 253 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 312

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F        + ++  YS L+  LC N  VE A+ L + M K  I  ++ TYN +I    +
Sbjct: 313 FSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 369

Query: 557 SATTE 561
               E
Sbjct: 370 IGNVE 374



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 163/294 (55%), Gaps = 1/294 (0%)

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           P++V ++ V+    K   ++  V+ +F  M   G+  D  ++N ++    R   +  A +
Sbjct: 8   PSIVDFSKVLSKIAKSK-NYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 66

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           +  +M+  G + D+ T ++L++  C+G ++  A +++++M      P+VV Y+T+IDG  
Sbjct: 67  VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 126

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K G ++DA+ +F  M+  G+  D V+YN++++     GR+ +A  + ++M    I  + +
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 186

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           T+ A++  + K+GK+ E  +++E+M   CV P++ TY++LI+     G   EA Q+    
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 246

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
              G   DVV Y+ LI+  CK+  V+    L  EM + G+  + +TYN+II  +
Sbjct: 247 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 132/246 (53%), Gaps = 6/246 (2%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V  F+A+I  + + G   EA+ ++  M R  + P++ TYN++I+  C  G VD     ++
Sbjct: 185 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD--EAKQM 242

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
            D M+  G  PD +T+N+L+    +    +    LF EM  RG+  D  TYNT++    +
Sbjct: 243 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 302

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             + D A EI + M ++   PN+ TYS ++ G     R++ AL +F  M+   I LD  +
Sbjct: 303 AGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITT 359

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN V+    K+G  E+A  + + +   G++ D V+Y  ++ G+ ++ ++D+   ++ +M+
Sbjct: 360 YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 419

Query: 467 ADCVSP 472
            D + P
Sbjct: 420 EDGLLP 425



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 36/266 (13%)

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           V ++ +L    K   YD V  +F  M+   +  +L +Y+ +I+   +   +  A+ +  +
Sbjct: 11  VDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGK 70

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             + G + DVV  S+LI+  C+   V  A+ L+ +M + G RP+VV YN+IID   +   
Sbjct: 71  MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 130

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
               V+  +R    +++    DA+                     +  LVA     G+  
Sbjct: 131 VNDAVELFDR---MERDGVRADAV--------------------TYNSLVAGLCCSGRWS 167

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL--RLFDNQ 677
           +  R        + + M    I PNV+TF+A+++   +   F +A  L EE+  R  D  
Sbjct: 168 DAAR--------LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 219

Query: 678 VY---GVAHGLLMGYRDNIWVQALSL 700
           V+    + +GL M  R +   Q L L
Sbjct: 220 VFTYNSLINGLCMHGRVDEAKQMLDL 245


>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Cucumis sativus]
          Length = 707

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 156/617 (25%), Positives = 291/617 (47%), Gaps = 57/617 (9%)

Query: 203 LGRLGKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
           L ++G ++    +F+   N+  Y      ++ +I  + R     +A  +F  M+++  KP
Sbjct: 4   LTQIGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKWRCKP 63

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           ++ TYNA+I+A G+ G  ++    I +DMLR  + P R TFN+L+  C   G W  A  +
Sbjct: 64  DVETYNALINAHGRAG-QWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRV 122

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             +M   G+  D+ T+N +L A   GAQ   A      M   NI P+  T + +I    K
Sbjct: 123 CKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIK 182

Query: 382 AGRLDDALNMFSEM--KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
             +   A+ +FS M  K      D V++ +++ +Y+  G+ E+   V   M + GI+ + 
Sbjct: 183 VKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNI 242

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           V+YNAL+  Y   G   E   +F++MK     P++++Y++LI  + +      A ++F  
Sbjct: 243 VSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDM 302

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
            K+   K ++V Y+AL+DA   NG +  AV +L EM ++GI PNVV+  +++ A GR   
Sbjct: 303 MKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFG- 361

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDD-KDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
                           +  N+D++ S  + + +       N  I  +  +     G+ +K
Sbjct: 362 ----------------QKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNI-----GEYEK 400

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE---LRL-F 674
                      + +++ M     KP+ VTF+ +++ C R + +E+A    +E   LR+  
Sbjct: 401 A----------INLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPL 450

Query: 675 DNQVYGVAHGLLMGY-RDNIWVQALSLFDEVK----LMDSSTASAFYNALT-DMLWHFGQ 728
            +++Y     ++  Y +    V+A SLF+ +K      D  T +A  NA +   +W   +
Sbjct: 451 SSEIYS---SMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMW---E 504

Query: 729 KRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKL 788
           K  A    +E    Q+ +++   + +      + A+  ++ A ++    I F      ++
Sbjct: 505 KVCALYQEMEANNIQL-DSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEM 563

Query: 789 L---SILTGWGKHSKVV 802
           L   SIL  W K + ++
Sbjct: 564 LSACSILRDWRKATDLI 580



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 195/384 (50%), Gaps = 3/384 (0%)

Query: 171 EWSKAIQCFA-FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
           ++ +AI+ F+    KR E + D     S +I +    G+++  K +F T L EG    + 
Sbjct: 185 QYGQAIEIFSSMREKRSECRPDVVTFTS-IIHLYSVRGQIEDCKAVFSTMLAEGIKPNIV 243

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           +++ALISAY   G  +EA SVF+ MKR    P++V+Y ++I   G+     +   E+FD 
Sbjct: 244 SYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPAR-AREVFDM 302

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M RN  +P+ +++N+L+      G    A ++  EM   GI  ++ +  TLL A  +  Q
Sbjct: 303 MKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQ 362

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
                 +++    + I  N +  ++ I  Y   G  + A+N++  M+      D V++  
Sbjct: 363 KVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTI 422

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++S   ++ ++EEAL   KEM    I   +  Y++++  Y KQG+  +   +F  +K   
Sbjct: 423 LISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSG 482

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P+L+TY+ +I+ YS   ++++   +++E +   ++ D +  SAL+ A  K     + +
Sbjct: 483 CCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQLDSIACSALMKAFNKGNQASNVL 542

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDA 553
            L + M ++GI  N   +  ++ A
Sbjct: 543 ILAEIMKEKGIPFNDANFFEMLSA 566



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 116/493 (23%), Positives = 221/493 (44%), Gaps = 34/493 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+  GR G+   A NI E  L      +   F+ LI+A G  G  +EA+ V   M  
Sbjct: 69  NALINAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTD 128

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P+LVT+N V+ A  K G  +   +  F+ M    ++PD  T N ++    +   + 
Sbjct: 129 NGVGPDLVTHNIVLSA-YKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYG 187

Query: 317 AARNLFNEMVHRGID--QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            A  +F+ M  +  +   D+ T+ +++       Q++    + + M A+ I PN+V+Y+ 
Sbjct: 188 QAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNA 247

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I  YA  G   +A ++F EMK  G   D VSY +++S + +  +   A  V   M+ + 
Sbjct: 248 LISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNK 307

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
            + + V+YNAL+  YG  G   +   +  +M+ D + PN+++  TL+    + G      
Sbjct: 308 CKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNID 367

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +    +  G+  + +  ++ I +    G  E A++L   M  +  +P+ VT+  +I   
Sbjct: 368 SVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGC 427

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
                  C +   E  L   KE  +L    S +                ++  ++   + 
Sbjct: 428 -------CRMSKYEEALCFFKEMLDLRIPLSSE----------------IYSSMICAYSK 464

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
           QG        +++    +F  +      P++VT++A++NA S    +E    L +E+   
Sbjct: 465 QG--------QLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEAN 516

Query: 675 DNQVYGVAHGLLM 687
           + Q+  +A   LM
Sbjct: 517 NIQLDSIACSALM 529



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 150/319 (47%), Gaps = 3/319 (0%)

Query: 199 MISILGRLG-KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           +++  GR G KV++   +    L   + NT+   SA I +Y   G  ++AI+++ SM+  
Sbjct: 353 LLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSA-IGSYMNIGEYEKAINLYRSMENK 411

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             KP+ VT+  +I  C +    ++  +  F +ML   +      ++S++   S+ G    
Sbjct: 412 TTKPDSVTFTILISGCCRMS-KYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVK 470

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A +LFN +   G   D+ TY  +++A       +    +  EM A NI  + +  S ++ 
Sbjct: 471 AESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQLDSIACSALMK 530

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            + K  +  + L +   MK  GI  +  ++  +LS  + L  + +A  +   ME S    
Sbjct: 531 AFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSACSILRDWRKATDLINLMEPSFHLV 590

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
              T N LL   GK GK + + ++F +  A   S N+ TYS L+      G +++ +++ 
Sbjct: 591 SLGTINHLLQFLGKSGKTEIMIKLFYRFVALGSSVNINTYSILLKNLLSAGKWRKYIEVL 650

Query: 498 REFKQAGLKADVVLYSALI 516
           +    AG++    +Y+ ++
Sbjct: 651 QWMNDAGIQPSHAMYNNIL 669



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 120/294 (40%), Gaps = 38/294 (12%)

Query: 168 NRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNT 227
           N GE+ KAI  +  +++ +  K D     + +IS   R+ K + A   F+  L+     +
Sbjct: 394 NIGEYEKAINLYR-SMENKTTKPDSVTF-TILISGCCRMSKYEEALCFFKEMLDLRIPLS 451

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
              +S++I AY + G   +A S+FNS+K     P+LVTY A+I+A     + ++ V  ++
Sbjct: 452 SEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEM-WEKVCALY 510

Query: 288 DDMLRNGVQPDRIT-----------------------------------FNSLLAVCSRG 312
            +M  N +Q D I                                    F  +L+ CS  
Sbjct: 511 QEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSACSIL 570

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
             W  A +L N M        + T N LL  + K  + ++  ++     A   S N+ TY
Sbjct: 571 RDWRKATDLINLMEPSFHLVSLGTINHLLQFLGKSGKTEIMIKLFYRFVALGSSVNINTY 630

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           S ++     AG+    + +   M   GI      YN +L      G  E A ++
Sbjct: 631 SILLKNLLSAGKWRKYIEVLQWMNDAGIQPSHAMYNNILFFAQHCGDAEYAAVI 684


>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
          Length = 977

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/543 (25%), Positives = 255/543 (46%), Gaps = 54/543 (9%)

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   D  TY T++  + +  Q     +++ EM      PN VTY+ +I  Y +A  L++A
Sbjct: 476 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 535

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           +N+F++M+  G   DRV+Y T++ I+AK G  + A+ + + M++ G+  D  TY+ ++  
Sbjct: 536 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 595

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            GK G      ++F +M     +PNL+TY+ ++D+++K   Y+ A++++R+ + AG + D
Sbjct: 596 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 655

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            V YS +++ L   G +E A ++  EM ++   P+   Y  ++D +G++   E       
Sbjct: 656 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE------- 708

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
                Q   A L A        ++    T N ++  F  L   K  +  +          
Sbjct: 709 --KAWQWYQAMLHA-------GLRPNVPTCNSLLSTF--LRVNKIAEAYE---------- 747

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
              + Q M  L ++P++ T++ +L+ C+   S  D     + +    +     AH  L+ 
Sbjct: 748 ---LLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHP----AHMFLLK 800

Query: 689 YR------DNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
                   +N+   A +  D +   D  +     +A+ D L   GQK  A  V     ++
Sbjct: 801 MPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQK 860

Query: 743 QVWENVWSE-SC----LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGK 797
            V+ +   E SC    ++LH+MS G A   +   L      +      P  + I+TGWG+
Sbjct: 861 NVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGR 920

Query: 798 HSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDD 857
            S+V G   +R+AVE LL   G+PF+  + N G F+ +G  +  WL +S        H +
Sbjct: 921 RSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVGSGEPLNRWLLQS--------HVE 972

Query: 858 RTH 860
           R H
Sbjct: 973 RMH 975



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 166/327 (50%), Gaps = 10/327 (3%)

Query: 247 AISVFNSMKRY-NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A+  F  +KR    K +  TY  ++   G+    F  + ++ D+M+R+G QP+ +T+N L
Sbjct: 464 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK-QFGAINKLLDEMVRDGCQPNTVTYNRL 522

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    R      A N+FN+M   G   D  TY TL+D   K   +D+A ++   M A  +
Sbjct: 523 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 582

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           SP+  TYS +I+   KAG L  A  +F EM   G   + V+YN ++ ++AK   ++ AL 
Sbjct: 583 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 642

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + ++M+++G   D VTY+ ++   G  G  +E   +F +M+     P+   Y  L+D++ 
Sbjct: 643 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 702

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G  ++A Q ++    AGL+ +V   ++L+    +   +  A  LL  M   G+RP++ 
Sbjct: 703 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 762

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLG 572
           TY  ++          CT    + D+G
Sbjct: 763 TYTLLLSC--------CTDGRSKLDMG 781



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 150/309 (48%), Gaps = 1/309 (0%)

Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
           F + +KR+      G   + M+  LGR  +      + +  + +G       ++ LI +Y
Sbjct: 467 FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSY 526

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
           GR+ Y  EA++VFN M+    KP+ VTY  +ID   K G      ++++  M   G+ PD
Sbjct: 527 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF-LDIAMDMYQRMQAGGLSPD 585

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
             T++ ++    + G   AA  LF EMV +G   ++ TYN ++D   K      A ++  
Sbjct: 586 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 645

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
           +M      P+ VTYS +++     G L++A  +F+EM+      D   Y  ++ ++ K G
Sbjct: 646 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 705

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
             E+A    + M  +G+R +  T N+LL  + +  K  E   + + M A  + P+L TY+
Sbjct: 706 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 765

Query: 479 TLIDVYSKG 487
            L+   + G
Sbjct: 766 LLLSCCTDG 774



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/317 (19%), Positives = 129/317 (40%), Gaps = 38/317 (11%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           S + V ++ + L RF       + +++ G+R DA   N +L    +   Y      F  +
Sbjct: 415 SGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWL 471

Query: 466 KADCVSPNLL----TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           K     P       TY+T++    +   +    ++  E  + G + + V Y+ LI +  +
Sbjct: 472 KRQ---PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGR 528

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
              +  A+++ ++M + G +P+ VTY ++ID   ++        D+  D+ ++ ++  L 
Sbjct: 529 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL-----DIAMDMYQRMQAGGLS 583

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC-----------IL 630
                    +   G+  +  +    +L  E   QG   N     I+             L
Sbjct: 584 PDTFTYSVIINCLGKAGH--LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 641

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLL 686
            +++ M     +P+ VT+S ++     C   E+A  +  E++    + D  VYG+    L
Sbjct: 642 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD-L 700

Query: 687 MGYRDNI-----WVQAL 698
            G   N+     W QA+
Sbjct: 701 WGKAGNVEKAWQWYQAM 717


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 184/350 (52%), Gaps = 3/350 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V+ A+ IF+     G     Y + + IS   + G  +EA  +   MK   L+P  VTY
Sbjct: 240 GRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTY 299

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +ID  C KG ++     +  D M+R G+ P   T+N L+         + A  +  EM
Sbjct: 300 NTLIDGYCNKGNLEM--AFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEM 357

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             +G+  D  TYN L++  C+   +  AF +  EM +K I P  VTY+++I   +K GR+
Sbjct: 358 SEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRM 417

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             A ++F ++   GI  D + +N ++  +   G  + A  + KEM+   +  D VT+N L
Sbjct: 418 KQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTL 477

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  ++GK +  R + E+MK+  + P+ ++Y+TLI  YSK G  K+A ++  E    G 
Sbjct: 478 MQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGF 537

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
              ++ Y+ALI  LCKN   + A  LL EM  +GI PN  TY S+I+  G
Sbjct: 538 NPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIG 587



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 187/359 (52%), Gaps = 3/359 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           M+S+  +  + + A  ++         ++V  F+ +I+   + G  ++A      M+   
Sbjct: 162 MLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALG 221

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           +KPN+VTYN +I   C +G V+   +  IFD M   GV+PD  T+ S ++   + G  E 
Sbjct: 222 IKPNVVTYNTIIHGYCSRGRVEGARM--IFDLMKCRGVKPDSYTYGSFISGMCKEGKLEE 279

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +  +M   G+     TYNTL+D  C    +++AF+   +M  + + P V TY+ +I 
Sbjct: 280 ASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIH 339

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
                 ++D+A  +  EM   G+  D V+YN +++ Y + G  ++A  +  EM S GI+ 
Sbjct: 340 ALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQP 399

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
             VTY +L+    K+G+  +   +FE++    + P+L+ ++ LID +   G    A  + 
Sbjct: 400 TRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAML 459

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           +E  Q  +  D V ++ L+   C+ G VE+A  L++EM   GI+P+ ++YN++I  + +
Sbjct: 460 KEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSK 518



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 198/411 (48%), Gaps = 36/411 (8%)

Query: 264 VTYNAVIDACG--KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           V Y+ +I AC   K G D     E FD M   GV P     N +L++  +    E A  L
Sbjct: 122 VLYDLLIRACCELKRGDD---AFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVL 178

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           + EM    I   + T+N +++ +CK  ++  A E +  M A  I PNVVTY+T+I GY  
Sbjct: 179 YAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCS 238

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            GR++ A  +F  MK  G+  D  +Y + +S   K G+ EEA  + ++M+  G+R  AVT
Sbjct: 239 RGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVT 298

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN L+ GY  +G  +      ++M  + + P + TY+ LI          EA  I +E  
Sbjct: 299 YNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMS 358

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + GL  D V Y+ LI+  C+ G V+ A +L DEM  +GI+P  VTY S+I    +     
Sbjct: 359 EKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKR---- 414

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
                     G+ K++ +L       +K V++    D   + +F  L+      G  +  
Sbjct: 415 ----------GRMKQADDL------FEKIVRKGIFPD---LIMFNALIDGHCANGNMDRA 455

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                     + ++M ++K+ P+ VTF+ ++    R    E A  L+EE++
Sbjct: 456 --------FAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMK 498



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 108/218 (49%), Gaps = 6/218 (2%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G V  A  + +  +++G   T   +++LI    + G  ++A  +F  + R  + P+L+
Sbjct: 378 RCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLI 437

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            +NA+ID  C  G +D      +  +M +  V PD +TFN+L+    R G  EAAR L  
Sbjct: 438 MFNALIDGHCANGNMD--RAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIE 495

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EM  RGI  D  +YNTL+    K   M  AF +  EM +   +P ++TY+ +I G  K  
Sbjct: 496 EMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNE 555

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
             D A  +  EM   GI  +    NT LS+   +G  E
Sbjct: 556 EGDHAEQLLKEMISKGITPND---NTYLSLIEGIGNVE 590



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 106/183 (57%), Gaps = 3/183 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I +L + G++  A ++FE  + +G    +  F+ALI  +  +G    A ++   M +
Sbjct: 405 TSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQ 464

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + P+ VT+N ++   C +G V+     E+ ++M   G++PD I++N+L++  S+ G  
Sbjct: 465 MKVVPDEVTFNTLMQGRCREGKVEAAR--ELIEEMKSRGIKPDHISYNTLISGYSKRGDM 522

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  + +EM+  G +  + TYN L+  +CK  + D A +++ EM +K I+PN  TY ++
Sbjct: 523 KDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSL 582

Query: 376 IDG 378
           I+G
Sbjct: 583 IEG 585



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 36/226 (15%)

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
           K  V Y+ L+    +  + D+    F+ MK   V P++   + ++ ++ K    ++A  +
Sbjct: 119 KTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVL 178

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           + E  +  +K+ VV ++ +I+ LCK G ++ A   +  M   GI+PNVVTYN+II  +  
Sbjct: 179 YAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCS 238

Query: 557 SATTECT--VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
               E    + D+ +  G + +S                           +G  ++    
Sbjct: 239 RGRVEGARMIFDLMKCRGVKPDSYT-------------------------YGSFISGMCK 273

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA-CSRCN 659
           +GK E           G+ +KM ++ ++P  VT++ +++  C++ N
Sbjct: 274 EGKLEEAS--------GMLEKMKEIGLRPTAVTYNTLIDGYCNKGN 311


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 229/456 (50%), Gaps = 23/456 (5%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           ++++ +I+   RSG   +A+ VF+ M    + PN +TYN +ID   KGG D +    + D
Sbjct: 17  FSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGG-DLEAGFRLRD 75

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            ML +G +P+ +T+N LL+   R G  +  R L +EM    +  D FTY+ L D + +  
Sbjct: 76  QMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTG 135

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +      + AE   K +     T S +++G  K G++  A  +   +   G+    V YN
Sbjct: 136 ESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYN 195

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+++ Y ++     A  + ++M+S  IR D +TYNAL+ G  K     +   +  +M+  
Sbjct: 196 TLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKS 255

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V P++ T++TLID Y   G  ++   +  + +Q G+K+DV+ + +++ A CKNG +  A
Sbjct: 256 GVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEA 315

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LD 581
           V++LD+M  + + PN   YNSIIDA+  S  TE     VE+ +     SA+       L 
Sbjct: 316 VAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEK-MKNSGVSASIVTYNLLLK 374

Query: 582 AMC--SQDDKDVQEAGRTDNQIIK----VFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
            +C  SQ D+  +      NQ ++     +  +++    +G  +          L + Q+
Sbjct: 375 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKA--------LELLQE 426

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           M+K  I+P + T+  +++A +      D   L +++
Sbjct: 427 MNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 462



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 227/465 (48%), Gaps = 32/465 (6%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++    + +  L++G    +  ++ L+S   R+G   E   + + M  +++ P+  TY
Sbjct: 65  GDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTY 124

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           + + D   + G + + ++ +F + L+ GV     T + LL    + G    A  +   +V
Sbjct: 125 SILFDGLTRTG-ESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLV 183

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
           H G+      YNTL++  C+   +  AF I  +M +++I P+ +TY+ +I+G  K   + 
Sbjct: 184 HTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVT 243

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            A ++  EM+  G+     ++NT++  Y   G+ E+   V  +M+  GI+ D +++ +++
Sbjct: 244 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVV 303

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
             + K GK  E   + + M    V+PN   Y+++ID Y + G  ++A  +  + K +G+ 
Sbjct: 304 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVS 363

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
           A +V Y+ L+  LC++  ++ A  L+  +  +G+RP+VV+YN+II A        C   D
Sbjct: 364 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISAC-------CNKGD 416

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
            ++ L   +E          +   ++   RT       +  LV+  A  G+       ++
Sbjct: 417 TDKALELLQE---------MNKYGIRPTLRT-------YHTLVSALASAGRV-----HDM 455

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            C+   +Q+M    ++P+   +  +++A  RC +    + L +E+
Sbjct: 456 ECL---YQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEM 497



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 189/382 (49%), Gaps = 3/382 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L   L   GE    +  FA ++K+           S +++ L + GKV  A+ + E 
Sbjct: 124 YSILFDGLTRTGESRTMLSLFAESLKKGVMLG--AYTCSILLNGLCKDGKVAKAEQVLEM 181

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            ++ G   T   ++ LI+ Y +    + A  +F  MK  +++P+ +TYNA+I+   K  +
Sbjct: 182 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 241

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K   ++  +M ++GV P   TFN+L+      G  E    + ++M  +GI  D+ ++ 
Sbjct: 242 VTK-AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 300

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +++ A CK  ++  A  I+ +M  K+++PN   Y+++ID Y ++G  + A  +  +MK  
Sbjct: 301 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNS 360

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+    V+YN +L    +  + +EA  +   + + G+R D V+YN ++     +G  D+ 
Sbjct: 361 GVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKA 420

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + ++M    + P L TY TL+   +  G   +   ++++     ++    +Y  ++DA
Sbjct: 421 LELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 480

Query: 519 LCKNGLVESAVSLLDEMTKEGI 540
             +        SL  EM+++GI
Sbjct: 481 YVRCENDSKVASLKKEMSEKGI 502



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 174/376 (46%), Gaps = 31/376 (8%)

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           PD  ++N ++A   R G    A  +F+EMV  G+  +  TYNT++D   KG  ++  F +
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
             +M      PN+VTY+ ++ G  +AGR+D+   +  EM    +  D  +Y+ +     +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
            G     L +  E    G+   A T + LL G  K GK  +  ++ E +    + P  + 
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y+TLI+ Y +    + A  IF + K   ++ D + Y+ALI+ LCK  +V  A  L+ EM 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
           K G+ P+V T+N++IDA+G +   E                      C     D+Q+ G 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLE---------------------KCFTVLSDMQQKGI 292

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
             + I   FG +V      GK        I   + +   M    + PN   +++I++A  
Sbjct: 293 KSDVI--SFGSVVKAFCKNGK--------IPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 342

Query: 657 RCNSFEDASMLLEELR 672
                E A +L+E+++
Sbjct: 343 ESGDTEQAFLLVEKMK 358


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 188/352 (53%), Gaps = 4/352 (1%)

Query: 207 GKVDLA-KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           G+++ A + I E +L EG+    Y F+ L++   ++G+ + A+ V + M R    P++ T
Sbjct: 279 GRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYT 338

Query: 266 YNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           YN++I   C  G VD    V++ + M+     P+ +T+N++++   +    E A  L   
Sbjct: 339 YNSLISGLCKLGEVD--EAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALV 396

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           +  +GI  D+ TYN+L+  +C      +A E+  EM  K   P+  TY+ +ID     G+
Sbjct: 397 LTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGK 456

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           L +ALN+  EM+  G   + ++YNT++  + K  R  EA  +  +ME  G+ +++VTYN 
Sbjct: 457 LQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNT 516

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G  K  + +E  ++ +QM  + + P+  TY++L+  + K G  K+A  I +     G
Sbjct: 517 LIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDG 576

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            + D+V Y  LI  LCK G VE+A  LL  +  +GI      YN +I A  R
Sbjct: 577 CEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFR 628



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 190/357 (53%), Gaps = 4/357 (1%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK-RYNLKPNLVT 265
           G +D A  + E  +  G   T    + L++ + + G  +EA+     M  R    P+  T
Sbjct: 244 GNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYT 303

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNE 324
           +N +++   K G   KH +E+ D MLR G  PD  T+NSL++ +C  G + EA + L N+
Sbjct: 304 FNMLVNGLSKTG-HVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVL-NQ 361

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+ R    +  TYNT++  +CK  Q++ A ++   +  K I P+V TY+++I G   +  
Sbjct: 362 MIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRN 421

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
              A+ ++ EMK  G   D  +YN ++      G+ +EAL + KEME SG  ++ +TYN 
Sbjct: 422 HTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNT 481

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G+ K  +  E   +F+QM+   VS N +TY+TLID   K    +EA Q+  +    G
Sbjct: 482 LIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEG 541

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           L+ D   Y++L+   CK G ++ A  ++  M  +G  P++VTY ++I    ++   E
Sbjct: 542 LRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVE 598



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 181/353 (51%), Gaps = 3/353 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +++ L + G V  A  + +  L EG+   +Y +++LIS   + G   EA+ V N M   +
Sbjct: 307 LVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERD 366

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             PN VTYN +I   C +  V+     ++   +   G+ PD  T+NSL+           
Sbjct: 367 CSPNTVTYNTIISTLCKENQVE--EATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTV 424

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  L+ EM  +G   D FTYN L+D++C   ++  A  ++ EM     + NV+TY+T+ID
Sbjct: 425 AMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLID 484

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+ K  R+ +A  +F +M+  G+  + V+YNT++    K  R EEA  +  +M   G+R 
Sbjct: 485 GFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRP 544

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  TYN+LL  + K G   +   + + M +D   P+++TY TLI    K G  + A ++ 
Sbjct: 545 DKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLL 604

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           R  +  G+      Y+ +I AL +    + AV L  EM ++   P+ VTY  +
Sbjct: 605 RTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIV 657



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 150/588 (25%), Positives = 269/588 (45%), Gaps = 69/588 (11%)

Query: 23  HNHLKNNHHRQSHHPSSRPHWTSHKVSLTKPPLSPSPRNAPKPAATSTTVAPNPKP---F 79
           H     +HH  SH P+S  + T    +    PL+ +  +A       T ++PN  P    
Sbjct: 10  HTWFPFHHHLASHKPTS--NSTLSFATTNHEPLTTTTNSA-------TRLSPNFTPTQLL 60

Query: 80  HSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDD 139
           HSL     S + +   +   +   F       +P        S + +E LH +      D
Sbjct: 61  HSLRREEDSSAVIHLFYWASKQPNF-------KPS-------SSIFKEVLHKLGKAGEFD 106

Query: 140 VSLGDILKKFEFKLCGADDYTFL--LRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS 197
            ++ DILK+ +  L   D+ + L  +    + G +++ +Q F  A++ E          +
Sbjct: 107 -AMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQ-FVDAMEVEFGVVANTHFYN 164

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            ++++L    K+ L +      ++ G    V  F+ LI A  R+   + AI +   M+ +
Sbjct: 165 FLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDF 224

Query: 258 NLKPNLVTYNAVIDA------------------------------------CGKGGVDFK 281
            L P+  T+  ++                                      C +G ++  
Sbjct: 225 GLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIE-- 282

Query: 282 HVVEIFDDM-LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
             +   ++M LR G  PD+ TFN L+   S+ G  + A  + + M+  G D DI+TYN+L
Sbjct: 283 EALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSL 342

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +  +CK  ++D A +++ +M  ++ SPN VTY+T+I    K  ++++A  +   +   GI
Sbjct: 343 ISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGI 402

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D  +YN+++           A+ + KEM++ G   D  TYN L+     +GK  E   
Sbjct: 403 LPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALN 462

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + ++M+    + N++TY+TLID + K     EA +IF + +  G+  + V Y+ LID LC
Sbjct: 463 LLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLC 522

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
           K+  VE A  L+D+M  EG+RP+  TYNS++  F ++   +   D V+
Sbjct: 523 KSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQ 570



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 207/483 (42%), Gaps = 102/483 (21%)

Query: 280 FKHVVEIFDDM-LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           +  +++  D M +  GV  +   +N LL V   G   +      + MV RGI  D+ T+N
Sbjct: 140 YNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFN 199

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID--------------------- 377
            L+ A+C+  Q+  A  +M EM    + P+  T++T++                      
Sbjct: 200 ILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEA 259

Query: 378 --------------GYAKAGRLDDALNMFSEMKFL-GIGLDRVSYNTVLSIYAKLGRFEE 422
                         G+ K GR+++AL    EM    G   D+ ++N +++  +K G  + 
Sbjct: 260 GCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKH 319

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLI 481
           AL V   M   G   D  TYN+L+ G  K G+ DE  ++  QM + DC SPN +TY+T+I
Sbjct: 320 ALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDC-SPNTVTYNTII 378

Query: 482 DVYSKGGLYKE-----------------------------------AMQIFREFKQAGLK 506
               K    +E                                   AM++++E K  G  
Sbjct: 379 STLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCH 438

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECT 563
            D   Y+ LID+LC  G ++ A++LL EM   G   NV+TYN++ID F    R A  E  
Sbjct: 439 PDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEI 498

Query: 564 VDDVE-RDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIK--------VFGQLVAE- 611
            D +E + + +   + N  +D +C  +   V+EA +  +Q+I          +  L+   
Sbjct: 499 FDQMELQGVSRNSVTYNTLIDGLCKSE--RVEEASQLMDQMIMEGLRPDKFTYNSLLTYF 556

Query: 612 -KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
            KAG  KK             + Q M     +P++VT+  ++    +    E A+ LL  
Sbjct: 557 CKAGDIKKAA----------DIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRT 606

Query: 671 LRL 673
           +++
Sbjct: 607 IQM 609



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 233/500 (46%), Gaps = 50/500 (10%)

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           K+ N KP+   +  V+   GK G +F  + +I  +M  +    D  +    +   +  GL
Sbjct: 81  KQPNFKPSSSIFKEVLHKLGKAG-EFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGL 139

Query: 315 WEAARNLFNEM-VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           +       + M V  G+  +   YN LL+ +  G ++ L     + M ++ I P+V T++
Sbjct: 140 YNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFN 199

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I    +A ++  A+ +  EM+  G+  D  ++ T++  + + G  + A+ V ++M  +
Sbjct: 200 ILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEA 259

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA-DCVSPNLLTYSTLIDVYSKGGLYKE 492
           G     VT N L+ G+ K+G+ +E  R  E+M   +   P+  T++ L++  SK G  K 
Sbjct: 260 GCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKH 319

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A+++     + G   D+  Y++LI  LCK G V+ AV +L++M +    PN VTYN+II 
Sbjct: 320 ALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTII- 378

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
                 +T C  + VE       E+  L  + +   K +     T N +I          
Sbjct: 379 ------STLCKENQVE-------EATKLALVLT--GKGILPDVCTYNSLI---------- 413

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             QG   +R        + ++++M      P+  T++ ++++       ++A  LL+E+ 
Sbjct: 414 --QGLCLSRNHT---VAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEM- 467

Query: 673 LFDNQVYGVAHG------LLMGYRDNIWV-QALSLFDEVKLMDSSTASAFYNALTDMLWH 725
               +V G A        L+ G+  N  + +A  +FD+++L   S  S  YN L D L  
Sbjct: 468 ----EVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCK 523

Query: 726 FGQ-KRGAQL---VVLEGKR 741
             + +  +QL   +++EG R
Sbjct: 524 SERVEEASQLMDQMIMEGLR 543


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 193/367 (52%), Gaps = 6/367 (1%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +I    R+GK   A  I E     G    V  ++ +IS Y ++G    A+SV +   
Sbjct: 140 CTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLD--- 196

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
           R ++ P++VTYN ++ +    G   K  +E+ D ML+    PD IT+  L+ A C   G+
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSG-KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +A + L +EM  RG   D+ TYN L++ ICK  ++D A + + +MP+    PNV+T++ 
Sbjct: 256 GQAMK-LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++      GR  DA  + ++M   G     V++N +++   + G    A+ + ++M   G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG 374

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
            + ++++YN LL G+ K+ K D      E+M +    P+++TY+T++    K G  ++A+
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +I  +    G    ++ Y+ +ID L K G    A+ LLDEM  + ++P+ +TY+S++   
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494

Query: 555 GRSATTE 561
            R    +
Sbjct: 495 SREGKVD 501



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 183/349 (52%), Gaps = 3/349 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A  + +  L       V  ++ LI A  R     +A+ + + M+     P++VTY
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTY 277

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +++  C +G +D    ++  +DM  +G QP+ IT N +L      G W  A  L  +M
Sbjct: 278 NVLVNGICKEGRLD--EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           + +G    + T+N L++ +C+   +  A +I+ +MP     PN ++Y+ ++ G+ K  ++
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKM 395

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D A+     M   G   D V+YNT+L+   K G+ E+A+ +  ++ S G     +TYN +
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K GK  +  ++ ++M+A  + P+ +TYS+L+   S+ G   EA++ F EF++ G+
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGV 515

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + + V +++++  LCK    + A+  L  M   G +P   +Y  +I+  
Sbjct: 516 RPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGL 564



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 219/451 (48%), Gaps = 37/451 (8%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R G+++      E  +  G    +   + LI  + R G  ++A  +   ++     P+
Sbjct: 112 LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPD 171

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
           ++TYN +I    K G +  + + + D M    V PD +T+N++L ++C  G L +A   +
Sbjct: 172 VITYNVMISGYCKAG-EINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME-V 226

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            + M+ R    D+ TY  L++A C+ + +  A +++ EM  +  +P+VVTY+ +++G  K
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            GRLD+A+   ++M   G   + +++N +L      GR+ +A  +  +M   G     VT
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           +N L+    ++G       + E+M      PN L+Y+ L+  + K      A++      
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G   D+V Y+ ++ ALCK+G VE AV +L++++ +G  P ++TYN++ID   ++  T 
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT- 465

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
                        K    LD M ++D K         + I   +  LV   + +GK +  
Sbjct: 466 ------------GKAIKLLDEMRAKDLK--------PDTI--TYSSLVGGLSREGKVDE- 502

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
                   +  F +  ++ ++PN VTF++I+
Sbjct: 503 -------AIKFFHEFERMGVRPNAVTFNSIM 526



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 180/383 (46%), Gaps = 40/383 (10%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +LR L + G+  +A++     ++R+   +      + +I    R   V  A  + + 
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI--TYTILIEATCRDSGVGQAMKLLDE 264

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
             + G    V  ++ L++   + G   EAI   N M     +PN++T+N ++ + C  G 
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG- 323

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM------------ 325
             +    ++  DMLR G  P  +TFN L+    R GL   A ++  +M            
Sbjct: 324 -RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSY 382

Query: 326 -----------------------VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
                                  V RG   DI TYNT+L A+CK  +++ A EI+ ++ +
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
           K  SP ++TY+T+IDG AKAG+   A+ +  EM+   +  D ++Y++++   ++ G+ +E
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A+    E E  G+R +AVT+N+++ G  K  + D        M      P   +Y+ LI+
Sbjct: 503 AIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIE 562

Query: 483 VYSKGGLYKEAMQIFREFKQAGL 505
             +  G+ KEA+++  E    GL
Sbjct: 563 GLAYEGMAKEALELLNELCNKGL 585



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/401 (23%), Positives = 187/401 (46%), Gaps = 27/401 (6%)

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +  ++M+ +G  PD I   +L+    R G    A  +   +   G   D+ TYN ++   
Sbjct: 123 KFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGY 182

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK  +++ A  ++  M   ++SP+VVTY+T++     +G+L  A+ +   M       D 
Sbjct: 183 CKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           ++Y  ++    +     +A+ +  EM   G   D VTYN L+ G  K+G+ DE  +    
Sbjct: 240 ITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M +    PN++T++ ++      G + +A ++  +  + G    VV ++ LI+ LC+ GL
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ------KESA 578
           +  A+ +L++M K G +PN ++YN ++  F +    +  ++ +ER + +         + 
Sbjct: 360 LGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419

Query: 579 NLDAMCSQDDKDVQEAGRTDNQ--------IIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
            L A+C   D  V++A    NQ        ++  +  ++   A  GK            +
Sbjct: 420 MLTALCK--DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK--------AI 469

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            +  +M    +KP+ +T+S+++   SR    ++A     E 
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 38/262 (14%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ +    L +G+  +V  F+ LI+   R G    AI +   M ++  +PN ++YN ++ 
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLH 387

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
             C +  +D    +E  + M+  G  PD +T+N++L    + G  E A  + N++  +G 
Sbjct: 388 GFCKEKKMD--RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN-------------------------- 364
              + TYNT++D + K  +   A +++ EM AK+                          
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505

Query: 365 ---------ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
                    + PN VT+++++ G  K  + D A++    M   G      SY  ++   A
Sbjct: 506 FFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLA 565

Query: 416 KLGRFEEALLVCKEMESSGIRK 437
             G  +EAL +  E+ + G+ K
Sbjct: 566 YEGMAKEALELLNELCNKGLMK 587



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 122/283 (43%), Gaps = 25/283 (8%)

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
           L+ V  N  L    + G  EE     + M   G   D +    L+ G+ + GK  +  ++
Sbjct: 100 LEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKI 159

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            E ++     P+++TY+ +I  Y K G    A+ +     +  +  DVV Y+ ++ +LC 
Sbjct: 160 LEVLEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCD 216

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESAN 579
           +G ++ A+ +LD M +    P+V+TY  +I+A  R +     +   D  RD G   +   
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVT 276

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI----LCILGVFQK 635
            + + +     + + GR D  I     + + +    G + N     I    +C  G +  
Sbjct: 277 YNVLVN----GICKEGRLDEAI-----KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327

Query: 636 MHKL-------KIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             KL          P+VVTF+ ++N   R      A  +LE++
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370


>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
 gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 211/400 (52%), Gaps = 5/400 (1%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           +Y+ ++R L  +     AI    +     ++     +L++ +I    + G  DL+K +  
Sbjct: 235 NYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAG--DLSKALEF 292

Query: 218 TALNEGYGNTVYAFS--ALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
             + +G G +V   +  A+I A G  G   EA ++F  M+   LKP    YNA++    K
Sbjct: 293 LGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVK 352

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            G+  K    +  +M R+GV P+  T++ L+      G WE+AR +  EM    +  + +
Sbjct: 353 AGL-LKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAY 411

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            ++ +L +     +   +F+++ EM    + P+ V Y+ MID + K   LD A+  F  M
Sbjct: 412 VFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRM 471

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              GI  D V++NT++  + + G+ + A  + +EM   G      T+N ++  +G Q ++
Sbjct: 472 LSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERW 531

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D+V+ +   M++  + PN +TY+TLID+Y K G + +A++   + K AGLK    +Y+AL
Sbjct: 532 DDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNAL 591

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I+A  + GL E AVS    M  +G++P+++  NS+I+AFG
Sbjct: 592 INAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFG 631



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 188/380 (49%), Gaps = 34/380 (8%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+I  LG  G+   A+ IFE   + G      A++AL+  Y ++G  ++A  V + M+R 
Sbjct: 310 AVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERS 369

Query: 258 NLKPNLVTYNAVIDACGKGGV----------------------------------DFKHV 283
            + PN  TY+ +IDA G  G                                   +++  
Sbjct: 370 GVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKS 429

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
            ++  +M  +GV+PDR+ +N ++    +    + A   F+ M+  GI+ D  T+NTL+D 
Sbjct: 430 FQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDC 489

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C+  + D A E+  EM     SP   T++ MI+ +    R DD  N+ + M+  G+  +
Sbjct: 490 HCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPN 549

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V+Y T++ IY K GRF +A+    +M+++G++  +  YNAL+  Y ++G  ++    F 
Sbjct: 550 SVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFR 609

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
            M+ D + P+LL  ++LI+ + +     EA  + +  K+  LK DVV Y+ L+ AL +  
Sbjct: 610 AMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVE 669

Query: 524 LVESAVSLLDEMTKEGIRPN 543
             +   S+ +EM   G  P+
Sbjct: 670 KFDKVPSVYEEMILSGCTPD 689



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 202/443 (45%), Gaps = 38/443 (8%)

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDM 290
           +I  + ++G   +A+     ++   L     T  AVI A G  G      VE   IF++M
Sbjct: 276 IIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCG----RTVEAEAIFEEM 331

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
             NG++P    +N+LL    + GL + A  + +EM   G+  +  TY+ L+DA     + 
Sbjct: 332 RDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRW 391

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           + A  ++ EM A N+ PN   +S ++  Y   G    +  +  EM+  G+  DRV YN +
Sbjct: 392 ESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVM 451

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +  + K    + A+     M S GI  D VT+N L+  + + GK+D    +FE+M     
Sbjct: 452 IDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGY 511

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           SP   T++ +I+ +     + +   +    +  GL  + V Y+ LID   K+G    A+ 
Sbjct: 512 SPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIE 571

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
            LD+M   G++P+   YN++I+A+ +   +E  V    R +       +L A+       
Sbjct: 572 CLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAF-RAMRVDGLKPSLLAL------- 623

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
                   N +I  FG            E+R   E   +L   Q M +  +KP+VVT++ 
Sbjct: 624 --------NSLINAFG------------EDRRDAEAFTVL---QYMKENDLKPDVVTYTT 660

Query: 651 ILNACSRCNSFEDASMLLEELRL 673
           ++ A  R   F+    + EE+ L
Sbjct: 661 LMKALIRVEKFDKVPSVYEEMIL 683



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 171/341 (50%), Gaps = 7/341 (2%)

Query: 181 FAVKREERK--NDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
           F V   ER   +   +  S +I   G  G+ + A+ + +           Y FS ++S+Y
Sbjct: 361 FVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSY 420

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
              G  Q++  V   M+   ++P+ V YN +ID  GK      H +  FD ML  G++PD
Sbjct: 421 RDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNC-LDHAMATFDRMLSEGIEPD 479

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
            +T+N+L+    R G  + A  LF EM+  G      T+N ++++     + D    ++A
Sbjct: 480 TVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLA 539

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
            M ++ + PN VTY+T+ID Y K+GR +DA+    +MK  G+      YN +++ YA+ G
Sbjct: 540 HMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRG 599

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
             E+A+   + M   G++   +  N+L+  +G+  +  E   + + MK + + P+++TY+
Sbjct: 600 LSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYT 659

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGL----KADVVLYSAL 515
           TL+    +   + +   ++ E   +G     KA  +L SAL
Sbjct: 660 TLMKALIRVEKFDKVPSVYEEMILSGCTPDRKARAMLRSAL 700



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 208/449 (46%), Gaps = 49/449 (10%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +S LI A G+S    EA   F   +R NL P  +TYNA+I AC +   D +  + +   M
Sbjct: 171 YSILIHALGQSEKLYEA---FLLSQRQNLTP--LTYNALISACARNN-DLEKALNLITRM 224

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAA--RNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            ++G   D + ++ ++    R    ++A  + L+ E+    ++ D+   N ++    K  
Sbjct: 225 RQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAG 284

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            +  A E +  +    +S    T   +I      GR  +A  +F EM+  G+     +YN
Sbjct: 285 DLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYN 344

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +L  Y K G  ++A  V  EME SG+  +  TY+ L+  YG  G+++  R + ++M+A 
Sbjct: 345 ALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEAS 404

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V PN   +S ++  Y   G ++++ Q+ RE + +G++ D V Y+ +ID   K   ++ A
Sbjct: 405 NVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHA 464

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           ++  D M  EGI P+ VT+N++ID   R+              GK   +  L        
Sbjct: 465 MATFDRMLSEGIEPDTVTWNTLIDCHCRA--------------GKHDRAEEL-------F 503

Query: 589 KDVQEAG-----RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
           +++ E G      T N +I  FG        Q + ++        +  +   M    + P
Sbjct: 504 EEMMEGGYSPCNTTFNIMINSFGD-------QERWDD--------VKNLLAHMRSQGLVP 548

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELR 672
           N VT++ +++   +   F DA   L++++
Sbjct: 549 NSVTYTTLIDIYGKSGRFNDAIECLDDMK 577


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 182/334 (54%), Gaps = 1/334 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  ++ +I  Y +     EA     SM    L+PNL+T+N +I+   + G   K   E+ 
Sbjct: 18  VVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDG-RLKETSEVL 76

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            +M R G  PD +T+N+L+    + G +  A  L  EMV  G+  ++ TY +L++++CK 
Sbjct: 77  VEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKA 136

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             ++ A E   +M  + + PN  TY+T+I+G+A+ G LD+A  + +EM   G     V+Y
Sbjct: 137 GNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTY 196

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N +++ +  LGR EEA+ + ++M   G+  D V+Y+ ++ G+ +  + D   +M  +M  
Sbjct: 197 NALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIG 256

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             V P+ +TYS+LI    +     EA  +F+E     L  D   Y+ LI+A CK G +  
Sbjct: 257 KSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNK 316

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           A+ L DEM ++G  P+ VTYN +I+   + A ++
Sbjct: 317 ALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSK 350



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 176/357 (49%), Gaps = 43/357 (12%)

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
            F EM   G   ++ TYNT++D  CK  + D AF  +  M  K + PN++T++ +I+G  
Sbjct: 5   FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           + GRL +   +  EM   G   D V+YNT+++ Y K G F +AL++  EM  +G+  + V
Sbjct: 65  RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY +L+    K G  +     F+QM    + PN  TY+T+I+ +++ GL  EA ++  E 
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            ++G    +V Y+ALI+  C  G +E A+ LL +M  +G+ P+VV+Y++II  F R+   
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN--- 241

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG------ 614
                                          QE  R     +++ G+ V   A       
Sbjct: 242 -------------------------------QELDRAFQMKVEMIGKSVLPDAVTYSSLI 270

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           QG  E R R    C   +FQ+M  +K+ P+  T++ ++NA  +      A  L +E+
Sbjct: 271 QGLCEQR-RLTEAC--DMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEM 324



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 187/406 (46%), Gaps = 51/406 (12%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+ L R G++     +      +GY      ++ L++ Y + G   +A+ +   M R  
Sbjct: 59  IINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNG 118

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           L PN+VTY ++I++  K G +    +E FD M   G+ P+  T+ +++   ++ GL + A
Sbjct: 119 LSPNVVTYTSLINSMCKAG-NLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEA 177

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             + NEM   G    I TYN L++  C   +M+ A  ++ +M  K + P+VV+YST+I G
Sbjct: 178 YRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISG 237

Query: 379 YAKAGRLD-----------------------------------DALNMFSEMKFLGIGLD 403
           +A+   LD                                   +A +MF EM  + +  D
Sbjct: 238 FARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPD 297

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +Y T+++ Y K G   +AL +  EM   G   DAVTYN L+ G  KQ +  E RR+  
Sbjct: 298 EFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLL 357

Query: 464 QMKADCVSPNLLTYSTLID-----------VYSKG----GLYKEAMQIFREFKQAGLKAD 508
           ++  D   P+ +TY+TLI+              KG    GL  EA Q+F        K +
Sbjct: 358 KLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPN 417

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             +Y+ +I   C+ G V  A  L  EM      P+ VT  +++ A 
Sbjct: 418 EAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKAL 463



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 171/409 (41%), Gaps = 86/409 (21%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    V  +++LI++  ++G    A+  F+ M    L PN  TY  +I+   + G+    
Sbjct: 118 GLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGL-LDE 176

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
              + ++M R+G  P  +T+N+L+      G  E A  L  +MV +G+  D+ +Y+T++ 
Sbjct: 177 AYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIIS 236

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
              +  ++D AF++  EM  K++ P+ VTYS++I G  +  RL +A +MF EM  + +  
Sbjct: 237 GFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPP 296

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ---------- 452
           D  +Y T+++ Y K G   +AL +  EM   G   DAVTYN L+ G  KQ          
Sbjct: 297 DEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLL 356

Query: 453 ----------------------------------------GKYDEVRRMFEQMKADCVSP 472
                                                   G  DE  ++FE M      P
Sbjct: 357 LKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKP 416

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL------------- 519
           N   Y+ +I  + + G   +A ++++E          V   AL+ AL             
Sbjct: 417 NEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVI 476

Query: 520 ------CK----------------NGLVESAVSLLDEMTKEGIRPNVVT 546
                 CK                 G ++   +LL EM K+G+ P+  T
Sbjct: 477 GDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 193/359 (53%), Gaps = 3/359 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++ A  +    L  G   T    + LI+ Y + G  ++A+           +P+ +TY
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N  ++  C    V   H +++ D M++ G  PD  T+N ++    + G  E A+ + N+M
Sbjct: 290 NTFVNGLCQNDHV--GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V RG   DI T+NTL+ A+C G +++ A ++  ++  K +SP+V T++ +I+   K G  
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             AL +F EMK  G   D V+YNT++     LG+  +AL + K+MES+G  +  +TYN +
Sbjct: 408 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K+ + +E   +F+QM    +S N +T++TLID   K     +A ++  +    GL
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           + + + Y++++   CK G ++ A  +L+ MT  G   +VVTY ++I+   ++  T+  +
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 189/361 (52%), Gaps = 1/361 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +I+   +LG+V+ A    +  + +G+      ++  ++   ++ +   A+ V + M 
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           +    P++ TYN V++   K G   +    I + M+  G  PD  TFN+L+A    G   
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNG-QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A +L  ++  +G+  D++T+N L++A+CK     LA  +  EM     +P+ VTY+T+
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID     G+L  AL++  +M+  G     ++YNT++    K  R EEA  V  +M+  GI
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
            ++A+T+N L+ G  K  K D+   +  QM ++ + PN +TY++++  Y K G  K+A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I       G + DVV Y  LI+ LCK G  + A+ +L  M  +G+RP    YN ++ +  
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 556 R 556
           R
Sbjct: 613 R 613



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 179/347 (51%), Gaps = 1/347 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + +  + EG+   V+ ++ +++   ++G  +EA  + N M      P++ T+N +I 
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           A   G    +  +++   +   GV PD  TFN L+    + G    A  LF EM + G  
Sbjct: 365 ALCTGN-RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 423

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  TYNTL+D +C   ++  A +++ +M +     + +TY+T+IDG  K  R+++A  +
Sbjct: 424 PDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEV 483

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F +M   GI  + +++NT++    K  + ++A  +  +M S G++ + +TYN++L  Y K
Sbjct: 484 FDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK 543

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           QG   +   + E M A+    +++TY TLI+   K G  + A+++ R  +  G++     
Sbjct: 544 QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKA 603

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           Y+ ++ +L +   +  A+SL  EM + G  P+ +TY  +     R  
Sbjct: 604 YNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG 650



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 228/477 (47%), Gaps = 36/477 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++  L R  +V  A  + E   + G       F+ L+  +   G  + A+ V   M  
Sbjct: 185 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
                  VT N +I+  C  G V+    +      + +G +PD+IT+N+ +  +C    +
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVE--DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             A + + + MV  G D D+FTYN +++ +CK  Q++ A  I+ +M  +   P++ T++T
Sbjct: 303 GHALK-VMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I       RL++AL++  ++   G+  D  ++N +++   K+G    AL + +EM++SG
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D VTYN L+      GK  +   + + M++     + +TY+T+ID   K    +EA 
Sbjct: 422 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++F +    G+  + + ++ LID LCK+  ++ A  L+++M  EG++PN +TYNSI+   
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL--- 538

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
               T  C   D+       K++A++    + +  +V          +  +G L+     
Sbjct: 539 ----THYCKQGDI-------KKAADILETMTANGFEVD---------VVTYGTLINGLCK 578

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            G+ +          L V + M    ++P    ++ +L +  R N+  DA  L  E+
Sbjct: 579 AGRTQ--------VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 188/358 (52%), Gaps = 4/358 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +++ L + G+++ AK I    ++ G    +  F+ LI+A       +EA+ +   +    
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
           + P++ T+N +I+A  K G D    + +F++M  +G  PD +T+N+L+  +CS G L +A
Sbjct: 387 VSPDVYTFNILINALCKVG-DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
             +L  +M   G  +   TYNT++D +CK  +++ A E+  +M  + IS N +T++T+ID
Sbjct: 446 L-DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K  ++DDA  + ++M   G+  + ++YN++L+ Y K G  ++A  + + M ++G   
Sbjct: 505 GLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D VTY  L+ G  K G+     ++   M+   + P    Y+ ++    +    ++A+ +F
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624

Query: 498 REFKQAGLKADVVLYSALIDALCK-NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           RE  + G   D + Y  +   LC+  G ++ A   + EM  +G  P   ++  + +  
Sbjct: 625 REMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 138/557 (24%), Positives = 246/557 (44%), Gaps = 60/557 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKR- 256
           +I  LG +G +DL K +      EG+   +    + + +Y       +A+  + N ++  
Sbjct: 80  IIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL 139

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           + ++ + V YN +++   +G    K +  ++ +M   G++PD +TFN+L+    R     
Sbjct: 140 FGIQADTVVYNHLLNVLVEGS-KMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +  EM  RG+  D  T+ TL+    +   ++ A  + A M     S   VT + +I
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY K GR++DAL    +    G   D+++YNT ++   +      AL V   M   G  
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  TYN ++    K G+ +E + +  QM      P++ T++TLI     G   +EA+ +
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            R+    G+  DV  ++ LI+ALCK G    A+ L +EM   G  P+ VTYN++ID    
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL-- 436

Query: 557 SATTECTVDDVER--DLGKQKESAN-----------LDAMCSQ----------DDKDVQE 593
                C++  + +  DL K  ES             +D +C +          D  D+Q 
Sbjct: 437 -----CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 594 AGRT-------------DNQIIKVFGQLVAEKAGQGKKENR----------CRQ-EILCI 629
             R              D +I   F +L+ +   +G + N           C+Q +I   
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAF-ELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG- 688
             + + M     + +VVT+  ++N   +    + A  +L  +R+   +    A+  ++  
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 610

Query: 689 -YRDNIWVQALSLFDEV 704
            +R N    ALSLF E+
Sbjct: 611 LFRRNNIRDALSLFREM 627



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 167/406 (41%), Gaps = 53/406 (13%)

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE- 394
            Y  ++  +     +DL   ++AEM  +     +    + +D Y      DDA+++    
Sbjct: 76  VYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQ 135

Query: 395 -MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
                GI  D V YN +L++  +  + +    V  EM + GI+ D VT+N L+    +  
Sbjct: 136 LQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAH 195

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           +      M E+M +  V+P+  T++TL+  + + G  + A+++     + G  A  V  +
Sbjct: 196 QVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVN 255

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            LI+  CK G VE A+  + +   +G  P+ +TYN+ ++         C  D V   L  
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL-------CQNDHVGHAL-- 306

Query: 574 QKESANLDAMCSQD-DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
                 +D M  +  D DV       N + K  GQL   K                  G+
Sbjct: 307 ----KVMDVMVQEGHDPDVFTYNIVVNCLCK-NGQLEEAK------------------GI 343

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDN 692
             +M      P++ TF+ ++ A    N  E+A  L  ++      V GV+  +   Y  N
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV-----TVKGVSPDV---YTFN 395

Query: 693 IWVQALS----------LFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           I + AL           LF+E+K    +     YN L D L   G+
Sbjct: 396 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 196/354 (55%), Gaps = 3/354 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I +  R G V  A N F + L  G+  +VY  + ++++  ++       S F  M    
Sbjct: 111 LIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSR 170

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           + PN+ ++N +I   C +G    K  V I   M RNG  P  +++N+LL+ C + G ++ 
Sbjct: 171 VCPNVSSFNILISVLCVQG--KLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKF 228

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  L + M  +GI  D+ TYN  +D++C+ ++    + ++ +M  K I+PN V+Y+T+I+
Sbjct: 229 ALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLIN 288

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+ K G++  A  +F+EM  L +  + ++YN +++ Y   G FEEAL V   ME++ +R 
Sbjct: 289 GFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRP 348

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + VT   LL G  K  K+D  R + E+   +  S N ++++ +ID   + GL  EA Q+ 
Sbjct: 349 NEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLL 408

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            E  + G+  D++ +S LI+  CK G +  A  ++ ++ +EG  PN V ++++I
Sbjct: 409 IEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLI 462



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 176/360 (48%), Gaps = 6/360 (1%)

Query: 201 SILGRLGKVDLAKNIFETALNEGY---GNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           SIL  L + +   N     L + Y    +    F  LI  Y R G    A++ F+SM   
Sbjct: 75  SILKHLAQKNSGSNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIR 134

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVV-EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             KP++ T N ++ +  K      H+V   F  ML + V P+  +FN L++V    G  +
Sbjct: 135 GFKPSVYTCNMIMASMVKNCR--AHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLK 192

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A N+   M   G    I +YNTLL   CK  +   A  ++  M  K I  +V TY+  I
Sbjct: 193 KAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFI 252

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D   +  R      +  +M+   I  + VSYNT+++ + K G+   A  V  EM    + 
Sbjct: 253 DSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLS 312

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + +TYN L+ GY   G ++E  R+ + M+A+ V PN +T  TL++   K   +  A  I
Sbjct: 313 PNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNI 372

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
              +       + + ++ +ID LC+NGL++ A  LL EM K+G+ P+++T++ +I+ F +
Sbjct: 373 LERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCK 432



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/515 (23%), Positives = 226/515 (43%), Gaps = 72/515 (13%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           +++ LI+ + + G    A  VFN M   NL PNL+TYN +I+  C  G  +F+  + + D
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCING--NFEEALRVLD 339

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M  N V+P+ +T  +LL    +   ++ ARN+           +  ++  ++D +C+  
Sbjct: 340 VMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNG 399

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            +D AF+++ EM    + P+++T+S +I+G+ K G ++ A  + S++   G   + V ++
Sbjct: 400 LLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFS 459

Query: 409 TVLSIYAKLGRFEEAL---------------LVCKEMESS-------------------- 433
           T++    K+G   EA+                 C  + +S                    
Sbjct: 460 TLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRI 519

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G+  ++VT++ ++ GY   G       +F++M +    P+  TY +L+ V  KG  + EA
Sbjct: 520 GLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEA 579

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            ++ ++     L  D + Y+ LI  + K+G +  AV L +EM +  I P+  TY  I+  
Sbjct: 580 RKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSG 639

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAM---CSQDD--------------KDVQEAGR 596
             R     C    + R +  QKE   L+++   C  D               K+++E G 
Sbjct: 640 LIREGRLVCAFIFLGRLM--QKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGL 697

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
           + + I      +    +  GK        +     +  K     + PN+ TF+ +L+  S
Sbjct: 698 SLDLI--ALNSITDGYSRMGK--------VFSASSLISKTRNKNVIPNLTTFNILLHGYS 747

Query: 657 RCNSFEDASMLLEELR---LFDNQVYGVAHGLLMG 688
           R         L   +R    F N++    H L++G
Sbjct: 748 RGQDIMSCFKLYNLMRRSGFFPNRL--TYHSLILG 780



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 180/380 (47%), Gaps = 31/380 (8%)

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
            F+ L+ V  R G+   A N F+ M+ RG    ++T N ++ ++ K  +  L +    +M
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQM 166

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
               + PNV +++ +I      G+L  A+N+ + M+  G     VSYNT+LS   K GRF
Sbjct: 167 LTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRF 226

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           + AL++   ME  GI+ D  TYN  +    +  +  +   + ++M+   ++PN ++Y+TL
Sbjct: 227 KFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTL 286

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I+ + K G    A ++F E  +  L  +++ Y+ LI+  C NG  E A+ +LD M    +
Sbjct: 287 INGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDV 346

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVER------DLGKQKESANLDAMCSQDDKDVQEA 594
           RPN VT  ++++   +SA  +   + +ER       L     +  +D +C          
Sbjct: 347 RPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRN-------- 398

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL----CILG-------VFQKMHKLKIKP 643
           G  D        QL+ E    G   +     +L    C +G       V  K+++    P
Sbjct: 399 GLLDEAF-----QLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVP 453

Query: 644 NVVTFSAIL-NACSRCNSFE 662
           N V FS ++ N+C   N +E
Sbjct: 454 NNVIFSTLIYNSCKVGNVYE 473



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 213/473 (45%), Gaps = 29/473 (6%)

Query: 216 FETALN-EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           F  A+N  G     +  ++L+++   +G   EA    + + R  L PN VT++ +I+   
Sbjct: 477 FYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYA 536

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG-GLWEAARNLFNEMVHRGIDQD 333
             G D      +FD M+  G  P   T+ SLL V  +G   WE AR L  ++    +  D
Sbjct: 537 NVG-DGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWE-ARKLLKKLHCIPLAVD 594

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             +YNTL+  I K   +  A  +  EM   NI P+  TY+ ++ G  + GRL  A     
Sbjct: 595 TISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLG 654

Query: 394 E-MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
             M+   + L+ + Y   +    K G+ + AL + KEME  G+  D +  N++  GY + 
Sbjct: 655 RLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRM 714

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           GK      +  + +   V PNL T++ L+  YS+G       +++   +++G   + + Y
Sbjct: 715 GKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTY 774

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG 572
            +LI  LC +G++E  + +L     E    + +T+N +I          C ++D+++ + 
Sbjct: 775 HSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKC-------CEINDLDKVI- 826

Query: 573 KQKESANLDAMCSQDDKDVQEA------GRTDNQIIKVFGQLVAEKAGQGKKENRCR-QE 625
               + N++      DKD Q+A       R  +Q   VF   + +K      +  C   +
Sbjct: 827 --DLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMK 884

Query: 626 ILCILGVFQKMHKLKIKPNVVTFS-------AILNACSRCNSFEDASMLLEEL 671
            +C +G  Q   KLK +   +  S       A++   + C   E+A  +L+ +
Sbjct: 885 RMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRM 937



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 161/357 (45%), Gaps = 1/357 (0%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            +  I  L + G+   A  +F+    +G    + A +++   Y R G    A S+ +  + 
Sbjct: 670  TCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRN 729

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             N+ PNL T+N ++    +G  D     ++++ M R+G  P+R+T++SL+      G+ E
Sbjct: 730  KNVIPNLTTFNILLHGYSRGQ-DIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLE 788

Query: 317  AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
                +    +      D  T+N L+   C+   +D   ++   M    +S +  T   + 
Sbjct: 789  LGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVT 848

Query: 377  DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            D   +     +      EM   G       Y T++    ++G  + A  +  +M + GI 
Sbjct: 849  DVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGIS 908

Query: 437  KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             D     A++ G    GK +E   + ++M      P   T++TL+ V+ K   +KEA  +
Sbjct: 909  LDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL 968

Query: 497  FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
                +   +K D+V Y+ LI A C NG V +A+   +E+ ++G+ PN+ TY  ++ A
Sbjct: 969  KILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSA 1025


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/501 (27%), Positives = 243/501 (48%), Gaps = 35/501 (6%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           LG V+LA  +F+  +  G    V  FS LI+   + G  ++A  ++  MK   ++PN+  
Sbjct: 338 LGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFI 397

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
            N++++   +  +  +H   +FD+ + +G+  + +T+N LL      G    A NL+ +M
Sbjct: 398 VNSLLEGFHEQNL-LEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKM 455

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V +GI   + +YN L+   CK   MD A+ ++  +  + + PN VTY+ +IDG+ K G  
Sbjct: 456 VSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDS 515

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           + A  +F +M    I     ++NTV++   K GR  E           G    ++TYN++
Sbjct: 516 ERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSI 575

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G+ K+G  D     + +M    +SP+++TY++LID   K      A+++  + K  G+
Sbjct: 576 IDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGM 635

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           K DVV YSALID  CK   +ESA     E+   G+ PN V YNS+I  F      E  + 
Sbjct: 636 KLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAAL- 694

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
           ++ +++ K K   +L    S                  + G L+ E    GK        
Sbjct: 695 NLHQEMIKNKVPCDLQVYTS------------------IIGGLLKE----GK-------- 724

Query: 626 ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGL 685
           +   L ++ +M    I P++V ++ ++N  S     E+AS +L+E+   +     + + +
Sbjct: 725 LSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNI 784

Query: 686 LMG--YRDNIWVQALSLFDEV 704
           L+   +R+    +A  L DE+
Sbjct: 785 LIAGNFREGNLQEAFRLHDEM 805



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 201/397 (50%), Gaps = 7/397 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILG--RLGKVDLAKNIF 216
           Y  LL+ LG  G+ ++A   +   V     K     L S    ILG  + G +D A ++ 
Sbjct: 432 YNILLKWLGELGKVNEACNLWEKMVS----KGITPSLVSYNNLILGHCKKGCMDKAYSML 487

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           ++ L  G       ++ LI  + + G  + A  VF  M   N+ P   T+N VI+  GK 
Sbjct: 488 KSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKT 547

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G       +  ++ ++ G     IT+NS++    + G  ++A   + EM   GI  D+ T
Sbjct: 548 G-RVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVIT 606

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y +L+D +CK  ++ LA E+ ++M  K +  +VV YS +IDG+ K   ++ A   F+E+ 
Sbjct: 607 YTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELL 666

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
            +G+  + V YN+++S +  L   E AL + +EM  + +  D   Y +++GG  K+GK  
Sbjct: 667 DIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLS 726

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
               ++ +M +  + P+++ Y+ LI+  S  G  + A +I +E     +   V++Y+ LI
Sbjct: 727 LALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILI 786

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
               + G ++ A  L DEM  +G+ P+  TY+ +++ 
Sbjct: 787 AGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 203/440 (46%), Gaps = 51/440 (11%)

Query: 233 ALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLR 292
            L+   GR G+  ++  VFN    Y LK + V  N + DA           VE F  ML 
Sbjct: 136 CLLECSGRYGFESDS-RVFN----YLLK-SFVRVNKITDA-----------VECFRTMLE 178

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
           + + P     N+LL    R  +   AR L++EMV RGI  D +T + ++ A  K  + + 
Sbjct: 179 HDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEE 238

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
             +   E   + +  +   YS ++    +   L+ A  +  EM+  G    + +Y  V+ 
Sbjct: 239 VEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIV 298

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              K G F EAL +  EM S G+  + +   +L+ GY   G  +   ++F+++    V P
Sbjct: 299 ACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVP 358

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           +++ +S LI+  SK G  ++A +++   K  G++ +V + ++L++   +  L+E A  L 
Sbjct: 359 DVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLF 418

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCSQDDKDV 591
           DE  + GI  NVVTYN ++   G              +LGK  E+ NL + M S   K +
Sbjct: 419 DEAVEHGI-TNVVTYNILLKWLG--------------ELGKVNEACNLWEKMVS---KGI 460

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
             +  + N +I           G  KK   C  +   +L   + + +  +KPN VT++ +
Sbjct: 461 TPSLVSYNNLI----------LGHCKK--GCMDKAYSML---KSILERGLKPNAVTYTLL 505

Query: 652 LNACSRCNSFEDASMLLEEL 671
           ++   +    E A ++ E++
Sbjct: 506 IDGFFKKGDSERAFVVFEQM 525


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 255/510 (50%), Gaps = 14/510 (2%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
           G   +A QCF+   +   R   + +  +A +  L + GK DL+   F   +  G   +V+
Sbjct: 196 GMLEEAGQCFSRMTRF--RVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVF 253

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            ++ +I    + G    A S+F+ MK+  L P++VTYN++ID  GK G+       +F++
Sbjct: 254 TYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGL-LDESFCLFEE 312

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G +PD IT+N+L+    +      A +  +EM + G+  ++ TY+TL+DA+CK   
Sbjct: 313 MKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHM 372

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  A + + +M    +SPN  TY+++ID   KAG L DAL +  EM  + +G + V+Y T
Sbjct: 373 LQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTT 432

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +L    K GR  EA  + + M  +G+  +  TY AL+ G+ K  + +    + +++K   
Sbjct: 433 LLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKK 492

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + P+LL Y T+I         +E   +  E K  G++A+ V+Y+  +DA  K G    A+
Sbjct: 493 IKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEAL 552

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKE-----SANLDA 582
           +LL EM   G+   +VT+  +ID   +    E  +D   R  D   Q       +A +D 
Sbjct: 553 NLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDG 612

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA-GQGKKENRCRQEILCILGVFQKMHKLKI 641
           +C  +  +  +    + Q   +    +A  A   G  +++  QE    L +  +M +L +
Sbjct: 613 LCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQE---ALNIRSRMSELGM 669

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           + ++  +++++   S+ N  + A M L E+
Sbjct: 670 ELDLHAYTSLVWGLSQGNLVQQARMFLNEM 699



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 218/454 (48%), Gaps = 27/454 (5%)

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           + F  M R  V P   + N+ L   ++ G  + +   F +MV  GI Q +FTYN ++  +
Sbjct: 203 QCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYM 262

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK   M  A  +  +M    ++P++VTY+++IDGY K G LD++  +F EMK +G   D 
Sbjct: 263 CKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDV 322

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           ++YN +++ + K  +  +A     EM++SG++ + VTY+ L+    K+    +  +    
Sbjct: 323 ITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLD 382

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M+   +SPN  TY++LID   K G   +A+++  E  Q  +  +VV Y+ L+D LCK G 
Sbjct: 383 MRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGR 442

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD--- 581
           +  A  L   M K G+ PN+ TY +++    ++   E  ++ ++    K+ +   L    
Sbjct: 443 MMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGT 502

Query: 582 ---AMCSQDD--------KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
               +CSQ+          +++  G   N +I         K G+  +           L
Sbjct: 503 IIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEA----------L 552

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA--HGLLMG 688
            + Q+M  L ++  +VTF  +++   +    E+A      +  F+ Q   VA    L+ G
Sbjct: 553 NLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDG 612

Query: 689 YRDNIWVQAL-SLFDEVKLMDSSTASAFYNALTD 721
              N +++A   LFDE++  +       Y AL D
Sbjct: 613 LCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALID 646



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 217/477 (45%), Gaps = 35/477 (7%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+ S+   LG ++ A   F             + +A +    ++G    +   F  M   
Sbjct: 187 ALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGA 246

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            +  ++ TYN +I    K G D      +F  M + G+ PD +T+NSL+    + GL + 
Sbjct: 247 GIAQSVFTYNIMIGYMCKEG-DMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDE 305

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           +  LF EM   G + D+ TYN L++  CK  QM  AF  + EM    + PNVVTYST+ID
Sbjct: 306 SFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLID 365

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
              K   L  A+    +M+ +G+  +  +Y +++    K G   +AL +  EM    +  
Sbjct: 366 ALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGF 425

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + VTY  LL G  K+G+  E   +F  M    V+PNL TY+ L+  + K    + A+++ 
Sbjct: 426 NVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELL 485

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           +E K+  +K D++LY  +I  LC    +E    ++ EM   GIR N V Y   +DA+ ++
Sbjct: 486 KEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKT 545

Query: 558 ATTECTVDDVERDLGKQKESAN-LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
                         GK  E+ N L  MC   D  V+         I  F  L+     +G
Sbjct: 546 --------------GKTVEALNLLQEMC---DLGVEVT-------IVTFCVLIDGLCKKG 581

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKP-NVVTFSAILNACSRCNSFEDASMLLEELR 672
             E          +  F +M    ++P NV   +A+++   + N  E A  L +E++
Sbjct: 582 LVEEA--------IDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQ 630



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 191/420 (45%), Gaps = 72/420 (17%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I   G+LG +D +  +FE   + G    V  ++ALI+ + +     +A    + MK 
Sbjct: 291 NSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKN 350

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             LKPN+VTY+ +IDA  K  +  +  ++   DM R G+ P+  T+ SL+    + G   
Sbjct: 351 SGLKPNVVTYSTLIDALCKEHM-LQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLS 409

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L +EM+   +  ++ TY TLLD +CK  +M  A ++   M    ++PN+ TY+ ++
Sbjct: 410 DALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALV 469

Query: 377 DGYAKAGRLDDALN-----------------------------------MFSEMKFLGIG 401
            G+ K  R+++AL                                    + SEMK  GI 
Sbjct: 470 HGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIR 529

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV--- 458
            + V Y   +  Y K G+  EAL + +EM   G+    VT+  L+ G  K+G  +E    
Sbjct: 530 ANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDY 589

Query: 459 ---------------------------------RRMFEQMKADCVSPNLLTYSTLIDVYS 485
                                            +++F++M+   + P+ + Y+ LID   
Sbjct: 590 FARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNL 649

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K   ++EA+ I     + G++ D+  Y++L+  L +  LV+ A   L+EM  +GI P+ +
Sbjct: 650 KHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEI 709



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/414 (23%), Positives = 171/414 (41%), Gaps = 74/414 (17%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+   +  ++  A +      N G    V  +S LI A  +    Q+AI     M+R
Sbjct: 326 NALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRR 385

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             L PN  TY ++IDA  K G      +++ D+ML+  V  + +T+ +LL  +C  G + 
Sbjct: 386 VGLSPNEFTYTSLIDANCKAGY-LSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMM 444

Query: 316 EAARNLFNEMVHRGIDQ-----------------------------------DIFTYNTL 340
           EA  +LF  M+  G+                                     D+  Y T+
Sbjct: 445 EA-EDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTI 503

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +  +C   +++    +M+EM A  I  N V Y+  +D Y K G+  +ALN+  EM  LG+
Sbjct: 504 IWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGV 563

Query: 401 GLDRVSYNTVLSIYAKLGRFEEAL----------------LVCK---------------- 428
            +  V++  ++    K G  EEA+                 VC                 
Sbjct: 564 EVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAK 623

Query: 429 ----EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
               EM+   +  D + Y AL+ G  K   + E   +  +M    +  +L  Y++L+   
Sbjct: 624 KLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGL 683

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           S+G L ++A     E    G+  D +L   L+    + G ++ A+ L DE+ K+
Sbjct: 684 SQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLKK 737


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/360 (32%), Positives = 196/360 (54%), Gaps = 4/360 (1%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            SA I  L + G+V  A  +F     +G    V+ +S+LIS + + G  ++A  + + M 
Sbjct: 616 CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMC 675

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
              + PN+  YNA++D   K G D +   ++FD M   G++PD +T+++++   C    +
Sbjct: 676 LKGIAPNIFIYNALVDGLCKSG-DIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENV 734

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA  +LF+EM  +G+    F YN L+   CK   M+ A  +  EM  K  +   ++++T
Sbjct: 735 AEAF-SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNT 792

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDGY K+ ++ +A  +F EM    I  D V+Y TV+  + K G+ EEA L+ KEM+   
Sbjct: 793 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERN 852

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  D VTY +L+ GY K G+  EV  +FE+M A  V P+ +TY  +I  + K     EA 
Sbjct: 853 LIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAF 912

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++  E    G+     ++  LI ALCK   +  A  LLDEM + G++P++   N+++ +F
Sbjct: 913 KLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSF 972



 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 247/497 (49%), Gaps = 50/497 (10%)

Query: 202  ILG--RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
            ILG  + GK+  A   F+  L+ G       ++ LI+ + ++G   EA+S+F  +    +
Sbjct: 550  ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGV 609

Query: 260  KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
             P++ T +A I    K G   +  +++F ++   G+ PD  T++SL++   + G  E A 
Sbjct: 610  LPDVQTCSAFIHGLLKNG-RVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 668

Query: 320  NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
             L +EM  +GI  +IF YN L+D +CK   +  A ++   MP K + P+ VTYSTMIDGY
Sbjct: 669  ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 728

Query: 380  AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
             K+  + +A ++F EM   G+      YN ++    K G  E+A+ + +EM   G     
Sbjct: 729  CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATT 787

Query: 440  VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
            +++N L+ GY K  K  E  ++F++M A  + P+ +TY+T+ID + K G  +EA  +F+E
Sbjct: 788  LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 847

Query: 500  FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY----------NS 549
             ++  L  D V Y++L+    K G      +L ++M  +G++P+ VTY          ++
Sbjct: 848  MQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDN 907

Query: 550  IIDAF-------GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI- 601
            +++AF       G+   T+ T+ D+            + A+C ++D  + EA +  +++ 
Sbjct: 908  LVEAFKLRDEVVGKGMLTKGTIHDLL-----------ITALCKRED--LTEASKLLDEMG 954

Query: 602  -------IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
                   +     LV      GK +   R        VF+ +  L + P+  T   ++N 
Sbjct: 955  ELGLKPSLAACNTLVRSFHEAGKMDEATR--------VFEGVKSLGLVPDTTTLIDLVNG 1006

Query: 655  CSRCNSFEDASMLLEEL 671
                   EDA  L+++L
Sbjct: 1007 NLNDTDSEDARNLIKQL 1023



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 250/566 (44%), Gaps = 44/566 (7%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R  +++ AK  FE     G      A SALI  + R G   E + + + M    +  N
Sbjct: 308 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPIN 367

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           L+TYN +I    K G   +   EI   M+  G +P+  TF  L+    R      A  L 
Sbjct: 368 LITYNVLIHGLCKFG-KMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELL 426

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           +EM  R +     +Y  +++ +C    + LA +++ +M    + PNVV YS +I  YA  
Sbjct: 427 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASE 486

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           GR+++A  +   M   G+  D   YN ++S  +K G+ EEA     E++  G++ DAVT+
Sbjct: 487 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 546

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
            A + GY K GK  E  + F++M    + PN   Y+ LI+ + K G   EA+ IFR    
Sbjct: 547 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHA 606

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
            G+  DV   SA I  L KNG V+ A+ +  E+ ++G+ P+V TY+S+I  F       C
Sbjct: 607 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF-------C 659

Query: 563 TVDDVERDLGKQKE-------------SANLDAMCSQDD--------KDVQEAGRTDNQI 601
              +VE+      E             +A +D +C   D          + E G   + +
Sbjct: 660 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 719

Query: 602 IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
              +  ++    G  K EN           +F +M    ++P+   ++A+++ C +    
Sbjct: 720 --TYSTMI---DGYCKSENVAEA-----FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 769

Query: 662 EDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALS-LFDEVKLMDSSTASAFYNALT 720
           E A  L  E+           + L+ GY  +  +Q  S LF E+           Y  + 
Sbjct: 770 EKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 829

Query: 721 DMLWHF--GQKRGAQLVVLEGKRRQV 744
           D  WH   G+   A L+  E + R +
Sbjct: 830 D--WHCKAGKMEEANLLFKEMQERNL 853



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 148/561 (26%), Positives = 252/561 (44%), Gaps = 31/561 (5%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           AMI+ L     + LA  + E     G    V  +S LI AY   G  +EA  + + M   
Sbjct: 443 AMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCS 502

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            + P++  YNA+I    K G   +       ++   G++PD +TF + +   S+ G    
Sbjct: 503 GVAPDIFCYNAIISCLSKAG-KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 561

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A   F+EM+  G+  +   Y  L++   K   +  A  I   + A  + P+V T S  I 
Sbjct: 562 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIH 621

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K GR+ +AL +FSE+K  G+  D  +Y++++S + K G  E+A  +  EM   GI  
Sbjct: 622 GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 681

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +   YNAL+ G  K G     R++F+ M    + P+ +TYST+ID Y K     EA  +F
Sbjct: 682 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 741

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E    G++    +Y+AL+   CK G +E A++L  EM ++G     +++N++ID + +S
Sbjct: 742 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKS 800

Query: 558 ATTECTVDDVERDLGKQ------KESANLDAMCSQDD--------KDVQEAGRTDNQIIK 603
              +      +  + KQ        +  +D  C            K++QE     + +  
Sbjct: 801 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 860

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
                   K GQ  +          +  +F+KM    +KP+ VT+  ++ A  + ++  +
Sbjct: 861 TSLMYGYNKLGQSSE----------VFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVE 910

Query: 664 ASMLLEELRLFDNQVYGVAHGLL---MGYRDNIWVQALSLFDEVKLMDSSTASAFYNALT 720
           A  L +E+        G  H LL   +  R+++  +A  L DE+  +    + A  N L 
Sbjct: 911 AFKLRDEVVGKGMLTKGTIHDLLITALCKREDL-TEASKLLDEMGELGLKPSLAACNTLV 969

Query: 721 DMLWHFGQKRGAQLVVLEGKR 741
              +H   K      V EG +
Sbjct: 970 RS-FHEAGKMDEATRVFEGVK 989



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 234/487 (48%), Gaps = 20/487 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+IS L + GK++ A          G       F A I  Y ++G   EA   F+ M  
Sbjct: 512 NAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLD 571

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           + L PN   Y  +I+   K G +    + IF  +   GV PD  T ++ +    + G  +
Sbjct: 572 HGLMPNNPLYTVLINGHFKAG-NLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQ 630

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +F+E+  +G+  D+FTY++L+   CK  +++ AFE+  EM  K I+PN+  Y+ ++
Sbjct: 631 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 690

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  K+G +  A  +F  M   G+  D V+Y+T++  Y K     EA  +  EM S G++
Sbjct: 691 DGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ 750

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             +  YNAL+ G  K+G  ++   +F +M     +  L +++TLID Y K    +EA Q+
Sbjct: 751 PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQL 809

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F+E     +  D V Y+ +ID  CK G +E A  L  EM +  +  + VTY S++  + +
Sbjct: 810 FQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNK 869

Query: 557 SATTECTVDDVERDLGKQKESANLD------AMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
              +       E+ + K  +   +       A C +D  ++ EA +  ++++   G L  
Sbjct: 870 LGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKED--NLVEAFKLRDEVVGK-GMLTK 926

Query: 611 EKAGQGKKENRCRQEILCILG-VFQKMHKLKIKPNVVTFSAILNAC-SRCNSFEDASMLL 668
                      C++E L     +  +M +L +KP+       L AC +   SF +A  + 
Sbjct: 927 GTIHDLLITALCKREDLTEASKLLDEMGELGLKPS-------LAACNTLVRSFHEAGKMD 979

Query: 669 EELRLFD 675
           E  R+F+
Sbjct: 980 EATRVFE 986



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 145/541 (26%), Positives = 255/541 (47%), Gaps = 52/541 (9%)

Query: 225 GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVV 284
           G++   F  LI +Y R G   EA +VF   K  ++  +L+  N+++    K G+  +   
Sbjct: 155 GSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGM-MELFW 213

Query: 285 EIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           ++++ ML   +  D  T+  L+ A+C  G L  A R L  EM  +G++ + F Y+ +++ 
Sbjct: 214 KVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLI-EMDEKGLNPNEFIYSLVIEG 272

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +C+   +D A E+   M  K + PN  TY+ +  G  +A R+++A   F EM+  G+  D
Sbjct: 273 MCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPD 332

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             + + ++  + + G  +E L +   M S GI  + +TYN L+ G  K GK ++   + +
Sbjct: 333 YNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILK 392

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
            M      PN  T+  LI+ Y +      A+++  E ++  L    V Y A+I+ LC   
Sbjct: 393 GMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK 452

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
            +  A  LL++MT  G++PNVV Y+ +I A+     +E  +++  R          LD M
Sbjct: 453 DLSLANKLLEKMTFSGLKPNVVVYSILIMAYA----SEGRIEEARR---------LLDGM 499

Query: 584 -CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
            CS    D+       N II         KAG+ ++ +    EI              +K
Sbjct: 500 SCSGVAPDI----FCYNAIISCL-----SKAGKMEEASTYLLEI----------QGRGLK 540

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVYGVAHGLLMG-YRDNIWVQA 697
           P+ VTF A +   S+     +A+   +E+     + +N +Y V   L+ G ++    ++A
Sbjct: 541 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV---LINGHFKAGNLMEA 597

Query: 698 LSLFDEVK----LMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESC 753
           LS+F  +     L D  T SAF +     L   G+ + A  V  E K + +  +V++ S 
Sbjct: 598 LSIFRRLHALGVLPDVQTCSAFIHG----LLKNGRVQEALKVFSELKEKGLVPDVFTYSS 653

Query: 754 L 754
           L
Sbjct: 654 L 654



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 169/343 (49%), Gaps = 4/343 (1%)

Query: 195  LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
            + +A++  L + G +  A+ +F+    +G       +S +I  Y +S    EA S+F+ M
Sbjct: 685  IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 744

Query: 255  KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGG 313
                ++P+   YNA++  C K G D +  + +F +ML+ G     ++FN+L+   C    
Sbjct: 745  PSKGVQPHSFVYNALVHGCCKEG-DMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCK 802

Query: 314  LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            + EA++ LF EM+ + I  D  TY T++D  CK  +M+ A  +  EM  +N+  + VTY+
Sbjct: 803  IQEASQ-LFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 861

Query: 374  TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +++ GY K G+  +   +F +M   G+  D V+Y  V+  + K     EA  +  E+   
Sbjct: 862  SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 921

Query: 434  GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            G+      ++ L+    K+    E  ++ ++M    + P+L   +TL+  + + G   EA
Sbjct: 922  GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEA 981

Query: 494  MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
             ++F   K  GL  D      L++    +   E A +L+ ++ 
Sbjct: 982  TRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 193/359 (53%), Gaps = 3/359 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++ A  +    L  G   T    + LI+ Y + G  ++A+           +P+ +TY
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N  ++  C    V   H +++ D M++ G  PD  T+N ++    + G  E A+ + N+M
Sbjct: 290 NTFVNGLCQNDHV--GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V RG   DI T+NTL+ A+C G +++ A ++  ++  K +SP+V T++ +I+   K G  
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             AL +F EMK  G   D V+YNT++     LG+  +AL + K+MES+G  +  +TYN +
Sbjct: 408 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K+ + +E   +F+QM    +S N +T++TLID   K     +A ++  +    GL
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           + + + Y++++   CK G ++ A  +L+ MT  G   +VVTY ++I+   ++  T+  +
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 189/361 (52%), Gaps = 1/361 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +I+   +LG+V+ A    +  + +G+      ++  ++   ++ +   A+ V + M 
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           +    P++ TYN V++   K G   +    I + M+  G  PD  TFN+L+A    G   
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNG-QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A +L  ++  +G+  D++T+N L++A+CK     LA  +  EM     +P+ VTY+T+
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID     G+L  AL++  +M+  G     ++YNT++    K  R EEA  V  +M+  GI
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
            ++A+T+N L+ G  K  K D+   +  QM ++ + PN +TY++++  Y K G  K+A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I       G + DVV Y  LI+ LCK G  + A+ +L  M  +G+RP    YN ++ +  
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 556 R 556
           R
Sbjct: 613 R 613



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 179/347 (51%), Gaps = 1/347 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + +  + EG+   V+ ++ +++   ++G  +EA  + N M      P++ T+N +I 
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           A   G    +  +++   +   GV PD  TFN L+    + G    A  LF EM + G  
Sbjct: 365 ALCTGN-RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 423

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  TYNTL+D +C   ++  A +++ +M +     + +TY+T+IDG  K  R+++A  +
Sbjct: 424 PDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEV 483

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F +M   GI  + +++NT++    K  + ++A  +  +M S G++ + +TYN++L  Y K
Sbjct: 484 FDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK 543

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           QG   +   + E M A+    +++TY TLI+   K G  + A+++ R  +  G++     
Sbjct: 544 QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKA 603

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           Y+ ++ +L +   +  A+SL  EM + G  P+ +TY  +     R  
Sbjct: 604 YNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG 650



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 228/477 (47%), Gaps = 36/477 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++  L R  +V  A  + E   + G       F+ L+  +   G  + A+ V   M  
Sbjct: 185 NTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
                  VT N +I+  C  G V+    +      + +G +PD+IT+N+ +  +C    +
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVE--DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             A + + + MV  G D D+FTYN +++ +CK  Q++ A  I+ +M  +   P++ T++T
Sbjct: 303 GHALK-VMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I       RL++AL++  ++   G+  D  ++N +++   K+G    AL + +EM++SG
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D VTYN L+      GK  +   + + M++     + +TY+T+ID   K    +EA 
Sbjct: 422 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++F +    G+  + + ++ LID LCK+  ++ A  L+++M  EG++PN +TYNSI+   
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL--- 538

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
               T  C   D+       K++A++    + +  +V          +  +G L+     
Sbjct: 539 ----THYCKQGDI-------KKAADILETMTANGFEVD---------VVTYGTLINGLCK 578

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            G+ +          L V + M    ++P    ++ +L +  R N+  DA  L  E+
Sbjct: 579 AGRTQ--------VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 188/358 (52%), Gaps = 4/358 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +++ L + G+++ AK I    ++ G    +  F+ LI+A       +EA+ +   +    
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
           + P++ T+N +I+A  K G D    + +F++M  +G  PD +T+N+L+  +CS G L +A
Sbjct: 387 VSPDVYTFNILINALCKVG-DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
             +L  +M   G  +   TYNT++D +CK  +++ A E+  +M  + IS N +T++T+ID
Sbjct: 446 L-DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K  ++DDA  + ++M   G+  + ++YN++L+ Y K G  ++A  + + M ++G   
Sbjct: 505 GLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D VTY  L+ G  K G+     ++   M+   + P    Y+ ++    +    ++A+ +F
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624

Query: 498 REFKQAGLKADVVLYSALIDALCK-NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           RE  + G   D + Y  +   LC+  G ++ A   + EM  +G  P   ++  + +  
Sbjct: 625 REMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 138/557 (24%), Positives = 246/557 (44%), Gaps = 60/557 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKR- 256
           +I  LG +G +DL K +      EG+   +    + + +Y       +A+  + N ++  
Sbjct: 80  IIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL 139

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           + ++ + V YN +++   +G    K +  ++ +M   G++PD +TFN+L+    R     
Sbjct: 140 FGIQADTVVYNHLLNVLVEGS-KMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +  EM  RG+  D  T+ TL+    +   ++ A  + A M     S   VT + +I
Sbjct: 199 TAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY K GR++DAL    +    G   D+++YNT ++   +      AL V   M   G  
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  TYN ++    K G+ +E + +  QM      P++ T++TLI     G   +EA+ +
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            R+    G+  DV  ++ LI+ALCK G    A+ L +EM   G  P+ VTYN++ID    
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL-- 436

Query: 557 SATTECTVDDVER--DLGKQKESAN-----------LDAMCSQ----------DDKDVQE 593
                C++  + +  DL K  ES             +D +C +          D  D+Q 
Sbjct: 437 -----CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 594 AGRT-------------DNQIIKVFGQLVAEKAGQGKKENR----------CRQ-EILCI 629
             R              D +I   F +L+ +   +G + N           C+Q +I   
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAF-ELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG- 688
             + + M     + +VVT+  ++N   +    + A  +L  +R+   +    A+  ++  
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 610

Query: 689 -YRDNIWVQALSLFDEV 704
            +R N    ALSLF E+
Sbjct: 611 LFRRNNIRDALSLFREM 627



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 167/406 (41%), Gaps = 53/406 (13%)

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE- 394
            Y  ++  +     +DL   ++AEM  +     +    + +D Y      DDA+++    
Sbjct: 76  VYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQ 135

Query: 395 -MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
                GI  D V YN +L++  +  + +    V  EM + GI+ D VT+N L+    +  
Sbjct: 136 LQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAH 195

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           +      M E+M +  V+P+  T++TL+  + + G  + A+++     + G  A  V  +
Sbjct: 196 QVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVN 255

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            LI+  CK G VE A+  + +   +G  P+ +TYN+ ++         C  D V   L  
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL-------CQNDHVGHAL-- 306

Query: 574 QKESANLDAMCSQD-DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
                 +D M  +  D DV       N + K  GQL   K                  G+
Sbjct: 307 ----KVMDVMVQEGHDPDVFTYNIVVNCLCK-NGQLEEAK------------------GI 343

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDN 692
             +M      P++ TF+ ++ A    N  E+A  L  ++      V GV+  +   Y  N
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV-----TVKGVSPDV---YTFN 395

Query: 693 IWVQALS----------LFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           I + AL           LF+E+K    +     YN L D L   G+
Sbjct: 396 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 198/406 (48%), Gaps = 41/406 (10%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +I    RLGK   A  I E     G    V  ++ +IS Y ++G    A+SV +   
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD--- 196

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
           R ++ P++VTYN ++ +    G   K  +E+ D ML+    PD IT+  L+ A C   G+
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSG-KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             A + L +EM  RG   D+ TYN L++ ICK  ++D A + + +MP+    PNV+T++ 
Sbjct: 256 GHAMK-LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314

Query: 375 MIDGYAKAGRLDDALNMFSEM----------------------KFLGIGLD--------- 403
           ++      GR  DA  + ++M                        LG  +D         
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374

Query: 404 ----RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
                +SYN +L  + K  + + A+   + M S G   D VTYN +L    K GK ++  
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +  Q+ +   SP L+TY+T+ID  +K G   +A+++  E +   LK D + YS+L+  L
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
            + G V+ A+    E  + GIRPN VT+NSI+    +S  T+  +D
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 184/349 (52%), Gaps = 3/349 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A  + +  L       V  ++ LI A  R      A+ + + M+     P++VTY
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +++  C +G +D    ++  +DM  +G QP+ IT N +L      G W  A  L  +M
Sbjct: 278 NVLVNGICKEGRLD--EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           + +G    + T+N L++ +C+   +  A +I+ +MP     PN ++Y+ ++ G+ K  ++
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D A+     M   G   D V+YNT+L+   K G+ E+A+ +  ++ S G     +TYN +
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K GK  +  ++ ++M+A  + P+ +TYS+L+   S+ G   EA++ F EF++ G+
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + + V +++++  LCK+   + A+  L  M   G +PN  +Y  +I+  
Sbjct: 516 RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 218/449 (48%), Gaps = 37/449 (8%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G+++      E  +  G    +   + LI  + R G  ++A  +   ++     P+++
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFN 323
           TYN +I    K G +  + + + D M    V PD +T+N++L ++C  G L +A   + +
Sbjct: 174 TYNVMISGYCKAG-EINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME-VLD 228

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
            M+ R    D+ TY  L++A C+ + +  A +++ EM  +  +P+VVTY+ +++G  K G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           RLD+A+   ++M   G   + +++N +L      GR+ +A  +  +M   G     VT+N
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+    ++G       + E+M      PN L+Y+ L+  + K      A++        
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           G   D+V Y+ ++ ALCK+G VE AV +L++++ +G  P ++TYN++ID   ++  T   
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT--- 465

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
                      K    LD M ++D K         + I   +  LV   + +GK +    
Sbjct: 466 ----------GKAIKLLDEMRAKDLKP--------DTI--TYSSLVGGLSREGKVDE--- 502

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAIL 652
                 +  F +  ++ I+PN VTF++I+
Sbjct: 503 -----AIKFFHEFERMGIRPNAVTFNSIM 526



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 179/383 (46%), Gaps = 40/383 (10%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +LR L + G+  +A++     ++R+   +      + +I    R   V  A  + + 
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI--TYTILIEATCRDSGVGHAMKLLDE 264

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
             + G    V  ++ L++   + G   EAI   N M     +PN++T+N ++ + C  G 
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG- 323

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             +    ++  DMLR G  P  +TFN L+    R GL   A ++  +M   G   +  +Y
Sbjct: 324 -RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N LL   CK  +MD A E +  M ++   P++VTY+TM+    K G+++DA+ + +++  
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G     ++YNTV+   AK G+  +A+ +  EM +  ++ D +TY++L+GG  ++GK DE
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502

Query: 458 VRRMFEQMKADCVSPNLLT-----------------------------------YSTLID 482
             + F + +   + PN +T                                   Y+ LI+
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562

Query: 483 VYSKGGLYKEAMQIFREFKQAGL 505
             +  G+ KEA+++  E    GL
Sbjct: 563 GLAYEGMAKEALELLNELCNKGL 585



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 186/401 (46%), Gaps = 27/401 (6%)

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +  ++M+ +G  PD I   +L+    R G    A  +   +   G   D+ TYN ++   
Sbjct: 123 KFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGY 182

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK  +++ A  ++  M   ++SP+VVTY+T++     +G+L  A+ +   M       D 
Sbjct: 183 CKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           ++Y  ++    +      A+ +  EM   G   D VTYN L+ G  K+G+ DE  +    
Sbjct: 240 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M +    PN++T++ ++      G + +A ++  +  + G    VV ++ LI+ LC+ GL
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ------KESA 578
           +  A+ +L++M + G +PN ++YN ++  F +    +  ++ +ER + +         + 
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419

Query: 579 NLDAMCSQDDKDVQEAGRTDNQ--------IIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
            L A+C   D  V++A    NQ        ++  +  ++   A  GK            +
Sbjct: 420 MLTALCK--DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK--------AI 469

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            +  +M    +KP+ +T+S+++   SR    ++A     E 
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 38/264 (14%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ +    L +G+  +V  F+ LI+   R G    AI +   M ++  +PN ++YN ++ 
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
             C +  +D    +E  + M+  G  PD +T+N++L    + G  E A  + N++  +G 
Sbjct: 388 GFCKEKKMD--RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN-------------------------- 364
              + TYNT++D + K  +   A +++ EM AK+                          
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505

Query: 365 ---------ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
                    I PN VT+++++ G  K+ + D A++    M   G   +  SY  ++   A
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565

Query: 416 KLGRFEEALLVCKEMESSGIRKDA 439
             G  +EAL +  E+ + G+ K +
Sbjct: 566 YEGMAKEALELLNELCNKGLMKKS 589


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 185/357 (51%), Gaps = 3/357 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI+   R  K+  A ++   AL  G+      FS LI+ +   G   EA+++ + M    
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            +PN+VT N +I+  C KG V     + + D M++ G + + IT+  +L    + G    
Sbjct: 170 YRPNVVTVNTLINGLCLKGRV--TEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTAL 227

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A +LF +M  R I   +  Y+ ++D++CK   +D A  +  EM  K I  +VV YS++I 
Sbjct: 228 ALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIG 287

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G    GR DD   M  EM    I  + V+++ ++ ++ K G+  EA  +  EM + GI  
Sbjct: 288 GLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAP 347

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D +TY++L+ G+ K+ +  E  +M + M +    PN++TYS LI+ Y K       M++F
Sbjct: 348 DTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLF 407

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            E    GL AD V Y+ L+   C++G +  A  L  EM   G+ P+VVTY  ++D  
Sbjct: 408 CEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGL 464



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 251/497 (50%), Gaps = 39/497 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S + S + R  + DL     +     G  + +Y  + +I+ + R      A SV     +
Sbjct: 73  SKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALK 132

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
           +  +PN +T++ +I+  C +G V     V + D M+    +P+ +T N+L+  +C +G +
Sbjct: 133 FGFEPNTITFSTLINGFCLEGRV--SEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRV 190

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA   L + MV  G + +  TY  +L+ +CK     LA ++  +M  ++I  +VV YS 
Sbjct: 191 TEALV-LIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSI 249

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +ID   K G LDDAL++F+EM+  GI  D V+Y++++      GR+++   + +EM    
Sbjct: 250 VIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRN 309

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I  + VT++AL+  + K+GK  E + ++ +M A  ++P+ +TYS+LID + K     EA 
Sbjct: 310 IIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEAN 369

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           Q+       G + ++V YS LI++ CK   V++ + L  E++ +G+  + VTYN+++  F
Sbjct: 370 QMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGF 429

Query: 555 GRSATTECTVDDVERDLGKQKESAN-----------LDAMCSQDDKDVQEAGRTDNQI-- 601
            +S        +V ++L ++  S             LD +C  D+ ++Q+A     ++  
Sbjct: 430 CQSGKL-----NVAKELFQEMVSRGVPPSVVTYGILLDGLC--DNGELQKALEIFEKMQK 482

Query: 602 ------IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
                 I ++  ++       K ++     + C L V        +KP+V+T++ ++   
Sbjct: 483 SRMILGIGIYNIIIHGMCNASKVDD--AWSLFCSLSV------KGVKPDVLTYNVMIGGL 534

Query: 656 SRCNSFEDASMLLEELR 672
            +  S  +A ML  +++
Sbjct: 535 CKKGSLSEADMLFRKMK 551



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 184/348 (52%), Gaps = 3/348 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G   LA ++F          +V  +S +I +  + G   +A+S+FN M+   +K ++V Y
Sbjct: 223 GNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAY 282

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           +++I   C  G  D     ++  +M+   + P+ +TF++L+ V  + G    A+ L+NEM
Sbjct: 283 SSIIGGLCNDGRWD--DGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEM 340

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V RGI  D  TY++L+D  CK  ++  A +++  M +K   PN+VTYS +I+ Y KA R+
Sbjct: 341 VARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRV 400

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D+ + +F E+   G+  D V+YNT++  + + G+   A  + +EM S G+    VTY  L
Sbjct: 401 DNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGIL 460

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           L G    G+  +   +FE+M+   +   +  Y+ +I          +A  +F      G+
Sbjct: 461 LDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGV 520

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           K DV+ Y+ +I  LCK G +  A  L  +M ++G  P+  TYN +I A
Sbjct: 521 KPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRA 568



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 200/402 (49%), Gaps = 9/402 (2%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVD 210
           C A++ T+  +L  +   G  + A+  F    K EER      +  S +I  L + G +D
Sbjct: 205 CEANEITYGPVLNRMCKSGNTALALDLFR---KMEERSIKASVVQYSIVIDSLCKDGNLD 261

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
            A ++F     +G    V A+S++I      G   +   +   M   N+ PN+VT++A+I
Sbjct: 262 DALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALI 321

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRG 329
           D   K G       E++++M+  G+ PD IT++SL+   C    L EA + + + MV +G
Sbjct: 322 DVFVKEG-KLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQ-MLDLMVSKG 379

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
            + +I TY+ L+++ CK  ++D    +  E+ +K +  + VTY+T++ G+ ++G+L+ A 
Sbjct: 380 CEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAK 439

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            +F EM   G+    V+Y  +L      G  ++AL + ++M+ S +      YN ++ G 
Sbjct: 440 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGM 499

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
               K D+   +F  +    V P++LTY+ +I    K G   EA  +FR+ K+ G     
Sbjct: 500 CNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSD 559

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             Y+ LI A      V S+V L++EM   G   +  T   ++
Sbjct: 560 CTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVV 601



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 211/465 (45%), Gaps = 71/465 (15%)

Query: 245 QEAISVFNSM----------------------KRYNL-------------KPNLVTYNAV 269
            EAI +F SM                      K Y+L             + N+ T N +
Sbjct: 51  NEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIM 110

Query: 270 IDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVH 327
           I+  C K  + F     +    L+ G +P+ ITF++L+   C  G + EA   L + MV 
Sbjct: 111 INCFCRKRKLLFAF--SVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVA-LVDRMVE 167

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
                ++ T NTL++ +C   ++  A  ++  M       N +TY  +++   K+G    
Sbjct: 168 MKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTAL 227

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           AL++F +M+   I    V Y+ V+    K G  ++AL +  EME  GI+ D V Y++++G
Sbjct: 228 ALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIG 287

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           G    G++D+  +M  +M    + PN++T+S LIDV+ K G   EA +++ E    G+  
Sbjct: 288 GLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAP 347

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           D + YS+LID  CK   +  A  +LD M  +G  PN+VTY+ +I+++ ++          
Sbjct: 348 DTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKA---------- 397

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
                 ++    +   C    K +     T N +++ F         Q  K N  ++   
Sbjct: 398 ------KRVDNGMRLFCEISSKGLVADTVTYNTLVQGF--------CQSGKLNVAKE--- 440

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
               +FQ+M    + P+VVT+  +L+        + A  + E+++
Sbjct: 441 ----LFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQ 481



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 147/281 (52%), Gaps = 2/281 (0%)

Query: 276 GGVDFK--HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G VD K    +++F+ M+++   P  I F+ L +  +R   ++       EM   GI+ +
Sbjct: 44  GIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHN 103

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++T N +++  C+  ++  AF ++         PN +T+ST+I+G+   GR+ +A+ +  
Sbjct: 104 MYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVD 163

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M  +    + V+ NT+++     GR  EAL++   M   G   + +TY  +L    K G
Sbjct: 164 RMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSG 223

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
                  +F +M+   +  +++ YS +ID   K G   +A+ +F E +  G+KADVV YS
Sbjct: 224 NTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYS 283

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++I  LC +G  +    +L EM    I PNVVT++++ID F
Sbjct: 284 SIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVF 324



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/315 (20%), Positives = 129/315 (40%), Gaps = 39/315 (12%)

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           +  EA+ + + M  S      + ++ L     ++ +YD V    ++M  + +  N+ T +
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            +I+ + +      A  +     + G + + + +S LI+  C  G V  AV+L+D M + 
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 539 GIRPNVVTYNSIIDAF---GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
             RPNVVT N++I+     GR       +D + +                         G
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVK------------------------YG 204

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
              N+I   +G ++      G             L +F+KM +  IK +VV +S ++++ 
Sbjct: 205 CEANEI--TYGPVLNRMCKSGNTA--------LALDLFRKMEERSIKASVVQYSIVIDSL 254

Query: 656 SRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTAS 713
            +  + +DA  L  E+ +   +   VA+  ++G    D  W     +  E+   +     
Sbjct: 255 CKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNV 314

Query: 714 AFYNALTDMLWHFGQ 728
             ++AL D+    G+
Sbjct: 315 VTFSALIDVFVKEGK 329


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/334 (32%), Positives = 186/334 (55%), Gaps = 2/334 (0%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE-IF 287
            F+ +I+   + G   +A  V + MK +   PN+VTYN +ID  C  G V   +  + I 
Sbjct: 232 TFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAIL 291

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            +M+ N V P+ +TFN L+    +     AA  +F EM  +G+   + TYN+L++ +C  
Sbjct: 292 KEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNE 351

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +++ A  ++ EM + N+ PNV+TY+ +I+GY K   L++A  +F  +   G+  + +++
Sbjct: 352 GKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITF 411

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           NT+L  Y K G+ EEA L+ K M   G   +A TYN L+ G+ ++GK +EV+ +  +M+ 
Sbjct: 412 NTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQC 471

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             V  + +TY+ LI  + +    K+A ++  E    GLK   + Y+ L++  C  G + +
Sbjct: 472 RGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRA 531

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           A++L  +M KEG   NVVTYN +I  + R    E
Sbjct: 532 ALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLE 565



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 201/358 (56%), Gaps = 6/358 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY---GRSGYCQEAISVFNS 253
           + +I+ L ++GK++ A ++ +     G+   V  ++ LI  Y   GR G   +A ++   
Sbjct: 234 NTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKE 293

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
           M    + PN VT+N +ID   K   +    +++F++M   G++P  +T+NSL+  +C+ G
Sbjct: 294 MVENKVSPNSVTFNVLIDGFCKDE-NLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEG 352

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            L EA + L +EM+   +  ++ TYN L++  CK   ++ A E+   +  + ++PNV+T+
Sbjct: 353 KLNEA-KVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITF 411

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T++ GY K G++++A  +   M   G   +  +YN ++  + + G+ EE   +  EM+ 
Sbjct: 412 NTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQC 471

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G++ D VTYN L+  + ++ +  +  R+ ++M    + P+ LTY+ L++ Y   G  + 
Sbjct: 472 RGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRA 531

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           A+ + ++ ++ G  A+VV Y+ LI   C+ G +E A  LL+EM ++G+ PN  TY  I
Sbjct: 532 ALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 226/457 (49%), Gaps = 50/457 (10%)

Query: 225 GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK----GGVDF 280
            N++ A   L+ AY  +      +  F     Y  K ++++ N ++ A  K    GGV+F
Sbjct: 158 ANSIIA-DMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEF 216

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
                ++ +M+R  + P+ ITFN+++    + G    A ++ ++M   G   ++ TYNTL
Sbjct: 217 -----VYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTL 271

Query: 341 LDAICKGAQMDLAFE---IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           +D  CK  ++   ++   I+ EM    +SPN VT++ +IDG+ K   L  AL +F EM+ 
Sbjct: 272 IDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQS 331

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+    V+YN++++     G+  EA ++  EM SS ++ + +TYNAL+ GY K+   +E
Sbjct: 332 QGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEE 391

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            R +F+ +    ++PN++T++TL+  Y K G  +EA  + +   + G   +   Y+ LI 
Sbjct: 392 ARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIV 451

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
             C+ G +E   +LL+EM   G++ + VTYN +I A+                   +K +
Sbjct: 452 GFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEP-------------KKAA 498

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVF---GQLVAEKAGQGKKENRCRQEILCILGVFQ 634
             +D M    DK ++ +  T N ++  +   G L A                   L + +
Sbjct: 499 RLIDEML---DKGLKPSHLTYNILLNGYCMEGNLRAA------------------LNLRK 537

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +M K     NVVT++ ++    R    EDA+ LL E+
Sbjct: 538 QMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEM 574



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 173/324 (53%), Gaps = 3/324 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           +GR+GK+  A  I +  +          F+ LI  + +      A+ VF  M+   LKP 
Sbjct: 278 MGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPT 337

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +VTYN++++  C +G ++   V  + D+ML + ++P+ IT+N+L+    +  L E AR L
Sbjct: 338 VVTYNSLVNGLCNEGKLNEAKV--LLDEMLSSNLKPNVITYNALINGYCKKKLLEEAREL 395

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F+ +  +G+  ++ T+NTLL   CK  +M+ AF +   M  K   PN  TY+ +I G+ +
Sbjct: 396 FDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCR 455

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G++++  N+ +EM+  G+  D V+YN ++S + +    ++A  +  EM   G++   +T
Sbjct: 456 EGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLT 515

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN LL GY  +G       + +QM+ +    N++TY+ LI  Y + G  ++A  +  E  
Sbjct: 516 YNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEML 575

Query: 502 QAGLKADVVLYSALIDALCKNGLV 525
           + GL  +   Y  + + + + G +
Sbjct: 576 EKGLIPNRTTYEIIKEEMMEKGFL 599



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 184/464 (39%), Gaps = 85/464 (18%)

Query: 339 TLLDAICKG---AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           ++LD+  KG     + L F  ++ + +     N +    ++  Y +  +    L  F   
Sbjct: 128 SILDSFVKGETNCSISLIFHSLS-VCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRA 186

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
                 L  +S N +LS   K   F     V KEM    I  + +T+N ++ G  K GK 
Sbjct: 187 GDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKL 246

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSK----GGLYK-------------------- 491
           ++   + + MK     PN++TY+TLID Y K    G +YK                    
Sbjct: 247 NKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTF 306

Query: 492 --------------EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
                          A+++F E +  GLK  VV Y++L++ LC  G +  A  LLDEM  
Sbjct: 307 NVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLS 366

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
             ++PNV+TYN++I+ + +    E    ++  ++GKQ                    G T
Sbjct: 367 SNLKPNVITYNALINGYCKKKLLE-EARELFDNIGKQ--------------------GLT 405

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK-MHKLKIKPNVVTFSAILNACS 656
            N I   F  L+      GK E            + QK M +    PN  T++ ++    
Sbjct: 406 PNVI--TFNTLLHGYCKFGKMEEA---------FLLQKVMLEKGFLPNASTYNCLIVGFC 454

Query: 657 RCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQ------ALSLFDEVKLMDSS 710
           R    E+   LL E++    +   V + +L+    + W +      A  L DE+      
Sbjct: 455 REGKMEEVKNLLNEMQCRGVKADTVTYNILI----SAWCEKKEPKKAARLIDEMLDKGLK 510

Query: 711 TASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
            +   YN L +     G  R A  +  + ++   W NV + + L
Sbjct: 511 PSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVL 554



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 5/185 (2%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           + GK++ A  + +  L +G+      ++ LI  + R G  +E  ++ N M+   +K + V
Sbjct: 420 KFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTV 479

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
           TYN +I A C K   + K    + D+ML  G++P  +T+N LL   C  G L  AA NL 
Sbjct: 480 TYNILISAWCEKK--EPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNL-RAALNLR 536

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            +M   G   ++ TYN L+   C+  +++ A  ++ EM  K + PN  TY  + +   + 
Sbjct: 537 KQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEK 596

Query: 383 GRLDD 387
           G L D
Sbjct: 597 GFLPD 601


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 239/493 (48%), Gaps = 42/493 (8%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           K  SA++  LG+    ++   + +   + G    VY F+  I   GR+G   EA  +F  
Sbjct: 228 KTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRR 287

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           M      P+LVTY  +IDA    G   ++  E+F  M  NG +PD++ + +LL   +  G
Sbjct: 288 MDDEGCGPDLVTYTVLIDALCNAG-QLENAKELFVKMKANGHKPDQVIYITLLDKFNDFG 346

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             +  +  +++M   G   D+ T+  L+D +CK    D AF     M  + I PN+ TY+
Sbjct: 347 DLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYN 406

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+I G  +AGR++DAL +   M+ +G+     +YN  +  + K G   +A+   ++M++ 
Sbjct: 407 TLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAK 466

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI  + V  NA L    + G+  E + MF  ++ + ++P+ +TY+ ++  YSK G   EA
Sbjct: 467 GIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEA 526

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           + +  E  + G + DV++ ++LID+L K G V+ A  + D M    + P VVTYN+++  
Sbjct: 527 VNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSG 586

Query: 554 FGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQIIKVFG 606
            G+    +  ++  E  + ++K S N       LD  C  D+ ++          +K+F 
Sbjct: 587 LGKEGRVQKAIELFE-SMIEKKCSPNTISFNTLLDCFCKNDEVELA---------LKMFS 636

Query: 607 QLVAEKAGQGKKENRCRQEIL----CILGVFQK---------MHKLK--IKPNVVTFSAI 651
           ++             C+ ++L     I G+ ++          H+LK  + P+ VT   +
Sbjct: 637 KMTVMD---------CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTL 687

Query: 652 LNACSRCNSFEDA 664
           L    +C    DA
Sbjct: 688 LPGLVKCGQIGDA 700



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 162/320 (50%), Gaps = 10/320 (3%)

Query: 247  AISVFNSM-KRYNLKPNLVTYNAVIDACGKGGVDFKHVVE----IFDDMLRNGVQPDRIT 301
            A  +F+   K+  + P L +YN +I     G +   H  E    +F DM   G  PD  T
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLI-----GELLEVHYTEKAWDLFKDMKNVGCAPDAFT 825

Query: 302  FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
            FN LLAV  + G       L+ EM+ R    D  TYN ++ ++ K   +D A +   ++ 
Sbjct: 826  FNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLV 885

Query: 362  AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            + +  P   TY  +IDG AK GRL++A+ +F EM   G   +   +N +++ Y K+G  E
Sbjct: 886  SSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTE 945

Query: 422  EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
             A  + K M + GIR D  +Y  L+      G+ DE    F ++K+  + P+ + Y+ +I
Sbjct: 946  TACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRII 1005

Query: 482  DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
            +   K    +EA+ ++ E +  G+  D+  Y++L+  L   G+VE A  + +E+   G+ 
Sbjct: 1006 NGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLE 1065

Query: 542  PNVVTYNSIIDAFGRSATTE 561
            P+V TYN++I  +  S   E
Sbjct: 1066 PDVFTYNALIRGYSLSENPE 1085



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 237/553 (42%), Gaps = 85/553 (15%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR-- 256
           M+  L    KV+    +FE    +     +  +  +  A    G  ++  +V N M++  
Sbjct: 128 MLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAG 187

Query: 257 -------YN--------------------------LKPNLVTYNAVIDACGKGGVDFKHV 283
                  YN                          LKP+L TY+A++ A GK   D + V
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR-DSEMV 246

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           + +  +M   G++P+  TF   + V  R G  + A  +F  M   G   D+ TY  L+DA
Sbjct: 247 MVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDA 306

Query: 344 ICKGAQMDLAFEIM-----------------------------------AEMPAKNISPN 368
           +C   Q++ A E+                                    ++M A    P+
Sbjct: 307 LCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPD 366

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           VVT++ ++D   KA   D+A   F  M+  GI  +  +YNT++    + GR E+AL +  
Sbjct: 367 VVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLG 426

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            MES G++  A TYN  +  +GK G+  +    FE+MKA  + PN++  +  +   ++ G
Sbjct: 427 TMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMG 486

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
             +EA  +F   ++ GL  D V Y+ ++    K G V+ AV+LL EM + G  P+V+  N
Sbjct: 487 RLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVN 546

Query: 549 SIIDAFGRSATTE--CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG 606
           S+ID+  ++   +    + D  +D+         + + S   K+    GR   + I++F 
Sbjct: 547 SLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKE----GRV-QKAIELFE 601

Query: 607 QLVAEKAGQGKKENRCRQEILC-------ILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
            ++ +K            +  C        L +F KM  +  KP+V+T++ ++    + N
Sbjct: 602 SMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKEN 661

Query: 660 SFEDASMLLEELR 672
               A     +L+
Sbjct: 662 KVNHAFWFFHQLK 674



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 128/526 (24%), Positives = 237/526 (45%), Gaps = 62/526 (11%)

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACG-KGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
           ++  +VF  M++  ++ +L TY  +  A   +GG+  + +  + + M + G   +  ++N
Sbjct: 139 EDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGL--RQMTTVLNKMRKAGFVLNAYSYN 196

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
            L+ +  + G    A  ++  MV  G+   + TY+ L+ A+ K    ++   ++ EM   
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
            + PNV T++  I    +AG++D+A  +F  M   G G D V+Y  ++      G+ E A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
             +  +M+++G + D V Y  LL  +   G  D  +  + QM+AD   P+++T++ L+DV
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K   + EA   F   ++ G+  ++  Y+ LI  L + G +E A+ LL  M   G++P 
Sbjct: 377 LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPT 436

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR------- 596
             TYN  ID FG+S  T   V+  E+ +  +    N+ A C+     + E GR       
Sbjct: 437 AYTYNIFIDYFGKSGETGKAVETFEK-MKAKGIVPNIVA-CNASLYSLAEMGRLREAKTM 494

Query: 597 --------------TDNQIIKVFGQLVAEKAGQGKK---------ENRCRQEILCI---- 629
                         T N ++K +      K GQ  +          N C  +++ +    
Sbjct: 495 FNGLRENGLAPDSVTYNMMMKCYS-----KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLI 549

Query: 630 ------------LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE---ELRLF 674
                         +F +M  +K+ P VVT++ +L+   +    + A  L E   E +  
Sbjct: 550 DSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCS 609

Query: 675 DNQVYGVAHGLLMGYRDNIWVQ-ALSLFDEVKLMDSSTASAFYNAL 719
            N +    + LL  +  N  V+ AL +F ++ +MD       YN +
Sbjct: 610 PNTI--SFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTV 653



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 163/325 (50%), Gaps = 1/325 (0%)

Query: 223  GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
            G   T+ +++ LI       Y ++A  +F  MK     P+  T+N ++   GK G     
Sbjct: 783  GISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSG-KITE 841

Query: 283  VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            + E++ +M+    +PD IT+N +++  ++    + A + F ++V         TY  L+D
Sbjct: 842  LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID 901

Query: 343  AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
             + K  +++ A  +  EM      PN   ++ +I+GY K G  + A  +F  M   GI  
Sbjct: 902  GLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRP 961

Query: 403  DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
            D  SY  ++      GR +EAL    E++S+G+  D + YN ++ G GK  + +E   ++
Sbjct: 962  DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1021

Query: 463  EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
             +M+   + P+L TY++L+      G+ ++A +++ E + AGL+ DV  Y+ALI     +
Sbjct: 1022 NEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLS 1081

Query: 523  GLVESAVSLLDEMTKEGIRPNVVTY 547
               E A ++   M  +G  PN+ TY
Sbjct: 1082 ENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 156/304 (51%), Gaps = 1/304 (0%)

Query: 212  AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
            A ++F+   N G     + F+ L++ +G+SG   E   ++  M     KP+ +TYN VI 
Sbjct: 807  AWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVIS 866

Query: 272  ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            +  K   +    ++ F D++ +  +P   T+  L+   ++ G  E A  LF EM   G  
Sbjct: 867  SLAKSN-NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK 925

Query: 332  QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
             +   +N L++   K    + A ++   M  + I P++ +Y+ ++D    AGR+D+AL  
Sbjct: 926  PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY 985

Query: 392  FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
            F+E+K  G+  D ++YN +++   K  R EEAL +  EM + GI  D  TYN+L+   G 
Sbjct: 986  FNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGL 1045

Query: 452  QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
             G  ++ +RM+E+++   + P++ TY+ LI  YS     + A  +++     G   ++  
Sbjct: 1046 AGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGT 1105

Query: 512  YSAL 515
            Y+ L
Sbjct: 1106 YAQL 1109



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 125/556 (22%), Positives = 235/556 (42%), Gaps = 84/556 (15%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL-----ASAMISILGRLGKVDLAK 213
           Y   +   G  GE  KA++ F       E+   +G +      +A +  L  +G++  AK
Sbjct: 440 YNIFIDYFGKSGETGKAVETF-------EKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
            +F      G       ++ ++  Y + G   EA+++ + M R   +P+++  N++ID+ 
Sbjct: 493 TMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSL 552

Query: 274 GKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
            K G VD     ++FD M    + P  +T+N+LL+   + G  + A  LF  M+ +    
Sbjct: 553 YKAGRVD--EAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSP 610

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           +  ++NTLLD  CK  +++LA ++ ++M   +  P+V+TY+T+I G  K  +++ A   F
Sbjct: 611 NTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFF 670

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE-MESSGIRKDAVTYNALLGGYGK 451
            ++K   +  D V+  T+L    K G+  +A+ + ++ M     R +   +  L+GG   
Sbjct: 671 HQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLV 729

Query: 452 QGKYDEVRRMFEQM------------------------------------KADCVSPNLL 475
           + + D+     E++                                    K   +SP L 
Sbjct: 730 EAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLA 789

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           +Y+ LI    +    ++A  +F++ K  G   D   ++ L+    K+G +     L  EM
Sbjct: 790 SYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEM 849

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
                +P+ +TYN +I +  +S            +L K      LD        D +   
Sbjct: 850 ISRRCKPDAITYNIVISSLAKS-----------NNLDKA-----LDFFYDLVSSDFRPTP 893

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
           RT       +G L+   A  G+ E   R        +F++M     KPN   F+ ++N  
Sbjct: 894 RT-------YGPLIDGLAKVGRLEEAMR--------LFEEMSDYGCKPNCAIFNILINGY 938

Query: 656 SRCNSFEDASMLLEEL 671
            +    E A  L + +
Sbjct: 939 GKIGDTETACQLFKRM 954



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/515 (22%), Positives = 216/515 (41%), Gaps = 70/515 (13%)

Query: 195  LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
            + +++I  L + G+VD A  +F+   +     TV  ++ L+S  G+ G  Q+AI +F SM
Sbjct: 544  VVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESM 603

Query: 255  KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
                  PN +++N ++D   K   + +  +++F  M     +PD +T+N+++    +   
Sbjct: 604  IEKKCSPNTISFNTLLDCFCKND-EVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK 662

Query: 315  WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE-MPAKNISPNVVTYS 373
               A   F+++  + +  D  T  TLL  + K  Q+  A  I  + M       N   + 
Sbjct: 663  VNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWE 721

Query: 374  TMIDGYAKAGRLDDALNMFSEM------------------------------------KF 397
             ++ G      +D A+    E+                                    K 
Sbjct: 722  DLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKK 781

Query: 398  LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            LGI     SYN ++    ++   E+A  + K+M++ G   DA T+N LL  +GK GK  E
Sbjct: 782  LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE 841

Query: 458  VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            +  ++++M +    P+ +TY+ +I   +K     +A+  F +   +  +     Y  LID
Sbjct: 842  LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID 901

Query: 518  ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
             L K G +E A+ L +EM+  G +PN   +N +I+ +G+   TE                
Sbjct: 902  GLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTE---------------- 945

Query: 578  ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
                  C    + V E  R D   +K +  LV      G+ +          L  F ++ 
Sbjct: 946  ----TACQLFKRMVNEGIRPD---LKSYTILVDCLCLAGRVDEA--------LYYFNELK 990

Query: 638  KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
               + P+ + ++ I+N   +    E+A  L  E+R
Sbjct: 991  STGLDPDFIAYNRIINGLGKSQRMEEALALYNEMR 1025



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 123/257 (47%), Gaps = 7/257 (2%)

Query: 142  LGDILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAM 199
            L ++ K+   + C  D   Y  ++  L       KA+  F   V  + R     +    +
Sbjct: 842  LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP--RTYGPL 899

Query: 200  ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
            I  L ++G+++ A  +FE   + G       F+ LI+ YG+ G  + A  +F  M    +
Sbjct: 900  IDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGI 959

Query: 260  KPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +P+L +Y  ++D  C  G VD    +  F+++   G+ PD I +N ++    +    E A
Sbjct: 960  RPDLKSYTILVDCLCLAGRVD--EALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEA 1017

Query: 319  RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
              L+NEM +RGI  D++TYN+L+  +     ++ A  +  E+    + P+V TY+ +I G
Sbjct: 1018 LALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077

Query: 379  YAKAGRLDDALNMFSEM 395
            Y+ +   + A  ++  M
Sbjct: 1078 YSLSENPEHAYTVYKNM 1094



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 11/221 (4%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISIL----GRLGKVDLAKN 214
            Y  L+  L   G   +A++ F      EE  +   K   A+ +IL    G++G  + A  
Sbjct: 896  YGPLIDGLAKVGRLEEAMRLF------EEMSDYGCKPNCAIFNILINGYGKIGDTETACQ 949

Query: 215  IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
            +F+  +NEG    + +++ L+     +G   EA+  FN +K   L P+ + YN +I+  G
Sbjct: 950  LFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLG 1009

Query: 275  KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
            K     +  + ++++M   G+ PD  T+NSL+      G+ E A+ ++ E+   G++ D+
Sbjct: 1010 KSQ-RMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDV 1068

Query: 335  FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            FTYN L+         + A+ +   M     +PN+ TY+ +
Sbjct: 1069 FTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109


>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
 gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
          Length = 677

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 246/488 (50%), Gaps = 30/488 (6%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V+  K IF+  + EG    + A+++L+ AY   G  +EA+++FN +K+  L+P++V+Y
Sbjct: 202 GQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSY 261

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
            ++++A G+     K   E+F+ M +N  +P+++++N+L+      G+ + A  L +EM 
Sbjct: 262 TSLLNAYGRSAQPEK-AREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEME 320

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             GI  D+ + +TLL A  +  Q+     I+    ++ I  N V Y++ I  Y   G  +
Sbjct: 321 KDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYE 380

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            AL +++ M+   +  D V+YN ++S  +KLG++ E+L   ++M  S +      Y++L+
Sbjct: 381 KALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLI 440

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
             Y KQGK  E    F  MK     P++LTY+TLI  Y+ GG +K A  +F+E +  G+ 
Sbjct: 441 YSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIP 500

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            D ++ S+L++A  K G  E  + L++ M K+ I  N  +Y  II          CT+  
Sbjct: 501 PDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEII--------ASCTMI- 551

Query: 567 VERDLGKQKESAN-LDAMCSQDDKD--------VQEAGRTDNQIIKVFGQLVAEKAGQGK 617
             RD     E    LD+  S             + + G+T+N ++K+F ++V   +  G 
Sbjct: 552 --RDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTEN-MMKLFYKMVTSCSTVGL 608

Query: 618 KENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                    L ++G       V Q M    + P +  F  +L    R N  + A+ + E+
Sbjct: 609 STYAVVLRNLLVVGKWRKYIEVLQWMEDSGVHPTLYMFQNVLPYIWRENGMDFAATMQEK 668

Query: 671 L-RLFDNQ 677
           +  L D Q
Sbjct: 669 ISSLRDKQ 676



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 179/328 (54%), Gaps = 3/328 (0%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +  +I  Y R     +A  +F  M+ +  KP+   YN++I A  + G  ++  + I +DM
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAG-QWRWAINIMEDM 72

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           LR  + P R T+N+++  C   G W+ A  L  +M   G+  D+ T+N +L A+  GAQ 
Sbjct: 73  LRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQY 132

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL--DRVSYN 408
             A      M   N++ +  T + +I    K G+  +A+ +F+ M+        D V+Y 
Sbjct: 133 SKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYT 192

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           +++  Y   G+ E    +   M + G++ + V YN+LLG Y  +G + E   +F  +K +
Sbjct: 193 SIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKN 252

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + P++++Y++L++ Y +    ++A ++F + K+   K + V Y+ALIDA    G+++ A
Sbjct: 253 GLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEA 312

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           V LL EM K+GI+P+VV+ ++++ A GR
Sbjct: 313 VGLLHEMEKDGIQPDVVSISTLLAACGR 340



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 221/495 (44%), Gaps = 34/495 (6%)

Query: 181 FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           F   +E R      + +++I    R G+   A NI E  L      T   ++ +I+A G 
Sbjct: 34  FFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGA 93

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
           +G  ++A+ +   M    + P+LVT+N V+ A  K G  +   +  F+ M    V  D  
Sbjct: 94  AGNWKKALELCKKMTENGVGPDLVTHNIVLSAL-KNGAQYSKAISYFEIMKGANVTSDTF 152

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGID--QDIFTYNTLLDAICKGAQMDLAFEIMA 358
           T N ++    + G    A  LFN M  R      D+ TY +++ + C   Q++    I  
Sbjct: 153 TLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFD 212

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
            M A+ + PN+V Y++++  YA  G   +AL +F+ +K  G+  D VSY ++L+ Y +  
Sbjct: 213 LMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSA 272

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           + E+A  V  +M+ +  + + V+YNAL+  YG  G   E   +  +M+ D + P++++ S
Sbjct: 273 QPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSIS 332

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           TL+    +         I    +  G+  + V Y++ I +    G  E A+ L   M + 
Sbjct: 333 TLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRES 392

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
            ++P+ VTYN +I    +              LGK  ES        +D  D + +   +
Sbjct: 393 NVKPDAVTYNILISGSSK--------------LGKYTESLRF----FEDMVDSKVSSTKE 434

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
                V+  L+     QGK               F  M K    P+V+T++ ++ A +  
Sbjct: 435 -----VYSSLIYSYIKQGKLSE--------AESTFSSMKKSGCFPDVLTYTTLIQAYNAG 481

Query: 659 NSFEDASMLLEELRL 673
             ++ A  L +E+ +
Sbjct: 482 GGWKRAWDLFKEMEV 496



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 76/340 (22%), Positives = 169/340 (49%), Gaps = 1/340 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +++  GR  ++   + I E A + G      A+++ I +Y   G  ++A+ ++ SM+ 
Sbjct: 332 STLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRE 391

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            N+KP+ VTYN +I    K G  +   +  F+DM+ + V   +  ++SL+    + G   
Sbjct: 392 SNVKPDAVTYNILISGSSKLG-KYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLS 450

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A + F+ M   G   D+ TY TL+ A   G     A+++  EM    I P+ +  S+++
Sbjct: 451 EAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLM 510

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           + + K G  +  L +   MK   I L++ SY  +++    +  ++ A  + + ++SS   
Sbjct: 511 EAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSS 570

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
               T N +L   GK GK + + ++F +M   C +  L TY+ ++      G +++ +++
Sbjct: 571 ISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEV 630

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
            +  + +G+   + ++  ++  + +   ++ A ++ ++++
Sbjct: 631 LQWMEDSGVHPTLYMFQNVLPYIWRENGMDFAATMQEKIS 670



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 108/254 (42%), Gaps = 40/254 (15%)

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  ++  Y +  + D+ R +F +M+     P+   Y++LI  +S+ G ++ A+ I  +  
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +A +      Y+ +I+A    G  + A+ L  +MT+ G+ P++VT+N ++ A    A   
Sbjct: 74  RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133

Query: 562 CTVDDVERDLGKQKES----ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
             +   E   G    S     N+   C        EA       I++F  +        +
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEA-------IELFNSM-------RE 179

Query: 618 KENRCRQEIL---------CILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
           +  +C  +++         CI G       +F  M    +KPN+V ++++L A      +
Sbjct: 180 RRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGA------Y 233

Query: 662 EDASMLLEELRLFD 675
               M  E L +F+
Sbjct: 234 ASRGMHREALAIFN 247


>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 695

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 191/362 (52%), Gaps = 1/362 (0%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           +L++ +I    + G  + A          G         A+ISA G SG   EA ++F  
Sbjct: 257 QLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEE 316

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           MK   LKP    YN ++    K G+  K    I  +M R+GV PD  T++ L+   S  G
Sbjct: 317 MKDNGLKPKTRAYNGLLKGYVKAGM-LKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAG 375

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            WE+AR +  EM    I  + + ++ +L +     +   +F+++ EM    + P+   Y+
Sbjct: 376 RWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYN 435

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            MID + K   LD A++ F +M   GI  D V++NT++  + K    E A  + +EM   
Sbjct: 436 VMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEK 495

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G      T+N ++  +G+Q ++D+V+ +   M++  + PN++TY+TLID+Y K G + +A
Sbjct: 496 GFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDA 555

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           ++   + K AGLK    +Y+ALI+A  + GL E AV+    M  + ++P+++  NS+I+A
Sbjct: 556 IECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINA 615

Query: 554 FG 555
           FG
Sbjct: 616 FG 617



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 190/380 (50%), Gaps = 34/380 (8%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+IS LG  G++  A+ IFE   + G      A++ L+  Y ++G  ++A  + + M+R 
Sbjct: 296 AVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERS 355

Query: 258 NLKPNLVTYNAVIDACGKGGV----------------------------------DFKHV 283
            + P+  TY+ +IDA    G                                   +++  
Sbjct: 356 GVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKS 415

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
            ++  +M  +GV+PDR  +N ++    +    + A + F++M+  GI  D  T+NTL+D 
Sbjct: 416 FQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDC 475

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            CK    + A E+  EM  K  SP V T++ MI+ + +  R DD   +   M+ LG+  +
Sbjct: 476 HCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPN 535

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V+Y T++ IY K GRF +A+   ++M+S+G++  +  YNAL+  Y ++G  ++    F 
Sbjct: 536 VVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFR 595

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
            M+AD + P+LL  ++LI+ + +     EA  + +  K+  LK DVV Y+ L+ AL +  
Sbjct: 596 LMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVD 655

Query: 524 LVESAVSLLDEMTKEGIRPN 543
                 S+ +EM   G  P+
Sbjct: 656 KFNKVPSVYEEMILAGCTPD 675



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 238/504 (47%), Gaps = 44/504 (8%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +S LI A GRS    EA   F   ++  L P  +TYNA+I+AC +   D +  + +   M
Sbjct: 157 YSILIHALGRSEKLYEA---FLLSQQQALSP--LTYNALINACARNN-DLEKAINLISRM 210

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAA--RNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            ++G   D + ++ ++    R    ++   + L++E+    ++ D+   N ++    K  
Sbjct: 211 RQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAG 270

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
             + A E +  + A  +SP   T   +I     +GR+ +A  +F EMK  G+     +YN
Sbjct: 271 DPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYN 330

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +L  Y K G  ++A  +  EME SG+  D  TY+ L+  Y   G+++  R + ++M+A+
Sbjct: 331 GLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEAN 390

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + PN   +S ++  Y   G ++++ Q+ +E K +G++ D   Y+ +ID   K   ++ A
Sbjct: 391 NIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHA 450

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           +   D+M  EGI+P+ VT+N++ID   ++            +L ++ E    + M    +
Sbjct: 451 MDTFDKMLSEGIQPDTVTWNTLIDCHCKA------------ELHERAEELFEEMM----E 494

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
           K       T N +I  FG            E     ++  ++G    M  L + PNVVT+
Sbjct: 495 KGFSPCVTTFNIMINSFG------------EQERWDDVKTLMG---NMRSLGLLPNVVTY 539

Query: 649 SAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKL 706
           + +++   +   F DA   LE+++    +     +  L+    +  +  QA++ F   +L
Sbjct: 540 TTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAF---RL 596

Query: 707 MDSSTASAFYNALTDMLWHFGQKR 730
           M + +      AL  ++  FG+ R
Sbjct: 597 MRADSLKPSLLALNSLINAFGEDR 620



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 155/291 (53%), Gaps = 5/291 (1%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y FS ++++Y   G  Q++  V   MK   ++P+   YN +ID  GK      H ++ FD
Sbjct: 397 YVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSC-LDHAMDTFD 455

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            ML  G+QPD +T+N+L+    +  L E A  LF EM+ +G    + T+N ++++  +  
Sbjct: 456 KMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQE 515

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           + D    +M  M +  + PNVVTY+T+ID Y K+GR  DA+    +MK  G+      YN
Sbjct: 516 RWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYN 575

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +++ YA+ G  E+A+   + M +  ++   +  N+L+  +G+  +  E   + + MK +
Sbjct: 576 ALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKEN 635

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL----KADVVLYSAL 515
            + P+++TY+TL+    +   + +   ++ E   AG     KA  +L SAL
Sbjct: 636 DLKPDVVTYTTLMKALIRVDKFNKVPSVYEEMILAGCTPDRKARAMLRSAL 686



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 215/460 (46%), Gaps = 34/460 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAI--SVFNSM 254
           +A+I+   R   ++ A N+      +GY +    +S +I +  RS      I   +++ +
Sbjct: 188 NALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEI 247

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           +   L+ ++   N +I    K G D    +E    +  +G+ P   T  ++++     G 
Sbjct: 248 QCDKLELDVQLSNDIIVGFAKAG-DPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGR 306

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A  +F EM   G+      YN LL    K   +  A  I++EM    +SP+  TYS 
Sbjct: 307 IIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSL 366

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +ID Y+ AGR + A  +  EM+   I  +   ++ +L+ Y   G ++++  V KEM++SG
Sbjct: 367 LIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSG 426

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +R D   YN ++  +GK    D     F++M ++ + P+ +T++TLID + K  L++ A 
Sbjct: 427 VRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAE 486

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++F E  + G    V  ++ +I++  +    +   +L+  M   G+ PNVVTY ++ID +
Sbjct: 487 ELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIY 546

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
           G+S      ++ +E                     D++ AG   +  +  +  L+   A 
Sbjct: 547 GKSGRFSDAIECLE---------------------DMKSAGLKPSSTM--YNALINAYAQ 583

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
           +G  E          +  F+ M    +KP+++  ++++NA
Sbjct: 584 KGLSEQ--------AVNAFRLMRADSLKPSLLALNSLINA 615



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 40/297 (13%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +LK+ E      + Y F  +L    +RGEW K+ Q     +K    + D+    + MI  
Sbjct: 383 VLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLK-EMKNSGVRPDR-HFYNVMIDT 440

Query: 203 LGRLGKVD-----------------------------------LAKNIFETALNEGYGNT 227
            G+   +D                                    A+ +FE  + +G+   
Sbjct: 441 FGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPC 500

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  F+ +I+++G      +  ++  +M+   L PN+VTY  +ID  GK G  F   +E  
Sbjct: 501 VTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSG-RFSDAIECL 559

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           +DM   G++P    +N+L+   ++ GL E A N F  M    +   +   N+L++A  + 
Sbjct: 560 EDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGED 619

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
            +   AF ++  M   ++ P+VVTY+T++    +  + +   +++ EM   G   DR
Sbjct: 620 RRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEEMILAGCTPDR 676


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 189/373 (50%), Gaps = 1/373 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S MI+   R  K+ LA +     +  GY      FS LI+     G   EA+ + + M  
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              KP+L+T N +++     G + + ++ + D M+  G QP+ +T+  +L V  + G   
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAML-LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L  +M  R I  D   Y+ ++D +CK   +D AF +  EM  K I+ N++TY+ +I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+  AGR DD   +  +M    I  + V+++ ++  + K G+  EA  + KEM   GI 
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +TY +L+ G+ K+   D+  +M + M +    PN+ T++ LI+ Y K     + +++
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           FR+    G+ AD V Y+ LI   C+ G +  A  L  EM    + PN+VTY  ++D    
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485

Query: 557 SATTECTVDDVER 569
           +  +E  ++  E+
Sbjct: 486 NGESEKALEIFEK 498



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 184/373 (49%), Gaps = 4/373 (1%)

Query: 184 KREER--KNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
           K EER  K D  K  S +I  L + G +D A N+F     +G    +  ++ LI  +  +
Sbjct: 253 KMEERNIKLDAVKY-SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
           G   +   +   M +  + PN+VT++ +ID+  K G   +   E+  +M+  G+ PD IT
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEG-KLREAEELHKEMIHRGIAPDTIT 370

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           + SL+    +    + A  + + MV +G D +I T+N L++  CK  ++D   E+  +M 
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            + +  + VTY+T+I G+ + G+L+ A  +F EM    +  + V+Y  +L      G  E
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           +AL + +++E S +  D   YN ++ G     K D+   +F  +    V P + TY+ +I
Sbjct: 491 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
               K G   EA  +FR+ ++ G   D   Y+ LI A   +G    +V L++E+ + G  
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 610

Query: 542 PNVVTYNSIIDAF 554
            +  T   +ID  
Sbjct: 611 VDASTIKMVIDML 623



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 227/521 (43%), Gaps = 79/521 (15%)

Query: 276 GGVDFK--HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G VD K    +++F DM+ +   P  I F+ L +  ++   ++    L  +M  +GI  +
Sbjct: 63  GLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHN 122

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++T + +++  C+  ++ LAF  M ++      PN +T+ST+I+G    GR+ +AL +  
Sbjct: 123 LYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVD 182

Query: 394 EMKFLGIGLDRVSYNT-----------------------------------VLSIYAKLG 418
            M  +G   D ++ NT                                   VL++  K G
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           +   A+ + ++ME   I+ DAV Y+ ++ G  K G  D    +F +M+   ++ N++TY+
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 302

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            LI  +   G + +  ++ R+  +  +  +VV +S LID+  K G +  A  L  EM   
Sbjct: 303 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 362

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD-DKDVQ----- 592
           GI P+ +TY S+ID F +           E  L K  +   +D M S+  D +++     
Sbjct: 363 GIAPDTITYTSLIDGFCK-----------ENHLDKANQM--VDLMVSKGCDPNIRTFNIL 409

Query: 593 -----EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLK 640
                +A R D+  +++F ++                +  C LG       +FQ+M   K
Sbjct: 410 INGYCKANRIDDG-LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRL----FDNQVYG-VAHGLLMGYR-DNIW 694
           + PN+VT+  +L+        E A  + E++       D  +Y  + HG+    + D+ W
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528

Query: 695 VQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLV 735
                LF  + L         YN +   L   G    A+L+
Sbjct: 529 ----DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 96/200 (48%), Gaps = 7/200 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I     LGK+++AK +F+  ++      +  +  L+     +G  ++A+ +F  +++
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGL 314
             ++ ++  YN +I   C    VD     ++F  +   GV+P   T+N ++  +C +G L
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVD--DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA   LF +M   G   D +TYN L+ A         + +++ E+     S +  T   
Sbjct: 560 SEAEL-LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 618

Query: 375 MIDGYAKAGRLDDA-LNMFS 393
           +ID  +  GRL  + L+M S
Sbjct: 619 VIDMLSD-GRLKKSFLDMLS 637


>gi|428186270|gb|EKX55120.1| hypothetical protein GUITHDRAFT_53115, partial [Guillardia theta
           CCMP2712]
          Length = 363

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 180/321 (56%), Gaps = 10/321 (3%)

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML----RNGV----- 295
           + A+ V  S+++  L P  V+YNA + A  + G  ++  + +FD +     RN V     
Sbjct: 1   EAALEVLKSIEKEGLTPTRVSYNAAMSALTRNG-RWREALSMFDSVFSQTERNKVAARSL 59

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +PD +TF++ ++ C++GG W+ A N+++EM  +GI+ + FT+  L+ A  KG Q+  AFE
Sbjct: 60  RPDTVTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFE 119

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           +   M A+ I  NV T++  I    K G    AL +  EM   GI  +  +Y+  +S   
Sbjct: 120 VFERMQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISACE 179

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K      AL + + M +  I+ D + Y+A++   GK G ++   R+F++MK + ++P+++
Sbjct: 180 KAAEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPDVV 239

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
            YSTLI  Y + G +  A+++F+  ++AG++ +V+ Y+  I A  K G    ++ LL+ M
Sbjct: 240 AYSTLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLERM 299

Query: 536 TKEGIRPNVVTYNSIIDAFGR 556
             + +RP+ V YN +I A  R
Sbjct: 300 KADKLRPDAVAYNFVISALSR 320



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 185/355 (52%), Gaps = 10/355 (2%)

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF---------NSMKRYNLK 260
           + A  + ++   EG   T  +++A +SA  R+G  +EA+S+F         N +   +L+
Sbjct: 1   EAALEVLKSIEKEGLTPTRVSYNAAMSALTRNGRWREALSMFDSVFSQTERNKVAARSLR 60

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           P+ VT++  I AC KGG +++  + ++ +M   G++P+  TF +L+  C +GG    A  
Sbjct: 61  PDTVTFSTAISACAKGG-EWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFE 119

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           +F  M  RGI  +++T+   + +  K      A +++ EM AK I PN+  YS  I    
Sbjct: 120 VFERMQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISACE 179

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           KA     AL +   M    I  D + Y+ V++   K G +E A  + ++M+  G+  D V
Sbjct: 180 KAAEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPDVV 239

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
            Y+ L+  Y + G++     +F+ M+   V PN++ Y+  I   +K G ++ ++ +    
Sbjct: 240 AYSTLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLERM 299

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           K   L+ D V Y+ +I AL + G  ++ ++LL  + ++  +PN+ TY ++I A G
Sbjct: 300 KADKLRPDAVAYNFVISALSRGGQWDAGLTLLQMLEEDEAQPNISTYCTVIKACG 354



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 177/342 (51%), Gaps = 10/342 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYA---------FSALISAYGRSGYCQEA 247
           +A +S L R G+   A ++F++  ++   N V A         FS  ISA  + G  Q A
Sbjct: 23  NAAMSALTRNGRWREALSMFDSVFSQTERNKVAARSLRPDTVTFSTAISACAKGGEWQRA 82

Query: 248 ISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA 307
           +++++ M+   ++PN  T+ A+I AC KGG       E+F+ M   G+  +  TF + ++
Sbjct: 83  MNMYHEMEAQGIEPNEFTFAALITACEKGG-QVSKAFEVFERMQARGIVGNVYTFTAAIS 141

Query: 308 VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
            C + G W+ A  L  EM+ +GI  ++  Y+  + A  K A+   A  ++  M  + I P
Sbjct: 142 SCEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISACEKAAEARPALGLLERMTNEKIKP 201

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           +++ YS ++    KAG  + A  +F +MK  G+  D V+Y+T++  Y + G +  AL V 
Sbjct: 202 DIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPDVVAYSTLIQAYQRAGEWSRALEVF 261

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           + ME +G+R + + Y   +    K G++     + E+MKAD + P+ + Y+ +I   S+G
Sbjct: 262 QLMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLERMKADKLRPDAVAYNFVISALSRG 321

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           G +   + + +  ++   + ++  Y  +I A   NG  E A+
Sbjct: 322 GQWDAGLTLLQMLEEDEAQPNISTYCTVIKACGDNGQWEKAL 363



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 137/293 (46%), Gaps = 42/293 (14%)

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE---------QMKADCVS 471
           E AL V K +E  G+    V+YNA +    + G++ E   MF+         ++ A  + 
Sbjct: 1   EAALEVLKSIEKEGLTPTRVSYNAAMSALTRNGRWREALSMFDSVFSQTERNKVAARSLR 60

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P+ +T+ST I   +KGG ++ AM ++ E +  G++ +   ++ALI A  K G V  A  +
Sbjct: 61  PDTVTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEV 120

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
            + M   GI  NV T+ + I +  +       + D +R L        L+ M +   K +
Sbjct: 121 FERMQARGIVGNVYTFTAAISSCEK-------LGDWQRALKL------LEEMIA---KGI 164

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
           Q   +  +  I        EKA + +            LG+ ++M   KIKP+++ +SA+
Sbjct: 165 QPNLQAYSAAISA-----CEKAAEARP----------ALGLLERMTNEKIKPDIIVYSAV 209

Query: 652 LNACSRCNSFEDASMLLEELRLFDNQVYGVAHG-LLMGY-RDNIWVQALSLFD 702
           + AC +   +E A+ + ++++        VA+  L+  Y R   W +AL +F 
Sbjct: 210 MAACGKAGLWEPAARIFQKMKREGLTPDVVAYSTLIQAYQRAGEWSRALEVFQ 262



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 82/182 (45%), Gaps = 26/182 (14%)

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMC 584
           E+A+ +L  + KEG+ P  V+YN+ + A  R+              G+ +E+ ++ D++ 
Sbjct: 1   EAALEVLKSIEKEGLTPTRVSYNAAMSALTRN--------------GRWREALSMFDSVF 46

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
           SQ +++ + A R+       F   ++  A  G+ +          + ++ +M    I+PN
Sbjct: 47  SQTERN-KVAARSLRPDTVTFSTAISACAKGGEWQR--------AMNMYHEMEAQGIEPN 97

Query: 645 VVTFSAILNACSRCNSFEDASMLLEEL--RLFDNQVYGVAHGLLMGYRDNIWVQALSLFD 702
             TF+A++ AC +      A  + E +  R     VY     +    +   W +AL L +
Sbjct: 98  EFTFAALITACEKGGQVSKAFEVFERMQARGIVGNVYTFTAAISSCEKLGDWQRALKLLE 157

Query: 703 EV 704
           E+
Sbjct: 158 EM 159


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 212/433 (48%), Gaps = 42/433 (9%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +  LL  L + G    A++  A A  R+ R     +  + ++  L R  +  L + +FE 
Sbjct: 136 FDTLLSLLADHGLLDDAVR--ALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEH 193

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                    V+ F+ +I    + G   EA ++F  MK     P++VTYN++ID  GK G 
Sbjct: 194 L----PAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCG- 248

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           + + V  +  +M ++G   D +T+N+L+   S+ G  E A + F EM   G+  ++ T +
Sbjct: 249 ELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLS 308

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           T +DA CK   +  A ++ A+M  + + PN  TY++++DG  KAGRLDDA+ +  EM   
Sbjct: 309 TFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ 368

Query: 399 GIGLDRVSYNTVLSIYAKLGRF-----------------------------------EEA 423
           G+  + V+Y  ++    K G+                                    E A
Sbjct: 369 GLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERA 428

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
           L +  EM++ G+  D   Y  L+ G  K  K DE + +  +M    + PN + Y+T++D 
Sbjct: 429 LDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDA 488

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           + K G   EA+ +  +   +GL+ +VV Y ALID LCK G +  A+S  D+M + G+ PN
Sbjct: 489 FFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPN 548

Query: 544 VVTYNSIIDAFGR 556
           V  Y ++ID F +
Sbjct: 549 VQVYTTLIDGFCK 561



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 194/357 (54%), Gaps = 1/357 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I   G+ G+++  + +       G    V  ++ALI+ + + G+ ++A S F  MKR
Sbjct: 238 NSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKR 297

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +  N+VT +  +DA  K G+  +  +++F  M   G+ P+  T+ SL+    + G  +
Sbjct: 298 LGVMANVVTLSTFVDAFCKEGL-VREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLD 356

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L +EMVH+G+  ++ TY  ++D +CK  ++ +A ++++ M    +  N + Y+T+I
Sbjct: 357 DAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLI 416

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+      + AL++ +EMK  G+ LD   Y T++    K+ + +EA  +  +M+  G+R
Sbjct: 417 HGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLR 476

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + V Y  ++  + K GK  E   +  ++    + PN++TY  LID   K G   EA+  
Sbjct: 477 PNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISH 536

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           F + ++ GL  +V +Y+ LID  CK G +  AV L++EM  +G+  + V Y S+ID 
Sbjct: 537 FDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDG 593



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 211/460 (45%), Gaps = 42/460 (9%)

Query: 295 VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAF 354
           V P+  T N +L   +R       R LF  +       ++FT+N ++D +CK  ++  A 
Sbjct: 164 VPPNTRTCNHILLRLARNRQGGLVRRLFEHLPA----PNVFTFNIVIDFLCKQGELVEAR 219

Query: 355 EIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY 414
            +   M A   SP+VVTY+++IDGY K G L++   + SEM+  G   D V+YN +++ +
Sbjct: 220 ALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCF 279

Query: 415 AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
           +K G  E+A     EM+  G+  + VT +  +  + K+G   E  ++F QM+   + PN 
Sbjct: 280 SKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNE 339

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
            TY++L+D   K G   +A+ +  E    GL  +VV Y+ ++D LCK G V  A  +L  
Sbjct: 340 FTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSL 399

Query: 535 MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD---------AMCS 585
           M + G++ N + Y ++I     +  +E  +D +     K  E   LD          +C 
Sbjct: 400 MERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGME---LDVSLYGTLIWGLCK 456

Query: 586 QDDKD--------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
               D        + + G   N +I         KAG+  +           + +  K+ 
Sbjct: 457 VQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEA----------VALLHKIP 506

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYGVAHGLLMGY-RDN 692
              ++PNVVT+ A+++   +  S  +A    +++R      + QVY     L+ G+ +  
Sbjct: 507 DSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTT---LIDGFCKIG 563

Query: 693 IWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
              +A+ L +E+     S     Y +L D     G  +GA
Sbjct: 564 SLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGA 603



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/427 (23%), Positives = 198/427 (46%), Gaps = 43/427 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+   + G ++ A + F      G    V   S  + A+ + G  +EA+ +F  M+ 
Sbjct: 273 NALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRV 332

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF-------------- 302
             + PN  TY +++D   K G      + + D+M+  G+ P+ +T+              
Sbjct: 333 RGMMPNEFTYTSLVDGTCKAG-RLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVA 391

Query: 303 --NSLLAVCSRGGL-------------------WEAARNLFNEMVHRGIDQDIFTYNTLL 341
             + +L++  R G+                    E A +L NEM ++G++ D+  Y TL+
Sbjct: 392 VADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLI 451

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             +CK  ++D A  ++ +M    + PN V Y+T++D + KAG+  +A+ +  ++   G+ 
Sbjct: 452 WGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQ 511

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + V+Y  ++    K G   EA+    +M   G+  +   Y  L+ G+ K G   +   +
Sbjct: 512 PNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHL 571

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
             +M    +S + + Y++LID + K G  + A  +  +  + GL+ D+  Y+  I   C 
Sbjct: 572 MNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCN 631

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
             +++ A  +L EM   GI P+   YN +I  + +       + ++E     Q E  ++ 
Sbjct: 632 MNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQK-------LGNMEEASSLQNEMESVL 684

Query: 582 AMCSQDD 588
           + C+++D
Sbjct: 685 SSCTEED 691



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 146/313 (46%), Gaps = 26/313 (8%)

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           ++T+LS+ A  G  ++A+     +    +  +  T N +L    +  +   VRR+FE + 
Sbjct: 136 FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLP 195

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           A    PN+ T++ +ID   K G   EA  +F   K  G   DVV Y++LID   K G +E
Sbjct: 196 A----PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELE 251

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE---CTVDDVERDLGKQKESANL--- 580
               L+ EM K G   +VVTYN++I+ F +    E       +++R LG       L   
Sbjct: 252 EVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKR-LGVMANVVTLSTF 310

Query: 581 -DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL--CILGVFQKMH 637
            DA C +    V+EA +   Q ++V G +  E       +  C+   L   I+ + + +H
Sbjct: 311 VDAFCKEG--LVREAMKLFAQ-MRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH 367

Query: 638 KLKIKPNVVTFSAILNACSRCNSF---EDASMLLEELRLFDNQVY--GVAHGLLMGYRDN 692
           +  + PNVVT++ +++   +       +D   L+E   +  N++    + HG  M     
Sbjct: 368 Q-GLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSE 426

Query: 693 IWVQALSLFDEVK 705
              +AL L +E+K
Sbjct: 427 ---RALDLLNEMK 436


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 230/469 (49%), Gaps = 21/469 (4%)

Query: 101 STRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYT 160
           S R  S+M      I+ ++ H +++  AL    AFA       D+ +     LC    + 
Sbjct: 67  SLRLYSRMKSLSLPISTASLHPLLS--ALPSAPAFAL----FADMFR-LRLPLC-TTTFN 118

Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF-ETA 219
            +LR L + G+ ++A++      ++  R N      + +I+     G+V  A +I  E  
Sbjct: 119 IMLRHLCSAGKPARALELL----RQMPRPN--AVTYNTVIAGFCSRGRVQAALDIMREMR 172

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVTYNAVIDA-CGKGG 277
              G     Y +  +IS + + G   EA+ VF+ M  +  +KP  V YNA+I   C +G 
Sbjct: 173 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 232

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D   +    D M+  GV     T+N L+      G    A  L  EM  +G+  D+FTY
Sbjct: 233 LDTALLYR--DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 290

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L++  CK   +  A EI   M  + +   VVTY+ +I   +K G++ +   +F E   
Sbjct: 291 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 350

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI  D V YN +++ ++  G  + A  +  EME   I  D VTYN L+ G    G+ DE
Sbjct: 351 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 410

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            R++ ++M    + P+L+TY+TLI  YS  G  K+A++I  E    G    ++ Y+ALI 
Sbjct: 411 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 470

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            LCKNG  + A +++ EM + GI P+  TY S+I+  G +   E  +DD
Sbjct: 471 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE--GLTTEDERAIDD 517



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 189/396 (47%), Gaps = 53/396 (13%)

Query: 286 IFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +F DM R  +     TFN +L  +CS G   + AR L  E++ +    +  TYNT++   
Sbjct: 101 LFADMFRLRLPLCTTTFNIMLRHLCSAG---KPARAL--ELLRQMPRPNAVTYNTVIAGF 155

Query: 345 CKGAQMDLAFEIMAEMPAKN-ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG-IGL 402
           C   ++  A +IM EM  +  I+PN  TY T+I G+ K GR+D+A+ +F EM   G +  
Sbjct: 156 CSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 215

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           + V YN ++  Y   G+ + ALL    M   G+     TYN L+      G+  E   + 
Sbjct: 216 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 275

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           E+M    ++P++ TY+ LI+ + K G  K+A++IF    + G++A VV Y+ALI AL K 
Sbjct: 276 EEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKK 335

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           G V+    L DE  + GIRP++V YN++I++                       S N+D 
Sbjct: 336 GQVQETDKLFDEAVRRGIRPDLVLYNALINS--------------------HSTSGNID- 374

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL--- 639
                            +  ++ G++  ++              LC+LG   +  KL   
Sbjct: 375 -----------------RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 417

Query: 640 ----KIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                I+P++VT++ +++  S     +DA  +  E+
Sbjct: 418 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 453



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 130/286 (45%), Gaps = 39/286 (13%)

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +F++M  L + L   ++N +L      G+   AL + ++M     R +AVTYN ++ 
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 153

Query: 448 GYGKQGKYDEVRRMFEQMKA-DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG-L 505
           G+  +G+      +  +M+    ++PN  TY T+I  + K G   EA+++F E    G +
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           K + V+Y+ALI   C  G +++A+   D M + G+   V TYN ++ A            
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD-------- 265

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQE-AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                 G+  E+  L          V+E  G+     +  +  L+     +G  +     
Sbjct: 266 ------GRGTEAYEL----------VEEMGGKGLAPDVFTYNILINGHCKEGNVKK---- 305

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                L +F+ M +  ++  VVT++A++ A S+    ++   L +E
Sbjct: 306 ----ALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 347


>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
 gi|224029903|gb|ACN34027.1| unknown [Zea mays]
 gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
          Length = 819

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 203/399 (50%), Gaps = 4/399 (1%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           ++  L+RE+   G    A+  F + +K +E    +  +   MI +  R  KVD A+ +F 
Sbjct: 119 NFPLLIREIAISGSLKHAVHVFRW-MKNQENYCARNDIYGMMIRLHARHNKVDQARGLFF 177

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                        +++LI A+ R+G    AI++ + M+R  + P+  TYN VI+ACG  G
Sbjct: 178 EMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAG 237

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            ++K  +E+   M  NGV PD IT N +L+    G  +  A   F  M    +  D  T 
Sbjct: 238 -NWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTM 296

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNIS--PNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           N ++  + K      A E+   M  +  +  P+VVTY++++  Y+  G+ ++   +F  M
Sbjct: 297 NIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIM 356

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G+  + VSYN +L  YA  G   EAL   K ++ +G+R D V+Y +LL  YG+  + 
Sbjct: 357 VAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQP 416

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           ++ R +F +M+ +   PN ++Y+ LID Y   G+ KEA+ +  E +Q G++ DV+  S L
Sbjct: 417 EKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTL 476

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + A  +   +     +L      GI+ N V YNS I ++
Sbjct: 477 LTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSY 515



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/516 (25%), Positives = 255/516 (49%), Gaps = 11/516 (2%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
           G + +AI+ F    +R    +      ++++      G+ +  K +F+  + EG    + 
Sbjct: 307 GLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIV 366

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           +++AL+ AY   G   EA+  F  +K+  L+P++V+Y ++++A G+     K   E+F++
Sbjct: 367 SYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEK-AREVFNE 425

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M +N  +P+++++N+L+      G+ + A +L +EM   GI  D+ + +TLL A  +  Q
Sbjct: 426 MRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCKQ 485

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +     I+A   ++ I  N V Y++ I  Y   G    AL +++ M+   +  D V+YN 
Sbjct: 486 LTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNI 545

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++S   KLGR+ E+L   ++M    I      Y++++  Y KQGK  E    F  MK   
Sbjct: 546 LISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETG 605

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P++LTY+TLI  YS  G ++ A  +F+E +  G + D ++ S+L++AL K G  E  +
Sbjct: 606 CFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPERVL 665

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            L++ M ++ I+ N   Y  II +       + T   +   L     S +   + +    
Sbjct: 666 QLIEFMKQKKIQLNQKAYFEIISSCTMLRDWK-TASQIIEHLDSSLSSISFGTL-NHILN 723

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIK 642
            + + GRT++ ++K+F ++V   +  G          L I+G       V Q M    + 
Sbjct: 724 FLGKCGRTES-MMKLFYKMVTSCSTVGLSTYTILLRNLLIVGKWRKYVEVLQWMEDAGVC 782

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
           P +  + ++L    R NS +  +++ E++     +V
Sbjct: 783 PTLYMYQSVLPYIWRDNSMDYVTLMQEKINALREKV 818



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 208/455 (45%), Gaps = 76/455 (16%)

Query: 280 FKHVVEIFDDM-------LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
            KH V +F  M        RN +      +  ++ + +R    + AR LF EM       
Sbjct: 133 LKHAVHVFRWMKNQENYCARNDI------YGMMIRLHARHNKVDQARGLFFEMQEWRCKP 186

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           +  TYN+L+ A  +  Q   A  IM +M    I P+  TY+ +I+    AG    AL + 
Sbjct: 187 NTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELC 246

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI----------------- 435
            +M   G+G D +++N VLS +    ++ +A+   + M+SS +                 
Sbjct: 247 KKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKI 306

Query: 436 --------------------RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
                                 D VTY +++  Y   G+ +  + +F+ M A+ V PN++
Sbjct: 307 GLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIV 366

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           +Y+ L+  Y+  G++ EA++ F+  KQ GL+ D+V Y++L++A  ++   E A  + +EM
Sbjct: 367 SYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEM 426

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVD---DVERDLGKQKESANLDAM------CSQ 586
            K   +PN V+YN++IDA+G +   +  +    ++E+D G Q +  ++  +      C Q
Sbjct: 427 RKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQD-GIQPDVISISTLLTACGRCKQ 485

Query: 587 DDK-DVQEAGRTDNQIIKVFGQL--VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
             K D+  A      I     QL  VA  +G G   +    +   +L  +  M    +KP
Sbjct: 486 LTKIDIILAAAKSRGI-----QLNTVAYNSGIGSYLSLGDYKKALVL--YTSMRAGNVKP 538

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
           + VT++ +++   +   +      +E L+ F++ +
Sbjct: 539 DAVTYNILISGSCKLGRY------VESLKFFEDML 567


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 229/462 (49%), Gaps = 39/462 (8%)

Query: 201 SILGRLGKVDL---AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++L +LGK D+   A+N++    + G   ++  F+ +I+   + G  QEA+ VFN + ++
Sbjct: 167 TLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQF 226

Query: 258 NLKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
           +L P+  TY ++I   C    +D     E+FD M+++G  P+ +T+++L+  +C+ G + 
Sbjct: 227 DLCPDAFTYTSLILGHCRNRKLD--KAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIG 284

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA  ++  EM  +GI+  ++TY   + ++C   ++D A  ++  M  K  SP+V TY+ +
Sbjct: 285 EAM-DMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G  +AG+++ A+ M+ +M   G+  + V+YN +++     GRF  AL +   ME  G 
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGT 403

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +A TYN ++ G       ++   +F +M  D  SP ++TY+TLI    K G    A +
Sbjct: 404 LANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATR 463

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
                K++  + D   Y  LI   CK G ++SA S   EM K GI PN  TY ++ID + 
Sbjct: 464 FLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYC 523

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
           +    +  +   ER                 ++     +  T N II          +G 
Sbjct: 524 KEGKIDVALSLFER----------------MEENGCSASIETYNAII----------SGL 557

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
            K       E  C      KM +  ++PN +T+++++N   +
Sbjct: 558 SKGNRFSEAEKFC-----AKMTEQGLQPNTITYTSLINGLCK 594



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 219/474 (46%), Gaps = 58/474 (12%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
            DD   L+R +G +G  S ++Q +                 +A+IS L R GK++LA  +
Sbjct: 318 VDDAINLVRSMGKKG-CSPSVQTY-----------------TAIISGLFRAGKMELAIGM 359

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
           +   L EG       ++ALI+     G    A+ +F+ M+ +    N  TYN +I     
Sbjct: 360 YHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLF- 418

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV-CSRGGLWEAARNLFNEMVHRGIDQDI 334
           G  D +  + +F+ ML++G  P  +T+N+L+     RG L  A R L+  M     + D 
Sbjct: 419 GMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLY-MMKESNCEPDE 477

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TY  L+   CKG ++D A     EM    ISPN  TY+ MIDGY K G++D AL++F  
Sbjct: 478 RTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFER 537

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M+  G      +YN ++S  +K  RF EA   C +M   G++ + +TY +L+ G  K   
Sbjct: 538 MEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTA 597

Query: 455 YDEVRRMFEQM-KADCV------------------------------SPNLLTYSTLIDV 483
            +   ++F +M K +C+                               P + TYSTL+  
Sbjct: 598 TNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSG 657

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             + G   EA Q+    K+ GL   + +Y +L+ A CK+  V+ A+ + + M  +G +P+
Sbjct: 658 LCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPH 717

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKES------ANLDAMCSQDDKDV 591
           +  Y  +I A    +  E  ++  +  L KQ  S        +D +  + D D+
Sbjct: 718 LFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDL 771



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 208/426 (48%), Gaps = 12/426 (2%)

Query: 147 KKFEFKLCGADDYTFLLRELG---NRGEWSKAIQCFAFAVKREERKNDQGKLASAMISIL 203
           K F+F LC  D +T+    LG   NR +  KA + F   VK  +  N      S +I+ L
Sbjct: 222 KIFQFDLC-PDAFTYTSLILGHCRNR-KLDKAFEVFDRMVK--DGCNPNSVTYSTLINGL 277

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
              G++  A ++ E    +G   TVY ++  IS+    G   +AI++  SM +    P++
Sbjct: 278 CNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSV 337

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            TY A+I    + G   +  + ++  ML+ G+ P+ +T+N+L+      G +  A  +F+
Sbjct: 338 QTYTAIISGLFRAG-KMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFD 396

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
            M   G   +  TYN ++  +     ++ A  +  +M     SP VVTY+T+I    K G
Sbjct: 397 WMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRG 456

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            L++A      MK      D  +Y  ++S + K G+ + A     EM   GI  +  TY 
Sbjct: 457 YLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYT 516

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           A++ GY K+GK D    +FE+M+ +  S ++ TY+ +I   SKG  + EA +   +  + 
Sbjct: 517 AMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQ 576

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           GL+ + + Y++LI+ LCKN     A  +  EM K+   PN  TY S+I    +    E  
Sbjct: 577 GLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQ----EGK 632

Query: 564 VDDVER 569
           VD  ER
Sbjct: 633 VDAAER 638



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 173/361 (47%), Gaps = 3/361 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI+IL + GKV  A  +F            + +++LI  + R+    +A  VF+ M +
Sbjct: 201 NTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVK 260

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               PN VTY+ +I+  C +G +     +++ ++M   G++P   T+   ++     G  
Sbjct: 261 DGCNPNSVTYSTLINGLCNEGRIG--EAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRV 318

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A NL   M  +G    + TY  ++  + +  +M+LA  +  +M  + + PN VTY+ +
Sbjct: 319 DDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNAL 378

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+     GR   AL +F  M+  G   +  +YN ++     +   E+A++V  +M   G 
Sbjct: 379 INELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGP 438

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
               VTYN L+    K+G  +   R    MK     P+  TY  LI  + KGG    A  
Sbjct: 439 SPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATS 498

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            F E  + G+  +   Y+A+ID  CK G ++ A+SL + M + G   ++ TYN+II    
Sbjct: 499 FFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLS 558

Query: 556 R 556
           +
Sbjct: 559 K 559



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 152/319 (47%), Gaps = 7/319 (2%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
            +  LIS + + G    A S F  M +  + PN  TY A+ID  C +G +D    + +F+
Sbjct: 479 TYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDV--ALSLFE 536

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M  NG      T+N++++  S+G  +  A     +M  +G+  +  TY +L++ +CK  
Sbjct: 537 RMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNT 596

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
             +LAF+I  EM  KN  PN  TY+++I G  + G++D A  +       G      +Y+
Sbjct: 597 ATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTEN----GCEPTIDTYS 652

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T++S   + GR  EA  + + M+  G+      Y +LL  + K  K D    +F  M   
Sbjct: 653 TLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVK 712

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
              P+L  Y  LI         +EA+ IF+   +    +D+++++ L+D L + G  +  
Sbjct: 713 GFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLC 772

Query: 529 VSLLDEMTKEGIRPNVVTY 547
           +  L  M      P++ TY
Sbjct: 773 MKFLYLMESRNCTPSLHTY 791



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 188/416 (45%), Gaps = 65/416 (15%)

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA------------ 348
           +FN+LL    +  +  +A+N++ ++   G+   + T+NT+++ +CK              
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223

Query: 349 -----------------------QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
                                  ++D AFE+   M     +PN VTYST+I+G    GR+
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            +A++M  EM   GI     +Y   +S    +GR ++A+ + + M   G      TY A+
Sbjct: 284 GEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  + GK +    M+ +M  + + PN +TY+ LI+     G +  A++IF   +  G 
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGT 403

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS-IIDAFGRSATTECTV 564
            A+   Y+ +I  L     +E A+ + ++M K+G  P VVTYN+ I++   R       +
Sbjct: 404 LANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGY-----L 458

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQE-------AGRTDNQIIKVFGQLVAEKAGQGK 617
           ++  R L   KES      C  D++   E        G+ D+     +  L   K G   
Sbjct: 459 NNATRFLYMMKESN-----CEPDERTYCELISGFCKGGKLDSATSFFYEML---KCGISP 510

Query: 618 KE--------NRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
            +          C++ +I   L +F++M +     ++ T++AI++  S+ N F +A
Sbjct: 511 NQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEA 566



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 152/320 (47%), Gaps = 33/320 (10%)

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++++NTLL  + K   +  A  + A++ +  + P+++T++TMI+   K G++ +A+ +F+
Sbjct: 162 LYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFN 221

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           ++    +  D  +Y +++  + +  + ++A  V   M   G   ++VTY+ L+ G   +G
Sbjct: 222 KIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEG 281

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           +  E   M E+M    + P + TY+  I      G   +A+ + R   + G    V  Y+
Sbjct: 282 RIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYT 341

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           A+I  L + G +E A+ +  +M KEG+ PN VTYN++I+         CT         +
Sbjct: 342 AIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINEL-------CT---------E 385

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIK-VFGQLVAEKAGQGKKENRCRQEILCILGV 632
            +    L      +        +T NQIIK +FG    EKA                + V
Sbjct: 386 GRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKA----------------MVV 429

Query: 633 FQKMHKLKIKPNVVTFSAIL 652
           F KM K    P VVT++ ++
Sbjct: 430 FNKMLKDGPSPTVVTYNTLI 449



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 161/380 (42%), Gaps = 34/380 (8%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+ E   RG  + A + F + +K    + D+ +    +IS   + GK+D A + F  
Sbjct: 445 YNTLIVENLKRGYLNNATR-FLYMMKESNCEPDE-RTYCELISGFCKGGKLDSATSFFYE 502

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L  G     + ++A+I  Y + G    A+S+F  M+      ++ TYNA+I    KG  
Sbjct: 503 MLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGN- 561

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM------------- 325
            F    +    M   G+QP+ IT+ SL+    +      A  +F+EM             
Sbjct: 562 RFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYT 621

Query: 326 ------------------VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
                                G +  I TY+TL+  +C+  + + A +++  M  K +SP
Sbjct: 622 SLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSP 681

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           ++  Y +++  + K+ ++D AL +F+ M   G       Y  ++     + R EEAL + 
Sbjct: 682 SMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIF 741

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           + +       D + +  L+ G  ++G  D   +    M++   +P+L TY  L    SK 
Sbjct: 742 QSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKV 801

Query: 488 GLYKEAMQIFREFKQAGLKA 507
           G      QI    ++  L +
Sbjct: 802 GKSIGTDQIGNRLREVSLPS 821



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 125/271 (46%), Gaps = 33/271 (12%)

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           R+ D L+  S       G    S+NT+L    K      A  V  ++ SSG++   +T+N
Sbjct: 142 RVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFN 201

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            ++    K+GK  E   +F ++    + P+  TY++LI  + +     +A ++F    + 
Sbjct: 202 TMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKD 261

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           G   + V YS LI+ LC  G +  A+ +L+EMT++GI P V TY   I +          
Sbjct: 262 GCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLC-------- 313

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD-NQIIKVFGQLVAEKAGQGKKENRC 622
                 D+G+  ++ NL          V+  G+   +  ++ +  +++     GK E   
Sbjct: 314 ------DIGRVDDAINL----------VRSMGKKGCSPSVQTYTAIISGLFRAGKME--- 354

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
                  +G++ KM K  + PN VT++A++N
Sbjct: 355 -----LAIGMYHKMLKEGLVPNTVTYNALIN 380


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 256/529 (48%), Gaps = 70/529 (13%)

Query: 188 RKNDQGKLASAMIS---ILGR---LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
           R+ND  + A +++S   I+ R   LG  D+AK+ F   L  G     Y+++ LI     +
Sbjct: 174 RQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVA 233

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN-GVQPDRI 300
           G  +EA+ + N M++  L+P++VTY  V       G+      EI   ML + G++PD +
Sbjct: 234 GSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGL-MSGAREIIQKMLTDEGLKPDLV 292

Query: 301 TFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           T+  L+   C  G + EA R L  +++  G   ++  Y+ LL ++CK  Q+D A +++ E
Sbjct: 293 TYTVLICGHCQMGNIEEALR-LRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYE 351

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI------------GL----- 402
           M A N+ P++VTYS +I G  K G++  A+ ++ EM F  I            GL     
Sbjct: 352 MEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGM 411

Query: 403 ------------------DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
                             D   YN ++  Y KLG  EEA+ + K +    I    VT+N+
Sbjct: 412 LSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNS 471

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G+ K  K  E RR+ E +K   + P+ +TY+TL++ Y + G   +  ++  E     
Sbjct: 472 LIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD 531

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT---- 560
           ++  VV Y+ +I  LCK   +E +V LL++M  +G+ P+ +TYN+II  F ++       
Sbjct: 532 IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAF 591

Query: 561 ECTVDDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRT-------DNQIIKV-FGQLVA 610
           E   D +  +L     + N  +D +C     DV++A R        +  + KV +  ++ 
Sbjct: 592 ELLDDMLIHNLEPTPATYNVLIDGLCRYG--DVEDADRVLVSLQDRNINLTKVAYTTMIK 649

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN-ACSRC 658
               +G  +   +        VF +M +   + ++  +SA++N  C RC
Sbjct: 650 AHCVKGDAQRAVK--------VFHQMVEKGFEVSIKDYSAVINRLCKRC 690



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 204/404 (50%), Gaps = 11/404 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILG--RLGKVDLAKNIF 216
           Y+ LL  L  RG+  +A+Q     +   E  N Q  L +  I I G  + GKV  A  ++
Sbjct: 329 YSVLLSSLCKRGQVDEALQ----LLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLY 384

Query: 217 -ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
            E   N  + N+ +A S ++      G   +A   F+S+   NL+P++  YN +ID   K
Sbjct: 385 KEMCFNRIFPNS-FAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVK 443

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDI 334
            G D +  V ++  +    + P  +TFNSL+   C    + EA R L +  +H G++   
Sbjct: 444 LG-DVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLH-GLEPSA 501

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TY TL++A C+   ++   E++ EM  K+I P VVTY+ +I G  K  +L++++ +  +
Sbjct: 502 VTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLED 561

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M+  G+  D+++YNT++  + K     +A  +  +M    +     TYN L+ G  + G 
Sbjct: 562 MRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGD 621

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            ++  R+   ++   ++   + Y+T+I  +   G  + A+++F +  + G +  +  YSA
Sbjct: 622 VEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSA 681

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +I+ LCK  L+  A      M  +G+ P+   +  +++AF R+ 
Sbjct: 682 VINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAG 725



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 144/595 (24%), Positives = 266/595 (44%), Gaps = 66/595 (11%)

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVI--------------DACGKGGVDFKHVVEI 286
           S    +A+ V   MK  NL+P++ TYN+++              D    G         I
Sbjct: 96  SRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSI 155

Query: 287 FDDML------RNGV-----------QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
             D L      R+ V            P  ++FN++++   + GL + A++ F  M+  G
Sbjct: 156 IVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           I  D ++YN L+  +     M+ A E+  +M  + + P++VTY  +  G+   G +  A 
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275

Query: 390 NMFSEM-KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            +  +M    G+  D V+Y  ++  + ++G  EEAL + +++ SSG + + + Y+ LL  
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             K+G+ DE  ++  +M+A+ + P+L+TYS LI    K G  ++A+Q+++E     +  +
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPN 395

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
              +S ++  LC+ G++  A    D +    +RP+V  YN +ID + +    E  V   +
Sbjct: 396 SFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYK 455

Query: 569 --RDLGKQKESANLDAM----CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
             RD          +++    C   ++ V EA R     IK+ G   +           C
Sbjct: 456 RLRDKAITPSIVTFNSLIYGFCK--NRKVVEARRLLES-IKLHGLEPSAVTYTTLMNAYC 512

Query: 623 RQEILCILGVFQKMHKL-------KIKPNVVTFSAILNACSRCNSFEDASMLLEELR--- 672
            +      G   K+H+L        I+P VVT++ ++    +    E++  LLE++R   
Sbjct: 513 EE------GNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKG 566

Query: 673 LFDNQV-YGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRG 731
           L  +Q+ Y          +D    +A  L D++ + +     A YN L D L  +G    
Sbjct: 567 LAPDQITYNTIIQCFCKAKD--MRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVED 624

Query: 732 AQLVVLEGKRRQV-WENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHEL 785
           A  V++  + R +    V   + +  H +   A RA V  +    H +V +G E+
Sbjct: 625 ADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRA-VKVF----HQMVEKGFEV 674



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 171/349 (48%), Gaps = 7/349 (2%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           +L+ L  +G  S A   F   +    R +    L + MI    +LG V+ A  +++   +
Sbjct: 402 ILKGLCEKGMLSDARMYFDSLIMSNLRPD--VTLYNIMIDGYVKLGDVEEAVRLYKRLRD 459

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDF 280
           +    ++  F++LI  + ++    EA  +  S+K + L+P+ VTY  +++A C +G ++ 
Sbjct: 460 KAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINK 519

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
            H  E+  +M    ++P  +T+  ++  +C +  L E+ + L  +M  +G+  D  TYNT
Sbjct: 520 LH--ELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQ-LLEDMRAKGLAPDQITYNT 576

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++   CK   M  AFE++ +M   N+ P   TY+ +IDG  + G ++DA  +   ++   
Sbjct: 577 IIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRN 636

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I L +V+Y T++  +   G  + A+ V  +M   G       Y+A++    K+   +E +
Sbjct: 637 INLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAK 696

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             F  M +D VSP+   +  +++ + + G      ++     + GL  D
Sbjct: 697 YYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 225/465 (48%), Gaps = 45/465 (9%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA-VIDACGKGGVDFKHVVEI 286
           V  +SA+I +  + G   +A ++F  M+   + P+L TYN+ ++  C  G   +    ++
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG--RWSDAEQL 312

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             +ML   + PD +T+N+L+    + G +  A  L++EM+ RGI  +  TY++++D  CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++D A  +   M  K  SPN++T++T+IDGY  A R+DD + +  EM   G+  D  +
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNT++  +  +G    AL + +EM SSG+  D VT + LL G    GK  +   MF+ M+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 467 A-----------DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
                       + V P++ TY+ LI      G + EA +++ E    G+  D + YS++
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           ID LCK   ++ A  + D M  +   PNVVT+ ++I+ + ++      VDD         
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR----VDD--------- 599

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
               L+  C    + +     T   +I  F      K G           I   L +FQ+
Sbjct: 600 ---GLELFCEMGRRGIVANAITYITLICGF-----RKVGN----------INGALDIFQE 641

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG 680
           M    + P+ +T   +L         + A  +LE+L++  +  +G
Sbjct: 642 MISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMDLSFG 686



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 195/371 (52%), Gaps = 12/371 (3%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + SA+I  L + G+   A+N+F     +G    ++ ++++I  +  SG   +A  +   M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               + P++VTYNA+I+A  K G  F    E++D+ML  G+ P+ IT++S++    +   
Sbjct: 317 LERKISPDVVTYNALINAFVKEG-KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +AA ++F  M  +G   ++ T+NTL+D  C   ++D   E++ EM    +  +  TY+T
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS- 433
           +I G+   G L+ AL++  EM   G+  D V+ +T+L      G+ ++AL + K M+ S 
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 434 ----------GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
                     G+  D  TYN L+ G   +GK+ E   ++E+M    + P+ +TYS++ID 
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K     EA Q+F          +VV ++ LI+  CK G V+  + L  EM + GI  N
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 544 VVTYNSIIDAF 554
            +TY ++I  F
Sbjct: 616 AITYITLICGF 626



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 243/500 (48%), Gaps = 39/500 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++ ++ R+ + DL  ++++    +     +Y+F+ LI  +        A+S F  + +  
Sbjct: 85  LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLG 144

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
           L P++VT+N ++   C +  V     + +F  M     +P+ +TF +L+  +C  G + E
Sbjct: 145 LHPDVVTFNTLLHGLCVEDRV--SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-PAKNISPNVVTYSTM 375
           A   L + M+  G+     TY T++D +CK      A  ++ +M    +I PNVV YS +
Sbjct: 203 AVA-LLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID   K GR  DA N+F+EM+  GI  D  +YN+++  +   GR+ +A  + +EM    I
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VTYNAL+  + K+GK+ E   ++++M    + PN +TYS++ID + K      A  
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F      G   +++ ++ LID  C    ++  + LL EMT+ G+  +  TYN++I  F 
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 556 RSATTECTVDDVER---------------------DLGKQKESANLDAMCSQDDKDVQEA 594
                   +D ++                      D GK K++  +  +  +  KD+ +A
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL-DA 500

Query: 595 GRTDNQI---IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
               N +   ++ +  L++    +GK         L    ++++M    I P+ +T+S++
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGK--------FLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 652 LNACSRCNSFEDASMLLEEL 671
           ++   + +  ++A+ + + +
Sbjct: 553 IDGLCKQSRLDEATQMFDSM 572



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 183/389 (47%), Gaps = 16/389 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  ++    + G WS A Q     ++R  + +      +A+I+   + GK   A+ +++ 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLER--KISPDVVTYNALINAFVKEGKFFEAEELYDE 350

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            L  G       +S++I  + +      A  +F  M      PNL+T+N +ID  CG   
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D    +E+  +M   G+  D  T+N+L+      G   AA +L  EM+  G+  DI T 
Sbjct: 411 ID--DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 338 NTLLDAICKGAQMDLAFEIMAEM-----------PAKNISPNVVTYSTMIDGYAKAGRLD 386
           +TLLD +C   ++  A E+   M           P   + P+V TY+ +I G    G+  
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A  ++ EM   GI  D ++Y++++    K  R +EA  +   M S     + VT+  L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GY K G+ D+   +F +M    +  N +TY TLI  + K G    A+ IF+E   +G+ 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEM 535
            D +    ++  L     ++ AV++L+++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 140/270 (51%), Gaps = 12/270 (4%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           ++D    +       G       ++ LI  +   G    A+ +   M    L P++VT +
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLR-----------NGVQPDRITFNSLLAVCSRGGLWE 316
            ++D     G   K  +E+F  M +           NGV+PD  T+N L++     G + 
Sbjct: 470 TLLDGLCDNG-KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L+ EM HRGI  D  TY++++D +CK +++D A ++   M +K+ SPNVVT++T+I
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY KAGR+DD L +F EM   GI  + ++Y T++  + K+G    AL + +EM SSG+ 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
            D +T   +L G   + +      M E+++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 145/276 (52%), Gaps = 1/276 (0%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
            +  +++F DMLR+   P  + F  L+ V  R    +   +L+ +M  + I  DI+++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+   C  +++  A     ++    + P+VVT++T++ G     R+ +ALN+F +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
              + V++ T+++   + GR  EA+ +   M   G++   +TY  ++ G  K+G      
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 460 RMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            +  +M +   + PN++ YS +ID   K G + +A  +F E ++ G+  D+  Y+++I  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            C +G    A  LL EM +  I P+VVTYN++I+AF
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 153/320 (47%), Gaps = 32/320 (10%)

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A ++ ++M      P+VV +  ++    +  R D  ++++ +M+   I  D  S+  ++ 
Sbjct: 63  AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 122

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
            +    +   AL    ++   G+  D VT+N LL G   + +  E   +F QM      P
Sbjct: 123 CFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRP 182

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           N++T++TL++   + G   EA+ +     + GL+   + Y  ++D +CK G   SA++LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242

Query: 533 DEMTKEG-IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
            +M +   I PNVV Y++IID+  +               G+  ++ NL         ++
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKD--------------GRHSDAQNLFT-------EM 281

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
           QE G   +  +  +  ++      G+  +   +++L      Q+M + KI P+VVT++A+
Sbjct: 282 QEKGIFPD--LFTYNSMIVGFCSSGRWSD--AEQLL------QEMLERKISPDVVTYNAL 331

Query: 652 LNACSRCNSFEDASMLLEEL 671
           +NA  +   F +A  L +E+
Sbjct: 332 INAFVKEGKFFEAEELYDEM 351



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 148/345 (42%), Gaps = 40/345 (11%)

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           + ++   E+A+ +  +M  S      V +  L+G   +  + D V  ++++M+   +  +
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           + +++ LI  +        A+  F +  + GL  DVV ++ L+  LC    V  A++L  
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES-ANLDAMCSQDDKDVQ 592
           +M +   RPNVVT+ ++++   R               G+  E+ A LD M         
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCRE--------------GRIVEAVALLDRM--------M 211

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK-IKPNVVTFSAI 651
           E G    QI   +G +V     +G        + +  L + +KM ++  I PNVV +SAI
Sbjct: 212 EDGLQPTQI--TYGTIVDGMCKKG--------DTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 652 LNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLM 707
           +++  +     DA  L  E++   +F +      + +++G+     W  A  L  E+   
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLF--TYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 708 DSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES 752
             S     YNAL +     G+   A+ +  E   R +  N  + S
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYS 364


>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
          Length = 1429

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 217/420 (51%), Gaps = 8/420 (1%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           DY F+++ +G    W +A++ F +   R    +   ++ +A++ +LGR  +  LA  IF 
Sbjct: 158 DYCFVVKSVGQES-WQRALEVFEWLNLRHWH-SPNARMVAAILGVLGRWNQESLAVEIFT 215

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK-G 276
            A     G+ V  ++A++  Y RSG   +A  + ++M++    P+L+++N +I+A  K G
Sbjct: 216 RA-EPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSG 274

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G+     VE+ D +  +G++PD IT+N+LL+ CSR    + A  +F +M       D++T
Sbjct: 275 GLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWT 334

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN ++    +      A  +  E+  K   P+ VTY++++  +A+    +    ++ +M+
Sbjct: 335 YNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES-SGIRKDAVTYNALLGGYGKQGKY 455
            +G G D ++YNT++ +Y K G+ + AL + K+M+  SG   DA+TY  L+   GK  + 
Sbjct: 395 KMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRT 454

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            E   +  +M    + P L TYS LI  Y+K G  +EA   F    ++G K D + YS +
Sbjct: 455 VEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVM 514

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVERDLG 572
           +D L +      A  L  +M  +G  P+   Y  +I       RS   + T+ D+E   G
Sbjct: 515 LDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCG 574



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 157/684 (22%), Positives = 299/684 (43%), Gaps = 65/684 (9%)

Query: 195  LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYA-FSALISAYGRSGYCQEAISVFNS 253
            +  +M+ +  +LG  + A  +   A  +G+       ++ +I AYG+    Q+A SV  +
Sbjct: 718  VCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGN 777

Query: 254  MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
            +++    P+L T+N+++ A  + G  ++    IF+ M+R+G  P   + N LL A+C  G
Sbjct: 778  LRQSGRTPDLKTWNSLMSAYAQCGC-YERARAIFNTMMRDGPSPTVESINILLHALCVDG 836

Query: 313  GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
             L E    +  E+   G      +   +LDA  +   +    +I + M A    P +  Y
Sbjct: 837  RL-EELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLY 895

Query: 373  STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
              MI+   K  R+ DA  M SEM+     ++   +N++L +Y  +  +++ + V + ++ 
Sbjct: 896  RMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKE 955

Query: 433  SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            +G+  D  TYN L+  Y +  + +E   + +QM+   + P L TY +LI  + K    ++
Sbjct: 956  TGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQ 1015

Query: 493  AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            A Q+F E    GLK D   Y  ++     +G    A  LL  M   GI P + T + ++ 
Sbjct: 1016 AEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMV 1075

Query: 553  AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
            ++  S   +    + E+ L   K            D +V+      + +I  +       
Sbjct: 1076 SYSSSGNPQ----EAEKVLSNLK------------DTEVELTTLPYSSVIDAY------- 1112

Query: 613  AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              + K  N   + +L       +M K  ++P+   ++  + A S      +  +LL+ L 
Sbjct: 1113 -LRSKDYNSGIERLL-------EMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKAL- 1163

Query: 673  LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
              ++  + +   LL G  + +  +    F+++K ++ + A  F NAL ++LW F  +  A
Sbjct: 1164 --EDIGFDLPIRLLAGRPELLVSEVDGWFEKLKSIEDNAALNFVNALLNLLWAFELRATA 1221

Query: 733  QLVVLEGKRR--------QVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGH- 783
              V   G +R        +V +  W     D   +S GAA                EG+ 
Sbjct: 1222 SWVFQLGIKRGIFSLDVFRVADKDWGA---DFRRLSGGAA-----------LDASLEGYP 1267

Query: 784  ELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWL 843
            E PK + ++TG  +++ +    +L + ++  L  MG+PF       G  ++    +  WL
Sbjct: 1268 ESPKSVVLITGTAEYNGI----SLDKTLKACLWEMGSPFLPCKTRTGLLVAKAHSLRMWL 1323

Query: 844  RESGTLKVLVLHDDRTHSENAGFD 867
            ++S     L L D  +  E+   D
Sbjct: 1324 KDSPFCFDLELKDSVSLPESNSMD 1347



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 171/370 (46%), Gaps = 36/370 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S   R   +D A  +FE          ++ ++A+IS YGR G   EA  +F  ++ 
Sbjct: 301 NTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELEL 360

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+ VTYN+++ A  +   + + V E++  M + G   D +T+N+++ +  + G  +
Sbjct: 361 KGFFPDAVTYNSLLYAFARER-NTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLD 419

Query: 317 AARNLFNEMVH-RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            A  L+ +M    G + D  TY  L+D++ K  +   A  +M+EM    I P + TYS +
Sbjct: 420 LALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSAL 479

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I GYAKAG+ ++A + FS M   G   D ++Y+ +L +  +     +A  + ++M S G 
Sbjct: 480 ICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGH 539

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC------VSPNLL-------------- 475
                 Y  ++ G  K+ + D++++    M+  C      +S  L+              
Sbjct: 540 TPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKV 599

Query: 476 -----------TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
                      T  +++  YS  G + EA ++    K+    +  ++  ALI   CK   
Sbjct: 600 AITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCK--- 656

Query: 525 VESAVSLLDE 534
           V +  + LDE
Sbjct: 657 VNNLSAALDE 666



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 123/587 (20%), Positives = 251/587 (42%), Gaps = 85/587 (14%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++    R    +  K +++     G+G     ++ +I  YG+ G    A+ ++  MK 
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430

Query: 257 YNLK-PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            + + P+ +TY  +ID+ GK     +    +  +ML  G++P   T+++L+   ++ G  
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRTVEAAA-LMSEMLDVGIKPTLQTYSALICGYAKAGKR 489

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A + F+ M+  G   D   Y+ +LD + +G +   A+ +  +M +   +P+   Y  M
Sbjct: 490 EEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELM 549

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G  K  R DD      +M+ L  G++ +  ++VL    K   F+ A    K   ++G 
Sbjct: 550 ILGLMKENRSDDIQKTIRDMEEL-CGMNPLEISSVL---VKGECFDLAARQLKVAITNGY 605

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD----------------CVSPNL----- 474
             +  T  ++LG Y   G++ E   + E +K                  C   NL     
Sbjct: 606 ELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALD 665

Query: 475 ----------------LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
                             Y TL+        Y EA Q+F + + +G +A   +  +++  
Sbjct: 666 EYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVV 725

Query: 519 LCKNGLVESAVSLLDEMTKEGIR-PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            CK G  E+A  ++++   +G        Y  II+A+G+            + L ++ ES
Sbjct: 726 YCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGK------------QKLWQKAES 773

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
                       +++++GRT +  +K +  L++  A  G  E R R        +F  M 
Sbjct: 774 VV---------GNLRQSGRTPD--LKTWNSLMSAYAQCGCYE-RAR-------AIFNTMM 814

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQA 697
           +    P V + + +L+A       E+  +++EEL+    ++   +  L++    + + +A
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLML----DAFARA 870

Query: 698 LSLFDEVKLMDSSTASAF------YNALTDMLWHFGQKRGAQLVVLE 738
            ++F+  K+  S  A+ +      Y  + ++L    + R A+++V E
Sbjct: 871 GNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSE 917


>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
 gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
          Length = 1480

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 234/439 (53%), Gaps = 9/439 (2%)

Query: 139 DVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASA 198
           D  + D+L   + ++   D   F+++ +G    W +A++ + +   R    +   ++ S 
Sbjct: 169 DQFVADVLDDRKVQMTPTD-LCFVVKSVGQES-WHRALEVYEWLNLRH-WYSPNARMLST 225

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++S+LG+  +  LA  +F  A     GNTV  ++A++  Y R G   +   + + M+   
Sbjct: 226 ILSVLGKANQEALAVEVFMRA-EPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERG 284

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHV-VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            KP+LV++N +I+A  K G    ++ +E+ +++ R+G++PD IT+N+L++ CSR    E 
Sbjct: 285 CKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEE 344

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +F++M       D++TYN ++    +      A ++  ++ ++   P+ V+Y++++ 
Sbjct: 345 AAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLY 404

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            +A+ G ++    ++ EM  +G G D ++YNT++ +Y K G+ E AL + ++M+SSG   
Sbjct: 405 AFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNP 464

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           DAVTY  L+   GK  K  E   +  +M    V P L TYS LI  Y+K G   EA + F
Sbjct: 465 DAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETF 524

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
               ++G++ D + YS ++D   +    + A++L  EM  +GI  +    +S+ +   R+
Sbjct: 525 DCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLD----HSLYELMLRT 580

Query: 558 ATTECTVDDVERDLGKQKE 576
                 V+D+ R +   +E
Sbjct: 581 LRKVNKVEDIGRVIRDMEE 599



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 148/668 (22%), Positives = 281/668 (42%), Gaps = 61/668 (9%)

Query: 195  LASAMISILGRLGKVDLAKNIFETALNEG-YGNTVYAFSALISAYGRSGYCQEAISVFNS 253
            L  +M+ +  ++G  + A ++ + A ++G   N +  +  +I AYGR    Q+A SV  +
Sbjct: 744  LYESMVLLYCKMGFPETAHHLIDFAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGN 803

Query: 254  MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            +++  +  +   +NA+I+A    G  ++    IF+ M+R+G  P   T N LL      G
Sbjct: 804  LRQRCITVDRKVWNALIEAYAASGC-YERARAIFNTMMRDGPSPTVDTINGLLQALIVDG 862

Query: 314  LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
              +    +  E+   G      +   +LDA  +   +    +I   M A    P +  Y 
Sbjct: 863  RLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYR 922

Query: 374  TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
             M    ++  ++ D   M SEM+  G   D   +N+VL +Y  +  F + + V + ++  
Sbjct: 923  VMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKED 982

Query: 434  GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            G+  D  TYN L+  Y +  + +E   +  +M+   + P L TY +L+  + K  L ++A
Sbjct: 983  GLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQA 1042

Query: 494  MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             ++F E +  G K D   Y  ++     +G    A  L   M   G+ P + T + ++ +
Sbjct: 1043 EELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVS 1102

Query: 554  FGRSATTECTVDDVERDLGKQKES-ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
            +G S   +    + E+ L   KE+ +NL  +      D     R  +  I +      +K
Sbjct: 1103 YGSSGQPQ----EAEKVLSNLKETGSNLSTLPYSSVIDAY--LRNGDYNIGI------QK 1150

Query: 613  AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              Q KKE                     ++P+   ++  + A S      +A +LL  L+
Sbjct: 1151 LIQMKKEG--------------------LEPDHRIWTCFIRAASLSRRTSEAIVLLNALQ 1190

Query: 673  L--FDNQVYGVAHGLLMGYRDNIWVQALS-LFDEVKLMDSSTASAFYNALTDMLWHFGQK 729
               FD  +       L+  +    V AL    + ++ ++ + A  F NAL D+LW F  +
Sbjct: 1191 DAGFDLPIR------LLTEKPESLVSALDRCLEMLETLEDNAAFNFVNALEDLLWAFELR 1244

Query: 730  RGAQLVVLEGKRRQVWE----------NVWSESCLDLHLMSSGAARAMVHAWLLNIHSIV 779
              A  V     +++++           N W  S   + +++    +        ++    
Sbjct: 1245 ATASWVFQLAIKKRIYRHDVFRHADKSNKWQSSMSPIQMLNVTIQKENNDK--KDLLDAS 1302

Query: 780  FEG-HELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPM 838
             +G  E PK + ++TG  +++ V  D  L+      L  MG+PF       G  I+    
Sbjct: 1303 LQGCPESPKSVVLITGTAEYNMVSLDSTLK----ACLWEMGSPFLPCKSRSGLLIAKAHS 1358

Query: 839  VASWLRES 846
            +  WL++S
Sbjct: 1359 LRMWLKDS 1366



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 204/451 (45%), Gaps = 60/451 (13%)

Query: 109 HFGRPKIAM-STRHSVVA---EEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLR 164
           H+  P   M ST  SV+    +EAL  V  F R + S G+ ++           Y  ++ 
Sbjct: 214 HWYSPNARMLSTILSVLGKANQEALA-VEVFMRAEPSAGNTVQV----------YNAMMG 262

Query: 165 ELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE-- 222
               RG ++K  +      +R  + +    L S    I  RL    +  N+    LNE  
Sbjct: 263 VYARRGRFNKVQELLDLMRERGCKPD----LVSFNTLINARLKAGAMMPNLAIELLNEVR 318

Query: 223 --GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDF 280
             G       ++ LISA  R+   +EA  VF+ M+ ++ +P+L TYNA+I   G+ G+  
Sbjct: 319 RSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSG 378

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           K   ++F+D+   G  PD +++NSLL   +R G  E  + ++ EMV  G  +D  TYNT+
Sbjct: 379 K-AEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTM 437

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +    K  Q +LA ++  +M +   +P+ VTY+ +ID   K  ++ +A  + SEM   G+
Sbjct: 438 IHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGV 497

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
                +Y+ ++  YAK G+  EA      M  SGIR                        
Sbjct: 498 KPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIR------------------------ 533

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
                      P+ L YS ++D++ +    K AM +++E    G+  D  LY  ++  L 
Sbjct: 534 -----------PDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLR 582

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           K   VE    ++ +M +E    N  T +SI+
Sbjct: 583 KVNKVEDIGRVIRDM-EEICGMNTQTISSIL 612



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/467 (23%), Positives = 198/467 (42%), Gaps = 20/467 (4%)

Query: 101  STRFVSKMHFGRPKIAMSTRHSVVA-------EEALHHVTAFARDDVSLGDILKKFEFKL 153
            +++  S M F   K + S   S+V         E  HH+  FA  D   G +L       
Sbjct: 726  ASQVFSDMRFCGIKASESLYESMVLLYCKMGFPETAHHLIDFAESD---GILLNNISL-- 780

Query: 154  CGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK 213
                 Y  ++   G    W KA +  A  +++     D+ K+ +A+I      G  + A+
Sbjct: 781  -----YVNVIEAYGRLKLWQKA-ESVAGNLRQRCITVDR-KVWNALIEAYAASGCYERAR 833

Query: 214  NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
             IF T + +G   TV   + L+ A    G   E   V   ++    K +  +   ++DA 
Sbjct: 834  AIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAF 893

Query: 274  GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
             + G  F+ V +I+  M   G  P    +  +  + SRG        + +EM   G   D
Sbjct: 894  ARAGNIFE-VKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPD 952

Query: 334  IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
            +  +N++L             ++   +    + P+  TY+T+I  Y +  R ++  ++  
Sbjct: 953  LSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMH 1012

Query: 394  EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            EM+  G+     +Y ++++ + K    E+A  + +E++S G + D   Y+ ++  Y   G
Sbjct: 1013 EMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSG 1072

Query: 454  KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
             + +  R+F  MK   V P + T   L+  Y   G  +EA ++    K+ G     + YS
Sbjct: 1073 SHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYS 1132

Query: 514  ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            ++IDA  +NG     +  L +M KEG+ P+   +   I A   S  T
Sbjct: 1133 SVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRIWTCFIRAASLSRRT 1179



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 119/479 (24%), Positives = 213/479 (44%), Gaps = 41/479 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI + G+ G+ +LA  ++    + G       ++ LI + G++    EA  V + M  
Sbjct: 435 NTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLN 494

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +KP L TY+A+I    K G   +   E FD MLR+G++PD + ++ +L +  R    +
Sbjct: 495 TGVKPTLKTYSALICGYAKAGKPVE-AEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPK 553

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L+ EM+H GI  D   Y  +L  + K  +++    ++ +M  +    N  T S+++
Sbjct: 554 RAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRDM-EEICGMNTQTISSIL 612

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
               K    D+A  M          +DR +  ++LS Y+  GR  EAL + + ++    R
Sbjct: 613 ---VKGECYDEAAKMLRRAISDHFEIDRENLLSILSSYSSSGRHAEALDLLEFLKEHSPR 669

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              +   AL+    K  + D   + +   +    + +   + +LI    +  L  EA Q+
Sbjct: 670 SSQMITEALVVMLCKAQQLDAALKEYSNNRELGFTGSFTMFESLIQCCLENELITEASQV 729

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT-YNSIIDAFG 555
           F + +  G+KA   LY +++   CK G  E+A  L+D    +GI  N ++ Y ++I+A+G
Sbjct: 730 FSDMRFCGIKASESLYESMVLLYCKMGFPETAHHLIDFAESDGILLNNISLYVNVIEAYG 789

Query: 556 RSATTECTVDDVERDLGKQKES--ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
           R              L ++ ES   NL   C   D+             KV+  L+   A
Sbjct: 790 R------------LKLWQKAESVAGNLRQRCITVDR-------------KVWNALIEAYA 824

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             G  E R R        +F  M +    P V T + +L A       ++  ++++EL+
Sbjct: 825 ASGCYE-RAR-------AIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQ 875


>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 1270; Flags: Precursor
 gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1440

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 217/420 (51%), Gaps = 8/420 (1%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           DY F+++ +G    W +A++ F +   R    +   ++ +A++ +LGR  +  LA  IF 
Sbjct: 158 DYCFVVKSVGQES-WQRALEVFEWLNLRHWH-SPNARMVAAILGVLGRWNQESLAVEIFT 215

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK-G 276
            A     G+ V  ++A++  Y RSG   +A  + ++M++    P+L+++N +I+A  K G
Sbjct: 216 RA-EPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSG 274

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G+     VE+ D +  +G++PD IT+N+LL+ CSR    + A  +F +M       D++T
Sbjct: 275 GLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWT 334

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN ++    +      A  +  E+  K   P+ VTY++++  +A+    +    ++ +M+
Sbjct: 335 YNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES-SGIRKDAVTYNALLGGYGKQGKY 455
            +G G D ++YNT++ +Y K G+ + AL + K+M+  SG   DA+TY  L+   GK  + 
Sbjct: 395 KMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRT 454

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            E   +  +M    + P L TYS LI  Y+K G  +EA   F    ++G K D + YS +
Sbjct: 455 VEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVM 514

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVERDLG 572
           +D L +      A  L  +M  +G  P+   Y  +I       RS   + T+ D+E   G
Sbjct: 515 LDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCG 574



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 159/684 (23%), Positives = 304/684 (44%), Gaps = 54/684 (7%)

Query: 195  LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYA-FSALISAYGRSGYCQEAISVFNS 253
            +  +M+ +  +LG  + A  +   A  +G+       ++ +I AYG+    Q+A SV  +
Sbjct: 718  VCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGN 777

Query: 254  MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
            +++    P+L T+N+++ A  + G  ++    IF+ M+R+G  P   + N LL A+C  G
Sbjct: 778  LRQSGRTPDLKTWNSLMSAYAQCGC-YERARAIFNTMMRDGPSPTVESINILLHALCVDG 836

Query: 313  GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
             L E    +  E+   G      +   +LDA  +   +    +I + M A    P +  Y
Sbjct: 837  RL-EELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLY 895

Query: 373  STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
              MI+   K  R+ DA  M SEM+     ++   +N++L +Y  +  +++ + V + ++ 
Sbjct: 896  RMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKE 955

Query: 433  SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            +G+  D  TYN L+  Y +  + +E   + +QM+   + P L TY +LI  + K    ++
Sbjct: 956  TGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQ 1015

Query: 493  AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            A Q+F E    GLK D   Y  ++     +G    A  LL  M   GI P + T + ++ 
Sbjct: 1016 AEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMV 1075

Query: 553  AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
            ++  S   +    + E+ L   K            D +V+      + +I  +       
Sbjct: 1076 SYSSSGNPQ----EAEKVLSNLK------------DTEVELTTLPYSSVIDAY------- 1112

Query: 613  AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              + K  N   + +L       +M K  ++P+   ++  + A S      +  +LL+ L 
Sbjct: 1113 -LRSKDYNSGIERLL-------EMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKAL- 1163

Query: 673  LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
              ++  + +   LL G  + +  +    F+++K ++ + A  F NAL ++LW F  +  A
Sbjct: 1164 --EDIGFDLPIRLLAGRPELLVSEVDGWFEKLKSIEDNAALNFVNALLNLLWAFELRATA 1221

Query: 733  QLVVLEGKRR--------QVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGH- 783
              V   G +R        +V +  W     D   +S GAA   +  WL ++     EG+ 
Sbjct: 1222 SWVFQLGIKRGIFSLDVFRVADKDWGA---DFRRLSGGAALVALTLWLDHMQDASLEGYP 1278

Query: 784  ELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWL 843
            E PK + ++TG  +++ +    +L + ++  L  MG+PF       G  ++    +  WL
Sbjct: 1279 ESPKSVVLITGTAEYNGI----SLDKTLKACLWEMGSPFLPCKTRTGLLVAKAHSLRMWL 1334

Query: 844  RESGTLKVLVLHDDRTHSENAGFD 867
            ++S     L L D  +  E+   D
Sbjct: 1335 KDSPFCFDLELKDSVSLPESNSMD 1358



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 171/370 (46%), Gaps = 36/370 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S   R   +D A  +FE          ++ ++A+IS YGR G   EA  +F  ++ 
Sbjct: 301 NTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELEL 360

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+ VTYN+++ A  +   + + V E++  M + G   D +T+N+++ +  + G  +
Sbjct: 361 KGFFPDAVTYNSLLYAFARER-NTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLD 419

Query: 317 AARNLFNEMVH-RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            A  L+ +M    G + D  TY  L+D++ K  +   A  +M+EM    I P + TYS +
Sbjct: 420 LALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSAL 479

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I GYAKAG+ ++A + FS M   G   D ++Y+ +L +  +     +A  + ++M S G 
Sbjct: 480 ICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGH 539

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC------VSPNLL-------------- 475
                 Y  ++ G  K+ + D++++    M+  C      +S  L+              
Sbjct: 540 TPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKV 599

Query: 476 -----------TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
                      T  +++  YS  G + EA ++    K+    +  ++  ALI   CK   
Sbjct: 600 AITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCK--- 656

Query: 525 VESAVSLLDE 534
           V +  + LDE
Sbjct: 657 VNNLSAALDE 666



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 123/587 (20%), Positives = 251/587 (42%), Gaps = 85/587 (14%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++    R    +  K +++     G+G     ++ +I  YG+ G    A+ ++  MK 
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430

Query: 257 YNLK-PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            + + P+ +TY  +ID+ GK     +    +  +ML  G++P   T+++L+   ++ G  
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRTVE-AAALMSEMLDVGIKPTLQTYSALICGYAKAGKR 489

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A + F+ M+  G   D   Y+ +LD + +G +   A+ +  +M +   +P+   Y  M
Sbjct: 490 EEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELM 549

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G  K  R DD      +M+ L  G++ +  ++VL    K   F+ A    K   ++G 
Sbjct: 550 ILGLMKENRSDDIQKTIRDMEEL-CGMNPLEISSVL---VKGECFDLAARQLKVAITNGY 605

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD----------------CVSPNL----- 474
             +  T  ++LG Y   G++ E   + E +K                  C   NL     
Sbjct: 606 ELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALD 665

Query: 475 ----------------LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
                             Y TL+        Y EA Q+F + + +G +A   +  +++  
Sbjct: 666 EYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVV 725

Query: 519 LCKNGLVESAVSLLDEMTKEGIR-PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            CK G  E+A  ++++   +G        Y  II+A+G+            + L ++ ES
Sbjct: 726 YCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGK------------QKLWQKAES 773

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
                       +++++GRT +  +K +  L++  A  G  E R R        +F  M 
Sbjct: 774 VV---------GNLRQSGRTPD--LKTWNSLMSAYAQCGCYE-RAR-------AIFNTMM 814

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQA 697
           +    P V + + +L+A       E+  +++EEL+    ++   +  L++    + + +A
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLML----DAFARA 870

Query: 698 LSLFDEVKLMDSSTASAF------YNALTDMLWHFGQKRGAQLVVLE 738
            ++F+  K+  S  A+ +      Y  + ++L    + R A+++V E
Sbjct: 871 GNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSE 917


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 237/500 (47%), Gaps = 48/500 (9%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G +   M  I   +  +DL + + E +        V  +SA+I +  + G   +A ++F 
Sbjct: 223 GTIVDGMCKIGDTVSALDLLRKMEEIS---HIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279

Query: 253 SMKRYNLKPNLVTYNA-VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
            M+   + P+L TYN+ ++  C  G   +    ++  +ML   + PD +T+N+L+    +
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSG--RWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            G +  A  L++EM+ RGI  +  TY++++D  CK  ++D A  +   M  K  SPN++T
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           ++T+IDGY  A R+DD + +  EM   G+  D  +YNT++  +  +G    AL + +EM 
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA-----------DCVSPNLLTYSTL 480
           SSG+  D VT + LL G    GK  +   MF+ M+            + V P++ TY+ L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I      G + EA +++ E    G+  D + YS++ID LCK   ++ A  + D M  +  
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
            PNVVT+ ++I+ + ++      VDD             L+  C    + +     T   
Sbjct: 578 SPNVVTFTTLINGYCKAGR----VDD------------GLELFCEMGRRGIVANAITYIT 621

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           +I  F      K G           I   L +FQ+M    + P+ +T   +L        
Sbjct: 622 LICGF-----RKVGN----------INGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666

Query: 661 FEDASMLLEELRLFDNQVYG 680
            + A  +LE+L++  +  +G
Sbjct: 667 LKRAVAMLEKLQMSMDLSFG 686



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 244/500 (48%), Gaps = 39/500 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++ ++ R+ + DL  ++++    +     +Y+F+ LI  +        A+S F  + +  
Sbjct: 85  LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLG 144

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
           L P++VT+N ++   C +  V     + +F  M     +P+ +TF +L+  +C  G + E
Sbjct: 145 LHPDVVTFNTLLHGLCVEDRV--SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA-KNISPNVVTYSTM 375
           A   L + M+  G+     TY T++D +CK      A +++ +M    +I PNVV YS +
Sbjct: 203 AVA-LLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAI 261

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID   K GR  DA N+F+EM+  GI  D  +YN+++  +   GR+ +A  + +EM    I
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VTYNAL+  + K+GK+ E   ++++M    + PN +TYS++ID + K      A  
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F      G   +++ ++ LID  C    ++  + LL EMT+ G+  +  TYN++I  F 
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 556 RSATTECTVDDVER---------------------DLGKQKESANLDAMCSQDDKDVQEA 594
                   +D ++                      D GK K++  +  +  +  KD+ +A
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL-DA 500

Query: 595 GRTDNQI---IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
               N +   ++ +  L++    +GK         L    ++++M    I P+ +T+S++
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGK--------FLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 652 LNACSRCNSFEDASMLLEEL 671
           ++   + +  ++A+ + + +
Sbjct: 553 IDGLCKQSRLDEATQMFDSM 572



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 183/389 (47%), Gaps = 16/389 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  ++    + G WS A Q     ++R  + +      +A+I+   + GK   A+ +++ 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLER--KISPDVVTYNALINAFVKEGKFFEAEELYDE 350

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            L  G       +S++I  + +      A  +F  M      PNL+T+N +ID  CG   
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D    +E+  +M   G+  D  T+N+L+      G   AA +L  EM+  G+  DI T 
Sbjct: 411 ID--DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 338 NTLLDAICKGAQMDLAFEIMAEM-----------PAKNISPNVVTYSTMIDGYAKAGRLD 386
           +TLLD +C   ++  A E+   M           P   + P+V TY+ +I G    G+  
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A  ++ EM   GI  D ++Y++++    K  R +EA  +   M S     + VT+  L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GY K G+ D+   +F +M    +  N +TY TLI  + K G    A+ IF+E   +G+ 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEM 535
            D +    ++  L     ++ AV++L+++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 146/279 (52%), Gaps = 7/279 (2%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
            +  +++F DMLR+   P  + F  L+ V  R    +   +L+ +M  + I  DI+++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+   C  +++  A     ++    + P+VVT++T++ G     R+ +ALN+F +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK----Y 455
              + V++ T+++   + GR  EA+ +   M   G++   +TY  ++ G  K G      
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D +R+M E      + PN++ YS +ID   K G + +A  +F E ++ G+  D+  Y+++
Sbjct: 240 DLLRKMEEISH---IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           I   C +G    A  LL EM +  I P+VVTYN++I+AF
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 152/320 (47%), Gaps = 32/320 (10%)

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A ++ ++M      P+VV +  ++    +  R D  ++++ +M+   I  D  S+  ++ 
Sbjct: 63  AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 122

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
            +    +   AL    ++   G+  D VT+N LL G   + +  E   +F QM      P
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRP 182

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           N++T++TL++   + G   EA+ +     + GL+   + Y  ++D +CK G   SA+ LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLL 242

Query: 533 DEMTK-EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
            +M +   I PNVV Y++IID+  +               G+  ++ NL         ++
Sbjct: 243 RKMEEISHIIPNVVIYSAIIDSLCKD--------------GRHSDAQNLFT-------EM 281

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
           QE G   +  +  +  ++      G+  +   +++L      Q+M + KI P+VVT++A+
Sbjct: 282 QEKGIFPD--LFTYNSMIVGFCSSGRWSD--AEQLL------QEMLERKISPDVVTYNAL 331

Query: 652 LNACSRCNSFEDASMLLEEL 671
           +NA  +   F +A  L +E+
Sbjct: 332 INAFVKEGKFFEAEELYDEM 351



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 147/345 (42%), Gaps = 40/345 (11%)

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           + ++   E+A+ +  +M  S      V +  L+G   +  + D V  ++++M+   +  +
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           + +++ LI  +        A+  F +  + GL  DVV ++ L+  LC    V  A++L  
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES-ANLDAMCSQDDKDVQ 592
           +M +   RPNVVT+ ++++   R               G+  E+ A LD M         
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCRE--------------GRIVEAVALLDRM--------M 211

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK-IKPNVVTFSAI 651
           E G    QI   +G +V      G        + +  L + +KM ++  I PNVV +SAI
Sbjct: 212 EDGLQPTQI--TYGTIVDGMCKIG--------DTVSALDLLRKMEEISHIIPNVVIYSAI 261

Query: 652 LNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLM 707
           +++  +     DA  L  E++   +F +      + +++G+     W  A  L  E+   
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLF--TYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 708 DSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES 752
             S     YNAL +     G+   A+ +  E   R +  N  + S
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYS 364



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 57/294 (19%), Positives = 119/294 (40%), Gaps = 69/294 (23%)

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P+++ +  L+ V  +       + ++++ ++  ++ D+  ++ LI   C    +  A+S 
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
             ++TK G+ P+VVT+N++                             L  +C +D   V
Sbjct: 137 FGKITKLGLHPDVVTFNTL-----------------------------LHGLCVED--RV 165

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
            EA       + +F Q+          E  CR                   PNVVTF+ +
Sbjct: 166 SEA-------LNLFHQMF---------ETTCR-------------------PNVVTFTTL 190

Query: 652 LNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNI--WVQALSLFDEVKLMDS 709
           +N   R     +A  LL+ +     Q   + +G ++     I   V AL L  +++ +  
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISH 250

Query: 710 STAS-AFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSG 762
              +   Y+A+ D L   G+   AQ +  E + + ++ ++++ + + +   SSG
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 210/400 (52%), Gaps = 11/400 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +T L+  L   GE+++A++ F   V R  + +      + +I+ L ++G+   A  + + 
Sbjct: 164 FTTLINGLCKAGEFAQALELFDDMVARGCQPDVYT--YTTIINGLCKMGETAAAAGLIKK 221

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G    V  +S LI +  +     EA+ +F+ MK   + P +V+Y ++I    +G  
Sbjct: 222 MGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLI----QGLC 277

Query: 279 DF---KHVVEIFDDMLRNGVQPDRITFNSLLAV-CSRGGLWEAARNLFNEMVHRGIDQDI 334
            F   K    + ++M    + PD +TF+ L+ + C  G + EA + +   M   G++ ++
Sbjct: 278 SFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEA-QGVLKTMTEMGVEPNV 336

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TYN+L+       ++  A ++   M  +   P+V +YS +I+GY    R+D+A  +F+E
Sbjct: 337 ITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNE 396

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G+  + VSY T++  + +LG+  EA  + K+M ++G   D  TY+ LL G+ KQG 
Sbjct: 397 MIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGY 456

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
             +  R+F  M+   + PNL+ Y+ LID   K G    A ++F E    GL+ DV +Y+ 
Sbjct: 457 LGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTT 516

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +I+ LCK GL++ A+    +M ++G  PN  +YN II  F
Sbjct: 517 IINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGF 556



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 175/334 (52%), Gaps = 1/334 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G        + LI+ +    +     SV   + +  L+P ++T+  +I+   K G +F  
Sbjct: 121 GLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAG-EFAQ 179

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            +E+FDDM+  G QPD  T+ +++    + G   AA  L  +M   G   D+ TY+TL+D
Sbjct: 180 ALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLID 239

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           ++CK   ++ A +I + M AK ISP VV+Y+++I G     R  +A  M +EM  L I  
Sbjct: 240 SLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMP 299

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D V+++ ++ I+ K G   EA  V K M   G+  + +TYN+L+ GY  Q +  E R++F
Sbjct: 300 DIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLF 359

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           + M      P++ +YS LI+ Y       EA Q+F E    GL  + V Y+ LI A C+ 
Sbjct: 360 DVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQL 419

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           G +  A  L  +M   G  P++ TY+ +++ F +
Sbjct: 420 GKLREARELFKDMHTNGYLPDLCTYSVLLEGFCK 453



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 187/360 (51%), Gaps = 1/360 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+    +  VDL  ++    +  G   T+  F+ LI+   ++G   +A+ +F+ M    
Sbjct: 132 LINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARG 191

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +P++ TY  +I+   K G +      +   M   G QPD +T+++L+    +  L   A
Sbjct: 192 CQPDVYTYTTIINGLCKMG-ETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEA 250

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            ++F+ M  +GI   + +Y +L+  +C  ++   A  ++ EM + NI P++VT+S +ID 
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDI 310

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           + K G + +A  +   M  +G+  + ++YN+++  Y+      EA  +   M + G + D
Sbjct: 311 FCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPD 370

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
             +Y+ L+ GY    + DE +++F +M    ++PN ++Y+TLI  + + G  +EA ++F+
Sbjct: 371 VFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFK 430

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +    G   D+  YS L++  CK G +  A  L   M    ++PN+V Y  +ID+  +S 
Sbjct: 431 DMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSG 490



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 203/392 (51%), Gaps = 13/392 (3%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKV 209
           C  D YT+  ++  L   GE + A    A  +K+      Q  +   S +I  L +   V
Sbjct: 192 CQPDVYTYTTIINGLCKMGETAAA----AGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLV 247

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
           + A +IF     +G   TV ++++LI         +EA ++ N M   N+ P++VT++ +
Sbjct: 248 NEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLL 307

Query: 270 IDA-CGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           ID  C +G V + + V++   +M   GV+P+ IT+NSL+   S       AR LF+ M+ 
Sbjct: 308 IDIFCKEGNVLEAQGVLKTMTEM---GVEPNVITYNSLMHGYSLQMEVVEARKLFDVMIT 364

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           RG   D+F+Y+ L++  C   ++D A ++  EM  + ++PN V+Y+T+I  + + G+L +
Sbjct: 365 RGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLRE 424

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +F +M   G   D  +Y+ +L  + K G   +A  + + M+ + ++ + V Y  L+ 
Sbjct: 425 ARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILID 484

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
              K G  +  R++F ++    + P++  Y+T+I+   K GL  EA++ FR+ ++ G   
Sbjct: 485 SMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPP 544

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +   Y+ +I    ++     AV L+ EM  +G
Sbjct: 545 NEFSYNVIIRGFLQHKDESRAVQLIGEMRDKG 576



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 221/496 (44%), Gaps = 51/496 (10%)

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           F+ ML     P  I FN LL A+      ++A  +L  +M   G+  +  T N L++  C
Sbjct: 78  FNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFC 137

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
               +DL F ++A++    + P ++T++T+I+G  KAG    AL +F +M   G   D  
Sbjct: 138 LMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVY 197

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y T+++   K+G    A  + K+M   G + D VTY+ L+    K    +E   +F  M
Sbjct: 198 TYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYM 257

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           KA  +SP +++Y++LI        +KEA  +  E     +  D+V +S LID  CK G V
Sbjct: 258 KAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNV 317

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAF--------GRSATTECTVDDVERDLGKQKES 577
             A  +L  MT+ G+ PNV+TYNS++  +         R           + D+      
Sbjct: 318 LEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSIL 377

Query: 578 ANLDAMCSQDDKDVQ------EAGRTDNQI-----IKVFGQLVAEKAGQ---------GK 617
            N   M  + D+  Q        G T N +     I  F QL   +  +         G 
Sbjct: 378 INGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGY 437

Query: 618 KENRCRQEIL----CILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
             + C   +L    C  G       +F+ M    +KPN+V ++ ++++  +  +   A  
Sbjct: 438 LPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARK 497

Query: 667 LLEELRLF----DNQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAF-YNALT 720
           L  EL +     D Q+Y  + +GL    ++ +  +AL  F +++  D    + F YN + 
Sbjct: 498 LFSELFVHGLQPDVQIYTTIINGLC---KEGLLDEALEAFRKME-EDGCPPNEFSYNVII 553

Query: 721 -DMLWHFGQKRGAQLV 735
              L H  + R  QL+
Sbjct: 554 RGFLQHKDESRAVQLI 569



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 140/285 (49%), Gaps = 9/285 (3%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK-HVVE- 285
           +  FS LI  + + G   EA  V  +M    ++PN++TYN+++      G   +  VVE 
Sbjct: 301 IVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMH-----GYSLQMEVVEA 355

Query: 286 --IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
             +FD M+  G +PD  +++ L+         + A+ LFNEM+H+G+  +  +Y TL+ A
Sbjct: 356 RKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHA 415

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C+  ++  A E+  +M      P++ TYS +++G+ K G L  A  +F  M+   +  +
Sbjct: 416 FCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPN 475

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V Y  ++    K G    A  +  E+   G++ D   Y  ++ G  K+G  DE    F 
Sbjct: 476 LVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFR 535

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           +M+ D   PN  +Y+ +I  + +      A+Q+  E +  G  AD
Sbjct: 536 KMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 116/231 (50%), Gaps = 3/231 (1%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ +F+  +  G    V+++S LI+ Y       EA  +FN M    L PN V+Y  +I 
Sbjct: 355 ARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIH 414

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGI 330
           A  + G   +   E+F DM  NG  PD  T++ LL   C +G L +A R LF  M    +
Sbjct: 415 AFCQLG-KLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFR-LFRAMQGTYL 472

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             ++  Y  L+D++CK   ++ A ++ +E+    + P+V  Y+T+I+G  K G LD+AL 
Sbjct: 473 KPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALE 532

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            F +M+  G   +  SYN ++  + +      A+ +  EM   G   D  T
Sbjct: 533 AFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583


>gi|242032435|ref|XP_002463612.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
 gi|241917466|gb|EER90610.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
          Length = 638

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 164/604 (27%), Positives = 279/604 (46%), Gaps = 63/604 (10%)

Query: 321 LFNEMVHRG---IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           LF EM H     +  D+ TYNTLL A    +  D +  ++  M    +SP+ V+Y  ++D
Sbjct: 5   LFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLRTMLEAGVSPDTVSYRYIVD 64

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            +A AG L     +FSEM  +G   D  +Y  ++  + ++G   EA+ V ++M++ G   
Sbjct: 65  AFASAGNLSRVAELFSEMAVMGNTADASAYLGLMEAHTRVGATAEAVAVLRQMQADGCAP 124

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
            A TY  LL  YG+QG++D VR +F +M+   V P+  TY+ L  VY  GG +KE +++F
Sbjct: 125 TAATYRVLLDLYGRQGRFDGVRELFREMRT-AVPPDTATYNVLFRVYGDGGFFKEVVELF 183

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            +  + G++ D+V    ++ A  + GL E A  +L+ MT+EG+ P    Y  +++A G +
Sbjct: 184 HDMLETGVEPDMVTCENVMAACGRGGLHEDAREVLEYMTREGMVPTADAYTGLVEALGHA 243

Query: 558 ATTE--CTVDDVERDLGK--------------------QKESANLDAMCS----QDDKDV 591
           A  E      ++  ++G                     Q+  A    M +    Q +KD 
Sbjct: 244 AMYEEAYVAFNMMTEIGSLPTLETYNTLAFAYARGGLFQEAEAIFSRMSNNAGIQKNKDS 303

Query: 592 QEA-------GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV-------FQKMH 637
            +A       G   +  +K + ++   +    ++         CI GV       F+++ 
Sbjct: 304 FDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQ 363

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL-FDNQVYGVAHGLLMG-YRDNIWV 695
                P+++ +  +L+  +R + + DA  +LEE++    +  + V   L+ G Y D+   
Sbjct: 364 SSVTLPSIIAYCMMLSLYARNDRWADAYDMLEEMKTNRASSTHQVIASLIKGEYDDSSNW 423

Query: 696 QALSLFDEVKLMDSSTASA-FYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES-- 752
           Q +    E   M+    S  F+NAL D+LW FGQK  A  V+ +  +  ++  ++ ++  
Sbjct: 424 QMVEYALENSTMEGCDYSLRFFNALLDVLWWFGQKGRAARVLDQAVQFGLFPELYRDTKL 483

Query: 753 --CLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRA 810
              LD+H MS G A   V  WL  ++  + E  +LP+L S++   G+  K      L  A
Sbjct: 484 VWSLDVHRMSVGGALVAVSVWLNKLYDRLVEDEDLPQLASVVVLRGEMEKSTITRGLPTA 543

Query: 811 VEV---LLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDDRTHSENAGFD 867
             V   L   + A F     N GR I     + S L+     K+    D    S  AGF 
Sbjct: 544 KVVYSFLNDTLSASFHFPKWNKGRIIC----LKSQLK-----KLQSAVDSSNGSPAAGFV 594

Query: 868 EMLN 871
            M+N
Sbjct: 595 PMMN 598



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 176/370 (47%), Gaps = 19/370 (5%)

Query: 196 ASAMISIL---GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           ASA + ++    R+G    A  +      +G   T   +  L+  YGR G       +F 
Sbjct: 91  ASAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRELFR 150

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            M R  + P+  TYN +    G GG  FK VVE+F DML  GV+PD +T  +++A C RG
Sbjct: 151 EM-RTAVPPDTATYNVLFRVYGDGGF-FKEVVELFHDMLETGVEPDMVTCENVMAACGRG 208

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD---LAFEIMAEMPAKNISPNV 369
           GL E AR +   M   G+      Y  L++A+   A  +   +AF +M E+ +    P +
Sbjct: 209 GLHEDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSL---PTL 265

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMK-FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
            TY+T+   YA+ G   +A  +FS M    GI  ++ S++ ++  Y +  + ++A+    
Sbjct: 266 ETYNTLAFAYARGGLFQEAEAIFSRMSNNAGIQKNKDSFDALIEAYCQGAQLDDAVKAYM 325

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
           EM  S    D  +   +L  Y   G  DE +  FE++++    P+++ Y  ++ +Y++  
Sbjct: 326 EMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTLPSIIAYCMMLSLYARND 385

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALI----DALCKNGLVESAVSLLDEMTKEGIRPNV 544
            + +A  +  E K     +   + ++LI    D      +VE A   L+  T EG   ++
Sbjct: 386 RWADAYDMLEEMKTNRASSTHQVIASLIKGEYDDSSNWQMVEYA---LENSTMEGCDYSL 442

Query: 545 VTYNSIIDAF 554
             +N+++D  
Sbjct: 443 RFFNALLDVL 452



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 145/325 (44%), Gaps = 3/325 (0%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           ++ L++A        ++  +  +M    + P+ V+Y  ++DA    G +   V E+F +M
Sbjct: 24  YNTLLAAAAVRSLADQSEMLLRTMLEAGVSPDTVSYRYIVDAFASAG-NLSRVAELFSEM 82

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
              G   D   +  L+   +R G    A  +  +M   G      TY  LLD   +  + 
Sbjct: 83  AVMGNTADASAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRF 142

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           D   E+  EM    + P+  TY+ +   Y   G   + + +F +M   G+  D V+   V
Sbjct: 143 DGVRELFREMRTA-VPPDTATYNVLFRVYGDGGFFKEVVELFHDMLETGVEPDMVTCENV 201

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           ++   + G  E+A  V + M   G+   A  Y  L+   G    Y+E    F  M     
Sbjct: 202 MAACGRGGLHEDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGS 261

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIF-REFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            P L TY+TL   Y++GGL++EA  IF R    AG++ +   + ALI+A C+   ++ AV
Sbjct: 262 LPTLETYNTLAFAYARGGLFQEAEAIFSRMSNNAGIQKNKDSFDALIEAYCQGAQLDDAV 321

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAF 554
               EM K    P+  +   +++A+
Sbjct: 322 KAYMEMRKSRFNPDERSLEGVLNAY 346


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 225/465 (48%), Gaps = 45/465 (9%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA-VIDACGKGGVDFKHVVEI 286
           V  +SA+I +  + G   +A ++F  M+   + P+L TYN+ ++  C  G   +    ++
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG--RWSDAEQL 312

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             +ML   + PD +T+N+L+    + G +  A  L++EM+ RGI  +  TY++++D  CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++D A  +   M  K  SPN++T++T+IDGY  A R+DD + +  EM   G+  D  +
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNT++  +  +G    AL + +EM SSG+  D VT + LL G    GK  +   MF+ M+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 467 A-----------DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
                       + V P++ TY+ LI      G + EA +++ E    G+  D + YS++
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           ID LCK   ++ A  + D M  +   PNVVT+ ++I+ + ++      VDD         
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR----VDD--------- 599

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
               L+  C    + +     T   +I  F      K G           I   L +FQ+
Sbjct: 600 ---GLELFCEMGRRGIVANAITYITLICGF-----RKVGN----------INGALDIFQE 641

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG 680
           M    + P+ +T   +L         + A  +LE+L++  +  +G
Sbjct: 642 MISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMDLSFG 686



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 195/371 (52%), Gaps = 12/371 (3%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + SA+I  L + G+   A+N+F     +G    ++ ++++I  +  SG   +A  +   M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               + P++VTYNA+I+A  K G  F    E++D+ML  G+ P+ IT++S++    +   
Sbjct: 317 LERKISPDVVTYNALINAFVKEG-KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +AA ++F  M  +G   ++ T+NTL+D  C   ++D   E++ EM    +  +  TY+T
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS- 433
           +I G+   G L+ AL++  EM   G+  D V+ +T+L      G+ ++AL + K M+ S 
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 434 ----------GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
                     G+  D  TYN L+ G   +GK+ E   ++E+M    + P+ +TYS++ID 
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K     EA Q+F          +VV ++ LI+  CK G V+  + L  EM + GI  N
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 544 VVTYNSIIDAF 554
            +TY ++I  F
Sbjct: 616 AITYITLICGF 626



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 241/495 (48%), Gaps = 32/495 (6%)

Query: 184 KREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
           ++ ERK  +  + S   +I       K+  A + F      G    V  F+ L+      
Sbjct: 103 QKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVE 162

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
               EA+  F+ M     +PN+VT+  +++  C +G +     V + D M+ +G+QP +I
Sbjct: 163 DRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRI--VEAVALLDRMMEDGLQPTQI 220

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           T+ +++    + G   +A NL  +M     I  ++  Y+ ++D++CK  +   A  +  E
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M  K I P++ TY++MI G+  +GR  DA  +  EM    I  D V+YN +++ + K G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
           F EA  +  EM   GI  + +TY++++ G+ KQ + D    MF  M     SPNL+T++T
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LID Y       + M++  E  + GL AD   Y+ LI      G + +A+ LL EM   G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           + P++VT ++++D                 D GK K++  +  +  +  KD+ +A    N
Sbjct: 461 LCPDIVTCDTLLDGLC--------------DNGKLKDALEMFKVMQKSKKDL-DASHPFN 505

Query: 600 QI---IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
            +   ++ +  L++    +GK         L    ++++M    I P+ +T+S++++   
Sbjct: 506 GVEPDVQTYNILISGLINEGK--------FLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 657 RCNSFEDASMLLEEL 671
           + +  ++A+ + + +
Sbjct: 558 KQSRLDEATQMFDSM 572



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 183/389 (47%), Gaps = 16/389 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  ++    + G WS A Q     ++R  + +      +A+I+   + GK   A+ +++ 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLER--KISPDVVTYNALINAFVKEGKFFEAEELYDE 350

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            L  G       +S++I  + +      A  +F  M      PNL+T+N +ID  CG   
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D    +E+  +M   G+  D  T+N+L+      G   AA +L  EM+  G+  DI T 
Sbjct: 411 ID--DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 338 NTLLDAICKGAQMDLAFEIMAEM-----------PAKNISPNVVTYSTMIDGYAKAGRLD 386
           +TLLD +C   ++  A E+   M           P   + P+V TY+ +I G    G+  
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A  ++ EM   GI  D ++Y++++    K  R +EA  +   M S     + VT+  L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GY K G+ D+   +F +M    +  N +TY TLI  + K G    A+ IF+E   +G+ 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEM 535
            D +    ++  L     ++ AV++L+++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 140/270 (51%), Gaps = 12/270 (4%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           ++D    +       G       ++ LI  +   G    A+ +   M    L P++VT +
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLR-----------NGVQPDRITFNSLLAVCSRGGLWE 316
            ++D     G   K  +E+F  M +           NGV+PD  T+N L++     G + 
Sbjct: 470 TLLDGLCDNG-KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L+ EM HRGI  D  TY++++D +CK +++D A ++   M +K+ SPNVVT++T+I
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY KAGR+DD L +F EM   GI  + ++Y T++  + K+G    AL + +EM SSG+ 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
            D +T   +L G   + +      M E+++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 145/276 (52%), Gaps = 1/276 (0%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
            +  +++F DMLR+   P  + F  L+ V  R    +   +L+ +M  + I  DI+++N 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+   C  +++  A     ++    + P+VVT++T++ G     R+ +AL+ F +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
              + V++ T+++   + GR  EA+ +   M   G++   +TY  ++ G  K+G      
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 460 RMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            +  +M +   + PN++ YS +ID   K G + +A  +F E ++ G+  D+  Y+++I  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            C +G    A  LL EM +  I P+VVTYN++I+AF
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 152/320 (47%), Gaps = 32/320 (10%)

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A ++ ++M      P+VV +  ++    +  R D  ++++ +M+   I  D  S+N ++ 
Sbjct: 63  AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
            +    +   AL    ++   G+  D VT+  LL G   + +  E    F QM      P
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRP 182

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           N++T++TL++   + G   EA+ +     + GL+   + Y  ++D +CK G   SA++LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242

Query: 533 DEMTKEG-IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
            +M +   I PNVV Y++IID+  +               G+  ++ NL         ++
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKD--------------GRHSDAQNLFT-------EM 281

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
           QE G   +  +  +  ++      G+  +   +++L      Q+M + KI P+VVT++A+
Sbjct: 282 QEKGIFPD--LFTYNSMIVGFCSSGRWSD--AEQLL------QEMLERKISPDVVTYNAL 331

Query: 652 LNACSRCNSFEDASMLLEEL 671
           +NA  +   F +A  L +E+
Sbjct: 332 INAFVKEGKFFEAEELYDEM 351



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/345 (22%), Positives = 146/345 (42%), Gaps = 40/345 (11%)

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           + ++   E+A+ +  +M  S      V +  L+G   +  + D V  ++++M+   +  +
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           + +++ LI  +        A+  F +  + GL  DVV ++ L+  LC    V  A+    
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES-ANLDAMCSQDDKDVQ 592
           +M +   RPNVVT+ ++++   R               G+  E+ A LD M         
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCRE--------------GRIVEAVALLDRM--------M 211

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK-IKPNVVTFSAI 651
           E G    QI   +G +V     +G        + +  L + +KM ++  I PNVV +SAI
Sbjct: 212 EDGLQPTQI--TYGTIVDGMCKKG--------DTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 652 LNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLM 707
           +++  +     DA  L  E++   +F +      + +++G+     W  A  L  E+   
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLF--TYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 708 DSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES 752
             S     YNAL +     G+   A+ +  E   R +  N  + S
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYS 364


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 182/334 (54%), Gaps = 1/334 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G+   +  F++L+  +      ++A+++F+ +     +PN+VTY  +I    K      H
Sbjct: 147 GFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNR-HLNH 205

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            VEIF+ M  NG++P+ +T+NSL++     G W  A  L  +M+ RGI  ++ T+  L+D
Sbjct: 206 AVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALID 265

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A  K  ++  A E+   M   ++ P+V TY+ +I+G    GRLD+A  MF  M+  G   
Sbjct: 266 AFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYP 325

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           + V+Y T++  + K  R E+   +  EM   G+  + +TY  L+ GY   G+ D  + +F
Sbjct: 326 NEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVF 385

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            QM +    P++ TY+ L+D     G  ++A+ IF+  ++  +  ++V Y+ +I  +CK 
Sbjct: 386 NQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKV 445

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           G VE A  L   +  +G++PNV+TY ++I  F R
Sbjct: 446 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 479



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 176/336 (52%), Gaps = 1/336 (0%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           +++ A  +F+  +  G+   V  ++ LI    ++ +   A+ +FN M    ++PN+VTYN
Sbjct: 167 RIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYN 226

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           +++    + G  +     +  DM++ G+QP+ ITF +L+    + G    A+ L+  M+ 
Sbjct: 227 SLVSGLCEIG-RWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQ 285

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
             +  D+FTY  L++ +C   ++D A ++   M +    PN VTY+T+I G+ K+ R++D
Sbjct: 286 MSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVED 345

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
              +F EM   G+  + ++Y  ++  Y  +GR + A  V  +M S     D  TYN LL 
Sbjct: 346 GTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLD 405

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           G    G  ++   +F+ M+   +  N++TY+ +I    K G  ++A  +F      G+K 
Sbjct: 406 GLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKP 465

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           +V+ Y+ +I   C+ G +  A +L  +M ++G  PN
Sbjct: 466 NVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 206/446 (46%), Gaps = 32/446 (7%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           ++  F+ L+S   +       IS+F  M+   + P L T N V++   +     +     
Sbjct: 81  SIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASC-F 139

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M++ G +PD +TF SLL         E A  LF+++V  G   ++ TY TL+  +CK
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              ++ A EI  +M    I PNVVTY++++ G  + GR  DA  +  +M   GI  + ++
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +  ++  + K+G+  EA  + K M    +  D  TY AL+ G    G+ DE R+MF  M+
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           ++   PN +TY+TLI  + K    ++  +IF E  Q GL A+ + Y+ LI   C  G  +
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPD 379

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A  + ++M      P++ TYN ++D         C    VE+ L   K          +
Sbjct: 380 VAQEVFNQMGSRRAPPDIRTYNVLLDGL-------CYNGYVEKALMIFKYM-------RK 425

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
            + D+          I  +  ++      GK E+           +F  +    +KPNV+
Sbjct: 426 REMDIN---------IVTYTIIIQGMCKVGKVEDA--------FDLFCSLFSKGMKPNVI 468

Query: 647 TFSAILNACSRCNSFEDASMLLEELR 672
           T++ +++   R     +A  L ++++
Sbjct: 469 TYTTMISGFCRRGFIHEADALFKKMK 494



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 196/405 (48%), Gaps = 24/405 (5%)

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G   + F   +++F  M+ +   P  + F  LL+V ++   ++   +LF +M   GI   
Sbjct: 57  GLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPV 116

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++T N +++ +C+ +Q   A   + +M      P++VT+++++ G+    R++DAL +F 
Sbjct: 117 LYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFD 176

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           ++  +G   + V+Y T++    K      A+ +  +M  +GIR + VTYN+L+ G  + G
Sbjct: 177 QIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIG 236

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           ++ +   +   M    + PN++T++ LID + K G   EA ++++   Q  +  DV  Y+
Sbjct: 237 RWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYT 296

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           ALI+ LC  G ++ A  +   M   G  PN VTY ++I  F +S   E     +  ++ +
Sbjct: 297 ALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVE-DGTKIFYEMSQ 355

Query: 574 QKESAN-------LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
           +   AN       +   C     DV +         +VF Q+ + +A    +      + 
Sbjct: 356 KGLVANTITYTVLIQGYCLVGRPDVAQ---------EVFNQMGSRRAPPDIRTYNVLLDG 406

Query: 627 LCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           LC  G       +F+ M K ++  N+VT++ I+    +    EDA
Sbjct: 407 LCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDA 451



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 156/310 (50%), Gaps = 3/310 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L +   ++ A  IF    + G    V  +++L+S     G   +A  +   M +
Sbjct: 191 TTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMK 250

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             ++PN++T+ A+IDA  K G       E++  M++  V PD  T+ +L+  +C+ G L 
Sbjct: 251 RGIQPNVITFTALIDAFVKVG-KIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLD 309

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E AR +F  M   G   +  TY TL+   CK  +++   +I  EM  K +  N +TY+ +
Sbjct: 310 E-ARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVL 368

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I GY   GR D A  +F++M       D  +YN +L      G  E+AL++ K M    +
Sbjct: 369 IQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREM 428

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + VTY  ++ G  K GK ++   +F  + +  + PN++TY+T+I  + + G   EA  
Sbjct: 429 DINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADA 488

Query: 496 IFREFKQAGL 505
           +F++ K+ G 
Sbjct: 489 LFKKMKEDGF 498



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 185/408 (45%), Gaps = 45/408 (11%)

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           Q + A ++   M      P++V ++ ++   AK  R D  +++F +M+ LGI     + N
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            V++   +  +   A     +M   G   D VT+ +LL G+    + ++   +F+Q+   
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
              PN++TY+TLI    K      A++IF +    G++ +VV Y++L+  LC+ G    A
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
             LL +M K GI+PNV+T+ ++IDAF +              +GK  E+  L  +     
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVK--------------VGKIMEAKELYKVM---- 283

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
             +Q +   D   +  +  L+      G+ +   RQ       +F  M      PN VT+
Sbjct: 284 --IQMSVYPD---VFTYTALINGLCTYGRLD-EARQ-------MFYLMESNGYYPNEVTY 330

Query: 649 SAILNACSRCNSFEDASMLLEELR---LFDNQV-YGVAHGLLMGY----RDNIWVQALSL 700
           + +++   +    ED + +  E+    L  N + Y V   L+ GY    R ++   A  +
Sbjct: 331 TTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTV---LIQGYCLVGRPDV---AQEV 384

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENV 748
           F+++    +      YN L D L + G    A ++    ++R++  N+
Sbjct: 385 FNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINI 432



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 135/279 (48%), Gaps = 9/279 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   G WS A       +KR  + N      +A+I    ++GK+  AK +++ 
Sbjct: 225 YNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT--FTALIDAFVKVGKIMEAKELYKV 282

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +       V+ ++ALI+     G   EA  +F  M+     PN VTY  +I    K   
Sbjct: 283 MIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKS-- 340

Query: 279 DFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
             K V    +IF +M + G+  + IT+  L+      G  + A+ +FN+M  R    DI 
Sbjct: 341 --KRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIR 398

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYN LLD +C    ++ A  I   M  + +  N+VTY+ +I G  K G+++DA ++F  +
Sbjct: 399 TYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSL 458

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
              G+  + ++Y T++S + + G   EA  + K+M+  G
Sbjct: 459 FSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDG 497


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 212/407 (52%), Gaps = 11/407 (2%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILG--RLGKVDLA 212
           D +TF  L+  L      S+A+      V R   K  Q  L +  I + G  + G +DLA
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVA----LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
            ++ +          V  ++ +I A        +A+++F  M    ++PN+VTYN++I  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 273 -CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            C  G   +     +  DM+   + P+ +TF++L+    + G    A  L++EM+ R ID
Sbjct: 301 LCNYG--RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            DIFTY++L++  C   ++D A  +   M +K+  PNVVTY+T+I G+ KA R+D+ + +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F EM   G+  + V+Y T++  + +    + A +V K+M S G+  D +TY+ LL G   
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            GK +    +FE ++   + P++ TY+ +I+   K G  ++   +F      G+K +VV 
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           Y+ ++   C+ GL E A +L  EM +EG  P+  TYN++I A  R  
Sbjct: 539 YTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 189/333 (56%), Gaps = 3/333 (0%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
            +  +++   + G    A+S+   M++  ++P +V YN +IDA C    V+    + +F 
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN--DALNLFT 280

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +M   G++P+ +T+NSL+      G W  A  L ++M+ R I+ ++ T++ L+DA  K  
Sbjct: 281 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 340

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++  A ++  EM  ++I P++ TYS++I+G+    RLD+A +MF  M       + V+YN
Sbjct: 341 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T++  + K  R +E + + +EM   G+  + VTY  L+ G+ +  + D  + +F+QM +D
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V P+++TYS L+D     G  + A+ +F   +++ ++ D+  Y+ +I+ +CK G VE  
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             L   ++ +G++PNVVTY +++  F R    E
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 231/512 (45%), Gaps = 69/512 (13%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++S + ++ K DL  ++ E   N G  + +Y +S LI+ + R      A++V   M +
Sbjct: 85  SKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMK 144

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL---------- 306
              +P++VT N++++    G       V +   M+  G QPD  TFN+L+          
Sbjct: 145 LGYEPDIVTLNSLLNGFCHGN-RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203

Query: 307 --------------------------AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
                                      +C RG + + A +L  +M    I+  +  YNT+
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI-DLALSLLKKMEQGKIEPGVVIYNTI 262

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +DA+C    ++ A  +  EM  K I PNVVTY+++I      GR  DA  + S+M    I
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             + V+++ ++  + K G+  EA  +  EM    I  D  TY++L+ G+    + DE + 
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           MFE M +    PN++TY+TLI  + K     E M++FRE  Q GL  + V Y+ LI    
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           +    ++A  +  +M  +G+ P+++TY+ ++D    +   E  +   E  L + K   + 
Sbjct: 443 QARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY-LQRSKMEPD- 500

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
                                I  +  ++      GK E+    ++ C L +        
Sbjct: 501 ---------------------IYTYNIMIEGMCKAGKVED--GWDLFCSLSL------KG 531

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           +KPNVVT++ +++   R    E+A  L  E++
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 143/541 (26%), Positives = 256/541 (47%), Gaps = 15/541 (2%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K+D A N+F   +      ++  FS L+SA  +       IS+   M+   +  NL TY+
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 268 AVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
            +I+  C +  +     + +   M++ G +PD +T NSLL     G     A +L  +MV
Sbjct: 121 ILINCFCRRSQLSL--ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G   D FT+NTL+  + +  +   A  ++  M  K   P++VTY  +++G  K G +D
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            AL++  +M+   I    V YNT++          +AL +  EM++ GIR + VTYN+L+
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
                 G++ +  R+   M    ++PN++T+S LID + K G   EA +++ E  +  + 
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            D+  YS+LI+  C +  ++ A  + + M  +   PNVVTYN++I  F ++   +  + +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM-E 417

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
           + R++ ++    N     +      Q A   DN  I VF Q+V++             + 
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQ-ARECDNAQI-VFKQMVSDGVLPDIMTYSILLDG 475

Query: 627 LC-------ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVY 679
           LC        L VF+ + + K++P++ T++ ++    +    ED   L   L L   +  
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535

Query: 680 GVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVL 737
            V +  +M G+ R  +  +A +LF E+K       S  YN L       G K  +  ++ 
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIR 595

Query: 738 E 738
           E
Sbjct: 596 E 596



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 198/379 (52%), Gaps = 7/379 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK-LASAMISILGRLGKVDLAKNIFE 217
           Y  ++  L  RG+   A+       K E+ K + G  + + +I  L     V+ A N+F 
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLK---KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
              N+G    V  +++LI      G   +A  + + M    + PN+VT++A+IDA  K G
Sbjct: 281 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 340

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
                  +++D+M++  + PD  T++SL+   C    L EA +++F  M+ +    ++ T
Sbjct: 341 -KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA-KHMFELMISKDCFPNVVT 398

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YNTL+   CK  ++D   E+  EM  + +  N VTY+T+I G+ +A   D+A  +F +M 
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  D ++Y+ +L      G+ E AL+V + ++ S +  D  TYN ++ G  K GK +
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           +   +F  +    V PN++TY+T++  + + GL +EA  +FRE K+ G   D   Y+ LI
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578

Query: 517 DALCKNGLVESAVSLLDEM 535
            A  ++G   ++  L+ EM
Sbjct: 579 RAHLRDGDKAASAELIREM 597


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 260/518 (50%), Gaps = 44/518 (8%)

Query: 202 ILGRLGKVDLAKNIFETALN-------EGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           ILG L K+    N ++TA++        G  + +  F+ LI+ + + G+   + SVF ++
Sbjct: 62  ILGSLVKI----NCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANI 117

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            +   +PN +T   +I   C KG +     +   D ++  G   +++ + +L+    + G
Sbjct: 118 LKKGYEPNAITLTTLIKGLCLKGQI--HQALHFHDKVVALGFHLNKVCYGTLINGLCKVG 175

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
              AA  L   +  + +  ++  YNT++D++CK   ++ AF++ +EM +K ISP+VVTYS
Sbjct: 176 QTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYS 235

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I G+   G+L+DA+ +F++M    I  D  +++ ++  + K GR +EA  V   M   
Sbjct: 236 ALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQ 295

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI+ D VTY +L+ GY    + ++ + +F  M    V+ N+ +Y+ +I+ + K     EA
Sbjct: 296 GIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEA 355

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           M +F+E     +  DVV Y++LID LCK+G +  A+ L+DEM   G+  + +TYNSI+DA
Sbjct: 356 MNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDA 415

Query: 554 FGRSATTECTVDDVE--RDLGKQKE----SANLDAMCS----QDDKDVQEAGRTDNQIIK 603
             ++   +  +  +   +D G Q +    +  +D +C     +D +++ E        I 
Sbjct: 416 LCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNIT 475

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           V+   V     QG  +N    + L +L    KM      PN  T+  I+ +    +  + 
Sbjct: 476 VYTYTVMI---QGFCDNDLFDKALALL---SKMEDNGCIPNAKTYEIIILSLFEKDENDM 529

Query: 664 ASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLF 701
           A  LL E+         +A GLL G     W +A  LF
Sbjct: 530 AEKLLREM---------IARGLLFG-----WKKAYCLF 553



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 188/390 (48%), Gaps = 31/390 (7%)

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           +V  F+ +L     P    F  +L    +   ++ A +L  EM   GI  D+ T+N L++
Sbjct: 40  LVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILIN 99

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
              +      +F + A +  K   PN +T +T+I G    G++  AL+   ++  LG  L
Sbjct: 100 CFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHL 159

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           ++V Y T+++   K+G+   AL + + ++   ++ + V YN ++    K    +E   ++
Sbjct: 160 NKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY 219

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +M +  +SP+++TYS LI  +   G   +A+ +F +     +  DV  +S L+D  CK 
Sbjct: 220 SEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKE 279

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           G V+ A ++L  M K+GI+P+VVTY S++D +       C V    + + K K   N  A
Sbjct: 280 GRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGY-------CLV----KQVNKAKSIFNTMA 328

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
                   V    ++ N +I  F ++        KK +         + +F++MH   I 
Sbjct: 329 -----QGGVTANVQSYNIMINGFCKI--------KKVDEA-------MNLFKEMHCKNII 368

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELR 672
           P+VVT++++++   +      A  L++E+ 
Sbjct: 369 PDVVTYNSLIDGLCKSGKISYALKLVDEMH 398



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 84/169 (49%), Gaps = 1/169 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  L + GK+  A  + +   + G  +    +++++ A  ++    +AI++   MK 
Sbjct: 375 NSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKD 434

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P++ TY  +ID   KGG   K    IF+D+L  G      T+  ++       L++
Sbjct: 435 EGIQPDMYTYTILIDGLCKGG-RLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFD 493

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
            A  L ++M   G   +  TY  ++ ++ +  + D+A +++ EM A+ +
Sbjct: 494 KALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 225/465 (48%), Gaps = 45/465 (9%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V  +SA+I +  + G   +A ++F  M+   + P+L TYN++I   C  G   +    ++
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG--RWSDAEQL 312

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             +ML   + PD +T+N+L+    + G +  A  L++EM+ RGI  +  TY++++D  CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++D A  +   M  K  SPN++T++T+IDGY  A R+DD + +  EM   G+  D  +
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNT++  +  +G    AL + +EM SSG+  D VT + LL G    GK  +   MF+ M+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 467 A-----------DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
                       + V P++ TY+ LI      G + EA +++ E    G+  D + YS++
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           ID LCK   ++ A  + D M  +   PNVVT+ ++I+ + ++      VDD         
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR----VDD--------- 599

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
               L+  C    + +     T   +I  F      K G           I   L +FQ+
Sbjct: 600 ---GLELFCEMGRRGIVANAITYITLICGF-----RKVGN----------INGALDIFQE 641

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG 680
           M    + P+ +T   +L         + A  +LE+L++  +  +G
Sbjct: 642 MISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMDLSFG 686



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 195/371 (52%), Gaps = 12/371 (3%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + SA+I  L + G+   A+N+F     +G    ++ ++++I  +  SG   +A  +   M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               + P++VTYNA+I+A  K G  F    E++D+ML  G+ P+ IT++S++    +   
Sbjct: 317 LERKISPDVVTYNALINAFVKEG-KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +AA ++F  M  +G   ++ T+NTL+D  C   ++D   E++ EM    +  +  TY+T
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS- 433
           +I G+   G L+ AL++  EM   G+  D V+ +T+L      G+ ++AL + K M+ S 
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 434 ----------GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
                     G+  D  TYN L+ G   +GK+ E   ++E+M    + P+ +TYS++ID 
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K     EA Q+F          +VV ++ LI+  CK G V+  + L  EM + GI  N
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 544 VVTYNSIIDAF 554
            +TY ++I  F
Sbjct: 616 AITYITLICGF 626



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 243/500 (48%), Gaps = 39/500 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++ ++ R+ + DL  ++++    +     +Y+F+ LI  +        A+S F  + +  
Sbjct: 85  LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLG 144

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
           L P++VT+N ++   C +  V     + +F  M     +P+ +TF +L+  +C  G + E
Sbjct: 145 LHPDVVTFNTLLHGLCVEDRV--SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-PAKNISPNVVTYSTM 375
           A   L + M+  G+     TY T++D +CK      A  ++ +M    +I PNVV YS +
Sbjct: 203 AVA-LLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID   K GR  DA N+F+EM+  GI  D  +YN+++  +   GR+ +A  + +EM    I
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VTYNAL+  + K+GK+ E   ++++M    + PN +TYS++ID + K      A  
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F      G   +++ ++ LID  C    ++  + LL EMT+ G+  +  TYN++I  F 
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 556 RSATTECTVDDVER---------------------DLGKQKESANLDAMCSQDDKDVQEA 594
                   +D ++                      D GK K++  +  +  +  KD+ +A
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL-DA 500

Query: 595 GRTDNQI---IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
               N +   ++ +  L++    +GK         L    ++++M    I P+ +T+S++
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGK--------FLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 652 LNACSRCNSFEDASMLLEEL 671
           ++   + +  ++A+ + + +
Sbjct: 553 IDGLCKQSRLDEATQMFDSM 572



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 183/389 (47%), Gaps = 16/389 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  ++    + G WS A Q     ++R  + +      +A+I+   + GK   A+ +++ 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLER--KISPDVVTYNALINAFVKEGKFFEAEELYDE 350

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            L  G       +S++I  + +      A  +F  M      PNL+T+N +ID  CG   
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D    +E+  +M   G+  D  T+N+L+      G   AA +L  EM+  G+  DI T 
Sbjct: 411 ID--DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 338 NTLLDAICKGAQMDLAFEIMAEM-----------PAKNISPNVVTYSTMIDGYAKAGRLD 386
           +TLLD +C   ++  A E+   M           P   + P+V TY+ +I G    G+  
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A  ++ EM   GI  D ++Y++++    K  R +EA  +   M S     + VT+  L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GY K G+ D+   +F +M    +  N +TY TLI  + K G    A+ IF+E   +G+ 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEM 535
            D +    ++  L     ++ AV++L+++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 140/270 (51%), Gaps = 12/270 (4%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           ++D    +       G       ++ LI  +   G    A+ +   M    L P++VT +
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLR-----------NGVQPDRITFNSLLAVCSRGGLWE 316
            ++D     G   K  +E+F  M +           NGV+PD  T+N L++     G + 
Sbjct: 470 TLLDGLCDNG-KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L+ EM HRGI  D  TY++++D +CK +++D A ++   M +K+ SPNVVT++T+I
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY KAGR+DD L +F EM   GI  + ++Y T++  + K+G    AL + +EM SSG+ 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
            D +T   +L G   + +      M E+++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 145/276 (52%), Gaps = 1/276 (0%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
            +  +++F DMLR+   P  + F  L+ V  R    +   +L+ +M  + I  DI+++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+   C  +++  A     ++    + P+VVT++T++ G     R+ +ALN+F +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
              + V++ T+++   + GR  EA+ +   M   G++   +TY  ++ G  K+G      
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 460 RMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            +  +M +   + PN++ YS +ID   K G + +A  +F E ++ G+  D+  Y+++I  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            C +G    A  LL EM +  I P+VVTYN++I+AF
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 153/320 (47%), Gaps = 32/320 (10%)

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A ++ ++M      P+VV +  ++    +  R D  ++++ +M+   I  D  S+  ++ 
Sbjct: 63  AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 122

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
            +    +   AL    ++   G+  D VT+N LL G   + +  E   +F QM      P
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRP 182

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           N++T++TL++   + G   EA+ +     + GL+   + Y  ++D +CK G   SA++LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242

Query: 533 DEMTKEG-IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
            +M +   I PNVV Y++IID+  +               G+  ++ NL         ++
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKD--------------GRHSDAQNLFT-------EM 281

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
           QE G   +  +  +  ++      G+  +   +++L      Q+M + KI P+VVT++A+
Sbjct: 282 QEKGIFPD--LFTYNSMIVGFCSSGRWSD--AEQLL------QEMLERKISPDVVTYNAL 331

Query: 652 LNACSRCNSFEDASMLLEEL 671
           +NA  +   F +A  L +E+
Sbjct: 332 INAFVKEGKFFEAEELYDEM 351



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 148/345 (42%), Gaps = 40/345 (11%)

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           + ++   E+A+ +  +M  S      V +  L+G   +  + D V  ++++M+   +  +
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           + +++ LI  +        A+  F +  + GL  DVV ++ L+  LC    V  A++L  
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES-ANLDAMCSQDDKDVQ 592
           +M +   RPNVVT+ ++++   R               G+  E+ A LD M         
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCRE--------------GRIVEAVALLDRM--------M 211

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK-IKPNVVTFSAI 651
           E G    QI   +G +V     +G        + +  L + +KM ++  I PNVV +SAI
Sbjct: 212 EDGLQPTQI--TYGTIVDGMCKKG--------DTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 652 LNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLM 707
           +++  +     DA  L  E++   +F +      + +++G+     W  A  L  E+   
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLF--TYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 708 DSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES 752
             S     YNAL +     G+   A+ +  E   R +  N  + S
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYS 364


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 225/465 (48%), Gaps = 45/465 (9%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V  +SA+I +  + G   +A ++F  M+   + P+L TYN++I   C  G   +    ++
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG--RWSDAEQL 312

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             +ML   + PD +T+N+L+    + G +  A  L++EM+ RGI  +  TY++++D  CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++D A  +   M  K  SPN++T++T+IDGY  A R+DD + +  EM   G+  D  +
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNT++  +  +G    AL + +EM SSG+  D VT + LL G    GK  +   MF+ M+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 467 A-----------DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
                       + V P++ TY+ LI      G + EA +++ E    G+  D + YS++
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           ID LCK   ++ A  + D M  +   PNVVT+ ++I+ + ++      VDD         
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR----VDD--------- 599

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
               L+  C    + +     T   +I  F      K G           I   L +FQ+
Sbjct: 600 ---GLELFCEMGRRGIVANAITYITLICGF-----RKVGN----------INGALDIFQE 641

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG 680
           M    + P+ +T   +L         + A  +LE+L++  +  +G
Sbjct: 642 MISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMDLSFG 686



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 195/371 (52%), Gaps = 12/371 (3%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + SA+I  L + G+   A+N+F     +G    ++ ++++I  +  SG   +A  +   M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               + P++VTYNA+I+A  K G  F    E++D+ML  G+ P+ IT++S++    +   
Sbjct: 317 LERKISPDVVTYNALINAFVKEG-KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +AA ++F  M  +G   ++ T+NTL+D  C   ++D   E++ EM    +  +  TY+T
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS- 433
           +I G+   G L+ AL++  EM   G+  D V+ +T+L      G+ ++AL + K M+ S 
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 434 ----------GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
                     G+  D  TYN L+ G   +GK+ E   ++E+M    + P+ +TYS++ID 
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K     EA Q+F          +VV ++ LI+  CK G V+  + L  EM + GI  N
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 544 VVTYNSIIDAF 554
            +TY ++I  F
Sbjct: 616 AITYITLICGF 626



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 243/495 (49%), Gaps = 32/495 (6%)

Query: 184 KREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
           ++ ERK  +  + S   +I       K+  A + F      G    V  F+ L+      
Sbjct: 103 QKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVE 162

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
               EA+++F+ M     +PN+VT+  +++  C +G +     V + D M+ +G+QP +I
Sbjct: 163 DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRI--VEAVALLDRMMEDGLQPTQI 220

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           T+ +++    + G   +A NL  +M     I  ++  Y+ ++D++CK  +   A  +  E
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M  K I P++ TY++MI G+  +GR  DA  +  EM    I  D V+YN +++ + K G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
           F EA  +  EM   GI  + +TY++++ G+ KQ + D    MF  M     SPNL+T++T
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LID Y       + M++  E  + GL AD   Y+ LI      G + +A+ LL EM   G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           + P++VT ++++D                 D GK K++  +  +  +  KD+ +A    N
Sbjct: 461 LCPDIVTCDTLLDGLC--------------DNGKLKDALEMFKVMQKSKKDL-DASHPFN 505

Query: 600 QI---IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
            +   ++ +  L++    +GK         L    ++++M    I P+ +T+S++++   
Sbjct: 506 GVEPDVQTYNILISGLINEGK--------FLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 657 RCNSFEDASMLLEEL 671
           + +  ++A+ + + +
Sbjct: 558 KQSRLDEATQMFDSM 572



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 183/389 (47%), Gaps = 16/389 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  ++    + G WS A Q     ++R  + +      +A+I+   + GK   A+ +++ 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLER--KISPDVVTYNALINAFVKEGKFFEAEELYDE 350

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            L  G       +S++I  + +      A  +F  M      PNL+T+N +ID  CG   
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D    +E+  +M   G+  D  T+N+L+      G   AA +L  EM+  G+  DI T 
Sbjct: 411 ID--DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 338 NTLLDAICKGAQMDLAFEIMAEM-----------PAKNISPNVVTYSTMIDGYAKAGRLD 386
           +TLLD +C   ++  A E+   M           P   + P+V TY+ +I G    G+  
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A  ++ EM   GI  D ++Y++++    K  R +EA  +   M S     + VT+  L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GY K G+ D+   +F +M    +  N +TY TLI  + K G    A+ IF+E   +G+ 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEM 535
            D +    ++  L     ++ AV++L+++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 146/276 (52%), Gaps = 1/276 (0%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
            +  +++F DMLR+   P  + F  L+ V  R    +   +L+ +M  + I  DI+++N 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+   C  +++  A     ++    + P+VVT++T++ G     R+ +ALN+F +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
              + V++ T+++   + GR  EA+ +   M   G++   +TY  ++ G  K+G      
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 460 RMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            +  +M +   + PN++ YS +ID   K G + +A  +F E ++ G+  D+  Y+++I  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            C +G    A  LL EM +  I P+VVTYN++I+AF
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 140/270 (51%), Gaps = 12/270 (4%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           ++D    +       G       ++ LI  +   G    A+ +   M    L P++VT +
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLR-----------NGVQPDRITFNSLLAVCSRGGLWE 316
            ++D     G   K  +E+F  M +           NGV+PD  T+N L++     G + 
Sbjct: 470 TLLDGLCDNG-KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L+ EM HRGI  D  TY++++D +CK +++D A ++   M +K+ SPNVVT++T+I
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY KAGR+DD L +F EM   GI  + ++Y T++  + K+G    AL + +EM SSG+ 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
            D +T   +L G   + +      M E+++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 153/320 (47%), Gaps = 32/320 (10%)

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A ++ ++M      P+VV +  ++    +  R D  ++++ +M+   I  D  S+N ++ 
Sbjct: 63  AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
            +    +   AL    ++   G+  D VT+  LL G   + +  E   +F QM      P
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRP 182

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           N++T++TL++   + G   EA+ +     + GL+   + Y  ++D +CK G   SA++LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242

Query: 533 DEMTKEG-IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
            +M +   I PNVV Y++IID+  +               G+  ++ NL         ++
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKD--------------GRHSDAQNLFT-------EM 281

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
           QE G   +  +  +  ++      G+  +   +++L      Q+M + KI P+VVT++A+
Sbjct: 282 QEKGIFPD--LFTYNSMIVGFCSSGRWSD--AEQLL------QEMLERKISPDVVTYNAL 331

Query: 652 LNACSRCNSFEDASMLLEEL 671
           +NA  +   F +A  L +E+
Sbjct: 332 INAFVKEGKFFEAEELYDEM 351



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 148/345 (42%), Gaps = 40/345 (11%)

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           + ++   E+A+ +  +M  S      V +  L+G   +  + D V  ++++M+   +  +
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           + +++ LI  +        A+  F +  + GL  DVV ++ L+  LC    V  A++L  
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFH 173

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES-ANLDAMCSQDDKDVQ 592
           +M +   RPNVVT+ ++++   R               G+  E+ A LD M         
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCRE--------------GRIVEAVALLDRM--------M 211

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK-IKPNVVTFSAI 651
           E G    QI   +G +V     +G        + +  L + +KM ++  I PNVV +SAI
Sbjct: 212 EDGLQPTQI--TYGTIVDGMCKKG--------DTVSALNLLRKMEEVSHIIPNVVIYSAI 261

Query: 652 LNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLM 707
           +++  +     DA  L  E++   +F +      + +++G+     W  A  L  E+   
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLF--TYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 708 DSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES 752
             S     YNAL +     G+   A+ +  E   R +  N  + S
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYS 364


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 204/379 (53%), Gaps = 5/379 (1%)

Query: 183 VKREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           V R  ++  Q  L +   +++ L + G  DLA N+            V  F+ +I +  +
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDR 299
             +  +A+++F  M+   ++PN+VTY+++I   C  G   +    ++  DM+   + P+ 
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG--RWSDASQLLSDMIEKKINPNL 330

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           +TFN+L+    + G +  A  L+++M+ R ID DIFTYN+L++  C   ++D A ++   
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M +K+  P+VVTY+T+I G+ K+ R++D   +F EM   G+  D V+Y T++      G 
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            + A  V K+M S G+  D +TY+ LL G    GK ++   +F+ M+   +  ++  Y+T
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +I+   K G   +   +F      G+K +VV Y+ +I  LC   L++ A +LL +M ++G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570

Query: 540 IRPNVVTYNSIIDAFGRSA 558
             PN  TYN++I A  R  
Sbjct: 571 PLPNSGTYNTLIRAHLRDG 589



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 194/346 (56%), Gaps = 7/346 (2%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + +  +  G    +  +  +++   + G    A+++ N M+   ++ ++V +N +ID
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268

Query: 272 ACGKGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           +  K    ++HV   + +F +M   G++P+ +T++SL++     G W  A  L ++M+ +
Sbjct: 269 SLCK----YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            I+ ++ T+N L+DA  K  +   A ++  +M  ++I P++ TY+++++G+    RLD A
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             MF  M       D V+YNT++  + K  R E+   + +EM   G+  D VTY  L+ G
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
               G  D  +++F+QM +D V P+++TYS L+D     G  ++A+++F   +++ +K D
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + +Y+ +I+ +CK G V+    L   ++ +G++PNVVTYN++I   
Sbjct: 505 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 234/480 (48%), Gaps = 44/480 (9%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+   R  ++ LA  +    +  GY  ++   S+L++ Y       +A+++ + M    
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 259 LKPNLVTYNAVIDACGKGGVDFKH-----VVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
            +P+ +T+  +I         F H      V + D M++ G QP+ +T+  ++  +C RG
Sbjct: 186 YRPDTITFTTLIHGL------FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              + A NL N+M    I+ D+  +NT++D++CK   +D A  +  EM  K I PNVVTY
Sbjct: 240 D-TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           S++I      GR  DA  + S+M    I  + V++N ++  + K G+F EA  +  +M  
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             I  D  TYN+L+ G+    + D+ ++MFE M +    P+++TY+TLI  + K    ++
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
             ++FRE    GL  D V Y+ LI  L  +G  ++A  +  +M  +G+ P+++TY+ ++D
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
               +   E  ++  +     QK    LD                    I ++  ++   
Sbjct: 479 GLCNNGKLEKALEVFDY---MQKSEIKLD--------------------IYIYTTMIEGM 515

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              GK ++    ++ C L +        +KPNVVT++ +++        ++A  LL++++
Sbjct: 516 CKAGKVDD--GWDLFCSLSL------KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 174/339 (51%), Gaps = 1/339 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L +   VD A N+F+    +G    V  +S+LIS     G   +A  + + M  
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PNLVT+NA+IDA  K G  F    +++DDM++  + PD  T+NSL+         +
Sbjct: 324 KKINPNLVTFNALIDAFVKEG-KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A+ +F  MV +    D+ TYNTL+   CK  +++   E+  EM  + +  + VTY+T+I
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G    G  D+A  +F +M   G+  D ++Y+ +L      G+ E+AL V   M+ S I+
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D   Y  ++ G  K GK D+   +F  +    V PN++TY+T+I       L +EA  +
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
            ++ K+ G   +   Y+ LI A  ++G   ++  L+ EM
Sbjct: 563 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 188/394 (47%), Gaps = 43/394 (10%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           + +F  M+++   P  + FN LL+  ++   ++   +L  +M    I   ++TYN L++ 
Sbjct: 70  IGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINC 129

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C+ +Q+ LA  ++ +M      P++VT S++++GY    R+ DA+ +  +M  +G   D
Sbjct: 130 FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 189

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            +++ T++       +  EA+ +   M   G + + VTY  ++ G  K+G  D    +  
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLN 249

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M+A  +  +++ ++T+ID   K     +A+ +F+E +  G++ +VV YS+LI  LC  G
Sbjct: 250 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 309

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDD-VERDLGKQKESAN 579
               A  LL +M ++ I PN+VT+N++IDAF   G+    E   DD ++R +     + N
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369

Query: 580 --LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
             ++  C  D  D                     KA Q                +F+ M 
Sbjct: 370 SLVNGFCMHDRLD---------------------KAKQ----------------MFEFMV 392

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                P+VVT++ ++    +    ED + L  E+
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 155/309 (50%), Gaps = 1/309 (0%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +AI +F  M +    P++V +N ++ A  K    F  V+ + + M R  +     T+N L
Sbjct: 68  DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMK-KFDVVISLGEKMQRLEIVHGLYTYNIL 126

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    R      A  L  +M+  G +  I T ++LL+  C G ++  A  ++ +M     
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            P+ +T++T+I G     +  +A+ +   M   G   + V+Y  V++   K G  + AL 
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           +  +ME++ I  D V +N ++    K    D+   +F++M+   + PN++TYS+LI    
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
             G + +A Q+  +  +  +  ++V ++ALIDA  K G    A  L D+M K  I P++ 
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366

Query: 546 TYNSIIDAF 554
           TYNS+++ F
Sbjct: 367 TYNSLVNGF 375



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 146/323 (45%), Gaps = 31/323 (9%)

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++D A  +   M      P++V ++ ++   AK  + D  +++  +M+ L I     +YN
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +++ + +  +   AL +  +M   G     VT ++LL GY    +  +   + +QM   
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
              P+ +T++TLI          EA+ +     Q G + ++V Y  +++ LCK G  + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           ++LL++M    I  +VV +N+IID+        C    V+  L   KE            
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSL-------CKYRHVDDALNLFKE------------ 285

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
             ++  G   N +   +  L++     G+  +  +        +   M + KI PN+VTF
Sbjct: 286 --METKGIRPNVV--TYSSLISCLCSYGRWSDASQ--------LLSDMIEKKINPNLVTF 333

Query: 649 SAILNACSRCNSFEDASMLLEEL 671
           +A+++A  +   F +A  L +++
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDM 356



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 2/114 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ LL  L N G+  KA++ F +  K E + +    + + MI  + + GKVD   ++F +
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY--IYTTMIEGMCKAGKVDDGWDLFCS 530

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
              +G    V  ++ +IS        QEA ++   MK     PN  TYN +I A
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 154/568 (27%), Positives = 264/568 (46%), Gaps = 24/568 (4%)

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
           +L +  ++D A  +FE           YA++ +I  YG +G   EA  +    K     P
Sbjct: 64  VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +++ YN ++   GK     +  + IF++M R+ V P+  T+N L+ +  R G   AA  +
Sbjct: 124 SVIAYNCILTCLGKKR-RVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEI 181

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            ++M   G+  ++ T N ++D +CK  +++ A  I   M  K  +PN VT+S++IDG  K
Sbjct: 182 RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGK 241

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            GR+DDA +++ +M   G     + Y +++  + K GR E+   + KEM  +G   D   
Sbjct: 242 CGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTL 301

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
            N  +    K G+ ++ R +F ++ A    P+  +YS LI    K GL  E  ++F   K
Sbjct: 302 INTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMK 361

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + G   D   Y+A+ID  CK+G V  A  LL+EM  +G  P VVTY S+ID   +     
Sbjct: 362 EQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKID--- 418

Query: 562 CTVDDVERDLGKQKESA---NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
             +D+      + K +    N+    S  D    + GR D   + +  +L+ +       
Sbjct: 419 -RLDEAYMLFEEAKSNGIKLNVVVYSSLID-GFGKVGRIDEAYL-IMEELMQKGLTPNVY 475

Query: 619 ENRC-------RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              C        +EI   L  FQ M  LK  PN +T+S ++N   R   F  A +  +E+
Sbjct: 476 TWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEM 535

Query: 672 RLFDNQVYGVAHGLL---MGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           +    +   + +  +   +    NI ++A  LF   K       SA YNA+ + L    +
Sbjct: 536 QKLGLKPNTITYTTMISGLAKAGNI-LEASGLFSRFKANGGIPDSASYNAMIEGLSSANK 594

Query: 729 KRGAQLVVLEGKRRQVWENVWSESCLDL 756
              A  +  E + +    N+ +++C+ L
Sbjct: 595 AMDAYALFEETRLKGC--NIHTKTCVVL 620



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 155/621 (24%), Positives = 280/621 (45%), Gaps = 91/621 (14%)

Query: 137 RDDVSLGDILKKFEFKLCGADDYTFLLRELG----------NRGEWSKAIQCFAFAVKRE 186
           R+   +   ++KF+F+      YT L+ ++G                +A++   F    +
Sbjct: 27  REAFDIIQTMRKFKFRP-AFSAYTILIGKVGLMLLFPWVLCKANRLDEAVE--LFEQLEQ 83

Query: 187 ERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQE 246
            RK       + MI   G  GK D A  + E    +G   +V A++ +++  G+    +E
Sbjct: 84  NRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEE 143

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL 306
           A+ +F  MKR +  PN+ TYN +ID   + G      +EI DDM R G+ P+ +T N ++
Sbjct: 144 ALRIFEEMKR-DAVPNVPTYNILIDMLCREG-KLNAALEIRDDMERAGLFPNVLTVNIMI 201

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
               +    E A ++F  M  +    +  T+++L+D + K  ++D A+ +  +M      
Sbjct: 202 DRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHV 261

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P  + Y+++I  + K GR +D   ++ EM   G   D    NT +    K G  E+   +
Sbjct: 262 PGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRAL 321

Query: 427 CKEMESSGIRKDAVTY-----------------------------------NALLGGYGK 451
            +E+ + G   DA +Y                                   NA++ G+ K
Sbjct: 322 FREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCK 381

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            GK ++  ++ E+MK     P ++TY ++ID  +K     EA  +F E K  G+K +VV+
Sbjct: 382 SGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVV 441

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           YS+LID   K G ++ A  +++E+ ++G+ PNV T+N ++DA  ++              
Sbjct: 442 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA-------------- 487

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
               E  N   +C Q  KD++      NQI   +  L+            CR        
Sbjct: 488 ----EEINEALICFQSMKDLK---CPPNQI--TYSILI---------NGLCRVRKFNKAF 529

Query: 632 VF-QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLL 686
           VF Q+M KL +KPN +T++ +++  ++  +  +AS L    +    + D+  Y   + ++
Sbjct: 530 VFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASY---NAMI 586

Query: 687 MGYRD-NIWVQALSLFDEVKL 706
            G    N  + A +LF+E +L
Sbjct: 587 EGLSSANKAMDAYALFEETRL 607



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 161/325 (49%), Gaps = 3/325 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           + G+ +  + +F      G+     ++S LI    ++G   E   +F +MK      +  
Sbjct: 311 KAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTH 370

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            YNAVID  C  G V+     ++ ++M   G  P  +T+ S++   ++    + A  LF 
Sbjct: 371 AYNAVIDGFCKSGKVN--KAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFE 428

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           E    GI  ++  Y++L+D   K  ++D A+ IM E+  K ++PNV T++ ++D   KA 
Sbjct: 429 EAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAE 488

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            +++AL  F  MK L    ++++Y+ +++   ++ +F +A +  +EM+  G++ + +TY 
Sbjct: 489 EINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYT 548

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            ++ G  K G   E   +F + KA+   P+  +Y+ +I+  S      +A  +F E +  
Sbjct: 549 TMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLK 608

Query: 504 GLKADVVLYSALIDALCKNGLVESA 528
           G          L+DAL K   +E A
Sbjct: 609 GCNIHTKTCVVLLDALHKAECLEQA 633



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 117/544 (21%), Positives = 233/544 (42%), Gaps = 80/544 (14%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G+G +      L++   +S   +EA  +  +M+++  +P    Y  +I   GK G+    
Sbjct: 5   GFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILI---GKVGL---- 57

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
                            + F  +L   +R    + A  LF ++         + YNT++ 
Sbjct: 58  ----------------MLLFPWVLCKANR---LDEAVELFEQLEQNRKVPCAYAYNTMIM 98

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
                 + D A+ ++    AK   P+V+ Y+ ++    K  R+++AL +F EMK   +  
Sbjct: 99  GYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP- 157

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           +  +YN ++ +  + G+   AL +  +ME +G+  + +T N ++    K  K +E   +F
Sbjct: 158 NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIF 217

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           E M     +PN +T+S+LID   K G   +A  ++ +    G     ++Y++LI +  K 
Sbjct: 218 EGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKC 277

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-- 580
           G  E    +  EM   G  P++   N+ +D   ++  TE       R L ++  +     
Sbjct: 278 GRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETE-----KGRALFREINAHGFIP 332

Query: 581 DAMC-SQDDKDVQEAGRTDNQIIKVF------GQLVAEKAGQGKKENRCRQEILCILGVF 633
           DA   S     + +AG   N+  ++F      G ++   A     +  C+     +   +
Sbjct: 333 DARSYSILIHGLVKAGLA-NETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGK--VNKAY 389

Query: 634 QKMHKLKIK---PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYR 690
           Q + ++K+K   P VVT+ ++++  ++ +  ++A ML EE +   N           G +
Sbjct: 390 QLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK--SN-----------GIK 436

Query: 691 DNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
            N+ V                    Y++L D     G+   A L++ E  ++ +  NV++
Sbjct: 437 LNVVV--------------------YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 476

Query: 751 ESCL 754
            +CL
Sbjct: 477 WNCL 480



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 1/229 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++I  L ++ ++D A  +FE A + G    V  +S+LI  +G+ G   EA  +   + + 
Sbjct: 409 SVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQK 468

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            L PN+ T+N ++DA  K   +    +  F  M      P++IT++ L+    R   +  
Sbjct: 469 GLTPNVYTWNCLLDALVKAE-EINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNK 527

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A   + EM   G+  +  TY T++  + K   +  A  + +   A    P+  +Y+ MI+
Sbjct: 528 AFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIE 587

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           G + A +  DA  +F E +  G  +   +   +L    K    E+A +V
Sbjct: 588 GLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIV 636


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 191/366 (52%), Gaps = 1/366 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           AS ++    + G VD A  + +     G G     +++L+ +Y R         +   M+
Sbjct: 151 ASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEME 210

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              ++P + TY  ++D   + G D   V  ++D+M R  V  D   +++++    RGG  
Sbjct: 211 NRGVEPTVGTYTILVDGLSRAG-DISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNV 269

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  +F+E V  G++ +  TY  L++  CK  Q++ A  ++A+M  + +  N + ++TM
Sbjct: 270 RRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTM 329

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDGY + G ++ AL + + M+ +GI LD  +YNT+     ++ R E+A  +   M   G+
Sbjct: 330 IDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + V+Y  L+  + K+G   E RR+F  M+     P+++TY+ +ID Y K G  +EA +
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAER 449

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
             +E ++ GL  D+  Y+ L+   C NG V+ A+ L +EM   G +PNVV Y +++    
Sbjct: 450 FKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLA 509

Query: 556 RSATTE 561
           +   +E
Sbjct: 510 KEGRSE 515



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 185/345 (53%), Gaps = 1/345 (0%)

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
           D    + +   N G   TV  ++ L+    R+G   +  +V++ MKR N+  ++  Y+AV
Sbjct: 200 DAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAV 259

Query: 270 IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
           I+A  +GG + +   E+FD+ + +GV+P+  T+ +L+    + G  EAA  L  +M  RG
Sbjct: 260 INAYCRGG-NVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRG 318

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  +   +NT++D  C+   ++ A EI A M    I  ++ TY+T+  G  +  R++DA 
Sbjct: 319 VGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAK 378

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            +   M   G+  + VSY T++SI+AK G   EA  + ++ME  G R   VTYN ++ GY
Sbjct: 379 KLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGY 438

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            K G   E  R  ++M+   + P++ TY+ L+  +   G    A+++F E K  G K +V
Sbjct: 439 IKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNV 498

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           V Y+AL+  L K G  E A  L D+M   G+ P+   Y+ ++ + 
Sbjct: 499 VAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSL 543



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 174/322 (54%), Gaps = 3/322 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++  L R G +   + +++    +     VY +SA+I+AY R G  + A  VF+    + 
Sbjct: 224 LVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHG 283

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           ++PN  TY A+I+  C  G ++   +  +  DM   GV  ++I FN+++    R G+ E 
Sbjct: 284 VEPNERTYGALINGFCKIGQIEAAEM--LLADMQLRGVGHNQIVFNTMIDGYCRHGMVEK 341

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +   M   GI+ DI+TYNTL   +C+  +M+ A +++  M  K ++PN V+Y+T+I 
Sbjct: 342 ALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLIS 401

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            +AK G + +A  +F +M+  G     V+YN ++  Y K G   EA    KEME  G+  
Sbjct: 402 IHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVP 461

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  TY  L+ G+   GK D   R+FE+MK     PN++ Y+ L+   +K G  +EA Q++
Sbjct: 462 DIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLY 521

Query: 498 REFKQAGLKADVVLYSALIDAL 519
            +   AGL  D  LYS L+ +L
Sbjct: 522 DDMLAAGLTPDDTLYSVLVGSL 543



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/431 (24%), Positives = 205/431 (47%), Gaps = 44/431 (10%)

Query: 264 VTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           ++ + V+D  C  G VD  H   + D++ R+GV  +   +NSLL   +R    +A   L 
Sbjct: 149 LSASVVVDGFCKSGSVDDAH--GLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLL 206

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            EM +RG++  + TY  L+D + +   +     +  EM  KN++ +V  YS +I+ Y + 
Sbjct: 207 KEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRG 266

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G +  A  +F E    G+  +  +Y  +++ + K+G+ E A ++  +M+  G+  + + +
Sbjct: 267 GNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVF 326

Query: 443 NALLGGYGKQG---KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           N ++ GY + G   K  E++ + E+M    +  ++ TY+TL     +    ++A ++   
Sbjct: 327 NTMIDGYCRHGMVEKALEIKAVMEKMG---IELDIYTYNTLACGLCRVNRMEDAKKLLHI 383

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             + G+  + V Y+ LI    K G +  A  L  +M  +G RP+VVTYN +ID + ++  
Sbjct: 384 MAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKN-- 441

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
                       G  +E+           K++++ G   +  I  +  LV      GK +
Sbjct: 442 ------------GSIREAERFK-------KEMEKKGLVPD--IYTYAGLVHGHCVNGKVD 480

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----D 675
              R        +F++M     KPNVV ++A+++  ++    E+A  L +++       D
Sbjct: 481 VALR--------LFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPD 532

Query: 676 NQVYGVAHGLL 686
           + +Y V  G L
Sbjct: 533 DTLYSVLVGSL 543



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 145/288 (50%), Gaps = 15/288 (5%)

Query: 177 QCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALIS 236
           +C    V+  ER         A+I+   ++G+++ A+ +       G G+    F+ +I 
Sbjct: 278 ECVGHGVEPNERTY------GALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMID 331

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV----DFKHVVEIFDDMLR 292
            Y R G  ++A+ +   M++  ++ ++ TYN +  ACG   V    D K ++ I   M  
Sbjct: 332 GYCRHGMVEKALEIKAVMEKMGIELDIYTYNTL--ACGLCRVNRMEDAKKLLHI---MAE 386

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
            GV P+ +++ +L+++ ++ G    AR LF +M  +G    + TYN ++D   K   +  
Sbjct: 387 KGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIRE 446

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A     EM  K + P++ TY+ ++ G+   G++D AL +F EMK  G   + V+Y  ++S
Sbjct: 447 AERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVS 506

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             AK GR EEA  +  +M ++G+  D   Y+ L+G      + D + R
Sbjct: 507 GLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSRKDPLPR 554



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/410 (23%), Positives = 176/410 (42%), Gaps = 73/410 (17%)

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
           A  DL  + +A  PA +++P  ++ S ++DG+ K+G +DDA  +  E             
Sbjct: 130 AAADLLGKAIASCPA-SVTP--LSASVVVDGFCKSGSVDDAHGLLDE------------- 173

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
                                 +   G+  +A  YN+LL  Y +Q   D V  + ++M+ 
Sbjct: 174 ----------------------LPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMEN 211

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             V P + TY+ L+D  S+ G   +   ++ E K+  +  DV  YSA+I+A C+ G V  
Sbjct: 212 RGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRR 271

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
           A  + DE    G+ PN  TY ++I+ F       C +         Q E+A +       
Sbjct: 272 ASEVFDECVGHGVEPNERTYGALINGF-------CKI--------GQIEAAEMLL----- 311

Query: 588 DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL-CILGVFQKMHKLKIKPNVV 646
             D+Q  G   NQI  VF  ++         +  CR  ++   L +   M K+ I+ ++ 
Sbjct: 312 -ADMQLRGVGHNQI--VFNTMI---------DGYCRHGMVEKALEIKAVMEKMGIELDIY 359

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEV 704
           T++ +     R N  EDA  LL  +         V++  L+    ++   V+A  LF ++
Sbjct: 360 TYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDM 419

Query: 705 KLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
           +   S  +   YN + D     G  R A+    E +++ +  ++++ + L
Sbjct: 420 EGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGL 469


>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
 gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
 gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
          Length = 661

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 230/515 (44%), Gaps = 69/515 (13%)

Query: 159 YTFLLRELGN-RGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           Y+ LL  L N R     A+        RE R      L S +IS   R    D A  +  
Sbjct: 186 YSHLLASLLNTRDPPDAALLDRLLGDLRESRLEPDAPLFSDLISAFARARLPDAALELLA 245

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRYNLKPNLVTYNAVIDACGKG 276
           +A   G      A +ALIS+ G +    EA ++F        +KP    YNA++    K 
Sbjct: 246 SAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKI 305

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G   K+  ++ D+M + GV PD  T++ L+   +R G WE+AR L  EM   G+    + 
Sbjct: 306 G-SLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYV 364

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           ++ +L       +   AF ++ EM A  + P+   Y+ MID + K   L  A++ F  M+
Sbjct: 365 FSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMR 424

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             GI  D V++NT++  + K GR + A+ +  EM  S       TYN ++   G++ +++
Sbjct: 425 EEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWE 484

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
            V  M  +MK   + PN++TY+TL+DVY + G +KEA+      K  GLK    +Y AL+
Sbjct: 485 GVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALV 544

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
           +A  + GL + A++++  M  +G+  + V  NS+I+AFG                     
Sbjct: 545 NAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGE-------------------- 584

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
                                D +I + F  L      Q  KEN                
Sbjct: 585 ---------------------DRRIAEAFSVL------QFMKEN---------------- 601

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               ++P+V+T++ ++ A  R   FE   ++ EE+
Sbjct: 602 ---GLRPDVITYTTLMKALIRVEQFEKVPVIYEEM 633



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 172/339 (50%), Gaps = 1/339 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++G +  A+ + +     G       +S L+ AY R+G  + A  +   M+   +KP+  
Sbjct: 304 KIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSY 363

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
            ++ ++      G +++    +  +M  +GV+PDR  +N ++    +      A + F+ 
Sbjct: 364 VFSRILAGFRDRG-EWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDR 422

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   GI+ D+ T+NTL+DA CKG + D A E+  EM   N      TY+ MI+   +  R
Sbjct: 423 MREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQR 482

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
            +    M +EMK  G+  + ++Y T++ +Y + GRF+EA+   + M++ G++     Y+A
Sbjct: 483 WEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHA 542

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+  Y ++G  D    + + M+AD +  + +  ++LI+ + +     EA  + +  K+ G
Sbjct: 543 LVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENG 602

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           L+ DV+ Y+ L+ AL +    E    + +EM   G  P+
Sbjct: 603 LRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPD 641



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 168/323 (52%), Gaps = 5/323 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++    R G+ + A+ + +    +G   + Y FS +++ +   G  Q+A +V   M  
Sbjct: 331 SLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHA 390

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P+   YN +ID  GK      H ++ FD M   G++PD +T+N+L+    +GG  +
Sbjct: 391 SGVRPDRHFYNVMIDTFGKYNC-LGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHD 449

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF+EM          TYN +++ + +  + +    ++AEM  + + PN++TY+T++
Sbjct: 450 RAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLV 509

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y ++GR  +A++    MK  G+      Y+ +++ YA+ G  + AL V K M + G+ 
Sbjct: 510 DVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLE 569

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              V  N+L+  +G+  +  E   + + MK + + P+++TY+TL+    +   +++   I
Sbjct: 570 ASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVI 629

Query: 497 FREFKQAGL----KADVVLYSAL 515
           + E   +G     KA  +L SAL
Sbjct: 630 YEEMITSGCAPDRKARAMLRSAL 652



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 161/345 (46%), Gaps = 34/345 (9%)

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           ++ D   ++ L+ A  +    D A E++A   A  ++P     + +I     A R+ +A 
Sbjct: 217 LEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAE 276

Query: 390 NMFSEMKFLGIGLDRV-SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            +F E    G    R  +YN +L  Y K+G  + A  V  EM   G+  D  TY+ L+  
Sbjct: 277 ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDA 336

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           Y + G+++  R + ++M+AD V P+   +S ++  +   G +++A  + RE   +G++ D
Sbjct: 337 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPD 396

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
              Y+ +ID   K   +  A+   D M +EGI P+VVT+N++IDA  +            
Sbjct: 397 RHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKG----------- 445

Query: 569 RDLGKQKESANL-DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
              G+   +  L D M    + +      T N +I + G+   E+  +G           
Sbjct: 446 ---GRHDRAIELFDEM---RESNCPLGTTTYNIMINLLGE---EQRWEG----------- 485

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            +  +  +M +  + PN++T++ +++   R   F++A   +E ++
Sbjct: 486 -VEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMK 529



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 148/355 (41%), Gaps = 77/355 (21%)

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGI--RKDAVTYNALLGGYGKQGKYDEVRRMF-E 463
           ++ ++S +A+    + AL +    ++ G+  R +AVT  AL+   G   +  E   +F E
Sbjct: 224 FSDLISAFARARLPDAALELLASAQAIGLTPRSNAVT--ALISSLGSARRVAEAEALFLE 281

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
              A  + P    Y+ L+  Y K G  K A Q+  E  Q G+  D   YS L+DA  + G
Sbjct: 282 FFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAG 341

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK-QKESANLDA 582
             ESA  LL EM  +G++P+   ++ I+  F              RD G+ QK  A L  
Sbjct: 342 RWESARILLKEMEADGVKPSSYVFSRILAGF--------------RDRGEWQKAFAVLRE 387

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI---LGVFQKMHKL 639
           M +     V+      N +I  FG           K N       C+   +  F +M + 
Sbjct: 388 MHASG---VRPDRHFYNVMIDTFG-----------KYN-------CLGHAMDAFDRMREE 426

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALS 699
            I+P+VVT++ +++A   C                             G  D    +A+ 
Sbjct: 427 GIEPDVVTWNTLIDA--HCKG---------------------------GRHD----RAIE 453

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
           LFDE++  +    +  YN + ++L    +  G + ++ E K + +  N+ + + L
Sbjct: 454 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTL 508


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 203/378 (53%), Gaps = 4/378 (1%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I  L ++ ++  A+ +F+  L      ++  ++ LI  Y + G  +++  V   M
Sbjct: 589 IYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERM 648

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           K  N++P+L+T+N ++    K G+  +    +  +M   G  PD  TF+ L    S    
Sbjct: 649 KADNIEPSLITFNTLLKGLFKAGM-VEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDK 707

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +AA  ++   V  G+  + +T + LL+A+CK  Q++ A EI+    AK + PN V Y+T
Sbjct: 708 ADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNT 767

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           MIDGY++ G L  A      M+  G+  D ++YN ++  + +LG  E A     +M+  G
Sbjct: 768 MIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKG 827

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +     TYN L+GGYG++ ++D+   + ++M+ +   PN+++Y TLI+   KG    EA 
Sbjct: 828 VSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 887

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            + R+ +  G+  +V +Y+ LID  C  G +E A    +EM K+GI  N+VTYN++ID  
Sbjct: 888 IVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGL 947

Query: 555 ---GRSATTECTVDDVER 569
              G+ A  E  + ++ R
Sbjct: 948 SMNGKLAEAEDMLLEISR 965



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 144/544 (26%), Positives = 269/544 (49%), Gaps = 33/544 (6%)

Query: 180 AFAVKREERKNDQGKLASAMISILGRLGK-VDLAKNIFETALNEGYGNTVYAFSALISAY 238
           AF++     K+D    +  ++S+L    K +  A ++F    NEG   +  + + L+   
Sbjct: 471 AFSLSSPSLKHD---FSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHL 527

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
            ++   +  I+VF ++   + +P+   Y   I A  K   D    +E+F+ M  + + P 
Sbjct: 528 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLS-DVGKGLELFNRMKHDRISPT 586

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
              +N L+    +    + A  LF+EM+ R +   + TYNTL+D  CK    + +F++  
Sbjct: 587 VFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRE 646

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
            M A NI P+++T++T++ G  KAG ++DA N+ +EMK  G   D  +++ +   Y+   
Sbjct: 647 RMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSND 706

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           + + AL V +    SG++ +A T + LL    K+G+ ++   +  +  A  + PN + Y+
Sbjct: 707 KADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYN 766

Query: 479 TLIDVYS-KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           T+ID YS KG L    M+I    KQ G+K D + Y+ LI   C+ G +E+A   +++M  
Sbjct: 767 TMIDGYSRKGDLVGARMKIDAMEKQ-GMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKL 825

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESAN----LDAMCSQD---- 587
           +G+ P+V TYN +I  +GR    +   D ++   D G      +    ++ +C       
Sbjct: 826 KGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 885

Query: 588 ----DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
                +D+++ G + N  ++++  L+     +GK E+  R          ++M K  I+ 
Sbjct: 886 AQIVKRDMEDRGVSPN--VRIYNMLIDGCCSKGKIEDAFR--------FSEEMFKKGIEL 935

Query: 644 NVVTFSAILNACSRCNSFEDAS-MLLEELRLFDNQVYGVAHGLLMGYRDNIWVQ-ALSLF 701
           N+VT++ +++  S      +A  MLLE  R          + L+ GYR    VQ  ++L+
Sbjct: 936 NLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALY 995

Query: 702 DEVK 705
           +E+K
Sbjct: 996 EEMK 999



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 168/348 (48%), Gaps = 5/348 (1%)

Query: 208  KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
            K D A  ++ETA++ G     Y  S L++A  + G  ++A  +        L PN V YN
Sbjct: 707  KADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYN 766

Query: 268  AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
             +ID   + G D        D M + G++PD + +N L+      G  E A    N+M  
Sbjct: 767  TMIDGYSRKG-DLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKL 825

Query: 328  RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            +G+   + TYN L+    +  + D  F+++ EM      PNVV+Y T+I+   K  +L +
Sbjct: 826  KGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 885

Query: 388  ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
            A  +  +M+  G+  +   YN ++      G+ E+A    +EM   GI  + VTYN L+ 
Sbjct: 886  AQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLID 945

Query: 448  GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
            G    GK  E   M  ++    + P++ TY++LI  Y   G  +  + ++ E K +G+K 
Sbjct: 946  GLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKP 1005

Query: 508  DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
             +  Y  LI +LC    +E    +  EM+   ++P+++ YN ++  + 
Sbjct: 1006 TLKTYHLLI-SLCTKEGIELTKKIFGEMS---LQPDLLVYNGVLHCYA 1049



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 182/402 (45%), Gaps = 35/402 (8%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            + +I     LG ++ A+        +G   +V  ++ LI  YGR     +   +   M+ 
Sbjct: 801  NCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMED 860

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                PN+V+Y  +I+   KG    +  + +  DM   GV P+   +N L+  C   G  E
Sbjct: 861  NGTMPNVVSYGTLINCLCKGSKLLEAQI-VKRDMEDRGVSPNVRIYNMLIDGCCSKGKIE 919

Query: 317  AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
             A     EM  +GI+ ++ TYNTL+D +    ++  A +++ E+  K + P+V TY+++I
Sbjct: 920  DAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLI 979

Query: 377  DGYAKAGRLDDALNMFSEMKFLGI-----------------GL--------------DRV 405
             GY  AG +   + ++ EMK  GI                 G+              D +
Sbjct: 980  SGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLL 1039

Query: 406  SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
             YN VL  YA  G  ++A  + K+M    I  D  TYN+L+ G  K GK  EVR + ++M
Sbjct: 1040 VYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 1099

Query: 466  KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
            KA  + P   TY  ++  + +   Y  A   +RE ++ GL  DV +   L+  L +    
Sbjct: 1100 KAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRS 1159

Query: 526  ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS-ATTECTVDD 566
            + A +++ EM   G +   V  +  + A  RS    EC + D
Sbjct: 1160 KEAENVISEMN--GRKLGDVIVDEDLSATERSFENQECVLQD 1199


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 192/356 (53%), Gaps = 3/356 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++ A  +    L  G   T    + LI+ Y + G  ++A+           +P+ +TY
Sbjct: 138 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 197

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N  ++  C    V   H +++ D M++ G  PD  T+N ++    + G  E A+ + N+M
Sbjct: 198 NTFVNGLCQNDHV--GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 255

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V RG   DI T+NTL+ A+C G +++ A ++  ++  K +SP+V T++ +I+   K G  
Sbjct: 256 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 315

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             AL +F EMK  G   D V+YNT++     LG+  +AL + K+MES+G  +  +TYN +
Sbjct: 316 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 375

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K+ + +E   +F+QM    +S N +T++TLID   K     +A ++  +    GL
Sbjct: 376 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 435

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + + + Y++++   CK G ++ A  +L+ MT  G   +VVTY ++I+   ++  T+
Sbjct: 436 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 491



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 189/361 (52%), Gaps = 1/361 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +I+   +LG+V+ A    +  + +G+      ++  ++   ++ +   A+ V + M 
Sbjct: 162 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 221

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           +    P++ TYN V++   K G   +    I + M+  G  PD  TFN+L+A    G   
Sbjct: 222 QEGHDPDVFTYNIVVNCLCKNG-QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 280

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A +L  ++  +G+  D++T+N L++A+CK     LA  +  EM     +P+ VTY+T+
Sbjct: 281 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 340

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID     G+L  AL++  +M+  G     ++YNT++    K  R EEA  V  +M+  GI
Sbjct: 341 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 400

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
            ++A+T+N L+ G  K  K D+   +  QM ++ + PN +TY++++  Y K G  K+A  
Sbjct: 401 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 460

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I       G + DVV Y  LI+ LCK G  + A+ +L  M  +G+RP    YN ++ +  
Sbjct: 461 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 520

Query: 556 R 556
           R
Sbjct: 521 R 521



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 179/347 (51%), Gaps = 1/347 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + +  + EG+   V+ ++ +++   ++G  +EA  + N M      P++ T+N +I 
Sbjct: 213 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 272

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           A   G    +  +++   +   GV PD  TFN L+    + G    A  LF EM + G  
Sbjct: 273 ALCTGN-RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 331

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  TYNTL+D +C   ++  A +++ +M +     + +TY+T+IDG  K  R+++A  +
Sbjct: 332 PDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEV 391

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F +M   GI  + +++NT++    K  + ++A  +  +M S G++ + +TYN++L  Y K
Sbjct: 392 FDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK 451

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           QG   +   + E M A+    +++TY TLI+   K G  + A+++ R  +  G++     
Sbjct: 452 QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKA 511

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           Y+ ++ +L +   +  A+SL  EM + G  P+ +TY  +     R  
Sbjct: 512 YNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG 558



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 188/358 (52%), Gaps = 4/358 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +++ L + G+++ AK I    ++ G    +  F+ LI+A       +EA+ +   +    
Sbjct: 235 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 294

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
           + P++ T+N +I+A  K G D    + +F++M  +G  PD +T+N+L+  +CS G L +A
Sbjct: 295 VSPDVYTFNILINALCKVG-DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 353

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
             +L  +M   G  +   TYNT++D +CK  +++ A E+  +M  + IS N +T++T+ID
Sbjct: 354 L-DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 412

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K  ++DDA  + ++M   G+  + ++YN++L+ Y K G  ++A  + + M ++G   
Sbjct: 413 GLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 472

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D VTY  L+ G  K G+     ++   M+   + P    Y+ ++    +    ++A+ +F
Sbjct: 473 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 532

Query: 498 REFKQAGLKADVVLYSALIDALCK-NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           RE  + G   D + Y  +   LC+  G ++ A   + EM  +G  P   ++  + +  
Sbjct: 533 REMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 590



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 192/374 (51%), Gaps = 5/374 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++  L R  +V  A  + E   + G       F+ L+  +   G  + A+ V   M  
Sbjct: 93  NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 152

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
                  VT N +I+  C  G V+    +      + +G +PD+IT+N+ +  +C    +
Sbjct: 153 MGCSATKVTVNVLINGYCKLGRVE--DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 210

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             A + + + MV  G D D+FTYN +++ +CK  Q++ A  I+ +M  +   P++ T++T
Sbjct: 211 GHALK-VMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 269

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I       RL++AL++  ++   G+  D  ++N +++   K+G    AL + +EM++SG
Sbjct: 270 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 329

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D VTYN L+      GK  +   + + M++     + +TY+T+ID   K    +EA 
Sbjct: 330 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 389

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++F +    G+  + + ++ LID LCK+  ++ A  L+++M  EG++PN +TYNSI+  +
Sbjct: 390 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 449

Query: 555 GRSATTECTVDDVE 568
            +    +   D +E
Sbjct: 450 CKQGDIKKAADILE 463



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 225/476 (47%), Gaps = 51/476 (10%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G+Q D + +N LL V   G   +   ++++EM  RGI  D+ T+NTL+ A+C+  Q+  A
Sbjct: 49  GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             ++ EM ++ ++P+  T++T++ G+ + G ++ AL + + M  +G    +V+ N +++ 
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           Y KLGR E+AL   ++  + G   D +TYN  + G  +        ++ + M  +   P+
Sbjct: 169 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 228

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           + TY+ +++   K G  +EA  I  +    G   D+  ++ LI ALC    +E A+ L  
Sbjct: 229 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 288

Query: 534 EMTKEGIRPNVVTYNSIIDA-------------FGRSATTECTVDDVERD--------LG 572
           ++T +G+ P+V T+N +I+A             F     + CT D+V  +        LG
Sbjct: 289 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 348

Query: 573 KQKESANLDAMCSQDDKDVQEAGRTDNQIIK-VFGQLVAEKAGQGKKENRCRQEILCILG 631
           K  ++  LD +   +      +  T N II  +  ++  E+A +                
Sbjct: 349 KLGKA--LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE---------------- 390

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRD 691
           VF +M    I  N +TF+ +++   +    +DA  L+ ++     Q   + +  ++ +  
Sbjct: 391 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTH-- 448

Query: 692 NIWVQALSLFDEVKLMDSSTASAF------YNALTDMLWHFGQKRGAQLVVLEGKR 741
             + +   +     ++++ TA+ F      Y  L + L   G+ + A L VL G R
Sbjct: 449 --YCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA-LKVLRGMR 501



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 214/473 (45%), Gaps = 29/473 (6%)

Query: 249 SVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
           SV++ M    +KP++VT+N ++ A  +     +  V + ++M   GV PD  TF +L+  
Sbjct: 75  SVYSEMGARGIKPDVVTFNTLMKALCRAH-QVRTAVLMLEEMSSRGVAPDETTFTTLMQG 133

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
               G  EAA  +   M+  G      T N L++  CK  +++ A   + +  A    P+
Sbjct: 134 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 193

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
            +TY+T ++G  +   +  AL +   M   G   D  +YN V++   K G+ EEA  +  
Sbjct: 194 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 253

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
           +M   G   D  T+N L+       + +E   +  Q+    VSP++ T++ LI+   K G
Sbjct: 254 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 313

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
               A+++F E K +G   D V Y+ LID LC  G +  A+ LL +M   G   + +TYN
Sbjct: 314 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 373

Query: 549 SIIDAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQI 601
           +IID   +    E   ++V   +  Q  S N       +D +C   DK + +A    NQ+
Sbjct: 374 TIIDGLCKKMRIE-EAEEVFDQMDLQGISRNAITFNTLIDGLCK--DKKIDDAFELINQM 430

Query: 602 IK--------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
           I          +  ++     QG        +I     + + M     + +VVT+  ++N
Sbjct: 431 ISEGLQPNNITYNSILTHYCKQG--------DIKKAADILETMTANGFEVDVVTYGTLIN 482

Query: 654 ACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEV 704
              +    + A  +L  +R+   +    A+  ++   +R N    ALSLF E+
Sbjct: 483 GLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 535



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 106/481 (22%), Positives = 208/481 (43%), Gaps = 51/481 (10%)

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
           P   I  + V Y+ +++   +  ++    +++SEM   GI  D V++NT++    +  + 
Sbjct: 46  PLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQV 105

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
             A+L+ +EM S G+  D  T+  L+ G+ ++G  +   R+  +M     S   +T + L
Sbjct: 106 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL 165

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I+ Y K G  ++A+   ++    G + D + Y+  ++ LC+N  V  A+ ++D M +EG 
Sbjct: 166 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 225

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
            P+V TYN +++         C   + + +  K   +  +D  C  D             
Sbjct: 226 DPDVFTYNIVVN---------CLCKNGQLEEAKGILNQMVDRGCLPD------------- 263

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
            I  F  L+A      + E          L + +++    + P+V TF+ ++NA  +   
Sbjct: 264 -ITTFNTLIAALCTGNRLEEA--------LDLARQVTVKGVSPDVYTFNILINALCKVGD 314

Query: 661 FEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWV-----QALSLFDEVKLMDSSTASAF 715
              A  L EE++        V +  L+   DN+       +AL L  +++      ++  
Sbjct: 315 PHLALRLFEEMKNSGCTPDEVTYNTLI---DNLCSLGKLGKALDLLKDMESTGCPRSTIT 371

Query: 716 YNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNI 775
           YN + D L    +   A+ V  +   + +  N  + + L   L      + +  A+ L I
Sbjct: 372 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD---KKIDDAFEL-I 427

Query: 776 HSIVFEGHELPKLL--SILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFI 833
           + ++ EG +   +   SILT + K       G +++A ++L T     F V     G  I
Sbjct: 428 NQMISEGLQPNNITYNSILTHYCKQ------GDIKKAADILETMTANGFEVDVVTYGTLI 481

Query: 834 S 834
           +
Sbjct: 482 N 482



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 160/386 (41%), Gaps = 53/386 (13%)

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM--KFLGIGLDRVSYNTVLSI 413
           ++AEM  +     +    + +D Y      DDA+++         GI  D V YN +L++
Sbjct: 4   LVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNV 63

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
             +  + +    V  EM + GI+ D VT+N L+    +  +      M E+M +  V+P+
Sbjct: 64  LVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPD 123

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
             T++TL+  + + G  + A+++     + G  A  V  + LI+  CK G VE A+  + 
Sbjct: 124 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 183

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD-DKDVQ 592
           +   +G  P+ +TYN+ ++         C  D V   L        +D M  +  D DV 
Sbjct: 184 QEIADGFEPDQITYNTFVNGL-------CQNDHVGHAL------KVMDVMVQEGHDPDVF 230

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
                 N + K  GQL   K                  G+  +M      P++ TF+ ++
Sbjct: 231 TYNIVVNCLCK-NGQLEEAK------------------GILNQMVDRGCLPDITTFNTLI 271

Query: 653 NACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALS----------LFD 702
            A    N  E+A  L  ++      V GV+  +   Y  NI + AL           LF+
Sbjct: 272 AALCTGNRLEEALDLARQV-----TVKGVSPDV---YTFNILINALCKVGDPHLALRLFE 323

Query: 703 EVKLMDSSTASAFYNALTDMLWHFGQ 728
           E+K    +     YN L D L   G+
Sbjct: 324 EMKNSGCTPDEVTYNTLIDNLCSLGK 349


>gi|302808451|ref|XP_002985920.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
 gi|300146427|gb|EFJ13097.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
          Length = 574

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/524 (24%), Positives = 244/524 (46%), Gaps = 39/524 (7%)

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   D+ TY T+L  + +    D+   ++ EM  +   PNVVTY+ +I  Y +A  LD +
Sbjct: 62  GFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSS 121

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           L +F+ M+ +G   DRV+Y T++ + AK G  + A+ + ++M+ +G R D  TY+ ++  
Sbjct: 122 LKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHC 181

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            GK GK +   ++F +M     +P+L+TY+ +ID+++K G +  A++++ + ++ G   D
Sbjct: 182 LGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPD 241

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            V Y  +++ L   G +E A  + +EM + G   +   +  ++D +G++   E       
Sbjct: 242 RVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFN 301

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
           R L                D  +Q      N ++  + +     A               
Sbjct: 302 RML----------------DSGLQPNVPACNSLLSAYLRSSFYDAAG------------- 332

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM- 687
             GV   M K  + P + T++++L++C+ C +  +   L   +    +  +     LL  
Sbjct: 333 --GVLGGMAKWGLYPTLQTYTSLLSSCAACRAAWEYDALFGLMGGTGHPAHPFVCSLLAS 390

Query: 688 -GYRDNIWVQAL-SLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVW 745
            G      V  +   FD ++  +  +   F ++L D L   G+   A  V      + ++
Sbjct: 391 GGTAGGTMVVGIRCFFDAMQFEELESRRGFADSLIDFLHRAGKAVAAGSVWEVAAEKNLY 450

Query: 746 ENVWSESC-----LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSK 800
            N   E       ++LH+MS+G A   +   L      V      P  + I+TGWG+ S+
Sbjct: 451 PNAVREKAPQYWSINLHVMSTGTALVALARTLAMFAEAVVRTGAAPYRIDIITGWGRRSR 510

Query: 801 VVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLR 844
           V G   +++AVE +L  + +PF +   N+G F+  GP +A WL+
Sbjct: 511 VPGASLVKQAVEGMLRSLNSPFHLDGLNVGCFVGQGPALAEWLK 554



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 175/323 (54%), Gaps = 4/323 (1%)

Query: 202 ILGRLGKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           IL +  +  +A N F  A  + G+ + V+ ++ ++   GR+       ++ + M R   +
Sbjct: 40  ILKQQKEAGVAYNFFIWARKQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCE 99

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           PN+VTYN +I   G+   D    +++F+ M   G +PDR+T+ +L+ + ++ G  +AA  
Sbjct: 100 PNVVTYNRLIHCYGRAN-DLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAME 158

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L+ +M H G   D FTY+ ++  + K  +++ A+++  EM  +  +P++VTY+ +ID +A
Sbjct: 159 LYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHA 218

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           KAG+ D AL ++S+++ +G   DRV+Y  ++ +    G  E+A  V +EME +G   D  
Sbjct: 219 KAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNP 278

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
            +  ++  +GK G  ++  + F +M    + PN+   ++L+  Y +   Y  A  +    
Sbjct: 279 IFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGM 338

Query: 501 KQAGLKADVVLYSALID--ALCK 521
            + GL   +  Y++L+   A C+
Sbjct: 339 AKWGLYPTLQTYTSLLSSCAACR 361



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 158/300 (52%), Gaps = 3/300 (1%)

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           K+   K ++ TY  ++   G+    F  +  + D+M+R G +P+ +T+N L+    R   
Sbjct: 59  KQAGFKHDVHTYTTILGILGRAK-SFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRAND 117

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +++  LFN M   G + D  TY TL+D   K    D A E+  +M      P+  TYS 
Sbjct: 118 LDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSI 177

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I    KAG+L+ A  +F EM   G     V+YN ++ ++AK G+F+ AL +  +++  G
Sbjct: 178 IIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVG 237

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEA 493
              D VTY  ++   G  G  ++  ++FE+M +A  V+ N + +  ++D++ K G  ++A
Sbjct: 238 YAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPI-FGLMVDMWGKTGNAEKA 296

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            Q F     +GL+ +V   ++L+ A  ++   ++A  +L  M K G+ P + TY S++ +
Sbjct: 297 AQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSS 356



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 137/265 (51%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G + D  T+ ++L +  R   ++   NL +EM+  G + ++ TYN L+    +   +D +
Sbjct: 62  GFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSS 121

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
            ++   M      P+ VTY T+ID  AKAG  D A+ ++ +M+  G   D  +Y+ ++  
Sbjct: 122 LKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHC 181

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
             K G+   A  +  EM   G     VTYN ++  + K GK+D   +++  ++    +P+
Sbjct: 182 LGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPD 241

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +TY  +++V    G  ++A Q+F E ++AG  AD  ++  ++D   K G  E A    +
Sbjct: 242 RVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFN 301

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSA 558
            M   G++PNV   NS++ A+ RS+
Sbjct: 302 RMLDSGLQPNVPACNSLLSAYLRSS 326



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 151/316 (47%), Gaps = 2/316 (0%)

Query: 166 LGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYG 225
           L  + E   A   F +A K+   K+D     + ++ ILGR    D+  N+ +  + EG  
Sbjct: 41  LKQQKEAGVAYNFFIWARKQAGFKHDV-HTYTTILGILGRAKSFDVLNNLLDEMIREGCE 99

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
             V  ++ LI  YGR+     ++ +FN M+    +P+ VTY  +ID   K G      +E
Sbjct: 100 PNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFH-DAAME 158

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           ++  M   G +PD  T++ ++    + G   AA  LF EM  RG    + TYN ++D   
Sbjct: 159 LYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHA 218

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  + D+A ++ +++     +P+ VTY  +++     G ++DA  +F EM+  G   D  
Sbjct: 219 KAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNP 278

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            +  ++ ++ K G  E+A      M  SG++ +    N+LL  Y +   YD    +   M
Sbjct: 279 IFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGM 338

Query: 466 KADCVSPNLLTYSTLI 481
               + P L TY++L+
Sbjct: 339 AKWGLYPTLQTYTSLL 354



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 35/255 (13%)

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           + +G + D  TY  +LG  G+   +D +  + ++M  +   PN++TY+ LI  Y +    
Sbjct: 59  KQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDL 118

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             ++++F   +  G + D V Y  LID   K G  ++A+ L  +M   G RP+  TY+ I
Sbjct: 119 DSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSII 178

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
           I   G++                 K +A     C   D+    +  T N II +      
Sbjct: 179 IHCLGKAG----------------KLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHA---- 218

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
            KAG+              L ++  + ++   P+ VT+  I+     C   EDA  + EE
Sbjct: 219 -KAGKFDMA----------LKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEE 267

Query: 671 LR----LFDNQVYGV 681
           +     + DN ++G+
Sbjct: 268 MERAGWVADNPIFGL 282



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 91/184 (49%), Gaps = 1/184 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  LG+ GK++ A  +F    + GY  ++  ++ +I  + ++G    A+ +++ ++ 
Sbjct: 176 SIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQE 235

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+ VTY  +++  G  G   +   ++F++M R G   D   F  ++ +  + G  E
Sbjct: 236 VGYAPDRVTYGIIMEVLGNCG-HIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAE 294

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A   FN M+  G+  ++   N+LL A  + +  D A  ++  M    + P + TY++++
Sbjct: 295 KAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLL 354

Query: 377 DGYA 380
              A
Sbjct: 355 SSCA 358



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 6/214 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  ++  LGN G    A Q F   ++R     D   +   M+ + G+ G  + A   F  
Sbjct: 245 YGIIMEVLGNCGHIEDAEQVFE-EMERAGWVADN-PIFGLMVDMWGKTGNAEKAAQWFNR 302

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L+ G    V A ++L+SAY RS +   A  V   M ++ L P L TY +++ +C     
Sbjct: 303 MLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSSCAACRA 362

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG--LWEAARNLFNEMVHRGIDQDIFT 336
            +++   +F  M   G  P      SLLA     G  +    R  F+ M    ++     
Sbjct: 363 AWEYDA-LFGLMGGTG-HPAHPFVCSLLASGGTAGGTMVVGIRCFFDAMQFEELESRRGF 420

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
            ++L+D + +  +   A  +      KN+ PN V
Sbjct: 421 ADSLIDFLHRAGKAVAAGSVWEVAAEKNLYPNAV 454


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 185/354 (52%), Gaps = 3/354 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++ A+ I +    +G     Y + +LIS   + G  +EA  +F+ M    L PN VTY
Sbjct: 222 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 281

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +ID  C KG  D +      D+M++ G+ P   T+N L+      G    A ++  EM
Sbjct: 282 NTLIDGYCNKG--DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 339

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             +GI  D  TYN L++   +      AF++  EM +K I P  VTY+++I   ++  R+
Sbjct: 340 RKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 399

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            +A ++F ++   G+  D + +N ++  +   G  E A ++ KEM+   +  D VT+N L
Sbjct: 400 KEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 459

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  ++GK +E R + ++MK   + P+ ++Y+TLI  Y + G  K+A  +  E    G 
Sbjct: 460 MQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGF 519

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
              ++ Y+ALI  LCKN   + A  LL EM  +GI P+  TY S+I+  G   T
Sbjct: 520 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDT 573



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 169/315 (53%), Gaps = 1/315 (0%)

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
           G  ++A      M+    KPN+V+YN +I      G + +    I D M   G++PD  T
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG-NIEGARRILDAMRVKGIEPDSYT 245

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           + SL++   + G  E A  LF++MV  G+  +  TYNTL+D  C    ++ AF    EM 
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            K I P+V TY+ ++      GR+ +A +M  EM+  GI  D ++YN +++ Y++ G  +
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
            A  +  EM S GI    VTY +L+    ++ +  E   +FE++    VSP+++ ++ +I
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           D +   G  + A  + +E  +  +  D V ++ L+   C+ G VE A  LLDEM   GI+
Sbjct: 426 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIK 485

Query: 542 PNVVTYNSIIDAFGR 556
           P+ ++YN++I  +GR
Sbjct: 486 PDHISYNTLISGYGR 500



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 147/268 (54%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G +P+ +++N+++   S  G  E AR + + M  +GI+ D +TY +L+  +CK  +++ A
Sbjct: 203 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 262

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             +  +M    + PN VTY+T+IDGY   G L+ A +   EM   GI     +YN ++  
Sbjct: 263 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 322

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
               GR  EA  + KEM   GI  DA+TYN L+ GY + G       +  +M +  + P 
Sbjct: 323 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPT 382

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +TY++LI V S+    KEA  +F +    G+  DV++++A+ID  C NG VE A  LL 
Sbjct: 383 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLK 442

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           EM ++ + P+ VT+N+++    R    E
Sbjct: 443 EMDRKSVPPDEVTFNTLMQGRCREGKVE 470



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 178/387 (45%), Gaps = 34/387 (8%)

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           E+FD++    +  DR++  S +      G  + AR     M   G   ++ +YNT++   
Sbjct: 162 ELFDELT---LSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGY 218

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
                ++ A  I+  M  K I P+  TY ++I G  K GRL++A  +F +M  +G+  + 
Sbjct: 219 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 278

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V+YNT++  Y   G  E A     EM   GI     TYN L+     +G+  E   M ++
Sbjct: 279 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 338

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M+   + P+ +TY+ LI+ YS+ G  K A  +  E    G++   V Y++LI  L +   
Sbjct: 339 MRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 398

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           ++ A  L +++  +G+ P+V+ +N++ID         C   +VER     KE        
Sbjct: 399 MKEADDLFEKILDQGVSPDVIMFNAMIDG-------HCANGNVERAFMLLKE-------- 443

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
             D K V     T       F  L+  +  +GK E   R        +  +M    IKP+
Sbjct: 444 -MDRKSVPPDEVT-------FNTLMQGRCREGKVE-EARM-------LLDEMKXRGIKPD 487

Query: 645 VVTFSAILNACSRCNSFEDASMLLEEL 671
            ++++ +++   R    +DA  + +E+
Sbjct: 488 HISYNTLISGYGRRGDIKDAFXVRDEM 514



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 181/408 (44%), Gaps = 38/408 (9%)

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           R LF+E+    + +D  +  + +       ++  A E +  M      PNVV+Y+T+I G
Sbjct: 161 RELFDELT---LSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHG 217

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y+  G ++ A  +   M+  GI  D  +Y +++S   K GR EEA  +  +M   G+  +
Sbjct: 218 YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPN 277

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           AVTYN L+ GY  +G  +      ++M    + P++ TY+ L+      G   EA  + +
Sbjct: 278 AVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIK 337

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E ++ G+  D + Y+ LI+   + G  + A  L +EM  +GI P  VTY S+I    R  
Sbjct: 338 EMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRN 397

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
             +   D  E+ L         D   S D              + +F  ++      G  
Sbjct: 398 RMKEADDLFEKIL---------DQGVSPD--------------VIMFNAMIDGHCANGNV 434

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
           E            + ++M +  + P+ VTF+ ++    R    E+A MLL+E++    + 
Sbjct: 435 ER--------AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486

Query: 679 YGVAHGLLM---GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
             +++  L+   G R +I   A  + DE+  +  +     YNAL   L
Sbjct: 487 DHISYNTLISGYGRRGDIK-DAFXVRDEMLSIGFNPTLLTYNALIKCL 533



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 107/190 (56%), Gaps = 3/190 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I +L R  ++  A ++FE  L++G    V  F+A+I  +  +G  + A  +   M R
Sbjct: 387 TSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDR 446

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            ++ P+ VT+N ++   C +G V+   +  + D+M   G++PD I++N+L++   R G  
Sbjct: 447 KSVPPDEVTFNTLMQGRCREGKVEEARM--LLDEMKXRGIKPDHISYNTLISGYGRRGDI 504

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  + +EM+  G +  + TYN L+  +CK  + DLA E++ EM  K ISP+  TY ++
Sbjct: 505 KDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 564

Query: 376 IDGYAKAGRL 385
           I+G      L
Sbjct: 565 IEGMGNVDTL 574



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 6/224 (2%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+   R G    A ++    L++G   T   +++LI    R    +EA  +F  +    
Sbjct: 354 LINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 413

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           + P+++ +NA+ID  C  G V+      +  +M R  V PD +TFN+L+    R G  E 
Sbjct: 414 VSPDVIMFNAMIDGHCANGNVE--RAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEE 471

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           AR L +EM  RGI  D  +YNTL+    +   +  AF +  EM +   +P ++TY+ +I 
Sbjct: 472 ARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIK 531

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
              K    D A  +  EM   GI  D  +Y   LS+   +G  +
Sbjct: 532 CLCKNQEGDLAEELLKEMVNKGISPDDSTY---LSLIEGMGNVD 572


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 155/554 (27%), Positives = 253/554 (45%), Gaps = 46/554 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L R G+VD A  + +    +G    V+ +S LI  +G+   C EA  +   M  
Sbjct: 275 NVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFS 334

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             LKP  V Y A+ID   + G D      + ++ML  GV+ +  T+N+L+    + G  E
Sbjct: 335 KGLKPGHVAYTALIDGFMRQG-DSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDME 393

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L NEM+  GI  D  TYN +++   K        ++++EM   N+ P   T   +I
Sbjct: 394 KADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMII 453

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G  + G ++DA  +F  M  LG+  + V Y T++  + + GRF+EA+ + K M+  G++
Sbjct: 454 NGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQ 513

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D + YN+++ G  K  K +E +    +M    + PN+ TY  LI  Y K G  + A + 
Sbjct: 514 PDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRY 573

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F+E    G+  + V+ +ALID  CK G    A S+   M    + P+V TY+++I    R
Sbjct: 574 FKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLR 633

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
           +   +  ++ +   L                +K +     T N II  F     ++ G G
Sbjct: 634 NGKLQGAMELLSEFL----------------EKGLVPDVFTYNSIISGF----CKQGGIG 673

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
           K       E +C  G         I PN++T++A++N   +    E A        LFD 
Sbjct: 674 KAFQ--LHEYMCQKG---------ISPNIITYNALINGLCKAGEIERAR------ELFDG 716

Query: 677 -QVYGVAHG------LLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
               G+AH       ++ GY +     +A  LFDE+ L      S  Y+AL D     G 
Sbjct: 717 IPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGN 776

Query: 729 KRGAQLVVLEGKRR 742
              A  + LE  ++
Sbjct: 777 TEKALSLFLESVQK 790



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 232/496 (46%), Gaps = 32/496 (6%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           T Y    +I+   R G  ++A  VF  M    +KPN V Y  +I    + G  F+  V I
Sbjct: 445 TAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEG-RFQEAVRI 503

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M + GVQPD + +NS++    +    E A++   EM+ RG+  +++TY  L+   CK
Sbjct: 504 LKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCK 563

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +M +A     EM    I+PN V  + +IDGY K G   +A ++F  M    +  D  +
Sbjct: 564 SGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRT 623

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y+ ++    + G+ + A+ +  E    G+  D  TYN+++ G+ KQG   +  ++ E M 
Sbjct: 624 YSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMC 683

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              +SPN++TY+ LI+   K G  + A ++F      GL  + V Y+ +ID  CK+G + 
Sbjct: 684 QKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLS 743

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE----CTVDDVERDLGKQKE-SANLD 581
            A  L DEMT +G+ P+   Y+++ID   +   TE      ++ V++        +A +D
Sbjct: 744 KAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMD 803

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL----CILG------ 631
             C      V EA            QL+ +   +  K +     IL    C  G      
Sbjct: 804 GFCKSG--KVIEA-----------NQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAE 850

Query: 632 -VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG-- 688
             F  M K  + PN +T++A+L+  +      +   L +E+   D +  GV   +++   
Sbjct: 851 QFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAH 910

Query: 689 YRDNIWVQALSLFDEV 704
            ++   V+ L L D++
Sbjct: 911 LKEGDHVKTLKLVDDM 926



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 196/407 (48%), Gaps = 10/407 (2%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + +A+I    + G    A +IF   L       V  +SALI    R+G  Q A+ + +  
Sbjct: 588 VCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF 647

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
               L P++ TYN++I   C +GG+      ++ + M + G+ P+ IT+N+L+    + G
Sbjct: 648 LEKGLVPDVFTYNSIISGFCKQGGIG--KAFQLHEYMCQKGISPNIITYNALINGLCKAG 705

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             E AR LF+ +  +G+  +  TY T++D  CK   +  AF +  EM  K + P+   YS
Sbjct: 706 EIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYS 765

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +IDG  K G  + AL++F E    G      S N ++  + K G+  EA  + ++M   
Sbjct: 766 ALIDGCRKEGNTEKALSLFLESVQKGFA-STSSLNALMDGFCKSGKVIEANQLLEDMVDK 824

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            ++ D VTY  L+  + K G   E  + F  M+   + PN LTY+ L+  Y+  G   E 
Sbjct: 825 HVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEM 884

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             +F E     ++ D V +S +IDA  K G     + L+D+M K+G   +    + +ID 
Sbjct: 885 FALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDP 944

Query: 554 FGRSATTECTVDDVERDLGKQKESA-NLD-AMCSQDDKDVQEAGRTD 598
             R       V +V + L K +E   NL  A CS   +   +AG+ D
Sbjct: 945 LCRKE----HVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMD 987



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 151/303 (49%), Gaps = 4/303 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+ L + G+++ A+ +F+    +G  +    ++ +I  Y +SG   +A  +F+ M  
Sbjct: 695 NALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTL 754

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             + P+   Y+A+ID C K G + +  + +F + ++ G      + N+L+   C  G + 
Sbjct: 755 KGVPPDSFVYSALIDGCRKEG-NTEKALSLFLESVQKGFASTS-SLNALMDGFCKSGKVI 812

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA + L  +MV + +  D  TY  L+D  CK   +  A +   +M  +N+ PN +TY+ +
Sbjct: 813 EANQ-LLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTAL 871

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + GY  AGR  +   +F EM    I  D V+++ ++  + K G   + L +  +M   G 
Sbjct: 872 LSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGG 931

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
                  + L+    ++    EV ++ E+++   ++ +L T STL+  + K G    A +
Sbjct: 932 NVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAAR 991

Query: 496 IFR 498
           + +
Sbjct: 992 VLK 994



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 31/233 (13%)

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            V +  L+ GY K+G +DE    F   K +     LL  + L+    K    +   + + 
Sbjct: 166 GVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYN 225

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
              +A +  DV  Y+ LI+A  + G  +    LL EM ++G  P++VTYN +I    R+ 
Sbjct: 226 GMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRA- 284

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
                        G+  E+  L  +   D K +     T + +I  FG           K
Sbjct: 285 -------------GEVDEAFELKKL--MDKKGLVADVFTYSILIDGFG-----------K 318

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           + RC +  L +  +F K     +KP  V ++A+++   R     +A  + EE+
Sbjct: 319 QKRCTEAKLMLEEMFSK----GLKPGHVAYTALIDGFMRQGDSGEAFRVKEEM 367


>gi|255552808|ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543458|gb|EEF44989.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 654

 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 160/649 (24%), Positives = 307/649 (47%), Gaps = 61/649 (9%)

Query: 68  TSTTVAPNP----KPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTR--- 120
           +S +  P+P     P  SL  LP  KS +   FS   +TRF+  +     K  M TR   
Sbjct: 2   SSLSSFPSPMQVLDPIFSLPLLPLPKSRIYT-FSRPITTRFLL-LSSSATKRDMWTRTQK 59

Query: 121 -------HSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWS 173
                  HSV  ++ L  ++   +++V L  +L  ++ +        F++  +    +W 
Sbjct: 60  TTPSYLDHSVDMKQLLISISQ-TQNEVELYSLLSPYKERQLSI---RFMVSLISQEADWQ 115

Query: 174 KAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSA 233
           +++    + +    R +      + ++  + R  K DLA  +F+           Y +S 
Sbjct: 116 RSLALLDW-INEVARYSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYST 174

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN 293
           LI+++G++G   E++     M++  +  +LV Y+ +I+   K   D+   + IF  + R+
Sbjct: 175 LITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKL-CDYSKAISIFMRLKRS 233

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G+ PD + +NS++ V  +  L+  AR L +EM   G+  D  +Y+TLL    +  +   A
Sbjct: 234 GITPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEA 293

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             + AEM   N S +++T + MID Y +   + +A  +F  M+ +GI  + VSYNT+L +
Sbjct: 294 LSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKV 353

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           Y +   F EA+ + + M+   I ++ VTYN ++  YGK  ++++   + ++M+   + PN
Sbjct: 354 YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPN 413

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +TYST+I ++ K G    A  +F++ + +G++ D VLY  +I A  + GLV  A  LL 
Sbjct: 414 AITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLH 473

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
           ++      P+++  ++ I    R+              G+ +E+  +        +   +
Sbjct: 474 DLKC----PDIIPRDTAIKILARA--------------GRIEEATWV-------FRQAFD 508

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
           AG   +  I VF  ++   +   +  N        ++ VF+KM      P+    + +LN
Sbjct: 509 AGEVKD--ISVFRCMIELFSRNKRPAN--------VVEVFEKMRGAGYFPDSDVIALVLN 558

Query: 654 ACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWVQAL 698
           A  +   FE A  +  E++    +F ++V+     L    +D I V++L
Sbjct: 559 AYGKLREFEKADAVYREMQEEECVFPDEVHFQMLSLYGARKDFIMVESL 607



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/346 (21%), Positives = 171/346 (49%), Gaps = 13/346 (3%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI + G+L  V  A  +F +    G    V +++ L+  YG +    EAI +F  M+R  
Sbjct: 315 MIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKE 374

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           ++ N+VTYN +I   GK  ++ +    +  +M + G++P+ IT+++++++  + G  + A
Sbjct: 375 IEQNVVTYNTMIKIYGKS-LEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRA 433

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             LF ++   G++ D   Y T++ A  +   +  A  ++ ++      P+++   T I  
Sbjct: 434 AMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLKC----PDIIPRDTAIKI 489

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
            A+AGR+++A  +F +    G   D   +  ++ ++++  R    + V ++M  +G   D
Sbjct: 490 LARAGRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEVFEKMRGAGYFPD 549

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMK-ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +     +L  YGK  ++++   ++ +M+  +CV P+ + +  L    S  G  K+ + + 
Sbjct: 550 SDVIALVLNAYGKLREFEKADAVYREMQEEECVFPDEVHFQML----SLYGARKDFIMVE 605

Query: 498 REFKQAGLKADV---VLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
             F++     ++    L+  +     +   +  A  +++ M+KEG+
Sbjct: 606 SLFEKLDSDPNINKKELHLVVASIYERQNRLNDASRIMNRMSKEGM 651


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 198/396 (50%), Gaps = 2/396 (0%)

Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETAL 220
            L+  L    +  +A   F  A +   R        +A+++ L    +VDLA+  F +AL
Sbjct: 124 MLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSAL 183

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGV- 278
                  +Y F+ +IS   R G  ++A  V   +K + L P++ TYN++ID  C KGG  
Sbjct: 184 RRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAG 243

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           +  HV  +  +M+  G+ P  +TF  L+    +     AA  +F EM  +GI   + TYN
Sbjct: 244 NMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYN 303

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L+  +C   +++   ++M EM    +SPN +T+  ++ G+ K G + DA +    M   
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            +  D V Y  ++  Y +LG+ E+A+ V + M   GI  +  TYN L+ G+ + G +   
Sbjct: 364 NVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + ++MK   +  +++TY+ LI      G  ++A+++  E  + GL+ + + Y+ +I  
Sbjct: 424 SGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQG 483

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            C  G ++SA  +   M K   R NVVTYN  I  F
Sbjct: 484 FCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 151/325 (46%), Gaps = 34/325 (10%)

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P+  + + ++ G   A R+D A   F       +  D  ++NTV+S   ++G+  +A  V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDE---VRRMFEQMKADCVSPNLLTYSTLIDV 483
            K++++ G+     TYN+L+ GY K+G       V  + ++M    +SP  +T+  LI+ 
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y K      A+++F E KQ G+ A VV Y++LI  LC  G VE  V L++EM   G+ PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
            +T+  ++  F +        D ++   G  + +   D                    + 
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWID---GMTERNVEPD--------------------VV 370

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           ++  L+      GK E+         + V + M K  I PNV T++ ++   SR   +  
Sbjct: 371 IYTILIDGYRRLGKMED--------AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422

Query: 664 ASMLLEELRLFDNQVYGVAHGLLMG 688
           AS LL+E++    +   V + +L+G
Sbjct: 423 ASGLLDEMKEKGIEADVVTYNVLIG 447



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 160/342 (46%), Gaps = 40/342 (11%)

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           + N LL  +    ++DLA +       + +SP++ T++T+I G  + G+L  A ++  ++
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDI 217

Query: 396 KFLGIGLDRVSYNTVLSIYAK---LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           K  G+     +YN+++  Y K    G      ++ KEM  +GI   AVT+  L+ GY K 
Sbjct: 218 KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKN 277

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
                  R+FE+MK   ++ +++TY++LI      G  +E +++  E +  GL  + + +
Sbjct: 278 SNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITF 337

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG 572
             ++   CK G++  A   +D MT+  + P+VV Y  +ID +              R LG
Sbjct: 338 GCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGY--------------RRLG 383

Query: 573 KQKESANLDAMCSQD---DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI 629
           K +     DAM  ++    K +     T N +I  F      ++G  +  +         
Sbjct: 384 KME-----DAMAVKEAMAKKGISPNVTTYNCLITGF-----SRSGDWRSAS--------- 424

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            G+  +M +  I+ +VVT++ ++ A         A  LL+E+
Sbjct: 425 -GLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEM 465


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 191/361 (52%), Gaps = 15/361 (4%)

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CG 274
           F   L  GY   +  ++ LI          EA  +F  M++    P++VTY  +I   CG
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 275 KGGVD--FKHVVEIFDDMLRNGV--QPDRITFNSLLAVCSRGGLWEAARNLF-------- 322
            G ++   K   E+ +D+ R  +  +P+ IT+N ++    + G  + A+ LF        
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 323 --NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
             NEM+ +G+  D+ T+N L+D +CK  ++  A +++  M    I P++VTY+++I+G+ 
Sbjct: 247 IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 306

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
             G L+ A  +F  M   G   D +SYN +++ Y+K  + EEA+ +  EM   G R + +
Sbjct: 307 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 366

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY++LL G    GK D+ +++F  MKA  ++ N  TY   +D   K     EAM++F E 
Sbjct: 367 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 426

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           K +  K ++   + LID LCK G +E+A  L ++++ EG  PNVVTY  +I  F R    
Sbjct: 427 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 486

Query: 561 E 561
           +
Sbjct: 487 D 487



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 235/523 (44%), Gaps = 66/523 (12%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           ++ +F+ L+S   +  +  +  S++N M+   L  +  T N +++ C       +     
Sbjct: 68  SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN-CLCNVNRLREGFAA 126

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           F  +LR G  P+ +T+N+L+  +C    + EA R LF  M   G   D+ TY TL+  +C
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATR-LFLRMQKLGCTPDVVTYGTLIKGLC 185

Query: 346 KGAQMDLAFEIMAEMPAK------NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
               +++A ++  EM         N  PNV+TY+ ++DG  K GR D+A  +F EMK  G
Sbjct: 186 GTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQG 245

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
                                    ++  EM   G++ D VT+N L+    K+GK  E +
Sbjct: 246 -------------------------MIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAK 280

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++   M    + P+L+TY++LI+ +   G    A ++F      G + DV+ Y+ LI+  
Sbjct: 281 KLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGY 340

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
            K   VE A+ L +EM   G RPNV+TY+S++     +      VDD ++     K    
Sbjct: 341 SKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGK----VDDAKKLFSVMKAHGI 396

Query: 580 ----------LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI 629
                     LD +C  D   + EA       +K+F +L +       +   C  + LC 
Sbjct: 397 AENSYTYGIFLDGLCKNDC--LFEA-------MKLFTELKSSNFKLEIENLNCLIDGLCK 447

Query: 630 LG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA 682
            G       +F+K+     +PNVVT++ +++   R    + A++L++++         + 
Sbjct: 448 AGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIIT 507

Query: 683 HGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
           +  LM   Y  N   + + L   +   D S  +   + + DML
Sbjct: 508 YNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDML 550



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 187/377 (49%), Gaps = 21/377 (5%)

Query: 198 AMISILGRLGKVDLAKNIFETALNE------GYGNTVYAFSALISAYGRSGYCQEAISVF 251
            +I  L   G +++A  + +  LN+           V  ++ ++    + G   EA  +F
Sbjct: 179 TLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLF 238

Query: 252 NSMKRYN----------LKPNLVTYNAVIDACGKGG--VDFKHVVEIFDDMLRNGVQPDR 299
             MK             L+P++VT+N +ID   K G  ++ K ++ +   M+ +G+ PD 
Sbjct: 239 EEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGV---MIESGIVPDL 295

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           +T+NSL+      G   +AR LF  M  +G + D+ +YN L++   K  +++ A ++  E
Sbjct: 296 VTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNE 355

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M      PNV+TY +++ G   AG++DDA  +FS MK  GI  +  +Y   L    K   
Sbjct: 356 MLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDC 415

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
             EA+ +  E++SS  + +    N L+ G  K GK +    +FE++  +   PN++TY+ 
Sbjct: 416 LFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTI 475

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +I  + + G   +A  + ++ +  G   D++ Y+ L+    ++  +E  V LL  M ++ 
Sbjct: 476 MIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKD 535

Query: 540 IRPNVVTYNSIIDAFGR 556
           + P+ +T + ++D   +
Sbjct: 536 VSPDAITCSIVVDMLSK 552



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 174/341 (51%), Gaps = 13/341 (3%)

Query: 203 LGRLGKVDLAKNIFETA----------LNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           L ++G+ D AK +FE            L++G    +  F+ LI    + G   EA  +  
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLG 284

Query: 253 SMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
            M    + P+LVTYN++I+  C  G  D     E+F  M   G +PD I++N L+   S+
Sbjct: 285 VMIESGIVPDLVTYNSLIEGFCMVG--DLNSARELFVSMPSKGCEPDVISYNVLINGYSK 342

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
               E A  L+NEM+  G   ++ TY++LL  I    ++D A ++ + M A  I+ N  T
Sbjct: 343 TLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYT 402

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y   +DG  K   L +A+ +F+E+K     L+  + N ++    K G+ E A  + +++ 
Sbjct: 403 YGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLS 462

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           + G   + VTY  ++ G+ ++G+ D+   + ++M+A+  +P+++TY+TL+  + +    +
Sbjct: 463 NEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLE 522

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           E +Q+     Q  +  D +  S ++D L K+   +  + LL
Sbjct: 523 EVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 563



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 164/304 (53%), Gaps = 1/304 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L + GKV  AK +    +  G    +  +++LI  +   G    A  +F SM  
Sbjct: 264 NVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPS 323

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +P++++YN +I+   K  +  +  ++++++ML  G +P+ IT++SLL      G  +
Sbjct: 324 KGCEPDVISYNVLINGYSKT-LKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVD 382

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A+ LF+ M   GI ++ +TY   LD +CK   +  A ++  E+ + N    +   + +I
Sbjct: 383 DAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLI 442

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  KAG+L+ A  +F ++   G   + V+Y  ++  + + G+ ++A ++ ++ME++G  
Sbjct: 443 DGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCT 502

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +TYN L+ G+ +  K +EV ++  +M    VSP+ +T S ++D+ SK   Y+E + +
Sbjct: 503 PDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHL 562

Query: 497 FREF 500
              F
Sbjct: 563 LPRF 566



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 70/193 (36%), Gaps = 38/193 (19%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK------ 260
           GKVD AK +F      G     Y +   +    ++    EA+ +F  +K  N K      
Sbjct: 379 GKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENL 438

Query: 261 -----------------------------PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDM 290
                                        PN+VTY  +I   C +G VD  +V  +   M
Sbjct: 439 NCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANV--LIQKM 496

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
             NG  PD IT+N+L+         E    L + M  + +  D  T + ++D + K  + 
Sbjct: 497 EANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKY 556

Query: 351 DLAFEIMAEMPAK 363
                ++   P +
Sbjct: 557 QECLHLLPRFPIQ 569


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 238/493 (48%), Gaps = 42/493 (8%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           K  SA++  LG+    ++   + +   + G    VY F+  I   GR+G   EA  +F  
Sbjct: 228 KTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRR 287

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           M      P+LVTY  +IDA    G   ++  E+F  M  NG +PD++ + +LL   +  G
Sbjct: 288 MDDEGCGPDLVTYTVLIDALCNAG-QLENAKELFVKMKANGHKPDQVIYITLLDKFNDFG 346

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             +  +  +++M   G   D+ T+  L+D +CK    D AF     M  + I PN+ TY+
Sbjct: 347 DLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYN 406

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+I G  +AGR++DAL +   M+ +G+     +Y T +  + K G   +A+   ++M++ 
Sbjct: 407 TLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAK 466

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI  + V  NA L    + G+  E + MF  ++ + ++P+ +TY+ ++  YSK G   EA
Sbjct: 467 GIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEA 526

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           + +  E  + G + DV++ ++LID+L K G V+ A  + D M    + P VVTYN+++  
Sbjct: 527 VNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSG 586

Query: 554 FGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQIIKVFG 606
            G+    +  ++  E  + K K S N       LD  C  D+ ++          +K+F 
Sbjct: 587 LGKEGRVQKAIELFESMIXK-KCSPNTISFNTLLDCFCKNDEVELA---------LKMFS 636

Query: 607 QLVAEKAGQGKKENRCRQEIL----CILGVFQK---------MHKLK--IKPNVVTFSAI 651
           ++             C+ ++L     I G+ ++          H+LK  + P+ VT   +
Sbjct: 637 KMTVMD---------CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTL 687

Query: 652 LNACSRCNSFEDA 664
           L    +C    DA
Sbjct: 688 LPGLVKCGQIGDA 700



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 162/320 (50%), Gaps = 10/320 (3%)

Query: 247  AISVFNSM-KRYNLKPNLVTYNAVIDACGKGGVDFKHVVE----IFDDMLRNGVQPDRIT 301
            A  +F+   K+  + P L +YN +I     G +   H  E    +F DM   G  PD  T
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLI-----GELLEVHYTEKAWDLFKDMKNVGCAPDAFT 825

Query: 302  FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
            FN LLAV  + G       L+ EM+ R    D  TYN ++ ++ K   +D A +   ++ 
Sbjct: 826  FNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLV 885

Query: 362  AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            + +  P   TY  +IDG AK GRL++A+ +F EM   G   +   +N +++ Y K+G  E
Sbjct: 886  SSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTE 945

Query: 422  EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
             A  + K M + GIR D  +Y  L+      G+ DE    F ++K+  + P+ + Y+ +I
Sbjct: 946  TACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRII 1005

Query: 482  DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
            +   K    +EA+ ++ E +  G+  D+  Y++L+  L   G+VE A  + +E+   G+ 
Sbjct: 1006 NGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLE 1065

Query: 542  PNVVTYNSIIDAFGRSATTE 561
            P+V TYN++I  +  S   E
Sbjct: 1066 PDVFTYNALIRGYSLSENPE 1085



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/553 (24%), Positives = 236/553 (42%), Gaps = 85/553 (15%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR-- 256
           M+  L    KV+    +FE    +     +  +  +  A    G  ++  +V N M++  
Sbjct: 128 MLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAG 187

Query: 257 -------YN--------------------------LKPNLVTYNAVIDACGKGGVDFKHV 283
                  YN                          LKP+L TY+A++ A GK   D + V
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR-DSEMV 246

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           + +  +M   G++P+  TF   + V  R G  + A  +F  M   G   D+ TY  L+DA
Sbjct: 247 MVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDA 306

Query: 344 ICKGAQMDLAFEIM-----------------------------------AEMPAKNISPN 368
           +C   Q++ A E+                                    ++M A    P+
Sbjct: 307 LCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPD 366

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           VVT++ ++D   KA   D+A   F  M+  GI  +  +YNT++    + GR E+AL +  
Sbjct: 367 VVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLD 426

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            MES G++  A TY   +  +GK G+  +    FE+MKA  + PN++  +  +   ++ G
Sbjct: 427 TMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMG 486

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
             +EA  +F   ++ GL  D V Y+ ++    K G V+ AV+LL EM + G  P+V+  N
Sbjct: 487 RLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVN 546

Query: 549 SIIDAFGRSATTE--CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG 606
           S+ID+  ++   +    + D  +D+         + + S   K+    GR   + I++F 
Sbjct: 547 SLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKE----GRV-QKAIELFE 601

Query: 607 QLVAEKAGQGKKENRCRQEILC-------ILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
            ++ +K            +  C        L +F KM  +  KP+V+T++ ++    + N
Sbjct: 602 SMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKEN 661

Query: 660 SFEDASMLLEELR 672
               A     +L+
Sbjct: 662 KVNHAFWFFHQLK 674



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 125/524 (23%), Positives = 236/524 (45%), Gaps = 58/524 (11%)

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACG-KGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
           ++  +VF  M++  ++ +L TY  +  A   +GG+  + +  + + M + G   +  ++N
Sbjct: 139 EDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGL--RQMTTVLNKMRKAGFVLNAYSYN 196

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
            L+ +  + G    A  ++  MV  G+   + TY+ L+ A+ K    ++   ++ EM   
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
            + PNV T++  I    +AG++D+A  +F  M   G G D V+Y  ++      G+ E A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
             +  +M+++G + D V Y  LL  +   G  D  +  + QM+AD   P+++T++ L+DV
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K   + EA   F   ++ G+  ++  Y+ LI  L + G +E A+ LLD M   G++P 
Sbjct: 377 LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPT 436

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR------- 596
             TY + ID FG+S  T   V+  E+ +  +    N+ A C+     + E GR       
Sbjct: 437 AYTYITFIDYFGKSGETGKAVETFEK-MKAKGIVPNIVA-CNASLYSLAEMGRLREAKTM 494

Query: 597 --------------TDNQIIKVFGQLVAEKAGQGKK---------ENRCRQEILCI---- 629
                         T N ++K +      K GQ  +          N C  +++ +    
Sbjct: 495 FNGLRENGLAPDSVTYNMMMKCYS-----KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLI 549

Query: 630 ------------LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQ 677
                         +F +M  +K+ P VVT++ +L+   +    + A  L E +      
Sbjct: 550 DSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCS 609

Query: 678 VYGVAHGLLMG-YRDNIWVQ-ALSLFDEVKLMDSSTASAFYNAL 719
              ++   L+  +  N  V+ AL +F ++ +MD       YN +
Sbjct: 610 PNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTV 653



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 163/325 (50%), Gaps = 1/325 (0%)

Query: 223  GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
            G   T+ +++ LI       Y ++A  +F  MK     P+  T+N ++   GK G     
Sbjct: 783  GISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSG-KITE 841

Query: 283  VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            + E++ +M+    +PD IT+N +++  ++    + A + F ++V         TY  L+D
Sbjct: 842  LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID 901

Query: 343  AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
             + K  +++ A  +  EM      PN   ++ +I+GY K G  + A  +F  M   GI  
Sbjct: 902  GLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRP 961

Query: 403  DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
            D  SY  ++      GR +EAL    E++S+G+  D + YN ++ G GK  + +E   ++
Sbjct: 962  DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1021

Query: 463  EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
             +M+   + P+L TY++L+      G+ ++A +++ E + AGL+ DV  Y+ALI     +
Sbjct: 1022 NEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLS 1081

Query: 523  GLVESAVSLLDEMTKEGIRPNVVTY 547
               E A ++   M  +G  PN+ TY
Sbjct: 1082 ENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 156/304 (51%), Gaps = 1/304 (0%)

Query: 212  AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
            A ++F+   N G     + F+ L++ +G+SG   E   ++  M     KP+ +TYN VI 
Sbjct: 807  AWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVIS 866

Query: 272  ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            +  K   +    ++ F D++ +  +P   T+  L+   ++ G  E A  LF EM   G  
Sbjct: 867  SLAKSN-NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK 925

Query: 332  QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
             +   +N L++   K    + A ++   M  + I P++ +Y+ ++D    AGR+D+AL  
Sbjct: 926  PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY 985

Query: 392  FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
            F+E+K  G+  D ++YN +++   K  R EEAL +  EM + GI  D  TYN+L+   G 
Sbjct: 986  FNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGL 1045

Query: 452  QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
             G  ++ +RM+E+++   + P++ TY+ LI  YS     + A  +++     G   ++  
Sbjct: 1046 AGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGT 1105

Query: 512  YSAL 515
            Y+ L
Sbjct: 1106 YAQL 1109



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 125/556 (22%), Positives = 235/556 (42%), Gaps = 84/556 (15%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL-----ASAMISILGRLGKVDLAK 213
           Y   +   G  GE  KA++ F       E+   +G +      +A +  L  +G++  AK
Sbjct: 440 YITFIDYFGKSGETGKAVETF-------EKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
            +F      G       ++ ++  Y + G   EA+++ + M R   +P+++  N++ID+ 
Sbjct: 493 TMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSL 552

Query: 274 GKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
            K G VD     ++FD M    + P  +T+N+LL+   + G  + A  LF  M+ +    
Sbjct: 553 YKAGRVD--EAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSP 610

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           +  ++NTLLD  CK  +++LA ++ ++M   +  P+V+TY+T+I G  K  +++ A   F
Sbjct: 611 NTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFF 670

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE-MESSGIRKDAVTYNALLGGYGK 451
            ++K   +  D V+  T+L    K G+  +A+ + ++ M     R +   +  L+GG   
Sbjct: 671 HQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLV 729

Query: 452 QGKYDEVRRMFEQM------------------------------------KADCVSPNLL 475
           + + D+     E++                                    K   +SP L 
Sbjct: 730 EAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLA 789

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           +Y+ LI    +    ++A  +F++ K  G   D   ++ L+    K+G +     L  EM
Sbjct: 790 SYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEM 849

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
                +P+ +TYN +I +  +S            +L K      LD        D +   
Sbjct: 850 ISRRCKPDAITYNIVISSLAKS-----------NNLDKA-----LDFFYDLVSSDFRPTP 893

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
           RT       +G L+   A  G+ E   R        +F++M     KPN   F+ ++N  
Sbjct: 894 RT-------YGPLIDGLAKVGRLEEAMR--------LFEEMSDYGCKPNCAIFNILINGY 938

Query: 656 SRCNSFEDASMLLEEL 671
            +    E A  L + +
Sbjct: 939 GKIGDTETACQLFKRM 954



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 117/515 (22%), Positives = 216/515 (41%), Gaps = 70/515 (13%)

Query: 195  LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
            + +++I  L + G+VD A  +F+   +     TV  ++ L+S  G+ G  Q+AI +F SM
Sbjct: 544  VVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESM 603

Query: 255  KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
                  PN +++N ++D   K   + +  +++F  M     +PD +T+N+++    +   
Sbjct: 604  IXKKCSPNTISFNTLLDCFCKND-EVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK 662

Query: 315  WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE-MPAKNISPNVVTYS 373
               A   F+++  + +  D  T  TLL  + K  Q+  A  I  + M       N   + 
Sbjct: 663  VNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWE 721

Query: 374  TMIDGYAKAGRLDDALNMFSEM------------------------------------KF 397
             ++ G      +D A+    E+                                    K 
Sbjct: 722  DLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKK 781

Query: 398  LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            LGI     SYN ++    ++   E+A  + K+M++ G   DA T+N LL  +GK GK  E
Sbjct: 782  LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE 841

Query: 458  VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            +  ++++M +    P+ +TY+ +I   +K     +A+  F +   +  +     Y  LID
Sbjct: 842  LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID 901

Query: 518  ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
             L K G +E A+ L +EM+  G +PN   +N +I+ +G+   TE                
Sbjct: 902  GLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTE---------------- 945

Query: 578  ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
                  C    + V E  R D   +K +  LV      G+ +          L  F ++ 
Sbjct: 946  ----TACQLFKRMVNEGIRPD---LKSYTILVDCLCLAGRVDEA--------LYYFNELK 990

Query: 638  KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
               + P+ + ++ I+N   +    E+A  L  E+R
Sbjct: 991  STGLDPDFIAYNRIINGLGKSQRMEEALALYNEMR 1025



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 123/257 (47%), Gaps = 7/257 (2%)

Query: 142  LGDILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAM 199
            L ++ K+   + C  D   Y  ++  L       KA+  F   V  + R     +    +
Sbjct: 842  LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP--RTYGPL 899

Query: 200  ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
            I  L ++G+++ A  +FE   + G       F+ LI+ YG+ G  + A  +F  M    +
Sbjct: 900  IDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGI 959

Query: 260  KPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +P+L +Y  ++D  C  G VD    +  F+++   G+ PD I +N ++    +    E A
Sbjct: 960  RPDLKSYTILVDCLCLAGRVD--EALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEA 1017

Query: 319  RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
              L+NEM +RGI  D++TYN+L+  +     ++ A  +  E+    + P+V TY+ +I G
Sbjct: 1018 LALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077

Query: 379  YAKAGRLDDALNMFSEM 395
            Y+ +   + A  ++  M
Sbjct: 1078 YSLSENPEHAYTVYKNM 1094



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 11/221 (4%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISIL----GRLGKVDLAKN 214
            Y  L+  L   G   +A++ F      EE  +   K   A+ +IL    G++G  + A  
Sbjct: 896  YGPLIDGLAKVGRLEEAMRLF------EEMSDYGCKPNCAIFNILINGYGKIGDTETACQ 949

Query: 215  IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
            +F+  +NEG    + +++ L+     +G   EA+  FN +K   L P+ + YN +I+  G
Sbjct: 950  LFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLG 1009

Query: 275  KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
            K     +  + ++++M   G+ PD  T+NSL+      G+ E A+ ++ E+   G++ D+
Sbjct: 1010 KSQ-RMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDV 1068

Query: 335  FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            FTYN L+         + A+ +   M     +PN+ TY+ +
Sbjct: 1069 FTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109


>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
          Length = 661

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 220/487 (45%), Gaps = 68/487 (13%)

Query: 186 EERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           E R      L S +IS   R    D A  +  +A   G      A +ALIS+ G +    
Sbjct: 214 ESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVA 273

Query: 246 EAISVF-NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           EA ++F        +KP    YNA++    K G   K+  ++ D+M + GV PD  T++ 
Sbjct: 274 EAEALFLEFFLAGEIKPRTRAYNALLKGYVKIG-SLKNAEQVLDEMSQCGVAPDEATYSL 332

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L+   +R G WE+AR L  EM   G+    + ++ +L       +   AF ++ EM A  
Sbjct: 333 LVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASG 392

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           + P+   Y+ MID + K   L  A++ F  M+  GI  D V++NT++  + K GR + A+
Sbjct: 393 VRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAI 452

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +  EM  S       TYN ++   G++ +++ V  M  +MK   + PN++TY+TL+DVY
Sbjct: 453 ELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVY 512

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            + G +KEA+      K  GLK    +Y AL++A  + GL + A++++  M  +G+  + 
Sbjct: 513 GRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEAST 572

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
           V  NS+I+AFG                                          D +I + 
Sbjct: 573 VVLNSLINAFGE-----------------------------------------DRRIAEA 591

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           F  L      Q  KEN                    ++P+V+T++ ++ A  R   FE  
Sbjct: 592 FSVL------QFMKEN-------------------GLRPDVITYTTLMKALIRVEQFEKV 626

Query: 665 SMLLEEL 671
            ++ EE+
Sbjct: 627 PVIYEEM 633



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 172/339 (50%), Gaps = 1/339 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++G +  A+ + +     G       +S L+ AY R+G  + A  +   M+   +KP+  
Sbjct: 304 KIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSY 363

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
            ++ ++      G +++    +  +M  +GV+PDR  +N ++    +      A + F+ 
Sbjct: 364 VFSRILAGFRDRG-EWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDR 422

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   GI+ D+ T+NTL+DA CKG + D A E+  EM   N      TY+ MI+   +  R
Sbjct: 423 MREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQR 482

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
            +    M +EMK  G+  + ++Y T++ +Y + GRF+EA+   + M++ G++     Y+A
Sbjct: 483 WEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHA 542

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+  Y ++G  D    + + M+AD +  + +  ++LI+ + +     EA  + +  K+ G
Sbjct: 543 LVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENG 602

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           L+ DV+ Y+ L+ AL +    E    + +EM   G  P+
Sbjct: 603 LRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPD 641



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 168/323 (52%), Gaps = 5/323 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++    R G+ + A+ + +    +G   + Y FS +++ +   G  Q+A +V   M  
Sbjct: 331 SLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHA 390

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P+   YN +ID  GK      H ++ FD M   G++PD +T+N+L+    +GG  +
Sbjct: 391 SGVRPDRHFYNVMIDTFGKYNC-LGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHD 449

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF+EM          TYN +++ + +  + +    ++AEM  + + PN++TY+T++
Sbjct: 450 RAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLV 509

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y ++GR  +A++    MK  G+      Y+ +++ YA+ G  + AL V K M + G+ 
Sbjct: 510 DVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLE 569

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              V  N+L+  +G+  +  E   + + MK + + P+++TY+TL+    +   +++   I
Sbjct: 570 ASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVI 629

Query: 497 FREFKQAGL----KADVVLYSAL 515
           + E   +G     KA  +L SAL
Sbjct: 630 YEEMITSGCAPDRKARAMLRSAL 652



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 161/345 (46%), Gaps = 34/345 (9%)

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           ++ D   ++ L+ A  +    D A E++A   A  ++P     + +I     A R+ +A 
Sbjct: 217 LEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAE 276

Query: 390 NMFSEMKFLGIGLDRV-SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            +F E    G    R  +YN +L  Y K+G  + A  V  EM   G+  D  TY+ L+  
Sbjct: 277 ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDA 336

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           Y + G+++  R + ++M+AD V P+   +S ++  +   G +++A  + RE   +G++ D
Sbjct: 337 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPD 396

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
              Y+ +ID   K   +  A+   D M +EGI P+VVT+N++IDA  +            
Sbjct: 397 RHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKG----------- 445

Query: 569 RDLGKQKESANL-DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
              G+   +  L D M    + +      T N +I + G+   E+  +G           
Sbjct: 446 ---GRHDRAIELFDEM---RESNCPLGTTTYNIMINLLGE---EQRWEG----------- 485

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            +  +  +M +  + PN++T++ +++   R   F++A   +E ++
Sbjct: 486 -VEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMK 529



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 148/355 (41%), Gaps = 77/355 (21%)

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGI--RKDAVTYNALLGGYGKQGKYDEVRRMF-E 463
           ++ ++S +A+    + AL +    ++ G+  R +AVT  AL+   G   +  E   +F E
Sbjct: 224 FSDLISAFARARLPDAALELLASAQAIGLTPRSNAVT--ALISSLGSARRVAEAEALFLE 281

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
              A  + P    Y+ L+  Y K G  K A Q+  E  Q G+  D   YS L+DA  + G
Sbjct: 282 FFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAG 341

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK-QKESANLDA 582
             ESA  LL EM  +G++P+   ++ I+  F              RD G+ QK  A L  
Sbjct: 342 RWESARILLKEMEADGVKPSSYVFSRILAGF--------------RDRGEWQKAFAVLRE 387

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI---LGVFQKMHKL 639
           M +     V+      N +I  FG           K N       C+   +  F +M + 
Sbjct: 388 MHASG---VRPDRHFYNVMIDTFG-----------KYN-------CLGHAMDAFDRMREE 426

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALS 699
            I+P+VVT++ +++A   C                             G  D    +A+ 
Sbjct: 427 GIEPDVVTWNTLIDA--HCKG---------------------------GRHD----RAIE 453

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
           LFDE++  +    +  YN + ++L    +  G + ++ E K + +  N+ + + L
Sbjct: 454 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTL 508


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 192/359 (53%), Gaps = 3/359 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++ A  +    L  G   T    + LI+ Y + G  ++A+           +P+ +TY
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N  ++  C    V   H +++ D M++ G  PD  T+N ++    + G  E A+ + N+M
Sbjct: 290 NTFVNGLCQNDHV--GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V RG   DI T+NTL+ A+C G +++ A ++  ++  K +SP+V T++ +I+   K G  
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             AL +F EMK  G   D V+YNT++     LG+  +AL + K+MES+G  +  +TYN +
Sbjct: 408 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K+ + +E   +F+QM    +S N +T++TLID   K     +A  +  +    GL
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGL 527

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           + + + Y++++   CK G ++ A  +L+ MT  G   +VVTY ++I+   ++  T+  +
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 189/361 (52%), Gaps = 1/361 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +I+   +LG+V+ A    +  + +G+      ++  ++   ++ +   A+ V + M 
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           +    P++ TYN V++   K G   +    I + M+  G  PD  TFN+L+A    G   
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNG-QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A +L  ++  +G+  D++T+N L++A+CK     LA  +  EM     +P+ VTY+T+
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID     G+L  AL++  +M+  G     ++YNT++    K  R EEA  V  +M+  GI
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
            ++A+T+N L+ G  K  K D+   +  QM ++ + PN +TY++++  Y K G  K+A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I       G + DVV Y  LI+ LCK G  + A+ +L  M  +G+RP    YN ++ +  
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 556 R 556
           R
Sbjct: 613 R 613



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 179/347 (51%), Gaps = 1/347 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + +  + EG+   V+ ++ +++   ++G  +EA  + N M      P++ T+N +I 
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           A   G    +  +++   +   GV PD  TFN L+    + G    A  LF EM + G  
Sbjct: 365 ALCTGN-RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 423

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  TYNTL+D +C   ++  A +++ +M +     + +TY+T+IDG  K  R+++A  +
Sbjct: 424 PDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEV 483

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F +M   GI  + +++NT++    K  + ++A  +  +M S G++ + +TYN++L  Y K
Sbjct: 484 FDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCK 543

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           QG   +   + E M A+    +++TY TLI+   K G  + A+++ R  +  G++     
Sbjct: 544 QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKA 603

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           Y+ ++ +L +   +  A+SL  EM + G  P+ +TY  +     R  
Sbjct: 604 YNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG 650



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 188/358 (52%), Gaps = 4/358 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +++ L + G+++ AK I    ++ G    +  F+ LI+A       +EA+ +   +    
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
           + P++ T+N +I+A  K G D    + +F++M  +G  PD +T+N+L+  +CS G L +A
Sbjct: 387 VSPDVYTFNILINALCKVG-DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
             +L  +M   G  +   TYNT++D +CK  +++ A E+  +M  + IS N +T++T+ID
Sbjct: 446 L-DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K  ++DDA  + ++M   G+  + ++YN++L+ Y K G  ++A  + + M ++G   
Sbjct: 505 GLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D VTY  L+ G  K G+     ++   M+   + P    Y+ ++    +    ++A+ +F
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624

Query: 498 REFKQAGLKADVVLYSALIDALCK-NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           RE  + G   D + Y  +   LC+  G ++ A   + EM  +G  P   ++  + +  
Sbjct: 625 REMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 236/515 (45%), Gaps = 47/515 (9%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKR- 256
           +I  LG +G +DL K +      EG+   +    + + +Y       +A+  + N ++  
Sbjct: 80  IIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL 139

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           + ++ + V YN +++   +G    K +  ++ +M   G++PD +TFN+L+    R     
Sbjct: 140 FGIQADTVVYNHLLNVLVEGS-KMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +  EM  RG+  D  T+ TL+    +   ++ A  + A M     S   VT + +I
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY K GR++DAL    +    G   D+++YNT ++   +      AL V   M   G  
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  TYN ++    K G+ +E + +  QM      P++ T++TLI     G   +EA+ +
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            R+    G+  DV  ++ LI+ALCK G    A+ L +EM   G  P+ VTYN++ID    
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL-- 436

Query: 557 SATTECTVDDVER--DLGKQKESAN-----------LDAMCSQ----------DDKDVQE 593
                C++  + +  DL K  ES             +D +C +          D  D+Q 
Sbjct: 437 -----CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ- 490

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKIKPNVVTFSAIL 652
            G + N I   F  L+         +  C+ ++I    G+  +M    ++PN +T+++IL
Sbjct: 491 -GISRNAI--TFNTLI---------DGLCKDKKIDDAFGLINQMISEGLQPNNITYNSIL 538

Query: 653 NACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM 687
               +    + A+ +LE +     +V  V +G L+
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLI 573



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 154/318 (48%), Gaps = 8/318 (2%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           +DLA+ +      +G    VY F+ LI+A  + G    A+ +F  MK     P+ VTYN 
Sbjct: 376 LDLARQV----TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431

Query: 269 VID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           +ID  C  G       +++  DM   G     IT+N+++    +    E A  +F++M  
Sbjct: 432 LIDNLCSLG--KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 489

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           +GI ++  T+NTL+D +CK  ++D AF ++ +M ++ + PN +TY++++  Y K G +  
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKK 549

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A ++   M   G  +D V+Y T+++   K GR + AL V + M   G+R     YN +L 
Sbjct: 550 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 609

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK-GGLYKEAMQIFREFKQAGLK 506
              ++    +   +F +M      P+ LTY  +     + GG  KEA     E    G  
Sbjct: 610 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669

Query: 507 ADVVLYSALIDALCKNGL 524
            +   +  L + L   G+
Sbjct: 670 PEFSSFRMLAEGLLNLGM 687



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 167/406 (41%), Gaps = 53/406 (13%)

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE- 394
            Y  ++  +     +DL   ++AEM  +     +    + +D Y      DDA+++    
Sbjct: 76  VYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQ 135

Query: 395 -MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
                GI  D V YN +L++  +  + +    V  EM + GI+ D VT+N L+    +  
Sbjct: 136 LQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAH 195

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           +      M E+M +  V+P+  T++TL+  + + G  + A+++     + G  A  V  +
Sbjct: 196 QVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVN 255

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            LI+  CK G VE A+  + +   +G  P+ +TYN+ ++         C  D V   L  
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL-------CQNDHVGHAL-- 306

Query: 574 QKESANLDAMCSQD-DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
                 +D M  +  D DV       N + K  GQL   K                  G+
Sbjct: 307 ----KVMDVMVQEGHDPDVFTYNIVVNCLCK-NGQLEEAK------------------GI 343

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDN 692
             +M      P++ TF+ ++ A    N  E+A  L  ++      V GV+  +   Y  N
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV-----TVKGVSPDV---YTFN 395

Query: 693 IWVQALS----------LFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           I + AL           LF+E+K    +     YN L D L   G+
Sbjct: 396 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 190/366 (51%), Gaps = 1/366 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           AS ++    + G++D A+ + +     G       ++ L+  Y R         V   M+
Sbjct: 136 ASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEME 195

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              ++P + TY  ++D     G D   V  +FD++ R  V  D   +++++    R G  
Sbjct: 196 SGGVEPTVGTYTILVDGLSTAG-DISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNV 254

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  +F+E V  GI+ +  TY  L++  CK  Q++ A  ++ +M  + +  N + ++TM
Sbjct: 255 RRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTM 314

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDGY + G +D AL + + M+ +GI LD  +YNT+     ++ R E+A  +   M  +G+
Sbjct: 315 IDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGV 374

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + V+Y  L+  + K+G   E RR+F  M+     P+++TY+ +ID Y K G  +EA +
Sbjct: 375 ESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAER 434

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
             +E ++ GL  DV  Y+AL+   C NG V+ A+ L +EM + G +PNVV Y ++I    
Sbjct: 435 FKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLA 494

Query: 556 RSATTE 561
           +   +E
Sbjct: 495 KEGRSE 500



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 178/332 (53%), Gaps = 1/332 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G   TV  ++ L+     +G   +  SVF+ +KR N+  ++  Y+AVI+A  + G + + 
Sbjct: 198 GVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAG-NVRR 256

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             E+FD+ + NG++P+  T+ +L+    + G  EAA  L  +M  RG+  +   +NT++D
Sbjct: 257 ASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMID 316

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
             C+   +D A EI A M    I  +V TY+T+  G  +  R++DA  +   M   G+  
Sbjct: 317 GYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVES 376

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           + VSY T++SI++K G   EA  + ++ME  G R   VTYN ++ GY K G   E  R  
Sbjct: 377 NYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFK 436

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           ++M+   + P++ TY+ L+  +   G    A+++F E KQ G K +VV Y+ALI  L K 
Sbjct: 437 KEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKE 496

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           G  E A    D M   G+ P+   Y+ ++ + 
Sbjct: 497 GRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 169/322 (52%), Gaps = 3/322 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++  L   G +   +++F+    +     VY +SA+I+AY R+G  + A  VF+      
Sbjct: 209 LVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNG 268

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           ++PN  TY A+I+  C  G ++   +  +  DM   GV  ++I FN+++    R G+ + 
Sbjct: 269 IEPNERTYGALINGFCKIGQIEAAEM--LLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDK 326

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +   M   GI  D++TYNTL   +C+  +M+ A +++  M    +  N V+Y+T+I 
Sbjct: 327 ALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLIS 386

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            ++K G + +A  +F +M+  G     V+YN ++  Y K G   EA    KEME  G+  
Sbjct: 387 IHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVP 446

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  TY AL+ G+   GK D   R+FE+MK     PN++ Y+ LI   +K G  +EA Q +
Sbjct: 447 DVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFY 506

Query: 498 REFKQAGLKADVVLYSALIDAL 519
                AGL  D  LYS L+ +L
Sbjct: 507 DNMLAAGLTPDDTLYSMLVGSL 528



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 177/386 (45%), Gaps = 38/386 (9%)

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           + G  + AR L +EM   G+  +   YN LLD   +        E++ EM +  + P V 
Sbjct: 145 KAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVG 204

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TY+ ++DG + AG +    ++F E+K   +  D   Y+ V++ Y + G    A  V  E 
Sbjct: 205 TYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDEC 264

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
             +GI  +  TY AL+ G+ K G+ +    +   M+   V  N + ++T+ID Y + G+ 
Sbjct: 265 VGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMV 324

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            +A++I    ++ G++ DV  Y+ L   LC+   +E A  LL  MT+ G+  N V+Y ++
Sbjct: 325 DKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTL 384

Query: 551 IDAFGRSATTECTVDDVE-----RDL---GKQKESANLDAMCSQDDKD--VQEAGRTDNQ 600
           I    +        D VE     RD+   G +      + M     K   ++EA R   +
Sbjct: 385 ISIHSKEG------DMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKE 438

Query: 601 IIK--------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
           + K         +  LV      GK +   R        +F++M +   KPNVV ++A++
Sbjct: 439 MEKKGLVPDVYTYAALVHGHCVNGKVDVALR--------LFEEMKQRGAKPNVVAYTALI 490

Query: 653 NACSRCNSFEDASMLLEELRLFDNQV 678
           +  ++    E+A       + +DN +
Sbjct: 491 SGLAKEGRSEEA------FQFYDNML 510



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 143/286 (50%), Gaps = 15/286 (5%)

Query: 177 QCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALIS 236
           +C    ++  ER         A+I+   ++G+++ A+ +       G G+    F+ +I 
Sbjct: 263 ECVGNGIEPNERTY------GALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMID 316

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV----DFKHVVEIFDDMLR 292
            Y R G   +A+ +   M+R  ++ ++ TYN +  ACG   V    D K ++ I   M  
Sbjct: 317 GYCRHGMVDKALEIKAVMERMGIQLDVYTYNTL--ACGLCRVNRMEDAKKLLHI---MTE 371

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
           NGV+ + +++ +L+++ S+ G    AR LF +M  +G    + TYN ++D   K   +  
Sbjct: 372 NGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIRE 431

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A     EM  K + P+V TY+ ++ G+   G++D AL +F EMK  G   + V+Y  ++S
Sbjct: 432 AERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALIS 491

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
             AK GR EEA      M ++G+  D   Y+ L+G      + DE+
Sbjct: 492 GLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKDEI 537



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 161/353 (45%), Gaps = 35/353 (9%)

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           +S + V+  + K GR ++A  +  EM   G++ +A  YN LL  Y +Q     V  + ++
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M++  V P + TY+ L+D  S  G   +   +F E K+  +  DV  YSA+I+A C+ G 
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           V  A  + DE    GI PN  TY ++I+ F       C +         Q E+A +    
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGF-------CKIG--------QIEAAEMLL-- 296

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL-CILGVFQKMHKLKIKP 643
                D+Q  G   NQII  F  ++         +  CR  ++   L +   M ++ I+ 
Sbjct: 297 ----TDMQLRGVGHNQII--FNTMI---------DGYCRHGMVDKALEIKAVMERMGIQL 341

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLF 701
           +V T++ +     R N  EDA  LL  +     +   V++  L+    ++   V+A  LF
Sbjct: 342 DVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLF 401

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
            +++   S  +   YN + D     G  R A+    E +++ +  +V++ + L
Sbjct: 402 RDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAAL 454


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 204/379 (53%), Gaps = 5/379 (1%)

Query: 183 VKREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           V R  ++  Q  L +   +++ L + G  DLA N+            V  F+ +I +  +
Sbjct: 175 VDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 234

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDR 299
             +  +A+++F  M+   ++PN+VTY+++I   C  G   +    ++  DM+   + P+ 
Sbjct: 235 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG--RWSDASQLLSDMIEKKINPNL 292

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           +TFN+L+    + G +  A  L+++M+ R ID DIFTYN+L++  C   ++D A ++   
Sbjct: 293 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 352

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M +K+  P+VVTY+T+I G+ K+ R++D   +F EM   G+  D V+Y T++      G 
Sbjct: 353 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 412

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            + A  V K+M S G+  D +TY+ LL G    GK ++   +F+ M+   +  ++  Y+T
Sbjct: 413 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 472

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +I+   K G   +   +F      G+K +VV Y+ +I  LC   L++ A +LL +M ++G
Sbjct: 473 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 532

Query: 540 IRPNVVTYNSIIDAFGRSA 558
             PN  TYN++I A  R  
Sbjct: 533 PLPNSGTYNTLIRAHLRDG 551



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 194/346 (56%), Gaps = 7/346 (2%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + +  +  G    +  +  +++   + G    A+++ N M+   ++ ++V +N +ID
Sbjct: 171 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 230

Query: 272 ACGKGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           +  K    ++HV   + +F +M   G++P+ +T++SL++     G W  A  L ++M+ +
Sbjct: 231 SLCK----YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 286

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            I+ ++ T+N L+DA  K  +   A ++  +M  ++I P++ TY+++++G+    RLD A
Sbjct: 287 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 346

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             MF  M       D V+YNT++  + K  R E+   + +EM   G+  D VTY  L+ G
Sbjct: 347 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 406

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
               G  D  +++F+QM +D V P+++TYS L+D     G  ++A+++F   +++ +K D
Sbjct: 407 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 466

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + +Y+ +I+ +CK G V+    L   ++ +G++PNVVTYN++I   
Sbjct: 467 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 512



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 234/480 (48%), Gaps = 44/480 (9%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+   R  ++ LA  +    +  GY  ++   S+L++ Y       +A+++ + M    
Sbjct: 88  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147

Query: 259 LKPNLVTYNAVIDACGKGGVDFKH-----VVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
            +P+ +T+  +I         F H      V + D M++ G QP+ +T+  ++  +C RG
Sbjct: 148 YRPDTITFTTLIHGL------FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 201

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              + A NL N+M    I+ D+  +NT++D++CK   +D A  +  EM  K I PNVVTY
Sbjct: 202 D-TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 260

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           S++I      GR  DA  + S+M    I  + V++N ++  + K G+F EA  +  +M  
Sbjct: 261 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 320

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             I  D  TYN+L+ G+    + D+ ++MFE M +    P+++TY+TLI  + K    ++
Sbjct: 321 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 380

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
             ++FRE    GL  D V Y+ LI  L  +G  ++A  +  +M  +G+ P+++TY+ ++D
Sbjct: 381 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 440

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
               +   E  ++  +     QK    LD                    I ++  ++   
Sbjct: 441 GLCNNGKLEKALEVFDY---MQKSEIKLD--------------------IYIYTTMIEGM 477

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              GK ++    ++ C L +        +KPNVVT++ +++        ++A  LL++++
Sbjct: 478 CKAGKVDD--GWDLFCSLSL------KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 529



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 174/339 (51%), Gaps = 1/339 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L +   VD A N+F+    +G    V  +S+LIS     G   +A  + + M  
Sbjct: 226 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 285

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PNLVT+NA+IDA  K G  F    +++DDM++  + PD  T+NSL+         +
Sbjct: 286 KKINPNLVTFNALIDAFVKEG-KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 344

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A+ +F  MV +    D+ TYNTL+   CK  +++   E+  EM  + +  + VTY+T+I
Sbjct: 345 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 404

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G    G  D+A  +F +M   G+  D ++Y+ +L      G+ E+AL V   M+ S I+
Sbjct: 405 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 464

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D   Y  ++ G  K GK D+   +F  +    V PN++TY+T+I       L +EA  +
Sbjct: 465 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 524

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
            ++ K+ G   +   Y+ LI A  ++G   ++  L+ EM
Sbjct: 525 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 563



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 188/394 (47%), Gaps = 43/394 (10%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           + +F  M+++   P  + FN LL+  ++   ++   +L  +M    I   ++TYN L++ 
Sbjct: 32  IGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINC 91

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C+ +Q+ LA  ++ +M      P++VT S++++GY    R+ DA+ +  +M  +G   D
Sbjct: 92  FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 151

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            +++ T++       +  EA+ +   M   G + + VTY  ++ G  K+G  D    +  
Sbjct: 152 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLN 211

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M+A  +  +++ ++T+ID   K     +A+ +F+E +  G++ +VV YS+LI  LC  G
Sbjct: 212 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 271

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDD-VERDLGKQKESAN 579
               A  LL +M ++ I PN+VT+N++IDAF   G+    E   DD ++R +     + N
Sbjct: 272 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 331

Query: 580 --LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
             ++  C  D  D                     KA Q                +F+ M 
Sbjct: 332 SLVNGFCMHDRLD---------------------KAKQ----------------MFEFMV 354

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                P+VVT++ ++    +    ED + L  E+
Sbjct: 355 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 388



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 155/309 (50%), Gaps = 1/309 (0%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +AI +F  M +    P++V +N ++ A  K    F  V+ + + M R  +     T+N L
Sbjct: 30  DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMK-KFDVVISLGEKMQRLEIVHGLYTYNIL 88

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    R      A  L  +M+  G +  I T ++LL+  C G ++  A  ++ +M     
Sbjct: 89  INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 148

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            P+ +T++T+I G     +  +A+ +   M   G   + V+Y  V++   K G  + AL 
Sbjct: 149 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 208

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           +  +ME++ I  D V +N ++    K    D+   +F++M+   + PN++TYS+LI    
Sbjct: 209 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 268

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
             G + +A Q+  +  +  +  ++V ++ALIDA  K G    A  L D+M K  I P++ 
Sbjct: 269 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 328

Query: 546 TYNSIIDAF 554
           TYNS+++ F
Sbjct: 329 TYNSLVNGF 337



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 146/323 (45%), Gaps = 31/323 (9%)

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++D A  +   M      P++V ++ ++   AK  + D  +++  +M+ L I     +YN
Sbjct: 27  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +++ + +  +   AL +  +M   G     VT ++LL GY    +  +   + +QM   
Sbjct: 87  ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
              P+ +T++TLI          EA+ +     Q G + ++V Y  +++ LCK G  + A
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           ++LL++M    I  +VV +N+IID+        C    V+  L   KE            
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSL-------CKYRHVDDALNLFKE------------ 247

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
             ++  G   N +   +  L++     G+  +  +        +   M + KI PN+VTF
Sbjct: 248 --METKGIRPNVV--TYSSLISCLCSYGRWSDASQ--------LLSDMIEKKINPNLVTF 295

Query: 649 SAILNACSRCNSFEDASMLLEEL 671
           +A+++A  +   F +A  L +++
Sbjct: 296 NALIDAFVKEGKFVEAEKLYDDM 318



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 2/114 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ LL  L N G+  KA++ F +  K E + +    + + MI  + + GKVD   ++F +
Sbjct: 435 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY--IYTTMIEGMCKAGKVDDGWDLFCS 492

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
              +G    V  ++ +IS        QEA ++   MK     PN  TYN +I A
Sbjct: 493 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 546


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 145/548 (26%), Positives = 253/548 (46%), Gaps = 54/548 (9%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            MI  LGR  ++D+ + I +    +G       F  +I+ Y R G  ++A+ +F  +  +
Sbjct: 79  VMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEF 138

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             KP +  YN ++DA       F+ +  ++ +M ++G+ P+  T+N LL    +    +A
Sbjct: 139 GCKPTVRIYNHLLDALLSEN-KFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDA 197

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  LF EM ++G   D  TY T++ ++CK  ++D A E+     A    P+V  Y+ +ID
Sbjct: 198 AHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNALID 252

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K GR++ A+ +  EM   G+  + VSY+ +++     G  E A  +  +M   G   
Sbjct: 253 GMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDA 312

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +  T+  L+ G   +GK  E   +++ M  D   PN++ Y+TLI      G  +EA+Q+ 
Sbjct: 313 NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVC 372

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            + +++G   +V  YS LID   K+G +  A    + M   G RPNVVTY  ++D   ++
Sbjct: 373 DQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKN 432

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
           +  +     VE+                     +   G T N I   F   +    G G+
Sbjct: 433 SMFDQANSLVEK---------------------MTLEGCTPNTI--TFNTFIKGLCGNGR 469

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE------- 670
            E          + + ++M      PN+ T++ +L+A  R N +E+A  L +E       
Sbjct: 470 VE--------WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQ 521

Query: 671 --LRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
             L  ++  +YG +   +MG       +AL LF +  +  ++  S  YN +       G+
Sbjct: 522 PNLVTYNTVLYGFSRAGMMG-------EALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574

Query: 729 -KRGAQLV 735
            K  AQLV
Sbjct: 575 VKIAAQLV 582



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 186/360 (51%), Gaps = 4/360 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+ L   G V+LA  +F      G    ++ F+ LI      G   EA+ ++  M +
Sbjct: 283 SCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQ 342

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              +PN+V YN +I   C  G ++    +++ D M R+G  P+  T++ L+   ++ G  
Sbjct: 343 DGCEPNVVAYNTLIHGLCSNGSLE--EALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDL 400

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A   +N M+  G   ++ TY  ++D +CK +  D A  ++ +M  +  +PN +T++T 
Sbjct: 401 VGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTF 460

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G    GR++ A+ +   M+  G   +  +YN +L    ++ ++EEA  + +E+E+  +
Sbjct: 461 IKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNL 520

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + VTYN +L G+ + G   E  ++F +      +P+ +TY+T+I  Y K G  K A Q
Sbjct: 521 QPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQ 580

Query: 496 IF-REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +  R         D++ Y++LI   C    +E A++ LD+   +GI PN  T+N+++  F
Sbjct: 581 LVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 190/375 (50%), Gaps = 10/375 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + M+S L + GK+D A+      L   +  +V  ++ALI    + G  + AI +   M  
Sbjct: 218 TTMVSSLCKAGKIDDARE-----LAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMD 272

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC-SRGGL 314
             + PN+V+Y+ +I++ C  G V+      +F  M   G   +  TF  L+  C  RG L
Sbjct: 273 NGVDPNVVSYSCIINSLCVSGNVELAFA--LFAQMFLRGCDANIHTFTPLIKGCFMRGKL 330

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           +EA  +L+  M+  G + ++  YNTL+  +C    ++ A ++  +M      PNV TYS 
Sbjct: 331 YEAL-DLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSI 389

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDG+AK+G L  A   ++ M   G   + V+Y  ++ +  K   F++A  + ++M   G
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG 449

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              + +T+N  + G    G+ +   ++ E+M+     PN+ TY+ L+D   +   Y+EA 
Sbjct: 450 CTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF 509

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +F+E +   L+ ++V Y+ ++    + G++  A+ L  +    G  P+ +TYN++I A+
Sbjct: 510 GLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAY 569

Query: 555 GRSATTECTVDDVER 569
            +    +     VER
Sbjct: 570 CKQGKVKIAAQLVER 584



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 190/357 (53%), Gaps = 4/357 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I  + + G++++A  +    ++ G    V ++S +I++   SG  + A ++F  M  
Sbjct: 248 NALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFL 307

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
                N+ T+  +I  C   G      ++++  M+++G +P+ + +N+L+  +CS G L 
Sbjct: 308 RGCDANIHTFTPLIKGCFMRG-KLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLE 366

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA + + ++M   G   ++ TY+ L+D   K   +  A E    M +    PNVVTY+ M
Sbjct: 367 EALQ-VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCM 425

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +D   K    D A ++  +M   G   + +++NT +      GR E A+ + + M+  G 
Sbjct: 426 VDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGC 485

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +  TYN LL    +  KY+E   +F++++A  + PNL+TY+T++  +S+ G+  EA+Q
Sbjct: 486 LPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQ 545

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK-EGIRPNVVTYNSII 551
           +F +    G   D + Y+ +I A CK G V+ A  L++ ++  +   P+++TY S+I
Sbjct: 546 LFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 602



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 5/226 (2%)

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TY  +++ + +  +MD+   I+ +M    I+     +  +I+GY + G  + AL MF  +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G       YN +L       +F+    +   M+  G+  +  TYN LL    K  + 
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D   ++F +M      P+ +TY+T++    K G   +A ++   FK +     V +Y+AL
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPS-----VPVYNAL 250

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           ID +CK G +E A+ LL EM   G+ PNVV+Y+ II++   S   E
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVE 296



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 147/354 (41%), Gaps = 27/354 (7%)

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           S+  +  A TY  ++   G++ + D V+ + +QMK D ++     +  +I+ Y + G  +
Sbjct: 67  SNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAE 126

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +A+++F    + G K  V +Y+ L+DAL      +    L   M K+G+ PNV TYN ++
Sbjct: 127 QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILL 186

Query: 552 DAFGRSATTECTVDDVER------DLGKQKESANLDAMCSQDDK-----DVQEAGRTDNQ 600
            A  ++      VD   +      + G   ++     M S   K     D +E       
Sbjct: 187 KALCKND----RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP 242

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
            + V+  L+     +G+ E   +     +LG   +M    + PNVV++S I+N+     +
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIK-----LLG---EMMDNGVDPNVVSYSCIINSLCVSGN 294

Query: 661 FEDASMLLEE--LRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAF-YN 717
            E A  L  +  LR  D  ++     +   +      +AL L+ ++ + D    +   YN
Sbjct: 295 VELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW-KLMIQDGCEPNVVAYN 353

Query: 718 ALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAW 771
            L   L   G    A  V  + +R     NV + S L      SG        W
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407


>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 819

 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 138/526 (26%), Positives = 239/526 (45%), Gaps = 56/526 (10%)

Query: 49  SLTKPPLSPSPRNAPKPAATSTTVAPNPKPFHSLSPLPSSKSELAPDFS-GRRSTRFVSK 107
           S T PP  P+ +N   P      +   P       P    +  ++ D+  GRR+ R    
Sbjct: 3   STTPPP--PASQNPEAPPGVVRLLRRRPPRSTGPPPWAKRRPSVSVDYDRGRRTVRVEVD 60

Query: 108 MHFGRPKIAMSTRHSVVAE-----------EALHHVTAFARDDVSLGDILKKFEFKLCGA 156
              G    A+  RH +  E           +    V A  R D    D +          
Sbjct: 61  ---GLGGDALPARHRLRVEGSRWQRDWKVSQVAARVLALPRADPHAVDAVLNCWAGRFAR 117

Query: 157 DDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF 216
            ++  L+RE+   G    A+  F + +K +E    +  +   MI +  R  +VD A+ + 
Sbjct: 118 RNFPLLIREMAFSGSLEHAVYVFCW-MKNQENYCARNDIYGMMIQLHARHNQVDQARGL- 175

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
                                             F  M+ +  KP+   YN++I+A  + 
Sbjct: 176 ----------------------------------FFEMQEWRCKPDADIYNSLINAHARA 201

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G+ ++  + I DDMLR  + P R T+N+++  C   G W+ A  L  +M+  G+  D+ T
Sbjct: 202 GL-WRWAINIMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVT 260

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM- 395
           +N +L A   G Q   A      M   NI+P+  T + +I    K G+  DA+++ + M 
Sbjct: 261 HNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMR 320

Query: 396 -KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
            K +    D V+Y +++  Y   G+ E    V   M + G++ + V+YNALLG Y   G 
Sbjct: 321 EKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGM 380

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
           + E   +F+ +K + + P++++Y+TL++ Y +    ++A ++F E ++   K + V Y+A
Sbjct: 381 HTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNA 440

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           LIDA    G+ + A+SLL EM K+GI P+VV+ ++++ A GR   T
Sbjct: 441 LIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQT 486



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 230/480 (47%), Gaps = 27/480 (5%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V+  K +F+  + EG    + +++AL+ AY   G   EA  +F  +K+  L+P++V+Y
Sbjct: 344 GQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSY 403

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
             +++A G+     K   E+F++M +N  +P+++++N+L+      G+++ A +L +EM 
Sbjct: 404 TTLLNAYGRSAQPEK-AREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEME 462

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             GI  D+ + +TLL A  +  Q      ++     + I  N+V Y++ I  Y   G  +
Sbjct: 463 KDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYE 522

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            AL +++ M    +  D V+YN ++S   KLG++ E+L   ++M    I      Y++L+
Sbjct: 523 KALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLI 582

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
             Y KQ K  E    F  MKA    P++LTY+ +I  Y+  G +     +F+E +   + 
Sbjct: 583 CSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAIL 642

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            D ++ S+L++AL K       + L+  M  + I+ N   Y  II +       +   + 
Sbjct: 643 PDAIICSSLMEALNKGNQYGRVLQLMKFMHDQCIQLNQKAYFEIIASCSMLRDWKTASEI 702

Query: 567 VER--------DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
           +E          +GK     N    C          G+T++ ++K+F ++V+  +  G  
Sbjct: 703 IEHLDSSLPSISVGKLNYLLNFLGKC----------GKTES-MMKLFYKMVSSCSTVGLS 751

Query: 619 ENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             +     L  +G       V Q M    ++P +  +  +L    R NS +  +++ +++
Sbjct: 752 TYKVLLRNLLAVGKWRKYVEVLQWMEDAGVRPTLYMYQNVLPYIWRDNSMDYVTLMQQKI 811



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 198/440 (45%), Gaps = 50/440 (11%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           Y  ++   G  G W KA++      K+  R      L +   ++S      +   A   F
Sbjct: 226 YNNVVNACGAAGNWKKALEL----CKKMIRNGVGPDLVTHNIVLSAFKNGFQYTKATGYF 281

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM--KRYNLKPNLVTYNAVIDA-- 272
           E           +  + +I    + G   +A+ + NSM  KR    P++VTY ++I +  
Sbjct: 282 EMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYY 341

Query: 273 -CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            CG+     ++   +FD M+  GV+P+ +++N+LL   +  G+   A  +F  +   G+ 
Sbjct: 342 VCGQ----VENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLR 397

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D+ +Y TLL+A  + AQ + A E+  EM   +  PN V+Y+ +ID Y  AG   +A+++
Sbjct: 398 PDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISL 457

Query: 392 FSEM-----------------------------------KFLGIGLDRVSYNTVLSIYAK 416
             EM                                   KF GI L+ V+YN+ +  Y  
Sbjct: 458 LHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLS 517

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
            G +E+AL +   M +S +  DAVTYN L+ G  K GKY E  + FE M    +      
Sbjct: 518 FGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEV 577

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           YS+LI  Y K     EA   F   K +G   DV+ Y+A+I A   +G   S   L  EM 
Sbjct: 578 YSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEME 637

Query: 537 KEGIRPNVVTYNSIIDAFGR 556
              I P+ +  +S+++A  +
Sbjct: 638 GNAILPDAIICSSLMEALNK 657



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 195/433 (45%), Gaps = 39/433 (9%)

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           +  ++ + +R    + AR LF EM       D   YN+L++A  +      A  IM +M 
Sbjct: 156 YGMMIQLHARHNQVDQARGLFFEMQEWRCKPDADIYNSLINAHARAGLWRWAINIMDDML 215

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
              I P+  TY+ +++    AG    AL +  +M   G+G D V++N VLS +    ++ 
Sbjct: 216 RAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYT 275

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV--SPNLLTYST 479
           +A    + M+ + I  D  T N ++    K G++ +   +   M+   V  SP+++TY++
Sbjct: 276 KATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTS 335

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +I  Y   G  +    +F      G+K ++V Y+AL+ A   +G+   A  +   + + G
Sbjct: 336 IIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNG 395

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           +RP+VV+Y ++++A+GRSA  E           K +E  N            +    + N
Sbjct: 396 LRPDVVSYTTLLNAYGRSAQPE-----------KAREVFN-----EMRKNSCKPNKVSYN 439

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
            +I  +G      AG  K+           + +  +M K  I P+VV+ S +L AC RC 
Sbjct: 440 ALIDAYGS-----AGMFKEA----------ISLLHEMEKDGIPPDVVSISTLLAACGRCR 484

Query: 660 SFEDASMLLEELRLFDNQVYGVAH----GLLMGYRDNIWVQALSLFDEVKLMDSSTASAF 715
                  +LE  +    ++  VA+    G  + + D  + +AL L+  +   + +  +  
Sbjct: 485 QTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGD--YEKALKLYATMMASNVNPDAVT 542

Query: 716 YNALTDMLWHFGQ 728
           YN L   L   G+
Sbjct: 543 YNILISGLCKLGK 555



 Score = 45.8 bits (107), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 47/256 (18%), Positives = 108/256 (42%), Gaps = 3/256 (1%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
           A  Y  L+  L   G+++++++ F   V  + R     ++ S++I    +  K+  A++ 
Sbjct: 540 AVTYNILISGLCKLGKYAESLKFFEDMV--DLRIPLTKEVYSSLICSYVKQDKLAEAEST 597

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
           F      G    V  ++A+I AY   G       +F  M+   + P+ +  +++++A  K
Sbjct: 598 FINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAILPDAIICSSLMEALNK 657

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G   +  V+++   M    +Q ++  +  ++A CS    W+ A  +   +        + 
Sbjct: 658 GN-QYGRVLQLMKFMHDQCIQLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLPSISVG 716

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
             N LL+ + K  + +   ++  +M +   +  + TY  ++      G+    + +   M
Sbjct: 717 KLNYLLNFLGKCGKTESMMKLFYKMVSSCSTVGLSTYKVLLRNLLAVGKWRKYVEVLQWM 776

Query: 396 KFLGIGLDRVSYNTVL 411
           +  G+      Y  VL
Sbjct: 777 EDAGVRPTLYMYQNVL 792


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 233/487 (47%), Gaps = 48/487 (9%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           K  SA++   G+   +     + E   + G    +Y ++  I   GR G   EA  +   
Sbjct: 230 KTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKR 289

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M      P++VTY  +IDA C    +D    + +F  M  +  +PD++T+ +LL   S  
Sbjct: 290 MDDDGCGPDVVTYTVLIDALCTARKLD--DAMCLFTKMKSSSHKPDKVTYVTLLDKFSDC 347

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  +    ++ EM   G   D+ T+  L++A+CK  +++ AF+++  M  + + PN+ TY
Sbjct: 348 GHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTY 407

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T+I G  +A RLDDAL++FS M+ LG+     +Y  ++  + K G   +AL   ++M++
Sbjct: 408 NTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKA 467

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            GI  + V  NA L    + G+  E + MF ++K+  ++P+ +TY+ ++  YSK G   E
Sbjct: 468 RGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDE 527

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A+++  E  +   + DV++ ++LID L K G VE A  +   M +  + P VVTYN ++ 
Sbjct: 528 AIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLA 587

Query: 553 AFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQIIKVF 605
             G+    +  V   E  +     S N       LD +C  D+ D+              
Sbjct: 588 GLGKEGQIQKAVQLFE-SMNGHGCSPNTITFNTLLDCLCKNDEVDLA------------- 633

Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
                                   L +F KM  +  +P+V+TF+ I++   + N  ++A 
Sbjct: 634 ------------------------LKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAI 669

Query: 666 MLLEELR 672
            L  +++
Sbjct: 670 WLFHQMK 676



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 150/593 (25%), Positives = 249/593 (41%), Gaps = 86/593 (14%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
            Y  L+   G  G   KA++ F     R    N      +A +  L  +G++  AK +F  
Sbjct: 442  YILLIDYHGKSGHPGKALETFEKMKARGIAPNIVA--CNASLYSLAEMGRLGEAKAMFNE 499

Query: 219  ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              + G       ++ ++  Y + G   EAI + + M +   +P+++  N++ID   K G 
Sbjct: 500  LKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAG- 558

Query: 279  DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
              +   ++F  M    + P  +T+N LLA   + G  + A  LF  M   G   +  T+N
Sbjct: 559  RVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFN 618

Query: 339  TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            TLLD +CK  ++DLA ++  +M   N  P+V+T++T+I G+ K  ++ +A+ +F +MK L
Sbjct: 619  TLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL 678

Query: 399  GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM---------------ESSGIRKDAVTYN 443
             +  D V+  T+L    K G+ E+A  + ++                   GI  +A T  
Sbjct: 679  -LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEK 737

Query: 444  ALLGG---------------------YGKQGKYDEVRRMFEQMKADC-VSPNLLTYSTLI 481
            A+L G                       K  K    R +F +   +  V P L  Y+ LI
Sbjct: 738  AILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLI 797

Query: 482  DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
            D + +    + A  +F E K AG   D   Y++LIDA  K+G +     L DEM   G +
Sbjct: 798  DGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCK 857

Query: 542  PNVVTYNSIIDAFGRS------------------ATTECTVDDVERDLGKQKESANLDAM 583
            PN +TYN +I    +S                  + T CT   +   L K   S  LD  
Sbjct: 858  PNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLK---SGRLDDA 914

Query: 584  CSQDDKDVQEAGRTDNQIIKV-----------------FGQLVAEKAGQGKKENRCRQEI 626
                D  V    R ++ I  +                 F ++V E      K      +I
Sbjct: 915  HEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDI 974

Query: 627  LCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            LCI G        F+K+ +  + P++V ++ ++N   R    E+A  L  E++
Sbjct: 975  LCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQ 1027



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 178/350 (50%), Gaps = 2/350 (0%)

Query: 199  MISILGRLGKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            +I +L +  K  +A+N+F     E G   T+  ++ LI  +      + A ++F  MK  
Sbjct: 760  IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSA 819

Query: 258  NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
               P+  TYN++IDA GK G     + +++D+ML  G +P+ IT+N +++   +    + 
Sbjct: 820  GCAPDTFTYNSLIDAHGKSG-KINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDK 878

Query: 318  ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
            A +L+  +V         T+  L+D + K  ++D A E+   M      PN   Y+ +++
Sbjct: 879  AMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVN 938

Query: 378  GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            GY K G +D A   F  M   GI  D  SY  ++ I    GR ++AL   ++++ +G+  
Sbjct: 939  GYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDP 998

Query: 438  DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
            D V YN ++ G G+  + +E   +F +M+   + P+L TY++LI      G+ +EA +I+
Sbjct: 999  DLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIY 1058

Query: 498  REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
             E +  GLK +V  Y+ALI     +G  E A  +  +M   G  PN  T+
Sbjct: 1059 EELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 161/311 (51%), Gaps = 9/311 (2%)

Query: 255  KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI----FDDMLRNGVQPDRITFNSLLAVCS 310
            K   +KP L  YN +ID     G    H VE+    F++M   G  PD  T+NSL+    
Sbjct: 782  KELGVKPTLKVYNLLID-----GFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHG 836

Query: 311  RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
            + G      +L++EM+ RG   +  TYN ++  + K  ++D A ++   + + + SP   
Sbjct: 837  KSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPC 896

Query: 371  TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
            T+  +IDG  K+GRLDDA  MF  M   G   +   YN +++ Y KLG  + A    K M
Sbjct: 897  TFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRM 956

Query: 431  ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
               GIR D  +Y  L+      G+ D+    FE++K   + P+L+ Y+ +I+   +    
Sbjct: 957  VKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRT 1016

Query: 491  KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            +EA+ +F E +  G+  D+  Y++LI  L   G++E A  + +E+   G++PNV TYN++
Sbjct: 1017 EEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNAL 1076

Query: 551  IDAFGRSATTE 561
            I  +  S  +E
Sbjct: 1077 IRGYTLSGNSE 1087



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 166/322 (51%), Gaps = 1/322 (0%)

Query: 194  KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
            K+ + +I     +  V++A N+FE   + G     + +++LI A+G+SG   E   +++ 
Sbjct: 791  KVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDE 850

Query: 254  MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            M     KPN +TYN VI    K        ++++ +++     P   TF  L+    + G
Sbjct: 851  MLTRGCKPNTITYNMVISNLVKSN-RLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSG 909

Query: 314  LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
              + A  +F+ MVH G   +   YN L++   K   +D A E    M  + I P++ +Y+
Sbjct: 910  RLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYT 969

Query: 374  TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
             ++D    AGR+DDAL+ F ++K  G+  D V+YN +++   +  R EEAL +  EM++ 
Sbjct: 970  ILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNR 1029

Query: 434  GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            GI  D  TYN+L+   G  G  +E  +++E+++   + PN+ TY+ LI  Y+  G  + A
Sbjct: 1030 GIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELA 1089

Query: 494  MQIFREFKQAGLKADVVLYSAL 515
              I+++    G   +   ++ L
Sbjct: 1090 YGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 198/449 (44%), Gaps = 41/449 (9%)

Query: 286 IFDDM----LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
           +FD M    +R  V    I F SL     RGGL +A   L  +M   G   + ++YN L+
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFI---RGGLRQAPSAL-EKMREAGFVLNAYSYNGLI 201

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             + +      A E+   M ++ + P++ T+S ++    K   +   + +  EM+ +G+ 
Sbjct: 202 HFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLR 261

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            +  +Y   + +  + G+ +EA  + K M+  G   D VTY  L+       K D+   +
Sbjct: 262 PNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCL 321

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F +MK+    P+ +TY TL+D +S  G   +  +I+ E +  G   DVV ++ L++ALCK
Sbjct: 322 FTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCK 381

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
            G +  A  LLD M K+G+ PN+ TYN++I    R+      +DD             LD
Sbjct: 382 AGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRAN----RLDDA------------LD 425

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
              + +   V+    T   +I   G     K+G   K           L  F+KM    I
Sbjct: 426 LFSNMESLGVEPTAYTYILLIDYHG-----KSGHPGKA----------LETFEKMKARGI 470

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWV--QALS 699
            PN+V  +A L + +      +A  +  EL+        V + ++M     +    +A+ 
Sbjct: 471 APNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIK 530

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           L  E+  +         N+L D L+  G+
Sbjct: 531 LLSEMSKVQCEPDVIVINSLIDTLYKAGR 559



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/487 (22%), Positives = 230/487 (47%), Gaps = 21/487 (4%)

Query: 250 VFNSMKRYNLKPNLVTYNAVIDACG-KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
           VF+ M+R  ++ N+ TY  +  +   +GG+  +      + M   G   +  ++N L+  
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFIRGGL--RQAPSALEKMREAGFVLNAYSYNGLIHF 203

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
             + G  + A  ++  MV  G+   + T++ L+ A  K   +     ++ EM +  + PN
Sbjct: 204 LLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPN 263

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           + TY+  I    + G++D+A  +   M   G G D V+Y  ++       + ++A+ +  
Sbjct: 264 IYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFT 323

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
           +M+SS  + D VTY  LL  +   G  D+V +++ +M+AD  +P+++T++ L++   K G
Sbjct: 324 KMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAG 383

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
              EA  +    ++ G+  ++  Y+ LI  L +   ++ A+ L   M   G+ P   TY 
Sbjct: 384 RINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYI 443

Query: 549 SIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
            +ID  G+S      ++  E+ +  +  + N+ A C+     + E GR   +   +F +L
Sbjct: 444 LLIDYHGKSGHPGKALETFEK-MKARGIAPNIVA-CNASLYSLAEMGRL-GEAKAMFNEL 500

Query: 609 ----VAEKAGQGKKENRCRQEILCI---LGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
               +A  +       +C  ++  +   + +  +M K++ +P+V+  +++++   +    
Sbjct: 501 KSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRV 560

Query: 662 EDASML---LEELRLFDNQV-YGVAHGLLMGYRDNIWVQ-ALSLFDEVKLMDSSTASAFY 716
           E+A  +   +EE+ L    V Y +   LL G      +Q A+ LF+ +     S  +  +
Sbjct: 561 EEAWQMFCRMEEMNLAPTVVTYNI---LLAGLGKEGQIQKAVQLFESMNGHGCSPNTITF 617

Query: 717 NALTDML 723
           N L D L
Sbjct: 618 NTLLDCL 624



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 125/525 (23%), Positives = 226/525 (43%), Gaps = 51/525 (9%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQG-----KLASAMISILGRLGKVDLAK 213
            Y  LL  LG  G+  KA+Q F       E  N  G        + ++  L +  +VDLA 
Sbjct: 582  YNILLAGLGKEGQIQKAVQLF-------ESMNGHGCSPNTITFNTLLDCLCKNDEVDLAL 634

Query: 214  NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
             +F           V  F+ +I  + +    + AI +F+ MK+  L+P+ VT   ++   
Sbjct: 635  KMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGV 693

Query: 274  GKGGVDFKHVVEIFDDMLRN-GVQPDRITFNSLLA-VCSRGGLWEAARNLFNE-MVHRGI 330
             K G   +    I +D     G   DR  +  ++  + +  G  +A   LF E +V R I
Sbjct: 694  IKSG-QIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAI--LFGERLVCRAI 750

Query: 331  DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYSTMIDGYAKAGRLDDAL 389
             +D      ++  +CK  +  +A  +  +   +  + P +  Y+ +IDG+ +   ++ A 
Sbjct: 751  CKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAW 810

Query: 390  NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            N+F EMK  G   D  +YN+++  + K G+  E   +  EM + G + + +TYN ++   
Sbjct: 811  NLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNL 870

Query: 450  GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
             K  + D+   ++  + +   SP   T+  LID   K G   +A ++F      G + + 
Sbjct: 871  VKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNS 930

Query: 510  VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
             +Y+ L++   K G V++A      M KEGIRP++ +Y  ++D    +      VDD   
Sbjct: 931  AIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGR----VDDALH 986

Query: 570  DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI 629
               K K+ A LD      +  +   GR+             E+A                
Sbjct: 987  YFEKLKQ-AGLDPDLVAYNLMINGLGRSQR----------TEEA---------------- 1019

Query: 630  LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
            L +F +M    I P++ T+++++         E+A  + EEL+  
Sbjct: 1020 LSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFI 1064



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 149/361 (41%), Gaps = 34/361 (9%)

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N +L I     R E+   V   M+   IR++  TY  +      +G   +     E+M+ 
Sbjct: 128 NHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMRE 187

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
                N  +Y+ LI    + G  KEA++++R     GLK  +  +SAL+ A  K   +++
Sbjct: 188 AGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKT 247

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE----------S 577
            + LL+EM   G+RPN+ TY   I   GR       +D+  R + +  +          +
Sbjct: 248 VMGLLEEMESMGLRPNIYTYTICIRVLGRDG----KIDEAYRIMKRMDDDGCGPDVVTYT 303

Query: 578 ANLDAMCSQDDKD-----VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
             +DA+C+    D       +   + ++  KV    + +K       ++  +       +
Sbjct: 304 VLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEK-------I 356

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYG-VAHGLLM 687
           + +M      P+VVTF+ ++NA  +     +A  LL+ +R    L +   Y  +  GLL 
Sbjct: 357 WTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLL- 415

Query: 688 GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN 747
             R N    AL LF  ++ +     +  Y  L D     G    A     + K R +  N
Sbjct: 416 --RANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPN 473

Query: 748 V 748
           +
Sbjct: 474 I 474


>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
 gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 257/532 (48%), Gaps = 48/532 (9%)

Query: 183 VKREERKNDQGKLASAMISILGRLGKVDLAKNIFE-TALNEGYGNTVYAFSALISAYGRS 241
           V R  RKN        +I  L R G ++L  N+F+   + + Y      ++ +I  + R 
Sbjct: 102 VGRFARKN-----FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARH 156

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
            +  +A  +F  M++++ KP+  TY+A+I+A G+ G  ++  + + DDMLR  + P R T
Sbjct: 157 NWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG-QWRWAMNLMDDMLRAAIAPSRST 215

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           +N+L+  C   G W  A  +  +M   G+  D+ T+N +L A   G Q   A      M 
Sbjct: 216 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK 275

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM--KFLGIGLDRVSYNTVLSIYAKLGR 419
              + P+  T++ +I   +K G+   AL++F+ M  K      D V++ +++ +Y+  G 
Sbjct: 276 GAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE 335

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            E    V + M + G++ + V+YNAL+G Y   G       +   +K + + P++++Y+ 
Sbjct: 336 IENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 395

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           L++ Y +     +A ++F   ++   K +VV Y+ALIDA   NG +  AV +  +M ++G
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           I+PNVV+  +++ A  RS                 K+  N+D + S      Q  G   N
Sbjct: 456 IKPNVVSVCTLLAACSRS-----------------KKKVNVDTVLSA----AQSRGINLN 494

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
                     A  +  G   N    E+   + ++Q M K K+K + VTF+ +++   R +
Sbjct: 495 T--------AAYNSAIGSYINAA--ELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 544

Query: 660 SFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWV-QALSLFDEVKL 706
            + +A   L+E+         +VY     +L  Y     V +A S+F+++K+
Sbjct: 545 KYPEAISYLKEMEDLSIPLTKEVYS---SVLCAYSKQGQVTEAESIFNQMKM 593



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 193/414 (46%), Gaps = 35/414 (8%)

Query: 148 KFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLG 207
           K +   C  +D   ++  L  R  W    +   F +++   K D  +   A+I+  GR G
Sbjct: 134 KIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPD-AETYDALINAHGRAG 192

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           +   A N+ +  L      +   ++ LI+A G SG  +EA+ V   M    + P+LVT+N
Sbjct: 193 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 252

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            V+ A  K G  +   +  F+ M    V+PD  TFN ++   S+ G    A +LFN M  
Sbjct: 253 IVLSAY-KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 311

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           +              A C+                    P+VVT+++++  Y+  G +++
Sbjct: 312 K-------------RAECR--------------------PDVVTFTSIMHLYSVKGEIEN 338

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
              +F  M   G+  + VSYN ++  YA  G    AL V  +++ +GI  D V+Y  LL 
Sbjct: 339 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 398

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
            YG+  +  + + +F  M+ +   PN++TY+ LID Y   G   EA++IFR+ +Q G+K 
Sbjct: 399 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 458

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +VV    L+ A  ++    +  ++L      GI  N   YNS I ++  +A  E
Sbjct: 459 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 512



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 191/383 (49%), Gaps = 3/383 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCF-AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           +  ++  L   G+ S+A+  F +   KR E + D     S M  +    G+++  + +FE
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM-HLYSVKGEIENCRAVFE 344

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
             + EG    + +++AL+ AY   G    A+SV   +K+  + P++V+Y  ++++ G+  
Sbjct: 345 AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 404

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              K   E+F  M +   +P+ +T+N+L+      G    A  +F +M   GI  ++ + 
Sbjct: 405 QPGK-AKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 463

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TLL A  +  +      +++   ++ I+ N   Y++ I  Y  A  L+ A+ ++  M+ 
Sbjct: 464 CTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK 523

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             +  D V++  ++S   ++ ++ EA+   KEME   I      Y+++L  Y KQG+  E
Sbjct: 524 KKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTE 583

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +F QMK     P+++ Y++++  Y+    + +A ++F E +  G++ D +  SAL+ 
Sbjct: 584 AESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMR 643

Query: 518 ALCKNGLVESAVSLLDEMTKEGI 540
           A  K G   +   L+D M ++ I
Sbjct: 644 AFNKGGQPSNVFVLMDLMREKEI 666



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 196/409 (47%), Gaps = 9/409 (2%)

Query: 171 EWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNT--- 227
           ++SKA+  F   +K  + + D     + +I  L +LG+   A ++F + + E        
Sbjct: 263 QYSKALSYFEL-MKGAKVRPDTTTF-NIIIYCLSKLGQSSQALDLFNS-MREKRAECRPD 319

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  F++++  Y   G  +   +VF +M    LKPN+V+YNA++ A    G+     + + 
Sbjct: 320 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS-GTALSVL 378

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            D+ +NG+ PD +++  LL    R      A+ +F  M       ++ TYN L+DA    
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 438

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             +  A EI  +M    I PNVV+  T++   +++ +  +   + S  +  GI L+  +Y
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 498

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N+ +  Y      E+A+ + + M    ++ D+VT+  L+ G  +  KY E     ++M+ 
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             +      YS+++  YSK G   EA  IF + K AG + DV+ Y++++ A   +     
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 618

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
           A  L  EM   GI P+ +  ++++ AF +          V  DL ++KE
Sbjct: 619 ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVF--VLMDLMREKE 665


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 207/407 (50%), Gaps = 11/407 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDL---AKNI 215
           ++ L+    + G +S AIQCF     R  RK++      +   +  RL K++L   A   
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCF-----RLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAF 212

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CG 274
           +E  L+ GY   V  F+ L+    +     EA  +F  + +  L+P +V++N +I+  C 
Sbjct: 213 YEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCK 272

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
            G +D    ++ F  M+ N V PD  T++ L+    + G  + A  LF EM  RG+  + 
Sbjct: 273 SGNLDQGFRLKRF--MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPND 330

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            T+ TL++  C   + DL  EI  +M  K + P+V+TY+T+I+G  K G L +A  +  E
Sbjct: 331 VTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIE 390

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G+  D+ +Y  ++    K G  E AL + KEM   GI  D V + AL+ G+ ++G+
Sbjct: 391 MTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQ 450

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
             E  R   +M    + P+  TY+ +I  + K G  K   ++ +E +  G    VV Y+ 
Sbjct: 451 VIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV 510

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           L++ LCK G +++A  LLD M   G+ P+ +TYN +++   +    E
Sbjct: 511 LLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNRE 557



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 186/358 (51%), Gaps = 3/358 (0%)

Query: 202 ILGRLGKVDLAKNIFETALN-EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           ++ R GK + A ++F + L   G   +   FS L++AY  SGY  +AI  F  ++++NL+
Sbjct: 129 VVSRKGK-NSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQ 187

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
               +   + D   K  +        ++++L  G  PD   FN L+    +      A+ 
Sbjct: 188 IPFHSCGYLFDRLMKLNLT-SPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQL 246

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           LF E+  RG+   + ++NTL++  CK   +D  F +   M    + P+V TYS +I+G  
Sbjct: 247 LFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLC 306

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K G+LDDA  +F EM   G+  + V++ T+++ +   GR +  + + ++M   G++ D +
Sbjct: 307 KEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVI 366

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TYN L+ G  K G   E +++  +M    + P+  TY+ LID   K G  + A++I +E 
Sbjct: 367 TYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEM 426

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            + G++ D V ++ALI   C+ G V  A   L EM + GI+P+  TY  +I  F +  
Sbjct: 427 VKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKG 484



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 182/345 (52%), Gaps = 6/345 (1%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K++ A+ +F      G   TV +F+ LI+ Y +SG   +   +   M    + P++ TY+
Sbjct: 240 KINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYS 299

Query: 268 AVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
            +I+  C +G +D  +  ++F +M   G+ P+ +TF +L+      G  +    ++ +M+
Sbjct: 300 VLINGLCKEGQLDDAN--KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQML 357

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +G+  D+ TYNTL++ +CK   +  A +++ EM  + + P+  TY+ +IDG  K G L+
Sbjct: 358 RKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLE 417

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            AL +  EM   GI LD V++  ++S + + G+  EA    +EM  +GI+ D  TY  ++
Sbjct: 418 SALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVI 477

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G+ K+G      ++ ++M+ D   P ++TY+ L++   K G  K A  +       G+ 
Sbjct: 478 HGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVV 537

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            D + Y+ L++  CK+G  E    L  E   +G+  +  +Y S+I
Sbjct: 538 PDDITYNILLEGHCKHGNREDFDKLQSE---KGLVQDYGSYTSLI 579



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 184/386 (47%), Gaps = 12/386 (3%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G     + F+ L+   +  G +  A   F  +    +     +   L D + K      A
Sbjct: 150 GTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPA 209

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
           +    E+      P+V  ++ ++    K  ++++A  +F E+   G+    VS+NT+++ 
Sbjct: 210 WAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLING 269

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           Y K G  ++   + + M  + +  D  TY+ L+ G  K+G+ D+  ++F +M    + PN
Sbjct: 270 YCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPN 329

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +T++TLI+ +   G     M+I+++  + G+K DV+ Y+ LI+ LCK G +  A  L+ 
Sbjct: 330 DVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVI 389

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ-------KESANLDAMCSQ 586
           EMT+ G++P+  TY  +ID   +    E  + ++ +++ K+         +A +   C +
Sbjct: 390 EMTQRGLKPDKFTYTMLIDGCCKEGDLESAL-EIRKEMVKEGIELDNVAFTALISGFCRE 448

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNV 645
               V EA RT  ++++  G    +          C++ ++     + ++M      P V
Sbjct: 449 G--QVIEAERTLREMLEA-GIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGV 505

Query: 646 VTFSAILNACSRCNSFEDASMLLEEL 671
           VT++ +LN   +    ++A+MLL+ +
Sbjct: 506 VTYNVLLNGLCKQGQMKNANMLLDAM 531


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 175/307 (57%), Gaps = 1/307 (0%)

Query: 252 NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
           +S+   N KP +++Y+ +IDA  K   +     ++F++M   G+ P  I++ SL+     
Sbjct: 231 SSLYGINFKPVVISYSIIIDALCKDRRE-DEARDLFEEMKVQGMTPTVISYTSLIHGFCC 289

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
           GG WE A+ LFNEMV++G+  ++ T+N L+D +CK  ++  A +++  M  + I PN++T
Sbjct: 290 GGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLT 349

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+++I+G+   G L+ A  +F  M   G   D + Y  +++ Y K  + EEA+ +   M 
Sbjct: 350 YNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGML 409

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G R D  TY ALL G  + GK  + +++F  MK   +  +L  Y   ++   K G   
Sbjct: 410 QVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLF 469

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EAM++F + K   +K D+  ++ LID LCK G +E+A  L +++ +E ++P+VVTYN +I
Sbjct: 470 EAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 529

Query: 552 DAFGRSA 558
             F R  
Sbjct: 530 HEFCRGG 536



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 209/423 (49%), Gaps = 13/423 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L++ L      SKA   F    K     N        ++  L R G + +A  + + 
Sbjct: 169 YTTLIKGLCMEHRISKAALLFTRMQKLGCTPN--AITYGTLMKGLCRTGNISIALKLHQE 226

Query: 219 ALNEG--YG----NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
            LN+   YG      V ++S +I A  +     EA  +F  MK   + P +++Y ++I  
Sbjct: 227 MLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHG 286

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
              GG  ++    +F++M+  GVQP+ +TFN L+ V  + G    A++L   M+ RGI  
Sbjct: 287 FCCGG-KWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVP 345

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           ++ TYN+L++  C    ++ A E+   MP+K   P+V+ Y+ +I+GY K  ++++A+ ++
Sbjct: 346 NLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLY 405

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           + M  +G   D  +Y  +L+   + G+  +A  +   M+  GI  D   Y   L G  K 
Sbjct: 406 NGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKN 465

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G   E   +F ++K+  +  ++  ++ LID   K G  + A ++F +  Q  L+ DVV Y
Sbjct: 466 GCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTY 525

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD----DVE 568
           + +I   C+ G V  A  L  +M K G  P+ +TY ++I  F  S   E  V+     V+
Sbjct: 526 NIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 585

Query: 569 RDL 571
           RD+
Sbjct: 586 RDV 588



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 224/469 (47%), Gaps = 43/469 (9%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           +F+ L+S   +  +  +   ++N M+   + P+  T N +++  C    V     + +  
Sbjct: 98  SFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVG--EGLAVMA 155

Query: 289 DMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            +LR G  PD +T+ +L+  +C    + +AA  LF  M   G   +  TY TL+  +C+ 
Sbjct: 156 GILRRGYIPDIVTYTTLIKGLCMEHRISKAAL-LFTRMQKLGCTPNAITYGTLMKGLCRT 214

Query: 348 AQMDLAFEIMAEMP------AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             + +A ++  EM         N  P V++YS +ID   K  R D+A ++F EMK  G+ 
Sbjct: 215 GNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMT 274

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
              +SY +++  +   G++EEA  +  EM + G++ + VT+N L+    K+GK  E + +
Sbjct: 275 PTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDL 334

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            E M    + PNLLTY++LI+ +   G    A ++F      G + DV+ Y+ LI+  CK
Sbjct: 335 LEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCK 394

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK------ 575
              VE A+ L + M + G RP+V TY +++    +       V D ++  G  K      
Sbjct: 395 TSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK----VGDAKKLFGVMKVYGIPG 450

Query: 576 ----ESANLDAMCSQDDKDVQEAGRTDNQI--------IKVFGQLVAEKAGQGKKENRCR 623
                   L+ +C   +  + EA    N++        I+ F  L+      GK E    
Sbjct: 451 DLYIYGIFLNGLCK--NGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWE 508

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                   +F+K+ + +++P+VVT++ +++   R      A++L +++ 
Sbjct: 509 --------LFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKME 549



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 186/350 (53%), Gaps = 5/350 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L +  + D A+++FE    +G   TV ++++LI  +   G  +EA  +FN M  
Sbjct: 246 SIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVN 305

Query: 257 YNLKPNLVTYNAVIDACGKGG--VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
             ++PN+VT+N +ID   K G  ++ K ++E+   M++ G+ P+ +T+NSL+      G 
Sbjct: 306 QGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEV---MIQRGIVPNLLTYNSLIEGFCLVGD 362

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             +AR LF  M  +G + D+  Y  L++  CK ++++ A ++   M      P+V TY  
Sbjct: 363 LNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGA 422

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++ G  + G++ DA  +F  MK  GI  D   Y   L+   K G   EA+ +  +++S  
Sbjct: 423 LLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYN 482

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I+ D   +N L+ G  K GK +    +FE++  + + P+++TY+ +I  + +GG   +A 
Sbjct: 483 IKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKAN 542

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            +F++ ++ G   D + Y+ LI    ++  +E  V LL  M +  +  +V
Sbjct: 543 ILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 223/473 (47%), Gaps = 49/473 (10%)

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C  G +      + F  M+ +   P   +F  LL+  ++   +     L+N+M   GI  
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D  T N LL+ +C   ++     +MA +  +   P++VTY+T+I G     R+  A  +F
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM--ESS--GI--RKDAVTYNALL 446
           + M+ LG   + ++Y T++    + G    AL + +EM  +SS  GI  +   ++Y+ ++
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
               K  + DE R +FE+MK   ++P +++Y++LI  +  GG ++EA ++F E    G++
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            +VV ++ LID LCK G V  A  LL+ M + GI PN++TYNS+I+ F       C V D
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGF-------CLVGD 362

Query: 567 VE--RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
           +   R+L     S      C  D              +  +  L+       K E     
Sbjct: 363 LNSARELFVSMPSKG----CEPD--------------VICYTVLINGYCKTSKVEEA--- 401

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYG 680
                + ++  M ++  +P+V T+ A+L    +     DA  L   ++++    D  +YG
Sbjct: 402 -----MKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYG 456

Query: 681 V-AHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
           +  +GL    ++    +A+ LF+++K  +       +N L D L   G+   A
Sbjct: 457 IFLNGLC---KNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETA 506



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 105/211 (49%), Gaps = 3/211 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+       +  +A++ +   ++  +R +   K   A+++ L + GKV  AK +F  
Sbjct: 385 YTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDV--KTYGALLTGLFQGGKVGDAKKLFGV 442

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G    +Y +   ++   ++G   EA+ +FN +K YN+K ++  +N +ID   K G 
Sbjct: 443 MKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAG- 501

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +   E+F+ + +  +QPD +T+N ++    RGG    A  LF +M   G   D  TY 
Sbjct: 502 KLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYA 561

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
           TL+    +  +++   E++  M  +++S +V
Sbjct: 562 TLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 252/493 (51%), Gaps = 39/493 (7%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I  L +  +++ A+ +F+  L      ++  ++ LI  Y ++G  +++  V   M
Sbjct: 216 IYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM 275

Query: 255 KRYNLKPNLVTYNAVIDACGKGGV--DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           K  +++P+L+T+N ++    K G+  D ++V++   D+   G  PD  TF+ L    S  
Sbjct: 276 KADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL---GFVPDAFTFSILFDGYSSN 332

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              EAA  ++   V  G+  + +T + LL+A+CK  +++ A EI+    AK + PN V Y
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +TMIDGY + G L  A      M+  G+  D ++YN ++  + +LG  E A     +M+ 
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G+     TYN L+GGYG++ ++D+   + ++M+ +   PN+++Y TLI+   KG    E
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A  + R+ +  G+   V +Y+ LID  C  G +E A     EM K+GI  N+VTYN++ID
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
             G S T            GK  E+ +L    S+  K ++    T N +I  +G      
Sbjct: 573 --GLSMT------------GKLSEAEDLLLEISR--KGLKPDVFTYNSLISGYGF----- 611

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           AG  +   RC       + ++++M +  IKP + T+  +++ C++    E    L  E+ 
Sbjct: 612 AGNVQ---RC-------IALYEEMKRSGIKPTLKTYHLLISLCTK-EGIELTERLFGEMS 660

Query: 673 LF-DNQVY-GVAH 683
           L  D  VY GV H
Sbjct: 661 LKPDLLVYNGVLH 673



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 247/507 (48%), Gaps = 29/507 (5%)

Query: 180 AFAVKREERKNDQGKLASAMISILGRLGK-VDLAKNIFETALNEGYGNTVYAFSALISAY 238
           AF++     K+D    +  ++S+L    K +  A ++F    NEG   +  + + L+   
Sbjct: 98  AFSLSSPSLKHD---FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHL 154

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
            ++   +  I+VF ++   + +P+   Y   I A  K   D    +E+F+ M  + + P 
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLS-DVGKGLELFNRMKHDRIYPS 213

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
              +N L+    +G     A  LF+EM+ R +   + TYNTL+D  CK    + +F++  
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
            M A +I P+++T++T++ G  KAG ++DA N+  EMK LG   D  +++ +   Y+   
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           + E AL V +    SG++ +A T + LL    K+GK ++   +  +  A  + PN + Y+
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           T+ID Y + G    A       ++ G+K D + Y+ LI   C+ G +E+A   +++M  +
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESAN----LDAMCSQD----- 587
           G+ P+V TYN +I  +GR    +   D ++   D G      +    ++ +C        
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513

Query: 588 ---DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
               +D+++ G +    ++++  L+     +GK E+  R          ++M K  I+ N
Sbjct: 514 QIVKRDMEDRGVSPK--VRIYNMLIDGCCSKGKIEDAFR--------FSKEMLKKGIELN 563

Query: 645 VVTFSAILNACSRCNSFEDASMLLEEL 671
           +VT++ +++  S      +A  LL E+
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEI 590



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 190/392 (48%), Gaps = 7/392 (1%)

Query: 160 TFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETA 219
           + LL  L   G+  KA +     + +    N+   + + MI    R G +  A+   E  
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEV--IYNTMIDGYCRKGDLVGARMKIEAM 415

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
             +G      A++ LI  +   G  + A    N MK   + P++ TYN +I   G+   +
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK-YE 474

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
           F    +I  +M  NG  P+ +++ +L+    +G     A+ +  +M  RG+   +  YN 
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+D  C   +++ AF    EM  K I  N+VTY+T+IDG +  G+L +A ++  E+   G
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           +  D  +YN+++S Y   G  +  + + +EM+ SGI+    TY+ L+    K+G  +   
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTE 653

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           R+F +M    + P+LL Y+ ++  Y+  G  ++A  + ++  +  +  D   Y++LI   
Sbjct: 654 RLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQ 710

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            K G +    SL+DEM    + P   TYN I+
Sbjct: 711 LKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 170/370 (45%), Gaps = 32/370 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I     LG+++ A+        +G   +V  ++ LI  YGR     +   +   M+ 
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               PN+V+Y  +I+   KG    +  + +  DM   GV P    +N L+  C   G  E
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQI-VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A     EM+ +GI+ ++ TYNTL+D +    ++  A +++ E+  K + P+V TY+++I
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606

Query: 377 DGYAKAGRLDDALNMFSEMKFLGI-----------------GL--------------DRV 405
            GY  AG +   + ++ EMK  GI                 G+              D +
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLL 666

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            YN VL  YA  G  E+A  + K+M    I  D  TYN+L+ G  K GK  EVR + ++M
Sbjct: 667 VYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 726

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
            A  + P   TY+ ++  + +   Y  A   +RE ++ G   DV + + L+  L +    
Sbjct: 727 NAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRS 786

Query: 526 ESAVSLLDEM 535
           + A  ++ EM
Sbjct: 787 KEAEIVISEM 796


>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 860

 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 141/543 (25%), Positives = 253/543 (46%), Gaps = 54/543 (9%)

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   D  TY T++  + +  Q     +++ EM      PN VTY+ +I  Y +A  L++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           +N+F++M+  G   DRV+Y T++ I+AK G  + A+ + + M++ G+  D  TY+ ++  
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            GK G      ++F +M     +PNL+TY+ ++D+++K   Y+ A++++R+ + AG + D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPD 538

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            V YS +++ L   G +E A ++  EM ++   P+   Y  ++D +G++   E       
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE------- 591

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
                Q   A L A        +     T N ++  F  L   K  +  +          
Sbjct: 592 --KAWQWYQAMLHA-------GLLPNVPTCNSLLSTF--LRVNKIAEAYE---------- 630

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
              + Q M  L ++P++ T++ +L+ C+   S  D     + +    +     AH  L+ 
Sbjct: 631 ---LLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGYCGQLMASTGHP----AHMFLLK 683

Query: 689 YR------DNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
                   +N+   A +  D +   D  +     +A+ D L   GQK  A  V     ++
Sbjct: 684 MPAAGPNGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQK 743

Query: 743 QVWENVWSE-SC----LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGK 797
            V+ +   E SC    ++LH+MS G A   +   L      +      P  + I+TGWG+
Sbjct: 744 NVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAWFRRQMLVSGTCPSRIDIVTGWGR 803

Query: 798 HSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDD 857
            S+V G   +R+AVE LL   G+PF+  + N G F+  G  +  WL +S        H +
Sbjct: 804 RSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVGCGESLNKWLLQS--------HVE 855

Query: 858 RTH 860
           R H
Sbjct: 856 RMH 858



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 165/327 (50%), Gaps = 10/327 (3%)

Query: 247 AISVFNSMKRY-NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A+  F  +KR    K +  TY  ++   G+    F  + ++ D+M+R+G QP+ +T+N L
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK-QFGAINKLLDEMVRDGCQPNTVTYNRL 405

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    R      A N+FN+M   G   D  TY TL+D   K   +D+A ++   M A  +
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           SP+  TYS +I+   KAG L  A  +F EM   G   + V+YN ++ ++AK   ++ AL 
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALK 525

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + ++M+++G   D VTY+ ++   G  G  +E   +F +M+     P+   Y  L+D++ 
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G  ++A Q ++    AGL  +V   ++L+    +   +  A  LL  M   G+RP++ 
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 645

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLG 572
           TY  ++          CT    + D+G
Sbjct: 646 TYTLLLSC--------CTDGRSKLDMG 664



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 149/309 (48%), Gaps = 1/309 (0%)

Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
           F + +KR+      G   + M+  LGR  +      + +  + +G       ++ LI +Y
Sbjct: 350 FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSY 409

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
           GR+ Y  EA++VFN M+    KP+ VTY  +ID   K G      ++++  M   G+ PD
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF-LDIAMDMYQRMQAGGLSPD 468

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
             T++ ++    + G   AA  LF EMV +G   ++ TYN ++D   K      A ++  
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYR 528

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
           +M      P+ VTYS +++     G L++A  +F+EM+      D   Y  ++ ++ K G
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
             E+A    + M  +G+  +  T N+LL  + +  K  E   + + M A  + P+L TY+
Sbjct: 589 NVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648

Query: 479 TLIDVYSKG 487
            L+   + G
Sbjct: 649 LLLSCCTDG 657



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 157/336 (46%), Gaps = 13/336 (3%)

Query: 232 SALIS-AYGRSGYCQEAISVFNSMKRYNLKPN----LVTYNAVIDACGKGGV-----DFK 281
           +AL S  Y  SGY  E +S  + ++R+   P     L      IDA     V     D+ 
Sbjct: 288 TALTSRQYCNSGYIVENVS--SVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYG 345

Query: 282 HVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           + +  F  + R  G + D  T+ +++    R   + A   L +EMV  G   +  TYN L
Sbjct: 346 NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRL 405

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           + +  +   ++ A  +  +M      P+ VTY T+ID +AKAG LD A++M+  M+  G+
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D  +Y+ +++   K G    A  +  EM   G   + VTYN ++  + K   Y    +
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALK 525

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           ++  M+     P+ +TYS +++V    G  +EA  +F E +Q     D  +Y  L+D   
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           K G VE A      M   G+ PNV T NS++  F R
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLR 621



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/313 (19%), Positives = 127/313 (40%), Gaps = 38/313 (12%)

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           V ++ + L RF       + +++ G+R DA   N +L    +   Y      F  +K   
Sbjct: 302 VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWLKRQ- 357

Query: 470 VSPNLL----TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             P       TY+T++    +   +    ++  E  + G + + V Y+ LI +  +   +
Sbjct: 358 --PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
             A+++ ++M + G +P+ VTY ++ID   ++        D+  D+ ++ ++  L     
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL-----DIAMDMYQRMQAGGLSPDTF 470

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL-----------CILGVFQ 634
                +   G+  +  +    +L  E   QG   N     I+             L +++
Sbjct: 471 TYSVIINCLGKAGH--LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYR 528

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYR 690
            M     +P+ VT+S ++     C   E+A  +  E++    + D  VYG+    L G  
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD-LWGKA 587

Query: 691 DNI-----WVQAL 698
            N+     W QA+
Sbjct: 588 GNVEKAWQWYQAM 600


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 192/354 (54%), Gaps = 7/354 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R G ++L        ++ G    V +++A++    + G    A ++ + +     KP+
Sbjct: 163 LKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPS 222

Query: 263 LVTYNAVIDACGKGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           ++TYN +++    G ++ K V    EI   M +N V  +  T+  L+   SR    E A 
Sbjct: 223 VITYNTLLN----GYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAE 278

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            LF+EM+ +GI+ D++ Y ++++  CK   M  AF +  EM  + + PN  TY  +I+G 
Sbjct: 279 KLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGA 338

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            KAG +  A  M ++M+  G+ ++RV +NT++  Y K G  +EAL +   M+  G   DA
Sbjct: 339 CKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDA 398

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
            T N +  G+ +  + +E +R+   M+   V+PN++++S LID+Y K   + EA ++F+ 
Sbjct: 399 FTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKV 458

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            ++ G    VV Y+A I+  CK G +E A  L++EM + G+ P+  TY S+ID 
Sbjct: 459 MEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 512



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 172/324 (53%), Gaps = 1/324 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  ++ LI  Y RS   +EA  +F+ M +  ++P++  Y ++I+   K G + K    +F
Sbjct: 258 VTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG-NMKRAFVLF 316

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           D+M    + P+  T+ +L+    + G  +AA  + N+M  +G+D +   +NTL+D  CK 
Sbjct: 317 DEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKK 376

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             +D A  +   M  K    +  T + +  G+ ++ R ++A  +   M+  G+  + VS+
Sbjct: 377 GMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSF 436

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           + ++ IY K   F EA  + K ME  G     VTYNA +  Y K+GK +E  ++  +M+ 
Sbjct: 437 SILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQE 496

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + P+  TY++LID     G    A+++F E  Q GL  +VV Y+ +I  L K+G  + 
Sbjct: 497 RGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADE 556

Query: 528 AVSLLDEMTKEGIRPNVVTYNSII 551
           A  L DEM KEGI P+   Y+S+I
Sbjct: 557 AFKLYDEMNKEGIVPDDGIYSSLI 580



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 177/341 (51%), Gaps = 4/341 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    R  K++ A+ +F+  L +G    VY ++++I+   + G  + A  +F+ M  
Sbjct: 262 TMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTE 321

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             L PN  TY A+I+   K G + K    + +DM   GV  +R+ FN+L+   C +G + 
Sbjct: 322 RRLVPNAYTYGALINGACKAG-EMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMID 380

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA R L N M  +G + D FT N +    C+  + + A  ++  M  + ++PNVV++S +
Sbjct: 381 EALR-LQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSIL 439

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID Y K     +A  +F  M+  G     V+YN  +  Y K G+ EEA  +  EM+  G+
Sbjct: 440 IDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGL 499

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  TY +L+ G    G  D    +F +M    ++ N++TY+ +I   SK G   EA +
Sbjct: 500 MPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFK 559

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNG-LVESAVSLLDEM 535
           ++ E  + G+  D  +YS+LI +L K G LV    +++D +
Sbjct: 560 LYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRI 600



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 198/441 (44%), Gaps = 59/441 (13%)

Query: 280 FKHVVEIFDDMLRNGVQPD-RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           F   +E+FD   + G + D R  F  LLA+  R G  E       +MV  GI+  + ++ 
Sbjct: 134 FDSSLEVFDYARKKGFEIDERSCFEFLLAL-KRSGNMELCVEFLRQMVDSGIEIRVCSWT 192

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG-------------------- 378
            ++D +CK  ++  A  +M E+  K   P+V+TY+T+++G                    
Sbjct: 193 AVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKN 252

Query: 379 ---------------YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
                          Y+++ ++++A  +F EM   GI  D   Y ++++   K G  + A
Sbjct: 253 VVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRA 312

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
            ++  EM    +  +A TY AL+ G  K G+      M   M++  V  N + ++TL+D 
Sbjct: 313 FVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDG 372

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y K G+  EA+++    +Q G + D    + +    C++   E A  LL  M + G+ PN
Sbjct: 373 YCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPN 432

Query: 544 VVTYNSIIDAFGRS---ATTECTVDDVERDLGKQKESANLDAMCSQDDK--DVQEAGRTD 598
           VV+++ +ID + +    A        +E+  GK       +A   +  K   ++EA +  
Sbjct: 433 VVSFSILIDIYCKEQNFAEARRLFKVMEKK-GKAPSVVTYNAFIERYCKKGKMEEAYKLI 491

Query: 599 NQIIK--------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
           N++ +         +  L+  +   G  +          L +F +M +L +  NVVT++ 
Sbjct: 492 NEMQERGLMPDTYTYTSLIDGERASGNVDR--------ALELFNEMPQLGLNRNVVTYTV 543

Query: 651 ILNACSRCNSFEDASMLLEEL 671
           I++  S+    ++A  L +E+
Sbjct: 544 IISGLSKDGRADEAFKLYDEM 564



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 172/387 (44%), Gaps = 45/387 (11%)

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           +VE F DML      +R+ F+S L V             F+    +G + D  +    L 
Sbjct: 116 IVEKFCDMLFRVYMDNRM-FDSSLEV-------------FDYARKKGFEIDERSCFEFLL 161

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A+ +   M+L  E + +M    I   V +++ ++DG  K G +  A  +  E+   G   
Sbjct: 162 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 221

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
             ++YNT+L+ Y ++        +   ME + +  +  TY  L+  Y +  K +E  ++F
Sbjct: 222 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLF 281

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           ++M    + P++  Y+++I+   K G  K A  +F E  +  L  +   Y ALI+  CK 
Sbjct: 282 DEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKA 341

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           G +++A  ++++M  +G+  N V +N+++D + +               G   E+  L  
Sbjct: 342 GEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKK--------------GMIDEALRLQN 387

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
           +  Q  K  +    T N I   F            + NR R+E   +L     M +  + 
Sbjct: 388 IMQQ--KGFEIDAFTCNIIASGFC-----------RSNR-REEAKRLL---LTMEERGVA 430

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLE 669
           PNVV+FS +++   +  +F +A  L +
Sbjct: 431 PNVVSFSILIDIYCKEQNFAEARRLFK 457


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 213/403 (52%), Gaps = 3/403 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+    + G+W +A++ F   ++R     D   L+  M S L + GK+  A+++F+T
Sbjct: 295 YNNLIYGYSSTGQWKEAVRVFK-EMRRHSILPDVVTLSMLMGS-LCKYGKIKEARDVFDT 352

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G    V++++ +++ Y   G   +   +F+ M    + P+  T+N +I A    G+
Sbjct: 353 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 412

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K ++ IF++M  +GV+PD +T+ +++A   R G  + A   FN+M+ +G+  D + YN
Sbjct: 413 LDKAMI-IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 471

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+   C    +  A E+++E+    +  ++V +S++I+   K GR+ DA N+F     +
Sbjct: 472 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 531

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D V YN ++  Y  +G+ E+AL V   M S+GI  + V Y  L+ GY K G+ DE 
Sbjct: 532 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 591

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +F +M    + P+ + YS +ID   + G    A   F E  ++G+  D+  Y+ ++  
Sbjct: 592 LSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRG 651

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           L KN   + A+ L  E+    ++ N++T N++ID   ++   E
Sbjct: 652 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 694



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 186/379 (49%), Gaps = 39/379 (10%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD+  ++F+  L +G     Y F+ LI AY   G   +A+ +FN M+ + +KP++VTY  
Sbjct: 379 VDMT-DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRT 437

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA--------- 317
           VI A C  G +D    +E F+ M+  GV PD+  +N L+   C+ G L +A         
Sbjct: 438 VIAALCRIGKMD--DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 495

Query: 318 -------------------------ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
                                    A+N+F+  V+ G+  D   YN L+D  C   +M+ 
Sbjct: 496 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEK 555

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A  +   M +  I PNVV Y T+++GY K GR+D+ L++F EM   GI    + Y+ ++ 
Sbjct: 556 ALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIID 615

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              + GR   A +   EM  SGI  D  TYN +L G  K   +DE   +F++++A  V  
Sbjct: 616 GLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKI 675

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           N++T +T+ID   +    +EA  +F    ++ L   VV YS +I  L K GLVE A  + 
Sbjct: 676 NIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMF 735

Query: 533 DEMTKEGIRPNVVTYNSII 551
             M   G  PN    N ++
Sbjct: 736 SSMQNAGCEPNSRLLNHVV 754



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 141/541 (26%), Positives = 252/541 (46%), Gaps = 42/541 (7%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V A++ +I  + + G   +A  +F  M +  + P+LVTYN+V+ A C    +D       
Sbjct: 222 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEA--F 279

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M+   V P+  T+N+L+   S  G W+ A  +F EM    I  D+ T + L+ ++CK
Sbjct: 280 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 339

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A ++   M  K  +P+V +Y+ M++GYA  G L D  ++F  M   GI  D  +
Sbjct: 340 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 399

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +N ++  YA  G  ++A+++  EM   G++ D VTY  ++    + GK D+    F QM 
Sbjct: 400 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 459

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V+P+   Y+ LI  +   G   +A ++  E    G+  D+V +S++I+ LCK G V 
Sbjct: 460 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 519

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A ++ D     G+ P+ V YN ++D +       C V  +E+ L         DAM S 
Sbjct: 520 DAQNIFDLTVNVGLHPDAVVYNMLMDGY-------CLVGKMEKALRV------FDAMVS- 565

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
                  AG   N +   +G LV      G+ +          L +F++M +  IKP+ +
Sbjct: 566 -------AGIEPNVV--GYGTLVNGYCKIGRIDEG--------LSLFREMLQRGIKPSTI 608

Query: 647 TFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVA-HGLLMGYRDNIWVQALSLF 701
            +S I++          A M   E+       D   Y +   GL   +++  + +A+ LF
Sbjct: 609 LYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGL---FKNRCFDEAIFLF 665

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSS 761
            E++ M+        N + D ++   +   A+ +     R ++  +V + S +  +L+  
Sbjct: 666 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKE 725

Query: 762 G 762
           G
Sbjct: 726 G 726



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 229/493 (46%), Gaps = 46/493 (9%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRYNLKPNL 263
           R  + +LA   F   L  G    +   + L+  +  +    EA+ +  +        P++
Sbjct: 126 RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDV 185

Query: 264 VTYNAVIDAC---GKGGVDFKHVVEIFDDMLRNGVQ------PDRITFNSLLAVCSRGGL 314
            +Y+ ++ +    GK G          DD+LR   +      P+ + +N+++    + G 
Sbjct: 186 FSYSILLKSLCDQGKSGQA--------DDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 237

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A +LF EMV RGI  D+ TYN+++ A+CK   MD A   + +M  K + PN  TY+ 
Sbjct: 238 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 297

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I GY+  G+  +A+ +F EM+   I  D V+ + ++    K G+ +EA  V   M   G
Sbjct: 298 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 357

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D  +YN +L GY  +G   ++  +F+ M  D ++P+  T++ LI  Y+  G+  +AM
Sbjct: 358 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 417

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            IF E +  G+K DVV Y  +I ALC+ G ++ A+   ++M  +G+ P+   YN +I  F
Sbjct: 418 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 477

Query: 555 --------GRSATTECTVDDVERDLGKQKESANLDAMC-------SQDDKDVQ-EAGRTD 598
                    +   +E   + +  D+     S+ ++ +C       +Q+  D+    G   
Sbjct: 478 CTHGSLLKAKELISEIMNNGMHLDI--VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 535

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
           + +  V+  L+      GK E   R        VF  M    I+PNVV +  ++N   + 
Sbjct: 536 DAV--VYNMLMDGYCLVGKMEKALR--------VFDAMVSAGIEPNVVGYGTLVNGYCKI 585

Query: 659 NSFEDASMLLEEL 671
              ++   L  E+
Sbjct: 586 GRIDEGLSLFREM 598



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 194/405 (47%), Gaps = 5/405 (1%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           D YTF  L++   N G   KA+    F   R+            +I+ L R+GK+D A  
Sbjct: 396 DFYTFNVLIKAYANCGMLDKAM--IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 453

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
            F   +++G     YA++ LI  +   G   +A  + + +    +  ++V ++++I+   
Sbjct: 454 KFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 513

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K G        IFD  +  G+ PD + +N L+      G  E A  +F+ MV  GI+ ++
Sbjct: 514 KLG-RVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 572

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
             Y TL++  CK  ++D    +  EM  + I P+ + YS +IDG  +AGR   A   F E
Sbjct: 573 VGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHE 632

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   GI +D  +YN VL    K   F+EA+ + KE+ +  ++ + +T N ++ G  +  +
Sbjct: 633 MTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 692

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            +E + +F  +    + P+++TYS +I    K GL +EA  +F   + AG + +  L + 
Sbjct: 693 VEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNH 752

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
           ++  L K   +  A + L ++ +       +T   ++D F    T
Sbjct: 753 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGT 797



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 145/576 (25%), Positives = 249/576 (43%), Gaps = 107/576 (18%)

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLV-----TYNAVIDACGKGGVDFKHVVEIFDDM 290
           SA  RSG    A+++FN        P ++     TY  ++D C +     +  +  F  +
Sbjct: 83  SAACRSGPAL-AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRP-ELALAFFGQL 140

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARN--LFNEMVHR----GIDQDIFTYNTLLDAI 344
           LR G++ + I  N LL      G  EA R     + ++HR    G   D+F+Y+ LL ++
Sbjct: 141 LRTGLRVNIIIANHLLE-----GFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 195

Query: 345 C---KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           C   K  Q D    +MAE  A   SPNVV Y+T+IDG+ K G ++ A ++F EM   GI 
Sbjct: 196 CDQGKSGQADDLLRMMAEGGAV-CSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP 254

Query: 402 LDRVSYNTVLSI-----------------------------------YAKLGRFEEALLV 426
            D V+YN+V+                                     Y+  G+++EA+ V
Sbjct: 255 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 314

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            KEM    I  D VT + L+G   K GK  E R +F+ M     +P++ +Y+ +++ Y+ 
Sbjct: 315 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 374

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G   +   +F      G+  D   ++ LI A    G+++ A+ + +EM   G++P+VVT
Sbjct: 375 KGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVT 434

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF- 605
           Y ++I A  R              +GK  ++  ++      D+ V       N +I+ F 
Sbjct: 435 YRTVIAALCR--------------IGKMDDA--MEKFNQMIDQGVAPDKYAYNCLIQGFC 478

Query: 606 --------GQLVAEKAGQGKK----------ENRCR-QEILCILGVFQKMHKLKIKPNVV 646
                    +L++E    G             N C+   ++    +F     + + P+ V
Sbjct: 479 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 538

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQVYG------VAHGLLM-GY-RDNIWVQAL 698
            ++ +++        E A      LR+FD  V        V +G L+ GY +     + L
Sbjct: 539 VYNMLMDGYCLVGKMEKA------LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 592

Query: 699 SLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
           SLF E+       ++  Y+ + D L+  G+   A++
Sbjct: 593 SLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKM 628


>gi|227202654|dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
          Length = 815

 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 257/532 (48%), Gaps = 48/532 (9%)

Query: 183 VKREERKNDQGKLASAMISILGRLGKVDLAKNIFE-TALNEGYGNTVYAFSALISAYGRS 241
           V R  RKN        +I  L R G ++L  N+F+   + + Y      ++ +I  + R 
Sbjct: 102 VGRFARKN-----FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARH 156

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
            +  +A  +F  M++++ KP+  TY+A+I+A G+ G  ++  + + DDMLR  + P R T
Sbjct: 157 NWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG-QWRWAMNLMDDMLRAAIAPSRST 215

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           +N+L+  C   G W  A  +  +M   G+  D+ T+N +L A   G Q   A      M 
Sbjct: 216 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK 275

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM--KFLGIGLDRVSYNTVLSIYAKLGR 419
              + P+  T++ +I   +K G+   AL++F+ M  K      D V++ +++ +Y+  G 
Sbjct: 276 GAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE 335

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            E    V + M + G++ + V+YNAL+G Y   G       +   +K + + P++++Y+ 
Sbjct: 336 IENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 395

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           L++ Y +     +A ++F   ++   K +VV Y+ALIDA   NG +  AV +  +M ++G
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           I+PNVV+  +++ A  RS                 K+  N+D + S      Q  G   N
Sbjct: 456 IKPNVVSVCTLLAACSRS-----------------KKKVNVDTVLSA----AQSRGINLN 494

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
                     A  +  G   N    E+   + ++Q M K K+K + VTF+ +++   R +
Sbjct: 495 T--------AAYNSAIGSYINAA--ELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 544

Query: 660 SFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWV-QALSLFDEVKL 706
            + +A   L+E+         +VY     +L  Y     V +A S+F+++K+
Sbjct: 545 KYPEAISYLKEMEDLSIPLTKEVYS---SVLCAYSKQGQVTEAESIFNQMKM 593



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 133/537 (24%), Positives = 244/537 (45%), Gaps = 57/537 (10%)

Query: 148 KFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLG 207
           K +   C  +D   ++  L  R  W    +   F +++   K D  +   A+I+  GR G
Sbjct: 134 KIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPD-AETYDALINAHGRAG 192

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           +   A N+ +  L      +   ++ LI+A G SG  +EA+ V   M    + P+LVT+N
Sbjct: 193 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 252

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            V+ A  K G  +   +  F+ M    V+PD  TFN ++   S+ G    A +LFN M  
Sbjct: 253 IVLSAY-KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 311

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           +              A C+                    P+VVT+++++  Y+  G +++
Sbjct: 312 K-------------RAECR--------------------PDVVTFTSIMHLYSVKGEIEN 338

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
              +F  M   G+  + VSYN ++  YA  G    AL V  +++ +GI  D V+Y  LL 
Sbjct: 339 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 398

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
            YG+  +  + + +F  M+ +   PN++TY+ LID Y   G   EA++IFR+ +Q G+K 
Sbjct: 399 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 458

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           +VV    L+ A  ++    +  ++L      GI  N   YNS I ++  +A  E  +  +
Sbjct: 459 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI-AL 517

Query: 568 ERDLGKQKESAN-------LDAMC--SQDDKDVQEAGRTDNQII----KVFGQLVAEKAG 614
            + + K+K  A+       +   C  S+  + +      ++  I    +V+  ++   + 
Sbjct: 518 YQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSK 577

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           QG        ++     +F +M     +P+V+ ++++L+A +    +  A  LL E+
Sbjct: 578 QG--------QVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELLLEM 626



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 184/381 (48%), Gaps = 7/381 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNT---VYAFSALISAYGRSGYCQEAISVFNSMK 255
           +I  L +LG+   A ++F + + E        V  F++++  Y   G  +   +VF +M 
Sbjct: 289 IIYCLSKLGQSSQALDLFNS-MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 347

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              LKPN+V+YNA++ A    G+     + +  D+ +NG+ PD +++  LL    R    
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMS-GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A+ +F  M       ++ TYN L+DA      +  A EI  +M    I PNVV+  T+
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +   +++ +  +   + S  +  GI L+  +YN+ +  Y      E+A+ + + M    +
Sbjct: 467 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 526

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D+VT+  L+ G  +  KY E     ++M+   +      YS+++  YSK G   EA  
Sbjct: 527 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 586

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           IF + K AG + DV+ Y++++ A   +     A  LL EM   GI P+ +  ++++ AF 
Sbjct: 587 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELLLEMEANGIEPDSIACSALMRAFN 646

Query: 556 RSATTECTVDDVERDLGKQKE 576
           +          V  DL ++KE
Sbjct: 647 KGGQPSNVF--VLMDLMREKE 665



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 190/383 (49%), Gaps = 3/383 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCF-AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           +  ++  L   G+ S+A+  F +   KR E + D     S M  +    G+++  + +FE
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM-HLYSVKGEIENCRAVFE 344

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
             + EG    + +++AL+ AY   G    A+SV   +K+  + P++V+Y  ++++ G+  
Sbjct: 345 AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 404

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              K   E+F  M +   +P+ +T+N+L+      G    A  +F +M   GI  ++ + 
Sbjct: 405 QPGK-AKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 463

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TLL A  +  +      +++   ++ I+ N   Y++ I  Y  A  L+ A+ ++  M+ 
Sbjct: 464 CTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK 523

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             +  D V++  ++S   ++ ++ EA+   KEME   I      Y+++L  Y KQG+  E
Sbjct: 524 KKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTE 583

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +F QMK     P+++ Y++++  Y+    + +A ++  E +  G++ D +  SAL+ 
Sbjct: 584 AESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELLLEMEANGIEPDSIACSALMR 643

Query: 518 ALCKNGLVESAVSLLDEMTKEGI 540
           A  K G   +   L+D M ++ I
Sbjct: 644 AFNKGGQPSNVFVLMDLMREKEI 666



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 193/424 (45%), Gaps = 72/424 (16%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V +++ L+++YGRS    +A  VF  M++   KPN+VTYNA+IDA G  G      VEIF
Sbjct: 390 VVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF-LAEAVEIF 448

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
             M ++G++P+ ++  +LLA CSR         + +    RGI+ +   YN+ + +    
Sbjct: 449 RQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINA 508

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
           A+++ A  +   M  K +  + VT++ +I G  +  +  +A++   EM+ L I L +  Y
Sbjct: 509 AELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVY 568

Query: 408 NTVLSIYAKLGRFEEALLV--------------------------------CK---EMES 432
           ++VL  Y+K G+  EA  +                                C+   EME+
Sbjct: 569 SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELLLEMEA 628

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK---------------ADC-------- 469
           +GI  D++  +AL+  + K G+   V  + + M+               + C        
Sbjct: 629 NGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKR 688

Query: 470 -------VSPNLLTYST-----LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
                  + P L + S      ++ ++ K G  +  M++F +   +G+  ++  Y+ L++
Sbjct: 689 AIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLE 748

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            L   G     + +L+ M+  GI+P+   Y  II    RSA  E     + + LG+ +E 
Sbjct: 749 HLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIEFE-PLIRQKLGEMREE 807

Query: 578 ANLD 581
             ++
Sbjct: 808 CKIN 811



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/389 (19%), Positives = 156/389 (40%), Gaps = 69/389 (17%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +++  GR  +   AK +F     E     V  ++ALI AYG +G+  EA+ +F  M++
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453

Query: 257 YNLKPNLVTYNAVIDACGKG----------------------------------GVDFKH 282
             +KPN+V+   ++ AC +                                     + + 
Sbjct: 454 DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEK 513

Query: 283 VVEIFDDMLRNGVQPDRITF-----------------------------------NSLLA 307
            + ++  M +  V+ D +TF                                   +S+L 
Sbjct: 514 AIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLC 573

Query: 308 VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
             S+ G    A ++FN+M   G + D+  Y ++L A     +   A E++ EM A  I P
Sbjct: 574 AYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELLLEMEANGIEP 633

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           + +  S ++  + K G+  +   +   M+   I      +  + S    L  ++ A+ + 
Sbjct: 634 DSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLI 693

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           + M+           N +L  +GK GK + + ++F ++ A  V  NL TY+ L++     
Sbjct: 694 QMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAV 753

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALI 516
           G +++ +++      AG++    +Y  +I
Sbjct: 754 GNWRKYIEVLEWMSGAGIQPSNQMYRDII 782


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 256/528 (48%), Gaps = 61/528 (11%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD A ++F   L        + F+ ++ +  +S +    + +   M+   +KPNLV  N 
Sbjct: 66  VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL-LAVCSRGGLWEA--------- 317
           +I+  C  G + F     +F  +L+ G  PD ITF +L   +C +G + +A         
Sbjct: 126 LINCFCQLGLIPF--AFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVA 183

Query: 318 -------------------------ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
                                    A +L   +    +  ++  YNT++D++CK   ++ 
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           AF++ +EM +K ISP+VVTYS +I G+   G+L DA+++F++M    I  D  ++N +++
Sbjct: 244 AFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVN 303

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
            + K G+ +E   V   M   GI+ + VTYN+L+ GY    + ++ + +F  M    V+P
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           ++ +YS +I+ + K   + EAM +F+E  +  +  DVV YS+LID L K+G +  A+ L+
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESANLDAMCSQDDKD 590
           D+M   G+ PN+ TYNSI+DA  ++   +  +  +   +D G Q + +    +     K 
Sbjct: 424 DQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILI----KG 479

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ-------KMHKLKIKP 643
           + ++G+ ++   KVF  L+ +             +  C+ G+F        KM      P
Sbjct: 480 LCQSGKLEDA-RKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIP 538

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRD 691
           +  T+  I+ +  + +  + A  LL E+         +A GL + + D
Sbjct: 539 DAKTYEIIILSLFKKDENDMAEKLLREM---------IARGLPLNFYD 577



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 192/349 (55%), Gaps = 1/349 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I  + ++  V+ A ++F   +++G    V  +SALIS +   G  ++AI +FN M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
              N+KP++ T+N +++A  K G   K    +FD M++ G++P+ +T+NSL+        
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDG-KMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A+++FN M   G++ DI +Y+ +++  CK  + D A  +  EM  KNI P+VVTYS+
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDG +K+GR+  AL +  +M   G+  +  +YN++L    K  + ++A+ +  + +  G
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKG 465

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
            + D  TY+ L+ G  + GK ++ R++FE +     + ++  Y+ +I  +   GL+ EA+
Sbjct: 466 FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEAL 525

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            +  + +  G   D   Y  +I +L K    + A  LL EM   G+  N
Sbjct: 526 ALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLN 574



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 201/421 (47%), Gaps = 32/421 (7%)

Query: 251 FNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCS 310
           FN +   + K N ++Y++          D    V +F+ +LR    P    FN +L    
Sbjct: 38  FNFIPYSSSKINFISYSST-STTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLV 96

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           +   +     L  +M  RGI  ++   N L++  C+   +  AF + A++      P+ +
Sbjct: 97  KSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTI 156

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           T++T+  G    G++  A     ++  LG   D++SY T++    K+G    AL + + +
Sbjct: 157 TFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           + + ++ + V YN ++    K    +E   +F +M +  +SP+++TYS LI  +   G  
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKL 276

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           K+A+ +F +     +K DV  ++ L++A CK+G ++   ++ D M K+GI+PN VTYNS+
Sbjct: 277 KDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSL 336

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
           +D +       C V    +++ K K   N  A     + D+Q      N   K+      
Sbjct: 337 MDGY-------CLV----KEVNKAKSIFNTMAQ-GGVNPDIQSYSIMINGFCKI------ 378

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                 KK +         + +F++MH+  I P+VVT+S++++  S+      A  L+++
Sbjct: 379 ------KKFDEA-------MNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 671 L 671
           +
Sbjct: 426 M 426



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 211/456 (46%), Gaps = 25/456 (5%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           ++S+  + +  +    +A+S+FN + R N  P    +N ++ +  K    +  V+ +   
Sbjct: 52  SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSK-HYHTVLYLSQK 110

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G++P+ +  N L+    + GL   A ++F +++  G   D  T+ TL   +C   Q
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQ 170

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  AF    ++ A     + ++Y T+I G  K G    AL++   +    +  + V YNT
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    K+    EA  +  EM S GI  D VTY+AL+ G+   GK  +   +F +M  + 
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + P++ T++ L++ + K G  KE   +F    + G+K + V Y++L+D  C    V  A 
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL--DAMCSQD 587
           S+ + M + G+ P++ +Y+ +I+ F +         D   +L K+    N+  D +    
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKF-----DEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 588 DKD-VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ----EILC-------ILGVFQK 635
             D + ++GR    +     QLV +   +G   N C      + LC        + +  K
Sbjct: 406 LIDGLSKSGRISYAL-----QLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTK 460

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                 +P++ T+S ++    +    EDA  + E+L
Sbjct: 461 FKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDL 496


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 207/396 (52%), Gaps = 11/396 (2%)

Query: 160 TFLLRELGNRGEWSKAIQCF--AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           T L++ L  +G+  +A+Q      A+     K   G L +     L ++G+   A  +  
Sbjct: 146 TTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLING----LCKVGQTSAALQLLR 201

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKG 276
               +     V  ++ +I +  +     EA  +++ M    + P++VTYNA+I   C  G
Sbjct: 202 RVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVG 261

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            +  K   ++F+ M+   + P+  TFN L+   C    L EA +N+   M+ +GI  D+F
Sbjct: 262 KM--KDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEA-KNVLAMMMKQGIKPDVF 318

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYN+L+D  C   +++ A  I   +  + ++PN+ +YS MI G+ K  ++D+A+N+F EM
Sbjct: 319 TYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM 378

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
               I  D V+YN+++    KLG+   AL +  EM   G+  D +TYN++L    K  + 
Sbjct: 379 HCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQV 438

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D+   +  +MK + + P++ TY+TL+D   K G  ++A  +F +    G   DV +Y+A+
Sbjct: 439 DKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAM 498

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           I   C +GL + ++ LL +M + G  PN VTY  II
Sbjct: 499 IQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIII 534



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 195/367 (53%), Gaps = 1/367 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + S +I+   +LG+  L+ ++    L  GY   V   + LI      G   +A+   + +
Sbjct: 109 ILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKV 168

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
                  N V+Y  +I+   K G      +++   +    VQP+ + +N+++    +  L
Sbjct: 169 VALGFHLNKVSYGTLINGLCKVG-QTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKL 227

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A +L++EMV +GI  D+ TYN L+   C   +M  A ++  +M  +NI+PNV T++ 
Sbjct: 228 VNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNI 287

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++DG+ K  RL +A N+ + M   GI  D  +YN+++  Y  +    +A  +   +   G
Sbjct: 288 LVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRG 347

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  +  +Y+ ++ G+ K  K DE   +F++M  + + P+++TY++LID   K G    A+
Sbjct: 348 VNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYAL 407

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++  E    G+  D + Y++++DALCKN  V+ A++LL +M  EGI+P++ TY +++D  
Sbjct: 408 KLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGL 467

Query: 555 GRSATTE 561
            ++   E
Sbjct: 468 CKNGRLE 474



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 229/459 (49%), Gaps = 17/459 (3%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G  + +   S LI+ + + G    + SV   + +   +PN++T   +I   C KG +   
Sbjct: 102 GITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQI--H 159

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             ++  D ++  G   +++++ +L+    + G   AA  L   +  + +  ++  YNT++
Sbjct: 160 QALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTII 219

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           D++CK   ++ AF++ +EM +K ISP+VVTY+ +I G+   G++ DA ++F++M F  I 
Sbjct: 220 DSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENIN 279

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            +  ++N ++  + K  R +EA  V   M   GI+ D  TYN+L+  Y    + ++ + +
Sbjct: 280 PNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHI 339

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F  +    V+PN+ +YS +I  + K     EAM +F+E     +  DVV Y++LID LCK
Sbjct: 340 FNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCK 399

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
            G +  A+ L+DEM   G+  + +TYNSI+DA  ++      VD     L K K+     
Sbjct: 400 LGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQ----VDKAIALLTKMKDEGIQP 455

Query: 582 AMCSQDD--KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ----- 634
            +C+       + + GR ++  I VF  L+ +             +  C  G+F      
Sbjct: 456 DICTYTTLVDGLCKNGRLEDARI-VFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDL 514

Query: 635 --KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             KM +    PN VT+  I+ +    +  + A  LL E+
Sbjct: 515 LSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 209/414 (50%), Gaps = 15/414 (3%)

Query: 129 LHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREER 188
           +H    F    V+LG  L K          Y  L+  L   G+ S A+Q     ++R + 
Sbjct: 158 IHQALQFHDKVVALGFHLNKVS--------YGTLINGLCKVGQTSAALQ----LLRRVDG 205

Query: 189 KNDQGKLA--SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQE 246
           K  Q  +   + +I  + ++  V+ A +++   +++G    V  ++ALIS +   G  ++
Sbjct: 206 KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKD 265

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL 306
           A  +FN M   N+ PN+ T+N ++D   K     K    +   M++ G++PD  T+NSL+
Sbjct: 266 ATDLFNKMIFENINPNVYTFNILVDGFCKER-RLKEAKNVLAMMMKQGIKPDVFTYNSLM 324

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
                      A+++FN +  RG++ +I +Y+ ++   CK  ++D A  +  EM   NI 
Sbjct: 325 DRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNII 384

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P+VVTY+++IDG  K G++  AL +  EM   G+  D+++YN++L    K  + ++A+ +
Sbjct: 385 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIAL 444

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
             +M+  GI+ D  TY  L+ G  K G+ ++ R +FE +       ++  Y+ +I  +  
Sbjct: 445 LTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCS 504

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
            GL+ E++ +  + ++ G   + V Y  +I +L      + A  LL EM   G+
Sbjct: 505 HGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 210/404 (51%), Gaps = 18/404 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L   G++  A    +  +  G+     ++  LI+   + G    A+ +   +  
Sbjct: 146 TTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDG 205

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD---DMLRNGVQPDRITFNSLLAVCSRGG 313
             ++PN+V YN +ID+  K     K V E FD   +M+  G+ PD +T+N+L++     G
Sbjct: 206 KLVQPNVVMYNTIIDSMCK----VKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVG 261

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             + A +LFN+M+   I+ +++T+N L+D  CK  ++  A  ++A M  + I P+V TY+
Sbjct: 262 KMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYN 321

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           +++D Y     ++ A ++F+ +   G+  +  SY+ ++  + K+ + +EA+ + KEM  +
Sbjct: 322 SLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCN 381

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            I  D VTYN+L+ G  K GK     ++ ++M    V  + +TY++++D   K     +A
Sbjct: 382 NIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKA 441

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           + +  + K  G++ D+  Y+ L+D LCKNG +E A  + +++  +G   +V  Y ++I  
Sbjct: 442 IALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQG 501

Query: 554 FGRSATTECTVDDVERDLGKQKESANLD-------AMCSQDDKD 590
           F      + ++D     L K +E+  +         +CS  DKD
Sbjct: 502 FCSHGLFDESLD----LLSKMEENGCIPNAVTYEIIICSLFDKD 541



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 205/441 (46%), Gaps = 30/441 (6%)

Query: 248 ISVFNSM-KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL 306
           +S FN +  + N KP++  +  ++ +  K    +  VV +   M  NG+  D +  + L+
Sbjct: 56  VSSFNRLLHQKNPKPSIFQFGKILGSLVKSN-HYSTVVSLHRQMEFNGITSDLVILSILI 114

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
              S+ G    + ++  +++  G + ++ T  TL+  +C   Q+  A +   ++ A    
Sbjct: 115 NCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFH 174

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
            N V+Y T+I+G  K G+   AL +   +    +  + V YNT++    K+    EA  +
Sbjct: 175 LNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDL 234

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
             EM S GI  D VTYNAL+ G+   GK  +   +F +M  + ++PN+ T++ L+D + K
Sbjct: 235 YSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCK 294

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
               KEA  +     + G+K DV  Y++L+D  C    V  A  + + +++ G+ PN+ +
Sbjct: 295 ERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHS 354

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG 606
           Y+ +I  F       C +  V+  +   KE       C+    DV       + + K+  
Sbjct: 355 YSIMIHGF-------CKIKKVDEAMNLFKE-----MHCNNIIPDVVTYNSLIDGLCKLGK 402

Query: 607 -----QLVAEKAGQGKKENRCRQ----EILC-------ILGVFQKMHKLKIKPNVVTFSA 650
                +LV E   +G   ++       + LC        + +  KM    I+P++ T++ 
Sbjct: 403 ISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTT 462

Query: 651 ILNACSRCNSFEDASMLLEEL 671
           +++   +    EDA ++ E+L
Sbjct: 463 LVDGLCKNGRLEDARIVFEDL 483


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 200/400 (50%), Gaps = 36/400 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I    ++G+++ A+ I E  L+ G+     AF+ +I     +   + A+     M  
Sbjct: 457 NSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLL 516

Query: 257 YNLKPN-----------------------------------LVTYNAVIDACGKGGVDFK 281
            N++PN                                   LVT NA+I    K G + +
Sbjct: 517 RNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTG-NMQ 575

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             V +   ML  G   D+IT+N+L++ C + G  E    L  EMV +GI+ D FTYN L+
Sbjct: 576 EAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLI 635

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             +C+  ++D A  +  E  ++++ PNV TY  MIDGY KA ++++   +F+E+    + 
Sbjct: 636 HGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLE 695

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
           L+ V YNT++  Y + G   EA  +  +M S GI     TY++L+ G    G+ ++ + +
Sbjct: 696 LNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCL 755

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            ++M+ + + PN++ Y+ LI  Y K G   + + + +E     +  + + Y+ +ID   K
Sbjct: 756 IDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSK 815

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +G +++A  LL EM  +GI P+ VTYN + + F +    E
Sbjct: 816 SGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 855



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 233/504 (46%), Gaps = 48/504 (9%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           K  + ++S L +  +++ +  +FET + +G    VY FS  I+A+ + G  ++AI +F  
Sbjct: 280 KTCTFLLSSLVKANELEKSYWVFET-MRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFD 338

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M++  + PN+VTYN +I   C  G +D        + M+++GV    IT++ L+    + 
Sbjct: 339 MEKLGVSPNVVTYNNLIHGLCKHGNLD--EAFRFKEKMVKDGVNATLITYSVLINGLMKL 396

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
             +  A ++  E + +G   +   YNTL+D  CK   +  A  I  +M +K I+PN VT 
Sbjct: 397 EKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTL 456

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +++I G+ K G+++ A  +  EM   G  ++  ++ T++       RFE AL   +EM  
Sbjct: 457 NSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLL 516

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             +R +      L+GG  K+GK+ +   ++ ++       NL+T + LI    K G  +E
Sbjct: 517 RNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQE 576

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A+++ ++  + G   D + Y+ LI   CK G VE    L  EM K+GI P+  TYN +I 
Sbjct: 577 AVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIH 636

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD--KDVQEAGRTDNQIIKVFGQLVA 610
              R              +GK  E+ NL   C   D   +V   G      + + G   A
Sbjct: 637 GMCR--------------IGKLDEAVNLWNECKSRDLVPNVYTYG------VMIDGYCKA 676

Query: 611 EKAGQGKK---------------------ENRCRQ-EILCILGVFQKMHKLKIKPNVVTF 648
           +K  +G+K                        CR    +    +   M    I P   T+
Sbjct: 677 DKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATY 736

Query: 649 SAILNACSRCNSFEDASMLLEELR 672
           S++++        EDA  L++E+R
Sbjct: 737 SSLIHGMCNIGRMEDAKCLIDEMR 760



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 195/816 (23%), Positives = 339/816 (41%), Gaps = 160/816 (19%)

Query: 11  TATKPYQNHQYPHNHLKNNHHRQSHHPSSRPHWTSHKVSLTKPPLSPSPRNAP--KPAAT 68
           ++ +P+Q  +    HL +   +    P S  H  S  + +T  P  P+P   P  +P   
Sbjct: 35  SSQQPWQPRRRLQVHL-SMPSKPLKDPISCLH-QSMDLRITLLP-KPTPIFCPIARPLTC 91

Query: 69  STTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEA 128
            T+ AP+P      SPLPS     + D +  +S   +       P +  +    ++   +
Sbjct: 92  VTSAAPHPP-----SPLPSQNQPPSSDHALLKSVTSI----LSNPSLDSTQCKQLIPHLS 142

Query: 129 LHHVTAF---ARDDVSLGDILKKFEF--KLCG----ADDYTFLLRELGNRGEWSKAIQCF 179
            H   +     R +V+    L  F F    CG       Y  L+R L   G  S A    
Sbjct: 143 PHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLL 202

Query: 180 AFAVKRE------ERKNDQGKLASAMISI--LGRLG----KVDL---------------- 211
              + R+      + KN   ++ASAM  +  +G  G     VDL                
Sbjct: 203 IRLIDRKLPVLFGDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRN 262

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  +F    N+G   TV   + L+S+  ++   +++  VF +M R  + P++  ++  I+
Sbjct: 263 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAIN 321

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNE-MVHRG 329
           A  KGG   +  +++F DM + GV P+ +T+N+L+  +C  G L EA R  F E MV  G
Sbjct: 322 AFCKGG-KVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFR--FKEKMVKDG 378

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           ++  + TY+ L++ + K  + + A  ++ E   K  +PN V Y+T+IDGY K G L DAL
Sbjct: 379 VNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDAL 438

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG--------------- 434
            +  +M   GI  + V+ N+++  + K+G+ E+A  + +EM S G               
Sbjct: 439 RIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWL 498

Query: 435 --------------------IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
                               +R +      L+GG  K+GK+ +   ++ ++       NL
Sbjct: 499 CMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANL 558

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           +T + LI    K G  +EA+++ ++  + G   D + Y+ LI   CK G VE    L  E
Sbjct: 559 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 618

Query: 535 MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEA 594
           M K+GI P+  TYN +I    R              +GK  E+ NL   C   D      
Sbjct: 619 MVKQGIEPDTFTYNLLIHGMCR--------------IGKLDEAVNLWNECKSRD------ 658

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
                                                         + PNV T+  +++ 
Sbjct: 659 ----------------------------------------------LVPNVYTYGVMIDG 672

Query: 655 CSRCNSFEDASMLLEELRLFDNQVYGVAHG-LLMGY-RDNIWVQALSLFDEVKLMDSSTA 712
             + +  E+   L  EL   + ++  V +  L+  Y R+   V+A  L D+++       
Sbjct: 673 YCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPT 732

Query: 713 SAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENV 748
           +A Y++L   + + G+   A+ ++ E ++  +  NV
Sbjct: 733 TATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNV 768



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 192/376 (51%), Gaps = 3/376 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +T ++  L     +  A++     + R  R ND   L + ++  L + GK   A  ++  
Sbjct: 491 FTTIIHWLCMNSRFESALRFLREMLLRNMRPND--GLLTTLVGGLCKEGKHSDAVELWFR 548

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L +G+G  +   +ALI    ++G  QEA+ +   M       + +TYN +I  C K G 
Sbjct: 549 LLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEG- 607

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +   ++  +M++ G++PD  T+N L+    R G  + A NL+NE   R +  +++TY 
Sbjct: 608 KVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYG 667

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            ++D  CK  +++   ++  E+  +N+  N V Y+T+I  Y + G   +A  +  +M+  
Sbjct: 668 VMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSK 727

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI     +Y++++     +GR E+A  +  EM   G+  + V Y AL+GGY K G+ D+V
Sbjct: 728 GIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKV 787

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + ++M +  + PN +TY+ +ID YSK G  K A ++  E    G+  D V Y+ L + 
Sbjct: 788 VNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNG 847

Query: 519 LCKNGLVESAVSLLDE 534
            CK G +E    L ++
Sbjct: 848 FCKEGKIEEGKLLAED 863



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 225/485 (46%), Gaps = 21/485 (4%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L + G +D A    E  + +G   T+  +S LI+   +     EA SV        
Sbjct: 354 LIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKG 413

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             PN V YN +ID   K G +    + I  DM+  G+ P+ +T NS++    + G  E A
Sbjct: 414 FTPNEVVYNTLIDGYCKMG-NLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQA 472

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +  EM+ RG   +   + T++  +C  ++ + A   + EM  +N+ PN    +T++ G
Sbjct: 473 ECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGG 532

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K G+  DA+ ++  +   G G + V+ N ++    K G  +EA+ + K+M   G   D
Sbjct: 533 LCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLD 592

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            +TYN L+ G  K+GK +E  ++  +M    + P+  TY+ LI    + G   EA+ ++ 
Sbjct: 593 KITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWN 652

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E K   L  +V  Y  +ID  CK   +E    L  E+  + +  N V YN++I A+ R+ 
Sbjct: 653 ECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNG 712

Query: 559 TT--ECTVDDVERDLGKQKESAN----LDAMCS----QDDKDVQEAGRTDNQIIKV--FG 606
            T     + D  R  G    +A     +  MC+    +D K + +  R +  +  V  + 
Sbjct: 713 NTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYT 772

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            L+      G+ +         ++ V Q+M    I PN +T++ +++  S+    + A+ 
Sbjct: 773 ALIGGYCKLGQMDK--------VVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAK 824

Query: 667 LLEEL 671
           LL E+
Sbjct: 825 LLHEM 829


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 144/548 (26%), Positives = 253/548 (46%), Gaps = 54/548 (9%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            MI  LGR  ++D+ + I +    +G       F  +I+ Y R G  ++A+ +F  +  +
Sbjct: 79  VMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEF 138

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             KP +  YN ++DA       F+ +  ++ +M ++G+ P+  T+N LL    +    +A
Sbjct: 139 GCKPTVRIYNHLLDALLSEN-KFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDA 197

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  LF EM ++G   D  TY T++ ++CK  ++D A E+     A    P+V  Y+ +ID
Sbjct: 198 AHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNALID 252

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K GR++ A+ +  EM   G+  + VSY+ +++     G  E A  +  +M   G   
Sbjct: 253 GMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDA 312

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +  T+  L+ G   +GK  E   +++ M  D   PN++ Y+TLI      G  +EA+Q+ 
Sbjct: 313 NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVC 372

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            + +++G   +V  YS LID   K+G +  A    + M   G RPNVVTY  ++D   ++
Sbjct: 373 DQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKN 432

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
           +  +     VE+                     +   G T N +   F   +    G G+
Sbjct: 433 SMFDQANSLVEK---------------------MTLEGCTPNTM--TFNTFIKGLCGNGR 469

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE------- 670
            E          + + ++M      PN+ T++ +L+A  R N +E+A  L +E       
Sbjct: 470 VE--------WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQ 521

Query: 671 --LRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
             L  ++  +YG +   +MG       +AL LF +  +  ++  S  YN +       G+
Sbjct: 522 PNLVTYNTVLYGFSRAGMMG-------EALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574

Query: 729 -KRGAQLV 735
            K  AQLV
Sbjct: 575 VKIAAQLV 582



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 186/360 (51%), Gaps = 4/360 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+ L   G V+LA  +F      G    ++ F+ LI      G   EA+ ++  M +
Sbjct: 283 SCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQ 342

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              +PN+V YN +I   C  G ++    +++ D M R+G  P+  T++ L+   ++ G  
Sbjct: 343 DGCEPNVVAYNTLIHGLCSNGSLE--EALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDL 400

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A   +N M+  G   ++ TY  ++D +CK +  D A  ++ +M  +  +PN +T++T 
Sbjct: 401 VGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTF 460

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G    GR++ A+ +   M+  G   +  +YN +L    ++ ++EEA  + +E+E+  +
Sbjct: 461 IKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNL 520

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + VTYN +L G+ + G   E  ++F +      +P+ +TY+T+I  Y K G  K A Q
Sbjct: 521 QPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQ 580

Query: 496 IF-REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +  R         D++ Y++LI   C    +E A++ LD+   +GI PN  T+N+++  F
Sbjct: 581 LVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 190/375 (50%), Gaps = 10/375 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + M+S L + GK+D A+      L   +  +V  ++ALI    + G  + AI +   M  
Sbjct: 218 TTMVSSLCKAGKIDDARE-----LAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMD 272

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC-SRGGL 314
             + PN+V+Y+ +I++ C  G V+      +F  M   G   +  TF  L+  C  RG L
Sbjct: 273 NGVDPNVVSYSCIINSLCVSGNVELAFA--LFAQMFLRGCDANIHTFTPLIKGCFMRGKL 330

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           +EA  +L+  M+  G + ++  YNTL+  +C    ++ A ++  +M      PNV TYS 
Sbjct: 331 YEAL-DLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSI 389

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDG+AK+G L  A   ++ M   G   + V+Y  ++ +  K   F++A  + ++M   G
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG 449

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              + +T+N  + G    G+ +   ++ E+M+     PN+ TY+ L+D   +   Y+EA 
Sbjct: 450 CTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF 509

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +F+E +   L+ ++V Y+ ++    + G++  A+ L  +    G  P+ +TYN++I A+
Sbjct: 510 GLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAY 569

Query: 555 GRSATTECTVDDVER 569
            +    +     VER
Sbjct: 570 CKQGKVKIAAQLVER 584



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 190/357 (53%), Gaps = 4/357 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I  + + G++++A  +    ++ G    V ++S +I++   SG  + A ++F  M  
Sbjct: 248 NALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFL 307

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
                N+ T+  +I  C   G      ++++  M+++G +P+ + +N+L+  +CS G L 
Sbjct: 308 RGCDANIHTFTPLIKGCFMRG-KLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLE 366

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA + + ++M   G   ++ TY+ L+D   K   +  A E    M +    PNVVTY+ M
Sbjct: 367 EALQ-VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCM 425

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +D   K    D A ++  +M   G   + +++NT +      GR E A+ + + M+  G 
Sbjct: 426 VDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGC 485

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +  TYN LL    +  KY+E   +F++++A  + PNL+TY+T++  +S+ G+  EA+Q
Sbjct: 486 LPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQ 545

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK-EGIRPNVVTYNSII 551
           +F +    G   D + Y+ +I A CK G V+ A  L++ ++  +   P+++TY S+I
Sbjct: 546 LFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 602



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 5/226 (2%)

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TY  +++ + +  +MD+   I+ +M    I+     +  +I+GY + G  + AL MF  +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G       YN +L       +F+    +   M+  G+  +  TYN LL    K  + 
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D   ++F +M      P+ +TY+T++    K G   +A ++   FK +     V +Y+AL
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPS-----VPVYNAL 250

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           ID +CK G +E A+ LL EM   G+ PNVV+Y+ II++   S   E
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVE 296



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 147/354 (41%), Gaps = 27/354 (7%)

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           S+  +  A TY  ++   G++ + D V+ + +QMK D ++     +  +I+ Y + G  +
Sbjct: 67  SNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAE 126

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +A+++F    + G K  V +Y+ L+DAL      +    L   M K+G+ PNV TYN ++
Sbjct: 127 QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILL 186

Query: 552 DAFGRSATTECTVDDVER------DLGKQKESANLDAMCSQDDK-----DVQEAGRTDNQ 600
            A  ++      VD   +      + G   ++     M S   K     D +E       
Sbjct: 187 KALCKND----RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP 242

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
            + V+  L+     +G+ E   +     +LG   +M    + PNVV++S I+N+     +
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIK-----LLG---EMMDNGVDPNVVSYSCIINSLCVSGN 294

Query: 661 FEDASMLLEE--LRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAF-YN 717
            E A  L  +  LR  D  ++     +   +      +AL L+ ++ + D    +   YN
Sbjct: 295 VELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW-KLMIQDGCEPNVVAYN 353

Query: 718 ALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAW 771
            L   L   G    A  V  + +R     NV + S L      SG        W
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 192/354 (54%), Gaps = 7/354 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R G ++L        ++ G    V +++A++    + G    A ++ + +     KP+
Sbjct: 167 LKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPS 226

Query: 263 LVTYNAVIDACGKGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           ++TYN +++    G ++ K V    EI   M +N V  +  T+  L+   SR    E A 
Sbjct: 227 VITYNTLLN----GYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAE 282

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            LF+EM+ +GI+ D++ Y ++++  CK   M  AF +  EM  + + PN  TY  +I+G 
Sbjct: 283 KLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGA 342

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            KAG +  A  M ++M+  G+ ++RV +NT++  Y K G  +EAL +   M+  G   DA
Sbjct: 343 CKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDA 402

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
            T N +  G+ +  + +E +R+   M+   V+PN++++S LID+Y K   + EA ++F+ 
Sbjct: 403 FTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKV 462

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            ++ G    VV Y+A I+  CK G +E A  L++EM + G+ P+  TY S+ID 
Sbjct: 463 MEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 516



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 172/324 (53%), Gaps = 1/324 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  ++ LI  Y RS   +EA  +F+ M +  ++P++  Y ++I+   K G + K    +F
Sbjct: 262 VTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG-NMKRAFVLF 320

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           D+M    + P+  T+ +L+    + G  +AA  + N+M  +G+D +   +NTL+D  CK 
Sbjct: 321 DEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKK 380

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             +D A  +   M  K    +  T + +  G+ ++ R ++A  +   M+  G+  + VS+
Sbjct: 381 GMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSF 440

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           + ++ IY K   F EA  + K ME  G     VTYNA +  Y K+GK +E  ++  +M+ 
Sbjct: 441 SILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQE 500

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + P+  TY++LID     G    A+++F E  Q GL  +VV Y+ +I  L K+G  + 
Sbjct: 501 RGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADE 560

Query: 528 AVSLLDEMTKEGIRPNVVTYNSII 551
           A  L DEM KEGI P+   Y+S+I
Sbjct: 561 AFKLYDEMNKEGIVPDDGIYSSLI 584



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 177/341 (51%), Gaps = 4/341 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    R  K++ A+ +F+  L +G    VY ++++I+   + G  + A  +F+ M  
Sbjct: 266 TMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTE 325

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             L PN  TY A+I+   K G + K    + +DM   GV  +R+ FN+L+   C +G + 
Sbjct: 326 RRLVPNAYTYGALINGACKAG-EMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMID 384

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA R L N M  +G + D FT N +    C+  + + A  ++  M  + ++PNVV++S +
Sbjct: 385 EALR-LQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSIL 443

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID Y K     +A  +F  M+  G     V+YN  +  Y K G+ EEA  +  EM+  G+
Sbjct: 444 IDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGL 503

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  TY +L+ G    G  D    +F +M    ++ N++TY+ +I   SK G   EA +
Sbjct: 504 MPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFK 563

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNG-LVESAVSLLDEM 535
           ++ E  + G+  D  +YS+LI +L K G LV    +++D +
Sbjct: 564 LYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRI 604



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 198/441 (44%), Gaps = 59/441 (13%)

Query: 280 FKHVVEIFDDMLRNGVQPD-RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           F   +E+FD   + G + D R  F  LLA+  R G  E       +MV  GI+  + ++ 
Sbjct: 138 FDSSLEVFDYARKKGFEIDERSCFEFLLAL-KRSGNMELCVEFLRQMVDSGIEIRVCSWT 196

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG-------------------- 378
            ++D +CK  ++  A  +M E+  K   P+V+TY+T+++G                    
Sbjct: 197 AVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKN 256

Query: 379 ---------------YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
                          Y+++ ++++A  +F EM   GI  D   Y ++++   K G  + A
Sbjct: 257 VVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRA 316

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
            ++  EM    +  +A TY AL+ G  K G+      M   M++  V  N + ++TL+D 
Sbjct: 317 FVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDG 376

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y K G+  EA+++    +Q G + D    + +    C++   E A  LL  M + G+ PN
Sbjct: 377 YCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPN 436

Query: 544 VVTYNSIIDAFGRS---ATTECTVDDVERDLGKQKESANLDAMCSQDDK--DVQEAGRTD 598
           VV+++ +ID + +    A        +E+  GK       +A   +  K   ++EA +  
Sbjct: 437 VVSFSILIDIYCKEQNFAEARRLFKVMEKK-GKAPSVVTYNAFIERYCKKGKMEEAYKLI 495

Query: 599 NQIIK--------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
           N++ +         +  L+  +   G  +          L +F +M +L +  NVVT++ 
Sbjct: 496 NEMQERGLMPDTYTYTSLIDGERASGNVDR--------ALELFNEMPQLGLNRNVVTYTV 547

Query: 651 ILNACSRCNSFEDASMLLEEL 671
           I++  S+    ++A  L +E+
Sbjct: 548 IISGLSKDGRADEAFKLYDEM 568



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 172/387 (44%), Gaps = 45/387 (11%)

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           +VE F DML      +R+ F+S L V             F+    +G + D  +    L 
Sbjct: 120 IVEKFCDMLFRVYMDNRM-FDSSLEV-------------FDYARKKGFEIDERSCFEFLL 165

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A+ +   M+L  E + +M    I   V +++ ++DG  K G +  A  +  E+   G   
Sbjct: 166 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 225

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
             ++YNT+L+ Y ++        +   ME + +  +  TY  L+  Y +  K +E  ++F
Sbjct: 226 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLF 285

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           ++M    + P++  Y+++I+   K G  K A  +F E  +  L  +   Y ALI+  CK 
Sbjct: 286 DEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKA 345

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           G +++A  ++++M  +G+  N V +N+++D + +               G   E+  L  
Sbjct: 346 GEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKK--------------GMIDEALRLQN 391

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
           +  Q  K  +    T N I   F            + NR R+E   +L     M +  + 
Sbjct: 392 IMQQ--KGFEIDAFTCNIIASGFC-----------RSNR-REEAKRLL---LTMEERGVA 434

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLE 669
           PNVV+FS +++   +  +F +A  L +
Sbjct: 435 PNVVSFSILIDIYCKEQNFAEARRLFK 461


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 227/470 (48%), Gaps = 46/470 (9%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD A + F   L   +   +  F+ ++ ++ +  +   A+S+ + ++   ++P+L+T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           +I+  C  G + F     +   +L+ G  PD +T N+L+      G  + A +  ++++ 
Sbjct: 100 LINCFCHMGQITFG--FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           +G   +  +Y TL++ +CK      A + + ++  +   P+VV Y+T+ID   K   + +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +FSEM   GI  D V+YNT++  +  +G+ +EA+ +  EM    I  +  TYN L+ 
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
              K+GK  E + +   M   CV P+++TYSTL+D Y      K+A  +F      G+  
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD-- 565
           DV  Y+ LI+  CKN +V+ A++L  EM ++ + P +VTY+S+ID   +S       D  
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLI 397

Query: 566 DVERDLGKQKE----SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
           D  RD G+  +    S+ +D +C          G  D  I                    
Sbjct: 398 DEMRDRGQPADVITYSSLIDGLCKN--------GHLDRAI-------------------- 429

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                     +F KM   +I+PN+ TF+ +L+   +    +DA  + ++L
Sbjct: 430 ---------ALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 193/387 (49%), Gaps = 44/387 (11%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V  A +  +  L +G+     +++ LI+   + G  + AI     +     KP++V Y
Sbjct: 143 GQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMY 202

Query: 267 NAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
           N +IDA  K    ++ V E   +F +M   G+  D +T+N+L+   C  G L EA   L 
Sbjct: 203 NTIIDAMCK----YQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAI-GLL 257

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY--- 379
           NEMV + I+ +++TYN L+DA+CK  ++  A  ++A M    + P+V+TYST++DGY   
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLV 317

Query: 380 --------------------------------AKAGRLDDALNMFSEMKFLGIGLDRVSY 407
                                            K   +D+ALN+F EM    +    V+Y
Sbjct: 318 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           ++++    K GR      +  EM   G   D +TY++L+ G  K G  D    +F +MK 
Sbjct: 378 SSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD 437

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + PN+ T++ L+D   KGG  K+A ++F++    G   +V  Y+ +I+  CK GL+E 
Sbjct: 438 QEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 497

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           A+++L +M   G  PN  T+ +II A 
Sbjct: 498 ALTMLSKMEDNGCIPNAFTFETIIIAL 524



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 187/374 (50%), Gaps = 3/374 (0%)

Query: 185 REERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSG 242
           R E K  Q  L +   +I+    +G++    ++    L  GY       + LI      G
Sbjct: 84  RLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKG 143

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
             ++A+   + +     + N V+Y  +I+   K G D +  ++    +     +PD + +
Sbjct: 144 QVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG-DTRAAIKFLRKIDGRLTKPDVVMY 202

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           N+++    +  L   A  LF+EM  +GI  D+ TYNTL+   C   ++  A  ++ EM  
Sbjct: 203 NTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVL 262

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
           K I+PNV TY+ ++D   K G++ +A ++ + M    +  D ++Y+T++  Y  +   ++
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKK 322

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A  V   M   G+  D  TY  L+ G+ K    DE   +F++M    + P ++TYS+LID
Sbjct: 323 AQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
              K G       +  E +  G  ADV+ YS+LID LCKNG ++ A++L ++M  + IRP
Sbjct: 383 GLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRP 442

Query: 543 NVVTYNSIIDAFGR 556
           N+ T+  ++D   +
Sbjct: 443 NIFTFTILLDGLCK 456



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 176/347 (50%), Gaps = 3/347 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I  + +   V  A  +F     +G    V  ++ LI  +   G  +EAI + N M
Sbjct: 201 MYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEM 260

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
               + PN+ TYN ++DA C +G V  K    +   ML+  V+PD IT+++L+       
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKV--KEAKSVLAVMLKACVKPDVITYSTLMDGYFLVY 318

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             + A+++FN M   G+  D+ TY  L++  CK   +D A  +  EM  KN+ P +VTYS
Sbjct: 319 EVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYS 378

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           ++IDG  K+GR+    ++  EM+  G   D ++Y++++    K G  + A+ +  +M+  
Sbjct: 379 SLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            IR +  T+  LL G  K G+  + + +F+ +       N+ TY+ +I+ + K GL +EA
Sbjct: 439 EIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEA 498

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           + +  + +  G   +   +  +I AL K    + A  LL +M   G+
Sbjct: 499 LTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 243/487 (49%), Gaps = 26/487 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  L ++ +++ A       +++G+   VY ++A+I A        EA      M  
Sbjct: 15  TSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMAN 74

Query: 257 YNLKPNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            NL PN+VTY  +ID   KGG VD    V +   M R    P  +T+NSL++   +    
Sbjct: 75  RNLTPNVVTYTVLIDGLCKGGRVD--EAVALLSKM-RKKCVPTAVTYNSLISGLCKAERA 131

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A +L  EMV+ G   DIFTY TL+   CK  + D A  +  ++ A+   P+VVTYS +
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGL-DRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           IDG  K GRL +A+++F  M   G  + + V+YN+++S + ++G+ +EA+ + + M  +G
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D VTY  L+ G+ K  + D+   +  QM    ++P+++T+++L+D   +     +A+
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 495 QIFREFKQAGLKADVVLYSALIDALCK-NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            I  E ++      V  Y+ ++D  C+ N L E+   +L+EM      PNVV++N +I  
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIMIRG 368

Query: 554 FGRSATTECTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
             +   +   ++ VE    ++        +  +D +C +  K V EA R   ++++  G 
Sbjct: 369 LCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCRE--KKVDEACRVYRKMLEEPGC 426

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK---PNVVTFSAILNACSRCNSFEDA 664
           L                  LC  G+  +      K   PN+ T++ +++A  + N  EDA
Sbjct: 427 LPNSITYSTLVTG------LCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDA 480

Query: 665 SMLLEEL 671
             LL+++
Sbjct: 481 RELLDDM 487



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 216/406 (53%), Gaps = 14/406 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L   G   +A+   A   K  ++        +++IS L +  +   A ++ E 
Sbjct: 84  YTVLIDGLCKGGRVDEAV---ALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEE 140

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +  G    ++ ++ LI+ + +S    +A+ VF  +     +P++VTY+ +ID   K G 
Sbjct: 141 MVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG- 199

Query: 279 DFKHVVEIFDDMLRNG-VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             K  +++F  M+++G   P+ +T+NSL++   R G  + A NL   M   G   D+ TY
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TL++  CK A++D A++++ +M  K ++P+VVT+++++DG  +  RL DA+++  EM+ 
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR 319

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEAL-LVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
                   +YNT+L  Y +  + EEA   + +EM+      + V++N ++ G  K  +  
Sbjct: 320 KSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP---PNVVSFNIMIRGLCKVNRSS 376

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE-FKQAGLKADVVLYSAL 515
           E   + E+ +    +P+++ Y+T+ID   +     EA +++R+  ++ G   + + YS L
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +  LC  G+++ A   ++    +G  PN+ TYN +IDAF ++   E
Sbjct: 437 VTGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDE 478



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 206/413 (49%), Gaps = 38/413 (9%)

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARN 320
           + VTY ++I    K     +  +     M+  G  PD  T+ +++ A+C    L EA R 
Sbjct: 10  DFVTYTSLIQGLCKVK-RLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA-RK 67

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
              EM +R +  ++ TY  L+D +CKG ++D A  ++++M  K + P  VTY+++I G  
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLC 126

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           KA R  +A ++  EM + G   D  +Y T+++ + K  + ++AL V +++ + G R D V
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           TY+ L+ G  K+G+  E   +F +M K+    PN +TY++LI  + + G   EAM +   
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             + G   DVV Y+ L++  CK   ++ A  LL++MT++G+ P+VVT+ S++D   R   
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR--- 303

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
            E  + D    LG+ +             K       T N I+   G   A +  + +K 
Sbjct: 304 -ENRLSDAVHILGEMRR------------KSCSPTVYTYNTILD--GYCRANQLEEARK- 347

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                        F  + ++   PNVV+F+ ++    + N   +A  L+EE R
Sbjct: 348 -------------FM-LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEAR 386



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 179/334 (53%), Gaps = 5/334 (1%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
            +++LI    +    ++A+     M      P++ TY AVI A C +         +  +
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN--RLHEARKFLE 70

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +M    + P+ +T+  L+    +GG  + A  L ++M  + +   + TYN+L+  +CK  
Sbjct: 71  EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYNSLISGLCKAE 129

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +   A++++ EM      P++ TY+T+I G+ K+ + DDAL +F ++   G   D V+Y+
Sbjct: 130 RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189

Query: 409 TVLSIYAKLGRFEEAL-LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
            ++    K GR +EA+ L  + ++S     + VTYN+L+ G+ + GK DE   + E+M  
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
              SP+++TY+TL++ + K     +A  +  +  + GL  DVV +++L+D LC+   +  
Sbjct: 250 TGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSD 309

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           AV +L EM ++   P V TYN+I+D + R+   E
Sbjct: 310 AVHILGEMRRKSCSPTVYTYNTILDGYCRANQLE 343



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 214/437 (48%), Gaps = 39/437 (8%)

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
           N    D +T+ SL+    +    E A     +MV +G   D++TY  ++ A+C   ++  
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A + + EM  +N++PNVVTY+ +IDG  K GR+D+A+ + S+M+   +    V+YN+++S
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLIS 123

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              K  R  EA  + +EM  SG   D  TY  L+ G+ K  K D+  R+FEQ+ A    P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIF-REFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           +++TYS LID   K G  KEA+ +F R  K      + V Y++LI   C+ G ++ A++L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
           L+ M + G  P+VVTY ++++ F + A     +DD   DL  Q                +
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLA----RLDDA-YDLLNQ----------------M 282

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
              G T + +   F  L+        +ENR    +  ILG   +M +    P V T++ I
Sbjct: 283 TRKGLTPDVV--TFTSLMDGLC----RENRLSDAVH-ILG---EMRRKSCSPTVYTYNTI 332

Query: 652 LNACSRCNSFEDA-SMLLEELRLFDNQVYG--VAHGLLMGYRDNIWVQALSLFDEVKLMD 708
           L+   R N  E+A   +LEE+    N V    +  GL    R +   +A+ L +E +   
Sbjct: 333 LDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSS---EAMELVEEARRRR 389

Query: 709 SSTASAFYNALTDMLWH 725
            +     Y  + D L  
Sbjct: 390 CNPDVVMYTTVIDGLCR 406



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 117/309 (37%), Gaps = 67/309 (21%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L   G   +AI  F   +K      +     S +IS   R+GK+D A N+ E 
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNS-LISGFCRMGKMDEAMNLLER 246

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G    V  ++ L++ + +     +A  + N M R  L P++VT+ +++D   +   
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN- 305

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL-------------FNEM 325
                V I  +M R    P   T+N++L    R    E AR               FN M
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIM 365

Query: 326 VH--------------------RGIDQDIFTYNTLLDAICKGAQMDLAFEI---MAEMPA 362
           +                     R  + D+  Y T++D +C+  ++D A  +   M E P 
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPG 425

Query: 363 -----------------------------KNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
                                        K   PN+ TY+ +ID + KA R +DA  +  
Sbjct: 426 CLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLD 485

Query: 394 EMKFLGIGL 402
           +M   G G+
Sbjct: 486 DMVQRGFGV 494


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 179/331 (54%), Gaps = 7/331 (2%)

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH---VVEIFDDM 290
           +++A    G   EA+ +   +  +  + ++V+YNAV+    KG    K    V E+ D+M
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVL----KGLCMAKRWGDVEELMDEM 242

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           +R    P+ +TFN+L+    R GL+E    +  +M   G   DI  Y T++D ICK   +
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           ++A EI+  MP+  + PNVV Y+T++ G   A R  +A  + SEM      LD V++N +
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +  + + G  +  + + ++M S G   D +TY  ++ G+ K+G  DE   + + M +   
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            PN ++Y+ ++      G + +A ++  +  Q G   + V ++ LI+ LCK GLVE A+ 
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           LL +M   G  P++++Y+++ID  G++  TE
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 192/413 (46%), Gaps = 5/413 (1%)

Query: 145 ILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +L+K  F  C AD   Y  +L+ L     W    +     V+ +   N      + +I  
Sbjct: 203 LLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT--FNTLIGY 260

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R G  +    +       G    +  ++ +I    + G+ + A  + N M  Y LKPN
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           +V YN V+         +K   E+  +M +     D +TFN L+    + GL +    L 
Sbjct: 321 VVCYNTVLKGLCSAE-RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            +M+  G   D+ TY T+++  CK   +D A  ++  M +    PN V+Y+ ++ G   A
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           GR  DA  + S+M   G   + V++NT+++   K G  E+A+ + K+M  +G   D ++Y
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           + ++ G GK GK +E   +   M    +SPN + YS++    S+ G   + +Q+F   K 
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
             +++D VLY+A+I +LCK    + A+     M   G  PN  TY  +I    
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLA 612



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 179/366 (48%), Gaps = 3/366 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++  A  + +    +G       +  ++ A  RSG  + ++ V  +M       +    
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNC 184

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N V++A C +G VD    V +   +   G + D +++N++L        W     L +EM
Sbjct: 185 NLVLNAICEQGCVD--EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V      +I T+NTL+  +C+    +   E++A+M     +P++  Y+T+IDG  K G L
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           + A  + + M   G+  + V YNTVL       R++EA  +  EM       D VT+N L
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +  + + G  D V  + EQM +    P+++TY+T+I+ + K GL  EA+ + +     G 
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           K + V Y+ ++  LC  G    A  L+ +M ++G  PN VT+N++I+   +    E  ++
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 566 DVERDL 571
            +++ L
Sbjct: 483 LLKQML 488



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/401 (21%), Positives = 188/401 (46%), Gaps = 35/401 (8%)

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  + +T+  ++  +C   ++  A E++ EM  K  +P    Y  +++   ++G   +++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            +   M   G  LD  + N VL+   + G  +EA+ + +++   G   D V+YNA+L G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 450 GKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
               ++ +V  + ++M + DC +PN++T++TLI    + GL++   ++  +  + G   D
Sbjct: 227 CMAKRWGDVEELMDEMVRVDC-APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
           + +Y+ +ID +CK G +E A  +L+ M   G++PNVV YN+++          C+ +   
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL-------CSAE--- 335

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
               + KE+  L +   Q D  + +   T N ++  F Q        G  +         
Sbjct: 336 ----RWKEAEELLSEMFQKDCPLDDV--TFNILVDFFCQ-------NGLVDR-------- 374

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
           ++ + ++M      P+V+T++ ++N   +    ++A MLL+ +     +   V++ +++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 689 --YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
                  WV A  L  ++           +N L + L   G
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG 475



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 109/487 (22%), Positives = 207/487 (42%), Gaps = 75/487 (15%)

Query: 295 VQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           V P+  TF  ++  +C+RG + +A   + +EM  +G       Y+ +L+A C+      +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALE-VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNS 165

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             ++  M AK  + +    + +++   + G +D+A+ +  ++ F G   D VSYN VL  
Sbjct: 166 VRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
                R+ +   +  EM       + VT+N L+G   + G ++ V  +  QM     +P+
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA------------------- 514
           +  Y+T+ID   K G  + A +I       GLK +VV Y+                    
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 515 ----------------LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
                           L+D  C+NGLV+  + LL++M   G  P+V+TY ++I+ F +  
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 559 TTECTVDDVE--RDLGKQKESAN----LDAMCSQDDKDVQEAGR-TDNQIIKVFGQLVAE 611
             +  V  ++     G +  + +    L  +CS        AGR  D +  ++  Q++ +
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS--------AGRWVDAE--ELMSQMIQQ 455

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKL-------KIKPNVVTFSAILNACSRCNSFEDA 664
                          LC  G+ ++  +L          P+++++S +++   +    E+A
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515

Query: 665 SMLLEELRLFDNQ-------VY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFY 716
              LE L +  N+       +Y  +A  L    R N  +Q   +FD +K     + +  Y
Sbjct: 516 ---LELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ---MFDNIKDTTIRSDAVLY 569

Query: 717 NALTDML 723
           NA+   L
Sbjct: 570 NAVISSL 576


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 207/405 (51%), Gaps = 18/405 (4%)

Query: 163 LRELGNRGEWSKAIQCFAFAVKREERKNDQGKL-----ASAMISILGRLGKVDLAKNIFE 217
           LR+L   GE  + ++         ER   QG +      +++I    R GK   A  I E
Sbjct: 113 LRKLVRNGELEEGLKFL-------ERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIME 165

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
              N G    V  ++ LI  Y +SG   +A+ V   ++R ++ P++VTYN ++ +    G
Sbjct: 166 ILENSGAVPDVITYNVLIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSG 222

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
              K  +E+ D  L+    PD IT+  L+ A C+  G+ +A + L +EM  +G   D+ T
Sbjct: 223 -KLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMK-LLDEMRKKGCKPDVVT 280

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN L++ ICK  ++D A + +  MP+    PNV+T++ ++      GR  DA  + S+M 
Sbjct: 281 YNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDML 340

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G     V++N +++   +      A+ V ++M   G   ++++YN LL G+ ++ K D
Sbjct: 341 RKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMD 400

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
                 E M +    P+++TY+TL+    K G    A++I  +    G    ++ Y+ +I
Sbjct: 401 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVI 460

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           D L K G  E AV LL+EM ++G++P+++TY++++   GR    +
Sbjct: 461 DGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVD 505



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 219/452 (48%), Gaps = 39/452 (8%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R G+++      E  + +G    V A ++LI  + RSG  ++A  +   ++     P+
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARN 320
           ++TYN +I   C  G +D    +E+ + M    V PD +T+N++L ++C  G L EA   
Sbjct: 176 VITYNVLIGGYCKSGEID--KALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAM-E 229

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           + +  + R    D+ TY  L++A C  + +  A +++ EM  K   P+VVTY+ +I+G  
Sbjct: 230 VLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 289

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K GRLD+A+   + M   G   + +++N +L      GR+ +A  +  +M   G     V
Sbjct: 290 KEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVV 349

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           T+N L+    ++        + E+M      PN L+Y+ L+  + +      A++     
Sbjct: 350 TFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 409

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
              G   D+V Y+ L+ ALCK+G V++AV +L++++ +G  P ++TYN++ID   +   T
Sbjct: 410 VSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKT 469

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
           E  V+ +E                     +++  G   + I   +  L+     +GK + 
Sbjct: 470 EYAVELLE---------------------EMRRKGLKPDII--TYSTLLRGLGREGKVDE 506

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
                    + +F  M  L IKP+ VT++AI+
Sbjct: 507 --------AIKIFHDMEGLSIKPSAVTYNAIM 530



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 179/350 (51%), Gaps = 3/350 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A  + +  L       V  ++ LI A        +A+ + + M++   KP++VTY
Sbjct: 222 GKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 281

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +I+  C +G +D    ++  ++M   G +P+ IT N +L      G W  A  L ++M
Sbjct: 282 NVLINGICKEGRLD--EAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDM 339

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           + +G    + T+N L++ +C+   +  A +++ +MP     PN ++Y+ ++ G+ +  ++
Sbjct: 340 LRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKM 399

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D A+     M   G   D V+YNT+L+   K G+ + A+ +  ++ S G     +TYN +
Sbjct: 400 DRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTV 459

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K GK +    + E+M+   + P+++TYSTL+    + G   EA++IF + +   +
Sbjct: 460 IDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSI 519

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           K   V Y+A++  LCK      A+  L  M ++G +P   TY  +I+   
Sbjct: 520 KPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIA 569



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 177/362 (48%), Gaps = 5/362 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +LR L + G+  +A++     ++RE   +      + +I        V  A  + + 
Sbjct: 211 YNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVI--TYTILIEATCNDSGVGQAMKLLDE 268

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
              +G    V  ++ LI+   + G   EAI   N+M  Y  KPN++T+N ++ + C  G 
Sbjct: 269 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTG- 327

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             +     +  DMLR G  P  +TFN L+    R  L   A ++  +M   G   +  +Y
Sbjct: 328 -RWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSY 386

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N LL   C+  +MD A E +  M ++   P++VTY+T++    K G++D A+ + +++  
Sbjct: 387 NPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSS 446

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G     ++YNTV+    K+G+ E A+ + +EM   G++ D +TY+ LL G G++GK DE
Sbjct: 447 KGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDE 506

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             ++F  M+   + P+ +TY+ ++    K      A+       + G K     Y+ LI+
Sbjct: 507 AIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIE 566

Query: 518 AL 519
            +
Sbjct: 567 GI 568



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/421 (21%), Positives = 194/421 (46%), Gaps = 23/421 (5%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           + +  ++  + M+  G  PD I   SL+    R G  + A  +   + + G   D+ TYN
Sbjct: 121 ELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYN 180

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+   CK  ++D A E++  M   +++P+VVTY+T++     +G+L +A+ +       
Sbjct: 181 VLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQR 237

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
               D ++Y  ++          +A+ +  EM   G + D VTYN L+ G  K+G+ DE 
Sbjct: 238 ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEA 297

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            +    M +    PN++T++ ++      G + +A ++  +  + G    VV ++ LI+ 
Sbjct: 298 IKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINF 357

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ---- 574
           LC+  L+  A+ +L++M K G  PN ++YN ++  F +    +  ++ +E  + +     
Sbjct: 358 LCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPD 417

Query: 575 --KESANLDAMCSQDDKDV------QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
               +  L A+C     D       Q + +  + ++  +  ++      GK E       
Sbjct: 418 IVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEY------ 471

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
              + + ++M +  +KP+++T+S +L    R    ++A  +  ++     +   V +  +
Sbjct: 472 --AVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAI 529

Query: 687 M 687
           M
Sbjct: 530 M 530



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 191/424 (45%), Gaps = 40/424 (9%)

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
           F  N  L  + +  +++   + +  M  +   P+V+  +++I G+ ++G+   A  +   
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           ++  G   D ++YN ++  Y K G  ++AL V   +E   +  D VTYN +L      GK
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGK 223

Query: 455 YDEVRRMFE-QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
             E   + + Q++ +C  P+++TY+ LI+         +AM++  E ++ G K DVV Y+
Sbjct: 224 LKEAMEVLDRQLQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 282

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            LI+ +CK G ++ A+  L+ M   G +PNV+T+N I+    RS  +     D ER L  
Sbjct: 283 VLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIIL----RSMCSTGRWMDAERLL-- 336

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC-ILGV 632
              S  L   CS        +  T N +I                   CR+ +L   + V
Sbjct: 337 ---SDMLRKGCSP-------SVVTFNILINFL----------------CRKRLLGRAIDV 370

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YR 690
            +KM K    PN ++++ +L+   +    + A   LE +         V +  L+    +
Sbjct: 371 LEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCK 430

Query: 691 DNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
           D     A+ + +++     S     YN + D L   G+   A  ++ E +R+ +  ++ +
Sbjct: 431 DGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIIT 490

Query: 751 ESCL 754
            S L
Sbjct: 491 YSTL 494


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 243/487 (49%), Gaps = 26/487 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  L ++ +++ A       +++G+   VY ++A+I A        EA      M  
Sbjct: 15  TSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMAN 74

Query: 257 YNLKPNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            NL PN+VTY  +ID   KGG VD    V +   M R    P  +T+NSL++   +    
Sbjct: 75  RNLTPNVVTYTVLIDGLCKGGRVD--EAVALLSKM-RKKCVPTAVTYNSLISGLCKAERA 131

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A +L  EMV+ G   DIFTY TL+   CK  + D A  +  ++ A+   P+VVTYS +
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGL-DRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           IDG  K GRL +A+++F  M   G  + + V+YN+++S + ++G+ +EA+ + + M  +G
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D VTY  L+ G+ K  + D+   +  QM    ++P+++T+++L+D   +     +A+
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 495 QIFREFKQAGLKADVVLYSALIDALCK-NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            I  E ++      V  Y+ ++D  C+ N L E+   +L+EM      PNVV++N +I  
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIMIRG 368

Query: 554 FGRSATTECTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
             +   +   ++ VE    ++        +  +D +C +  K V EA R   ++++  G 
Sbjct: 369 LCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCRE--KKVDEACRVYRKMLEEPGC 426

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK---PNVVTFSAILNACSRCNSFEDA 664
           L                  LC  G+  +      K   PN+ T++ +++A  + N  EDA
Sbjct: 427 LPNSITYSTLITG------LCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDA 480

Query: 665 SMLLEEL 671
             LL+++
Sbjct: 481 RELLDDM 487



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 216/406 (53%), Gaps = 14/406 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L   G   +A+   A   K  ++        +++IS L +  +   A ++ E 
Sbjct: 84  YTVLIDGLCKGGRVDEAV---ALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEE 140

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +  G    ++ ++ LI+ + +S    +A+ VF  +     +P++VTY+ +ID   K G 
Sbjct: 141 MVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG- 199

Query: 279 DFKHVVEIFDDMLRNG-VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             K  +++F  M+++G   P+ +T+NSL++   R G  + A NL   M   G   D+ TY
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TL++  CK A++D A++++ +M  K ++P+VVT+++++DG  +  RL DA+++  EM+ 
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR 319

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEAL-LVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
                   +YNT+L  Y +  + EEA   + +EM+      + V++N ++ G  K  +  
Sbjct: 320 KSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP---PNVVSFNIMIRGLCKVNRSS 376

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE-FKQAGLKADVVLYSAL 515
           E   + E+ +    +P+++ Y+T+ID   +     EA +++R+  ++ G   + + YS L
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           I  LC  G+++ A   ++    +G  PN+ TYN +IDAF ++   E
Sbjct: 437 ITGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDE 478



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 206/413 (49%), Gaps = 38/413 (9%)

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARN 320
           + VTY ++I    K     +  +     M+  G  PD  T+ +++ A+C    L EA R 
Sbjct: 10  DFVTYTSLIQGLCKVK-RLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA-RK 67

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
              EM +R +  ++ TY  L+D +CKG ++D A  ++++M  K + P  VTY+++I G  
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLC 126

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           KA R  +A ++  EM + G   D  +Y T+++ + K  + ++AL V +++ + G R D V
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           TY+ L+ G  K+G+  E   +F +M K+    PN +TY++LI  + + G   EAM +   
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             + G   DVV Y+ L++  CK   ++ A  LL++MT++G+ P+VVT+ S++D   R   
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR--- 303

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
            E  + D    LG+ +             K       T N I+   G   A +  + +K 
Sbjct: 304 -ENRLSDAVHILGEMRR------------KSCSPTVYTYNTILD--GYCRANQLEEARK- 347

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                        F  + ++   PNVV+F+ ++    + N   +A  L+EE R
Sbjct: 348 -------------FM-LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEAR 386



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 179/334 (53%), Gaps = 5/334 (1%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
            +++LI    +    ++A+     M      P++ TY AVI A C +         +  +
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN--RLHEARKFLE 70

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +M    + P+ +T+  L+    +GG  + A  L ++M  + +   + TYN+L+  +CK  
Sbjct: 71  EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYNSLISGLCKAE 129

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +   A++++ EM      P++ TY+T+I G+ K+ + DDAL +F ++   G   D V+Y+
Sbjct: 130 RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189

Query: 409 TVLSIYAKLGRFEEAL-LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
            ++    K GR +EA+ L  + ++S     + VTYN+L+ G+ + GK DE   + E+M  
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
              SP+++TY+TL++ + K     +A  +  +  + GL  DVV +++L+D LC+   +  
Sbjct: 250 TGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSD 309

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           AV +L EM ++   P V TYN+I+D + R+   E
Sbjct: 310 AVHILGEMRRKSCSPTVYTYNTILDGYCRANQLE 343



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 214/437 (48%), Gaps = 39/437 (8%)

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
           N    D +T+ SL+    +    E A     +MV +G   D++TY  ++ A+C   ++  
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A + + EM  +N++PNVVTY+ +IDG  K GR+D+A+ + S+M+   +    V+YN+++S
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLIS 123

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              K  R  EA  + +EM  SG   D  TY  L+ G+ K  K D+  R+FEQ+ A    P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIF-REFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           +++TYS LID   K G  KEA+ +F R  K      + V Y++LI   C+ G ++ A++L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
           L+ M + G  P+VVTY ++++ F + A     +DD   DL  Q                +
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLA----RLDDA-YDLLNQ----------------M 282

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
              G T + +   F  L+        +ENR    +  ILG   +M +    P V T++ I
Sbjct: 283 TRKGLTPDVV--TFTSLMDGLC----RENRLSDAVH-ILG---EMRRKSCSPTVYTYNTI 332

Query: 652 LNACSRCNSFEDA-SMLLEELRLFDNQVYG--VAHGLLMGYRDNIWVQALSLFDEVKLMD 708
           L+   R N  E+A   +LEE+    N V    +  GL    R +   +A+ L +E +   
Sbjct: 333 LDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSS---EAMELVEEARRRR 389

Query: 709 SSTASAFYNALTDMLWH 725
            +     Y  + D L  
Sbjct: 390 CNPDVVMYTTVIDGLCR 406



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 116/308 (37%), Gaps = 67/308 (21%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L   G   +AI  F   +K      +     S +IS   R+GK+D A N+ E 
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNS-LISGFCRMGKMDEAMNLLER 246

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G    V  ++ L++ + +     +A  + N M R  L P++VT+ +++D   +   
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN- 305

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL-------------FNEM 325
                V I  +M R    P   T+N++L    R    E AR               FN M
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIM 365

Query: 326 VH--------------------RGIDQDIFTYNTLLDAICKGAQMDLAFEI---MAEMPA 362
           +                     R  + D+  Y T++D +C+  ++D A  +   M E P 
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPG 425

Query: 363 -----------------------------KNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
                                        K   PN+ TY+ +ID + KA R +DA  +  
Sbjct: 426 CLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLD 485

Query: 394 EMKFLGIG 401
           +M   G G
Sbjct: 486 DMVQRGFG 493


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 188/359 (52%), Gaps = 3/359 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L + G+ + AK +    L  G   + Y ++ LI  Y   G   EA+S+   M  
Sbjct: 273 NVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVL 332

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
               P + TYN+ I    K G      ++   DML N + PD +++N+L+   C  G L 
Sbjct: 333 KGASPTVATYNSFIYGLCKLG-RMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLM 391

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +A   LF+E+    +   I TYNTLLD +C+  ++++A ++  EM  + I+P++VTY+ +
Sbjct: 392 KAFL-LFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTIL 450

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ++G  K G L  A   F EM   G+ LD  +Y T +    KLG    A  + +EM + G 
Sbjct: 451 VNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D + YN ++ G  K G  +E   + ++M +D V P+ +TY+++I  + + G  ++  +
Sbjct: 511 PPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGRE 570

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           IF E    GL   VV Y+ LI      G +E A     EM ++GI PNV+TYNS+I+  
Sbjct: 571 IFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGL 629



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 248/517 (47%), Gaps = 44/517 (8%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  ++ T    G   T+  ++ L+ +Y + G  Q+ + + + M+R    PN VTYN +I+
Sbjct: 218 AVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 277

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              K G +F+    +  +ML+ G++    T+N L+      G+   A +L  EMV +G  
Sbjct: 278 GLSKKG-EFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
             + TYN+ +  +CK  +M  A + +++M A N+ P+VV+Y+T+I GY + G L  A  +
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 396

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F E++ + +    V+YNT+L    + G  E A  +  EM + GI  D VTY  L+ G  K
Sbjct: 397 FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCK 456

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G     +  F++M  + +  +   Y+T I    K G    A  +  E    G   D+++
Sbjct: 457 MGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLII 516

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           Y+ ++D LCK G +E A  LL +M  +G+ P+ VTY SII A   +             L
Sbjct: 517 YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR-----------L 565

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
            K +E      M S+        G T +  +  +  L+   AG+G+ E   R  I     
Sbjct: 566 RKGREI--FYEMLSK--------GLTPS--VVTYTVLIHGHAGKGRLE---RAFIY---- 606

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMG 688
            F +M +  I PNV+T+++++N   +    + A     E+    +F N+    ++ +L+ 
Sbjct: 607 -FSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNK---YSYTILIN 662

Query: 689 YRDNI--WVQALSLF----DEVKLMDSSTASAFYNAL 719
              N+  W +ALSL+    D     DS T SA    L
Sbjct: 663 ENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 187/391 (47%), Gaps = 31/391 (7%)

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           +  + +FD M+++ + PD    N +L +     L   A  ++  M   GI   I TYNTL
Sbjct: 181 EQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTL 240

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           LD+ CKG ++    ++++EM  +  +PN VTY+ +I+G +K G  + A  +  EM   G+
Sbjct: 241 LDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGL 300

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
            +   +YN ++  Y   G   EAL + +EM   G      TYN+ + G  K G+  +  +
Sbjct: 301 KVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQ 360

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
               M A+ + P++++Y+TLI  Y + G   +A  +F E +   L   +V Y+ L+D LC
Sbjct: 361 QLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLC 420

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           + G +E A  L  EM  EGI P++VTY  +++   +  +     +  +  L    E   L
Sbjct: 421 RQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML---HEGLEL 477

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
           D+                    ++ G+L   K G   +    ++E+L             
Sbjct: 478 DSYAYAT---------------RIVGEL---KLGDTSRAFSLQEEMLA----------KG 509

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             P+++ ++ +++   +  + E+AS LL+++
Sbjct: 510 FPPDLIIYNVVVDGLCKLGNLEEASELLQKM 540



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 149/296 (50%), Gaps = 6/296 (2%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++G + +A+  F+  L+EG     YA++  I    + G    A S+   M      P+L+
Sbjct: 456 KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLI 515

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
            YN V+D   K G + +   E+   M+ +GV PD +T+ S++      G     R +F E
Sbjct: 516 IYNVVVDGLCKLG-NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+ +G+   + TY  L+       +++ AF   +EM  K I PNV+TY+++I+G  K  R
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +D A N F+EM   GI  ++ SY  +++    +G ++EAL + K+M   G++ D+ T++A
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694

Query: 445 LLGGYGKQGKYDEVR--RMFEQMKADCVSPNLLTYSTLIDVYS---KGGLYKEAMQ 495
           LL   GK  K   V         K D +S  +   + L  V S    G + KE ++
Sbjct: 695 LLKQLGKDCKLQAVHGTSTMPTAKVDLLSQTVGAATALTSVSSIAENGHITKEQLR 750



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 127/298 (42%), Gaps = 26/298 (8%)

Query: 458 VRRMFEQMKADCVSP--NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           + R+ + +   CVS   ++     LI VYSK  + ++ + +F +  ++ L  DV   + +
Sbjct: 146 MHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRI 205

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           +  L    L+  AV +   M + GI+P +VTYN+++D++       C    V++ L    
Sbjct: 206 LRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSY-------CKGGKVQQGLDLLS 258

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
           E        +    +V   G +     +    L+ E    G K +      L I G F K
Sbjct: 259 EMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPL-IYGYFNK 317

Query: 636 ---------MHKLKIK---PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA- 682
                      ++ +K   P V T+++ +    +     DA   L ++ L +N +  V  
Sbjct: 318 GMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM-LANNLLPDVVS 376

Query: 683 -HGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
            + L+ GY R    ++A  LFDE++ +        YN L D L   G+   AQ + +E
Sbjct: 377 YNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVE 434


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 179/351 (50%), Gaps = 3/351 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V+ A+ + +   N G     Y + +LIS   + G  +EA  +   MK   L P  VTY
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +ID  C KG  D        D+M+R  + P   T+N L+      G  + A  +  +M
Sbjct: 345 NTLIDGYCNKG--DLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDM 402

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              GI  D  TYN L++  C+      AF +  EM +K I P +VTY+++I   +K  R+
Sbjct: 403 GDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRM 462

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             A ++F ++   G   D + +N ++  +   G  + A  + KEM+   I  D VTYN L
Sbjct: 463 KAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTL 522

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  ++GK +E R + ++MK   + P+ ++Y+TLI  YSK G   +A  I  E    G 
Sbjct: 523 MQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGF 582

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
              ++ Y+ALI  LCKN   + A  LL EM  +GI P+  TY S+I+  G+
Sbjct: 583 NPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGK 633



 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 201/399 (50%), Gaps = 5/399 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +  L+R          A +CF     +E+    + +  +AM+S+  +L + +    ++  
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMM--KEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
                  +TVY F+ +I+   + G  ++A     SM+   +KPN+VTYN VI   C +G 
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           V+   +V   D M   GV+PD  T+ SL++   +GG  E A  +  +M   G+     TY
Sbjct: 287 VEGARMV--LDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           NTL+D  C    +  AF    EM  + I P V TY+ +I      G++D+A  M  +M  
Sbjct: 345 NTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGD 404

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI  D ++YN +++ Y + G  ++A  +  EM S GI+   VTY +L+    K+ +   
Sbjct: 405 SGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKA 464

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +FE++  +  SP+L+ ++ LID +   G    A  + +E  +  +  D V Y+ L+ 
Sbjct: 465 ADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQ 524

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             C+ G VE A  LL EM + GIRP+ ++YN++I  + +
Sbjct: 525 GRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSK 563



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 197/382 (51%), Gaps = 3/382 (0%)

Query: 181 FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
            A+ R+        +   +I     L + D A   F+    +G    +  F+A++S + +
Sbjct: 154 LAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLK 213

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
               +    ++  M R  +K  + T+N +I+   K G   K   +    M   GV+P+ +
Sbjct: 214 LNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEG-KLKKAKDFIGSMENLGVKPNVV 272

Query: 301 TFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           T+N+++   CSRG + E AR + + M +RG++ D +TY +L+  +CKG +++ A  I+ +
Sbjct: 273 TYNTVIHGYCSRGRV-EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEK 331

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M    + P  VTY+T+IDGY   G L  A     EM    I     +YN ++      G+
Sbjct: 332 MKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGK 391

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            +EA  + K+M  SGI  D++TYN L+ GY + G   +   + ++M +  + P L+TY++
Sbjct: 392 MDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTS 451

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LI V SK    K A  +F +  + G   D+++++ALID  C NG ++ A +LL EM K  
Sbjct: 452 LIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRN 511

Query: 540 IRPNVVTYNSIIDAFGRSATTE 561
           I P+ VTYN+++    R    E
Sbjct: 512 IVPDEVTYNTLMQGRCREGKVE 533



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 195/411 (47%), Gaps = 36/411 (8%)

Query: 264 VTYNAVIDACG--KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           + ++ +I AC   K G D     E FD M   GV P   TFN++L++  +    E    L
Sbjct: 167 IVFDMLIRACCELKRGDD---AFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVL 223

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           + EM    I   ++T+N +++ +CK  ++  A + +  M    + PNVVTY+T+I GY  
Sbjct: 224 YAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCS 283

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            GR++ A  +   MK  G+  D  +Y +++S   K G+ EEA  + ++M+  G+   AVT
Sbjct: 284 RGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVT 343

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN L+ GY  +G   +     ++M    + P + TY+ LI      G   EA  + ++  
Sbjct: 344 YNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMG 403

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +G+  D + Y+ LI+  C+ G  + A +L DEM  +GI+P +VTY S+I    +    +
Sbjct: 404 DSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMK 463

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
              D  E+ +   +E A+ D +                    +F  L+      G  +  
Sbjct: 464 AADDLFEKII---REGASPDLI--------------------MFNALIDGHCANGNLDRA 500

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                     + ++M K  I P+ VT++ ++    R    E+A  LL+E++
Sbjct: 501 --------FALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMK 543



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 112/193 (58%), Gaps = 6/193 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I +L +  ++  A ++FE  + EG    +  F+ALI  +  +G    A ++   M +
Sbjct: 450 TSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDK 509

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            N+ P+ VTYN ++   C +G V+     E+  +M R G++PD I++N+L++  S+ G  
Sbjct: 510 RNIVPDEVTYNTLMQGRCREGKVE--EARELLKEMKRRGIRPDHISYNTLISGYSKRGDI 567

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  + +EM+  G +  + TYN L+  +CK  Q DLA E++ EM +K I+P+  TY ++
Sbjct: 568 NDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSL 627

Query: 376 IDGYAKAGRLDDA 388
           I+G    G++DD+
Sbjct: 628 IEG---IGKVDDS 637



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 3/220 (1%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G    A N+ +  +++G   T+  +++LI    +    + A  +F  + R    P+L+
Sbjct: 423 RCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLI 482

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            +NA+ID  C  G +D      +  +M +  + PD +T+N+L+    R G  E AR L  
Sbjct: 483 MFNALIDGHCANGNLD--RAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLK 540

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EM  RGI  D  +YNTL+    K   ++ AF I  EM +   +P ++TY+ +I G  K  
Sbjct: 541 EMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQ 600

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
           + D A  +  EM   GI  D  +Y +++    K+    EA
Sbjct: 601 QGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/363 (20%), Positives = 162/363 (44%), Gaps = 70/363 (19%)

Query: 320 NLFNEMVHRGIDQD---IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +L  E +H     D   + T+ +LLD+I + +Q  L   +     A N+SP++++ +T++
Sbjct: 38  HLHAETLHPNASTDSPLVITHQSLLDSI-QSSQWHLIKHL-----APNLSPSLIS-ATLL 90

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE-MES--S 433
             + K+   D AL   + + F G  LD  +    +++ ++    +  L + K+ +ES  +
Sbjct: 91  SLHKKS---DLALQFVTHIGFKG--LDIKTKCLAVAVVSRSPSPKSTLHLLKQTIESRVA 145

Query: 434 GIR---------------KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           G++               K ++ ++ L+    +  + D+    F+ MK   V P + T++
Sbjct: 146 GVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFN 205

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            ++ ++ K    +    ++ E  +  +K+ V  ++ +I+ LCK G ++ A   +  M   
Sbjct: 206 AMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENL 265

Query: 539 GIRPNVVTYNSIIDAFGRSATTECT--VDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
           G++PNVVTYN++I  +      E    V D+ ++ G + +S                   
Sbjct: 266 GVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYT----------------- 308

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
                   +G L++     GK E           G+ +KM ++ + P  VT++ +++   
Sbjct: 309 --------YGSLISGMCKGGKLEEAS--------GILEKMKEIGLLPTAVTYNTLIDG-- 350

Query: 657 RCN 659
            CN
Sbjct: 351 YCN 353


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/398 (30%), Positives = 205/398 (51%), Gaps = 11/398 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDL---AKNI 215
           ++ L+    + G +S AIQCF     R  RK++      +   +  RL K++L   A   
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCF-----RLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAF 212

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CG 274
           +E  L+ GY   V  F+ L+    +     EA  +F  + +  L+P +V++N +I+  C 
Sbjct: 213 YEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCK 272

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
            G +D    ++ F  M+ N V PD  T++ L+    + G  + A  LF EM  RG+  + 
Sbjct: 273 SGNLDQGFRLKRF--MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPND 330

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            T+ TL++  C   + DL  EI  +M  K + P+V+TY+T+I+G  K G L +A  +  E
Sbjct: 331 VTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIE 390

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G+  D+ +Y  ++    K G  E AL + KEM   GI  D V + AL+ G+ ++G+
Sbjct: 391 MTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQ 450

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
             E  R   +M    + P+  TY+ +I  + K G  K   ++ +E +  G    VV Y+ 
Sbjct: 451 VIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV 510

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           L++ LCK G +++A  LLD M   G+ P+ +TYN +++
Sbjct: 511 LLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 186/358 (51%), Gaps = 3/358 (0%)

Query: 202 ILGRLGKVDLAKNIFETALN-EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           ++ R GK + A ++F + L   G   +   FS L++AY  SGY  +AI  F  ++++NL+
Sbjct: 129 VVSRKGK-NSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQ 187

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
               +   + D   K  +        ++++L  G  PD   FN L+    +      A+ 
Sbjct: 188 IPFHSCGYLFDRLMKLNLT-SPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQL 246

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           LF E+  RG+   + ++NTL++  CK   +D  F +   M    + P+V TYS +I+G  
Sbjct: 247 LFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLC 306

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K G+LDDA  +F EM   G+  + V++ T+++ +   GR +  + + ++M   G++ D +
Sbjct: 307 KEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVI 366

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TYN L+ G  K G   E +++  +M    + P+  TY+ LID   K G  + A++I +E 
Sbjct: 367 TYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEM 426

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            + G++ D V ++ALI   C+ G V  A   L EM + GI+P+  TY  +I  F +  
Sbjct: 427 VKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKG 484



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/260 (20%), Positives = 111/260 (42%), Gaps = 32/260 (12%)

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           +E+ G  +  + ++ L+  Y   G + +  + F  ++   +     +   L D   K  L
Sbjct: 146 LEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNL 205

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
              A   + E    G   DV  ++ L+  LCK   +  A  L  E+ K G+RP VV++N+
Sbjct: 206 TSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNT 265

Query: 550 IIDAFGRSATTECTVDDVERDLGKQK-------ESANLDAMCSQDDKDVQEAGRTDNQII 602
           +I+ + +S   +     ++R + + +        S  ++ +C +        G+ D+   
Sbjct: 266 LINGYCKSGNLDQGF-RLKRFMMENRVFPDVFTYSVLINGLCKE--------GQLDDA-- 314

Query: 603 KVFGQLVAEKAGQGKKENRCRQEIL----CILG-------VFQKMHKLKIKPNVVTFSAI 651
               +L  E   +G   N      L    C+ G       ++Q+M +  +KP+V+T++ +
Sbjct: 315 ---NKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTL 371

Query: 652 LNACSRCNSFEDASMLLEEL 671
           +N   +     +A  L+ E+
Sbjct: 372 INGLCKVGDLREAKKLVIEM 391


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 229/475 (48%), Gaps = 34/475 (7%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            +I  + +LG++  A ++      +GY   V ++S +++ Y R G   +   +   MKR  
Sbjct: 695  VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 754

Query: 259  LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
            LKPN   Y ++I    +         E F +M+R G+ PD + + +L+   C RG +  A
Sbjct: 755  LKPNSYIYGSIIGLLCRI-CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI-RA 812

Query: 318  ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
            A   F EM  R I  D+ TY  ++   C+   M  A ++  EM  K + P+ VT++ +I+
Sbjct: 813  ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 872

Query: 378  GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            GY KAG + DA  + + M   G   + V+Y T++    K G  + A  +  EM   G++ 
Sbjct: 873  GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 932

Query: 438  DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
            +  TYN+++ G  K G  +E  ++  + +A  ++ + +TY+TL+D Y K G   +A +I 
Sbjct: 933  NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 992

Query: 498  REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            +E    GL+  +V ++ L++  C +G++E    LL+ M  +GI PN  T+NS++  +   
Sbjct: 993  KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY--- 1049

Query: 558  ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
                C  +++      +  +A    MCS   + V   G+T   ++K          G  K
Sbjct: 1050 ----CIRNNL------KAATAIYKDMCS---RGVGPDGKTYENLVK----------GHCK 1086

Query: 618  KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              N      L     FQ+M       +V T+S ++    +   F +A  + +++R
Sbjct: 1087 ARNMKEAWFL-----FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 1136



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 187/341 (54%), Gaps = 3/341 (0%)

Query: 215  IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-C 273
            +F      G    V +++ +I    + G  +EA  +   M+     P++++Y+ V++  C
Sbjct: 676  VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 735

Query: 274  GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
              G +D   V ++ + M R G++P+   + S++ +  R      A   F+EM+ +GI  D
Sbjct: 736  RFGELD--KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 793

Query: 334  IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
               Y TL+D  CK   +  A +   EM +++I+P+V+TY+ +I G+ + G + +A  +F 
Sbjct: 794  TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 853

Query: 394  EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            EM   G+  D V++  +++ Y K G  ++A  V   M  +G   + VTY  L+ G  K+G
Sbjct: 854  EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 913

Query: 454  KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
              D    +  +M    + PN+ TY+++++   K G  +EA+++  EF+ AGL AD V Y+
Sbjct: 914  DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 973

Query: 514  ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             L+DA CK+G ++ A  +L EM  +G++P +VT+N +++ F
Sbjct: 974  TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 1014



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 179/342 (52%), Gaps = 3/342 (0%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            +A+IS   ++G +  A  +F     +G       F+ LI+ Y ++G+ ++A  V N M +
Sbjct: 833  TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 892

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
                PN+VTY  +ID   K G D     E+  +M + G+QP+  T+NS++  +C  G + 
Sbjct: 893  AGCSPNVVTYTTLIDGLCKEG-DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 951

Query: 316  EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            EA + L  E    G++ D  TY TL+DA CK  +MD A EI+ EM  K + P +VT++ +
Sbjct: 952  EAVK-LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 1010

Query: 376  IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
            ++G+   G L+D   + + M   GI  +  ++N+++  Y      + A  + K+M S G+
Sbjct: 1011 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 1070

Query: 436  RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
              D  TY  L+ G+ K     E   +F++MK    S ++ TYS LI  + K   + EA +
Sbjct: 1071 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 1130

Query: 496  IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
            +F + ++ GL AD  ++    D   K    ++ V  +DE+ +
Sbjct: 1131 VFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1172



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 140/562 (24%), Positives = 249/562 (44%), Gaps = 61/562 (10%)

Query: 194  KLASAMISILGRLGKVDLAKNIFE-----TALNEGYGNTVYAFSALISAYGRSGYCQEAI 248
            K+A ++IS      K+++  +  +         + +G+    F          G  +EA 
Sbjct: 579  KVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREAR 638

Query: 249  SVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
             VF  M  Y L  ++ + N  +    K        + +F +    GV  +  ++N ++  
Sbjct: 639  RVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHF 698

Query: 309  CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
              + G  + A +L   M  +G   D+ +Y+T+++  C+  ++D  ++++  M  K + PN
Sbjct: 699  VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 758

Query: 369  VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
               Y ++I    +  +L +A   FSEM   GI  D V Y T++  + K G    A     
Sbjct: 759  SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 818

Query: 429  EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            EM S  I  D +TY A++ G+ + G   E  ++F +M    + P+ +T++ LI+ Y K G
Sbjct: 819  EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 878

Query: 489  LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
              K+A ++     QAG   +VV Y+ LID LCK G ++SA  LL EM K G++PN+ TYN
Sbjct: 879  HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 938

Query: 549  SIIDAFGRSATTECTVDDVERDLGKQKESANL-----------DAMCSQDDKDVQEAGRT 597
            SI++   +S   E  V      L  + E+A L           DA C   + D  +    
Sbjct: 939  SIVNGLCKSGNIEEAV-----KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ---- 989

Query: 598  DNQIIKVFGQLVAEKAGQGKKENRCRQEIL----CILGVFQKMHKL-------KIKPNVV 646
                     +++ E  G+G +       +L    C+ G+ +   KL        I PN  
Sbjct: 990  ---------EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 1040

Query: 647  TFSAILNACSRCNSFEDASMLLEEL---------RLFDNQVYGVAHGLLMGYRDNIWVQA 697
            TF++++      N+ + A+ + +++         + ++N V G      M        +A
Sbjct: 1041 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK-------EA 1093

Query: 698  LSLFDEVKLMDSSTASAFYNAL 719
              LF E+K    S + + Y+ L
Sbjct: 1094 WFLFQEMKGKGFSVSVSTYSVL 1115



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 183/373 (49%), Gaps = 3/373 (0%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            + +I    + G +  A   F    +      V  ++A+IS + + G   EA  +F+ M  
Sbjct: 798  TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 857

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
              L+P+ VT+  +I+   K G   K    + + M++ G  P+ +T+ +L+  +C  G L 
Sbjct: 858  KGLEPDSVTFTELINGYCKAG-HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL- 915

Query: 316  EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            ++A  L +EM   G+  +IFTYN++++ +CK   ++ A +++ E  A  ++ + VTY+T+
Sbjct: 916  DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 975

Query: 376  IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
            +D Y K+G +D A  +  EM   G+    V++N +++ +   G  E+   +   M + GI
Sbjct: 976  MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1035

Query: 436  RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
              +A T+N+L+  Y  +        +++ M +  V P+  TY  L+  + K    KEA  
Sbjct: 1036 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 1095

Query: 496  IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            +F+E K  G    V  YS LI    K      A  + D+M +EG+  +   ++   D   
Sbjct: 1096 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKY 1155

Query: 556  RSATTECTVDDVE 568
            +    +  VD ++
Sbjct: 1156 KGKRPDTIVDPID 1168


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 146/541 (26%), Positives = 260/541 (48%), Gaps = 47/541 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A I  L + G VD A  + +  + +G G   + ++ L+  + +    +EA  +F SM  
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS 339

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L PN  TY A+ID   K G + +  + I D+M+  G++ + +T+N+++   ++ G   
Sbjct: 340 SGLNPNRFTYTALIDGFIKEG-NIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMA 398

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +LFNEM+  GI+ D +TYN L+D   K   M  A E++AEM A+ ++P+  TYS +I
Sbjct: 399 KAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLI 458

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G   +  L  A  +  +M   G+  +   Y T++  Y +  R+E A+ + K M ++G+ 
Sbjct: 459 SGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVL 518

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D   YN L+ G  +  K +E + +   M    + PN  TY   I++YSK G  + A + 
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F++   +G+  + V+Y+ LI   C  G    A+S    M ++G+ P++  Y++II +  +
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK 638

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
           +              GK KE+  +        K ++     D   + ++  L++    +G
Sbjct: 639 N--------------GKTKEAMGVFL------KFLKTGVVPD---VFLYNSLISGFCKEG 675

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
             E   +        ++ +M    I PN+V ++ ++N    C S      L E  +LFD 
Sbjct: 676 DIEKASQ--------LYDEMLHNGINPNIVVYNTLINDYGYCKS----GNLTEAFKLFDE 723

Query: 677 QVY------GVAHGLLM---GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
            +       G  + +L+   G   N+  +ALSLF E +     + SAF N+L D     G
Sbjct: 724 MISKGISPDGYIYCILIDGCGKEGNLE-KALSLFHEAQQKSVGSLSAF-NSLIDSFCKHG 781

Query: 728 Q 728
           +
Sbjct: 782 K 782



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 184/370 (49%), Gaps = 10/370 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +IS L     +  A  + +  +  G    V+ +  LI AY +    + AI +   M  
Sbjct: 455 SVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIA 514

Query: 257 YNLKPNLVTYNA-VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + P+L  YN  +I  C    V+   ++ +  DM   G++P+  T+ + + + S+ G  
Sbjct: 515 NGVLPDLFCYNCLIIGLCRAKKVEEAKMLLV--DMGEKGIKPNAHTYGAFINLYSKSGEI 572

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A   F +M+  GI  +   Y  L+   C       A      M  K + P++  YS +
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGL--DRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           I   +K G+  +A+ +F  +KFL  G+  D   YN+++S + K G  E+A  +  EM  +
Sbjct: 633 IHSLSKNGKTKEAMGVF--LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN 690

Query: 434 GIRKDAVTYNALLGGYG--KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           GI  + V YN L+  YG  K G   E  ++F++M +  +SP+   Y  LID   K G  +
Sbjct: 691 GINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLE 750

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +A+ +F E +Q  +   +  +++LID+ CK+G V  A  L D+M  + + PN+VTY  +I
Sbjct: 751 KALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILI 809

Query: 552 DAFGRSATTE 561
           DA+G++   E
Sbjct: 810 DAYGKAEMME 819



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 145/593 (24%), Positives = 257/593 (43%), Gaps = 67/593 (11%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           LG ++ A ++F  +++EG+  T+   + L+    ++        V+ SM    + P++ T
Sbjct: 185 LGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYT 244

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           Y  VI A  K G   K  + +  +M +   +P+  T+N+ +    + G  + A  +   M
Sbjct: 245 YTNVIKAHCKVGDVIKGKM-VLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLM 302

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           + +G+  D  TY  L+D  CK  +   A  I   MP+  ++PN  TY+ +IDG+ K G +
Sbjct: 303 MEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNI 362

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           ++AL +  EM   G+ L+ V+YN ++   AK G   +A+ +  EM  +GI  D  TYN L
Sbjct: 363 EEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLL 422

Query: 446 LGGYGKQGKYDEVRRMFEQMKA-----------------------------------DCV 470
           + GY K     +   +  +MKA                                   + V
Sbjct: 423 IDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGV 482

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            PN+  Y TLI  Y +   Y+ A+++ +     G+  D+  Y+ LI  LC+   VE A  
Sbjct: 483 KPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKM 542

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LDAM 583
           LL +M ++GI+PN  TY + I+ + +S   +   +   +D+       N       +   
Sbjct: 543 LLVDMGEKGIKPNAHTYGAFINLYSKSGEIQ-VAERYFKDMLSSGIVPNNVIYTILIKGH 601

Query: 584 CSQDD--------KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
           C   +        K + E G   +  I+ +  ++   +  GK +          +GVF K
Sbjct: 602 CDVGNTVEALSTFKCMLEKGLIPD--IRAYSAIIHSLSKNGKTKEA--------MGVFLK 651

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM---GY-RD 691
             K  + P+V  ++++++   +    E AS L +E+         V +  L+   GY + 
Sbjct: 652 FLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKS 711

Query: 692 NIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQV 744
               +A  LFDE+     S     Y  L D     G    A  +  E +++ V
Sbjct: 712 GNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV 764



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 169/341 (49%), Gaps = 2/341 (0%)

Query: 225 GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVV 284
           G+ +  F   I  +   G+  EA SVF +       P L+  N ++    K  +      
Sbjct: 169 GSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANM-MGLFW 227

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +++  M+   + PD  T+ +++    + G     + + +EM  +    ++FTYN  +  +
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGL 286

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C+   +D A E+   M  K + P+  TY+ ++DG+ K  R  +A  +F  M   G+  +R
Sbjct: 287 CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +Y  ++  + K G  EEAL +  EM + G++ + VTYNA++GG  K G+  +   +F +
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    + P+  TY+ LID Y K     +A ++  E K   L      YS LI  LC +  
Sbjct: 407 MLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           ++ A  +LD+M + G++PNV  Y ++I A+ + +  E  ++
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 203/416 (48%), Gaps = 45/416 (10%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L++   + G   +A+  F   +++    + +    SA+I  L + GK   A  +F  
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA--YSAIIHSLSKNGKTKEAMGVFLK 651

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG--KG 276
            L  G    V+ +++LIS + + G  ++A  +++ M    + PN+V YN +I+  G  K 
Sbjct: 652 FLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKS 711

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G +     ++FD+M+  G+ PD   +  L+  C + G  E A +LF+E   + +   +  
Sbjct: 712 G-NLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGS-LSA 769

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           +N+L+D+ CK  ++  A E+  +M  K ++PN+VTY+ +ID Y KA  +++A  +F +M+
Sbjct: 770 FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDME 829

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
              I  + ++Y ++L  Y ++G   + + + K+ME+ GI  DA+ Y  +   Y K+GK  
Sbjct: 830 TRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGK-- 887

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
                                              EA+++  +    G+K +  ++ ALI
Sbjct: 888 ---------------------------------SLEALKLLNKSLVEGIKLEDDVFDALI 914

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG 572
             LCK   + + + LL EM KE +  +  T N+++  F +S       D+  + LG
Sbjct: 915 FHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNE----DEASKVLG 966



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 163/313 (52%), Gaps = 6/313 (1%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYG--RSGYCQEAISVFN 252
           L +++IS   + G ++ A  +++  L+ G    +  ++ LI+ YG  +SG   EA  +F+
Sbjct: 663 LYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFD 722

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSR 311
            M    + P+   Y  +ID CGK G + +  + +F +  +  V      FNSL+ + C  
Sbjct: 723 EMISKGISPDGYIYCILIDGCGKEG-NLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKH 780

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
           G + EA R LF++MV + +  +I TY  L+DA  K   M+ A ++  +M  +NI PN +T
Sbjct: 781 GKVIEA-RELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLT 839

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y++++  Y + G     +++F +M+  GI  D ++Y  + S Y K G+  EAL +  +  
Sbjct: 840 YTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSL 899

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             GI+ +   ++AL+    K+ +   V  +  +M  + +S +  T +TL+  + K G   
Sbjct: 900 VEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNED 959

Query: 492 EAMQIFREFKQAG 504
           EA ++    ++ G
Sbjct: 960 EASKVLGVMQRLG 972


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 179/331 (54%), Gaps = 7/331 (2%)

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH---VVEIFDDM 290
           +++A    G   EA+ +   +  +  + ++V+YNAV+    KG    K    V E+ D+M
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVL----KGLCMAKRWGDVEELMDEM 242

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           +R    P+ +TFN+L+    R GL+E    +  +M   G   DI  Y T++D ICK   +
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           ++A EI+  MP+  + PNVV Y+T++ G   A R  +A  + SEM      LD V++N +
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +  + + G  +  + + ++M S G   D +TY  ++ G+ K+G  DE   + + M +   
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            PN ++Y+ ++      G + +A ++  +  Q G   + V ++ LI+ LCK GLVE A+ 
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           LL +M   G  P++++Y+++ID  G++  TE
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 192/413 (46%), Gaps = 5/413 (1%)

Query: 145 ILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +L+K  F  C AD   Y  +L+ L     W    +     V+ +   N      + +I  
Sbjct: 203 LLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNI--VTFNTLIGY 260

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R G  +    +       G    +  ++ +I    + G+ + A  + N M  Y LKPN
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           +V YN V+         +K   E+  +M +     D +TFN L+    + GL +    L 
Sbjct: 321 VVCYNTVLKGLCSAE-RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            +M+  G   D+ TY T+++  CK   +D A  ++  M +    PN V+Y+ ++ G   A
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           GR  DA  + S+M   G   + V++NT+++   K G  E+A+ + K+M  +G   D ++Y
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           + ++ G GK GK +E   +   M    +SPN + YS++    S+ G   + +Q+F   K 
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
             +++D VLY+A+I +LCK    + A+     M   G  PN  TY  +I    
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLA 612



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 181/365 (49%), Gaps = 16/365 (4%)

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
           ++  + +VD A NI               F+ LI    R+G  +    V   M  +   P
Sbjct: 238 LMDEMVRVDCAPNIV-------------TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284

Query: 262 NLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           ++  Y  +ID  C +G ++  +  EI + M   G++P+ + +N++L        W+ A  
Sbjct: 285 DIRMYATIIDGICKEGHLEVAN--EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L +EM  +    D  T+N L+D  C+   +D   E++ +M +    P+V+TY+T+I+G+ 
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC 402

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K G +D+A+ +   M   G   + VSY  VL      GR+ +A  +  +M   G   + V
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           T+N L+    K+G  ++   + +QM  +  SP+L++YST+ID   K G  +EA+++    
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
              G+  + ++YS++  AL + G V   + + D +    IR + V YN++I +  +   T
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 561 ECTVD 565
           +  +D
Sbjct: 583 DRAID 587



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 173/356 (48%), Gaps = 3/356 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++  A  + +    +G       +  ++ A  RSG  + ++ V  +M       +    
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNC 184

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N V++A C +G VD    V +   +   G + D +++N++L        W     L +EM
Sbjct: 185 NLVLNAICEQGCVD--EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V      +I T+NTL+  +C+    +   E++A+M     +P++  Y+T+IDG  K G L
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           + A  + + M   G+  + V YNTVL       R++EA  +  EM       D VT+N L
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +  + + G  D V  + EQM +    P+++TY+T+I+ + K GL  EA+ + +     G 
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           K + V Y+ ++  LC  G    A  L+ +M ++G  PN VT+N++I+   +    E
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/404 (22%), Positives = 188/404 (46%), Gaps = 41/404 (10%)

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  + +T+  ++  +C   ++  A E++ EM  K  +P    Y  +++   ++G   +++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            +   M   G  LD  + N VL+   + G  +EA+ + +++   G   D V+YNA+L G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 450 GKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
               ++ +V  + ++M + DC +PN++T++TLI    + GL++   ++  +  + G   D
Sbjct: 227 CMAKRWGDVEELMDEMVRVDC-APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
           + +Y+ +ID +CK G +E A  +L+ M   G++PNVV YN+++          C+ +   
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL-------CSAE--- 335

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
               + KE+  L +   Q D  + +   T N ++  F Q        G  +         
Sbjct: 336 ----RWKEAEELLSEMFQKDCPLDDV--TFNILVDFFCQ-------NGLVDR-------- 374

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH----- 683
           ++ + ++M      P+V+T++ ++N   +    ++A MLL+ +     +   V++     
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 684 GLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
           GL    R   WV A  L  ++           +N L + L   G
Sbjct: 435 GLCSAGR---WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG 475



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 109/487 (22%), Positives = 207/487 (42%), Gaps = 75/487 (15%)

Query: 295 VQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           V P+  TF  ++  +C+RG + +A   + +EM  +G       Y+ +L+A C+      +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALE-VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNS 165

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             ++  M AK  + +    + +++   + G +D+A+ +  ++ F G   D VSYN VL  
Sbjct: 166 VRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
                R+ +   +  EM       + VT+N L+G   + G ++ V  +  QM     +P+
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA------------------- 514
           +  Y+T+ID   K G  + A +I       GLK +VV Y+                    
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 515 ----------------LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
                           L+D  C+NGLV+  + LL++M   G  P+V+TY ++I+ F +  
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 559 TTECTVDDVE--RDLGKQKESAN----LDAMCSQDDKDVQEAGR-TDNQIIKVFGQLVAE 611
             +  V  ++     G +  + +    L  +CS        AGR  D +  ++  Q++ +
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS--------AGRWVDAE--ELMSQMIQQ 455

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKL-------KIKPNVVTFSAILNACSRCNSFEDA 664
                          LC  G+ ++  +L          P+++++S +++   +    E+A
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515

Query: 665 SMLLEELRLFDNQ-------VY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFY 716
              LE L +  N+       +Y  +A  L    R N  +Q   +FD +K     + +  Y
Sbjct: 516 ---LELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ---MFDNIKDTTIRSDAVLY 569

Query: 717 NALTDML 723
           NA+   L
Sbjct: 570 NAVISSL 576


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 194/348 (55%), Gaps = 1/348 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L +   V+ A ++F    + G   TV  +++LI     SG  ++A  +F  M  
Sbjct: 248 SIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLE 307

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           +N+KP++VT++ ++DA  K GV  +  + +F  M++  ++PD +T++SL+    +  LW+
Sbjct: 308 WNMKPDVVTFSILVDALCKEGVVLE-ALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWK 366

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            +  L NEM+ R I  D+ T++  +D  CK   +  A  I+  M  + + PNVVTY++++
Sbjct: 367 ESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLM 426

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DGY    ++D+A  +F  M   G   D +SYN ++  Y K  R +EA  +  EM   G+ 
Sbjct: 427 DGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLT 486

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +++T+  L+ G  + G+    + +F++M +    P+L+TYSTL+  + K G   EA+ +
Sbjct: 487 PNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALAL 546

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
           F   K++ LK + V+   L+  +CK G +E A  L   ++ E ++P+V
Sbjct: 547 FEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 182/350 (52%), Gaps = 1/350 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++  A    +  ++ GY  TVY  + +++   + G    AI     M   + +P +V+Y
Sbjct: 188 GRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSY 247

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           + +ID+  K  +     V++F  M   G+ P  +T+NSL+      G W+ A  LF EM+
Sbjct: 248 SIIIDSLCKNRL-VNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEML 306

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
              +  D+ T++ L+DA+CK   +  A  +  +M    + P++VTYS++I G  K+    
Sbjct: 307 EWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWK 366

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           ++  + +EM    I  D V+++  + ++ K G   EA  +   M   G+R + VTYN+L+
Sbjct: 367 ESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLM 426

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GY    + DE R++F+ M     +P++L+Y+ LI  Y K     EA Q+F E    GL 
Sbjct: 427 DGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLT 486

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            + + ++ LI  LC+ G   +A  L  +M   G  P+++TY++++  F +
Sbjct: 487 PNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCK 536



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 201/367 (54%), Gaps = 5/367 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +++ L ++GK   A    +  +       V ++S +I +  ++    EA+ +F  M+ 
Sbjct: 213 TMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRS 272

Query: 257 YNLKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
             + P +VTYN++I   C  G   +K    +F +ML   ++PD +TF+ L+ A+C  G +
Sbjct: 273 IGISPTVVTYNSLIYGMCNSG--QWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVV 330

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA  ++F +M+   ++ DI TY++L+  +CK +    +  ++ EM ++NI P+VVT+S 
Sbjct: 331 LEAL-SVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSI 389

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
            +D + K G + +A ++ + M   G+  + V+YN+++  Y    + +EA  V   M + G
Sbjct: 390 WVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKG 449

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D ++YN L+ GY K  + DE +++F++M    ++PN +T++TLI    + G    A 
Sbjct: 450 CAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAK 509

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++F++    G   D++ YS L+   CK+G ++ A++L + + K  ++PN V    ++   
Sbjct: 510 ELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGM 569

Query: 555 GRSATTE 561
            ++   E
Sbjct: 570 CKAGKLE 576



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 237/486 (48%), Gaps = 31/486 (6%)

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
           G     D A   F   ++      +  F+ L++A  R  +    +S++  M+ + +  ++
Sbjct: 80  GSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSV 139

Query: 264 VTYNAVIDACGK---GGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAAR 319
            T   +I+        G+ F  + +IF    + G +P  ITFN+L+  +C  G + EA  
Sbjct: 140 YTLTILINCLCHLHLVGLGFSVLGKIF----KLGFKPSIITFNTLINGLCIEGRIVEAME 195

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            L + ++ RG    ++T+  +++ +CK  +   A   M +M   +  P VV+YS +ID  
Sbjct: 196 QL-DYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSL 254

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K   +++A+++F  M+ +GI    V+YN+++      G++++A ++ KEM    ++ D 
Sbjct: 255 CKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDV 314

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           VT++ L+    K+G   E   +F +M    + P+++TYS+LI    K  L+KE+  +  E
Sbjct: 315 VTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNE 374

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
                ++ DVV +S  +D  CK G+V  A S+++ M + G+RPNVVTYNS++D +   + 
Sbjct: 375 MLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHS- 433

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQD--DKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
                   + D  ++     ++  C+ D    ++   G   ++ I    QL  E + +G 
Sbjct: 434 --------QMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGL 485

Query: 618 KENRCRQEI----LCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
             N          LC  G       +F+KM      P+++T+S +L+   +    ++A  
Sbjct: 486 TPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALA 545

Query: 667 LLEELR 672
           L E L+
Sbjct: 546 LFEALK 551



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 153/292 (52%), Gaps = 1/292 (0%)

Query: 268 AVIDACGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           AV D C  G   +F   +  F+ M+     P    FN LLA   R   +++  +++ +M 
Sbjct: 72  AVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKME 131

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G+   ++T   L++ +C    + L F ++ ++      P+++T++T+I+G    GR+ 
Sbjct: 132 FFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIV 191

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A+     +   G      ++  +++   K+G+   A++  K+M       + V+Y+ ++
Sbjct: 192 EAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIII 251

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
               K    +E   +F  M++  +SP ++TY++LI      G +K+A  +F+E  +  +K
Sbjct: 252 DSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMK 311

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            DVV +S L+DALCK G+V  A+S+  +M +  + P++VTY+S+I    +S+
Sbjct: 312 PDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSS 363


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 211/405 (52%), Gaps = 4/405 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ ++     +GE  +A +     V R+    D     S ++  L R GK+D A  +   
Sbjct: 80  YSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTS-VVDGLCRDGKMDRACEMVRE 138

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS-MKRYNLKPNLVTYNAVIDACGKGG 277
              +G     + FSALI+ +  +    EA+ ++   +   + KP++VTY A+ID   K G
Sbjct: 139 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSG 198

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            + +  +++   M      P+ +T++SLL    + G  + A +LF  M  +G   ++ TY
Sbjct: 199 -NLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTY 257

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TL+  +C   ++D A  +M EM A    P+ V+Y+ ++DGY + GR+++A  +F EM  
Sbjct: 258 TTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMAT 317

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS-GIRKDAVTYNALLGGYGKQGKYD 456
                DR++Y  ++  +    R EEA  + + M+++ GI  D VTY+ ++ GY +  ++ 
Sbjct: 318 KSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFV 377

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E     ++M A  V+PN +TYS+LID   K G    AM++ +      ++  V  ++++I
Sbjct: 378 EAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVI 437

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            ALC+ G ++ A  LL  M   G+ P +VTY ++++ F R+   E
Sbjct: 438 GALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRME 482



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 231/460 (50%), Gaps = 29/460 (6%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKR-YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           ++ +++   ++    +A  V   M+   ++ P+LVTY+ VI+  C +G +D     EI  
Sbjct: 44  YNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMD--RACEILR 101

Query: 289 DML-RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           +M+ R+G+ PD +T+ S++    R G  + A  +  EM  +G++ D FT++ L+   C  
Sbjct: 102 EMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNA 161

Query: 348 AQMDLAFEIMAE-MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
            ++D A ++  E + + +  P+VVTY+ +IDG+ K+G L+ A+ M   M+      + V+
Sbjct: 162 RKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVT 221

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y+++L    K G  ++AL + + M S G   + VTY  L+ G     K D  R + ++M 
Sbjct: 222 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT 281

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           A C  P+ ++Y+ L+D Y + G  +EA Q+F+E        D + Y+ L+   C    +E
Sbjct: 282 ATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLE 341

Query: 527 SAVSLLDEM-TKEGIRPNVVTYNSIIDAFGRSA----TTECTVDDVERDLGKQ--KESAN 579
            A  LL+ M T  GI P+VVTY+ ++  + R+       E   + + R++       S+ 
Sbjct: 342 EARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSL 401

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
           +D +C        +AGR D+  ++V   +V ++              LC LG   +  KL
Sbjct: 402 IDGLC--------KAGRVDHA-MEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKL 452

Query: 640 KI-------KPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            +       +P +VT++ +L   SR    E A  L E +R
Sbjct: 453 LVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMR 492



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 232/487 (47%), Gaps = 44/487 (9%)

Query: 197 SAMISILGRLGKVDLAKNIF-ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           S +I+   + G++D A  I  E    +G    V  +++++    R G    A  +   MK
Sbjct: 81  STVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMK 140

Query: 256 RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGV-QPDRITFNSLLAVCSRGG 313
              ++P+  T++A+I   C    VD    ++++ ++L +   +PD +T+ +L+    + G
Sbjct: 141 LKGVEPDKFTFSALITGWCNARKVD--EALKLYKEILTSSSWKPDVVTYTALIDGFCKSG 198

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             E A  +   M  R    ++ TY++LL  +CK   +D A ++   M +K   PNVVTY+
Sbjct: 199 NLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYT 258

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+I G   A ++D A  +  EM       D VSYN +L  Y +LGR EEA  + KEM + 
Sbjct: 259 TLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATK 318

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK-ADCVSPNLLTYSTLIDVYSKGGLYKE 492
               D +TY  L+ G+    + +E R + E MK A  + P+++TYS ++  YS+   + E
Sbjct: 319 SCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVE 378

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A +  +E     +  + V YS+LID LCK G V+ A+ +L  M  + + P+V T+NS+I 
Sbjct: 379 AAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIG 438

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
           A  R              LG   E+  L  + +     ++    T   +++ F      +
Sbjct: 439 ALCR--------------LGDMDEAWKL--LVAMAAHGLEPGMVTYTTLLEGFS-----R 477

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKP----NVV---TFSAILNACSRCNSFEDAS 665
            G        R EI     +F+ M K   K     N+V    FSA++    +    + A 
Sbjct: 478 TG--------RMEI--AYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAM 527

Query: 666 MLLEELR 672
            ++EELR
Sbjct: 528 AVVEELR 534



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 169/305 (55%), Gaps = 5/305 (1%)

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           +P +VT+  +ID   K     K  +  F+ M R  V P+  T+N ++    +  L   A 
Sbjct: 4   QPTVVTWTIIIDGFCKAN-QLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAY 61

Query: 320 NLFNEMVH-RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN-ISPNVVTYSTMID 377
            +  EM   + +  D+ TY+T+++  CK  +MD A EI+ EM  ++ I+P+VVTY++++D
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE-MESSGIR 436
           G  + G++D A  M  EMK  G+  D+ +++ +++ +    + +EAL + KE + SS  +
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTY AL+ G+ K G  ++  +M   M+     PN++TYS+L+    K G   +A+ +
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           FR     G   +VV Y+ LI  LC    V++A  L+DEMT     P+ V+YN+++D + R
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR 301

Query: 557 SATTE 561
               E
Sbjct: 302 LGRIE 306



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 45/221 (20%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G    V  +S +++ Y R+    EA      M   N+ PN VTY+++ID  C  G VD  
Sbjct: 355 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVD-- 412

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
           H +E+  +M+   V+P   TFNS++    R G  + A  L   M   G++  + TY TLL
Sbjct: 413 HAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLL 472

Query: 342 DA------------------------------------------ICKGAQMDLAFEIMAE 359
           +                                           +CK  ++D A  ++ E
Sbjct: 473 EGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEE 532

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           + ++   P       ++DG  +AGR ++A  + + +  +G+
Sbjct: 533 LRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573



 Score = 43.1 bits (100), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 37/259 (14%)

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
           VV ++ +ID  CK   ++ A++  ++M +E + PN  TYN +++   ++  T        
Sbjct: 7   VVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLT-------- 57

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
                 K    L  M  +D K V     T + +I  F +       QG+ +  C  EIL 
Sbjct: 58  -----SKAYEVLKEM--RDGKSVAPDLVTYSTVINGFCK-------QGEMDRAC--EIL- 100

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA-HGLLM 687
                + + +  I P+VVT++++++   R    + A  ++ E++L   +        L+ 
Sbjct: 101 ----REMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 156

Query: 688 GYRDNIWV-QALSLFDEVKLMDSSTASAF-YNALTDMLWHFG--QKRGAQLVVLEGKRRQ 743
           G+ +   V +AL L+ E+    S       Y AL D     G  +K    L V+EG  R+
Sbjct: 157 GWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEG--RK 214

Query: 744 VWENVWSESCLDLHLMSSG 762
              NV + S L   L  +G
Sbjct: 215 CVPNVVTYSSLLHGLCKAG 233


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 179/331 (54%), Gaps = 7/331 (2%)

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH---VVEIFDDM 290
           +++A    G   EA+ +   +  +  + ++V+YNAV+    KG    K    V E+ D+M
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVL----KGLCMAKRWGDVEELMDEM 242

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           +R    P+ +TFN+L+    R GL+E    +  +M   G   DI  Y T++D ICK   +
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           ++A EI+  MP+  + PNVV Y+T++ G   A R  +A  + SEM      LD V++N +
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +  + + G  +  + + ++M S G   D +TY  ++ G+ K+G  DE   + + M +   
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            PN ++Y+ ++      G + +A ++  +  Q G   + V ++ LI+ LCK GLVE A+ 
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           LL +M   G  P++++Y+++ID  G++  TE
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 192/413 (46%), Gaps = 5/413 (1%)

Query: 145 ILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +L+K  F  C AD   Y  +L+ L     W    +     V+ +   N      + +I  
Sbjct: 203 LLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIV--TFNTLIGY 260

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R G  +    +       G    +  ++ +I    + G+ + A  + N M  Y LKPN
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           +V YN V+         +K   E+  +M +     D +TFN L+    + GL +    L 
Sbjct: 321 VVCYNTVLKGLCSAE-RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            +M+  G   D+ TY T+++  CK   +D A  ++  M +    PN V+Y+ ++ G   A
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           GR  DA  + S+M   G   + V++NT+++   K G  E+A+ + K+M  +G   D ++Y
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           + ++ G GK GK +E   +   M    +SPN + YS++    S+ G   + +Q+F   K 
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
             +++D VLY+A+I +LCK    + A+     M   G  PN  TY  +I    
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLA 612



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 173/356 (48%), Gaps = 3/356 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++  A  + +    +G       +  ++ A  RSG  + ++ V  +M       +    
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNC 184

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N V++A C +G VD    V +   +   G + D +++N++L        W     L +EM
Sbjct: 185 NLVLNAICEQGCVD--EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V      +I T+NTL+  +C+    +   E++A+M     +P++  Y+T+IDG  K G L
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           + A  + + M   G+  + V YNTVL       R++EA  +  EM       D VT+N L
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +  + + G  D V  + EQM +    P+++TY+T+I+ + K GL  EA+ + +     G 
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           K + V Y+ ++  LC  G    A  L+ +M ++G  PN VT+N++I+   +    E
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/401 (21%), Positives = 188/401 (46%), Gaps = 35/401 (8%)

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  + +T+  ++  +C   ++  A E++ EM  K  +P    Y  +++   ++G   +++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            +   M   G  LD  + N VL+   + G  +EA+ + +++   G   D V+YNA+L G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 450 GKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
               ++ +V  + ++M + DC +PN++T++TLI    + GL++   ++  +  + G   D
Sbjct: 227 CMAKRWGDVEELMDEMVRVDC-APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
           + +Y+ +ID +CK G +E A  +L+ M   G++PNVV YN+++          C+ +   
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL-------CSAE--- 335

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
               + KE+  L +   Q D  + +   T N ++  F Q        G  +         
Sbjct: 336 ----RWKEAEELLSEMFQKDCPLDDV--TFNILVDFFCQ-------NGLVDR-------- 374

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
           ++ + ++M      P+V+T++ ++N   +    ++A MLL+ +     +   V++ +++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 689 --YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
                  WV A  L  ++           +N L + L   G
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG 475



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 109/487 (22%), Positives = 207/487 (42%), Gaps = 75/487 (15%)

Query: 295 VQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           V P+  TF  ++  +C+RG + +A   + +EM  +G       Y+ +L+A C+      +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALE-VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNS 165

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             ++  M AK  + +    + +++   + G +D+A+ +  ++ F G   D VSYN VL  
Sbjct: 166 VRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
                R+ +   +  EM       + VT+N L+G   + G ++ V  +  QM     +P+
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA------------------- 514
           +  Y+T+ID   K G  + A +I       GLK +VV Y+                    
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 515 ----------------LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
                           L+D  C+NGLV+  + LL++M   G  P+V+TY ++I+ F +  
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 559 TTECTVDDVE--RDLGKQKESAN----LDAMCSQDDKDVQEAGR-TDNQIIKVFGQLVAE 611
             +  V  ++     G +  + +    L  +CS        AGR  D +  ++  Q++ +
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS--------AGRWVDAE--ELMSQMIQQ 455

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKL-------KIKPNVVTFSAILNACSRCNSFEDA 664
                          LC  G+ ++  +L          P+++++S +++   +    E+A
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515

Query: 665 SMLLEELRLFDNQ-------VY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFY 716
              LE L +  N+       +Y  +A  L    R N  +Q   +FD +K     + +  Y
Sbjct: 516 ---LELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ---MFDNIKDTTIRSDAVLY 569

Query: 717 NALTDML 723
           NA+   L
Sbjct: 570 NAVISSL 576


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 179/331 (54%), Gaps = 7/331 (2%)

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH---VVEIFDDM 290
           +++A    G   EA+ +   +  +  + ++V+YNAV+    KG    K    V E+ D+M
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVL----KGLCMAKRWGDVEELMDEM 242

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           +R    P+ +TFN+L+    R GL+E    +  +M   G   DI  Y T++D ICK   +
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           ++A EI+  MP+  + PNVV Y+T++ G   A R  +A  + SEM      LD V++N +
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +  + + G  +  + + ++M S G   D +TY  ++ G+ K+G  DE   + + M +   
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            PN ++Y+ ++      G + +A ++  +  Q G   + V ++ LI+ LCK GLVE A+ 
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           LL +M   G  P++++Y+++ID  G++  TE
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 192/413 (46%), Gaps = 5/413 (1%)

Query: 145 ILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +L+K  F  C AD   Y  +L+ L     W    +     V+ +   N      + +I  
Sbjct: 203 LLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIV--TFNTLIGY 260

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R G  +    +       G    +  ++ +I    + G+ + A  + N M  Y LKPN
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           +V YN V+         +K   E+  +M +     D +TFN L+    + GL +    L 
Sbjct: 321 VVCYNTVLKGLCSAE-RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            +M+  G   D+ TY T+++  CK   +D A  ++  M +    PN V+Y+ ++ G   A
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           GR  DA  + S+M   G   + V++NT+++   K G  E+A+ + K+M  +G   D ++Y
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           + ++ G GK GK +E   +   M    +SPN + YS++    S+ G   + +Q+F   K 
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
             +++D VLY+A+I +LCK    + A+     M   G  PN  TY  +I    
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLA 612



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 173/356 (48%), Gaps = 3/356 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++  A  + +    +G       +  ++ A  RSG  + ++ V  +M       +    
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNC 184

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N V++A C +G VD    V +   +   G + D +++N++L        W     L +EM
Sbjct: 185 NLVLNAICEQGCVD--EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V      +I T+NTL+  +C+    +   E++A+M     +P++  Y+T+IDG  K G L
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           + A  + + M   G+  + V YNTVL       R++EA  +  EM       D VT+N L
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +  + + G  D V  + EQM +    P+++TY+T+I+ + K GL  EA+ + +     G 
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           K + V Y+ ++  LC  G    A  L+ +M ++G  PN VT+N++I+   +    E
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/401 (21%), Positives = 188/401 (46%), Gaps = 35/401 (8%)

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  + +T+  ++  +C   ++  A E++ EM  K  +P    Y  +++   ++G   +++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            +   M   G  LD  + N VL+   + G  +EA+ + +++   G   D V+YNA+L G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 450 GKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
               ++ +V  + ++M + DC +PN++T++TLI    + GL++   ++  +  + G   D
Sbjct: 227 CMAKRWGDVEELMDEMVRVDC-APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
           + +Y+ +ID +CK G +E A  +L+ M   G++PNVV YN+++          C+ +   
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL-------CSAE--- 335

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
               + KE+  L +   Q D  + +   T N ++  F Q        G  +         
Sbjct: 336 ----RWKEAEELLSEMFQKDCPLDDV--TFNILVDFFCQ-------NGLVDR-------- 374

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
           ++ + ++M      P+V+T++ ++N   +    ++A MLL+ +     +   V++ +++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 689 --YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
                  WV A  L  ++           +N L + L   G
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG 475



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 109/487 (22%), Positives = 207/487 (42%), Gaps = 75/487 (15%)

Query: 295 VQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           V P+  TF  ++  +C+RG + +A   + +EM  +G       Y+ +L+A C+      +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALE-VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNS 165

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             ++  M AK  + +    + +++   + G +D+A+ +  ++ F G   D VSYN VL  
Sbjct: 166 VRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
                R+ +   +  EM       + VT+N L+G   + G ++ V  +  QM     +P+
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA------------------- 514
           +  Y+T+ID   K G  + A +I       GLK +VV Y+                    
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 515 ----------------LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
                           L+D  C+NGLV+  + LL++M   G  P+V+TY ++I+ F +  
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 559 TTECTVDDVE--RDLGKQKESAN----LDAMCSQDDKDVQEAGR-TDNQIIKVFGQLVAE 611
             +  V  ++     G +  + +    L  +CS        AGR  D +  ++  Q++ +
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS--------AGRWVDAE--ELMSQMIQQ 455

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKL-------KIKPNVVTFSAILNACSRCNSFEDA 664
                          LC  G+ ++  +L          P+++++S +++   +    E+A
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515

Query: 665 SMLLEELRLFDNQ-------VY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFY 716
              LE L +  N+       +Y  +A  L    R N  +Q   +FD +K     + +  Y
Sbjct: 516 ---LELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ---MFDNIKDTTIRSDAVLY 569

Query: 717 NALTDML 723
           NA+   L
Sbjct: 570 NAVISSL 576


>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
          Length = 1443

 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 147/536 (27%), Positives = 253/536 (47%), Gaps = 61/536 (11%)

Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
           R  R+    ++ +AM+ +  R G+ D A+ + +   ++     + +F+ LI+A  +SG  
Sbjct: 213 RFAREGATVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCL 272

Query: 245 QE--AISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
               A+ + + +++  L+P+ +TYN +I AC +G  +    V +F++M+ +  +PD  T+
Sbjct: 273 AAGVALELLHEVRQAGLRPDAITYNTLISACSQGS-NLDDAVAVFEEMIASECRPDLWTY 331

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           N++++V  R G  + A  +F E+V +G   D  TYN+LL A  K   ++    +  E+  
Sbjct: 332 NAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVK 391

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
                + +TY+TMI  Y K GRLD AL ++ EM+ +G   D V+Y  ++    K+ R  E
Sbjct: 392 AGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISE 451

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A  V +EM  +G++   VT++AL+  Y K G+ D+  R F++M    V P+ L Y  ++D
Sbjct: 452 AGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLD 511

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK--------------------N 522
           V+++    ++ M ++R   + G K D  LY  L+ AL K                    N
Sbjct: 512 VFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMN 571

Query: 523 GLVESAV-----------SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
            LV S++           SLL     +G  P+  +  SI+DA+ +    E  +  +E   
Sbjct: 572 PLVISSILIKAECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIR 631

Query: 572 GKQKESANLDAMCS-----QDDKDV---QEAGRTDNQIIK--VFGQ-------LVAEKAG 614
                S NL + CS     ++ K V   QE  R   Q++K   FGQ       L+     
Sbjct: 632 QHVPNSHNLISECSIMLLCKNGKIVDAIQEYSR--KQMLKRGSFGQDCDLYEYLITYLEE 689

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                  C+        VF  M  L I P+   F + +  C R    E A  L+++
Sbjct: 690 AELFPEACQ--------VFCDMQFLGIVPSQKVFPSFIFQCCRLGFPETAYQLMDD 737



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 153/646 (23%), Positives = 293/646 (45%), Gaps = 38/646 (5%)

Query: 231  FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN-AVIDACGKGGVDFKHVVEIFDD 289
            F + I    R G+ + A  + +   R ++  N+++   A+I+A GK  +      E F  
Sbjct: 715  FPSFIFQCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGK--LKLWQQAENFVK 772

Query: 290  MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
             L+     DR  +N+L+   +  GL+E AR +F+ M+ +G    + + N ++ A+    +
Sbjct: 773  GLKQESGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGR 832

Query: 350  MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            +D  + ++ E+   +I  +  T   M++ +AKAG + + + +++ MK  G   +   Y  
Sbjct: 833  LDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRI 892

Query: 410  VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
            ++S+     RF +  L+  EME +G + D V  N LL  Y   G +D    ++  +    
Sbjct: 893  MISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAG 952

Query: 470  VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            + P+  TY+TLI +YS+    +E   +  E  + GL   +  Y  L+ A  K  L E A 
Sbjct: 953  LEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQAD 1012

Query: 530  SLLDEMTKEGIRPNVVTYNSIIDAF--GRSATTECTVDDVERDLGKQKESANLDAMCS-- 585
             L +EM  +G R N   Y+ ++  +   R+ +    +    ++ G +   A +  + +  
Sbjct: 1013 LLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSY 1072

Query: 586  ------QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
                   + + V  + ++ N  I          A       R R   L I  + + M + 
Sbjct: 1073 GTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYL-----RNRDYSLGITKLLE-MKRD 1126

Query: 640  KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALS 699
             ++P+   +++ + A S C   +DA +LL+ L+   +  + +   LL     +++ +  S
Sbjct: 1127 GVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQ---DCGFDLPIRLLTERTSSLFTEVDS 1183

Query: 700  LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVW--------ENVWSE 751
              +++  ++ S +  F NAL D+LW F ++  A  +     +R ++        E  W  
Sbjct: 1184 FLEKLGTLEDSASLNFVNALEDLLWAFERRATASWIFQLAVKRSIYHHNIFRVEEKDWGA 1243

Query: 752  SCLDLHLMSSGAARAMVHAWLLNIHSIVFEGH-ELPKLLSILTGWGKHSKVVGDGALRRA 810
               DL  +S+GAA   +  WL  +     +G  E PK + ++TG G+++ V    +LR+ 
Sbjct: 1244 ---DLRKLSAGAALVALTLWLDQMQDASLQGAPESPKSIVLVTGEGEYNMV----SLRKT 1296

Query: 811  VEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHD 856
            +   L  MG+PF       GRF+     +  WL++S     L L D
Sbjct: 1297 IRAYLLEMGSPFLPCRSRSGRFVVKAYSLKMWLKDSPFCLDLELKD 1342



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 145/324 (44%), Gaps = 61/324 (18%)

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE------------------------ 422
           DAL     ++F   G     +N ++ +YA+ GRF++                        
Sbjct: 204 DALAEDVFLRFAREGATVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLI 263

Query: 423 -------------ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
                        AL +  E+  +G+R DA+TYN L+    +    D+   +FE+M A  
Sbjct: 264 NARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASE 323

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P+L TY+ ++ V+ + G  +EA  +F+E  + G + D V Y++L+ A  K G VE   
Sbjct: 324 CRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVE 383

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESAN----LDAM 583
            + +E+ K G R + +TYN++I  +G+    +  +   D  R +G   ++      +D++
Sbjct: 384 RVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSL 443

Query: 584 CSQDDKDVQEAGRTDNQI--------IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
              D   + EAG+   ++        +  F  L+   A  G++++  R         F +
Sbjct: 444 GKMD--RISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAER--------TFDR 493

Query: 636 MHKLKIKPNVVTFSAILNACSRCN 659
           M +  +KP+ + +  +L+  +R +
Sbjct: 494 MVESGVKPDRLAYLVMLDVFARSD 517



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 95/475 (20%), Positives = 200/475 (42%), Gaps = 35/475 (7%)

Query: 201  SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
            SIL +   +    ++ + A  +GY     +  +++ AY + G  ++ +S+   ++++   
Sbjct: 577  SILIKAECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPN 636

Query: 261  P-NLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
              NL++  +++  C  G  VD          + R     D   +  L+       L+  A
Sbjct: 637  SHNLISECSIMLLCKNGKIVDAIQEYSRKQMLKRGSFGQDCDLYEYLITYLEEAELFPEA 696

Query: 319  RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST-MID 377
              +F +M   GI      + + +   C+    + A+++M +    +IS N+++    MI+
Sbjct: 697  CQVFCDMQFLGIVPSQKVFPSFIFQCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIE 756

Query: 378  GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
             Y K      A N    +K    G+DR  +N ++  YA+ G +E A  +   M   G   
Sbjct: 757  AYGKLKLWQQAENFVKGLKQES-GVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLP 815

Query: 438  DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
               + N ++      G+ DE+  + ++++   +  +  T   +++ ++K G   E M+I+
Sbjct: 816  TVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIY 875

Query: 498  REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
               K AG   ++ LY  +I  LC N        ++ EM   G +P++V  N+++  +  +
Sbjct: 876  NGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGT 935

Query: 558  ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
               + T++     L      A L+      D+D      T N +I ++ +    + G   
Sbjct: 936  GNFDRTIEVYHSIL-----EAGLEP-----DED------TYNTLIVMYSRNFRPEEG--- 976

Query: 618  KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                          +  +M K  + P + ++  +L A  +   +E A +L EE+R
Sbjct: 977  ------------FTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMR 1019



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 3/154 (1%)

Query: 157  DDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF 216
            + Y  LL   G    W +A   F     +  R N    +   M+ I         A+++ 
Sbjct: 993  ESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRS--IYHMMMKIYRNARNHSKAEHLL 1050

Query: 217  ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
                 +G   T+     L+++YG SG+  EA  V NS+K  NL+ + + Y+ V+DA  + 
Sbjct: 1051 SAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRN 1110

Query: 277  GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCS 310
              D+   +    +M R+GV+PD   + S +   S
Sbjct: 1111 R-DYSLGITKLLEMKRDGVEPDHQVWTSFIRAAS 1143


>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
 gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
          Length = 713

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 198/369 (53%), Gaps = 1/369 (0%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G + ++++    + G ++  + +      EG+   +  ++ +++ +      ++ +S F+
Sbjct: 236 GIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFH 295

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            +K   L P   TY  ++    K G +    ++I ++M ++GV P+++ +  ++   +RG
Sbjct: 296 RLKACGLSPTAATYGCIVKLFTKAG-NMAKALDILEEMDKHGVSPNKMIYAMIMDGYARG 354

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G + AA  ++ +MV  G+  DI TYN L+ A CK  +MD A  ++  + A  + P + TY
Sbjct: 355 GDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETY 414

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           ++++DGY K G +  AL +F  +K  G+    VSYN++LS  AK  + E A L+  EM +
Sbjct: 415 TSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLA 474

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           +G+  +  +Y AL  GY + G  ++   MF++MK + ++ +++ Y  L+    K G  + 
Sbjct: 475 NGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQR 534

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A+++F++   AGLK + + Y  ++D   + G +  A  LL +M K G   + + Y S I 
Sbjct: 535 AVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIK 594

Query: 553 AFGRSATTE 561
           A  RS  TE
Sbjct: 595 ACFRSGDTE 603



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/544 (24%), Positives = 248/544 (45%), Gaps = 70/544 (12%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +  L+  Y R G    A + F +M+  ++KPN+  Y ++I A  +   D +  V   ++M
Sbjct: 134 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEA-RDMEGAVACTEEM 192

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           L  G+Q +   F S+++  +  G  EAA + F +     +      YN+++ A C+   M
Sbjct: 193 LSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNM 252

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYA------------------------------ 380
           +    ++A+M  +    N+  Y+T+++G+A                              
Sbjct: 253 ETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCI 312

Query: 381 -----KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
                KAG +  AL++  EM   G+  +++ Y  ++  YA+ G F  A  V ++M S+G+
Sbjct: 313 VKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGL 372

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D VTYN L+  + K G+ D+   + E ++A+ + P + TY++++D Y KGG  ++A++
Sbjct: 373 KPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALE 432

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F   K AGL+  VV Y++L+  L K   +E+A  +LDEM   G+ PN  +Y ++ + + 
Sbjct: 433 VFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYA 492

Query: 556 RSATTECTVDDVERDLG----KQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
           R+        DVE+  G     +KE+  +D +                + ++VF Q+   
Sbjct: 493 RAG-------DVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQIT-- 543

Query: 612 KAGQGKKENRC-----------RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
               G K NR            + E+     + + M K     + + +++ + AC R   
Sbjct: 544 --DAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGD 601

Query: 661 FEDASMLLEELRLFDNQVYG-----VAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAF 715
            E+ +  L  +R    +V       + HG L     +   QA+S +++ K       SA 
Sbjct: 602 TEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPD---QAISCYEQAKASGLQLDSAL 658

Query: 716 YNAL 719
            N L
Sbjct: 659 SNCL 662



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 178/369 (48%), Gaps = 3/369 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++ +  + G +  A +I E     G       ++ ++  Y R G    A  V+  M    
Sbjct: 312 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 371

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           LKP++VTYN ++ A C  G +D    + + +++  N + P   T+ S+L    +GG  + 
Sbjct: 372 LKPDIVTYNILVHAFCKAGRMD--KALGVLENIQANRLLPTIETYTSILDGYVKGGHIQK 429

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +F+ +   G+   + +YN+LL  + K  QM+ A  ++ EM A  + PN  +Y+ + +
Sbjct: 430 ALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTE 489

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GYA+AG ++ A  MF  MK   + +D V+Y  +L    K G  + A+ V +++  +G++ 
Sbjct: 490 GYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKH 549

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + +TY  +L G+ ++G+  + R + + M+      + + Y++ I    + G  +E  +  
Sbjct: 550 NRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETL 609

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
              ++  L+ +   Y+ LI         + A+S  ++    G++ +    N ++      
Sbjct: 610 AVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSGLISC 669

Query: 558 ATTECTVDD 566
           A+   T+ +
Sbjct: 670 ASQNSTLGE 678


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 183/348 (52%), Gaps = 1/348 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A  +F+    EG+   V  +  LI+   + G    AI    SM++ N +P +V Y
Sbjct: 138 GKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVY 197

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           + +ID+  K        + +F DML  G+ P+  T++SL+      G W+ A  LF  M+
Sbjct: 198 STIIDSLCKDR-QLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMI 256

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
           HR I  D  T+NTL+DA+CK   +  A  ++  M   ++ P+VVTY++++DG+     + 
Sbjct: 257 HRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMG 316

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
             +N+F  M   G     +SY T+++ Y K+   ++A+ + +EM   G+  D VTYN L+
Sbjct: 317 KTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLI 376

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G    G+  +   +F +M      P+L+TY  L D   K     EAM + +  +   L 
Sbjct: 377 HGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLD 436

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            D+ +YS ++D +C+ G +E+A  L  +++ +G+ P+V TY  +I+  
Sbjct: 437 PDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGL 484



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 206/419 (49%), Gaps = 5/419 (1%)

Query: 142 LGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           LGDILK   ++   A  +T L+R L   G+  +A+Q F   +  E  + D     + +I+
Sbjct: 112 LGDILK-LGYQPSTAT-FTTLIRGLCVEGKIGEALQLFD-KMTGEGFQPDVLTYGT-LIN 167

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            L ++G    A     +        TV  +S +I +  +     EA+S+F+ M    + P
Sbjct: 168 GLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISP 227

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           N  TY+++I      G  +K  + +F  M+   + PD++TFN+L+    + G+   A  +
Sbjct: 228 NNFTYSSLIHGLCILG-HWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYV 286

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            + M+   +  D+ TYN+L+D  C  ++M     +   M  K   P+V++Y+T+I+GY K
Sbjct: 287 VDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCK 346

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
              +D A+ +F EM   G+  D V+YNT++     +GR  +A+ +  EM   G   D VT
Sbjct: 347 IQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVT 406

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  L     K  +  E   + + ++   + P++  YS ++D   + G  + A  +F +  
Sbjct: 407 YRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLS 466

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
             GL  DV  Y+ +I+ LC+ GL+  A  L  EM + G  PN  TYN I   F R+  T
Sbjct: 467 SKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNET 525



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 249/558 (44%), Gaps = 81/558 (14%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           +D A ++F   L      ++  FS L+++  R  +    +S++  M  + +  N  T N 
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           +I++ C    + F     +  D+L+ G QP   TF +L+  +C  G + EA + LF++M 
Sbjct: 95  LINSFCHLNRLGFA--FSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQ-LFDKMT 151

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G   D+ TY TL++ +CK      A   +  M  +N  P VV YST+ID   K  +L 
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL---------------------- 424
           +AL++FS+M   GI  +  +Y++++     LG ++EA+                      
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271

Query: 425 -LVCKE------------MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
             +CKE            M  S ++ D VTYN+L+ G+  + +  +   +F+ M      
Sbjct: 272 DALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCV 331

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P++++Y+TLI+ Y K  +  +AM +F E  Q GL  D V Y+ LI  LC  G +  A++L
Sbjct: 332 PSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 391

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRS-ATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
             EM   G  P++VTY  + D   ++    E  V      L K  E  NLD         
Sbjct: 392 FHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMV------LLKVIEGTNLDP-------- 437

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFS 649
                  D  I  +              +  CR  E+     +F K+    + P+V T++
Sbjct: 438 -------DIHIYSIV------------MDGMCRAGELEAARDLFSKLSSKGLHPDVRTYT 478

Query: 650 AILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVK-- 705
            ++N   +     +AS L  E+           + L+  G+ R+N  ++A+ LF E+   
Sbjct: 479 IMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSR 538

Query: 706 --LMDSSTASAFYNALTD 721
              +D ST +     L+D
Sbjct: 539 GFSIDVSTTTLLVEMLSD 556



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 202/398 (50%), Gaps = 11/398 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKVDLAKNIF 216
           Y  L+  L   G  S AI+     ++  E++N +  +   S +I  L +  ++  A ++F
Sbjct: 162 YGTLINGLCKVGNTSTAIR----FLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLF 217

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
              L +G     + +S+LI      G+ +EAI +F +M    + P+ +T+N ++DA C +
Sbjct: 218 SDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKE 277

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           G V   H V   D M+++ ++PD +T+NSL+   C R  + +   N+F+ MV +G    +
Sbjct: 278 GMVVKAHYV--VDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTV-NVFDTMVRKGCVPSV 334

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            +Y TL++  CK   MD A  +  EM  + + P+ VTY+T+I G    GRL DA+ +F E
Sbjct: 335 ISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHE 394

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G   D V+Y  +     K  R  EA+++ K +E + +  D   Y+ ++ G  + G+
Sbjct: 395 MVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGE 454

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            +  R +F ++ +  + P++ TY+ +I+   + GL  EA ++F E  + G   +   Y+ 
Sbjct: 455 LEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNL 514

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           +     +N     A+ L  EM   G   +V T   +++
Sbjct: 515 ITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVE 552



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 193/421 (45%), Gaps = 45/421 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +++ + R+       ++++   + G  +  Y  + LI+++        A SV   + +
Sbjct: 58  SKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILK 117

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
              +P+  T+  +I   C +G +     +++FD M   G QPD +T+ +L+  +C  G  
Sbjct: 118 LGYQPSTATFTTLIRGLCVEGKIG--EALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNT 175

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             A R L   M  R     +  Y+T++D++CK  Q+  A  + ++M AK ISPN  TYS+
Sbjct: 176 STAIRFL-RSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSS 234

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I G    G   +A+ +F  M    I  D++++NT++    K G   +A  V   M  S 
Sbjct: 235 LIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSD 294

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++ D VTYN+L+ G+  + +  +   +F+ M      P++++Y+TLI+ Y K  +  +AM
Sbjct: 295 LKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAM 354

Query: 495 QIFREFKQAGLKADVVLYSALI-----------------------------------DAL 519
            +F E  Q GL  D V Y+ LI                                   D L
Sbjct: 355 GLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYL 414

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
           CKN  +  A+ LL  +    + P++  Y+ ++D   R+   E       RDL  +  S  
Sbjct: 415 CKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELE-----AARDLFSKLSSKG 469

Query: 580 L 580
           L
Sbjct: 470 L 470



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 211/453 (46%), Gaps = 35/453 (7%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           + +F+ MLR    P  + F+ LL   +R   +    +L+ +M   GI  + +T N L+++
Sbjct: 39  LSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINS 98

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C   ++  AF ++ ++      P+  T++T+I G    G++ +AL +F +M   G   D
Sbjct: 99  FCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPD 158

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            ++Y T+++   K+G    A+   + ME    R   V Y+ ++    K  +  E   +F 
Sbjct: 159 VLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFS 218

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
            M A  +SPN  TYS+LI      G +KEA+++F       +  D + ++ L+DALCK G
Sbjct: 219 DMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEG 278

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
           +V  A  ++D M +  ++P+VVTYNS++D         C    +  ++GK       D M
Sbjct: 279 MVVKAHYVVDVMIQSDLKPDVVTYNSLMDG-------HC----LRSEMGKTVNV--FDTM 325

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQL-VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
                K    +  +   +I  + ++ + +KA                +G+F++M +  + 
Sbjct: 326 VR---KGCVPSVISYTTLINGYCKIQIMDKA----------------MGLFEEMSQQGLI 366

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSL 700
           P+ VT++ +++         DA  L  E+ ++      V + +L  Y  +++   +A+ L
Sbjct: 367 PDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVL 426

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
              ++  +       Y+ + D +   G+   A+
Sbjct: 427 LKVIEGTNLDPDIHIYSIVMDGMCRAGELEAAR 459



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 181/380 (47%), Gaps = 5/380 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ ++  L    + ++A+  F+  + +    N+     S++I  L  LG    A  +F  
Sbjct: 197 YSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFT--YSSLIHGLCILGHWKEAIRLFYA 254

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            ++         F+ L+ A  + G   +A  V + M + +LKP++VTYN+++D  C +  
Sbjct: 255 MIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRS- 313

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            +    V +FD M+R G  P  I++ +L+    +  + + A  LF EM  +G+  D  TY
Sbjct: 314 -EMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTY 372

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           NTL+  +C   ++  A  +  EM      P++VTY  + D   K  RL +A+ +   ++ 
Sbjct: 373 NTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEG 432

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             +  D   Y+ V+    + G  E A  +  ++ S G+  D  TY  ++ G  +QG   E
Sbjct: 433 TNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAE 492

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             ++F +M  +  SPN  TY+ +   + +      A+Q+F+E    G   DV   + L++
Sbjct: 493 ASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVE 552

Query: 518 ALCKNGLVESAVSLLDEMTK 537
            L  +GL +S   +L E  +
Sbjct: 553 MLSDDGLDQSVKQILCEFVQ 572


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 236/503 (46%), Gaps = 55/503 (10%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I ++ + G ++ AK +F+  +  G      A+++LI  Y R    ++   +   MK+ N+
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413

Query: 260 KPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             +  TY  V+   C  G +D  +   I  +M+ +G +P+ + + +L+    +   +  A
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAY--NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +  EM  +GI  DIF YN+L+  + K  +MD A   + EM    + PN  TY   I G
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y +A     A     EM+  G+  ++V    +++ Y K G+  EA    + M   GI  D
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           A TY  L+ G  K  K D+   +F +M+   ++P++ +Y  LI+ +SK G  ++A  IF 
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E  + GL  +V++Y+ L+   C++G +E A  LLDEM+ +G+ PN VTY +IID + +S 
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711

Query: 559 TTE----------------------------CTVDDVERDL--------GKQKESANLDA 582
                                          C ++DVER +        G    +A  +A
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNA 771

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI----LCILG------- 631
           + +     V + G+T+ +  +V  +L+     +  K N     I    LC  G       
Sbjct: 772 LINW----VFKFGKTELK-TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKE 826

Query: 632 VFQKMHKLKIKPNVVTFSAILNA 654
           +F +M    + P V+T++++LN 
Sbjct: 827 LFHQMQNANLMPTVITYTSLLNG 849



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 228/517 (44%), Gaps = 38/517 (7%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD A  + E+ + +G     Y +  LI    +    ++A S+   M    +  +  TY+ 
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           +ID   KG  +      +  +M+ +G+      ++  + V S+ G+ E A+ LF+ M+  
Sbjct: 318 LIDGLLKGR-NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G+      Y +L++  C+   +   +E++ EM  +NI  +  TY T++ G   +G LD A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            N+  EM   G   + V Y T++  + +  RF +A+ V KEM+  GI  D   YN+L+ G
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             K  + DE R    +M  + + PN  TY   I  Y +   +  A +  +E ++ G+  +
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            VL + LI+  CK G V  A S    M  +GI  +  TY  +++   ++      VDD E
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND----KVDDAE 612

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA--EKAGQGKKENRCRQEI 626
               + +                   G+     +  +G L+    K G  +K +      
Sbjct: 613 EIFREMR-------------------GKGIAPDVFSYGVLINGFSKLGNMQKAS------ 647

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
                +F +M +  + PNV+ ++ +L    R    E A  LL+E+ +       V +  +
Sbjct: 648 ----SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703

Query: 687 M-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
           + GY +     +A  LFDE+KL      S  Y  L D
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 179/373 (47%), Gaps = 44/373 (11%)

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           + LI+ Y + G   EA S + SM    +  +  TY  +++   K         EIF +M 
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND-KVDDAEEIFREMR 619

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
             G+ PD  ++  L+   S+ G  + A ++F+EMV  G+  ++  YN LL   C+  +++
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A E++ EM  K + PN VTY T+IDGY K+G L +A  +F EMK  G+  D   Y T++
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 412 SIYAKLGRFEEALLV-------C-------------------KEMESSGIRK-------- 437
               +L   E A+ +       C                    E+++  + +        
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799

Query: 438 ----DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
               + VTYN ++    K+G  +  + +F QM+   + P ++TY++L++ Y K G   E 
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM-----TKEGIRPNVVTYN 548
             +F E   AG++ D ++YS +I+A  K G+   A+ L+D+M       +G + ++ T  
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919

Query: 549 SIIDAFGRSATTE 561
           +++  F +    E
Sbjct: 920 ALLSGFAKVGEME 932



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 192/392 (48%), Gaps = 18/392 (4%)

Query: 191 DQGKLASA-----MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           DQG L  A     +++ L +  KVD A+ IF     +G    V+++  LI+ + + G  Q
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +A S+F+ M    L PN++ YN ++    + G + +   E+ D+M   G+ P+ +T+ ++
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG-EIEKAKELLDEMSVKGLHPNAVTYCTI 703

Query: 306 L-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           +   C  G L EA R LF+EM  +G+  D F Y TL+D  C+   ++ A  I      K 
Sbjct: 704 IDGYCKSGDLAEAFR-LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKG 761

Query: 365 ISPNVVTYSTMIDGYAKAGRLD---DALNMFSEMKFLGIGL-DRVSYNTVLSIYAKLGRF 420
            + +   ++ +I+   K G+ +   + LN   +  F   G  + V+YN ++    K G  
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           E A  +  +M+++ +    +TY +LL GY K G+  E+  +F++  A  + P+ + YS +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881

Query: 481 IDVYSKGGLYKEAM----QIF-REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           I+ + K G+  +A+    Q+F +     G K  +    AL+    K G +E A  +++ M
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
            +    P+  T   +I+    S+      D V
Sbjct: 942 VRLQYIPDSATVIELINESCISSNQRVEADAV 973



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 99/480 (20%), Positives = 197/480 (41%), Gaps = 115/480 (23%)

Query: 321 LFNEMVHRG-IDQDIFTYNT---------------LLDAICKGAQMDLAFEIMAEMPAKN 364
           LF+  + +G I++ +F +++               LLDA+ +  ++DL +++   M  +N
Sbjct: 157 LFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERN 216

Query: 365 ISPNVVTYSTMIDGYAKAG---------------------RLDDALNMFSEMKFLGIGLD 403
           +  +V TY  +I  + +AG                      +D AL +   M   G+   
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPL 276

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY-------------- 449
           + +Y+ ++    K+ R E+A  +  EM+S G+  D  TY+ L+ G               
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336

Query: 450 ---------------------GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
                                 K+G  ++ + +F+ M A  + P    Y++LI+ Y +  
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
             ++  ++  E K+  +      Y  ++  +C +G ++ A +++ EM   G RPNVV Y 
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456

Query: 549 SIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
           ++I  F +++       D  R L + KE     D  C             ++ II +   
Sbjct: 457 TLIKTFLQNS----RFGDAMRVLKEMKEQGIAPDIFC------------YNSLIIGL--- 497

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
                  + K+ +  R  ++       +M +  +KPN  T+ A ++     + F  A   
Sbjct: 498 ------SKAKRMDEARSFLV-------EMVENGLKPNAFTYGAFISGYIEASEFASADKY 544

Query: 668 LEELR---LFDNQVYGVAHGLLMGY-RDNIWVQALSLF----DEVKLMDSSTASAFYNAL 719
           ++E+R   +  N+V  +  GL+  Y +    ++A S +    D+  L D+ T +   N L
Sbjct: 545 VKEMRECGVLPNKV--LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 212/413 (51%), Gaps = 22/413 (5%)

Query: 163 LRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE 222
           LR L  RG+  +AI+        E   +  G  A A+I  L   G+   A+ +  +   +
Sbjct: 63  LRVLVRRGDLEEAIRLVESMAGLE--PSAAGPCA-ALIKKLCASGRTAEARRVLASCEPD 119

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
                V +++A+++ Y  +G    A  +  +M    ++P+  TYN +I   CG+G  D  
Sbjct: 120 -----VMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTD-- 169

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           + + + DDMLR G  PD +T+  LL A C R G  +A + L +EM  +G   DI TYN +
Sbjct: 170 NALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVK-LLDEMRDKGCAPDIVTYNVV 228

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           ++ IC+  ++D A E +  +P+    PN V+Y+ ++ G   A R +DA  + +EM   G 
Sbjct: 229 VNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGR 288

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             + V++N ++S   + G  E A+ +  ++   G   ++++YN +L  + KQ K D    
Sbjct: 289 PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 348

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
             E M +    P++++Y+TL+    +GG    A+++  + K  G    ++ Y+ +ID L 
Sbjct: 349 FVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLT 408

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE------CTVDDV 567
           K G  E A+ LL+EM  +G++P+++TY++I     R    E      C V D+
Sbjct: 409 KAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDM 461



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 183/356 (51%), Gaps = 6/356 (1%)

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY-GRSGYCQEAISVFNSMKRYNLK 260
           + GR G+ D A  + +  L  G    V  ++ L+ A   RSGY ++A+ + + M+     
Sbjct: 162 LCGR-GRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGY-KQAVKLLDEMRDKGCA 219

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           P++VTYN V++  C +G VD    +E    +   G +P+ +++N +L        WE A 
Sbjct: 220 PDIVTYNVVVNGICQEGRVD--DAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 277

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            L  EM  +G   ++ T+N L+  +C+   ++ A EI+ ++P    +PN ++Y+ ++  +
Sbjct: 278 KLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAF 337

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K  ++D A+     M   G   D VSYNT+L+   + G  + A+ +  +++  G     
Sbjct: 338 CKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVL 397

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           ++YN ++ G  K GK +E   +  +M    + P+++TYST+     + G  +EA++ F +
Sbjct: 398 ISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCK 457

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            +  G++ + VLY+A++  LCK     SA+ L   M   G  PN  TY  +I+   
Sbjct: 458 VQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLA 513



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 208/430 (48%), Gaps = 47/430 (10%)

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD-FKHVVEIFDD 289
           +ALI     SG   EA  V  S      +P++++YNA++   C  G +D  + +V     
Sbjct: 94  AALIKKLCASGRTAEARRVLAS-----CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP- 147

Query: 290 MLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
                ++PD  T+N+L+  +C RG   + A  + ++M+ RG   D+ TY  LL+A CK +
Sbjct: 148 -----MEPDTYTYNTLIRGLCGRGR-TDNALAVLDDMLRRGCVPDVVTYTILLEATCKRS 201

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
               A +++ EM  K  +P++VTY+ +++G  + GR+DDA+     +   G   + VSYN
Sbjct: 202 GYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYN 261

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            VL       R+E+A  +  EM   G   + VT+N L+    ++G  +    + +Q+   
Sbjct: 262 IVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKY 321

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
             +PN L+Y+ ++  + K      AM        +G   D+V Y+ L+ ALC+ G V++A
Sbjct: 322 GCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAA 381

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           V LL ++  +G  P +++YN++ID   ++              GK +E+  L+ +     
Sbjct: 382 VELLHQLKDKGCTPVLISYNTVIDGLTKA--------------GKTEEA--LELLNEMVT 425

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
           K +Q         I  +  + +    +G+ E          +  F K+  + I+PN V +
Sbjct: 426 KGLQPD-------IITYSTISSGLCREGRIEE--------AIKAFCKVQDMGIRPNTVLY 470

Query: 649 SAI-LNACSR 657
           +AI L  C R
Sbjct: 471 NAILLGLCKR 480



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 185/367 (50%), Gaps = 15/367 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-----SAMISILGRLGKVDLAK 213
           YT LL     R  + +A       VK  +   D+G        + +++ + + G+VD A 
Sbjct: 190 YTILLEATCKRSGYKQA-------VKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAM 242

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID-A 272
              ++  + G      +++ ++     +   ++A  +   M R    PN+VT+N +I   
Sbjct: 243 EFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFL 302

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C +G V+    +EI D + + G  P+ +++N +L    +    + A      MV  G   
Sbjct: 303 CRRGLVE--PAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYP 360

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           DI +YNTLL A+C+G ++D A E++ ++  K  +P +++Y+T+IDG  KAG+ ++AL + 
Sbjct: 361 DIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELL 420

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           +EM   G+  D ++Y+T+ S   + GR EEA+    +++  GIR + V YNA+L G  K+
Sbjct: 421 NEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKR 480

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
                   +F  M ++   PN  TY+ LI+  +  GL KEA ++  E    G+ +  ++ 
Sbjct: 481 RATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVN 540

Query: 513 SALIDAL 519
              I  L
Sbjct: 541 KGAIRLL 547



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 176/369 (47%), Gaps = 34/369 (9%)

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +PD +++N+++A     G  + AR L   M    ++ D +TYNTL+  +C   + D A  
Sbjct: 117 EPDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNALA 173

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++ +M  +   P+VVTY+ +++   K      A+ +  EM+  G   D V+YN V++   
Sbjct: 174 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGIC 233

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           + GR ++A+   K + S G   + V+YN +L G     ++++  ++  +M      PN++
Sbjct: 234 QEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVV 293

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           T++ LI    + GL + AM+I  +  + G   + + Y+ ++ A CK   ++ A++ ++ M
Sbjct: 294 TFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 353

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
              G  P++V+YN+++ A  R    +  V+ + +                  DK      
Sbjct: 354 VSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ----------------LKDKGCTPVL 397

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
            + N +I         KAG+ ++           L +  +M    ++P+++T+S I +  
Sbjct: 398 ISYNTVIDGL-----TKAGKTEEA----------LELLNEMVTKGLQPDIITYSTISSGL 442

Query: 656 SRCNSFEDA 664
            R    E+A
Sbjct: 443 CREGRIEEA 451



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 123/536 (22%), Positives = 226/536 (42%), Gaps = 80/536 (14%)

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF-TYNTLLDAICKGAQMDLAFEIMAEMP 361
           N  L V  R G  E A  L   M   G++         L+  +C   +   A  ++A   
Sbjct: 60  NDRLRVLVRRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRVLA--- 114

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
             +  P+V++Y+ M+ GY   G+LD+A  + + M    +  D  +YNT++      GR +
Sbjct: 115 --SCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTD 169

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
            AL V  +M   G   D VTY  LL    K+  Y +  ++ ++M+    +P+++TY+ ++
Sbjct: 170 NALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVV 229

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           +   + G   +AM+  +     G + + V Y+ ++  LC     E A  L+ EM+++G  
Sbjct: 230 NGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRP 289

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKDVQEA 594
           PNVVT+N +I    R    E  ++ +++ + K   + N       L A C Q   D   A
Sbjct: 290 PNVVTFNMLISFLCRRGLVEPAMEILDQ-IPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 348

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI---------LC----ILGVFQKMHKLKI 641
                     F +L+            C  +I         LC    +    + +H+LK 
Sbjct: 349 ----------FVELMVSSG--------CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 390

Query: 642 K---PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQ 696
           K   P +++++ +++  ++    E+A  LL E+     Q   + +  +     R+    +
Sbjct: 391 KGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEE 450

Query: 697 ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDL 756
           A+  F +V+ M     +  YNA+   L    ++R                   + S +DL
Sbjct: 451 AIKAFCKVQDMGIRPNTVLYNAI---LLGLCKRRA------------------THSAIDL 489

Query: 757 HL-MSSGAARAMVHAWLLNIHSIVFEG--HELPKLLSILTGWGKHSK-VVGDGALR 808
              M S         + + I  + +EG   E  ++++ L   G  SK +V  GA+R
Sbjct: 490 FTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVNKGAIR 545


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 236/503 (46%), Gaps = 55/503 (10%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I ++ + G ++ AK +F+  +  G      A+++LI  Y R    ++   +   MK+ N+
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413

Query: 260 KPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             +  TY  V+   C  G +D  +   I  +M+ +G +P+ + + +L+    +   +  A
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAY--NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +  EM  +GI  DIF YN+L+  + K  +MD A   + EM    + PN  TY   I G
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y +A     A     EM+  G+  ++V    +++ Y K G+  EA    + M   GI  D
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           A TY  L+ G  K  K D+   +F +M+   ++P++ +Y  LI+ +SK G  ++A  IF 
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E  + GL  +V++Y+ L+   C++G +E A  LLDEM+ +G+ PN VTY +IID + +S 
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711

Query: 559 TTE----------------------------CTVDDVERDL--------GKQKESANLDA 582
                                          C ++DVER +        G    +A  +A
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNA 771

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI----LCILG------- 631
           + +     V + G+T+ +  +V  +L+     +  K N     I    LC  G       
Sbjct: 772 LINW----VFKFGKTELK-TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKE 826

Query: 632 VFQKMHKLKIKPNVVTFSAILNA 654
           +F +M    + P V+T++++LN 
Sbjct: 827 LFHQMQNANLMPTVITYTSLLNG 849



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 228/517 (44%), Gaps = 38/517 (7%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD A  + E+ + +G     Y +  LI    +    ++A S+   M    +  +  TY+ 
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           +ID   KG  +      +  +M+ +G+      ++  + V S+ G+ E A+ LF+ M+  
Sbjct: 318 LIDGLLKGR-NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G+      Y +L++  C+   +   +E++ EM  +NI  +  TY T++ G   +G LD A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            N+  EM   G   + V Y T++  + +  RF +A+ V KEM+  GI  D   YN+L+ G
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             K  + DE R    +M  + + PN  TY   I  Y +   +  A +  +E ++ G+  +
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            VL + LI+  CK G V  A S    M  +GI  +  TY  +++   ++      VDD E
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND----KVDDAE 612

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA--EKAGQGKKENRCRQEI 626
               + +                   G+     +  +G L+    K G  +K +      
Sbjct: 613 EIFREMR-------------------GKGIAPDVFSYGVLINGFSKLGNMQKAS------ 647

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
                +F +M +  + PNV+ ++ +L    R    E A  LL+E+ +       V +  +
Sbjct: 648 ----SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703

Query: 687 M-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
           + GY +     +A  LFDE+KL      S  Y  L D
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 179/373 (47%), Gaps = 44/373 (11%)

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           + LI+ Y + G   EA S + SM    +  +  TY  +++   K         EIF +M 
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND-KVDDAEEIFREMR 619

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
             G+ PD  ++  L+   S+ G  + A ++F+EMV  G+  ++  YN LL   C+  +++
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A E++ EM  K + PN VTY T+IDGY K+G L +A  +F EMK  G+  D   Y T++
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 412 SIYAKLGRFEEALLV-------C-------------------KEMESSGIRK-------- 437
               +L   E A+ +       C                    E+++  + +        
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799

Query: 438 ----DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
               + VTYN ++    K+G  +  + +F QM+   + P ++TY++L++ Y K G   E 
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM-----TKEGIRPNVVTYN 548
             +F E   AG++ D ++YS +I+A  K G+   A+ L+D+M       +G + ++ T  
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919

Query: 549 SIIDAFGRSATTE 561
           +++  F +    E
Sbjct: 920 ALLSGFAKVGEME 932



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 192/392 (48%), Gaps = 18/392 (4%)

Query: 191 DQGKLASA-----MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           DQG L  A     +++ L +  KVD A+ IF     +G    V+++  LI+ + + G  Q
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +A S+F+ M    L PN++ YN ++    + G + +   E+ D+M   G+ P+ +T+ ++
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG-EIEKAKELLDEMSVKGLHPNAVTYCTI 703

Query: 306 L-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           +   C  G L EA R LF+EM  +G+  D F Y TL+D  C+   ++ A  I      K 
Sbjct: 704 IDGYCKSGDLAEAFR-LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKG 761

Query: 365 ISPNVVTYSTMIDGYAKAGRLD---DALNMFSEMKFLGIGL-DRVSYNTVLSIYAKLGRF 420
            + +   ++ +I+   K G+ +   + LN   +  F   G  + V+YN ++    K G  
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           E A  +  +M+++ +    +TY +LL GY K G+  E+  +F++  A  + P+ + YS +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881

Query: 481 IDVYSKGGLYKEAM----QIF-REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           I+ + K G+  +A+    Q+F +     G K  +    AL+    K G +E A  +++ M
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
            +    P+  T   +I+    S+      D V
Sbjct: 942 VRLQYIPDSATVIELINESCISSNQRVEADAV 973



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 128/564 (22%), Positives = 231/564 (40%), Gaps = 96/564 (17%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           F  L   Y    Y +EA+ VF+S     L P L     ++DA  +         +++  M
Sbjct: 154 FGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWN-RLDLFWDVYKGM 212

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLF---------------------NEMVHRG 329
           +   V  D  T++ L+    R G  +  +++                        M+ +G
Sbjct: 213 VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKG 272

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +    +TY+ L+D +CK  +++ A  ++ EM +  +S +  TYS +IDG  K    D A 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            +  EM   GI +    Y+  + + +K G  E+A  +   M +SG+   A  Y +L+ GY
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 450 GKQ-----------------------------------GKYDEVRRMFEQMKADCVSPNL 474
            ++                                   G  D    + ++M A    PN+
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           + Y+TLI  + +   + +AM++ +E K+ G+  D+  Y++LI  L K   ++ A S L E
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 535 MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEA 594
           M + G++PN  TY + I  +  ++                 E A+ D       K+++E 
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEAS-----------------EFASADKYV----KEMREC 551

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
           G   N+++     L+ E   +GK    C          ++ M    I  +  T++ ++N 
Sbjct: 552 GVLPNKVLCT--GLINEYCKKGKVIEAC--------SAYRSMVDQGILGDAKTYTVLMNG 601

Query: 655 CSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWVQ-ALSLFDEVKLMDS 709
             + +  +DA  +  E+R      D   YGV   L+ G+     +Q A S+FDE+     
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGV---LINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 710 STASAFYNALTDMLWHFGQKRGAQ 733
           +     YN L       G+   A+
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAK 682


>gi|356532365|ref|XP_003534744.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 705

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/574 (25%), Positives = 272/574 (47%), Gaps = 46/574 (8%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F D ++     + I +N+ L    +   +E A  LF+EM+ RG+  D  T++TL+++   
Sbjct: 152 FRDKIKPSTDKEVILYNATLKAFRKSRDFEGAEKLFDEMLQRGVKPDNITFSTLINSARM 211

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
            A  D A E   +MP+    P+ +T S M+  YA+   +D AL+++   K     LD  +
Sbjct: 212 CALPDKAVEWFKKMPSFGCEPDAMTCSAMVSAYAQTNNVDMALSLYGRAKAEKWSLDAST 271

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           ++T++ +Y  LG + E L +  EM+  G++   VTYN LLG   +  K  + + ++++M 
Sbjct: 272 FSTLIKMYGVLGNYVECLRIFGEMKVLGVKPTVVTYNTLLGSLFRSKKSWQAKNVYKEMI 331

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           ++ VSP+ +TY+TL+ +Y+     ++A+ +++E K  G+   V LY+ L+D     G +E
Sbjct: 332 SNGVSPDFITYATLLRIYAGAQYREDALSVYKEMKGNGMDMTVDLYNRLLDMCADVGCIE 391

Query: 527 SAVSLLDEMTKEGI-RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
            AV + ++M   G  +P+ +T++S+I  +       C         GK  E+  +     
Sbjct: 392 EAVEIFEDMKSSGTCQPDSLTFSSLITVYS------CN--------GKVSEAEGM----- 432

Query: 586 QDDKDVQEAGRTDNQ-IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
                + E  ++  Q  I V   LV +  G+ K+ +        ++ +F+++  L I P+
Sbjct: 433 -----LNEMIQSGFQPTIYVLTSLV-QCYGRAKQTDD-------VVKIFKQLLDLGIVPD 479

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYR--DNIWVQALSLFD 702
           V     +LN  ++    E+   L + +   + ++  V   L+ G     +   +A  L +
Sbjct: 480 VYFCCCLLNVMTQTPK-EEFGKLTDCIEKANTRLGSVVRYLVEGQEGDGDFRKEASELLN 538

Query: 703 EVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVW--SESCLDLHL-- 758
            +   D        N L D+         A+ V+  G   ++++N+   SE+   LHL  
Sbjct: 539 SI---DFKVKKPLCNCLIDLCVSLNAPNRARDVLDLGLMLEIYKNIQSRSETQWSLHLKK 595

Query: 759 MSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGM 818
           +S GAA   +H W+ ++   +    +LP LL + TG GKH     D  L    E  L  +
Sbjct: 596 LSVGAAITALHVWINDLSKALESWEDLPPLLGVNTGQGKHK--YSDKGLASVFESHLREL 653

Query: 819 GAPFWVANCNLGRFISTGPMVASWLRESGTLKVL 852
            APF  A    G F+ T     SWL   G+ + +
Sbjct: 654 NAPFHQAPDKAGWFLVTKEAAKSWLESRGSAETI 687



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 151/329 (45%), Gaps = 41/329 (12%)

Query: 256 RYNLKPN----LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
           R  +KP+    ++ YNA + A  K   DF+   ++FD+ML+ GV+PD ITF++L+     
Sbjct: 153 RDKIKPSTDKEVILYNATLKAFRKSR-DFEGAEKLFDEMLQRGVKPDNITFSTLINSARM 211

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
             L + A   F +M   G + D  T + ++ A  +   +D+A  +     A+  S +  T
Sbjct: 212 CALPDKAVEWFKKMPSFGCEPDAMTCSAMVSAYAQTNNVDMALSLYGRAKAEKWSLDAST 271

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS------------------- 412
           +ST+I  Y   G   + L +F EMK LG+    V+YNT+L                    
Sbjct: 272 FSTLIKMYGVLGNYVECLRIFGEMKVLGVKPTVVTYNTLLGSLFRSKKSWQAKNVYKEMI 331

Query: 413 ----------------IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
                           IYA     E+AL V KEM+ +G+      YN LL      G  +
Sbjct: 332 SNGVSPDFITYATLLRIYAGAQYREDALSVYKEMKGNGMDMTVDLYNRLLDMCADVGCIE 391

Query: 457 EVRRMFEQMKAD-CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           E   +FE MK+     P+ LT+S+LI VYS  G   EA  +  E  Q+G +  + + ++L
Sbjct: 392 EAVEIFEDMKSSGTCQPDSLTFSSLITVYSCNGKVSEAEGMLNEMIQSGFQPTIYVLTSL 451

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNV 544
           +    +    +  V +  ++   GI P+V
Sbjct: 452 VQCYGRAKQTDDVVKIFKQLLDLGIVPDV 480



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 124/251 (49%), Gaps = 2/251 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SAM+S   +   VD+A +++  A  E +      FS LI  YG  G   E + +F  MK 
Sbjct: 238 SAMVSAYAQTNNVDMALSLYGRAKAEKWSLDASTFSTLIKMYGVLGNYVECLRIFGEMKV 297

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +KP +VTYN ++ +  +    ++    ++ +M+ NGV PD IT+ +LL + +     E
Sbjct: 298 LGVKPTVVTYNTLLGSLFRSKKSWQ-AKNVYKEMISNGVSPDFITYATLLRIYAGAQYRE 356

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYSTM 375
            A +++ EM   G+D  +  YN LLD       ++ A EI  +M +     P+ +T+S++
Sbjct: 357 DALSVYKEMKGNGMDMTVDLYNRLLDMCADVGCIEEAVEIFEDMKSSGTCQPDSLTFSSL 416

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I  Y+  G++ +A  M +EM   G         +++  Y +  + ++ + + K++   GI
Sbjct: 417 ITVYSCNGKVSEAEGMLNEMIQSGFQPTIYVLTSLVQCYGRAKQTDDVVKIFKQLLDLGI 476

Query: 436 RKDAVTYNALL 446
             D      LL
Sbjct: 477 VPDVYFCCCLL 487



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 135/257 (52%), Gaps = 4/257 (1%)

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           SA++SAY ++     A+S++   K      +  T++ +I   G  G ++   + IF +M 
Sbjct: 238 SAMVSAYAQTNNVDMALSLYGRAKAEKWSLDASTFSTLIKMYGVLG-NYVECLRIFGEMK 296

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM- 350
             GV+P  +T+N+LL    R      A+N++ EM+  G+  D  TY TLL  I  GAQ  
Sbjct: 297 VLGVKPTVVTYNTLLGSLFRSKKSWQAKNVYKEMISNGVSPDFITYATLL-RIYAGAQYR 355

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL-DRVSYNT 409
           + A  +  EM    +   V  Y+ ++D  A  G +++A+ +F +MK  G    D +++++
Sbjct: 356 EDALSVYKEMKGNGMDMTVDLYNRLLDMCADVGCIEEAVEIFEDMKSSGTCQPDSLTFSS 415

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++++Y+  G+  EA  +  EM  SG +       +L+  YG+  + D+V ++F+Q+    
Sbjct: 416 LITVYSCNGKVSEAEGMLNEMIQSGFQPTIYVLTSLVQCYGRAKQTDDVVKIFKQLLDLG 475

Query: 470 VSPNLLTYSTLIDVYSK 486
           + P++     L++V ++
Sbjct: 476 IVPDVYFCCCLLNVMTQ 492


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/495 (29%), Positives = 237/495 (47%), Gaps = 52/495 (10%)

Query: 266 YNAVIDACGKGGVDFKHVVEIF-DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           YN V+ +  + G D    +EIF  +M R+GV P  +T+N+++    +     A   LF E
Sbjct: 4   YNIVLQSLCRAG-DTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEE 62

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           +V RG   D+ TYNTL+D++CK   ++ A  +  +M ++   PNVVTYS +I+G  K GR
Sbjct: 63  LVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGR 122

Query: 385 LDDALNMFSEM--KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR--KDAV 440
           +D+A  +  EM  K   +  + ++YN+ L    K     EA  + + +    +R   D V
Sbjct: 123 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 182

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           T++ L+ G  K G+ DE   +F+ M A    PN++TY+ L++   K    + A  +    
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 242

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV-----VTYNSIIDAFG 555
              G+  DV+ YS L+DA CK   V+ A+ LL  M   G  PNV     VT+N +I    
Sbjct: 243 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGAC 302

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
           ++   E             + SA  + M +   K++Q         +  FG L+      
Sbjct: 303 KAGNFE-------------QASALFEEMVA---KNLQPD-------VMTFGALIDGLCKA 339

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR--- 672
           G+ E    ++IL ++G       L + PNVVT++A+++   +    E+A   LEE+    
Sbjct: 340 GQVEA--ARDILDLMG------NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 391

Query: 673 -LFDNQVYG-VAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKR 730
            + D+  YG + + L    R +    AL L  E+K       +  YN L D LW  G+  
Sbjct: 392 CVPDSITYGSLVYALCRASRTD---DALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTE 448

Query: 731 GAQLVVLE--GKRRQ 743
            A  V+ E  GK  Q
Sbjct: 449 QAITVLEEMVGKGHQ 463



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 213/416 (51%), Gaps = 17/416 (4%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           DY  +L+ L   G+ ++A++ F   + R+          + +I+ L +   +     +FE
Sbjct: 3   DYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTY-NTIINGLCKSNDLGAGMELFE 61

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKG 276
             +  G+   V  ++ LI +  ++G  +EA  +   M      PN+VTY+ +I+  C  G
Sbjct: 62  ELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVG 121

Query: 277 GVDFKHVVEIFDDMLRNG--VQPDRITFNSLL-AVCSRGGLWEAA---RNLFNEMVHRGI 330
            +D     E+  +M R    V P+ IT+NS L  +C +    EA    R+L +  +   +
Sbjct: 122 RID--EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR--V 177

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             D  T++TL+D +CK  Q+D A  +  +M A    PNV+TY+ +++G  KA +++ A  
Sbjct: 178 SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHA 237

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG-----IRKDAVTYNAL 445
           M   M   G+  D ++Y+ ++  + K  R +EAL +   M S G     +  D VT+N L
Sbjct: 238 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNIL 297

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K G +++   +FE+M A  + P+++T+  LID   K G  + A  I       G+
Sbjct: 298 IAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 357

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             +VV Y+AL+  LCK+G +E A   L+EM   G  P+ +TY S++ A  R++ T+
Sbjct: 358 PPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 413



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 180/344 (52%), Gaps = 8/344 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L + G++D A ++F+  +  GY   V  ++AL++   ++   + A ++  SM  
Sbjct: 185 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 244

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQP-----DRITFNSLLAVCS 310
             + P+++TY+ ++DA C    VD    +E+   M   G  P     D++TFN L+A   
Sbjct: 245 KGVTPDVITYSVLVDAFCKASRVD--EALELLHGMASRGCTPNVLVPDKVTFNILIAGAC 302

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           + G +E A  LF EMV + +  D+ T+  L+D +CK  Q++ A +I+  M    + PNVV
Sbjct: 303 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 362

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TY+ ++ G  K+GR+++A     EM   G   D ++Y +++    +  R ++AL +  E+
Sbjct: 363 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 422

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           +S G   D VTYN L+ G  K GK ++   + E+M      P+  T++       + G  
Sbjct: 423 KSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNL 482

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
              M++ R     G+  D    S+++D +C++G ++   +++ E
Sbjct: 483 AGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 178/344 (51%), Gaps = 12/344 (3%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           FS LI    + G   EA SVF+ M      PN++TYNA+++  C    ++  H   + + 
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHA--MIES 241

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF-----TYNTLLDAI 344
           M+  GV PD IT++ L+    +    + A  L + M  RG   ++      T+N L+   
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGA 301

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK    + A  +  EM AKN+ P+V+T+  +IDG  KAG+++ A ++   M  LG+  + 
Sbjct: 302 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 361

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V+YN ++    K GR EEA    +EM SSG   D++TY +L+    +  + D+  ++  +
Sbjct: 362 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSE 421

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           +K+    P+ +TY+ L+D   K G  ++A+ +  E    G + D   ++A    L ++G 
Sbjct: 422 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGN 481

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
           +   + LL  +  +G+ P+  T +SI+D   RS      +DDV+
Sbjct: 482 LAGTMELLRVVLAKGMLPDATTCSSILDWVCRSG----KLDDVK 521


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/331 (34%), Positives = 176/331 (53%), Gaps = 11/331 (3%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKR--YNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
           +   + ++    + G  Q+AI   +   R  +   PN VTYN + DAC + G D     +
Sbjct: 203 IVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVG-DIDMACQ 261

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE-----MVHRGIDQDIFTYNTL 340
           I + M + GV P+ IT N+++    R G   AA + F E     +  RG   +  TY+TL
Sbjct: 262 IVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARG---NAVTYSTL 318

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           + A      + LA E+  EM  +   P+ V Y TMI G  +AGRL DA N+ + MK  G 
Sbjct: 319 VSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGF 378

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
            LDR +YN ++  + +  R  EA  + +EM+ +G++ D  TYN LL    K G +  V  
Sbjct: 379 KLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDE 438

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +   M  D   P+++T+ TL+  Y K G   EA++IFR   +A ++ + V+Y+ LID LC
Sbjct: 439 LLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLC 498

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           K+  V+ A+ L DEM +  +  NV TYN+++
Sbjct: 499 KSREVDVAIKLFDEMRENNVPANVTTYNALL 529



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 191/405 (47%), Gaps = 45/405 (11%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGY-GNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           AS +  +L R      A +    +L  G     V  F++L+SA GR+G  +    +F SM
Sbjct: 98  ASLLSKLLARFSSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSM 157

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG--VQPDRITFNSLL-AVCSR 311
           +  ++KP++VTY  +++   K G+     +++ D M   G  V  D +  N+++  +C  
Sbjct: 158 REASVKPDIVTYGILLNRLCKAGL-VGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKI 216

Query: 312 GGLWEAARNLFNEM--VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
           G L +A   +   M  VH G   +  TYN L DA C+   +D+A +I+  M  + ++PNV
Sbjct: 217 GRLQDAIVFVDERMRQVH-GCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNV 275

Query: 370 VTYSTMIDGYAKAGRLDDALN-------------------------------------MF 392
           +T +T++ G  + GR+  AL+                                     +F
Sbjct: 276 ITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELF 335

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            EM   G   D V Y T++S   + GR  +A  +   M+ +G + D   YN L+GG+ ++
Sbjct: 336 HEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRK 395

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
            +  E  ++FE+MK   + P++ TY+TL+    K G +    ++       G +  VV +
Sbjct: 396 KRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTF 455

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
             L+   CK G  + A+ +   M +  I+PN V YN++ID   +S
Sbjct: 456 GTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKS 500



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 209/455 (45%), Gaps = 44/455 (9%)

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           P++ T+N+++ A G+ G + + + E+F  M    V+PD +T+  LL    + GL   A  
Sbjct: 129 PDVSTFNSLLSALGRAG-NLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALK 187

Query: 321 LFNEMVHRGID--QDIFTYNTLLDAICKGAQMDLAFEIMAEM--PAKNISPNVVTYSTMI 376
           + + M   G D   DI   NT++D +CK  ++  A   + E        +PN VTY+ + 
Sbjct: 188 VLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLA 247

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI- 435
           D   + G +D A  +   M+  G+  + ++ NT++    ++GR   AL   +E  ++ + 
Sbjct: 248 DACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLE 307

Query: 436 -RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
            R +AVTY+ L+  +           +F +M      P+ + Y T+I   ++ G   +A 
Sbjct: 308 ARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDAC 367

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            I    K+AG K D   Y+ LI   C+   +  A  L +EM   G++P+V TYN+++   
Sbjct: 368 NIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCL 427

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            ++      VD++   LG       +D  C                 +  FG LV     
Sbjct: 428 CKAGDFS-AVDEL---LGNM-----IDDGCQPS--------------VVTFGTLVHGYCK 464

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
            GK +          L +F+ M + +I+PN V ++ +++   +    + A  L +E+R  
Sbjct: 465 AGKTDE--------ALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMR-- 514

Query: 675 DNQVYG---VAHGLLMGYRD-NIWVQALSLFDEVK 705
           +N V       + LL G +D N+  +A  L D++K
Sbjct: 515 ENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMK 549



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 155/343 (45%), Gaps = 15/343 (4%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL--KPN 262
           R+G +D+A  I E    EG    V   + ++    R G    A+  F   +   L  + N
Sbjct: 252 RVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGN 311

Query: 263 LVTYNAVIDACGKGGVDFKHV------VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            VTY+ ++ A       F H       +E+F +M   G  PD + + ++++  ++ G   
Sbjct: 312 AVTYSTLVSA-------FLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLV 364

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A N+   M   G   D   YN L+   C+  ++  A ++  EM    + P+V TY+T++
Sbjct: 365 DACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLL 424

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
               KAG       +   M   G     V++ T++  Y K G+ +EAL + + M  + I+
Sbjct: 425 SCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQ 484

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + V YN L+    K  + D   ++F++M+ + V  N+ TY+ L+       + ++A ++
Sbjct: 485 PNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFEL 544

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
             + K+     D V    L++ L + G  E     +++  ++G
Sbjct: 545 MDQMKEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQRDEKG 587



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 91/204 (44%), Gaps = 31/204 (15%)

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D    + + + A   +P++ T+++L+    + G  +   ++F   ++A +K D+V Y  L
Sbjct: 113 DAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGIL 172

Query: 516 IDALCKNGLVESAVSLLDEMTKEG--IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           ++ LCK GLV  A+ +LD M+  G  +  ++V  N+++D         C +  ++     
Sbjct: 173 LNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGL-------CKIGRLQ----- 220

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
                  DA+   D++  Q  G   N +   +  L       G  +  C+        + 
Sbjct: 221 -------DAIVFVDERMRQVHGCAPNTV--TYNCLADACCRVGDIDMACQ--------IV 263

Query: 634 QKMHKLKIKPNVVTFSAILNACSR 657
           ++M K  + PNV+T + I+    R
Sbjct: 264 ERMEKEGVTPNVITMNTIVGGLCR 287


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 191/353 (54%), Gaps = 8/353 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A ++F+  + EG+   V  +  LI+   + G    AI +  SM++ N +P++V Y
Sbjct: 153 GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVY 212

Query: 267 NAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            ++ID+  K     + V E   +F  M+  G+ PD  T+ SL+        W+    L N
Sbjct: 213 TSIIDSLCKD----RQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLN 268

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           +M++  I  D+  ++T++DA+CK  ++  A +++  M  + + PNVVTY+ ++DG+    
Sbjct: 269 QMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQS 328

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            +D+A+ +F  M   G   + +SYNT+++ Y K+ R ++A  + +EM    +  + VTYN
Sbjct: 329 EMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYN 388

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+      G+  +   +F +M A    P+L TY  L+D   K     EAM + +  + +
Sbjct: 389 TLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS 447

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +  D+ +Y+ +ID +C+ G +E+A  +   ++ +G+RPNV TY  +I+   R
Sbjct: 448 NMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCR 500



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 209/421 (49%), Gaps = 19/421 (4%)

Query: 142 LGDILKKFEFKLCGAD------DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL 195
           +GD L  F+ K+ G         Y  L+  L   G  + AI+     ++  E+ N Q  +
Sbjct: 155 IGDALHLFD-KMIGEGFQPNVVTYGTLINGLCKVGNTNAAIR----LLRSMEQGNCQPDV 209

Query: 196 A--SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
              +++I  L +  +V  A N+F   + +G    ++ +++LI +       +   ++ N 
Sbjct: 210 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQ 269

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSR 311
           M    + P++V ++ V+DA C +G +   H  ++ D M+  GV+P+ +T+N+L+   C +
Sbjct: 270 MINSKIMPDVVIFSTVVDALCKEGKITEAH--DVVDMMIIRGVEPNVVTYNALMDGHCLQ 327

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
             + EA + +F+ MVH G   ++ +YNTL++  CK  +MD A  +  EM  K + PN VT
Sbjct: 328 SEMDEAVK-VFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 386

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+T++      GRL DA+ +F EM   G   D  +Y  +L    K    +EA+ + K +E
Sbjct: 387 YNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 445

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            S +  D   Y  ++ G  + G+ +  R +F  + +  + PN+ TY+ +I+   + GL  
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 505

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA ++F E    G   D   Y+ +   L +N     A+ LL EM   G   +V T   ++
Sbjct: 506 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 565

Query: 552 D 552
           +
Sbjct: 566 E 566



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 220/456 (48%), Gaps = 28/456 (6%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           F+ L+++  ++       S+ N M  + + P++ T N +I++ C    + F     +   
Sbjct: 72  FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGF--AFSVLAK 129

Query: 290 MLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +L+ G QPD  TF +L+  +C  G + +A  +LF++M+  G   ++ TY TL++ +CK  
Sbjct: 130 ILKLGHQPDTATFTTLIRGLCVEGKIGDAL-HLFDKMIGEGFQPNVVTYGTLINGLCKVG 188

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
             + A  ++  M   N  P+VV Y+++ID   K  ++ +A N+FS+M   GI  D  +Y 
Sbjct: 189 NTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYT 248

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           +++     L  ++    +  +M +S I  D V ++ ++    K+GK  E   + + M   
Sbjct: 249 SLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIR 308

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V PN++TY+ L+D +       EA+++F      G   +V+ Y+ LI+  CK   ++ A
Sbjct: 309 GVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKA 368

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDA--FGRSATTECTVDDVERDLGKQKESAN----LDA 582
             L +EM ++ + PN VTYN+++     GR         ++    G+  + A     LD 
Sbjct: 369 TYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHEMVAH-GQIPDLATYRILLDY 427

Query: 583 MCSQDDKDVQEA------GRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQK 635
           +C +   D   A      G   +  I+++  ++         +  CR  E+     +F  
Sbjct: 428 LCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVI---------DGMCRAGELEAARDIFSN 478

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +    ++PNV T++ ++N   R    ++A+ L  E+
Sbjct: 479 LSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 514



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 182/405 (44%), Gaps = 55/405 (13%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F+ ML     P  + FN LL   ++   +    +L N+M   GI  D++T N L+++ C 
Sbjct: 57  FNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCH 116

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  AF ++A++      P+  T++T+I G    G++ DAL++F +M   G   + V+
Sbjct: 117 LNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVT 176

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T+++   K+G    A+ + + ME    + D V Y +++    K  +  E   +F +M 
Sbjct: 177 YGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV 236

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              +SP++ TY++LI        +K    +  +   + +  DVV++S ++DALCK G + 
Sbjct: 237 GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKIT 296

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A  ++D M   G+ PNVVTYN++                             +D  C Q
Sbjct: 297 EAHDVVDMMIIRGVEPNVVTYNAL-----------------------------MDGHCLQ 327

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKL 639
            + D         + +KVF  +V                  C +        +F++M + 
Sbjct: 328 SEMD---------EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQK 378

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG 684
           ++ PN VT++ +++ C      +DA  L  E+         VAHG
Sbjct: 379 ELIPNTVTYNTLMHXC-HVGRLQDAIALFHEM---------VAHG 413



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 175/380 (46%), Gaps = 41/380 (10%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L N  EW          +  +   +    + S ++  L + GK+  A ++ + 
Sbjct: 247 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPD--VVIFSTVVDALCKEGKITEAHDVVDM 304

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +  G    V  ++AL+  +       EA+ VF++M      PN+++YN +I+  C    
Sbjct: 305 MIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQR 364

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D      +F++M +  + P+ +T+N+L+  C  G L +A   LF+EMV  G   D+ TY
Sbjct: 365 MD--KATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIA-LFHEMVAHGQIPDLATY 421

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             LLD +CK + +D A  ++  +   N+ P++  Y+ +IDG  +AG L+ A ++FS    
Sbjct: 422 RILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFS---- 477

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
                                           + S G+R +  TY  ++ G  ++G  DE
Sbjct: 478 -------------------------------NLSSKGLRPNVRTYTIMINGLCRRGLLDE 506

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             ++F +M  +  SP+  TY+T+     +      A+Q+ +E    G  ADV   + L++
Sbjct: 507 ANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 566

Query: 518 ALCKNGLVESAVSLLDEMTK 537
            LC + L +S   +L E  +
Sbjct: 567 MLCDDKLDQSVKQILSEFVQ 586



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 157/343 (45%), Gaps = 10/343 (2%)

Query: 223 GYGNTVYAFSALISAYGRSGY---------CQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
           G+G  V +     S+   + +           +A+S FN M   +  P+ V +N ++ + 
Sbjct: 20  GFGTCVLSLPPYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSI 79

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
            K    +  V  + + M   G+ PD  T N L+           A ++  +++  G   D
Sbjct: 80  AKTK-QYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPD 138

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             T+ TL+  +C   ++  A  +  +M  +   PNVVTY T+I+G  K G  + A+ +  
Sbjct: 139 TATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLR 198

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M+      D V Y +++    K  +  EA  +  +M   GI  D  TY +L+       
Sbjct: 199 SMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLC 258

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           ++  V  +  QM    + P+++ +ST++D   K G   EA  +       G++ +VV Y+
Sbjct: 259 EWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYN 318

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           AL+D  C    ++ AV + D M   G  PNV++YN++I+ + +
Sbjct: 319 ALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCK 361


>gi|449443502|ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Cucumis sativus]
 gi|449492820|ref|XP_004159111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Cucumis sativus]
          Length = 704

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 156/567 (27%), Positives = 277/567 (48%), Gaps = 50/567 (8%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F DML++  Q   I +N  L V  +    E A  LF EM++RG+  D  T++T++     
Sbjct: 169 FQDMLKSSKQ--TIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARL 226

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
            +    A E   +MP+ + +P+ VTYSTMID Y +AG +D A +++   +     +D  +
Sbjct: 227 CSLPSKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPAT 286

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           ++T++ I+   G ++  L V +EM++ GI+ + V YN LL   G+  +  +++ ++++M 
Sbjct: 287 FSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMI 346

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN-GLV 525
            +  SP+  TY++L+  Y +    ++A+ +++E K+ GL+ +V+LY+ L+ A+C + G V
Sbjct: 347 KNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLL-AMCADVGYV 405

Query: 526 ESAVSLLDEMTKEGI-RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
             AV +  +M   G   P+  T++S+I  +       C         GK  E+  +    
Sbjct: 406 NEAVEIFQDMKSSGTCSPDSWTFSSMITIYS------CG--------GKVSEAEEML--- 448

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
                D+ EAG   N  I V   L+ +  G+ K+ +        ++  F ++ +L + P+
Sbjct: 449 ----NDMVEAGFDPN--IFVLTSLI-QCYGKAKRVDD-------VVRTFNQLIELGLTPD 494

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRD---NIWVQALSLF 701
                 +LN  ++    E   ++   +R   N   G    LL+G +D   N   +A  LF
Sbjct: 495 DRFCGCLLNVITQTPKGELGKLIDCVVRA--NPKLGFVVELLLGEQDKEGNFRTEASELF 552

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES----CLDLH 757
               ++ +    A+ N L D+  +      A  ++  G   Q+++++ S S     L L 
Sbjct: 553 ---SVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRSPTQWSLYLK 609

Query: 758 LMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTG 817
            +S GAA   +H W+ ++  ++  G ELP LL I TG GKH     D  L    E  L  
Sbjct: 610 GLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHK--YSDKGLASVFESHLKE 667

Query: 818 MGAPFWVANCNLGRFISTGPMVASWLR 844
           + APF  A   +G F++T     SWL 
Sbjct: 668 LNAPFHEAPEKVGWFLTTKVAAKSWLE 694



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 201/446 (45%), Gaps = 25/446 (5%)

Query: 139 DVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASA 198
           +V + D+LK     +    D   +L  + N      A++ F   +K  +    Q    + 
Sbjct: 130 EVDVADVLKVIGNNIL-ERDAILVLNNMSNSQTALLALRYFQDMLKSSK----QTIFYNV 184

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            + +  +   ++ A+ +FE  +N G       FS +IS         +A+  F  M  ++
Sbjct: 185 TLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKMPSFD 244

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             P+ VTY+ +IDA G+ G +      ++D       + D  TF++++ +    G ++  
Sbjct: 245 CNPDDVTYSTMIDAYGRAG-NVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGC 303

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            N++ EM   GI  ++  YN LLDA+ +  +      I  EM     SP+  TY++++  
Sbjct: 304 LNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRA 363

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI-RK 437
           Y +A   +DAL ++ EMK  G+ L+ + YNT+L++ A +G   EA+ + ++M+SSG    
Sbjct: 364 YGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSP 423

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D+ T+++++  Y   GK  E   M   M      PN+   ++LI  Y K     + ++ F
Sbjct: 424 DSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF 483

Query: 498 REFKQAGLKADVVLYSALIDALCKN------GLVESAVS-----------LLDEMTKEG- 539
            +  + GL  D      L++ + +        L++  V            LL E  KEG 
Sbjct: 484 NQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDKEGN 543

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVD 565
            R       S++ A  R A   C +D
Sbjct: 544 FRTEASELFSVVSADVRKAYCNCLID 569



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 167/346 (48%), Gaps = 22/346 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S MI   GR G VD+A ++++ A  E +      FS +I  +G +G     ++V+  MK 
Sbjct: 253 STMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKA 312

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +KPNLV YN ++DA G+    ++ +  I+ +M++NG  P   T+ SLL    R    E
Sbjct: 313 IGIKPNLVIYNCLLDAMGRAKRPWQ-IKTIYKEMIKNGFSPSWATYASLLRAYGRARYGE 371

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYSTM 375
            A  ++ EM  +G+  ++  YNTLL        ++ A EI  +M +    SP+  T+S+M
Sbjct: 372 DALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPDSWTFSSM 431

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I  Y+  G++ +A  M ++M   G   +     +++  Y K  R ++ +    ++   G+
Sbjct: 432 ITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNQLIELGL 491

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV---SPNL-LTYSTLIDVYSKGGLYK 491
             D      LL    +  K  E+ ++      DCV   +P L      L+    K G ++
Sbjct: 492 TPDDRFCGCLLNVITQTPK-GELGKLI-----DCVVRANPKLGFVVELLLGEQDKEGNFR 545

Query: 492 -EAMQIFREFKQAGLKADV--VLYSALIDALCKN-GLVESAVSLLD 533
            EA ++F     + + ADV     + LID LC N  L++ A  LLD
Sbjct: 546 TEASELF-----SVVSADVRKAYCNCLID-LCVNLDLLDKACELLD 585


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 195/354 (55%), Gaps = 3/354 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I +  R G V  A N F + L  G+  +VY  + ++++  ++         F  M    
Sbjct: 111 LIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSR 170

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           + PN+ ++N +I   C +G    K  V I   M RNG  P  +++N+LL+ C + G ++ 
Sbjct: 171 VCPNVSSFNILISVLCVQG--KLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKF 228

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  L + M  +GI  D+ TYN  +D++C+ ++    + ++ +M  K I+PN V+Y+T+I+
Sbjct: 229 ALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLIN 288

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+ K G++  A  +F+EM  L +  + ++YN +++ Y   G FEEAL +   ME++ +R 
Sbjct: 289 GFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRP 348

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + VT   LL G  K  K+D  R + E+   +  S N ++++ +ID   + GL  EA Q+ 
Sbjct: 349 NEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLL 408

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            E  + G+  D++ +S LI+  CK G +  A  ++ ++ +EG  PN V ++++I
Sbjct: 409 IEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLI 462



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 176/360 (48%), Gaps = 6/360 (1%)

Query: 201 SILGRLGKVDLAKNIFETALNEGY---GNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           SIL  L + +   N     L + Y    +    F  LI  Y R G    A++ F+SM   
Sbjct: 75  SILKHLAQKNSGSNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIR 134

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVV-EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             KP++ T N ++ +  K      H+V   F  ML + V P+  +FN L++V    G  +
Sbjct: 135 GFKPSVYTCNMIMASMVKNCR--AHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLK 192

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A N+   M   G    I +YNTLL   CK  +   A  ++  M  K I  +V TY+  I
Sbjct: 193 KAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFI 252

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D   +  R      +  +M+   I  + VSYNT+++ + K G+   A  V  EM    + 
Sbjct: 253 DSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLS 312

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + +TYN L+ GY   G ++E  R+ + M+A+ V PN +T  TL++   K   +  A  I
Sbjct: 313 PNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNI 372

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
              +       + + ++ +ID LC+NGL++ A  LL EM K+G+ P+++T++ +I+ F +
Sbjct: 373 LERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCK 432



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 120/515 (23%), Positives = 225/515 (43%), Gaps = 72/515 (13%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           +++ LI+ + + G    A  VFN M   NL PNL+TYN +I+  C  G  +F+  + + D
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCING--NFEEALRLLD 339

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M  N V+P+ +T  +LL    +   ++ ARN+           +  ++  ++D +C+  
Sbjct: 340 VMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNG 399

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            +D AF+++ EM    + P+++T+S +I+G+ K G L+ A  + S++   G   + V ++
Sbjct: 400 LLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFS 459

Query: 409 TVLSIYAKLGRFEEAL---------------LVCKEMESS-------------------- 433
           T++    K+G   E +                 C  + +S                    
Sbjct: 460 TLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRI 519

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G+  ++VT++ ++ GY   G       +F++M +    P+  TY +L+ V  KG  + EA
Sbjct: 520 GLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEA 579

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            ++ ++     L  D + Y+ LI  + K+G +  AV L +EM +  I P+  TY  I+  
Sbjct: 580 RKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSG 639

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAM---CSQDD--------------KDVQEAGR 596
             R     C    + R +  QKE   L+++   C  D               K+++E G 
Sbjct: 640 LIREGRLVCAFIFLGRLM--QKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGL 697

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
           + + I      +    +  GK        +     +  K     + PN+ TF+ +L+  S
Sbjct: 698 SLDLI--ALNSITDGYSRMGK--------VFSASSLISKTRNKNVIPNLTTFNILLHGYS 747

Query: 657 RCNSFEDASMLLEELR---LFDNQVYGVAHGLLMG 688
           R         L   +R    F N++    H L++G
Sbjct: 748 RGQDIMSCFKLYNLMRRSGFFPNRL--TYHSLILG 780



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 184/374 (49%), Gaps = 19/374 (5%)

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
            F+ L+ V  R G+   A N F+ M+ RG    ++T N ++ ++ K  +  L +    +M
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQM 166

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
               + PNV +++ +I      G+L  A+N+ + M+  G     VSYNT+LS   K GRF
Sbjct: 167 LTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRF 226

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           + AL++   ME  GI+ D  TYN  +    +  +  +   + ++M+   ++PN ++Y+TL
Sbjct: 227 KFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTL 286

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I+ + K G    A ++F E  +  L  +++ Y+ LI+  C NG  E A+ LLD M    +
Sbjct: 287 INGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDV 346

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
           RPN VT  ++++   +SA       DV R++  ++ S N  ++ +     V   G   N 
Sbjct: 347 RPNEVTIGTLLNGLYKSAKF-----DVARNI-LERYSINRTSL-NCISHTVMIDGLCRNG 399

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEIL----CILG-------VFQKMHKLKIKPNVVTFS 649
           ++    QL+ E    G   +     +L    C +G       V  K+++    PN V FS
Sbjct: 400 LLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFS 459

Query: 650 AIL-NACSRCNSFE 662
            ++ N+C   N +E
Sbjct: 460 TLIYNSCKVGNVYE 473



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 125/544 (22%), Positives = 228/544 (41%), Gaps = 66/544 (12%)

Query: 216  FETALN-EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
            F  A+N  G     +  ++L+++   +G   EA    + + R  L PN VT++ +I+   
Sbjct: 477  FYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYA 536

Query: 275  KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG-GLWEA---------------- 317
              G D      +FD M+  G  P   T+ SLL V  +G   WEA                
Sbjct: 537  NVG-DGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDT 595

Query: 318  ------------------ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
                              A  LF EM+   I  D +TY  +L  + +  ++  AF  +  
Sbjct: 596  ISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGR 655

Query: 360  MPAKNI-SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
            +  K I + N + Y+  IDG  KAG+   AL +F EM+  G+ LD ++ N++   Y+++G
Sbjct: 656  LMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMG 715

Query: 419  RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
            +   A  +  +  +  +  +  T+N LL GY +        +++  M+     PN LTY 
Sbjct: 716  KVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYH 775

Query: 479  TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            +LI      G+ +  +++ + F       D + ++ LI   C+   ++  + L   M   
Sbjct: 776  SLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVF 835

Query: 539  GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK------QKESANLDAMCSQDDKDVQ 592
             +  +  T  ++ D   R   ++     +   L K      ++    +  MC     D+Q
Sbjct: 836  RVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVG--DIQ 893

Query: 593  EAGRTDNQIIKVFGQL--VAEKAGQGKKENRCRQEILC-----ILGVFQKMHKLKIKPNV 645
             A +  +Q++ +   L   AE A         R   LC      + + Q+M ++K  P  
Sbjct: 894  GAFKLKDQMVALGISLDDAAECA-------MVRGLALCGKIEEAMWILQRMLRMKKIPTT 946

Query: 646  VTFSAILNACSRCNSFEDA---SMLLEELRL-FDNQVYGVAHGLLMGYRDNIWVQALSLF 701
             TF+ +++   + ++F++A    +L+E  R+  D   Y V         D I   AL  +
Sbjct: 947  STFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVI--TALDFY 1004

Query: 702  DEVK 705
            +E+K
Sbjct: 1005 EEIK 1008



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 161/357 (45%), Gaps = 1/357 (0%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            +  I  L + G+   A  +F+    +G    + A +++   Y R G    A S+ +  + 
Sbjct: 670  TCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRN 729

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             N+ PNL T+N ++    +G  D     ++++ M R+G  P+R+T++SL+      G+ E
Sbjct: 730  KNVIPNLTTFNILLHGYSRGQ-DIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLE 788

Query: 317  AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
                +    +      D  T+N L+   C+   +D   ++   M    +S +  T   + 
Sbjct: 789  LGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVT 848

Query: 377  DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            D   +     +      EM   G       Y T++    ++G  + A  +  +M + GI 
Sbjct: 849  DVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGIS 908

Query: 437  KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             D     A++ G    GK +E   + ++M      P   T++TL+ V+ K   +KEA  +
Sbjct: 909  LDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL 968

Query: 497  FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
                +   +K D+V Y+ LI A C NG V +A+   +E+ ++G+ PN+ TY  ++ A
Sbjct: 969  KILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSA 1025


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 249/510 (48%), Gaps = 37/510 (7%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V  ++ +I  + + G   +A ++++ M +    P++VT+N++I+A C    VD   +  +
Sbjct: 116 VVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAEL--L 173

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M+ NGV P+++T+ S++   S  G WE A  +F EM  RG+  DI ++N+ +D++CK
Sbjct: 174 LRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCK 233

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +   A EI   M AK   PN+VTY  ++ GYA  G   D ++ F+ MK  GI  + + 
Sbjct: 234 HGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLV 293

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +  ++  YAK G  +EA+L+  EM+  G+  D  TY+ L+    + G+  +    F QM 
Sbjct: 294 FTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMI 353

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL-KADVVLYSALIDALCKNGLV 525
              V PN + Y +LI  +   G   +A ++  E    G+ + ++  +++++ ++CK G V
Sbjct: 354 GTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRV 413

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
             A  + D +   G R +++ +N++ID +       C V ++       K  + LDAM S
Sbjct: 414 MDAHHIFDLVKDIGERSDIIMFNTLIDGY-------CLVGEM------GKAFSVLDAMIS 460

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
                   AG   +     +  LV      G+ ++         L +F++M   KIKP  
Sbjct: 461 --------AGIGPDTF--TYNTLVNGYFKSGRIDDG--------LNLFREMSDKKIKPTT 502

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDE 703
           VT++ IL+   R      A  +L E+      V    + +++    R+N   +A+ +F +
Sbjct: 503 VTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQK 562

Query: 704 VKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           +  M+        N + + ++   ++  A+
Sbjct: 563 LCTMNVKFNITTLNTMINSMYTVQRREEAK 592



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 97/258 (37%), Positives = 150/258 (58%)

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           PD +T+N+++    + G    A NL++EM+ +G   D+ T+N++++A+CK   +D A  +
Sbjct: 114 PDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELL 173

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           + +M    + PN VTY++MI GY+  GR ++A  MF EM   G+  D VS+N+ +    K
Sbjct: 174 LRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCK 233

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
            GR +EA  +   M + G R + VTY  LL GY  +G + ++   F  MK D +  N L 
Sbjct: 234 HGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLV 293

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           ++ LID Y+K G+  EAM I  E +  GL  DV  YS LI ALC+ G +  AV   ++M 
Sbjct: 294 FTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMI 353

Query: 537 KEGIRPNVVTYNSIIDAF 554
             G++PN V Y+S+I  F
Sbjct: 354 GTGVQPNTVVYHSLIQGF 371



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 136/574 (23%), Positives = 254/574 (44%), Gaps = 48/574 (8%)

Query: 125 AEEALHHVTAFARDDVSLGDILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFA 182
           A   L  +    R D ++  +L++     C  D   Y  +L+ L +     +A+      
Sbjct: 46  ANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMM 105

Query: 183 VKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSG 242
            K E   +      + +I    + GK+  A N++   + +G+   V   +++I+A  ++ 
Sbjct: 106 AKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKAR 165

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
               A  +   M    + PN VTY ++I      G  ++   ++F +M   G+ PD +++
Sbjct: 166 AVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLG-RWEEATKMFREMTGRGLIPDIVSW 224

Query: 303 NSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           NS + ++C  G   EAA  +F  M  +G   +I TY  LL                  M 
Sbjct: 225 NSFMDSLCKHGRSKEAAE-IFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMK 283

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
              I  N + ++ +ID YAK G +D+A+ + SEM+  G+  D  +Y+T++S   ++GR  
Sbjct: 284 GDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLA 343

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM-FEQMKADCVSPNLLTYSTL 480
           +A+    +M  +G++ + V Y++L+ G+   G   + + + +E M      PN+  ++++
Sbjct: 344 DAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSI 403

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           +    K G   +A  IF   K  G ++D+++++ LID  C  G +  A S+LD M   GI
Sbjct: 404 VHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGI 463

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
            P+  TYN++++ + +S      +DD             L+      DK ++    T N 
Sbjct: 464 GPDTFTYNTLVNGYFKSG----RIDD------------GLNLFREMSDKKIKPTTVTYNI 507

Query: 601 IIKVF---GQLVA------EKAGQGKK--------------ENRCRQEILCILGVFQKMH 637
           I+      G+ VA      E  G G                 N C  E + +   FQK+ 
Sbjct: 508 ILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVM---FQKLC 564

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            + +K N+ T + ++N+       E+A  L   +
Sbjct: 565 TMNVKFNITTLNTMINSMYTVQRREEAKDLFSAI 598



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 173/349 (49%), Gaps = 6/349 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    + G +D A  I      +G    V+ +S LISA  R G   +A+  FN M  
Sbjct: 295 TILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIG 354

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGV-QPDRITFNSLL-AVCSRGG 313
             ++PN V Y+++I   C  G  D     E+  +M+ NG+ +P+   FNS++ ++C  G 
Sbjct: 355 TGVQPNTVVYHSLIQGFCTHG--DLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGR 412

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           + +A  ++F+ +   G   DI  +NTL+D  C   +M  AF ++  M +  I P+  TY+
Sbjct: 413 VMDA-HHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYN 471

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+++GY K+GR+DD LN+F EM    I    V+YN +L    + GR   A  +  EM   
Sbjct: 472 TLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGC 531

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G      TYN +L G  +    DE   MF+++    V  N+ T +T+I+        +EA
Sbjct: 532 GTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEA 591

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
             +F     +GL  +   Y  +I  L K G VE A ++   M K G  P
Sbjct: 592 KDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAP 640



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 153/349 (43%), Gaps = 73/349 (20%)

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           P   T+  ++  C R    E     F  ++  G+  D    NT+L  +C   + D A ++
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 357 -----------------------------------MAEMPAKN---ISPNVVTYSTMIDG 378
                                              +  M AK     SP+VVTY+T+I G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           + K G++  A N++ EM   G   D V++N++++   K    + A L+ ++M  +G+  +
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKA-----DCVS---------------------- 471
            VTY +++ GY   G+++E  +MF +M       D VS                      
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 472 --------PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
                   PN++TY  L+  Y+  G + + M  F   K  G+ A+ ++++ LIDA  K G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG 572
           +++ A+ +L EM  +G+ P+V TY+++I A  R       VD   + +G
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIG 354



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 154/322 (47%), Gaps = 25/322 (7%)

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL-L 425
           P + TY  +++G  +A R +  L  F  +   G+  D+ + NTVL       R ++A+ +
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDE---VRRMFEQMKADCVSPNLLTYSTLID 482
           + + M   G   DA +Y  +L       +  +   + RM  + +  C SP+++TY+T+I 
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVC-SPDVVTYNTVIH 124

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            + K G   +A  ++ E  Q G   DVV ++++I+ALCK   V++A  LL +M   G+ P
Sbjct: 125 GFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPP 184

Query: 543 NVVTYNSIIDAF---GR-SATTECTVDDVERDLGKQKESAN--LDAMCSQD-DKDVQE-- 593
           N VTY S+I  +   GR    T+   +   R L     S N  +D++C     K+  E  
Sbjct: 185 NKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIF 244

Query: 594 ---AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
              A +     I  +G L+   A +G     C  +   ++  F  M    I  N + F+ 
Sbjct: 245 YSMAAKGHRPNIVTYGILLHGYATEG-----CFAD---MMSFFNTMKGDGIVANCLVFTI 296

Query: 651 ILNACSRCNSFEDASMLLEELR 672
           +++A ++    ++A ++L E++
Sbjct: 297 LIDAYAKRGMMDEAMLILSEMQ 318


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/563 (26%), Positives = 254/563 (45%), Gaps = 69/563 (12%)

Query: 120 RHSVVAEEALHHVTAFARDDVSLGDILKKF---EFKLCGADDYTFLLRELGNRGEWSKAI 176
           RH+  +   L H+  +AR      +ILK+     + L G+D +  L         W+   
Sbjct: 6   RHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEIL---------WTTRN 56

Query: 177 QCF-AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALI 235
            C   F V              A+ S+L  LG ++ A   F             + +A +
Sbjct: 57  VCVPGFGV------------FDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFL 104

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV 295
               ++G    +   F  M    + P + TYN +I    K G D      +F+ M + G+
Sbjct: 105 HRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEG-DMLTARSLFEQMKKMGL 163

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
            PD +T+N+L+    + GL + +  LF EM   G + D+ TYN L+++ CK   M  AFE
Sbjct: 164 TPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFE 223

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
              EM  K++ PNV++YST+ID   K G +  A+  F +M  +G+  +  +Y++++    
Sbjct: 224 FFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANC 283

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K G   EA ++  EM    +  + VTY  LL G  ++G  +E   +F  M    V+PNL 
Sbjct: 284 KAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQ 343

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
            Y+ LI  + K     +AM++F E ++  +K D++L+  ++  LC    +E    ++ EM
Sbjct: 344 AYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEM 403

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKE----SANLDAMCSQDDK 589
            + GI  N V Y +++DA+ ++      ++ +E  RDLG +       A +D +C +   
Sbjct: 404 KESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRG-- 461

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
            VQEA       I  FG                            +M    ++PNV  ++
Sbjct: 462 LVQEA-------IYYFG----------------------------RMPDHDLQPNVAVYT 486

Query: 650 AILNACSRCNSFEDASMLLEELR 672
           A+++   + N   DA  L +E++
Sbjct: 487 ALIDGLCKNNCIGDAKKLFDEMQ 509



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 194/391 (49%), Gaps = 38/391 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I   G++G +D +  +FE     G    V  ++ALI+++ +      A   F  MK 
Sbjct: 171 NTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKD 230

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
            +LKPN+++Y+ +IDA  K G+  +  ++ F DM R G+ P+  T++SL+ A C  G L 
Sbjct: 231 KDLKPNVISYSTLIDALCKEGM-MQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLG 289

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA   L +EM+   +D +I TY TLLD +C+   M+ A E+   M    ++PN+  Y+ +
Sbjct: 290 EAFM-LADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTAL 348

Query: 376 IDGYAKAGRLDDALNMF-----------------------------------SEMKFLGI 400
           I G+ K   +D A+ +F                                   +EMK  GI
Sbjct: 349 IHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGI 408

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
           G + V Y T++  Y K G   EA+ + +EM   G     VT+ AL+ G  K+G   E   
Sbjct: 409 GANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIY 468

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
            F +M    + PN+  Y+ LID   K     +A ++F E +   +  D + Y+A+ID   
Sbjct: 469 YFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNL 528

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           K+G  + A+++ ++M + GI  ++  Y S++
Sbjct: 529 KHGNFQEALNMRNKMMEMGIELDLYAYTSLV 559



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 211/447 (47%), Gaps = 24/447 (5%)

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
           RN   P    F++L +V    G+ EAA   F  M    +     + N  L  + K  + D
Sbjct: 55  RNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGD 114

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
           L+ +   +M    I+P V TY+ MI    K G +  A ++F +MK +G+  D V+YNT++
Sbjct: 115 LSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLI 174

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
             Y K+G  +E++ + +EM+  G   D +TYNAL+  + K          F +MK   + 
Sbjct: 175 DGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLK 234

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           PN+++YSTLID   K G+ + A++ F +  + GL  +   YS+LIDA CK G +  A  L
Sbjct: 235 PNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFML 294

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS------ 585
            DEM +E +  N+VTY +++D            +++ R +GK   + NL A  +      
Sbjct: 295 ADEMLQEHVDLNIVTYTTLLDGLCEEGMMN-EAEELFRAMGKAGVTPNLQAYTALIHGHI 353

Query: 586 ---QDDKDVQEAGRTDNQIIK----VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
                DK ++       + IK    ++G +V     + K E  C+        +  +M +
Sbjct: 354 KVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLE-ECKI-------IMTEMKE 405

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQ 696
             I  N V ++ +++A  +  +  +A  LLEE+R    +V  V    L+    +  +  +
Sbjct: 406 SGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQE 465

Query: 697 ALSLFDEVKLMDSSTASAFYNALTDML 723
           A+  F  +   D     A Y AL D L
Sbjct: 466 AIYYFGRMPDHDLQPNVAVYTALIDGL 492



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 170/351 (48%), Gaps = 36/351 (10%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V ++S LI A  + G  Q AI  F  M R  L PN  TY+++IDA  K G +      + 
Sbjct: 237 VISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAG-NLGEAFMLA 295

Query: 288 DDMLRNGVQPDRITFNSLL-AVCSRGGLWEA----------------------------- 317
           D+ML+  V  + +T+ +LL  +C  G + EA                             
Sbjct: 296 DEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKV 355

Query: 318 -----ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
                A  LFNEM  + I  DI  + T++  +C  ++++    IM EM    I  N V Y
Sbjct: 356 RSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIY 415

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T++D Y KAG   +A+N+  EM+ LG  +  V++  ++    K G  +EA+     M  
Sbjct: 416 TTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPD 475

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             ++ +   Y AL+ G  K     + +++F++M+   + P+ + Y+ +ID   K G ++E
Sbjct: 476 HDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQE 535

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           A+ +  +  + G++ D+  Y++L+  L + G V+ A   L EM  +GI P+
Sbjct: 536 ALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPD 586



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 146/300 (48%), Gaps = 3/300 (1%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++ A+ +F      G    + A++ALI  + +     +A+ +FN M+  ++KP+++ +
Sbjct: 321 GMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLW 380

Query: 267 NAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
             ++   C +  ++   +  I  +M  +G+  + + + +L+    + G    A NL  EM
Sbjct: 381 GTIVWGLCSESKLEECKI--IMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEM 438

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              G +  + T+  L+D +CK   +  A      MP  ++ PNV  Y+ +IDG  K   +
Sbjct: 439 RDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCI 498

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            DA  +F EM+   +  D+++Y  ++    K G F+EAL +  +M   GI  D   Y +L
Sbjct: 499 GDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSL 558

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  + G+  + R+   +M    + P+    + L+  + + G   EA+++  E  + GL
Sbjct: 559 VWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGL 618


>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
 gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
          Length = 1283

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 249/524 (47%), Gaps = 61/524 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQE--AISVFNSM 254
           +AM+ +  R G+ D A+ + +   ++     + +F+ LI+A  +SG      A+ + + +
Sbjct: 65  NAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEV 124

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           ++  L+P+ +TYN +I AC +G  +    V +F++M+ +  +PD  T+N++++V  R G 
Sbjct: 125 RQAGLRPDAITYNTLISACSQGS-NLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGK 183

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            + A  +F E+V +G   D  TYN+LL A  K   ++    +  E+       + +TY+T
Sbjct: 184 AQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNT 243

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           MI  Y K GRLD AL ++ EM+ +G   D V+Y  ++    K+ R  EA  V +EM  +G
Sbjct: 244 MIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAG 303

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++   VT++AL+  Y K G+ D+  R F++M    V P+ L Y  ++DV+++    ++ M
Sbjct: 304 LKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLM 363

Query: 495 QIFREFKQAGLKADVVLYSALIDALCK--------------------NGLVESAV----- 529
            ++R   + G K D  LY  L+ AL K                    N LV S++     
Sbjct: 364 VLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAE 423

Query: 530 ------SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
                 SLL     +G  P+  +  SI+DA+ +    E  +  +E        S NL + 
Sbjct: 424 CISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISE 483

Query: 584 CS-----QDDKDV---QEAGRTDNQIIK--VFGQ-------LVAEKAGQGKKENRCRQEI 626
           CS     ++ K V   QE  R   Q++K   FGQ       L+            C+   
Sbjct: 484 CSIMLLCKNGKIVDAIQEYSR--KQMLKRGSFGQDCDLYEYLITYLEEAELFPEACQ--- 538

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                VF  M  L I P+   + +I+  C R    E A  L+++
Sbjct: 539 -----VFCDMQFLGIVPSQKIYQSIIYTCCRLGFPETAYQLMDD 577



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 167/307 (54%), Gaps = 3/307 (0%)

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           R+   P +  +NA++    + G  F    ++ D M    ++PD ++FN+L+   ++ G  
Sbjct: 54  RFPHLPTVQVFNAMMGVYARSG-RFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCL 112

Query: 316 EA--ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            A  A  L +E+   G+  D  TYNTL+ A  +G+ +D A  +  EM A    P++ TY+
Sbjct: 113 AAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYN 172

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            M+  + + G+  +A  MF E+   G   D V+YN++L  +AK G  E    VC+E+  +
Sbjct: 173 AMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKA 232

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G RKD +TYN ++  YGK G+ D    ++++M+A   +P+ +TY+ L+D   K     EA
Sbjct: 233 GFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEA 292

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            ++  E   AGLK  +V +SALI A  K+G  + A    D M + G++P+ + Y  ++D 
Sbjct: 293 GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDV 352

Query: 554 FGRSATT 560
           F RS  T
Sbjct: 353 FARSDET 359



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 149/636 (23%), Positives = 291/636 (45%), Gaps = 38/636 (5%)

Query: 231  FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN-AVIDACGKGGVDFKHVVEIFDD 289
            + ++I    R G+ + A  + +   R ++  N+++   A+I+A GK  +      E F  
Sbjct: 555  YQSIIYTCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGK--LKLWQQAENFVK 612

Query: 290  MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
             L+     DR  +N+L+   +  GL+E AR +F+ M+ +G    + + N ++ A+    +
Sbjct: 613  GLKQESGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGR 672

Query: 350  MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            +D  + ++ E+   +I  +  T   M++ +AKAG + + + +++ MK  G   +   Y  
Sbjct: 673  LDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRI 732

Query: 410  VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
            ++S+     RF +  L+  EME +G + D V  N LL  Y   G +D    ++  +    
Sbjct: 733  MISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAG 792

Query: 470  VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            + P+  TY+TLI +YS+    +E   +  E  + GL   +  Y  L+ A  K  L E A 
Sbjct: 793  LEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQAD 852

Query: 530  SLLDEMTKEGIRPNVVTYNSIIDAF--GRSATTECTVDDVERDLGKQKESANLDAMCS-- 585
             L +EM  +G R N   Y+ ++  +   R+ +    +    ++ G +   A +  + +  
Sbjct: 853  LLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSY 912

Query: 586  ------QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
                   + + V  + ++ N  I          A       R R   L I  + + M + 
Sbjct: 913  GTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYL-----RNRDYSLGITKLLE-MKRD 966

Query: 640  KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALS 699
             ++P+   +++ + A S C   +DA +LL+ L+   +  + +   LL     +++ +  S
Sbjct: 967  GVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQ---DCGFDLPIRLLTERTSSLFTEVDS 1023

Query: 700  LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVW--------ENVWSE 751
              +++  ++ S +  F NAL D+LW F ++  A  +     +R ++        E  W  
Sbjct: 1024 FLEKLGTLEDSASLNFVNALEDLLWAFERRATASWIFQLAVKRSIYHHNIFRVEEKDWGA 1083

Query: 752  SCLDLHLMSSGAARAMVHAWLLNIHSIVFEGH-ELPKLLSILTGWGKHSKVVGDGALRRA 810
               DL  +S+GAA   +  WL  +     +G  E PK + ++TG G+++ V    +LR+ 
Sbjct: 1084 ---DLRKLSAGAALVALTLWLDQMQDASLQGAPESPKSIVLVTGEGEYNMV----SLRKT 1136

Query: 811  VEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRES 846
            +   L  MG+PF       GRF+     +  WL++S
Sbjct: 1137 IRAYLLEMGSPFLPCRSRSGRFVVKAYSLKMWLKDS 1172



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/382 (22%), Positives = 172/382 (45%), Gaps = 8/382 (2%)

Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIF--ETALNEG-YGNTVYAFSALISAYGRS 241
           R+   N    ++   I +L + GK+  A   +  +  L  G +G     +  LI+    +
Sbjct: 471 RQHVPNSHNLISECSIMLLCKNGKIVDAIQEYSRKQMLKRGSFGQDCDLYEYLITYLEEA 530

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
               EA  VF  M+   + P+   Y ++I  C + G   +   ++ DD  R+ +  + ++
Sbjct: 531 ELFPEACQVFCDMQFLGIVPSQKIYQSIIYTCCRLGFP-ETAYQLMDDAARSDISLNILS 589

Query: 302 FN-SLLAVCSRGGLWEAARNLFNEMVHR-GIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
              +++    +  LW+ A N    +    G+D+ I  +N L+ A  +    + A  I   
Sbjct: 590 CRVAMIEAYGKLKLWQQAENFVKGLKQESGVDRRI--WNALIHAYAESGLYEHARAIFDI 647

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M  K   P V + + M+      GRLD+   +  E++ L I + + +   +L  +AK G 
Sbjct: 648 MIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGD 707

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
             E + +   M+++G   +   Y  ++       ++ +V  M  +M+     P+L+  +T
Sbjct: 708 VFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNT 767

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           L+ +Y+  G +   ++++    +AGL+ D   Y+ LI    +N   E   +LL EM K G
Sbjct: 768 LLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRG 827

Query: 540 IRPNVVTYNSIIDAFGRSATTE 561
           + P + +Y  ++ A G++   E
Sbjct: 828 LTPKLESYKILLAASGKAKLWE 849



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 128/252 (50%), Gaps = 36/252 (14%)

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE--AMQIFR 498
            +NA++G Y + G++D+ R++ + M+   + P+L++++TLI+  +K G      A+++  
Sbjct: 63  VFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLH 122

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E +QAGL+ D + Y+ LI A  +   ++ AV++ +EM     RP++ TYN+++   GR  
Sbjct: 123 EVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCG 182

Query: 559 TTE------------------CTVDDVERDLGKQKESANLDAMCSQDDK-DVQEAGRTDN 599
             +                   T + +     K+ +   ++ +C +  K   ++ G T N
Sbjct: 183 KAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYN 242

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
            +I ++G++       G+ +          LG++ +M  +   P+ VT++ ++++  + +
Sbjct: 243 TMIHMYGKM-------GRLD--------LALGLYDEMRAIGCTPDAVTYTVLVDSLGKMD 287

Query: 660 SFEDASMLLEEL 671
              +A  +LEE+
Sbjct: 288 RISEAGKVLEEM 299



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 96/475 (20%), Positives = 201/475 (42%), Gaps = 35/475 (7%)

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           SIL +   +    ++ + A  +GY     +  +++ AY + G  ++ +S+   ++++   
Sbjct: 417 SILIKAECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPN 476

Query: 261 P-NLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             NL++  +++  C  G  VD          + R     D   +  L+       L+  A
Sbjct: 477 SHNLISECSIMLLCKNGKIVDAIQEYSRKQMLKRGSFGQDCDLYEYLITYLEEAELFPEA 536

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST-MID 377
             +F +M   GI      Y +++   C+    + A+++M +    +IS N+++    MI+
Sbjct: 537 CQVFCDMQFLGIVPSQKIYQSIIYTCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIE 596

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            Y K      A N    +K    G+DR  +N ++  YA+ G +E A  +   M   G   
Sbjct: 597 AYGKLKLWQQAENFVKGLKQES-GVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLP 655

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
              + N ++      G+ DE+  + ++++   +  +  T   +++ ++K G   E M+I+
Sbjct: 656 TVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIY 715

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
              K AG   ++ LY  +I  LC N        ++ EM   G +P++V  N+++  +  +
Sbjct: 716 NGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGT 775

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
              + T++     L      A L+      D+D      T N +I ++ +    + G   
Sbjct: 776 GNFDRTIEVYHSIL-----EAGLEP-----DED------TYNTLIVMYSRNFRPEEG--- 816

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                         +  +M K  + P + ++  +L A  +   +E A +L EE+R
Sbjct: 817 ------------FTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMR 859



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 3/154 (1%)

Query: 157 DDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF 216
           + Y  LL   G    W +A   F     +  R N    +   M+ I         A+++ 
Sbjct: 833 ESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRS--IYHMMMKIYRNARNHSKAEHLL 890

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
                +G   T+     L+++YG SG+  EA  V NS+K  NL+ + + Y+ V+DA  + 
Sbjct: 891 SAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRN 950

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCS 310
             D+   +    +M R+GV+PD   + S +   S
Sbjct: 951 R-DYSLGITKLLEMKRDGVEPDHQVWTSFIRAAS 983


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 202/388 (52%), Gaps = 6/388 (1%)

Query: 205 RLGKVDLAKN--IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           RL  V+L ++   +   L+ GY    + F+ L+  + + G    A  VF+ + +  L+P 
Sbjct: 117 RLRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPT 176

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
           +V++N +I  C K G   +    +   M    V PD  TF++L+  +C  G L E +  L
Sbjct: 177 VVSFNTLISGCCKAGA-VEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSL-L 234

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F+EM  +G+  +  T+  L+D  CKG ++DLA +    M A+ + P++VTY+ +I+G  K
Sbjct: 235 FDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCK 294

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G L +A  + +EM   G+  DR+++ T++    K G  E AL + + M   GI  D V 
Sbjct: 295 VGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVA 354

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           +  L+ G  + G+  +  RM   M +    P+  TY+ ++D + K G      ++ +E +
Sbjct: 355 FTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQ 414

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G    VV Y+AL++ LCK G V++A  LLD M   G+ PN +TYN +++   +  ++ 
Sbjct: 415 SDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSS- 473

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDK 589
             VD    + G  K+ A+  A+ ++  K
Sbjct: 474 VDVDIFNSEKGLVKDYASYTALVNESSK 501



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 148/290 (51%), Gaps = 4/290 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+I+ L + G++D    +F+    +G       F+ LI    + G    A+  F  M  
Sbjct: 216 SALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLA 275

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P+LVTYNA+I+   K G D K    + ++M  +G++PDRITF +L+  C + G  E
Sbjct: 276 QGVRPDLVTYNALINGLCKVG-DLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDME 334

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +A  +   MV  GI+ D   +  L+  +C+  ++  A  ++ +M +    P+  TY+ ++
Sbjct: 335 SALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVV 394

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D + K G +     +  EM+  G     V+YN +++   K G+ + A ++   M + G+ 
Sbjct: 395 DCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVA 454

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            + +TYN LL G+ K G   +V  +F   K   +  +  +Y+ L++  SK
Sbjct: 455 PNDITYNILLEGHSKHGSSVDV-DIFNSEKG--LVKDYASYTALVNESSK 501



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 33/201 (16%)

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           PN   ++ L+  + K G    A  +F E  + GL+  VV ++ LI   CK G VE    L
Sbjct: 140 PNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRL 199

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCSQDDKD 590
              M  E + P+V T++++I+   +               G+  E + L D MC +    
Sbjct: 200 KGVMESERVCPDVFTFSALINGLCKE--------------GRLDEGSLLFDEMCGK---- 241

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
               G   N +   F  L+  +   GK +          L  FQ M    ++P++VT++A
Sbjct: 242 ----GLVPNGV--TFTVLIDGQCKGGKVD--------LALKNFQMMLAQGVRPDLVTYNA 287

Query: 651 ILNACSRCNSFEDASMLLEEL 671
           ++N   +    ++A  L+ E+
Sbjct: 288 LINGLCKVGDLKEARRLVNEM 308


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 178/331 (53%), Gaps = 1/331 (0%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
            + L+S   ++G   EA+ ++  +      PN+VT NA+I    K G + +  +++  DM
Sbjct: 469 LTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAG-NMQETLKLLRDM 527

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           L  G+  DRIT+N+L++ C + G  +    L  EMV +GI  DI+T+N LL  +C   ++
Sbjct: 528 LERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKI 587

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           D A  +  E       PNV TY  MIDGY KA ++++  N+ +E+    + L+ V YN++
Sbjct: 588 DEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSL 647

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +  Y   G    A  +  +M+S G+     TY++L+ G    G  D+ + + ++M+ + +
Sbjct: 648 IRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGL 707

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            PN++ Y+T+I  YSK G   +   + +E     +  +   Y+ +ID  CK G  + A  
Sbjct: 708 LPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAK 767

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           LL+EMT++GI P+ VTYN+  +   +    E
Sbjct: 768 LLNEMTEKGILPDAVTYNAFTNGLCKEGKVE 798



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 209/406 (51%), Gaps = 18/406 (4%)

Query: 168 NRGEWSKAIQ--CFAF-----------AVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           N+G +S  I   C  F            + R  R ND   L + ++S L + GK   A  
Sbjct: 430 NQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDG--LLTTLVSGLCKAGKQGEAVE 487

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           ++   L +G+   +   +ALI    ++G  QE + +   M    L  + +TYN +I  C 
Sbjct: 488 LWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCC 547

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQD 333
           K G   K   E+ ++M++ G+QPD  TFN LL  +C+   + EA+R L++E    G   +
Sbjct: 548 KEG-KVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASR-LWHECKKNGYVPN 605

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++TY  ++D  CK  +++    ++ E+ +K +  N V Y+++I  Y   G ++ A  +  
Sbjct: 606 VYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRD 665

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           +MK  G+ L   +Y++++     +G  ++A  +  EM   G+  + V Y  ++GGY K G
Sbjct: 666 DMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLG 725

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           + ++V  + ++M +  + PN  TY+ +ID + K G  KEA ++  E  + G+  D V Y+
Sbjct: 726 QMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYN 785

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
           A  + LCK G VE A  + DEM+   +  + +TY ++ID   + +T
Sbjct: 786 AFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGCHQPST 831



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 224/516 (43%), Gaps = 48/516 (9%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L + G++D A    E  + E    ++  +S  I+   +     EA  V   M    
Sbjct: 297 IIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELG 356

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             PN V YN +ID   K G +    ++I DDML  G+ P+ +T NSL+    +      A
Sbjct: 357 FVPNEVVYNTLIDGYCKMG-NISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQA 415

Query: 319 RNLFNEMVHRG--IDQDIFT---------------------------------YNTLLDA 343
            N+  EM+ RG  I+Q  F+                                   TL+  
Sbjct: 416 ENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSG 475

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +CK  +   A E+   +  K   PN+VT + +I G  KAG + + L +  +M   G+  D
Sbjct: 476 LCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFD 535

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
           R++YNT++S   K G+ +E   + +EM   GI+ D  T+N LL G     K DE  R++ 
Sbjct: 536 RITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWH 595

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           + K +   PN+ TY  +ID Y K    +E   +  E     L+ + V+Y++LI A C NG
Sbjct: 596 ECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCING 655

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DA 582
            + +A  L D+M   G+  +  TY+S++            VDD +  L + ++   L + 
Sbjct: 656 NMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGL----VDDAKHLLDEMRKEGLLPNV 711

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQK 635
           +C              N++  V  ++ +      K       +  C LG       +  +
Sbjct: 712 VCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNE 771

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           M +  I P+ VT++A  N   +    E+A  + +E+
Sbjct: 772 MTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEM 807



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 247/519 (47%), Gaps = 29/519 (5%)

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL 306
           A  VF+ + +  L P+L T   ++ +  K   + K   E++D +   G+ PD   F++++
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKAN-ELKKSYEVYDFICLGGIIPDVHLFSTMI 263

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
               +G   + A  LF++M   G+  ++ TYN ++  +CK  ++D A+    +M  + +S
Sbjct: 264 NAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVS 323

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P+++TYS  I+G  K  ++D+A  +  EM  LG   + V YNT++  Y K+G   EAL +
Sbjct: 324 PSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKI 383

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
             +M S GI  ++VT N+L+ G+ K  +  +   + E+M    +  N  ++S +I+    
Sbjct: 384 RDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCL 443

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
              +  A+   RE     L+ +  L + L+  LCK G    AV L   +  +G  PN+VT
Sbjct: 444 KFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVT 503

Query: 547 YNSIIDAFGRSATTECTV----DDVERDLGKQKESAN-LDAMCSQDDKDVQEAGRTDNQI 601
            N++I    ++   + T+    D +ER L   + + N L + C ++ K V+E      ++
Sbjct: 504 SNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGK-VKEGFELKEEM 562

Query: 602 IK--------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
           +K         F  L+       K +   R        ++ +  K    PNV T+  +++
Sbjct: 563 VKKGIQPDIYTFNLLLHGLCNADKIDEASR--------LWHECKKNGYVPNVYTYGVMID 614

Query: 654 ACSRCNSFEDASMLLEEL---RLFDNQVYGVAHGLLMGYRDNIWVQ-ALSLFDEVKLMDS 709
              + N  E+   LL EL   +L  N V  V + L+  Y  N  +  A  L D++K    
Sbjct: 615 GYCKANKVEEGENLLNELVSKKLELNSV--VYNSLIRAYCINGNMNAAFRLRDDMKSRGV 672

Query: 710 STASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENV 748
             + A Y++L   L + G    A+ ++ E ++  +  NV
Sbjct: 673 LLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNV 711



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 189/377 (50%), Gaps = 10/377 (2%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           K  + ++S L +  ++  +  +++     G    V+ FS +I+A+ +     +AI +F+ 
Sbjct: 222 KTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSK 281

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M++  + PN+VTYN +I   C  G +D  +  +  + M++  V P  IT++  +    + 
Sbjct: 282 MEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFK--EKMVKEKVSPSLITYSVFINGLIKL 339

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              + A  +  EM   G   +   YNTL+D  CK   +  A +I  +M +K ISPN VT 
Sbjct: 340 EKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTL 399

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +++I G+ K+ ++  A N+  EM   G+ +++ S++ V++      RF  AL   +EM  
Sbjct: 400 NSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLL 459

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             +R +      L+ G  K GK  E   ++ ++      PN++T + LI    K G  +E
Sbjct: 460 RNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQE 519

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            +++ R+  + GL  D + Y+ LI   CK G V+    L +EM K+GI+P++ T+N ++ 
Sbjct: 520 TLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLH 579

Query: 553 AFGRSATTECTVDDVER 569
                    C  D ++ 
Sbjct: 580 GL-------CNADKIDE 589


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 198/367 (53%), Gaps = 2/367 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +I+   + G++D A +  + A++EG+    + ++ L++   + G+ + A+ V ++M 
Sbjct: 276 VNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAML 335

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              L P++ TYN++I    K G + +  V+I D M+     P+ +T+N++++   +    
Sbjct: 336 LGGLDPDIYTYNSLISGLCKLG-EIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRV 394

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  +   +  +GI  D+ T+N+L+  +C  +    A ++  EM  K   P+  TY+ +
Sbjct: 395 DEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNML 454

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID    + +L++ALN+  EM+  G   + V YNT++  + K  R EEA  +  EME  G+
Sbjct: 455 IDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGV 514

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
            +D+VTYN L+ G  K  + ++  ++ +QM  + + P+  TY++L+  + K G  K+A  
Sbjct: 515 SRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAAD 574

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-F 554
           I +    +G   D+V Y+ LI  LCK G V+ A  LL  +  +G+      YN +I A F
Sbjct: 575 IVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALF 634

Query: 555 GRSATTE 561
            R+ T E
Sbjct: 635 KRNRTHE 641



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 187/355 (52%), Gaps = 1/355 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +D A  I E  +  G   T    + LI+ + + G   +A+S          +P+  TY
Sbjct: 252 GNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTY 311

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N +++   K G   KH +E+ D ML  G+ PD  T+NSL++   + G  E A  + ++MV
Sbjct: 312 NTLVNGLCKIG-HAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMV 370

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            R    +  TYN ++ ++CK  ++D A EI   + +K I P+V T++++I G   +    
Sbjct: 371 SRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHK 430

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            A+++F EMK  G   D  +YN ++       + EEAL + KEME +G  ++ V YN L+
Sbjct: 431 SAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLI 490

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G+ K  + +E   +F++M+   VS + +TY+TLID   K    ++A Q+  +    GL+
Sbjct: 491 DGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLR 550

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            D   Y++L+   CK G ++ A  ++  MT  G  P++VTY ++I    ++   +
Sbjct: 551 PDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQ 605



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 202/400 (50%), Gaps = 7/400 (1%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDL 211
           C   D T   L+     +G   +A+     AV  E  + DQ    + +++ L ++G    
Sbjct: 269 CPCTDVTVNVLINGFCKQGRIDQALSFIQEAVS-EGFRPDQFTY-NTLVNGLCKIGHAKH 326

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + +  L  G    +Y +++LIS   + G  +EA+ + + M   +  PN VTYNA+I 
Sbjct: 327 AMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIIS 386

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           + C +  VD     EI   +   G+ PD  TFNSL+         ++A +LF EM  +G 
Sbjct: 387 SLCKENRVD--EATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGC 444

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             D FTYN L+D++C   +++ A  ++ EM     + NVV Y+T+IDG+ K  R+++A  
Sbjct: 445 RPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEE 504

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +F EM+  G+  D V+YNT++    K  R E+A  +  +M   G+R D  TYN+LL  + 
Sbjct: 505 IFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFC 564

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K G   +   + + M +   +P+++TY+TLI    K G  + A ++ R  +  G+     
Sbjct: 565 KTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPH 624

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            Y+ +I AL K      A+ L  EM  +   P+ +TY  +
Sbjct: 625 AYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIV 664



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 193/371 (52%), Gaps = 3/371 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L +  +V  A  + E   + G       F+ ++  Y   G    A+ +   M  Y 
Sbjct: 209 LIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
                VT N +I+  C +G +D    +    + +  G +PD+ T+N+L+    + G  + 
Sbjct: 269 CPCTDVTVNVLINGFCKQGRID--QALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKH 326

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  + + M+  G+D DI+TYN+L+  +CK  +++ A +I+ +M +++ SPN VTY+ +I 
Sbjct: 327 AMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIIS 386

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
              K  R+D+A  +   +   GI  D  ++N+++         + A+ + +EM+  G R 
Sbjct: 387 SLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRP 446

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  TYN L+       K +E   + ++M+ +  + N++ Y+TLID + K    +EA +IF
Sbjct: 447 DEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIF 506

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E +  G+  D V Y+ LID LCK+  VE A  L+D+M  EG+RP+  TYNS++  F ++
Sbjct: 507 DEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKT 566

Query: 558 ATTECTVDDVE 568
              +   D V+
Sbjct: 567 GDIKKAADIVQ 577



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 240/534 (44%), Gaps = 41/534 (7%)

Query: 145 ILKKFEFKLCGADDYTFLL-RELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISIL 203
           +L++ +   C  D   FL+  E   + E    +      ++ E R     +  + ++++L
Sbjct: 119 VLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVL 178

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
               K+ L ++   + +     + V  F+ LI A  ++   + AI +   M  Y L P+ 
Sbjct: 179 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDE 238

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            T+  ++    +GG +    + I + M+  G     +T N L+    + G  + A +   
Sbjct: 239 TTFTTIMQGYIEGG-NLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQ 297

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           E V  G   D FTYNTL++ +CK      A E++  M    + P++ TY+++I G  K G
Sbjct: 298 EAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLG 357

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            +++A+ +  +M       + V+YN ++S   K  R +EA  + + + S GI  D  T+N
Sbjct: 358 EIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFN 417

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           +L+ G      +     +FE+MK     P+  TY+ LID        +EA+ + +E +  
Sbjct: 418 SLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELN 477

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           G   +VV+Y+ LID  CKN  +E A  + DEM  +G+  + VTYN++ID   +S   E  
Sbjct: 478 GCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVE-- 535

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD----NQIIKVFGQLVAEKAGQGKKE 619
                       ++A L       D+ + E  R D    N ++  F      K G  KK 
Sbjct: 536 ------------DAAQL------MDQMIMEGLRPDKFTYNSLLTHFC-----KTGDIKKA 572

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
                       + Q M      P++VT++ +++   +    + AS LL  +++
Sbjct: 573 A----------DIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQM 616



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 219/458 (47%), Gaps = 28/458 (6%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV--DFKHVVEIF 287
            +  ++   G++G  +    V   MK    + +   +   +++ GK  +  +   +V++ 
Sbjct: 99  VYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVM 158

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           +D  R  ++PD   +N LL V       +   +  + MV R I  D+ T+N L+ A+CK 
Sbjct: 159 EDEYR--IKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKA 216

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            Q+  A  +M EMP+  +SP+  T++T++ GY + G LD AL +  +M   G     V+ 
Sbjct: 217 HQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTV 276

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N +++ + K GR ++AL   +E  S G R D  TYN L+ G  K G       + + M  
Sbjct: 277 NVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLL 336

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + P++ TY++LI    K G  +EA++I  +        + V Y+A+I +LCK   V+ 
Sbjct: 337 GGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDE 396

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN------LD 581
           A  +   +T +GI P+V T+NS+I     S+  +  +D  E   GK            +D
Sbjct: 397 ATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLID 456

Query: 582 AMCSQDD--------KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
           ++CS           K+++  G   N +I  +  L+      G  +N+  +E      +F
Sbjct: 457 SLCSSRKLEEALNLLKEMELNGCARNVVI--YNTLI-----DGFCKNKRIEE---AEEIF 506

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            +M    +  + VT++ +++   +    EDA+ L++++
Sbjct: 507 DEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQM 544



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 228/503 (45%), Gaps = 40/503 (7%)

Query: 247 AISVFN-SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A+ VFN + K+ N  P+   Y  ++   GK G  F+++  + ++M  +G + DR  F   
Sbjct: 80  ALRVFNWASKQPNFVPSSSVYEEILRKLGKAG-SFEYMRRVLEEMKLSGCEFDRGIFLIF 138

Query: 306 LAVCSRGGLWEAARNLFNEMVHR-GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           +    +  L++    +   M     I  D   YN LL+ +    ++ L     + M  + 
Sbjct: 139 VESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRR 198

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           I  +V T++ +I    KA ++  A+ M  EM   G+  D  ++ T++  Y + G  + AL
Sbjct: 199 IRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGAL 258

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            + ++M   G     VT N L+ G+ KQG+ D+     ++  ++   P+  TY+TL++  
Sbjct: 259 RIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGL 318

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            K G  K AM++       GL  D+  Y++LI  LCK G +E AV +LD+M      PN 
Sbjct: 319 CKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNA 378

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
           VTYN+II +  +    E  VD+             L  +C            T N +I+ 
Sbjct: 379 VTYNAIISSLCK----ENRVDEATEIARLLTSKGILPDVC------------TFNSLIQG 422

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
                  K+                + +F++M     +P+  T++ ++++       E+A
Sbjct: 423 LCLSSNHKSA---------------MDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEA 467

Query: 665 SMLLEELRLFDNQVYGVAHGLLM-GYRDNIWVQ-ALSLFDEVKLMDSSTASAFYNALTDM 722
             LL+E+ L       V +  L+ G+  N  ++ A  +FDE++L   S  S  YN L D 
Sbjct: 468 LNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDG 527

Query: 723 LWHFGQ-KRGAQL---VVLEGKR 741
           L    + +  AQL   +++EG R
Sbjct: 528 LCKSKRVEDAAQLMDQMIMEGLR 550


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 236/524 (45%), Gaps = 59/524 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +AMI  L R G++D A  +       G   TV  ++ L+ A  +SG  +EA  +   M  
Sbjct: 215 TAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVE 274

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P++VT+  +I    +G   F  V  +  +M   G+ P+ + +N ++    R G   
Sbjct: 275 GRVRPSIVTFGILISGLARGQ-QFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCS 333

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM-------------------------- 350
            A  LF+EMV +GI Q + TYN +  A+CK  +M                          
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVV 393

Query: 351 ----------DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
                     DL   ++ EM A+ + PN    +  I    K+G+ ++A  ++ ++   G+
Sbjct: 394 AWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGL 453

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
           G++  + N ++    +    +EA  V K M +SG+  D +TYN ++ G  K  K DE  +
Sbjct: 454 GVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQ 513

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + + M      P+L T++  +  Y   G  +E + +  + K  GLK D+V Y  +ID  C
Sbjct: 514 LRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYC 573

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESA 578
           K   +  A   L E+ K G+RPN V YN++I  +GR+      +   D  +  G Q    
Sbjct: 574 KAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPV 633

Query: 579 NLDA----MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG--- 631
             ++    MC         AG  + ++  VF Q + +    G        +  C +G   
Sbjct: 634 TYNSLMYWMC--------HAGLVE-EVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKID 684

Query: 632 ----VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                F++MH   I PN +T++ ++ A S+  + E+AS L +E+
Sbjct: 685 EAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEM 728



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 181/367 (49%), Gaps = 3/367 (0%)

Query: 188 RKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEA 247
           + ND   L +A I  L + GK + A  I+   L +G G  V   +ALI    +    +EA
Sbjct: 419 KPND--ALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEA 476

Query: 248 ISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA 307
             V  +M    ++ + +TYN +I  C K        +++ DDM++ G +PD  TFN  L 
Sbjct: 477 TKVLKAMVNSGVELDRITYNIMIQGCCKAS-KMDEAIQLRDDMIKRGFKPDLFTFNIFLH 535

Query: 308 VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
                G  E   +L ++M   G+  DI TY T++D  CK   M  A E + E+    + P
Sbjct: 536 TYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRP 595

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           N V Y+ +I GY + G + DA+ +   MK+ GI    V+YN+++      G  EE   V 
Sbjct: 596 NAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVF 655

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
            +     I    + Y  ++ G+ K GK DE    F++M +  + PN +TY+TL+  YSK 
Sbjct: 656 AQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKS 715

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G  +EA ++F E    G+  D V Y+ LI   C+   ++  V    EM+ + ++ +  +Y
Sbjct: 716 GNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSY 775

Query: 548 NSIIDAF 554
           N+ +D  
Sbjct: 776 NAFVDGI 782



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 183/363 (50%), Gaps = 8/363 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++DL   +    L           +A I    +SG  +EA  ++  +    L  N+ T 
Sbjct: 401 GRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATS 460

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           NA+I    +G  + K   ++   M+ +GV+ DRIT+N ++  C +    + A  L ++M+
Sbjct: 461 NALIHGLCQGN-NMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMI 519

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            RG   D+FT+N  L   C   +++    ++ +M ++ + P++VTY T+IDGY KA  + 
Sbjct: 520 KRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMH 579

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            A    +E+   G+  + V YN ++  Y + G   +A+ +   M+ +GI+   VTYN+L+
Sbjct: 580 KANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLM 639

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
                 G  +EV+ +F Q     +   ++ Y+ +I  + K G   EA+  F+E    G+ 
Sbjct: 640 YWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIP 699

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            + + Y+ L+ A  K+G  E A  L DEM   GI P+ V+YN++I  F       C VD 
Sbjct: 700 PNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGF-------CEVDS 752

Query: 567 VER 569
           +++
Sbjct: 753 LDK 755



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 207/464 (44%), Gaps = 84/464 (18%)

Query: 222 EGYGNTV--YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
           +G+G T     ++ +I  + R G+C EA+ +F+ M    +K  +VTYN +  A  K G +
Sbjct: 308 QGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEG-E 366

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLA-------------------------------- 307
            +H  +I D+ML  G+      FNS++A                                
Sbjct: 367 MEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMT 426

Query: 308 -----VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
                +C  G   EAA   F +++ +G+  ++ T N L+  +C+G  M  A +++  M  
Sbjct: 427 ACIQELCKSGKHEEAAEIWF-QVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVN 485

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
             +  + +TY+ MI G  KA ++D+A+ +  +M   G   D  ++N  L  Y  LG+ EE
Sbjct: 486 SGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEE 545

Query: 423 ALLVCKEMESSGIRKDAVT-----------------------------------YNALLG 447
            L +  +M+S G++ D VT                                   YNAL+G
Sbjct: 546 ILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIG 605

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           GYG+ G   +   + + MK + + P  +TY++L+      GL +E   +F +     ++ 
Sbjct: 606 GYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIEL 665

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE--CTVD 565
            V+ Y+ +I   CK G ++ AV    EM   GI PN +TY +++ A+ +S   E    + 
Sbjct: 666 GVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLF 725

Query: 566 DVERDLGKQKESANLDAM----CSQD--DKDVQEAGRTDNQIIK 603
           D    LG   +S + + +    C  D  DK V+      +Q++K
Sbjct: 726 DEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLK 769



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 126/506 (24%), Positives = 229/506 (45%), Gaps = 33/506 (6%)

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG--VQPDR 299
           G    A   F  +      P++ T + +++A G GG       ++F +M R+G  V PD 
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGG-QLDVARKVFGEM-RDGKTVAPDV 211

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
            T+ +++    R G  +AA  +  E+   GI   + TYN L+DA+CK  +++ AF +   
Sbjct: 212 HTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGR 271

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M    + P++VT+  +I G A+  +  +   +  EM+  GI  + V YN ++  + + G 
Sbjct: 272 MVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGH 331

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
             EAL +  EM S GI++  VTYN +     K+G+ +   ++ ++M    +  +   +++
Sbjct: 332 CSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNS 391

Query: 480 LIDVYSKG-GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           ++  + +G G     +++ RE     LK +  L +A I  LCK+G  E A  +  ++  +
Sbjct: 392 VVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGK 451

Query: 539 GIRPNVVTYNSIIDAF--GRSATTECTVDDVERDLGKQKESANLDAM---CSQDDKDVQE 593
           G+  NV T N++I     G +      V     + G + +    + M   C +  K + E
Sbjct: 452 GLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASK-MDE 510

Query: 594 AGRTDNQIIK--------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
           A +  + +IK         F   +      GK E         IL +  +M    +KP++
Sbjct: 511 AIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEE--------ILHLLDQMKSEGLKPDI 562

Query: 646 VTFSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGY-RDNIWVQALSLF 701
           VT+  I++   +      A+  L EL    L  N V  + + L+ GY R+     A+ + 
Sbjct: 563 VTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAV--IYNALIGGYGRNGNISDAIGIL 620

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFG 727
           D +K          YN+L   + H G
Sbjct: 621 DTMKYNGIQPTPVTYNSLMYWMCHAG 646



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 152/296 (51%), Gaps = 1/296 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI    +  K+D A  + +  +  G+   ++ F+  +  Y   G  +E + + + MK   
Sbjct: 498 MIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEG 557

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           LKP++VTY  +ID   K   D     E   ++++NG++P+ + +N+L+    R G    A
Sbjct: 558 LKPDIVTYGTIIDGYCKAK-DMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDA 616

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             + + M + GI     TYN+L+  +C    ++    + A+   K+I   V+ Y+ +I G
Sbjct: 617 IGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQG 676

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           + K G++D+A+  F EM   GI  ++++Y T++  Y+K G  EEA  +  EM S GI  D
Sbjct: 677 FCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPD 736

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +V+YN L+ G+ +    D++     +M +  +  +  +Y+  +D  +     KEA+
Sbjct: 737 SVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITTPWCQKEAV 792



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 160/336 (47%), Gaps = 3/336 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           ++A+I  L +   +  A  + +  +N G       ++ +I    ++    EAI + + M 
Sbjct: 460 SNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMI 519

Query: 256 RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           +   KP+L T+N  +   C  G V+   ++ + D M   G++PD +T+ +++    +   
Sbjct: 520 KRGFKPDLFTFNIFLHTYCNLGKVE--EILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 577

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A     E++  G+  +   YN L+    +   +  A  I+  M    I P  VTY++
Sbjct: 578 MHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNS 637

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++     AG +++   +F++     I L  + Y  ++  + K+G+ +EA++  KEM S G
Sbjct: 638 LMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRG 697

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I  + +TY  L+  Y K G  +E  ++F++M +  + P+ ++Y+TLI  + +     + +
Sbjct: 698 IPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMV 757

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           +   E     LK D   Y+A +D +      + AVS
Sbjct: 758 ESPAEMSSQVLKQDGCSYNAFVDGITTPWCQKEAVS 793



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 69/280 (24%)

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA-DVVLYSALIDALC 520
           F ++ A   SP++ T S L++    GG    A ++F E +     A DV  Y+A+I ALC
Sbjct: 163 FLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALC 222

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           + G +++A ++L E+ + GI+P VVTYN +                             +
Sbjct: 223 RAGEIDAAFAMLAELRRSGIQPTVVTYNVL-----------------------------M 253

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
           DA+C        ++GR + +  ++ G++V         E R                   
Sbjct: 254 DALC--------KSGRVE-EAFRLKGRMV---------EGR------------------- 276

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQAL 698
           ++P++VTF  +++  +R   F +   +L+E++ F      V +  ++G+  R     +AL
Sbjct: 277 VRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEAL 336

Query: 699 SLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
            LFDE+           YN +   L   G+   A+ ++ E
Sbjct: 337 KLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDE 376


>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 876

 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 244/522 (46%), Gaps = 38/522 (7%)

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G + D  TY T++  + +  Q     +++ +M      PNVVTY+ +I  Y +A  L+DA
Sbjct: 375 GFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDA 434

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           +++F+EM+ +G   DRV+Y T++ I+AK G  + AL + + M+++G+  D  TY+ ++  
Sbjct: 435 VDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINC 494

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            GK G      ++F +M      PNL+TY+ +I + +K   Y+ A++++R+ + AG + D
Sbjct: 495 LGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPD 554

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            V YS +++ L   G ++ A ++  EM ++   P+   Y  ++D +G++   E      +
Sbjct: 555 KVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQ 614

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
             L                +  ++    T N ++  F ++                ++  
Sbjct: 615 TML----------------NTGLRPNVPTCNSLLSAFLRV---------------HKLAD 643

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
              + Q M +L + P++ T++ +L+ C+   S  D  +  E + +  +  +     L   
Sbjct: 644 AYNLLQSMLELGLNPSLQTYTLLLSCCTEARSPYDMGIYCELMAVTGHPAHMFLLSLPSA 703

Query: 689 YRD--NIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWE 746
             D  N+   A    D +   D  +     +A+ D L   G K  A  V     +R V+ 
Sbjct: 704 GPDGQNVRDHASKFLDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQRNVYP 763

Query: 747 NVWSE--SC---LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKV 801
           +   E  SC   ++LH+MS G A   +   L      +      P  + I+TGWG+ S+V
Sbjct: 764 DAVKEKGSCYWLINLHVMSDGTAVTALSRTLAWFRQQMLVSGISPSRIDIVTGWGRRSRV 823

Query: 802 VGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWL 843
            G   +R+AV+ LL     PF+  N N G F+  G  +  WL
Sbjct: 824 TGSSMVRQAVQELLHIFSFPFFTENGNSGCFVGCGEPLNRWL 865



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 211/481 (43%), Gaps = 62/481 (12%)

Query: 103 RFVSKMHF--GRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYT 160
           RF S  H       I    R    AEEAL ++  ++ D      +LK+ +       D+T
Sbjct: 310 RFASNGHIVENVAHILRQIRWGPAAEEALANLN-YSMDPYQANQVLKQLQ-------DHT 361

Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETAL 220
             L               F + +KR+   N  G   + M+ ILGR  +      + +  +
Sbjct: 362 VALN--------------FFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMV 407

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG-VD 279
            +G    V  ++ LI +YGR+ Y  +A+ VFN M+R   +P+ VTY  +ID   K G +D
Sbjct: 408 KDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLD 467

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
           F   +E++  M   G+ PD  T++ ++    + G   AA  LF EMV +G   ++ TYN 
Sbjct: 468 F--ALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNI 525

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++    K      A ++  +M +    P+ VTYS +++     G LD+A  +FSEMK   
Sbjct: 526 MIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKN 585

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
              D   Y  ++ ++ K G  E+A    + M ++G+R +  T N+LL  + +  K  +  
Sbjct: 586 WVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAY 645

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKG------GLYKEAMQI--------FREFKQAGL 505
            + + M    ++P+L TY+ L+   ++       G+Y E M +              AG 
Sbjct: 646 NLLQSMLELGLNPSLQTYTLLLSCCTEARSPYDMGIYCELMAVTGHPAHMFLLSLPSAGP 705

Query: 506 KADVV---------------------LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
               V                     L  A++D L K+GL E A S+ +   +  + P+ 
Sbjct: 706 DGQNVRDHASKFLDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQRNVYPDA 765

Query: 545 V 545
           V
Sbjct: 766 V 766



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 153/287 (53%), Gaps = 1/287 (0%)

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TY  ++   G+    F  + ++ D M+++G QP+ +T+N L+    R      A ++FNE
Sbjct: 382 TYTTMVGILGRAK-QFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNE 440

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G + D  TY TL+D   K   +D A E+   M A  +SP+  TYS +I+   KAG 
Sbjct: 441 MQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGH 500

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           L  A  +F EM   G   + V+YN ++++ AK   ++ AL + ++M+S+G + D VTY+ 
Sbjct: 501 LAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSI 560

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++   G  G  DE   +F +MK     P+   Y  L+D++ K G  ++A Q ++     G
Sbjct: 561 VMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTG 620

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           L+ +V   ++L+ A  +   +  A +LL  M + G+ P++ TY  ++
Sbjct: 621 LRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYTLLL 667



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 130/263 (49%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G   D  T+ +++ +  R   + A   L ++MV  G   ++ TYN L+ +  +   ++ A
Sbjct: 375 GFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDA 434

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
            ++  EM      P+ VTY T+ID +AKAG LD AL M+  M+  G+  D  +Y+ +++ 
Sbjct: 435 VDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINC 494

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
             K G    A  +  EM   G   + VTYN ++    K   Y    +++  M++    P+
Sbjct: 495 LGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPD 554

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +TYS +++V    G   EA  +F E K+     D  +Y  L+D   K G VE A     
Sbjct: 555 KVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQ 614

Query: 534 EMTKEGIRPNVVTYNSIIDAFGR 556
            M   G+RPNV T NS++ AF R
Sbjct: 615 TMLNTGLRPNVPTCNSLLSAFLR 637



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 110/279 (39%), Gaps = 46/279 (16%)

Query: 475 LTYSTLIDVYSKGGLYKE------AMQIFREFK-QAGLKADVVLYSALIDALCKNGLVES 527
           L YS  +D Y    + K+      A+  F   K Q G   D   Y+ ++  L +     +
Sbjct: 341 LNYS--MDPYQANQVLKQLQDHTVALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGA 398

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
              LLD+M K+G +PNVVTYN +I ++GR+      VD                      
Sbjct: 399 INKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVF-------------------- 438

Query: 588 DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
             ++Q  G   +++       +  KAG           +   L ++Q+M    + P+  T
Sbjct: 439 -NEMQRVGCEPDRVTYCTLIDIHAKAG----------FLDFALEMYQRMQAAGLSPDTFT 487

Query: 648 FSAILNACSRCNSFEDASMLLEEL---RLFDNQV-YGVAHGLLMGYRDNIWVQALSLFDE 703
           +S I+N   +      A  L  E+       N V Y +   L    R+  +  AL L+ +
Sbjct: 488 YSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARN--YQSALKLYRD 545

Query: 704 VKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
           ++          Y+ + ++L H G    A+ V  E KR+
Sbjct: 546 MQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRK 584


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 171/657 (26%), Positives = 299/657 (45%), Gaps = 98/657 (14%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L +   V+ A+N+++  LN G   ++  F+ LI+   + G  +EA  + + + +Y+L P+
Sbjct: 173 LAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPD 232

Query: 263 LVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARN 320
           + TY ++I   C    +D      +FD M++ G  P+ +T+++L+  +C+ G + EA  +
Sbjct: 233 VFTYTSLILGHCRNRNLDL--AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL-D 289

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           +  EM+ +GI+  ++TY   + A+C     + A E++A M  +   PNV TY+ +I G +
Sbjct: 290 MLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLS 349

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG------ 434
           + G+L+ A+ ++ +M   G+  + V+YN +++     GRF  AL +   ME  G      
Sbjct: 350 RLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 409

Query: 435 --------------IRK---------------DAVTYNALLGGYGKQGKYDEVRRMFEQM 465
                         I K                 VTYN L+ GY  +G  +   R+ + M
Sbjct: 410 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 469

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           K +   P+  TY+ L+  +SK G  + A   F+E  + GL  + V Y+ALID   K+G V
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL----- 580
           + A+SLL  M + G  PNV +YN++I+   +    E    + E+   K  E   L     
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVINGLSK----ENRFSEAEKICDKMVEQGLLPNVIT 585

Query: 581 -----DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV--- 632
                D +C          GRT     K+F  +   K              LC  G    
Sbjct: 586 YTTLIDGLCRN--------GRTQFA-FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMG 688
            ++M ++  +P + T+S +++   R   F +A  L+++++      D ++Y   + LL+ 
Sbjct: 637 AERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIY---YSLLIA 693

Query: 689 YRDNIWV-QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVW-- 745
           +  N+ V  AL +F  ++        + Y AL   L   GQ   AQ  + +    + W  
Sbjct: 694 HCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQ-ALFDNMLEKEWNA 752

Query: 746 -ENVWS--------ESCLD-----LHLMSSGAARAMVHAWLLNIHSIVFEGHELPKL 788
            E VW+        E  LD     LH+M S         +  NI + V  G EL ++
Sbjct: 753 DEIVWTVLVDGLLKEGELDLCMKLLHIMES-------KNFTPNIQTYVILGRELSRI 802



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 199/373 (53%), Gaps = 5/373 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+ L   G+VD A ++ E  + +G   TVY ++  I+A     + +EAI +   MK+
Sbjct: 272 STLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKK 331

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +PN+ TY A+I    + G   +  + ++  ML+ G+ P+ +T+N+L+     GG + 
Sbjct: 332 RGCRPNVQTYTALISGLSRLG-KLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFS 390

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +F+ M   G   +  TYN ++  +C G  ++ A  +  +M      P VVTY+T+I
Sbjct: 391 TALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 450

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY   G +++A  +   MK  G   D  +YN ++S ++K G+ E A    +EM   G+ 
Sbjct: 451 NGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLN 510

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + V+Y AL+ G+ K GK D    + ++M+    +PN+ +Y+ +I+  SK   + EA +I
Sbjct: 511 PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 570

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             +  + GL  +V+ Y+ LID LC+NG  + A  +  +M K    PN+ TY+S+I    +
Sbjct: 571 CDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 630

Query: 557 SATTECTVDDVER 569
               E   D+ ER
Sbjct: 631 ----EGKADEAER 639



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 244/536 (45%), Gaps = 75/536 (13%)

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           +I AC +   + + V +  +++   G      + N+LL   ++  + E ARNL+ +M++ 
Sbjct: 134 MIKAC-RNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192

Query: 329 GIDQDIFTYNTLLDAI-----------------------------------CKGAQMDLA 353
           GI   + T+NTL++ +                                   C+   +DLA
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
           F +   M  +   PN VTYST+I+G    GR+D+AL+M  EM   GI     +Y   ++ 
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
              +   EEA+ +   M+  G R +  TY AL+ G  + GK +    ++ +M  + + PN
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +TY+ LI+    GG +  A++IF   +  G  A+   Y+ +I  LC  G +E A+ L +
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
           +M K G  P VVTYN++I+ +     T+  V++  R L   KE+      C  D+     
Sbjct: 433 KMLKMGPLPTVVTYNTLINGY----LTKGNVNNAARLLDLMKENG-----CEPDE----- 478

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
                      + +LV+  +  GK E+            FQ+M +  + PN V+++A+++
Sbjct: 479 ---------WTYNELVSGFSKWGKLESASF--------YFQEMVECGLNPNPVSYTALID 521

Query: 654 ACSRCNSFEDASMLL---EELRLFDN-QVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMD 708
             S+    + A  LL   EE+    N + Y  V +GL    ++N + +A  + D++    
Sbjct: 522 GHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL---SKENRFSEAEKICDKMVEQG 578

Query: 709 SSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAA 764
                  Y  L D L   G+ + A  +  + ++R+   N+++ S L   L   G A
Sbjct: 579 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA 634



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 177/366 (48%), Gaps = 10/366 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G V+ A  + +     G     + ++ L+S + + G  + A   F  M    L PN V+Y
Sbjct: 457 GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSY 516

Query: 267 NAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
            A+ID   K G VD    + +   M   G  P+  ++N+++   S+   +  A  + ++M
Sbjct: 517 TALIDGHSKDGKVDI--ALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 574

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V +G+  ++ TY TL+D +C+  +   AF+I  +M  +   PN+ TYS++I G  + G+ 
Sbjct: 575 VEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA 634

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D+A      M  +G      +Y+T++S   + GRF EA  + K+M+  G   D   Y +L
Sbjct: 635 DEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSL 690

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           L  + K  + D   ++F  ++A     +L  Y  LI    K G  +EA  +F    +   
Sbjct: 691 LIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEW 750

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI---IDAFGRSATTEC 562
            AD ++++ L+D L K G ++  + LL  M  +   PN+ TY  +   +   G+S  +E 
Sbjct: 751 NADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEP 810

Query: 563 TVDDVE 568
             D ++
Sbjct: 811 LADKLK 816



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 184/409 (44%), Gaps = 33/409 (8%)

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT----Y 337
           HV EI        V  D  +        S+   ++   N F  M++R +   +F      
Sbjct: 77  HVAEIV------AVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHI 130

Query: 338 NTLLDAICKGAQ-MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
             L+   C+  + +    + + E+       ++ + +T++   AK   ++ A N++ +M 
Sbjct: 131 RILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQML 190

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             GI    +++NT+++I +K G+  EA L+  ++    +  D  TY +L+ G+ +    D
Sbjct: 191 NSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLD 250

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
               +F++M  +   PN +TYSTLI+     G   EA+ +  E  + G++  V  Y+  I
Sbjct: 251 LAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 310

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL--GKQ 574
            ALC     E A+ L+  M K G RPNV TY ++I    R    E  +    + L  G  
Sbjct: 311 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 370

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN-RCRQEI---LCIL 630
             +   +A+ ++    +   GR     +K+F  +     G G   N +   EI   LC+ 
Sbjct: 371 PNTVTYNALINE----LCVGGRFSTA-LKIFHWM----EGHGSLANTQTYNEIIKGLCLG 421

Query: 631 G-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           G       +F+KM K+   P VVT++ ++N      +  +A+ LL+ ++
Sbjct: 422 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 470



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 9/241 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L   G    A + F    KR+   N      S++I  L + GK D A+ + E 
Sbjct: 586 YTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT--YSSLIYGLCQEGKADEAERMSEI 643

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL-VTYNAVIDACGKGG 277
               G   T+  +S L+S   R G   EA  +   MK     P+  + Y+ +I  C    
Sbjct: 644 ----GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLE 699

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           VD  H ++IF  +   G Q     + +L+    + G  E A+ LF+ M+ +  + D   +
Sbjct: 700 VD--HALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVW 757

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             L+D + K  ++DL  +++  M +KN +PN+ TY  +    ++ G+  ++  +  ++K 
Sbjct: 758 TVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKV 817

Query: 398 L 398
           L
Sbjct: 818 L 818


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 205/378 (54%), Gaps = 8/378 (2%)

Query: 181 FAVKREERKNDQGKLASAMISILG--RLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
           F  K   R+  +  L S  I I G  ++GK++ A +I E     G    V  ++ LI  Y
Sbjct: 149 FVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGY 208

Query: 239 ---GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV 295
              G+ G   +A ++   M+   + PN VT+N +ID   K   +    +++F +M R GV
Sbjct: 209 CKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDK-NVSAAMKVFAEMNRQGV 267

Query: 296 QPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAF 354
           +P+ +T+NSL+  +C+ G + EA   L ++MV+  +  +I T+N LL+  CK   +  A 
Sbjct: 268 KPNVVTYNSLINGLCNNGKVNEATA-LRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAG 326

Query: 355 EIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY 414
           E+  +MP + I+PNV TY+ +ID Y K   ++DA  ++  M   G+  D  +YN +++  
Sbjct: 327 ELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGL 386

Query: 415 AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
            + G  E A  +  EM++  ++ D +TYN L+     +G+  +  R+ ++M    + P+ 
Sbjct: 387 CRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQ 446

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           LTY+T+ID Y K G  + A+ +  + ++ G  A+V  Y+ LI   CK   +E A  LL+E
Sbjct: 447 LTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNE 506

Query: 535 MTKEGIRPNVVTYNSIID 552
           M ++G+ PN +TY  + +
Sbjct: 507 MLEKGLIPNRMTYEIVTE 524



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 190/365 (52%), Gaps = 2/365 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++S L ++G++   + +++  +      T+ +F+ +I+   + G   +A  +   MK   
Sbjct: 134 LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG 193

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVE-IFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           +  N++TYN +ID  C  G +   +  + I  +M  +G+ P+ +TFN L+    +     
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVS 253

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AA  +F EM  +G+  ++ TYN+L++ +C   +++ A  +  +M    + PN++T++ ++
Sbjct: 254 AAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALL 313

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G+ K   +  A  +F +M   GI  +  +YN ++  Y K    E+A  + + M   G+ 
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC 373

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  TYN L+ G  ++G  +  R +  +M    +  +L+TY+ LID     G  K+A+++
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             E  + GLK   + Y+ +ID  CK G + +A++L  +M K G   NV TYN +I  F +
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493

Query: 557 SATTE 561
               E
Sbjct: 494 KDKLE 498



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 197/366 (53%), Gaps = 23/366 (6%)

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           ++ EM+ R I+  + ++N +++ +CK  +++ A +I+ +M  + +S NV+TY+T+IDGY 
Sbjct: 150 VYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYC 209

Query: 381 KAGRLDD---ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           K G++     A  +  EM+  GI  + V++N ++  + K      A+ V  EM   G++ 
Sbjct: 210 KMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKP 269

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + VTYN+L+ G    GK +E   + +QM   C+ PN++T++ L++ + K  + K+A ++F
Sbjct: 270 NVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELF 329

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            +  + G+  +V  Y+ LIDA CK+  +E A +L   M  +G+ P+V TYN +I    R 
Sbjct: 330 DDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRK 389

Query: 558 ATTECTVDDVERDLGKQKESANL-----------DAMCSQDDKDVQEAGRTDNQIIKVFG 606
              E       R+L  + ++ +L           D++C++   ++++A R  +++ +  G
Sbjct: 390 GDLEAA-----RNLVSEMDTKHLKADLITYNILIDSLCNKG--EMKKALRLLDEMCRK-G 441

Query: 607 QLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
              ++       +  C++  +   L +  +M K+    NV T++ ++    + +  EDA+
Sbjct: 442 LKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDAN 501

Query: 666 MLLEEL 671
            LL E+
Sbjct: 502 GLLNEM 507



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 166/324 (51%), Gaps = 3/324 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           +G++GK+  A  I +    +G       F+ LI  + +      A+ VF  M R  +KPN
Sbjct: 211 MGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPN 270

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +VTYN++I+  C  G V+      + D M+ + ++P+ IT N+LL    +  + + A  L
Sbjct: 271 VVTYNSLINGLCNNGKVN--EATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGEL 328

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F++M  +GI  ++ TYN L+DA CK   M+ AF +   M  K + P+V TY+ +I G  +
Sbjct: 329 FDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCR 388

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G L+ A N+ SEM    +  D ++YN ++      G  ++AL +  EM   G++   +T
Sbjct: 389 KGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLT 448

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN ++ GY K+G       +  QM+      N+ TY+ LI  + K    ++A  +  E  
Sbjct: 449 YNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEML 508

Query: 502 QAGLKADVVLYSALIDALCKNGLV 525
           + GL  + + Y  + + + + G V
Sbjct: 509 EKGLIPNRMTYEIVTEEMMEKGFV 532



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 143/260 (55%), Gaps = 13/260 (5%)

Query: 314 LWEAARNL--------FNEMVHRGIDQDIFTYNTLLDAICKGAQM-DLAFEIMAEMPAKN 364
           +W  A+NL        F      G+   + + N L+  + K  ++ D+ F +  EM  + 
Sbjct: 100 VWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEF-VYKEMIRRR 158

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE--- 421
           I P +++++ +I+G  K G+L+ A ++  +MK  G+  + ++YNT++  Y K+G+     
Sbjct: 159 IEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMY 218

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           +A  + KEM + GI  + VT+N L+ G+ K        ++F +M    V PN++TY++LI
Sbjct: 219 KADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLI 278

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           +     G   EA  +  +   + LK +++ ++AL++  CKN +V+ A  L D+M K+GI 
Sbjct: 279 NGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGIT 338

Query: 542 PNVVTYNSIIDAFGRSATTE 561
           PNV TYN +IDA+ +    E
Sbjct: 339 PNVTTYNILIDAYCKDENME 358



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 177/351 (50%), Gaps = 35/351 (9%)

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A  K  +  L FE         +  +V + + ++ G  K G + D   ++ EM    I  
Sbjct: 102 AYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEP 161

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR-- 460
             +S+N V++   K+G+  +A  + ++M+  G+  + +TYN L+ GY K GK  ++ +  
Sbjct: 162 TLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKAD 221

Query: 461 -MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            + ++M+AD + PN +T++ LID + K      AM++F E  + G+K +VV Y++LI+ L
Sbjct: 222 AILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGL 281

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
           C NG V  A +L D+M    ++PN++T+N++++ F ++   +    ++  D+ KQ  + N
Sbjct: 282 CNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVK-QAGELFDDMPKQGITPN 340

Query: 580 -------LDAMCSQDDKDVQEA--------GRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                  +DA C   D+++++A        G+     +  +  L+A    +G  E     
Sbjct: 341 VTTYNILIDAYCK--DENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLE----- 393

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 675
                  +  +M    +K +++T++ +++  S CN  E    + + LRL D
Sbjct: 394 ---AARNLVSEMDTKHLKADLITYNILID--SLCNKGE----MKKALRLLD 435



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 174/402 (43%), Gaps = 39/402 (9%)

Query: 355 EIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY 414
           +I+  +   +   N +    ++  YAK  R       F      G+ L   S N ++S  
Sbjct: 79  QILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGL 138

Query: 415 AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
            K+G   +   V KEM    I    +++N ++ G  K GK ++   + E MK   VS N+
Sbjct: 139 VKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANV 198

Query: 475 LTYSTLIDVYSK----GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           +TY+TLID Y K    G +YK A  I +E +  G+  + V ++ LID  CK+  V +A+ 
Sbjct: 199 ITYNTLIDGYCKMGKIGKMYK-ADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMK 257

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAM---CSQ 586
           +  EM ++G++PNVVTYNS+I+    +              GK  E+  L D M   C +
Sbjct: 258 VFAEMNRQGVKPNVVTYNSLINGLCNN--------------GKVNEATALRDQMVNSCLK 303

Query: 587 DDKDVQEA---GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC-----------ILGV 632
            +     A   G   N+++K  G+L  +   QG   N     IL               +
Sbjct: 304 PNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFAL 363

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDN 692
           ++ M    + P+V T++ ++    R    E A  L+ E+     +   + + +L+    N
Sbjct: 364 YRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCN 423

Query: 693 I--WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
                +AL L DE+       +   YN + D     G  R A
Sbjct: 424 KGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAA 465



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 96/175 (54%), Gaps = 5/175 (2%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-C 273
           ++   L +G    V  ++ LI+   R G  + A ++ + M   +LK +L+TYN +ID+ C
Sbjct: 363 LYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLC 422

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQ 332
            KG  + K  + + D+M R G++P ++T+N+++   C  G L  AA NL ++M   G   
Sbjct: 423 NKG--EMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNL-RAALNLRSQMEKVGRLA 479

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           ++ TYN L+   CK  +++ A  ++ EM  K + PN +TY  + +   + G + D
Sbjct: 480 NVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPD 534



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 118/285 (41%), Gaps = 31/285 (10%)

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E  ++   +  D    N +    L+  Y+K    +   + F+     GLK  V   + L+
Sbjct: 76  EQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLM 135

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
             L K G +     +  EM +  I P ++++N +I+   +        D +E D+  +  
Sbjct: 136 SGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIE-DMKVRGV 194

Query: 577 SAN-------LDAMCSQDD-----------KDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
           SAN       +D  C               K+++  G   N++   F  L+    G  K 
Sbjct: 195 SANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEV--TFNILI---DGFCKD 249

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
           +N     +   + VF +M++  +KPNVVT+++++N         +A+ L +++     + 
Sbjct: 250 KN-----VSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKP 304

Query: 679 YGVAH-GLLMGYRDNIWV-QALSLFDEVKLMDSSTASAFYNALTD 721
             + H  LL G+  N  V QA  LFD++     +     YN L D
Sbjct: 305 NIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILID 349


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 187/355 (52%), Gaps = 1/355 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++I  LG+ G+VD A  +FE  L+ G+      +++LI  +   G  ++   +F  + R 
Sbjct: 463 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 522

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             KP+L   N  +D   K G + +    IF+D+   G  PD  +++ L+   ++ G    
Sbjct: 523 GCKPDLTLLNTYMDCVFKAG-EVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARE 581

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
             N+F+ M  +G   D   YN ++D  CK  ++  A+EI+ EM  K + P V TY  ++D
Sbjct: 582 TSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVD 641

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G AK  RLD+A  +F E K  GI L+ V Y++++  + K+GR +EA L+ +EM   G+  
Sbjct: 642 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 701

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +  T+N+LL    K  + +E    F+ MK     PN  TYS LI+   +   Y +A   +
Sbjct: 702 NVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFW 761

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           ++ ++ GL  +VV Y+ +I  L K G +  A SL +     G  P+  ++N++I+
Sbjct: 762 QDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIE 816



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 150/592 (25%), Positives = 258/592 (43%), Gaps = 86/592 (14%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT ++  L   G   +A + FA      ER        + MI   G  G+ + A  + E 
Sbjct: 287 YTSMIWVLCKAGRLGEAEELFA--QMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLER 344

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G   +V +F+++++  G+     EA+S+F  MK+ + +PN  TYN +ID    GG 
Sbjct: 345 LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGG- 402

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +    I D+M    + P+ +T N ++    +    E A  +F     RG + D  TY 
Sbjct: 403 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 462

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L+D + K  Q+D A+ +  +M     + N V Y+++I  +   GR +D   +F E+   
Sbjct: 463 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 522

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKE----------------------------- 429
           G   D    NT +    K G  E+  ++ ++                             
Sbjct: 523 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 582

Query: 430 ------MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
                 M+  G   DA  YNA++ G+ K GK  +   + E+MK  CV P + TY  ++D 
Sbjct: 583 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 642

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            +K     EA  +F E K  G++ +VVLYS+LID   K G ++ A  +L+EM K+G+ PN
Sbjct: 643 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 702

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           V T+NS++DA  ++                  E  N   +C Q  K+++    T    I 
Sbjct: 703 VYTWNSLLDALVKA------------------EEINEALVCFQSMKEMKCPPNTYTYSIL 744

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           + G    +K  +                 +Q M K  + PNVVT++ +++  ++  +  D
Sbjct: 745 INGLCRVQKYNKA-------------FVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD 791

Query: 664 ASMLLEELRL---------FDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKL 706
           A  L E  +          F+  + G+++        N  ++A  +F+E +L
Sbjct: 792 AYSLFERFKANGGIPDAASFNALIEGMSNA-------NRAMEAYQVFEETRL 836



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 249/546 (45%), Gaps = 43/546 (7%)

Query: 210 DLA--KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           DLA  + + E     GYG    A + L +A  R+    +A+     M+R   +P    Y 
Sbjct: 124 DLAALEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYT 183

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            +I A  +     +  +E+   M   G +     F +L+   +R G    A  L +E+  
Sbjct: 184 VLIGALAEARRP-ERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKG 242

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
             ++ DI  YN  +D   K   +D+A++   E+ A+ + P+ V+Y++MI    KAGRL +
Sbjct: 243 SCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGE 302

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +F++M+         +YNT++  Y   GRFE+A  + + +   G     V++N++L 
Sbjct: 303 AEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILT 362

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
             GK+ K DE   +FE MK D   PN  TY+ +ID+   GG  +EA +I  E + A L  
Sbjct: 363 CLGKKRKVDEALSLFEVMKKD-AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFP 421

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           +++  + ++D LCK   +E A  + +  ++ G  P+ VTY S+ID  G+       VD+ 
Sbjct: 422 NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKG----QVDEA 477

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
            R   K                 + +AG   N +  V+  L+      G+KE+  +    
Sbjct: 478 YRLFEK-----------------MLDAGHNANPV--VYTSLIRNFFIHGRKEDGHK---- 514

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGV-A 682
               +F+++ +   KP++   +  ++   +    E   M+ E++R    L D + Y +  
Sbjct: 515 ----IFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 570

Query: 683 HGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
           HGL    +     +  ++F  +K    +  +  YNA+ D     G+   A  ++ E K +
Sbjct: 571 HGLTKAGQAR---ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 627

Query: 743 QVWENV 748
            V   V
Sbjct: 628 CVQPTV 633



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/529 (23%), Positives = 236/529 (44%), Gaps = 68/529 (12%)

Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
            A AV R  +        + +I  L    + + A  +       GY   V+ F+ L+ A 
Sbjct: 165 LAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRAL 224

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
            R G   +A+++ + +K   L+P++V YN  ID  GK G +     + F ++   G++PD
Sbjct: 225 AREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAG-NVDMAWKFFHELKAQGLKPD 283

Query: 299 RITFNSLLAV-CSRGGLWEA----------------------------------ARNLFN 323
            +++ S++ V C  G L EA                                  A  L  
Sbjct: 284 DVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLE 343

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
            +  RG    + ++N++L  + K  ++D A  +  E+  K+  PN  TY+ +ID     G
Sbjct: 344 RLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGG 402

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           R+++A  +  EM+   +  + ++ N ++    K  + EEA  + +     G   D VTY 
Sbjct: 403 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 462

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           +L+ G GK+G+ DE  R+FE+M     + N + Y++LI  +   G  ++  +IF+E  + 
Sbjct: 463 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 522

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           G K D+ L +  +D + K G VE    + +++   G  P+V +Y+ +I    ++      
Sbjct: 523 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKA------ 576

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
                   G+ +E++N+     Q    +    R  N ++  F      K+G+  K     
Sbjct: 577 --------GQARETSNIFHAMKQQGFALD--ARAYNAVVDGFC-----KSGKVHKAYE-- 619

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                   + ++M +  ++P V T+ AI++  ++ +  ++A ML EE +
Sbjct: 620 --------ILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 660


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 200/363 (55%), Gaps = 3/363 (0%)

Query: 183 VKREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           V R  ++  Q  L +   +++ L + G +DLA N+            V  +S +I +  +
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCK 272

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
             +  +A+++F  M+   ++PN++TY+++I +C      +     +  DM+   + P+ +
Sbjct: 273 YRHEDDALNLFTEMENKGVRPNVITYSSLI-SCLCNYERWSDASRLLSDMIERKINPNVV 331

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           TFN+L+    + G    A  L++EM+ R ID DIFTY++L++  C   ++D A  +   M
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
            +K+  PNVVTY+T+I+G+ KA R+D+ + +F EM   G+  + V+Y T++  + +    
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           + A +V K+M S G+  + +TYN LL G  K GK ++   +FE ++   + P + TY+ +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I+   K G  ++   +F      G+K DV++Y+ +I   C+ GL E A +L  +M ++G 
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571

Query: 541 RPN 543
            P+
Sbjct: 572 LPD 574



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 198/357 (55%), Gaps = 7/357 (1%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K   A  + +  +  G    +  +  +++   + G    A ++ N M+   ++ N+V Y+
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264

Query: 268 AVIDACGKGGVDFKH---VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
            VID+  K    ++H    + +F +M   GV+P+ IT++SL++       W  A  L ++
Sbjct: 265 TVIDSLCK----YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+ R I+ ++ T+N L+DA  K  ++  A ++  EM  ++I P++ TYS++I+G+    R
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD+A +MF  M       + V+YNT+++ + K  R +E + + +EM   G+  + VTY  
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G+ +    D  + +F+QM +D V PN++TY+TL+D   K G  ++AM +F   +++ 
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           ++  +  Y+ +I+ +CK G VE    L   ++ +G++P+V+ YN++I  F R    E
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKE 557



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 215/444 (48%), Gaps = 42/444 (9%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKN--DQGKLASAMISILGRLGKVDLA 212
           G+ DY  +LR   +  +   AI  F   VK     +  +  KL SA    + ++ K DL 
Sbjct: 49  GSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSA----IAKMKKFDLV 104

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
            ++ E     G  + +Y ++ LI+ + R      A+++   M +   +P++VT +++++ 
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
              G       V + D M+  G +PD ITF +L+           A  L + MV RG   
Sbjct: 165 YCHGK-RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           ++ TY  +++ +CK   +DLAF ++ +M A  I  NVV YST+ID   K    DDALN+F
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           +EM+  G+  + ++Y++++S      R+ +A  +  +M    I  + VT+NAL+  + K+
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343

Query: 453 GKY-----------------------------------DEVRRMFEQMKADCVSPNLLTY 477
           GK                                    DE + MFE M +    PN++TY
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           +TLI+ + K     E +++FRE  Q GL  + V Y+ LI    +    ++A  +  +M  
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463

Query: 538 EGIRPNVVTYNSIIDAFGRSATTE 561
           +G+ PN++TYN+++D   ++   E
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLE 487



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/514 (25%), Positives = 228/514 (44%), Gaps = 60/514 (11%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K+D A  +F   +      +++ F+ L+SA  +       IS+   M+R  +  NL TYN
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124

Query: 268 AVIDA-CGKG---------------------------------GVDFKHVVEIFDDMLRN 293
            +I+  C +                                  G      V + D M+  
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G +PD ITF +L+           A  L + MV RG   ++ TY  +++ +CK   +DLA
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
           F ++ +M A  I  NVV YST+ID   K    DDALN+F+EM+  G+  + ++Y++++S 
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
                R+ +A  +  +M    I  + VT+NAL+  + K+GK  E  +++++M    + P+
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           + TYS+LI+ +       EA  +F          +VV Y+ LI+  CK   ++  V L  
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424

Query: 534 EMTKEGIRPNVVTYNSIIDAF--------GRSATTECTVDDVERDLGKQKESANLDAMCS 585
           EM++ G+  N VTY ++I  F         +    +   D V  ++     +  LD +C 
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI--MTYNTLLDGLCK 482

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHK 638
                    G+ +  ++ VF  L   K            E +C  G       +F  +  
Sbjct: 483 N--------GKLEKAMV-VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             +KP+V+ ++ +++   R    E+A  L  ++R
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 190/423 (44%), Gaps = 51/423 (12%)

Query: 270 IDACGKG--GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           ID CG    G  F      + ++LRNG+   ++               + A  LF  MV 
Sbjct: 34  IDLCGMCYWGRAFSSGSGDYREILRNGLHSMKL---------------DDAIGLFGGMVK 78

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
                 IF +N LL AI K  + DL   +  +M    IS N+ TY+ +I+ + +  ++  
Sbjct: 79  SRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISL 138

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           AL +  +M  LG     V+ +++L+ Y    R  +A+ +  +M   G R D +T+  L+ 
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           G     K  E   + ++M      PNL+TY  +++   K G    A  +  + + A ++A
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 258

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR----SATTECT 563
           +VV+YS +ID+LCK    + A++L  EM  +G+RPNV+TY+S+I         S  +   
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318

Query: 564 VDDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIK-------------VFGQL 608
            D +ER +     + N  +DA   +    + EA +  +++IK             + G  
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEG--KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
           + ++  + K              +F+ M      PNVVT++ ++N   +    ++   L 
Sbjct: 377 MHDRLDEAKH-------------MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423

Query: 669 EEL 671
            E+
Sbjct: 424 REM 426



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 148/284 (52%), Gaps = 5/284 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L N   WS A +  +  ++R  + N      +A+I    + GK+  A+ +++ 
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIER--KINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +       ++ +S+LI+ +       EA  +F  M   +  PN+VTYN +I+  C    
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D    VE+F +M + G+  + +T+ +L+    +    + A+ +F +MV  G+  +I TY
Sbjct: 416 ID--EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           NTLLD +CK  +++ A  +   +    + P + TY+ MI+G  KAG+++D  ++F  +  
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G+  D + YNT++S + + G  EEA  + ++M   G   D+ T
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/315 (18%), Positives = 133/315 (42%), Gaps = 22/315 (6%)

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           K D+   +F  M      P++  ++ L+   +K   +   + +  + ++ G+  ++  Y+
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF--GRSATTECTVDDVERDL 571
            LI+  C+   +  A++LL +M K G  P++VT +S+++ +  G+  +    + D   ++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 572 GKQKESANLDAMCSQ---DDKDVQEAGRTDNQI-------IKVFGQLVAEKAGQGKKENR 621
           G + ++     +       +K  +     D  +       +  +G +V     +G     
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG----- 239

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV 681
              +I     +  KM   KI+ NVV +S ++++  +    +DA  L  E+     +   +
Sbjct: 240 ---DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296

Query: 682 AHGLLMGYRDNI--WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEG 739
            +  L+    N   W  A  L  ++     +     +NAL D     G+   A+ +  E 
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356

Query: 740 KRRQVWENVWSESCL 754
            +R +  ++++ S L
Sbjct: 357 IKRSIDPDIFTYSSL 371


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 213/403 (52%), Gaps = 3/403 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+    + G+W +A++ F   ++R     D   L+  M S L + GK+  A+++F+T
Sbjct: 305 YNNLIYGYSSTGQWKEAVRVFK-EMRRHSILPDVVTLSMLMGS-LCKYGKIKEARDVFDT 362

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G    V++++ +++ Y   G   +   +F+ M    + P+  T+N +I A    G+
Sbjct: 363 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 422

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K ++ IF++M  +GV+PD +T+ +++A   R G  + A   FN+M+ +G+  D + YN
Sbjct: 423 LDKAMI-IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 481

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+   C    +  A E+++E+    +  ++V +S++I+   K GR+ DA N+F     +
Sbjct: 482 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 541

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D V Y+ ++  Y  +G+ E+AL V   M S+GI  + V Y  L+ GY K G+ DE 
Sbjct: 542 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 601

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +F +M    + P+ + YS +ID   + G    A   F E  ++G+  D+  Y+ ++  
Sbjct: 602 LSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRG 661

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           L KN   + A+ L  E+    ++ N++T N++ID   ++   E
Sbjct: 662 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 704



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 141/541 (26%), Positives = 253/541 (46%), Gaps = 42/541 (7%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V A++ +I  + + G   +A  +F  M +  + P+LVTYN+V+ A C    +D       
Sbjct: 232 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEA--F 289

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M+   V P+  T+N+L+   S  G W+ A  +F EM    I  D+ T + L+ ++CK
Sbjct: 290 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 349

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A ++   M  K  +P+V +Y+ M++GYA  G L D  ++F  M   GI  D  +
Sbjct: 350 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 409

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +N ++  YA  G  ++A+++  EM   G++ D VTY  ++    + GK D+    F QM 
Sbjct: 410 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 469

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V+P+   Y+ LI  +   G   +A ++  E    G+  D+V +S++I+ LCK G V 
Sbjct: 470 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 529

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A ++ D     G+ P+ V Y+ ++D +       C V  +E+ L         DAM S 
Sbjct: 530 DAQNIFDLTVNVGLHPDAVVYSMLMDGY-------CLVGKMEKALRV------FDAMVS- 575

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
                  AG   N +  V+  LV      G+ +          L +F++M +  IKP+ +
Sbjct: 576 -------AGIEPNVV--VYCTLVNGYCKIGRIDEG--------LSLFREMLQRGIKPSTI 618

Query: 647 TFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVA-HGLLMGYRDNIWVQALSLF 701
            +S I++   +      A M   E+       D   Y +   GL   +++  + +A+ LF
Sbjct: 619 LYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGL---FKNRCFDEAIFLF 675

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSS 761
            E++ M+        N + D ++   +   A+ +     R ++  NV + S +  +L+  
Sbjct: 676 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKE 735

Query: 762 G 762
           G
Sbjct: 736 G 736



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 187/379 (49%), Gaps = 39/379 (10%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD+  ++F+  L +G     Y F+ LI AY   G   +A+ +FN M+ + +KP++VTY  
Sbjct: 389 VDMT-DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRT 447

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA--------- 317
           VI A C  G +D    +E F+ M+  GV PD+  +N L+   C+ G L +A         
Sbjct: 448 VIAALCRIGKMD--DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 505

Query: 318 -------------------------ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
                                    A+N+F+  V+ G+  D   Y+ L+D  C   +M+ 
Sbjct: 506 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEK 565

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A  +   M +  I PNVV Y T+++GY K GR+D+ L++F EM   GI    + Y+ ++ 
Sbjct: 566 ALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIID 625

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              + GR   A +   EM  SGI  D  TYN +L G  K   +DE   +F++++A  V  
Sbjct: 626 GLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKI 685

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           N++T +T+ID   +    +EA  +F    ++ L  +VV YS +I  L K GLVE A  + 
Sbjct: 686 NIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMF 745

Query: 533 DEMTKEGIRPNVVTYNSII 551
             M   G  PN    N ++
Sbjct: 746 SSMQNAGCEPNSRLLNHVV 764



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 229/493 (46%), Gaps = 46/493 (9%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRYNLKPNL 263
           R  + +LA   F   L  G    +   + L+  +  +    EA+ +  +        P++
Sbjct: 136 RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDV 195

Query: 264 VTYNAVIDAC---GKGGVDFKHVVEIFDDMLRNGVQ------PDRITFNSLLAVCSRGGL 314
            +Y+ ++ +    GK G          DD+LR   +      P+ + +N+++    + G 
Sbjct: 196 FSYSILLKSLCDQGKSGQA--------DDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 247

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A +LF EMV RGI  D+ TYN+++ A+CK   MD A   + +M  K + PN  TY+ 
Sbjct: 248 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 307

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I GY+  G+  +A+ +F EM+   I  D V+ + ++    K G+ +EA  V   M   G
Sbjct: 308 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 367

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D  +YN +L GY  +G   ++  +F+ M  D ++P+  T++ LI  Y+  G+  +AM
Sbjct: 368 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 427

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            IF E +  G+K DVV Y  +I ALC+ G ++ A+   ++M  +G+ P+   YN +I  F
Sbjct: 428 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 487

Query: 555 --------GRSATTECTVDDVERDLGKQKESANLDAMC-------SQDDKDVQ-EAGRTD 598
                    +   +E   + +  D+     S+ ++ +C       +Q+  D+    G   
Sbjct: 488 CTHGSLLKAKELISEIMNNGMHLDI--VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 545

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
           + +  V+  L+      GK E   R        VF  M    I+PNVV +  ++N   + 
Sbjct: 546 DAV--VYSMLMDGYCLVGKMEKALR--------VFDAMVSAGIEPNVVVYCTLVNGYCKI 595

Query: 659 NSFEDASMLLEEL 671
              ++   L  E+
Sbjct: 596 GRIDEGLSLFREM 608



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 145/576 (25%), Positives = 247/576 (42%), Gaps = 107/576 (18%)

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLV-----TYNAVIDACGKGGVDFKHVVEIFDDM 290
           SA  RSG    A+++FN        P ++     TY  ++D C +     +  +  F  +
Sbjct: 93  SAACRSGPAL-AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRP-ELALAFFGQL 150

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARN--LFNEMVHR----GIDQDIFTYNTLLDAI 344
           LR G++ + I  N LL      G  EA R     + ++HR    G   D+F+Y+ LL ++
Sbjct: 151 LRTGLRVNIIIANHLLE-----GFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 205

Query: 345 C---KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           C   K  Q D    +MAE  A   SPNVV Y+T+IDG+ K G ++ A ++F EM   GI 
Sbjct: 206 CDQGKSGQADDLLRMMAEGGAV-CSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP 264

Query: 402 LDRVSYNTVLSI-----------------------------------YAKLGRFEEALLV 426
            D V+YN+V+                                     Y+  G+++EA+ V
Sbjct: 265 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 324

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            KEM    I  D VT + L+G   K GK  E R +F+ M     +P++ +Y+ +++ Y+ 
Sbjct: 325 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 384

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G   +   +F      G+  D   ++ LI A    G+++ A+ + +EM   G++P+VVT
Sbjct: 385 KGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVT 444

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF- 605
           Y ++I A  R              +GK  ++  ++      D+ V       N +I+ F 
Sbjct: 445 YRTVIAALCR--------------IGKMDDA--MEKFNQMIDQGVAPDKYAYNCLIQGFC 488

Query: 606 --------GQLVAEKAGQGKK----------ENRCR-QEILCILGVFQKMHKLKIKPNVV 646
                    +L++E    G             N C+   ++    +F     + + P+ V
Sbjct: 489 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 548

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQVYG-------VAHGLLMGY-RDNIWVQAL 698
            +S +++        E A      LR+FD  V         V   L+ GY +     + L
Sbjct: 549 VYSMLMDGYCLVGKMEKA------LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 602

Query: 699 SLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
           SLF E+       ++  Y+ + D L+  G+   A++
Sbjct: 603 SLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKM 638



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/197 (18%), Positives = 81/197 (41%), Gaps = 34/197 (17%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           +GK++ A  +F+  ++ G    V  +  L++ Y + G   E +S+F  M +  +KP+ + 
Sbjct: 560 VGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 619

Query: 266 YNAVIDACGKGGVD----------------------------------FKHVVEIFDDML 291
           Y+ +ID   + G                                    F   + +F ++ 
Sbjct: 620 YSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELR 679

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
              V+ + IT N+++    +    E A++LF  +    +  ++ TY+ ++  + K   ++
Sbjct: 680 AMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVE 739

Query: 352 LAFEIMAEMPAKNISPN 368
            A ++ + M      PN
Sbjct: 740 EAEDMFSSMQNAGCEPN 756


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 213/403 (52%), Gaps = 3/403 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+    + G+W +A++ F   ++R     D   L+  M S L + GK+  A+++F+T
Sbjct: 292 YNNLIYGYSSTGQWKEAVRVFK-EMRRHSILPDVVTLSMLMGS-LCKYGKIKEARDVFDT 349

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G    V++++ +++ Y   G   +   +F+ M    + P+  T+N +I A    G+
Sbjct: 350 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 409

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K ++ IF++M  +GV+PD +T+ +++A   R G  + A   FN+M+ +G+  D + YN
Sbjct: 410 LDKAMI-IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 468

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+   C    +  A E+++E+    +  ++V +S++I+   K GR+ DA N+F     +
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D V Y+ ++  Y  +G+ E+AL V   M S+GI  + V Y  L+ GY K G+ DE 
Sbjct: 529 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 588

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +F +M    + P+ + YS +ID   + G    A   F E  ++G+  D+  Y+ ++  
Sbjct: 589 LSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRG 648

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           L KN   + A+ L  E+    ++ N++T N++ID   ++   E
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 691



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 186/379 (49%), Gaps = 39/379 (10%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD+  ++F+  L +G     Y F+ LI AY   G   +A+ +FN M+ + +KP++VTY  
Sbjct: 376 VDMT-DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRT 434

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA--------- 317
           VI A C  G +D    +E F+ M+  GV PD+  +N L+   C+ G L +A         
Sbjct: 435 VIAALCRIGKMD--DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 492

Query: 318 -------------------------ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
                                    A+N+F+  V+ G+  D   Y+ L+D  C   +M+ 
Sbjct: 493 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEK 552

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A  +   M +  I PNVV Y T+++GY K GR+D+ L++F EM   GI    + Y+ ++ 
Sbjct: 553 ALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIID 612

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              + GR   A +   EM  SGI  D  TYN +L G  K   +DE   +F++++A  V  
Sbjct: 613 GLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKI 672

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           N++T +T+ID   +    +EA  +F    ++ L   VV YS +I  L K GLVE A  + 
Sbjct: 673 NIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMF 732

Query: 533 DEMTKEGIRPNVVTYNSII 551
             M   G  PN    N ++
Sbjct: 733 SSMQNAGCEPNSRLLNHVV 751



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 139/541 (25%), Positives = 253/541 (46%), Gaps = 42/541 (7%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V A++ +I  + + G   +A  +F  M +  + P+LVTYN+V+ A C    +D       
Sbjct: 219 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEA--F 276

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M+   V P+  T+N+L+   S  G W+ A  +F EM    I  D+ T + L+ ++CK
Sbjct: 277 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A ++   M  K  +P+V +Y+ M++GYA  G L D  ++F  M   GI  D  +
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 396

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +N ++  YA  G  ++A+++  EM   G++ D VTY  ++    + GK D+    F QM 
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V+P+   Y+ LI  +   G   +A ++  E    G+  D+V +S++I+ LCK G V 
Sbjct: 457 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 516

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A ++ D     G+ P+ V Y+ ++D +       C V  +E+ L         DAM S 
Sbjct: 517 DAQNIFDLTVNVGLHPDAVVYSMLMDGY-------CLVGKMEKALRV------FDAMVS- 562

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
                  AG   N +  V+  LV      G+ +          L +F++M +  IKP+ +
Sbjct: 563 -------AGIEPNVV--VYCTLVNGYCKIGRIDEG--------LSLFREMLQRGIKPSTI 605

Query: 647 TFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVA-HGLLMGYRDNIWVQALSLF 701
            +S I++   +      A +   E+       D   Y +   GL   +++  + +A+ LF
Sbjct: 606 LYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGL---FKNRCFDEAIFLF 662

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSS 761
            E++ M+        N + D ++   +   A+ +     R ++  +V + S +  +L+  
Sbjct: 663 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKE 722

Query: 762 G 762
           G
Sbjct: 723 G 723



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 229/493 (46%), Gaps = 46/493 (9%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRYNLKPNL 263
           R  + +LA   F   L  G    +   + L+  +  +    EA+ +  +        P++
Sbjct: 123 RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDV 182

Query: 264 VTYNAVIDAC---GKGGVDFKHVVEIFDDMLRNGVQ------PDRITFNSLLAVCSRGGL 314
            +Y+ ++ +    GK G          DD+LR   +      P+ + +N+++    + G 
Sbjct: 183 FSYSILLKSLCDQGKSGQA--------DDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 234

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A +LF EMV RGI  D+ TYN+++ A+CK   MD A   + +M  K + PN  TY+ 
Sbjct: 235 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 294

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I GY+  G+  +A+ +F EM+   I  D V+ + ++    K G+ +EA  V   M   G
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 354

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D  +YN +L GY  +G   ++  +F+ M  D ++P+  T++ LI  Y+  G+  +AM
Sbjct: 355 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 414

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            IF E +  G+K DVV Y  +I ALC+ G ++ A+   ++M  +G+ P+   YN +I  F
Sbjct: 415 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 474

Query: 555 --------GRSATTECTVDDVERDLGKQKESANLDAMC-------SQDDKDVQ-EAGRTD 598
                    +   +E   + +  D+     S+ ++ +C       +Q+  D+    G   
Sbjct: 475 CTHGSLLKAKELISEIMNNGMHLDI--VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 532

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
           + +  V+  L+      GK E   R        VF  M    I+PNVV +  ++N   + 
Sbjct: 533 DAV--VYSMLMDGYCLVGKMEKALR--------VFDAMVSAGIEPNVVVYCTLVNGYCKI 582

Query: 659 NSFEDASMLLEEL 671
              ++   L  E+
Sbjct: 583 GRIDEGLSLFREM 595



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 194/405 (47%), Gaps = 5/405 (1%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           D YTF  L++   N G   KA+    F   R+            +I+ L R+GK+D A  
Sbjct: 393 DFYTFNVLIKAYANCGMLDKAM--IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 450

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
            F   +++G     YA++ LI  +   G   +A  + + +    +  ++V ++++I+   
Sbjct: 451 KFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 510

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K G        IFD  +  G+ PD + ++ L+      G  E A  +F+ MV  GI+ ++
Sbjct: 511 KLG-RVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 569

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
             Y TL++  CK  ++D    +  EM  + I P+ + YS +IDG  +AGR   A   F E
Sbjct: 570 VVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHE 629

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   GI +D  +YN VL    K   F+EA+ + KE+ +  ++ + +T N ++ G  +  +
Sbjct: 630 MTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 689

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            +E + +F  +    + P+++TYS +I    K GL +EA  +F   + AG + +  L + 
Sbjct: 690 VEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNH 749

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
           ++  L K   +  A + L ++ +       +T   ++D F    T
Sbjct: 750 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGT 794



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 145/576 (25%), Positives = 247/576 (42%), Gaps = 107/576 (18%)

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLV-----TYNAVIDACGKGGVDFKHVVEIFDDM 290
           SA  RSG    A+++FN        P ++     TY  ++D C +     +  +  F  +
Sbjct: 80  SAACRSGPAL-AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRP-ELALAFFGQL 137

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARN--LFNEMVHR----GIDQDIFTYNTLLDAI 344
           LR G++ + I  N LL      G  EA R     + ++HR    G   D+F+Y+ LL ++
Sbjct: 138 LRTGLRVNIIIANHLLE-----GFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 192

Query: 345 C---KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           C   K  Q D    +MAE  A   SPNVV Y+T+IDG+ K G ++ A ++F EM   GI 
Sbjct: 193 CDQGKSGQADDLLRMMAEGGAV-CSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP 251

Query: 402 LDRVSYNTVLSI-----------------------------------YAKLGRFEEALLV 426
            D V+YN+V+                                     Y+  G+++EA+ V
Sbjct: 252 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 311

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            KEM    I  D VT + L+G   K GK  E R +F+ M     +P++ +Y+ +++ Y+ 
Sbjct: 312 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 371

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G   +   +F      G+  D   ++ LI A    G+++ A+ + +EM   G++P+VVT
Sbjct: 372 KGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVT 431

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF- 605
           Y ++I A  R              +GK  ++  ++      D+ V       N +I+ F 
Sbjct: 432 YRTVIAALCR--------------IGKMDDA--MEKFNQMIDQGVAPDKYAYNCLIQGFC 475

Query: 606 --------GQLVAEKAGQGKK----------ENRCR-QEILCILGVFQKMHKLKIKPNVV 646
                    +L++E    G             N C+   ++    +F     + + P+ V
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 535

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQVYG-------VAHGLLMGY-RDNIWVQAL 698
            +S +++        E A      LR+FD  V         V   L+ GY +     + L
Sbjct: 536 VYSMLMDGYCLVGKMEKA------LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 589

Query: 699 SLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
           SLF E+       ++  Y+ + D L+  G+   A++
Sbjct: 590 SLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKV 625


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 212/436 (48%), Gaps = 54/436 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRL-------GKVDL 211
           Y+ LL  L   G+ ++A + F   +++  + N         ++I G L       G +  
Sbjct: 377 YSLLLDYLCKNGKCTEARKIFYCMIRKGIKPN---------VTIYGILLHGYAARGAIAD 427

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
             ++ +  +  G     Y F+ ++ AY +     EA+ +F+ M ++ L P++VTY  +ID
Sbjct: 428 LTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILID 487

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           A C  G VD    V  F+ M+ +GV P+ + FNSL+        WE A  LF EM  +G+
Sbjct: 488 ALCKLGRVD--DAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGV 545

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             ++  +NT++  +C   Q+ +A  ++  M    + PNV++Y+T+I G+  AGR D+A  
Sbjct: 546 RPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQ 605

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +   M  +G+  D +SY+T+L  Y K GR + A  + +EM   G+   AVTY+ +L G  
Sbjct: 606 LLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLF 665

Query: 451 KQGKYDEVRRMFEQM--------------------KADCVS---------------PNLL 475
              ++ E + ++  M                    K +CV                PN++
Sbjct: 666 HTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNII 725

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           T++ +IDV  KGG  K+AM +F      GL  +VV Y  ++  + + GL++   +L   M
Sbjct: 726 TFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAM 785

Query: 536 TKEGIRPNVVTYNSII 551
            K G  P+ V  N+II
Sbjct: 786 EKSGCTPDSVMLNAII 801



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 143/544 (26%), Positives = 244/544 (44%), Gaps = 46/544 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L +   VD A+ + +  +++G    V  ++ +I    ++     A  V   M  
Sbjct: 238 STIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMID 297

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             +KP++VTYN +ID  C    VD      +   M+   V+PD  T+N L+      G W
Sbjct: 298 KGVKPDVVTYNTIIDGLCKAQAVD--RADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEW 355

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +       EM  RG+D D+ TY+ LLD +CK  +   A +I   M  K I PNV  Y  +
Sbjct: 356 KEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGIL 415

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + GYA  G + D  ++   M   GI  +   +N VL  YAK    +EA+ +   M   G+
Sbjct: 416 LHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGL 475

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VTY  L+    K G+ D+    F QM  D V+PN + +++L+        +++A +
Sbjct: 476 SPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEE 535

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F E    G++ +VV ++ ++  LC  G V  A  L+D M + G+RPNV++YN++I    
Sbjct: 536 LFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHC 595

Query: 556 RSATTE--CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
            +  T+    + DV   +G + +  + D +     +   + GR DN              
Sbjct: 596 LAGRTDEAAQLLDVMVSVGLKPDLISYDTLL----RGYCKTGRIDNAYC----------- 640

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML----LE 669
                             +F++M +  + P  VT+S IL        F +A  L    ++
Sbjct: 641 ------------------LFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIK 682

Query: 670 ELRLFDNQVYGVA-HGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
             + +D   Y +  +GL    + N   +A  +F  +   D       +  + D+L+  G+
Sbjct: 683 SGQQWDIYTYNIILNGLC---KTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGR 739

Query: 729 KRGA 732
           K+ A
Sbjct: 740 KKDA 743



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 172/654 (26%), Positives = 282/654 (43%), Gaps = 100/654 (15%)

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR---SGYCQEAISVFNSMKRY--- 257
           G LG +D A  +F+  L      +V AF+ L++   R   S   + A+S+FN M R    
Sbjct: 26  GSLG-IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSN 84

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
            ++P+L TY +++  C       +H    F  +L+ G + + +  N LL  +C    + E
Sbjct: 85  KVRPDLCTY-SILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDE 143

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI---MAEMPAKNISPNVVTYS 373
           A   L   M   G   ++ + NTLL  +C   +++ A E+   MAE    N +PNVVTY+
Sbjct: 144 AMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYN 203

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+IDG  KA  +D A  +   M   G+ LD V+Y+T++    K    + A  V + M   
Sbjct: 204 TIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDK 263

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG------ 487
           G++ D VTYN ++ G  K    D    + + M    V P+++TY+T+ID   K       
Sbjct: 264 GVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRA 323

Query: 488 -----------------------------GLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
                                        G +KE ++   E    GL  DVV YS L+D 
Sbjct: 324 DGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDY 383

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF-GRSATTECTVDDVERDLGKQKES 577
           LCKNG    A  +   M ++GI+PNV  Y  ++  +  R A  + T      DL      
Sbjct: 384 LCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLT------DL------ 431

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
             LD M       V      +N I  +     A+KA   +            + +F +M 
Sbjct: 432 --LDLM-------VANGISPNNYIFNIVLCAYAKKAMIDEA-----------MHIFSRMS 471

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL---------RLFDNQVYGVAHGLLMG 688
           +  + P+VVT+  +++A  +    +DA +   ++          +F++ VYG+       
Sbjct: 472 QHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTV---- 527

Query: 689 YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENV 748
              + W +A  LF E+          F+N +   L + GQ   AQ ++   +R  V  NV
Sbjct: 528 ---DRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNV 584

Query: 749 WS-ESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKV 801
            S  + +  H +   A R    A LL++   V    +L    ++L G+ K  ++
Sbjct: 585 ISYNTLIGGHCL---AGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRI 635



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 176/359 (49%), Gaps = 3/359 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L +LG+VD A   F   +N+G       F++L+         ++A  +F  M    
Sbjct: 485 LIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQG 544

Query: 259 LKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           ++PN+V +N ++ + C +G V       + D M R GV+P+ I++N+L+      G  + 
Sbjct: 545 VRPNVVFFNTIMCNLCNEGQVMVAQ--RLIDSMERVGVRPNVISYNTLIGGHCLAGRTDE 602

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  L + MV  G+  D+ +Y+TLL   CK  ++D A+ +  EM  K ++P  VTYST++ 
Sbjct: 603 AAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQ 662

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G     R  +A  ++  M   G   D  +YN +L+   K    +EA  + + + S  +R 
Sbjct: 663 GLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRP 722

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + +T+  ++    K G+  +   +F  + +  + PN++TY  ++    + GL  E   +F
Sbjct: 723 NIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLF 782

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
              +++G   D V+ +A+I +L   G +  A + L ++ +        T + +I  F R
Sbjct: 783 LAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSR 841



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 176/396 (44%), Gaps = 41/396 (10%)

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG---GLWEAARNLFNE 324
            + D    G +     +++FD++L +        FN LL V +R       E A +LFN 
Sbjct: 18  VIADRARSGSLGIDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNR 77

Query: 325 MVH---RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           M       +  D+ TY+ L    C+  +++  F     +       N V  + +++G   
Sbjct: 78  MARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCD 137

Query: 382 AGRLDDALN-MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG---IRK 437
           A R+D+A++ +   M   G   + VS NT+L       R EEAL +   M   G      
Sbjct: 138 AKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTP 197

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + VTYN ++ G  K    D    + + M    V  +++TYST+ID   K      A  + 
Sbjct: 198 NVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVL 257

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           +     G+K DVV Y+ +ID LCK   V+ A  +L  M  +G++P+VVTYN+IID     
Sbjct: 258 QHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGL--- 314

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
               C    V+R  G  +            DKDV+   +T N +I   G L     G+ K
Sbjct: 315 ----CKAQAVDRADGVLQHMI---------DKDVKPDIQTYNCLIH--GYL---STGEWK 356

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
           +          ++   ++M+   + P+VVT+S +L+
Sbjct: 357 E----------VVRRLEEMYARGLDPDVVTYSLLLD 382


>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Glycine max]
          Length = 680

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 199/398 (50%), Gaps = 1/398 (0%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           +Y+ +++ L    +    I    +A    ++    G L + +I    + G    A     
Sbjct: 206 NYSSIIQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLA 265

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
            A + G         A+I A G SG   EA ++F  ++   L+P    YNA++    + G
Sbjct: 266 MAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTG 325

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              K    +  +M + GV+PD  T++ L+ V +  G WE+AR +  EM    +  + + +
Sbjct: 326 -SLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVF 384

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           + +L       +   +F+++ +M +  + P+   Y+ MID + K   LD A+  F  M  
Sbjct: 385 SRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLS 444

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI  D V++NT++  + K GR + A  +  EM+  G      TYN ++   G+Q ++++
Sbjct: 445 EGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQ 504

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
           V     +M++  + PN +TY+TL+DVY K G + +A++     K  G K    +Y+ALI+
Sbjct: 505 VTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALIN 564

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           A  + GL E AV+    MT EG+ P+++  NS+I+AFG
Sbjct: 565 AYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFG 602



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 196/408 (48%), Gaps = 36/408 (8%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
           G+ ++A++  A A  +    N +     A+I  LG  G+   A+ +FE     G      
Sbjct: 255 GDPTRAMRFLAMA--QSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTR 312

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV----------- 278
           A++AL+  Y R+G  ++A  V + M++  +KP+  TY+ +ID     G            
Sbjct: 313 AYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEM 372

Query: 279 -----------------------DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
                                  +++   ++  DM  +GVQPDR  +N ++    +    
Sbjct: 373 EASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCL 432

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A   F  M+  GI  DI T+NTL+D  CK  + D+A E+ +EM  +  SP + TY+ M
Sbjct: 433 DHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIM 492

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+   +  R +      S+M+  G+  + ++Y T++ +Y K GRF +A+   + ++S+G 
Sbjct: 493 INSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGF 552

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           +  +  YNAL+  Y ++G  +     F  M  + ++P+LL  ++LI+ + +     EA  
Sbjct: 553 KPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFA 612

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           + +  K+  ++ DVV Y+ L+ AL +    +   ++ +EM   G  P+
Sbjct: 613 VLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASGCTPD 660



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 126/523 (24%), Positives = 242/523 (46%), Gaps = 57/523 (10%)

Query: 195 LASAMISILGRLGKVDLAKNIFET-ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           L S +I+ LGR      ++ ++E   L++    T   ++ALI A  R+G  ++A+++ + 
Sbjct: 141 LYSILINALGR------SEKLYEAFLLSQRQVLTPLTYNALIGACARNGDVEKALNLMSK 194

Query: 254 MKRYNLKPNLVTYNAVIDACGKGG-----VDFKHVVEIFDDMLR---------------- 292
           M+R   +P+ V Y+++I    +       +  K   EI  D +                 
Sbjct: 195 MRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKA 254

Query: 293 ---------------NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
                          NG+ P   T  +++      G    A  LF E+   G++     Y
Sbjct: 255 GDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAY 314

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N LL    +   +  A  +++EM    + P+  TYS +ID YA AGR + A  +  EM+ 
Sbjct: 315 NALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEA 374

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             +  +   ++ +L+ Y   G ++++  V K+M+SSG++ D   YN ++  +GK    D 
Sbjct: 375 SNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDH 434

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
               FE+M ++ + P+++T++TLID + K G +  A ++F E +Q G    +  Y+ +I+
Sbjct: 435 AMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMIN 494

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA----TTECTVDDVERDLGK 573
           ++ +    E   + L +M  +G++PN +TY +++D +G+S       EC   +V +  G 
Sbjct: 495 SMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECL--EVLKSTGF 552

Query: 574 QKESANLDAMC-SQDDKDVQEAGRTDNQIIKVFG----QLVAEKAGQGKKENRCRQEILC 628
           +  S   +A+  +   + + E      +++   G     L          E+R   E   
Sbjct: 553 KPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFA 612

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +L   Q M +  I+P+VVT++ ++ A  R   F+    + EE+
Sbjct: 613 VL---QYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEM 652



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 163/323 (50%), Gaps = 5/323 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I +    G+ + A+ + +           Y FS +++ Y   G  Q++  V   MK 
Sbjct: 350 SLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKS 409

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P+   YN +ID  GK      H +  F+ ML  G+ PD +T+N+L+    + G  +
Sbjct: 410 SGVQPDRHFYNVMIDTFGKYNC-LDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHD 468

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF+EM  RG    I TYN +++++ +  + +     +++M ++ + PN +TY+T++
Sbjct: 469 MAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLV 528

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y K+GR  DA+     +K  G       YN +++ YA+ G  E A+   + M + G+ 
Sbjct: 529 DVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLT 588

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              +  N+L+  +G+  +  E   + + MK + + P+++TY+TL+    +   +++   +
Sbjct: 589 PSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAV 648

Query: 497 FREFKQAGL----KADVVLYSAL 515
           + E   +G     KA  +L SAL
Sbjct: 649 YEEMVASGCTPDRKARAMLRSAL 671



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 111/522 (21%), Positives = 229/522 (43%), Gaps = 76/522 (14%)

Query: 247 AISVFNSMKRYNLKPNL-VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A +V + ++++NL  +  + Y+ +I+A G+     + + E F    R  + P  +T+N+L
Sbjct: 122 AYAVVSWLQKHNLCFSYELLYSILINALGRS----EKLYEAFLLSQRQVLTP--LTYNAL 175

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD-------------- 351
           +  C+R G  E A NL ++M   G   D   Y++++  + +  ++D              
Sbjct: 176 IGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYAEIETD 235

Query: 352 -----------------------LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
                                   A   +A   +  ++P   T   +I     +GR  +A
Sbjct: 236 KIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEA 295

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             +F E++  G+     +YN +L  Y + G  ++A  V  EME +G++ D  TY+ L+  
Sbjct: 296 EALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDV 355

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           Y   G+++  R + ++M+A  V PN   +S ++  Y   G ++++ Q+ ++ K +G++ D
Sbjct: 356 YAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPD 415

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
              Y+ +ID   K   ++ A++  + M  EGI P++VT+N++ID         C      
Sbjct: 416 RHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLID---------CHCKSGR 466

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
            D+ ++  S            ++Q+ G +    I  +  ++     Q + E         
Sbjct: 467 HDMAEELFS------------EMQQRGYSP--CITTYNIMINSMGEQQRWEQ-------- 504

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
           +     KM    ++PN +T++ +++   +   F DA   LE L+    +     +  L+ 
Sbjct: 505 VTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALIN 564

Query: 689 YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKR 730
                 +  L++ +  +LM +   +    AL  ++  FG+ R
Sbjct: 565 AYAQRGLSELAV-NAFRLMTTEGLTPSLLALNSLINAFGEDR 605


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 147/470 (31%), Positives = 226/470 (48%), Gaps = 35/470 (7%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I +LGR GK++ A  I +   +EG G  V  ++ LI A   +     A  VF  MK    
Sbjct: 267 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRH 326

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAA 318
           KP+ VTY  ++D       D   V + + +M ++G  PD +TF  L+ A+C  G   EA 
Sbjct: 327 KPDRVTYITLLDRFSDNR-DLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 385

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L + M  +GI  ++ TYNTL+  + +  ++D A EI   M +  + P   TY   ID 
Sbjct: 386 AKL-DVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDY 444

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y K+G    AL  F +MK  GI  + V+ N  L   AK GR  EA  +   ++  G+  D
Sbjct: 445 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 504

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           +VTYN ++  Y K G+ DE  ++  +M  +C  P+++  ++LI+   K     EA ++F 
Sbjct: 505 SVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFM 564

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
             K+  LK  VV Y+ L+  L KNG ++ A+ L + M ++G  PN +T+N++ D      
Sbjct: 565 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD------ 618

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
              C   + E  L  +     +D  C  D         T N II  FG +   K GQ K 
Sbjct: 619 ---CLCKNDEVTLALKMLFKMMDMGCVPD-------VFTYNTII--FGLV---KNGQVK- 662

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
                 E +C    F +M KL + P+ VT   +L    +    EDA  ++
Sbjct: 663 ------EAMCF---FHQMKKL-VYPDFVTLCTLLPGVVKAGLIEDAYKII 702



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/354 (33%), Positives = 182/354 (51%), Gaps = 24/354 (6%)

Query: 210  DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
            DL  +I   A   G  N V +FS  + A   +G C++  S+   + RY+ K N       
Sbjct: 720  DLMGSILAEA---GIDNAV-SFSERLVA---NGICRDGDSILVPIIRYSFKHN------- 765

Query: 270  IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
             +A G      + + E F   L  GVQP   T+N L+       + E A+++F ++ + G
Sbjct: 766  -NASGA-----RMLFEKFTKDL--GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTG 817

Query: 330  IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
               D+ TYN LLDA  K  ++D  FEI  EM A    PN +T++ +I G  KAG +DDAL
Sbjct: 818  CIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDAL 877

Query: 390  NMFSE-MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            +++ + M          +Y  ++   +K GR  EA  + + M   G R +   YN L+ G
Sbjct: 878  DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILING 937

Query: 449  YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            +GK G+ D    +F++M  + V P+L TYS L+D     G   E +  FRE K++GL  D
Sbjct: 938  FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPD 997

Query: 509  VVLYSALIDALCKNGLVESAVSLLDEMTK-EGIRPNVVTYNSIIDAFGRSATTE 561
            VV Y+ +I+ L K   +E A+ L +EM K  GI P++ TYNS+I   G +   E
Sbjct: 998  VVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVE 1051



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 207/447 (46%), Gaps = 32/447 (7%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G+    Y+++ LI    +S +C EA+ V+  M     +P+L TY++++   GK   D + 
Sbjct: 185 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRR-DIES 243

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           V+ +  +M   G++P+  TF   + V  R G    A  +   M   G   D+ TY  L+D
Sbjct: 244 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 303

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A+C   ++D A E+ A+M      P+ VTY T++D ++    LD     +SEM+  G   
Sbjct: 304 ALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVP 363

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D V++  ++    K G F EA      M   GI  +  TYN L+ G  +  + D+   +F
Sbjct: 364 DVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIF 423

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           + M++  V P   TY   ID Y K G    A++ F + K  G+  ++V  +A + +L K 
Sbjct: 424 DNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 483

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           G    A  +   +   G+ P+ VTYN ++  + +       +D+  + L +  E+     
Sbjct: 484 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG----EIDEAIKLLSEMVEN----- 534

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
            C + D  V       N +I    +  A++  +  K             +F +M ++K+K
Sbjct: 535 -CCEPDVIVV------NSLINTLYK--ADRVDEAWK-------------MFMRMKEMKLK 572

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLE 669
           P VVT++ +L    +    ++A  L E
Sbjct: 573 PTVVTYNTLLAGLGKNGKIQEAIELFE 599



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 133/536 (24%), Positives = 238/536 (44%), Gaps = 76/536 (14%)

Query: 179 FAFAVKREERKNDQGKLAS-----AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSA 233
           F  A  + +   DQG L +      +I  L R+ ++D A  IF+   + G   T Y +  
Sbjct: 381 FGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIV 440

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN 293
            I  YG+SG    A+  F  MK   + PN+V  NA + +  K G D +   +IF  +   
Sbjct: 441 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD-REAKQIFYGLKDI 499

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G+ PD +T+N ++   S+ G  + A  L +EMV    + D+   N+L++ + K  ++D A
Sbjct: 500 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEA 559

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
           +++   M    + P VVTY+T++ G  K G++ +A+ +F  M   G   + +++NT+   
Sbjct: 560 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 619

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
             K      AL +  +M   G   D  TYN ++ G  K G+  E    F QMK   V P+
Sbjct: 620 LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-LVYPD 678

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREF---------------------KQAGLKADVVLY 512
            +T  TL+    K GL ++A +I   F                      +AG+   V   
Sbjct: 679 FVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFS 738

Query: 513 SALI-DALCKNG---LV------------ESAVSLLDEMTKE-GIRPNVVTYNSIIDAFG 555
             L+ + +C++G   LV              A  L ++ TK+ G++P + TYN +I    
Sbjct: 739 ERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGL- 797

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
                E  + ++ +D+  Q ++      C  D         T N ++  +G+        
Sbjct: 798 ----LEADMIEIAQDVFLQVKNTG----CIPDVA-------TYNFLLDAYGK-------S 835

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           GK +         +  ++++M   + +PN +T + +++   +  + +DA  L  +L
Sbjct: 836 GKIDE--------LFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDL 883



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 165/323 (51%), Gaps = 3/323 (0%)

Query: 230  AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
             ++ LI     +   + A  VF  +K     P++ TYN ++DA GK G     + EI+ +
Sbjct: 789  TYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSG-KIDELFEIYKE 847

Query: 290  MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE-MVHRGIDQDIFTYNTLLDAICKGA 348
            M  +  +P+ IT N +++   + G  + A +L+ + M  R       TY  L+D + K  
Sbjct: 848  MSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 907

Query: 349  QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            ++  A ++   M      PN   Y+ +I+G+ KAG  D A  +F  M   G+  D  +Y+
Sbjct: 908  RLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 967

Query: 409  TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK-A 467
             ++     +GR +E L   +E++ SG+  D V YN ++ G GK  + +E   +F +MK +
Sbjct: 968  VLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKS 1027

Query: 468  DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
              ++P+L TY++LI      G+ +EA +I+ E ++AGL+ +V  ++ALI     +G  E 
Sbjct: 1028 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH 1087

Query: 528  AVSLLDEMTKEGIRPNVVTYNSI 550
            A ++   M   G  PN  TY  +
Sbjct: 1088 AYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 133/557 (23%), Positives = 231/557 (41%), Gaps = 125/557 (22%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            M+    ++G++D A  +    +       V   ++LI+   ++    EA  +F  MK   
Sbjct: 511  MMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 570

Query: 259  LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
            LKP +VTYN ++   GK G   +  +E+F+ M++ G  P+ ITFN+L   +C    +  A
Sbjct: 571  LKPTVVTYNTLLAGLGKNG-KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 629

Query: 318  ARNLFNEMVHRGIDQDIFTYN----------------------------------TLLDA 343
             + LF +M+  G   D+FTYN                                  TLL  
Sbjct: 630  LKMLF-KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPG 688

Query: 344  ICKGAQMDLAFEIMAEM--PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE------- 394
            + K   ++ A++I+A       +   N+     M    A+AG +D+A++ FSE       
Sbjct: 689  VVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAG-IDNAVS-FSERLVANGI 746

Query: 395  -------------------------------MKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
                                            K LG+     +YN ++    +    E A
Sbjct: 747  CRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 806

Query: 424  LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
              V  +++++G   D  TYN LL  YGK GK DE+  ++++M A    PN +T++ +I  
Sbjct: 807  QDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISG 866

Query: 484  YSKGGLYKEAMQIFREF-KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
              K G   +A+ ++ +             Y  LID L K+G +  A  L + M+  G RP
Sbjct: 867  LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRP 926

Query: 543  NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII 602
            N   YN +I+ FG++                       DA C+   + V+E  R D   +
Sbjct: 927  NCAIYNILINGFGKAGEA--------------------DAACALFKRMVKEGVRPD---L 963

Query: 603  KVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNAC 655
            K +  LV               + LC++G        F+++ +  + P+VV ++ I+N  
Sbjct: 964  KTYSVLV---------------DCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGL 1008

Query: 656  SRCNSFEDASMLLEELR 672
             + +  E+A +L  E++
Sbjct: 1009 GKFHRLEEALVLFNEMK 1025



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 107/199 (53%), Gaps = 4/199 (2%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            +I  L + G++  AK +FE   + G       ++ LI+ +G++G    A ++F  M +  
Sbjct: 899  LIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 958

Query: 259  LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            ++P+L TY+ ++D  C  G VD    +  F ++  +G+ PD + +N ++    +    E 
Sbjct: 959  VRPDLKTYSVLVDCLCMVGRVD--EGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEE 1016

Query: 318  ARNLFNEMVH-RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LFNEM   RGI  D++TYN+L+  +     ++ A +I  E+    + PNV T++ +I
Sbjct: 1017 ALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1076

Query: 377  DGYAKAGRLDDALNMFSEM 395
             GY+ +G+ + A  ++  M
Sbjct: 1077 RGYSLSGKPEHAYAVYQTM 1095



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 106/219 (48%)

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           T N +L+A+    +++    +   M  + I  +  TY T+    +  G L  A     +M
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM 181

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           +  G  L+  SYN ++ +  K     EA+ V + M   G R    TY++L+ G GK+   
Sbjct: 182 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDI 241

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           + V  + ++M+   + PN+ T++  I V  + G   EA +I +     G   DVV Y+ L
Sbjct: 242 ESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 301

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           IDALC    ++ A  +  +M     +P+ VTY +++D F
Sbjct: 302 IDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRF 340



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 4/218 (1%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
            Y  L+  L   G   +A Q F        R N    + + +I+  G+ G+ D A  +F+ 
Sbjct: 896  YGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPN--CAIYNILINGFGKAGEADAACALFKR 953

Query: 219  ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + EG    +  +S L+      G   E +  F  +K   L P++V YN +I+  GK   
Sbjct: 954  MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFH- 1012

Query: 279  DFKHVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              +  + +F++M ++ G+ PD  T+NSL+      G+ E A  ++NE+   G++ ++FT+
Sbjct: 1013 RLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1072

Query: 338  NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            N L+       + + A+ +   M     SPN  TY  +
Sbjct: 1073 NALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 135/324 (41%), Gaps = 24/324 (7%)

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
           N+     T + M++     G++++   +F  M+   I  D  +Y T+    +  G   +A
Sbjct: 115 NLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQA 174

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
               ++M   G   +A +YN L+    K     E   ++ +M  D   P+L TYS+L+  
Sbjct: 175 PFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVG 234

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K    +  M + +E +  GLK +V  ++  I  L + G +  A  +L  M  EG  P+
Sbjct: 235 LGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPD 294

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           VVTY  +IDA   +   +C   +V   +   +   +     +  D+       +DN+ + 
Sbjct: 295 VVTYTVLIDALCTARKLDCA-KEVFAKMKTGRHKPDRVTYITLLDR------FSDNRDLD 347

Query: 604 VFGQLVAEKAGQGKKENRCRQEI----LCILGVFQK-------MHKLKIKPNVVTFSAIL 652
              Q  +E    G   +     I    LC  G F +       M    I PN+ T++ ++
Sbjct: 348 SVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLI 407

Query: 653 NACSRCNSFEDASMLLEELRLFDN 676
               R +  +DA      L +FDN
Sbjct: 408 CGLLRVHRLDDA------LEIFDN 425


>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
 gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
          Length = 558

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 188/353 (53%), Gaps = 4/353 (1%)

Query: 207 GKVDLAKNIFE-TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           G +  A ++F    + E Y      +  +I  + R     +A  +F  M+ +  KP+  T
Sbjct: 131 GSLKHAVHVFRWMKIQENYCARNDIYGMMIRLHARHNQVDQARGLFFEMQEWRCKPDTDT 190

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           YN++I A  + G  ++  + I DDM R  + P R T+N+++  C   G W+ A  L  +M
Sbjct: 191 YNSLIHAHARAG-QWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKM 249

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              G+  D+ T+N +L A   GAQ   A      M +  ++P+  T + +I    K    
Sbjct: 250 TENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKVALY 309

Query: 386 DDALNMFSEMKFLGIGL--DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            +A+ +F+ M+        D V+Y +++  Y+  G+ E    V   M + G+R + V+YN
Sbjct: 310 GEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSYN 369

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           ALLG Y   G + E    F+ +K +   P++++Y++L++ Y +  L ++A ++F E ++ 
Sbjct: 370 ALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMRKN 429

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             K + V Y+ALIDA    G+++ A+SLL EM ++GI+P+V++ ++++ A GR
Sbjct: 430 ACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGR 482



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 205/431 (47%), Gaps = 39/431 (9%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           ++  L+RE+   G    A+  F + +K +E    +  +   MI +  R  +VD A+ +F 
Sbjct: 119 NFPLLIREITISGSLKHAVHVFRW-MKIQENYCARNDIYGMMIRLHARHNQVDQARGLFF 177

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                        +++LI A+ R+G  + AI++ + M+R  + P+  TYN VI+ACG  G
Sbjct: 178 EMQEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAG 237

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            ++K  +E+   M  NGV PD IT N +L+    G  +  A   F  M    +  D  T 
Sbjct: 238 -NWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTM 296

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNI--SPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           N ++  + K A    A E+   M  +     P+VVTY++++  Y+  G+ ++   +F  M
Sbjct: 297 NIVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMM 356

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G+  + VSYN +L  YA  G   EAL   K ++ +G + D V+Y +LL  YG+    
Sbjct: 357 VAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALP 416

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           ++ R +F +M+ +   PN ++Y+ LID Y   G+ KEA+ +  E +Q G++ DV+  S L
Sbjct: 417 EKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTL 476

Query: 516 IDAL--CKN---------------------------------GLVESAVSLLDEMTKEGI 540
           + A   C+                                  G  + A+ L   M    +
Sbjct: 477 LTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALELYTSMRTGNV 536

Query: 541 RPNVVTYNSII 551
           +P+ VTYN +I
Sbjct: 537 KPDAVTYNILI 547



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 204/446 (45%), Gaps = 38/446 (8%)

Query: 280 FKHVVEIFDDM-LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            KH V +F  M ++         +  ++ + +R    + AR LF EM       D  TYN
Sbjct: 133 LKHAVHVFRWMKIQENYCARNDIYGMMIRLHARHNQVDQARGLFFEMQEWRCKPDTDTYN 192

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L+ A  +  Q   A  IM +M    I P+  TY+ +I+    AG    AL +  +M   
Sbjct: 193 SLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTEN 252

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+G D +++N VLS +    ++ +A+   + M+SS +  D  T N ++    K   Y E 
Sbjct: 253 GVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKVALYGEA 312

Query: 459 RRMFEQMKA--DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
             +F  M+       P+++TY++++  YS  G  +    +F      G++ ++V Y+AL+
Sbjct: 313 IELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALL 372

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
            A   +G+   A+     + + G +P++V+Y S+++A+GRSA  E           K +E
Sbjct: 373 GAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPE-----------KARE 421

Query: 577 SANLDAMCSQDDKDVQEAGRTD-NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
             N      +  K+  +  +   N +I  +G      AG  K+           + +  +
Sbjct: 422 VFN------EMRKNACKPNKVSYNALIDAYGS-----AGMLKEA----------ISLLHE 460

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNI-- 693
           M +  I+P+V++ S +L AC RC       ++L   +    Q+  VA+   +G   ++  
Sbjct: 461 MEQDGIQPDVISISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSLGD 520

Query: 694 WVQALSLFDEVKLMDSSTASAFYNAL 719
           + +AL L+  ++  +    +  YN L
Sbjct: 521 YKKALELYTSMRTGNVKPDAVTYNIL 546



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 170/375 (45%), Gaps = 17/375 (4%)

Query: 157 DDYTFLLRELGNRGEWSKAI------QCFAFAVKREERKNDQGKLASAMISILGRLGKVD 210
           D Y  L+      G+W  AI      Q  A    R    N        +I+  G  G   
Sbjct: 189 DTYNSLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNN--------VINACGAAGNWK 240

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
            A  + +     G G  +   + ++SA+       +AI+ F  MK   + P+  T N VI
Sbjct: 241 KALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVI 300

Query: 271 DACGKGGVDFKHVVEIFDDML--RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
               K  + +   +E+F+ M   R    PD +T+ S++   S  G  E  + +F+ MV  
Sbjct: 301 HCLVKVAL-YGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAE 359

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G+  +I +YN LL A         A E    +      P++V+Y+++++ Y ++   + A
Sbjct: 360 GVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKA 419

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             +F+EM+      ++VSYN ++  Y   G  +EA+ +  EME  GI+ D ++ + LL  
Sbjct: 420 REVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTA 479

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            G+  +  ++  +    K+  +  N + Y++ I  Y   G YK+A++++   +   +K D
Sbjct: 480 CGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALELYTSMRTGNVKPD 539

Query: 509 VVLYSALIDALCKNG 523
            V Y+ LI   CK G
Sbjct: 540 AVTYNILISGSCKLG 554



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 135/252 (53%), Gaps = 9/252 (3%)

Query: 246 EAISVFNSMK--RYNLKPNLVTYNAVI---DACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
           EAI +FNSM+  R    P++VTY +++     CG+     ++   +FD M+  GV+P+ +
Sbjct: 311 EAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQA----ENCKAVFDMMVAEGVRPNIV 366

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           ++N+LL   +  G+   A   F  +   G   DI +Y +LL+A  + A  + A E+  EM
Sbjct: 367 SYNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEM 426

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
                 PN V+Y+ +ID Y  AG L +A+++  EM+  GI  D +S +T+L+   +  + 
Sbjct: 427 RKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCRQP 486

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
            +  ++    +S GI+ + V YN+ +G Y   G Y +   ++  M+   V P+ +TY+ L
Sbjct: 487 TKIGIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALELYTSMRTGNVKPDAVTYNIL 546

Query: 481 IDVYSKGGLYKE 492
           I    K G +++
Sbjct: 547 ISGSCKLGSFRK 558



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 86/390 (22%), Positives = 167/390 (42%), Gaps = 51/390 (13%)

Query: 403 DRVSYNTVLSIYAKLGRFEEA--LLVCKEMESSGIRKDAV-----------------TYN 443
           D  + + VL+ +A  GRF      L+ +E+  SG  K AV                  Y 
Sbjct: 100 DAHAVDAVLNCWA--GRFARRNFPLLIREITISGSLKHAVHVFRWMKIQENYCARNDIYG 157

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            ++  + +  + D+ R +F +M+     P+  TY++LI  +++ G ++ A+ I  + ++A
Sbjct: 158 MMIRLHARHNQVDQARGLFFEMQEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQRA 217

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
            +      Y+ +I+A    G  + A+ L  +MT+ G+ P+++T+N ++ AF   A     
Sbjct: 218 AIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKA 277

Query: 564 VDDVE----RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI----------IKVFGQLV 609
           +   E      +     + N+   C        EA    N +          +  +  ++
Sbjct: 278 IAYFEIMKSSKVAPDTCTMNIVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIM 337

Query: 610 AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
              +  G+ EN C+        VF  M    ++PN+V+++A+L A +      +A   LE
Sbjct: 338 YSYSVCGQAEN-CK-------AVFDMMVAEGVRPNIVSYNALLGAYASHGMHTEA---LE 386

Query: 670 ELRLFDNQVYG---VAH-GLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLW 724
             +L     +    V++  LL  Y R  +  +A  +F+E++          YNAL D   
Sbjct: 387 TFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYG 446

Query: 725 HFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
             G  + A  ++ E ++  +  +V S S L
Sbjct: 447 SAGMLKEAISLLHEMEQDGIQPDVISISTL 476


>gi|428179078|gb|EKX47950.1| hypothetical protein GUITHDRAFT_136922 [Guillardia theta CCMP2712]
          Length = 714

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 242/494 (48%), Gaps = 48/494 (9%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTV----YAFSALISAYGRSGYCQEAIS 249
           KL S +I  +GR  K  +  ++      E     +      F+A I A  R G  +EA++
Sbjct: 48  KLVSRLIVEIGRKHKKMMVADVLRWMREESERRKIKLSSLPFNACIRALERMGDWREAVA 107

Query: 250 VFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC 309
           + N M++  ++P++V+YN V+ A  +   D ++V  +   M R  V PD ++FN+ LA C
Sbjct: 108 ILNIMEKDGVEPDIVSYNTVLSAL-RHSPDIQNVFVMLKRM-REKVSPDIVSFNTALAAC 165

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
            R   WE+   +   M    I++D+FT++TL+    +  + D AF +  EM AKN+SPN+
Sbjct: 166 QRQCDWESGVAILEMMSEDQIERDVFTFSTLISLCDRCGKYDEAFALKEEMDAKNVSPNI 225

Query: 370 VTYSTMID-----------GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
            T++ +I               +   L  A  +F+E K  G+  D V+YN++L +Y ++G
Sbjct: 226 YTFNALIAVCKNSLATSLMSRKRQNTLTIAQILFAEAKAAGLRPDIVTYNSLLGVYMEMG 285

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           +++E+  +  E+E   +  D +TY+ L+  + K  KY     M+E+M    V PN++TY+
Sbjct: 286 KWKESYDILFEIEDQHVITDVITYSTLISTFAKTRKYSLAIEMYEKMMERQVMPNVITYN 345

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           +LI    +   + +A   F + +  G+  +VV YS +I +        +A  L  EM ++
Sbjct: 346 SLIFACLRANNFSQAFAFFDDMQAQGISPNVVTYSTMIASCRSKDNWVTAFDLFLEMIRK 405

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
            I P+ +T+++++     S               KQ E A +D +    D  +Q   R  
Sbjct: 406 EIPPDPMTFSALLSVCQHS---------------KQWEQA-MDVLEWMQDAGIQLNIRMY 449

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
           + ++ V GQ        G+ ++  R        +  +  +  IKPNV+ F+A+++AC   
Sbjct: 450 SAVVHVCGQ-------AGRLDDAFR--------ILDECKRDGIKPNVIMFTALIHACKVA 494

Query: 659 NSFEDASMLLEELR 672
              + A  +LE ++
Sbjct: 495 RDLDRAFRVLELMK 508



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 178/348 (51%), Gaps = 12/348 (3%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC- 273
           I E    +     V+ FS LIS   R G   EA ++   M   N+ PN+ T+NA+I  C 
Sbjct: 177 ILEMMSEDQIERDVFTFSTLISLCDRCGKYDEAFALKEEMDAKNVSPNIYTFNALIAVCK 236

Query: 274 --------GKGGVDFKHVVEI-FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
                    +   +   + +I F +    G++PD +T+NSLL V    G W+ + ++  E
Sbjct: 237 NSLATSLMSRKRQNTLTIAQILFAEAKAAGLRPDIVTYNSLLGVYMEMGKWKESYDILFE 296

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           +  + +  D+ TY+TL+    K  +  LA E+  +M  + + PNV+TY+++I    +A  
Sbjct: 297 IEDQHVITDVITYSTLISTFAKTRKYSLAIEMYEKMMERQVMPNVITYNSLIFACLRANN 356

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
              A   F +M+  GI  + V+Y+T+++       +  A  +  EM    I  D +T++A
Sbjct: 357 FSQAFAFFDDMQAQGISPNVVTYSTMIASCRSKDNWVTAFDLFLEMIRKEIPPDPMTFSA 416

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           LL       ++++   + E M+   +  N+  YS ++ V  + G   +A +I  E K+ G
Sbjct: 417 LLSVCQHSKQWEQAMDVLEWMQDAGIQLNIRMYSAVVHVCGQAGRLDDAFRILDECKRDG 476

Query: 505 LKADVVLYSALIDALCKNGL-VESAVSLLDEMTKEGIRPNVVTYNSII 551
           +K +V++++ALI A CK    ++ A  +L+ M ++ + PN+VT+N ++
Sbjct: 477 IKPNVIMFTALIHA-CKVARDLDRAFRVLELMKEDHVTPNLVTFNVLL 523



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 196/399 (49%), Gaps = 11/399 (2%)

Query: 154 CGADDYTFLLRELGNRGEWSKAIQCF--AFAVKREERKNDQGKLASAMISILGRLGKVDL 211
           CG  D  F L+E  +    S  I  F    AV +         LA++++S   R   + +
Sbjct: 203 CGKYDEAFALKEEMDAKNVSPNIYTFNALIAVCK-------NSLATSLMS-RKRQNTLTI 254

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ +F  A   G    +  +++L+  Y   G  +E+  +   ++  ++  +++TY+ +I 
Sbjct: 255 AQILFAEAKAAGLRPDIVTYNSLLGVYMEMGKWKESYDILFEIEDQHVITDVITYSTLIS 314

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              K    +   +E+++ M+   V P+ IT+NSL+  C R   +  A   F++M  +GI 
Sbjct: 315 TFAKTR-KYSLAIEMYEKMMERQVMPNVITYNSLIFACLRANNFSQAFAFFDDMQAQGIS 373

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            ++ TY+T++ +         AF++  EM  K I P+ +T+S ++     + + + A+++
Sbjct: 374 PNVVTYSTMIASCRSKDNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQHSKQWEQAMDV 433

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
              M+  GI L+   Y+ V+ +  + GR ++A  +  E +  GI+ + + + AL+     
Sbjct: 434 LEWMQDAGIQLNIRMYSAVVHVCGQAGRLDDAFRILDECKRDGIKPNVIMFTALIHACKV 493

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
               D   R+ E MK D V+PNL+T++ L+      G    A Q+    ++ G +A++  
Sbjct: 494 ARDLDRAFRVLELMKEDHVTPNLVTFNVLLGTCEVVGNSTCAFQVVGLLQEYGFRANLQT 553

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           ++ LI    ++   + A  +  +M  + IRP++ T+N++
Sbjct: 554 FNTLIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFNAL 592



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/401 (23%), Positives = 182/401 (45%), Gaps = 45/401 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +IS   +  K  LA  ++E  +       V  +++LI A  R+    +A + F+ M+ 
Sbjct: 310 STLISTFAKTRKYSLAIEMYEKMMERQVMPNVITYNSLIFACLRANNFSQAFAFFDDMQA 369

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN+VTY+ +I +C +   ++    ++F +M+R  + PD +TF++LL+VC     WE
Sbjct: 370 QGISPNVVTYSTMIASC-RSKDNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQHSKQWE 428

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A ++   M   GI  +I  Y+ ++    +  ++D AF I+ E     I PNV+ ++ +I
Sbjct: 429 QAMDVLEWMQDAGIQLNIRMYSAVVHVCGQAGRLDDAFRILDECKRDGIKPNVIMFTALI 488

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
                A  LD A  +   MK   +  + V++N +L     +G    A  V   ++  G R
Sbjct: 489 HACKVARDLDRAFRVLELMKEDHVTPNLVTFNVLLGTCEVVGNSTCAFQVVGLLQEYGFR 548

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT-------------------- 476
            +  T+N L+    +  ++ +   ++ QM+   + P+L T                    
Sbjct: 549 ANLQTFNTLIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFNALSMAAEEGGDWRRAIDV 608

Query: 477 ------------------------YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
                                   Y++LI    K   Y++A  +++  K +G++A++V Y
Sbjct: 609 MVDMRIKTEKILIRMAGHTPSVQAYNSLISACVKSSNYQKAFDVYKGMKTSGVRANIVTY 668

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           + +I  L     +   + +++EM +E + P+  T   +IDA
Sbjct: 669 NLIISILSGQRKLSEVLKVINEMKQEEVTPDSETIALMIDA 709



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 163/336 (48%), Gaps = 18/336 (5%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ ++    ++  W  A   F   +++E   +      SA++S+     + + A ++ E 
Sbjct: 379 YSTMIASCRSKDNWVTAFDLFLEMIRKEIPPDPMT--FSALLSVCQHSKQWEQAMDVLEW 436

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + G    +  +SA++   G++G   +A  + +  KR  +KPN++ + A+I AC K   
Sbjct: 437 MQDAGIQLNIRMYSAVVHVCGQAGRLDDAFRILDECKRDGIKPNVIMFTALIHAC-KVAR 495

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           D      + + M  + V P+ +TFN LL  C   G    A  +   +   G   ++ T+N
Sbjct: 496 DLDRAFRVLELMKEDHVTPNLVTFNVLLGTCEVVGNSTCAFQVVGLLQEYGFRANLQTFN 555

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+    +  +   AFE+ ++M  + I P++ T++ +     + G    A+++  +M+  
Sbjct: 556 TLIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFNALSMAAEEGGDWRRAIDVMVDMR-- 613

Query: 399 GIGLDRV------------SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            I  +++            +YN+++S   K   +++A  V K M++SG+R + VTYN ++
Sbjct: 614 -IKTEKILIRMAGHTPSVQAYNSLISACVKSSNYQKAFDVYKGMKTSGVRANIVTYNLII 672

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
                Q K  EV ++  +MK + V+P+  T + +ID
Sbjct: 673 SILSGQRKLSEVLKVINEMKQEEVTPDSETIALMID 708



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/305 (20%), Positives = 129/305 (42%), Gaps = 50/305 (16%)

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E ++  +K   + ++A I AL + G    AV++L+ M K+G+ P++V+YN+++ A   S 
Sbjct: 76  ESERRKIKLSSLPFNACIRALERMGDWREAVAILNIMEKDGVEPDIVSYNTVLSALRHSP 135

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
                + +V   L + +E                          KV   +V+        
Sbjct: 136 D----IQNVFVMLKRMRE--------------------------KVSPDIVSFNTALAAC 165

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL--RLFDN 676
           + +C  E    + + + M + +I+ +V TFS +++ C RC  +++A  L EE+  +    
Sbjct: 166 QRQCDWE--SGVAILEMMSEDQIERDVFTFSTLISLCDRCGKYDEAFALKEEMDAKNVSP 223

Query: 677 QVY-----------GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWH 725
            +Y            +A  L+   R N    A  LF E K          YN+L  +   
Sbjct: 224 NIYTFNALIAVCKNSLATSLMSRKRQNTLTIAQILFAEAKAAGLRPDIVTYNSLLGVYME 283

Query: 726 FGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHEL 785
            G+ + +  ++ E + + V  +V + S L      S  A+   ++  + ++  + E   +
Sbjct: 284 MGKWKESYDILFEIEDQHVITDVITYSTL-----ISTFAKTRKYSLAIEMYEKMMERQVM 338

Query: 786 PKLLS 790
           P +++
Sbjct: 339 PNVIT 343


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 192/365 (52%), Gaps = 8/365 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-- 254
           +++I  L +  + D A+ +FE   +     ++  ++ L+    R+G  + A+++F  M  
Sbjct: 118 NSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLD 177

Query: 255 -KRYNL----KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC 309
            + +++     PN++TY+ +ID   K        VE+ + M   G  PD IT+  L+   
Sbjct: 178 RRSHDMDDRCSPNVITYSVLIDGLCKAN-RVSQAVELLESMKARGCSPDVITYTILVDGL 236

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
            +     AA  +  EM+  G   ++ TYN+LL  +C+  ++  A  +M +M  +  +PNV
Sbjct: 237 CKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNV 296

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           VTY T+IDG  K GR+ DA  M ++M   G   D + YN +++   K  + +E++ + + 
Sbjct: 297 VTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRR 356

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
             S GI+ D VTY++++ G  +  + DE  R+   +K+    P+++ YSTLID   K G 
Sbjct: 357 AVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGK 416

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
             EA  ++      G  ADVV YS LID LCK G V+ A  LL  M + G  P+ +TYNS
Sbjct: 417 VDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNS 476

Query: 550 IIDAF 554
           +I   
Sbjct: 477 LIKGL 481



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 143/542 (26%), Positives = 249/542 (45%), Gaps = 34/542 (6%)

Query: 151 FKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGK 208
             +C  D YT+  LLR     GE  +A +CF     R +       L S +I  L +  +
Sbjct: 2   LPICQPDVYTYAALLRGFCRGGEIDQAQRCFDEM--RSKNLVPNVFLCSILIDGLCKAKR 59

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
              A   F      G       ++AL+S   +     +A+++ + M+ +  +PN+VTYN+
Sbjct: 60  SIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNS 119

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV-H 327
           +ID   K   +     E+F+ M      P  +T+N+LL    R G  E A  LF EM+  
Sbjct: 120 LIDGLCKNN-EPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDR 178

Query: 328 RGIDQD------IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           R  D D      + TY+ L+D +CK  ++  A E++  M A+  SP+V+TY+ ++DG  K
Sbjct: 179 RSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCK 238

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
             ++  A  +  EM   G   + V+YN++L    +  R  +AL + ++M   G   + VT
Sbjct: 239 ESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVT 298

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  L+ G  K G+  +   M   M     +P+L+ Y+ LI+   K     E++ + R   
Sbjct: 299 YGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAV 358

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G+K DVV YS++I  LC++  ++ A  LL  +   G  P+V+ Y+++ID   ++   +
Sbjct: 359 SGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVD 418

Query: 562 CTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
              D  E   G   +      S  +D +C        +AGR D   + +  ++V      
Sbjct: 419 EAFDLYEVMAGDGCDADVVTYSTLIDGLC--------KAGRVDEAHL-LLARMVRMGTPP 469

Query: 616 GKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
                    + LC L        + ++M +    P+ VT++ +++   R    + A +LL
Sbjct: 470 STMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLL 529

Query: 669 EE 670
           E+
Sbjct: 530 EQ 531


>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
 gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
          Length = 1443

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 216/416 (51%), Gaps = 8/416 (1%)

Query: 157 DDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF 216
           D+  F++R +G    W +A+  F +  +         +  + ++ +LGR  +  +A+ +F
Sbjct: 156 DEVAFVVRAVGE-SSWRRALDAFEWLARS---TAPASRAVAVVLGVLGRARQDSIAEEVF 211

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
                EG   TV  F+A++  Y RSG   +A  + ++M    + P+LV++N +I+A  K 
Sbjct: 212 LRFAGEG--ATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKS 269

Query: 277 GVDFKHV-VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G     V +++  ++ ++G++PD IT+N+L++ CS+    E A  +F EM+      D++
Sbjct: 270 GCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLW 329

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYN ++    +  + + A  +  E+  K   P+ VTY++++  +AK G +D   +   E+
Sbjct: 330 TYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEEL 389

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G   + ++YNT++ +Y K+GR + A+ +  EM + G   DAVTY  ++   GK  K 
Sbjct: 390 VKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKI 449

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            E  ++ E M    + P L+ +S LI  Y+KGG   +A + F     +G+K D + Y  +
Sbjct: 450 AEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVM 509

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           +D   ++G  E  + L   M  +  RP+   Y  ++ A  +    E  ++++ +D+
Sbjct: 510 LDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCE-EIEEIIQDM 564



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 149/652 (22%), Positives = 293/652 (44%), Gaps = 50/652 (7%)

Query: 231  FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
            + ++IS Y + G+ + A  + +   +  +  N+++   +I     G +      EI    
Sbjct: 713  YESIISTYCKLGFPETAHGLMDDALQSGIPLNILSCRVIIIE-AYGNIKLWQQAEILVKG 771

Query: 291  LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
            LR     DR  +N+L+   +  GL+E AR +F+ M+  G    + + N ++ A+    ++
Sbjct: 772  LRQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRL 831

Query: 351  DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
            D  + ++ E+   +   +  T   M+D +AKAG + + + +++ MK  G   +   Y ++
Sbjct: 832  DELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSM 891

Query: 411  LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
             S+     RF +  L+  EME +G + D   +N+LL  Y   G +D   ++++ +    +
Sbjct: 892  TSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGL 951

Query: 471  SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
             P+  TY+TLI +Y +    +E   +  E  + GL   +  Y +L+ A  K  L E A  
Sbjct: 952  EPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQ 1011

Query: 531  LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
            L +EM  +  + N   Y+ ++  +              R+ G   ++ NL A+  +D   
Sbjct: 1012 LFEEMRSKSYQLNRSIYHMMMKIY--------------RNAGNHSKAENLLAVMKED--G 1055

Query: 591  VQEAGRTDNQIIKVFGQL----VAEKAGQGKKENRCRQEILCILGVF------------- 633
            ++    T + ++  +G       AE      K +      L    VF             
Sbjct: 1056 IEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAYLKNGDYDLGI 1115

Query: 634  QKMHKLK---IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYR 690
            +K+ ++K   ++P+   ++  + A S C    DA +LL+ L+   +  + +   LL    
Sbjct: 1116 KKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQ---DCGFDLPIRLLTERT 1172

Query: 691  DNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVW-ENVW 749
             ++  +  +  +E++ ++ S A  F NA+ D+LW F  +  A  +      R ++ +NV+
Sbjct: 1173 PSLLSEIANYLEELEALEDSAALNFVNAVEDLLWAFECRATASRIFQLAVERSIYRDNVF 1232

Query: 750  ----SESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGH-ELPKLLSILTGWGKHSKVVGD 804
                 +   D   +S+GAA   +  WL ++     +G  E PK + ++TG G+++ V   
Sbjct: 1233 RVAQKDWGADFRKLSAGAALVGLTLWLDHMQDASLQGSPESPKSVVLVTGEGEYNMV--- 1289

Query: 805  GALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHD 856
             +LR+ +   L  MG+PF       GRF+     +  WL++S     L L D
Sbjct: 1290 -SLRKTIRAYLLEMGSPFLPCRARSGRFVVKAYSLKMWLKDSPFCMDLELKD 1340



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 168/332 (50%), Gaps = 5/332 (1%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    V  ++ LISA  +S   ++A++VF  M     +P+L TYNA++   G+ G   + 
Sbjct: 288 GLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCG-KAEE 346

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
              +F +++  G  PD +T+NSLL   ++ G  +   +   E+V  G  ++  TYNT++ 
Sbjct: 347 AERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIH 406

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
              K  ++DLA  +  EM A   +P+ VTY+ MID   K  ++ +A  +  +M   G+  
Sbjct: 407 MYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKP 466

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
             V+++ ++  YAK GR  +A      M +SG++ D + Y  +L  + + G+ +++ R++
Sbjct: 467 TLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLY 526

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
             M  D   P+   Y  L+   +K    +E  +I ++ +     +  V+ + LI A C  
Sbjct: 527 RTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMELLCQMSLGVISTILIKARC-- 584

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             V     LL +   +G +P+  +  SI++A+
Sbjct: 585 --VSQGGKLLKKACLQGYKPDAKSLWSIMNAY 614



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/374 (22%), Positives = 165/374 (44%), Gaps = 4/374 (1%)

Query: 194  KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
            ++ +A+I      G  + A+ +F+  +  G   TV + + ++ A    G   E   V   
Sbjct: 781  RIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGE 840

Query: 254  MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            ++  + K +  T   ++DA  K G D   V++I++ M   G  P+   + S+ ++     
Sbjct: 841  LQDMDFKISKSTVLLMLDAFAKAG-DVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHN 899

Query: 314  LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             +     +  EM   G   D+  +N+LL+        D   ++   +    + P+  TY+
Sbjct: 900  RFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYN 959

Query: 374  TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            T+I  Y ++ R ++   + +EM   G+     SY ++L+  AK    E+A  + +EM S 
Sbjct: 960  TLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSK 1019

Query: 434  GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
              + +   Y+ ++  Y   G + +   +   MK D + P + T   L+  Y   G   EA
Sbjct: 1020 SYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEA 1079

Query: 494  MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
              +    K + L+   + YS + DA  KNG  +  +  L EM ++G+ P+   +   I A
Sbjct: 1080 ENVLNSLKSSSLEVSTLPYSTVFDAYLKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRA 1139

Query: 554  FGRSATTECTVDDV 567
               ++  E T D +
Sbjct: 1140 ---ASLCEQTADAI 1150



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/585 (19%), Positives = 237/585 (40%), Gaps = 84/585 (14%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++    + G VD  ++  E  +  G+      ++ +I  YG+ G    A+ +++ M+ 
Sbjct: 367 NSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRA 426

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+ VTY  +ID+ GK         ++ +DM   G++P  + F++L+   ++GG   
Sbjct: 427 VGCTPDAVTYTVMIDSLGKMD-KIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRA 485

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A   F+ M+  G+  D   Y  +LD   +  + +    +   M   N  P+   Y  ++
Sbjct: 486 DAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLL 545

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
              AK  + ++   +  +M+ L     ++S   + +I  K     +   + K+    G +
Sbjct: 546 VALAKEDKCEEIEEIIQDMELLC----QMSLGVISTILIKARCVSQGGKLLKKACLQGYK 601

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMK------ADCVSP------------------ 472
            DA +  +++  Y    K++E   + E ++       D +S                   
Sbjct: 602 PDAKSLWSIMNAYVMTEKHEEGLSLLECIRDHVSSSQDLISECSIILLCRKQTSISAYEQ 661

Query: 473 ------------NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
                       N   Y  LI    +  L+ EA Q+F + +  G++A   +Y ++I   C
Sbjct: 662 YSQRLMLKYPGQNCNLYEHLITCLVEAELFSEACQVFCDMQFIGIEASKNIYESIISTYC 721

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNS-IIDAFGRSATTECTVDDVERDLGKQKESAN 579
           K G  E+A  L+D+  + GI  N+++    II+A+G               L +Q E   
Sbjct: 722 KLGFPETAHGLMDDALQSGIPLNILSCRVIIIEAYGNI------------KLWQQAEILV 769

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
                    K +++A   D +I        AE     K              VF  M K 
Sbjct: 770 ---------KGLRQASGIDRRIWNALIHAYAESGLYEKAR-----------AVFDNMIKT 809

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALS 699
              P V + + ++ A       ++  +++ EL+  D ++      L++    + + +A  
Sbjct: 810 GPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDMDFKISKSTVLLML----DAFAKAGD 865

Query: 700 LFDEVKLMDSSTASAF------YNALTDMLWHFGQKRGAQLVVLE 738
           +F+ +K+ +   A+ +      Y ++T +L H  + R  +L++ E
Sbjct: 866 VFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAE 910



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 138/315 (43%), Gaps = 1/315 (0%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            M+    + G V     I+      GY   ++ + ++ S        ++   +   M+   
Sbjct: 856  MLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAG 915

Query: 259  LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             KP+L  +N++++     G +F    +++  +L  G++PD  T+N+L+ +  R    E  
Sbjct: 916  FKPDLSIFNSLLNMYTAAG-NFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEG 974

Query: 319  RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
              L NEM  RG+   + +Y +LL A  K    + A ++  EM +K+   N   Y  M+  
Sbjct: 975  FTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKI 1034

Query: 379  YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
            Y  AG    A N+ + MK  GI     + + +++ Y   G+  EA  V   ++SS +   
Sbjct: 1035 YRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVS 1094

Query: 439  AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
             + Y+ +   Y K G YD   +   +MK D V P+   ++  I   S      +A+ + +
Sbjct: 1095 TLPYSTVFDAYLKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLK 1154

Query: 499  EFKQAGLKADVVLYS 513
              +  G    + L +
Sbjct: 1155 SLQDCGFDLPIRLLT 1169



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 126/251 (50%), Gaps = 34/251 (13%)

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE--AMQIFR 498
            +NA++G Y + G++D+ R++ + M    + P+L++++TLI+  SK G      A+ +  
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLF 282

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E +Q+GL+ DV+ Y+ LI A  ++  +E AV++ +EM     RP++ TYN+++   GR  
Sbjct: 283 EVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCG 342

Query: 559 TTECTVDDVERDLGKQKE----------SANLDAMCSQDDKDVQE--------AGRTDNQ 600
             E    + ER  G+  E          ++ L A   + + D  E        AG   N+
Sbjct: 343 KAE----EAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNE 398

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           I   +  ++      G+ +          +G++ +M  +   P+ VT++ ++++  + + 
Sbjct: 399 I--TYNTMIHMYGKMGRLD--------LAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDK 448

Query: 661 FEDASMLLEEL 671
             +A  +LE++
Sbjct: 449 IAEAGKVLEDM 459



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 103/530 (19%), Positives = 213/530 (40%), Gaps = 75/530 (14%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI  LG++ K+  A  + E   + G   T+ AFSALI AY + G   +A   F+ M  
Sbjct: 437 TVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIA 496

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +KP+ + Y  ++D   + G + + ++ ++  M+ +  +PD   +  LL   ++    E
Sbjct: 497 SGVKPDRLAYLVMLDVFARSG-ETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCE 555

Query: 317 AARNLFNEM-----VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
               +  +M     +  G+   I     L+ A C    +    +++ +   +   P+  +
Sbjct: 556 EIEEIIQDMELLCQMSLGVISTI-----LIKARC----VSQGGKLLKKACLQGYKPDAKS 606

Query: 372 YSTMIDGYAKAGRLDDAL--------------NMFSEMKFLGIGLDRVS----------- 406
             ++++ Y    + ++ L              ++ SE   + +   + S           
Sbjct: 607 LWSIMNAYVMTEKHEEGLSLLECIRDHVSSSQDLISECSIILLCRKQTSISAYEQYSQRL 666

Query: 407 -----------YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
                      Y  +++   +   F EA  V  +M+  GI      Y +++  Y K G  
Sbjct: 667 MLKYPGQNCNLYEHLITCLVEAELFSEACQVFCDMQFIGIEASKNIYESIISTYCKLGFP 726

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLI-DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
           +    + +      +  N+L+   +I + Y    L+++A  + +  +QA    D  +++A
Sbjct: 727 ETAHGLMDDALQSGIPLNILSCRVIIIEAYGNIKLWQQAEILVKGLRQAS-GIDRRIWNA 785

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTV---DDVE 568
           LI A  ++GL E A ++ D M K G  P V + N ++ A    GR       V    D++
Sbjct: 786 LIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDMD 845

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
             + K      LDA     D           +++K++  + A          R    +LC
Sbjct: 846 FKISKSTVLLMLDAFAKAGDV---------FEVMKIYNGMKAAGYLPNMHLYRSMTSLLC 896

Query: 629 ILGVFQ-------KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               F+       +M     KP++  F+++LN  +   +F+  + + + +
Sbjct: 897 HHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSI 946


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 193/354 (54%), Gaps = 5/354 (1%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           +LG+V  A    +  + +G+      FS  ++   ++G+   A+ V   M +   +P++ 
Sbjct: 278 KLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVY 337

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
           TY+ VI+  C  G  + +    I + M+ +G  PD  TFN+L+ A+C+   L EA  +L 
Sbjct: 338 TYSTVINCLCNNG--ELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEAL-DLA 394

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            E+  +G+  +++T+N L++A+CK     LA  +  EM +   +P+ VTY+ +ID    +
Sbjct: 395 RELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSS 454

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G+L  AL++  EM+  G     V+YNT++    K  R EEA  V  +M+ +GI ++A+T+
Sbjct: 455 GKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITF 514

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           N L+ G     + D+   + +QM ++ + PN +TY++++  Y K G   +A  I +    
Sbjct: 515 NTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTA 574

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            G + DVV Y+ LI+ LCK    ++A+ LL  M  +G++P    YN +I +  R
Sbjct: 575 NGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFR 628



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 177/340 (52%), Gaps = 3/340 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G   T    + LI+ Y + G   +A+           +P+ VT++  ++  C  G VD  
Sbjct: 261 GCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVD-- 318

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
           H +++   ML+ G +PD  T+++++      G  E A+ + N+MV  G   D  T+NTL+
Sbjct: 319 HALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLI 378

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
            A+C   Q++ A ++  E+  K +SPNV T++ +I+   K G    A+ +F EMK  G  
Sbjct: 379 VALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCT 438

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D V+YN ++      G+  +AL + KEME SG  +  VTYN ++ G  K+ + +E   +
Sbjct: 439 PDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEV 498

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F+QM    +  N +T++TLID         +A ++  +    GL+ + V Y++++   CK
Sbjct: 499 FDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCK 558

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            G +  A  +L  MT  G   +VVTY ++I+   ++  T+
Sbjct: 559 QGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQ 598



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 179/360 (49%), Gaps = 4/360 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+ L   G+++ AK I    ++ G       F+ LI A       +EA+ +   +  
Sbjct: 340 STVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTV 399

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             L PN+ T+N +I+A  K G D    V +F++M  +G  PD +T+N L+  +CS G L 
Sbjct: 400 KGLSPNVYTFNILINALCKVG-DPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLA 458

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +A  +L  EM   G  Q   TYNT++D +CK  +++ A E+  +M    I  N +T++T+
Sbjct: 459 KAL-DLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTL 517

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG   A R+DDA  +  +M   G+  + V+YN++L+ Y K G   +A  + + M ++G 
Sbjct: 518 IDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGF 577

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VTY  L+ G  K  +     ++   M+   + P    Y+ +I    +G   ++A+ 
Sbjct: 578 EVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALS 637

Query: 496 IFREFKQAGLKADVVLYSALIDALCK-NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +FRE  + G   D   Y  +   LC+  G ++ A   L EM   G  P   ++  + +  
Sbjct: 638 LFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGL 697



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 184/362 (50%), Gaps = 5/362 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S  ++ L + G VD A  +    L EG    VY +S +I+    +G  +EA  + N M  
Sbjct: 305 STFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVD 364

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
               P+  T+N +I A C +     +  +++  ++   G+ P+  TFN L+ A+C  G  
Sbjct: 365 SGCLPDTTTFNTLIVALCTEN--QLEEALDLARELTVKGLSPNVYTFNILINALCKVGDP 422

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             A R LF EM   G   D  TYN L+D +C   ++  A +++ EM       + VTY+T
Sbjct: 423 HLAVR-LFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNT 481

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDG  K  R+++A  +F +M   GIG + +++NT++       R ++A  +  +M S G
Sbjct: 482 IIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEG 541

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++ + VTYN++L  Y KQG   +   + + M A+    +++TY+TLI+   K    + A+
Sbjct: 542 LQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAAL 601

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++ R  +  G+K     Y+ +I +L +      A+SL  EMT+ G  P+  TY  +    
Sbjct: 602 KLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGL 661

Query: 555 GR 556
            R
Sbjct: 662 CR 663



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 149/612 (24%), Positives = 260/612 (42%), Gaps = 69/612 (11%)

Query: 148 KFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLG 207
           +F+ K     +   L+  L  + +   A++    A+ R++       +   +I  LG  G
Sbjct: 45  RFQLKFAAGSEQERLVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAG 104

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKRYNLKPNLVTY 266
             DL K +      EG+   +    + I +Y R     +A   V N +  + ++ N   Y
Sbjct: 105 AFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVY 164

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N ++    +G    K +   + +M   G++PD +TFN+++    R      A  +  EM 
Sbjct: 165 NHLLTVLAEGS-KIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMS 223

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
              +  D  T+ TL++   +   ++ A  + A M     SP  VT + +I+GY K GR+ 
Sbjct: 224 SCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVG 283

Query: 387 DALNMFSE-----------------------------MKFLGIGL------DRVSYNTVL 411
           DAL    +                             +K LG+ L      D  +Y+TV+
Sbjct: 284 DALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVI 343

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           +     G  EEA  +  +M  SG   D  T+N L+     + + +E   +  ++    +S
Sbjct: 344 NCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLS 403

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           PN+ T++ LI+   K G    A+++F E K +G   D V Y+ LID LC +G +  A+ L
Sbjct: 404 PNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDL 463

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFG---RSATTECTVDDVE-RDLGKQKESAN--LDAMCS 585
           L EM   G   + VTYN+IID      R    E   D ++   +G+   + N  +D +C+
Sbjct: 464 LKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCN 523

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR----------CRQ-EILCILGVFQ 634
                   A R D+       +LV +   +G + N           C+Q  I     + Q
Sbjct: 524 --------AERIDDA-----AELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQ 570

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDN 692
            M     + +VVT++ ++N   +    + A  LL  +R+   +    A+  ++   +R N
Sbjct: 571 TMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGN 630

Query: 693 IWVQALSLFDEV 704
               ALSLF E+
Sbjct: 631 NGRDALSLFREM 642



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 93/437 (21%), Positives = 184/437 (42%), Gaps = 65/437 (14%)

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
           +G+ P R  +  ++      G ++  + L  EM   G +  +    + + +  +    D 
Sbjct: 84  DGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDD 143

Query: 353 AFEIMA-EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
           AF++++ ++    +  N   Y+ ++   A+  ++    + ++EM   GI  D V++NTV+
Sbjct: 144 AFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVI 203

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
               +  +   A+L+ +EM S  +  D  T+  L+ G+ ++G  +   R+  +M     S
Sbjct: 204 DALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCS 263

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P  +T + LI+ Y K G   +A+   ++    G + D V +S  ++ LC+NG V+ A+ +
Sbjct: 264 PTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKV 323

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
           L  M +EG  P+V TY+++I+         C  ++ E +  K   +  +D+ C  D    
Sbjct: 324 LGLMLQEGCEPDVYTYSTVIN---------CLCNNGELEEAKGIVNQMVDSGCLPD---- 370

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
                        F  L+     + + E          L + +++    + PNV TF+ +
Sbjct: 371 ----------TTTFNTLIVALCTENQLEE--------ALDLARELTVKGLSPNVYTFNIL 412

Query: 652 LNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSST 711
           +NA  +                      G  H             A+ LF+E+K    + 
Sbjct: 413 INALCK---------------------VGDPH------------LAVRLFEEMKSSGCTP 439

Query: 712 ASAFYNALTDMLWHFGQ 728
               YN L D L   G+
Sbjct: 440 DEVTYNILIDNLCSSGK 456


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 211/422 (50%), Gaps = 14/422 (3%)

Query: 148 KFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLG 207
           +    LC    +  +LR L + G+ ++A++      ++  R N      + +I+     G
Sbjct: 34  RLRLPLC-TTTFNIMLRHLCSAGKPARALELL----RQMPRPN--AVTYNTVIAGFCSRG 86

Query: 208 KVDLAKNIF-ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVT 265
           +V  A +I  E     G     Y +  +IS + + G   EA+ VF+ M  +  +KP  V 
Sbjct: 87  RVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 146

Query: 266 YNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           YNA+I   C +G +D   +    D M+  GV     T+N L+      G    A  L  E
Sbjct: 147 YNALIGGYCDQGKLDTALLYR--DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 204

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M  +G+  D+FTYN L++  CK   +  A EI   M  + +   VVTY+++I   +K G+
Sbjct: 205 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQ 264

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           + +   +F E    GI  D V YN +++ ++  G  + A  +  EME   I  D VTYN 
Sbjct: 265 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 324

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G    G+ DE R++ ++M    + P+L+TY+TLI  YS  G  K+A++I  E    G
Sbjct: 325 LMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 384

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
               ++ Y+ALI  LCKNG  + A +++ EM + GI P+  TY S+I+  G +   E  +
Sbjct: 385 FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE--GLTTEDERAI 442

Query: 565 DD 566
           DD
Sbjct: 443 DD 444



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 184/395 (46%), Gaps = 86/395 (21%)

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           LF +M    +     T+N +L  +C   +   A E++ +MP     PN VTY+T+I G+ 
Sbjct: 28  LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFC 83

Query: 381 KAGRLDDALNMFSEMKFL-GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG-IRKD 438
             GR+  AL++  EM+   GI  ++ +Y TV+S + K+GR +EA+ V  EM + G ++ +
Sbjct: 84  SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 143

Query: 439 AVTYNALLGGYGKQGKYD-----------------------------------EVRRMFE 463
           AV YNAL+GGY  QGK D                                   E   + E
Sbjct: 144 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 203

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M    ++P++ TY+ LI+ + K G  K+A++IF    + G++A VV Y++LI AL K G
Sbjct: 204 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKG 263

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
            V+    L DE  + GIRP++V YN++I++                       S N+D  
Sbjct: 264 QVQETDKLFDEAVRRGIRPDLVLYNALINS--------------------HSTSGNID-- 301

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKM 636
                           +  ++ G++  ++              LC+LG       +  +M
Sbjct: 302 ----------------RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 345

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            K  I+P++VT++ +++  S     +DA  +  E+
Sbjct: 346 TKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 380


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 202/380 (53%), Gaps = 14/380 (3%)

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH---VVEIFDDM 290
           ++SA    G   E + +   +  +  +P++V+YNAV+    KG    K    V E+  +M
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL----KGLCMAKRWDDVEELMVEM 239

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           +R G  P+  TFN+L+A   R GL+E      ++M   G   D+  Y T++D ICK    
Sbjct: 240 VRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHH 299

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           ++A +I++ MP+  + PNVV Y+T++ G   A R ++A ++ +EM      LD V++N +
Sbjct: 300 EVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNIL 359

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +  + + G  +  + + ++M   G   D +TY  ++ G+ K+G  DE   + + M A   
Sbjct: 360 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC 419

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            PN ++Y+ ++    +   + +A ++     Q G   + V ++ LI+ +CK GLVE A+ 
Sbjct: 420 KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIE 479

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESANLDAMCSQDD 588
           LL +M   G  P++++Y+++ID  G++  TE  ++  +V  + G    +    +M S   
Sbjct: 480 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 539

Query: 589 KDVQEAGRTDNQIIKVFGQL 608
           ++    GRTD +II++F  +
Sbjct: 540 RE----GRTD-KIIQMFDSI 554



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 179/367 (48%), Gaps = 14/367 (3%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G+L SA+I  L   G+   A    +TA   G    V A++A+I+ Y R+G   +  +   
Sbjct: 45  GRL-SALIRSLCAAGRTADAARALDTA---GDAAGVVAYNAMIAGYCRAG---QVAAARR 97

Query: 253 SMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDM-LRNGVQPDRITFNSLLAVCS 310
                 + PN  TY  ++ + C +G +     + + D+M LR       +    L A C 
Sbjct: 98  LAAAVPVPPNAYTYFPIVRSLCARGLI--ADALTVLDEMPLRGCAATPPMCHVILEAACR 155

Query: 311 RGGLWEAARNLFNEMVH-RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
            GG   A R L  +++H +G   D    N ++ AIC+   +D   E++ ++P+    P++
Sbjct: 156 GGGFRSAVRAL--QVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDI 213

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           V+Y+ ++ G   A R DD   +  EM  +G   +  ++NT+++   + G FE+      +
Sbjct: 214 VSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQ 273

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M   G   D   Y  ++ G  K G ++    +  +M +  + PN++ Y+T++        
Sbjct: 274 MPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAER 333

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
           ++EA  +  E  Q     D V ++ L+D  C+NGLV+  + LL++M + G  P+V+TY +
Sbjct: 334 WEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTT 393

Query: 550 IIDAFGR 556
           +I+ F +
Sbjct: 394 VINGFCK 400



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/343 (20%), Positives = 129/343 (37%), Gaps = 75/343 (21%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +L+ L +   W +A    A   + +   +D     + ++    + G VD    + E 
Sbjct: 321 YNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDD--VTFNILVDFFCQNGLVDRVIELLEQ 378

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL--------------- 263
            L  G    V  ++ +I+ + + G   EA+ +  +M     KPN                
Sbjct: 379 MLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAER 438

Query: 264 --------------------VTYNAVID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
                               VT+N +I+  C KG V+    +E+   ML NG  PD I++
Sbjct: 439 WVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVE--QAIELLKQMLVNGCSPDLISY 496

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           ++++    + G  E A  L N M+++GI                                
Sbjct: 497 STVIDGLGKAGKTEEALELLNVMINKGI-------------------------------- 524

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
              +PN + YS+M    ++ GR D  + MF  ++   +  D   YN V+S   K    + 
Sbjct: 525 ---TPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDR 581

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           A+     M S+G   +  TY  L+ G   +G   E + +  ++
Sbjct: 582 AIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 3/133 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  LG+ GK + A  +    +N+G       +S++ SA  R G   + I +F+S++ 
Sbjct: 497 STVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQD 556

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             ++ +   YNAVI + C +   D    ++ F  M+ NG  P+  T+  L+   +  GL 
Sbjct: 557 ATVRSDAALYNAVISSLCKRWETD--RAIDFFAYMVSNGCMPNESTYTILIRGLASEGLV 614

Query: 316 EAARNLFNEMVHR 328
             A++L +E+  R
Sbjct: 615 REAQDLLSELCSR 627


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 141/553 (25%), Positives = 263/553 (47%), Gaps = 46/553 (8%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V +++ +I+ + + G   +A S ++ M    + P++VTYN++I A C    +D    +E+
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMD--KAMEV 253

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
            + M++NGV PD +T+NS+L   CS G   EA      +M   G++ D+ TY+ L+D +C
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI-GFLKKMRSDGVEPDVVTYSLLMDYLC 312

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  +   A +I   M  + + P + TY T++ GYA  G L +   +   M   GI  D  
Sbjct: 313 KNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHY 372

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            ++ ++  YAK G+ ++A+LV  +M   G+  +AVTY A++G   K G+ ++    FEQM
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             + +SP  + Y++LI        ++ A ++  E    G+  + + ++++ID+ CK G V
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-LDAMC 584
             +  L + M + G++PNV+TYN++I+ +       C         GK  E+   L  M 
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGY-------CLA-------GKMDEAMKLLSGMV 538

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
           S         G   N +   +  L+       + E+         L +F++M    + P+
Sbjct: 539 S--------VGLKPNTV--TYSTLINGYCKISRMEDA--------LVLFKEMESSGVSPD 580

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELRLFDNQV----YGVA-HGLLMGYRDNIWVQALS 699
           ++T++ IL    +      A  L   +     Q+    Y +  HGL    ++ +   AL 
Sbjct: 581 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC---KNKLTDDALQ 637

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLM 759
           +F  + LMD    +  +N + D L   G+   A+ + +      +  N W+   +  +++
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII 697

Query: 760 SSGAARAMVHAWL 772
             G    +   +L
Sbjct: 698 GQGLLEELDQLFL 710



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 194/365 (53%), Gaps = 3/365 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I+ L +   +D A  +  T +  G       +++++  Y  SG  +EAI     M+ 
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             ++P++VTY+ ++D   K G       +IFD M + G++P+  T+ +LL    ++G L 
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNG-RCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E    L + MV  GI  D + ++ L+ A  K  ++D A  + ++M  + ++PN VTY  +
Sbjct: 354 EM-HGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAV 412

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I    K+GR++DA+  F +M   G+    + YN+++       ++E A  +  EM   GI
Sbjct: 413 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 472

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + + +N+++  + K+G+  E  ++FE M    V PN++TY+TLI+ Y   G   EAM+
Sbjct: 473 CLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +       GLK + V YS LI+  CK   +E A+ L  EM   G+ P+++TYN I+    
Sbjct: 533 LLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLF 592

Query: 556 RSATT 560
           ++  T
Sbjct: 593 QTRRT 597



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 182/342 (53%), Gaps = 3/342 (0%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD 279
           ++G    V  +S L+    ++G C EA  +F+SM +  LKP + TY  ++     KG + 
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
             H   + D M+RNG+ PD   F+ L+   ++ G  + A  +F++M  +G++ +  TY  
Sbjct: 354 EMH--GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++  +CK  +++ A     +M  + +SP  + Y+++I G     + + A  +  EM   G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I L+ + +N+++  + K GR  E+  + + M   G++ + +TYN L+ GY   GK DE  
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++   M +  + PN +TYSTLI+ Y K    ++A+ +F+E + +G+  D++ Y+ ++  L
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +     +A  L   +T+ G +  + TYN I+    ++  T+
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 633



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 141/568 (24%), Positives = 259/568 (45%), Gaps = 62/568 (10%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN---LKPNLVTYNA 268
           A+++F+  L  G G ++Y  +  ++   R      A+S +N M R     + P+L TY  
Sbjct: 34  ARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTYGI 92

Query: 269 VIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           +I  C + G +D         ++++ G + D I F  LL  +C+     +A   +   M 
Sbjct: 93  LIGCCCRAGRLDLGFAA--LGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEI---MAEMPAKNISPNVVTYSTMIDGYAKAG 383
             G   ++F+YN LL  +C   +   A E+   MA+       P+VV+Y+T+I+G+ K G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
             D A + + EM   GI  D V+YN++++   K    ++A+ V   M  +G+  D +TYN
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           ++L GY   G+  E     ++M++D V P+++TYS L+D   K G   EA +IF    + 
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 504 GLKADVVLY-----------------------------------SALIDALCKNGLVESA 528
           GLK ++  Y                                   S LI A  K G V+ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN------LDA 582
           + +  +M ++G+ PN VTY ++I    +S   E  +   E+ + +     N      +  
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450

Query: 583 MCSQDDKDVQEAGRTDNQIIKVF--GQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKL 639
           +C+ +  +     R +  I+++   G  +         ++ C++  ++    +F+ M ++
Sbjct: 451 LCTCNKWE-----RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQA 697
            +KPNV+T++ ++N        ++A  LL  +     +   V +  L+ GY + +    A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWH 725
           L LF E++    S     YN +   L+ 
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQ 593



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 186/358 (51%), Gaps = 1/358 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++  L + G+   A+ IF++    G    +  +  L+  Y   G   E   + + M R
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P+   ++ +I A  K G      + +F  M + G+ P+ +T+ +++ +  + G  E
Sbjct: 365 NGIHPDHYVFSILICAYAKQG-KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A   F +M+  G+      YN+L+  +C   + + A E++ EM  + I  N + ++++I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D + K GR+ ++  +F  M  +G+  + ++YNT+++ Y   G+ +EA+ +   M S G++
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + VTY+ L+ GY K  + ++   +F++M++  VSP+++TY+ ++    +      A ++
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +    ++G + ++  Y+ ++  LCKN L + A+ +   +    ++    T+N +IDA 
Sbjct: 604 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 211/492 (42%), Gaps = 89/492 (18%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ---DIF 335
           D +HV   FD++LR G        N  LA  +R     AA + +N M   G D+   D+ 
Sbjct: 33  DARHV---FDELLRRGRGASIYGLNRALADVARDS-PAAAVSRYNRMARAGADEVTPDLC 88

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNIS----------------------------- 366
           TY  L+   C+  ++DL F  +  +  K                                
Sbjct: 89  TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 367 -------PNVVTYSTMIDGYAKAGRLDDA---LNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
                  PNV +Y+ ++ G     R  +A   L+M ++ +  G   D VSY TV++ + K
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
            G  ++A     EM   GI  D VTYN+++    K    D+   +   M  + V P+ +T
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y++++  Y   G  KEA+   ++ +  G++ DVV YS L+D LCKNG    A  + D MT
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
           K G++P + TY +++  +   AT    V+              LD M       V+    
Sbjct: 329 KRGLKPEITTYGTLLQGY---ATKGALVE----------MHGLLDLM-------VRNGIH 368

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
            D+    VF  L+   A QGK +    Q +L    VF KM +  + PN VT+ A++    
Sbjct: 369 PDHY---VFSILICAYAKQGKVD----QAML----VFSKMRQQGLNPNAVTYGAVIGILC 417

Query: 657 RCNSFEDASMLLEELRLFD------NQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDS 709
           +    EDA +  E+  + D      N VY  + HGL      N W +A  L  E+     
Sbjct: 418 KSGRVEDAMLYFEQ--MIDEGLSPGNIVYNSLIHGLCTC---NKWERAEELILEMLDRGI 472

Query: 710 STASAFYNALTD 721
              + F+N++ D
Sbjct: 473 CLNTIFFNSIID 484



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 192/388 (49%), Gaps = 18/388 (4%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           D Y F  L+     +G+  +A+    F+  R++  N       A+I IL + G+V+ A  
Sbjct: 370 DHYVFSILICAYAKQGKVDQAM--LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427

Query: 215 IFETALNEGY--GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
            FE  ++EG   GN VY  ++LI         + A  +   M    +  N + +N++ID+
Sbjct: 428 YFEQMIDEGLSPGNIVY--NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 485

Query: 273 CGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
             K G     V+E   +F+ M+R GV+P+ IT+N+L+      G  + A  L + MV  G
Sbjct: 486 HCKEG----RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  +  TY+TL++  CK ++M+ A  +  EM +  +SP+++TY+ ++ G  +  R   A 
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            ++  +   G  ++  +YN +L    K    ++AL + + +    ++ +A T+N ++   
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            K G+ DE + +F    ++ + PN  TY  + +     GL +E  Q+F   +  G   D 
Sbjct: 662 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDS 721

Query: 510 VLYSALIDALCKNGLVESA---VSLLDE 534
            + + ++  L + G +  A   +S++DE
Sbjct: 722 GMLNFIVRELLQRGEITRAGTYLSMIDE 749



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 2/293 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V  ++ +FE  +  G    V  ++ LI+ Y  +G   EA+ + + M    LKPN VTY
Sbjct: 490 GRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 549

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           + +I+   K     +  + +F +M  +GV PD IT+N +L    +     AA+ L+  + 
Sbjct: 550 STLINGYCKIS-RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G   ++ TYN +L  +CK    D A ++   +   ++     T++ MID   K GR D
Sbjct: 609 ESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRND 668

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A ++F      G+  +  +Y  +       G  EE   +   ME +G   D+   N ++
Sbjct: 669 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
               ++G+          +     S    T S  ID+ S GG Y+E  +   E
Sbjct: 729 RELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLS-GGKYQEYYRFLPE 780


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 242/500 (48%), Gaps = 69/500 (13%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD A ++F   L        + F+ ++ +  +S +    + +   M+   +KPNLV  N 
Sbjct: 66  VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE---------- 316
           +I+  C  G + F     +F  +L+ G  PD ITF +L+  +C +G + +          
Sbjct: 126 LINCFCQLGLIPF--AFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVA 183

Query: 317 ------------------------AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
                                   AA +L   +    +  ++  YNT++D++CK   ++ 
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           AF++ +EM +K ISP+VVTYS +I G+   G+L+DA+++F++M    I  D  ++N +++
Sbjct: 244 AFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVN 303

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
            + K G+ +E   V   M   GI+ + VTYN+L+ GY    + ++ + +F  M    V+P
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           ++ +YS +I+ + K   + EAM +F+E  +  +  DVV YS+LID L K+G +  A+ L+
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQ 592
           D+M   G+ P + TYNSI+DA        C +  V++ +           +    DK +Q
Sbjct: 424 DQMHDRGVPPTIRTYNSILDAL-------CKIHQVDKAIA---------LLTKLKDKGIQ 467

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
               T + +IK   Q        GK E+  +       G+  K H L    NV T++ ++
Sbjct: 468 PNMYTYSILIKGLCQ-------SGKLEDARK----VFEGLLVKGHNL----NVDTYTIMI 512

Query: 653 NACSRCNSFEDASMLLEELR 672
                   F +A  LL ++ 
Sbjct: 513 QGFCVEGLFNEALALLSKME 532



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 195/348 (56%), Gaps = 1/348 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I  + ++  V+ A ++F   +++G    V  +SALIS +   G   +AI +FN M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
              N+KP++ T+N +++A  K G   K    +FD M++ G++P+ +T+NSL+        
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDG-KMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A+++FN M   G++ DI +Y+ +++  CK  + D A  +  EM  KNI P+VVTYS+
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDG +K+GR+  AL +  +M   G+     +YN++L    K+ + ++A+ +  +++  G
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKG 465

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I+ +  TY+ L+ G  + GK ++ R++FE +     + N+ TY+ +I  +   GL+ EA+
Sbjct: 466 IQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEAL 525

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            +  + +  G   D   Y  +I +L K    + A  LL EM   G+RP
Sbjct: 526 ALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 193/366 (52%), Gaps = 1/366 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +I+   +LG +  A ++F   L  GY      F+ LI      G  Q+A    + + 
Sbjct: 123 CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVV 182

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
                 + ++Y  +I    K G + +  +++   +  N VQP+ + +N+++    +  L 
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVG-ETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLV 241

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A +LF+EM+ +GI  D+ TY+ L+   C   +++ A ++  +M  +NI P+V T++ +
Sbjct: 242 NEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNIL 301

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ++ + K G++ +   +F  M   GI  + V+YN+++  Y  +    +A  +   M   G+
Sbjct: 302 VNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV 361

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  +Y+ ++ G+ K  K+DE   +F++M    + P+++TYS+LID  SK G    A+Q
Sbjct: 362 NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQ 421

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +  +    G+   +  Y++++DALCK   V+ A++LL ++  +GI+PN+ TY+ +I    
Sbjct: 422 LVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLC 481

Query: 556 RSATTE 561
           +S   E
Sbjct: 482 QSGKLE 487



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 201/421 (47%), Gaps = 32/421 (7%)

Query: 251 FNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCS 310
           FN +   + K N ++Y++          D    V +F+ +LR    P    FN +L    
Sbjct: 38  FNFIPYSSSKINFISYSST-STTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLV 96

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           +   +     L  +M  RGI  ++   N L++  C+   +  AF + A++      P+ +
Sbjct: 97  KSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTI 156

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           T++T+I G    G++  A     ++  LG   D++SY T++    K+G    AL + + +
Sbjct: 157 TFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           + + ++ + V YN ++    K    +E   +F +M +  +SP+++TYS LI  +   G  
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKL 276

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            +A+ +F +     +K DV  ++ L++A CK+G ++   ++ D M K+GI+PN VTYNS+
Sbjct: 277 NDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSL 336

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
           +D +       C V    +++ K K   N  A     + D+Q      N   K+      
Sbjct: 337 MDGY-------CLV----KEVNKAKSIFNTMAQGGV-NPDIQSYSIMINGFCKI------ 378

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                 KK +         + +F++MH+  I P+VVT+S++++  S+      A  L+++
Sbjct: 379 ------KKFDEA-------MNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 671 L 671
           +
Sbjct: 426 M 426



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 214/458 (46%), Gaps = 29/458 (6%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           ++S+  + +  +    +A+S+FN + R N  P    +N ++ +  K    +  V+ +   
Sbjct: 52  SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSK-HYHTVLYLSQK 110

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G++P+ +  N L+    + GL   A ++F +++  G   D  T+ TL+  +C   Q
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQ 170

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  AF    ++ A     + ++Y T+I G  K G    AL++   +    +  + V YNT
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    K+    EA  +  EM S GI  D VTY+AL+ G+   GK ++   +F +M  + 
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN 290

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + P++ T++ L++ + K G  KE   +F    + G+K + V Y++L+D  C    V  A 
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESANL--DAMCS 585
           S+ + M + G+ P++ +Y+ +I+ F       C +   D   +L K+    N+  D +  
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGF-------CKIKKFDEAMNLFKEMHRKNIIPDVVTY 403

Query: 586 QDDKD-VQEAGRTDNQIIKVFGQLVAEKAGQGKKEN-RCRQEI---LC-------ILGVF 633
               D + ++GR    +     QLV +   +G     R    I   LC        + + 
Sbjct: 404 SSLIDGLSKSGRISYAL-----QLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALL 458

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            K+    I+PN+ T+S ++    +    EDA  + E L
Sbjct: 459 TKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGL 496



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/318 (21%), Positives = 120/318 (37%), Gaps = 71/318 (22%)

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           +P  +   N ++YS+    +     +DDA+++F+ +           +N +L    K   
Sbjct: 41  IPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKH 100

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
           +   L + ++ME  GI+ + V  N L+  + + G       +F ++      P+ +T++T
Sbjct: 101 YHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTT 160

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LI      G  ++A     +    G   D + Y  LI  LCK G   +A+ LL  +    
Sbjct: 161 LIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNL 220

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           ++PNVV YN+II                             D+MC    K V EA     
Sbjct: 221 VQPNVVMYNTII-----------------------------DSMCKV--KLVNEA----- 244

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
                                           +F +M    I P+VVT+SA+++      
Sbjct: 245 ------------------------------FDLFSEMISKGISPDVVTYSALISGFCILG 274

Query: 660 SFEDA-----SMLLEELR 672
              DA      M+LE ++
Sbjct: 275 KLNDAIDLFNKMILENIK 292


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 140/552 (25%), Positives = 263/552 (47%), Gaps = 44/552 (7%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V ++S +I+ + + G   +  S +N M    + PN+VTYN++I A C    VD    +E+
Sbjct: 88  VVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVD--KAMEV 145

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
              M+++GV PD +T+NS++   CS G   EA   L  +M   G++ D+ TYN+L+D +C
Sbjct: 146 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFL-KKMRSDGVEPDVVTYNSLMDYLC 204

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  +   A +I   M  + + P + TY T++ GYA  G L +   +   M   GI  +  
Sbjct: 205 KNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 264

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            ++ ++  YAK  + EEA+LV  +M   G+  +AVTY A++G   K G+ ++    FEQM
Sbjct: 265 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 324

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             + +SP  + Y++LI        ++ A ++  E    G+  + + ++++ID+ CK G V
Sbjct: 325 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 384

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
             +  L D M + G++P+++TY+++ID +  +              GK  E+  L  + S
Sbjct: 385 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLA--------------GKMDEATKL--LAS 428

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
                ++    T + +I  + ++   K                 L +F++M    + P++
Sbjct: 429 MVSVGMKPDCVTYSTLINGYCKISRMKDA---------------LVLFREMESSGVSPDI 473

Query: 646 VTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVYGVA-HGLLMGYRDNIWVQALSL 700
           +T++ IL    +      A  L   +    R  +   Y +  HGL    ++ +   AL +
Sbjct: 474 ITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLC---KNKLTDDALRM 530

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMS 760
           F  + LMD    +  +N + D L   G+   A+ + +      +  N W+   +  +++ 
Sbjct: 531 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 590

Query: 761 SGAARAMVHAWL 772
            G    +   +L
Sbjct: 591 QGLLEELDQLFL 602



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 194/365 (53%), Gaps = 3/365 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I+ L +   VD A  +  T +  G       +++++  +  SG  +EAI     M+ 
Sbjct: 127 NSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRS 186

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             ++P++VTYN+++D   K G       +IFD M + G++P+  T+ +LL    ++G L 
Sbjct: 187 DGVEPDVVTYNSLMDYLCKNG-RCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 245

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E    L + MV  GI  + + ++ L+ A  K  +++ A  + ++M  + ++PN VTY  +
Sbjct: 246 EM-HGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAV 304

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I    K+GR++DA+  F +M   G+    + YN+++       ++E A  +  EM   GI
Sbjct: 305 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 364

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + + +N+++  + K+G+  E  ++F+ M    V P+++TYSTLID Y   G   EA +
Sbjct: 365 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 424

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +       G+K D V YS LI+  CK   ++ A+ L  EM   G+ P+++TYN I+    
Sbjct: 425 LLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLF 484

Query: 556 RSATT 560
           ++  T
Sbjct: 485 QTRRT 489



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 181/342 (52%), Gaps = 3/342 (0%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD 279
           ++G    V  +++L+    ++G C EA  +F+SM +  LKP + TY  ++     KG + 
Sbjct: 186 SDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 245

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
             H   + D M+RNG+ P+   F+ L+   ++    E A  +F++M  +G++ +  TY  
Sbjct: 246 EMH--GLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGA 303

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++  +CK  +++ A     +M  + +SP  + Y+++I G     + + A  +  EM   G
Sbjct: 304 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 363

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I L+ + +N+++  + K GR  E+  +   M   G++ D +TY+ L+ GY   GK DE  
Sbjct: 364 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 423

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++   M +  + P+ +TYSTLI+ Y K    K+A+ +FRE + +G+  D++ Y+ ++  L
Sbjct: 424 KLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGL 483

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +     +A  L   +TK G +  + TYN I+    ++  T+
Sbjct: 484 FQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTD 525



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 165/361 (45%), Gaps = 42/361 (11%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y FS L+ AY +    +EA+ VF+ M++  L PN VTY AVI    K G   +  +  F+
Sbjct: 264 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG-RVEDAMLYFE 322

Query: 289 DMLRNGVQPDRITFNSL---LAVCSRGGLWEAARNLFNEMVHRGI--------------- 330
            M+  G+ P  I +NSL   L  C++   WE A  L  EM+ RGI               
Sbjct: 323 QMIDEGLSPGNIVYNSLIHGLCTCNK---WERAEELILEMLDRGICLNTIFFNSIIDSHC 379

Query: 331 --------------------DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
                                 DI TY+TL+D  C   +MD A +++A M +  + P+ V
Sbjct: 380 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 439

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TYST+I+GY K  R+ DAL +F EM+  G+  D ++YN +L    +  R   A  +   +
Sbjct: 440 TYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 499

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
             SG + +  TYN +L G  K    D+  RMF+ +    +     T++ +ID   K G  
Sbjct: 500 TKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 559

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            EA  +F  F   GL  +   Y  + + +   GL+E    L   M   G   +    N I
Sbjct: 560 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 619

Query: 551 I 551
           +
Sbjct: 620 V 620



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 183/358 (51%), Gaps = 1/358 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++  L + G+   A+ IF++    G    +  +  L+  Y   G   E   + + M R
Sbjct: 197 NSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 256

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN   ++ ++ A  K     +  + +F  M + G+ P+ +T+ +++ +  + G  E
Sbjct: 257 NGIHPNHYVFSILVCAYAKQE-KVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 315

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A   F +M+  G+      YN+L+  +C   + + A E++ EM  + I  N + ++++I
Sbjct: 316 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 375

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D + K GR+ ++  +F  M  +G+  D ++Y+T++  Y   G+ +EA  +   M S G++
Sbjct: 376 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 435

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTY+ L+ GY K  +  +   +F +M++  VSP+++TY+ ++    +      A ++
Sbjct: 436 PDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 495

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +    ++G + ++  Y+ ++  LCKN L + A+ +   +    ++    T+N +IDA 
Sbjct: 496 YVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDAL 553



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 179/364 (49%), Gaps = 14/364 (3%)

Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGY--GNTVYAFSALIS 236
             F+  R++  N       A+I IL + G+V+ A   FE  ++EG   GN VY  ++LI 
Sbjct: 284 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY--NSLIH 341

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRN 293
                   + A  +   M    +  N + +N++ID+  K G     V+E   +FD M+R 
Sbjct: 342 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG----RVIESEKLFDLMVRI 397

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           GV+PD IT+++L+      G  + A  L   MV  G+  D  TY+TL++  CK ++M  A
Sbjct: 398 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDA 457

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             +  EM +  +SP+++TY+ ++ G  +  R   A  ++  +   G  L+  +YN +L  
Sbjct: 458 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHG 517

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
             K    ++AL + + +    ++ +A T+N ++    K G+ DE + +F    ++ + PN
Sbjct: 518 LCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 577

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA---VS 530
             TY  + +     GL +E  Q+F   +  G   D  + + ++  L + G +  A   +S
Sbjct: 578 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 637

Query: 531 LLDE 534
           ++DE
Sbjct: 638 MIDE 641



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 177/380 (46%), Gaps = 43/380 (11%)

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG--IRKDAVTYN 443
           +DA ++F E+   GI  D  SYN +L+      R +EAL +   M   G     D V+Y+
Sbjct: 34  EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            ++ G+ K+G  D+    + +M    +SPN++TY+++I    K     +AM++     ++
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           G+  D + Y++++   C +G  + A+  L +M  +G+ P+VVTYNS++D   ++      
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKN------ 206

Query: 564 VDDVERDLGKQKESANL-DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
                   G+  E+  + D+M  +  K            I  +G L+   A +G      
Sbjct: 207 --------GRCTEARKIFDSMTKRGLKPE----------ITTYGTLLQGYATKGA----- 243

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQV- 678
              ++ + G+   M +  I PN   FS ++ A ++    E+A ++  ++R   L  N V 
Sbjct: 244 ---LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 300

Query: 679 YGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           YG   G+L   +      A+  F+++     S  +  YN+L   L    +   A+ ++LE
Sbjct: 301 YGAVIGILC--KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 358

Query: 739 GKRRQVWEN-VWSESCLDLH 757
              R +  N ++  S +D H
Sbjct: 359 MLDRGICLNTIFFNSIIDSH 378



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 129/293 (44%), Gaps = 2/293 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V  ++ +F+  +  G    +  +S LI  Y  +G   EA  +  SM    +KP+ VTY
Sbjct: 382 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 441

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           + +I+   K     K  + +F +M  +GV PD IT+N +L    +     AA+ L+  + 
Sbjct: 442 STLINGYCKIS-RMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 500

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G   ++ TYN +L  +CK    D A  +   +   ++     T++ MID   K GR D
Sbjct: 501 KSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRND 560

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A ++F      G+  +  +Y  +       G  EE   +   ME +G   D+   N ++
Sbjct: 561 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 620

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
               ++G+          +     S    T S  ID+ S GG Y+E  +   E
Sbjct: 621 RELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLS-GGKYQEYHRFLPE 672


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 272/547 (49%), Gaps = 26/547 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A I  L + G VD A  + +  + +G G   + ++ L+  + +    +EA  +F SM  
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS 339

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L PN  TY A+ID   K G + +  + I D+M+  G++ + +T+N+++   ++ G   
Sbjct: 340 SGLNPNRFTYTALIDGFIKEG-NIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMA 398

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +LFNEM+  G++ D +TYN L+D   K   M  A E++AEM A+ ++P+  TYS +I
Sbjct: 399 KAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLI 458

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G   +  L  A  +  +M   G+  +   Y T++  Y +  R+E A+ + K M ++G+ 
Sbjct: 459 SGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVL 518

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D   YN L+ G  +  K +E + +   M    + PN  TY   I++YSK G  + A + 
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F++   +G+  + V+Y+ LI   C  G    A+S    M ++G+ P++  Y++II +  +
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK 638

Query: 557 SATTECTVDDVERDL--GKQKESANLDAMCSQ--DDKDVQEAGRTDNQI--------IKV 604
           +  T+  +    + L  G   +    +++ S    + D+++A +  +++        I V
Sbjct: 639 NGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVV 698

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           +  L+      G+   + R+       +F ++ +  + P+VVT+S I++   +  +  +A
Sbjct: 699 YNTLINGLCKLGEV-TKARE-------LFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEA 750

Query: 665 SMLLEELRLFDNQVYGVAHGLLM---GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
             L +E+        G  + +L+   G   N+  +ALSLF E +     + SAF N+L D
Sbjct: 751 FKLFDEMISKGISPDGYIYCILIDGCGKEGNLE-KALSLFHEAQQKSVGSLSAF-NSLID 808

Query: 722 MLWHFGQ 728
                G+
Sbjct: 809 SFCKHGK 815



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/511 (25%), Positives = 232/511 (45%), Gaps = 68/511 (13%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +AMI  + + G++  A ++F   L  G     + ++ LI  Y +S    +A  +   MK 
Sbjct: 385 NAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKA 444

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P+  TY+ +I        D +   E+ D M+RNGV+P+   + +L+    +   +E
Sbjct: 445 RKLTPSPFTYSVLISGLCHSS-DLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYE 503

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L   M+  G+  D+F YN L+  +C+  +++ A  ++ +M  K I PN  TY   I
Sbjct: 504 MAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFI 563

Query: 377 DGYAKAGRLDDALNMFSEMKFLGI---------------------------------GL- 402
           + Y+K+G +  A   F +M   GI                                 GL 
Sbjct: 564 NLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLI 623

Query: 403 -DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D  +Y+ ++   +K G+ +EA+ V  +   +G+  D   YN+L+ G+ K+G  ++  ++
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           +++M  + ++PN++ Y+TLI+   K G   +A ++F E ++  L  DVV YS +ID  CK
Sbjct: 684 YDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCK 743

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
           +G +  A  L DEM  +GI P+   Y  +ID  G+    E  +        +QK   +L 
Sbjct: 744 SGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE--AQQKSVGSLS 801

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
           A                      F  L+      GK        ++    +F  M   K+
Sbjct: 802 A----------------------FNSLIDSFCKHGK--------VIEARELFDDMVDKKL 831

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            PN+VT++ +++A  +    E+A  L  ++ 
Sbjct: 832 TPNIVTYTILIDAYGKAEMMEEAEQLFLDME 862



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 169/341 (49%), Gaps = 2/341 (0%)

Query: 225 GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVV 284
           G+ +  F   I  +   G+  EA SVF +       P L+  N ++    K  +      
Sbjct: 169 GSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANM-MGLFW 227

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +++  M+   + PD  T+ +++    + G     + + +EM  +    ++FTYN  +  +
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGL 286

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C+   +D A E+   M  K + P+  TY+ ++DG+ K  R  +A  +F  M   G+  +R
Sbjct: 287 CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +Y  ++  + K G  EEAL +  EM + G++ + VTYNA++GG  K G+  +   +F +
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    + P+  TY+ LID Y K     +A ++  E K   L      YS LI  LC +  
Sbjct: 407 MLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           ++ A  +LD+M + G++PNV  Y ++I A+ + +  E  ++
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 178/356 (50%), Gaps = 2/356 (0%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           LG ++ A ++F  +++EG+  T+   + L+    ++        V+ SM    + P++ T
Sbjct: 185 LGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYT 244

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           Y  VI A  K G   K  + +  +M +   +P+  T+N+ +    + G  + A  +   M
Sbjct: 245 YTNVIKAHCKVGDVIKGKM-VLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLM 302

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           + +G+  D  TY  L+D  CK  +   A  I   MP+  ++PN  TY+ +IDG+ K G +
Sbjct: 303 MEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNI 362

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           ++AL +  EM   G+ L+ V+YN ++   AK G   +A+ +  EM  +G+  D  TYN L
Sbjct: 363 EEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLL 422

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + GY K     +   +  +MKA  ++P+  TYS LI         ++A ++  +  + G+
Sbjct: 423 IDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGV 482

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           K +V +Y  LI A  +    E A+ LL  M   G+ P++  YN +I    R+   E
Sbjct: 483 KPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVE 538



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 185/367 (50%), Gaps = 37/367 (10%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L +++IS   + G ++ A  +++  L+ G    +  ++ LI+   + G   +A  +F+ +
Sbjct: 663 LYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEI 722

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           +  +L P++VTY+ +ID   K G +     ++FD+M+  G+ PD   +  L+  C + G 
Sbjct: 723 EEKDLVPDVVTYSTIIDGYCKSG-NLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGN 781

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E A +LF+E   + +   +  +N+L+D+ CK  ++  A E+  +M  K ++PN+VTY+ 
Sbjct: 782 LEKALSLFHEAQQKSVGS-LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTI 840

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +ID Y KA  +++A  +F +M+   I  + ++Y ++L  Y ++G   + + + K+ME+ G
Sbjct: 841 LIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 900

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I  DA+ Y  +   Y K+GK                                     EA+
Sbjct: 901 IACDAIAYGVMASAYCKEGK-----------------------------------SLEAL 925

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++  +    G+K +  ++ ALI  LCK   + + + LL EM KE +  +  T N+++  F
Sbjct: 926 KLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGF 985

Query: 555 GRSATTE 561
            +S   +
Sbjct: 986 YKSGNED 992



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 160/309 (51%), Gaps = 4/309 (1%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            + +I+ L +LG+V  A+ +F+    +     V  +S +I  Y +SG   EA  +F+ M  
Sbjct: 700  NTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMIS 759

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
              + P+   Y  +ID CGK G + +  + +F +  +  V      FNSL+ + C  G + 
Sbjct: 760  KGISPDGYIYCILIDGCGKEG-NLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVI 817

Query: 316  EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            EA R LF++MV + +  +I TY  L+DA  K   M+ A ++  +M  +NI PN +TY+++
Sbjct: 818  EA-RELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSL 876

Query: 376  IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
            +  Y + G     +++F +M+  GI  D ++Y  + S Y K G+  EAL +  +    GI
Sbjct: 877  LLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 936

Query: 436  RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
            + +   ++AL+    K+ +   V  +  +M  + +S +  T +TL+  + K G   EA +
Sbjct: 937  KLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASK 996

Query: 496  IFREFKQAG 504
            +    ++ G
Sbjct: 997  VLGVMQRLG 1005


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 185/366 (50%), Gaps = 3/366 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S MI+   R  K+  A +     +  GY      F+ L++         EA+ + + M  
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              KP L+T N +++  C  G V     V + D M+  G QP+ +T+  +L V  + G  
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKV--SDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  L  +M  R I  D   Y+ ++D +CK   +D AF +  EM  K    +++TY+T+
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G+  AGR DD   +  +M    I  + V+++ ++  + K G+  EA  + KEM   GI
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + +TYN+L+ G+ K+ + +E  +M + M +    P+++T++ LI+ Y K     + ++
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +FRE    G+ A+ V Y+ L+   C++G +E A  L  EM    +RP++V+Y  ++D   
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484

Query: 556 RSATTE 561
            +   E
Sbjct: 485 DNGELE 490



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 182/371 (49%), Gaps = 4/371 (1%)

Query: 184 KREER--KNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
           K EER  K D  K  S +I  L + G +D A N+F     +G+   +  ++ LI  +  +
Sbjct: 253 KMEERNIKLDAVKY-SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
           G   +   +   M +  + PN+VT++ +ID+  K G   +   ++  +M++ G+ P+ IT
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEG-KLREADQLLKEMMQRGIAPNTIT 370

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           +NSL+    +    E A  + + M+ +G D DI T+N L++  CK  ++D   E+  EM 
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            + +  N VTY+T++ G+ ++G+L+ A  +F EM    +  D VSY  +L      G  E
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           +AL +  ++E S +  D   Y  ++ G     K D+   +F  +    V  +   Y+ +I
Sbjct: 491 KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
               +     +A  +FR+  + G   D + Y+ LI A   +    +A  L++EM   G  
Sbjct: 551 SELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFP 610

Query: 542 PNVVTYNSIID 552
            +V T   +I+
Sbjct: 611 ADVSTVKMVIN 621



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 203/436 (46%), Gaps = 31/436 (7%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +A+ +F  M +    P ++ +N +  A  K    ++ V+ +   M   G+     T + +
Sbjct: 71  DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTK-QYELVLALCKQMESKGIAHSIYTLSIM 129

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    R      A +   +++  G + D   +NTLL+ +C   ++  A E++  M     
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            P ++T +T+++G    G++ DA+ +   M   G   + V+Y  VL++  K G+   A+ 
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + ++ME   I+ DAV Y+ ++ G  K G  D    +F +M+      +++TY+TLI  + 
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
             G + +  ++ R+  +  +  +VV +S LID+  K G +  A  LL EM + GI PN +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDN 599
           TYNS+ID F +    E  +  V+  + K  +      +  ++  C        +A R D+
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC--------KANRIDD 421

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEIL----CILG-------VFQKMHKLKIKPNVVTF 648
            +     +L  E + +G   N      L    C  G       +FQ+M   +++P++V++
Sbjct: 422 GL-----ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476

Query: 649 SAILNACSRCNSFEDA 664
             +L+        E A
Sbjct: 477 KILLDGLCDNGELEKA 492



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 184/400 (46%), Gaps = 31/400 (7%)

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G  G+     V++F DM+++   P  I FN L +  ++   +E    L  +M  +GI   
Sbjct: 63  GLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHS 122

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           I+T + +++  C+  ++  AF  M ++      P+ V ++T+++G     R+ +AL +  
Sbjct: 123 IYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVD 182

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M  +G     ++ NT+++     G+  +A+++   M  +G + + VTY  +L    K G
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           +      +  +M+   +  + + YS +ID   K G    A  +F E +  G KAD++ Y+
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            LI   C  G  +    LL +M K  I PNVVT++ +ID+F +               GK
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE--------------GK 348

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
            +E+  L        K++ + G   N I   +  L+        KENR  + I  +  + 
Sbjct: 349 LREADQL-------LKEMMQRGIAPNTI--TYNSLIDGFC----KENRLEEAIQMVDLMI 395

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
            K       P+++TF+ ++N   + N  +D   L  E+ L
Sbjct: 396 SK----GCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 157/326 (48%), Gaps = 1/326 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+ D    +    +       V  FS LI ++ + G  +EA  +   M +  + PN +TY
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N++ID   K     +  +++ D M+  G  PD +TFN L+    +    +    LF EM 
Sbjct: 372 NSLIDGFCKEN-RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            RG+  +  TYNTL+   C+  ++++A ++  EM ++ + P++V+Y  ++DG    G L+
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            AL +F +++   + LD   Y  ++       + ++A  +   +   G++ DA  YN ++
Sbjct: 491 KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
               ++    +   +F +M  +  +P+ LTY+ LI  +        A ++  E K +G  
Sbjct: 551 SELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFP 610

Query: 507 ADVVLYSALIDALCKNGLVESAVSLL 532
           ADV     +I+ L    L +S + +L
Sbjct: 611 ADVSTVKMVINMLSSGELDKSFLDML 636


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 242/483 (50%), Gaps = 23/483 (4%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I  L  L  +  AK +       G    +  ++ LI    +     EA+ +   +
Sbjct: 229 IYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDL 288

Query: 255 KRYNLKPNLVTYNAVIDACGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
               LKP++VTY  ++  CG   V +F+  +E+ D+MLR    P     +SL+    + G
Sbjct: 289 AGKELKPDVVTYCTLV--CGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRG 346

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             E A NL   +   G+  +IF YN L+D++CKG   D A  +   M    + PN VTYS
Sbjct: 347 KVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYS 406

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +ID + + G+LD AL+   EM  +G+      YN++++ + K G    A  +  EM + 
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINK 466

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            +    VTY +L+GGY  +GK ++  R++ +M    + P++ T++TL+    + GL ++A
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDA 526

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           +++F E  +  +K + V Y+ +I+  C+ G +  A   L+EM ++GI P+  +Y  +I  
Sbjct: 527 VKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHG 586

Query: 554 F---GRSATTECTVDDVER---DLGKQKESANLDAMCSQDDKD-----VQEAG-RTDNQI 601
               G+++  +  VD + +   +L +   +  L   C +   +      Q+ G R  +  
Sbjct: 587 LCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLD 646

Query: 602 IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
           +  +G L+    G  K ++R        LG+ ++MH   +KP+ V ++++++A S+   F
Sbjct: 647 LVCYGVLI---DGSLKHKDR-----KVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698

Query: 662 EDA 664
           ++A
Sbjct: 699 KEA 701



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 218/481 (45%), Gaps = 23/481 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I  L +    D A+ +F+     G       +S LI  + R G    A+S    M  
Sbjct: 371 NALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMID 430

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLW 315
             LKP++  YN++I+   K G D      +  +M+   ++P  +T+ SL+   CS+G + 
Sbjct: 431 MGLKPSVYPYNSLINGHCKFG-DISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +A R L++EM  +GI   I+T+ TLL  + +   +  A ++  EM   N+ PN VTY+ M
Sbjct: 490 KALR-LYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVM 548

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+GY + G +  A    +EM   GI  D  SY  ++      G+  EA +    +     
Sbjct: 549 IEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + + Y  LL G+ ++GK +E   + + M    V  +L+ Y  LID   K    K  + 
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLG 668

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID--- 552
           + +E    GLK D V+Y+++IDA  K G  + A  + D M  EG  PN VTY ++I+   
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728

Query: 553 --AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK------- 603
              F   A   C+       +  Q        + ++   D+++A    N I+K       
Sbjct: 729 KAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTA 788

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
            +  L+     QG+ E            +  +M    + P+ +T++ +++   R N  + 
Sbjct: 789 TYNMLIRGFCRQGRMEEASE--------LITRMIGDGVSPDCITYTTMISELCRRNDVKK 840

Query: 664 A 664
           A
Sbjct: 841 A 841



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 184/416 (44%), Gaps = 73/416 (17%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK++ A  ++     +G   ++Y F+ L+S   R+G  ++A+ +F  M  +N+KPN VTY
Sbjct: 486 GKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTY 545

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPD--------------------------- 298
           N +I+  C +G  +     E  ++M+  G+ PD                           
Sbjct: 546 NVMIEGYCEEG--NMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603

Query: 299 --------RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
                    I +  LL    R G  E A ++  +M  RG+D D+  Y  L+D   K    
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDR 663

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
            +   ++ EM  + + P+ V Y++MID  +K G   +A  ++  M   G   + V+Y  V
Sbjct: 664 KVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723

Query: 411 LSIYAKLGRFEEALLVCKEMESS-----------------------------------GI 435
           ++   K G   EA ++C +M                                      G+
Sbjct: 724 INGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGL 783

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +  TYN L+ G+ +QG+ +E   +  +M  D VSP+ +TY+T+I    +    K+A++
Sbjct: 784 LANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIE 843

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           ++    + G++ D V Y+ LI   C  G +  A  L +EM ++G++PN  T  + I
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 193/442 (43%), Gaps = 68/442 (15%)

Query: 231 FSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           F  LI  Y RS    + + VF  M  + +L P + T +A++     G V F+H       
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALL----HGLVKFRH------- 207

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
                                    +  A  LF++M++ GI  D++ Y  ++ ++C+   
Sbjct: 208 -------------------------FGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKD 242

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  A E++ +M A     N+V Y+ +IDG  K  ++ +A+ +  ++    +  D V+Y T
Sbjct: 243 LSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCT 302

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    K+  FE  L +  EM            ++L+ G  K+GK +E   + +++    
Sbjct: 303 LVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFG 362

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           VSPN+  Y+ LID   KG  + EA  +F    + GL  + V YS LID  C+ G +++A+
Sbjct: 363 VSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTAL 422

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
           S L EM   G++P+V  YNS+I+         C   D+         SA    M    +K
Sbjct: 423 SFLGEMIDMGLKPSVYPYNSLING-------HCKFGDI---------SAAESLMAEMINK 466

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
            ++         +  +  L+     +GK     R        ++ +M    I P++ TF+
Sbjct: 467 KLEPT-------VVTYTSLMGGYCSKGKINKALR--------LYHEMTGKGIVPSIYTFT 511

Query: 650 AILNACSRCNSFEDASMLLEEL 671
            +L+   R     DA  L  E+
Sbjct: 512 TLLSGLFRAGLIRDAVKLFTEM 533



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 1/218 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + ++MI    + G    A  I++  +NEG       ++A+I+   ++G+  EA  + + M
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKM 743

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           +  N  PN VTY   +D   KG  D K  VE+ + +L+ G+  +  T+N L+    R G 
Sbjct: 744 RPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRGFCRQGR 802

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E A  L   M+  G+  D  TY T++  +C+   +  A E+   M  K I P+ V Y+T
Sbjct: 803 MEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           +I G   AG +  A  + +EM   G+  +  +  T +S
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 257/556 (46%), Gaps = 60/556 (10%)

Query: 182 AVKREERKNDQGKLASAMISILGRLG-----KVDLAKNIFETALNEGYGNTVYAFSALIS 236
           A++  +   D GK    +++     G     +V  A N+F+  L +G   T   +  LI 
Sbjct: 281 ALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIR 340

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD---FKHVVEIFDDMLRN 293
              + G  Q+A  +   M    L P+    + V+    KG ++   +K  V +F++M  +
Sbjct: 341 GCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVL----KGLLNDRRWKDAVCLFEEMADS 396

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G+ PD  T+N+L+    +      A NLF+ M   G+   I TYN+LL   CK   MD A
Sbjct: 397 GL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEA 455

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
            ++ +EMP +   PNVVTY T++ GY      D+A  +  EMK  G+  +  +YN +++ 
Sbjct: 456 VKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLING 515

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
              + R  E   + K   S G     +TYN+++ G+ K G       +++QM+   + PN
Sbjct: 516 ICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPN 575

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           ++TY++ ID Y + G    A+++  + ++ GL+ D+V Y+ALI+  C+ G +  A+ LL 
Sbjct: 576 IITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLV 635

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
            + K+G+ PN V YNS+I  +                        NL+ M        +E
Sbjct: 636 ILLKDGLAPNTVVYNSLITGY-----------------------KNLNMM--------KE 664

Query: 594 AGRTDNQIIKVFGQLVAEKA-------GQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
             +    +IK  G +VA+ +       G  K  N     +   L ++ +M      P+  
Sbjct: 665 VSKFYESMIK--GGIVADTSTYTTLIDGFSKDGN-----VAFALELYSEMMAKGYIPDAF 717

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEV 704
           TF+A+ +   R    + A  LLEE+R  D +     + +L+ GY RD    +A  L DE+
Sbjct: 718 TFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEM 777

Query: 705 KLMDSSTASAFYNALT 720
             M        Y+ L 
Sbjct: 778 LNMGIQPDDTTYDILV 793



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 199/389 (51%), Gaps = 19/389 (4%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K+  A N+F+     G   ++  +++L+  Y + G   EA+ +++ M     KPN+VTY 
Sbjct: 416 KLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYI 475

Query: 268 AVIDACGKGGV---DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFN 323
            ++    +G +   DF +   + D+M +NGV  +  T+N L+  +C    + E    +  
Sbjct: 476 TLM----RGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEV-DGMLK 530

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
             +  G    + TYN++++   K   M  AF +  +M  K + PN++TY++ IDGY + G
Sbjct: 531 SFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTG 590

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
             D AL M ++++  G+  D V+YN +++ + + G    AL +   +   G+  + V YN
Sbjct: 591 CSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYN 650

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           +L+ GY       EV + +E M    +  +  TY+TLID +SK G    A++++ E    
Sbjct: 651 SLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAK 710

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           G   D   ++AL   LC++G ++ A  LL+EM +  +RPNV  YN +I+ + R    +C 
Sbjct: 711 GYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLR----DCK 766

Query: 564 VDDVER------DLGKQKESANLDAMCSQ 586
           + +  R      ++G Q +    D + S+
Sbjct: 767 LQEAFRLHDEMLNMGIQPDDTTYDILVSK 795



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 192/454 (42%), Gaps = 78/454 (17%)

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G   K  + +F +M   G + D   F++L++ C + G+ E A  LF+EM    ID D   
Sbjct: 170 GSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRV 229

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y   + A+CK      A  ++ EM          TY TM+D   K GR+++AL +  EM+
Sbjct: 230 YALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMR 289

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG--- 453
             G  +D +   T++  Y        AL + KE    GI    V Y  L+ G  + G   
Sbjct: 290 DAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQ 349

Query: 454 -KYDEVRRM-------------------------------FEQMKADCVSPNLLTYSTLI 481
             Y+  R+M                               FE+M AD   P++ TY+ LI
Sbjct: 350 KAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEM-ADSGLPDVFTYNNLI 408

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
             + +    +EA+ +F   K+AG+K  +  Y++L+   CK G ++ AV L  EM  EG +
Sbjct: 409 HWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFK 468

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE---SAN-------------LDAMCS 585
           PNVVTY +++    R    +   D+    L + K+   S N             +D +C 
Sbjct: 469 PNVVTYITLM----RGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCE 524

Query: 586 QDD--KDVQEAG-----RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
            D   K     G      T N II  F      KAG                 V+Q+M +
Sbjct: 525 VDGMLKSFMSEGFIPTMMTYNSIINGF-----VKAGMMGSA----------FTVYQQMRE 569

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             + PN++T+++ ++   R    + A  +L ++R
Sbjct: 570 KGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVR 603



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 172/389 (44%), Gaps = 34/389 (8%)

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           + +  M+  GV PD  +   LL   +RG   + A  LF EM  RG   D + ++ L+ A 
Sbjct: 143 DTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSAC 202

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
            K    + A  +  EMP   I P+   Y+  I    K G    AL M  EMK +G     
Sbjct: 203 LKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCD 262

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +Y T++ +  K GR EEAL V  EM  +G + D +    L+ GY  + +      +F++
Sbjct: 263 FTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKE 322

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
              D + P  + Y  LI    + G+ ++A ++ R+    GL       S ++  L  +  
Sbjct: 323 TLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRR 382

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAM 583
            + AV L +EM   G+ P+V TYN++I    ++               K +E+ NL D M
Sbjct: 383 WKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAH--------------KLREALNLFDRM 427

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
                   ++AG   +  I  +  L+     +G     C  E    + ++ +M     KP
Sbjct: 428 --------KKAGVKPS--INTYNSLLMGYCKKG-----CMDE---AVKLYSEMPMEGFKP 469

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELR 672
           NVVT+  ++        F++A  LL+E++
Sbjct: 470 NVVTYITLMRGYIAKKDFDNAYALLDEMK 498



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 88/381 (23%), Positives = 158/381 (41%), Gaps = 54/381 (14%)

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A + ++ M   G+  D  S   +L   A+    ++AL +  EM   G R DA  ++AL+ 
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNL--------------------------------- 474
              K+G +++  R+F++M    + P+                                  
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260

Query: 475 --LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
              TY T++DV  K G  +EA+++  E + AG K DV++ + L+   C    V +A++L 
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQ 592
            E  K+GI P  V Y  +I    +   T+        +L +Q     L  + S  +  + 
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQ-----KAYELCRQMTGQGL--LPSTFELSLV 373

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL---C-------ILGVFQKMHKLKIK 642
             G  +++  K    L  E A  G  +      ++   C        L +F +M K  +K
Sbjct: 374 LKGLLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVK 433

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSL 700
           P++ T++++L    +    ++A  L  E+ +   +   V +  LM GY     +  A +L
Sbjct: 434 PSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYAL 493

Query: 701 FDEVKLMDSSTASAFYNALTD 721
            DE+K    S     YN L +
Sbjct: 494 LDEMKQNGVSCNDYTYNVLIN 514



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 2/195 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+   + G +  A  +    L +G       +++LI+ Y      +E    + SM +
Sbjct: 615 NALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIK 674

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +  +  TY  +ID   K G +    +E++ +M+  G  PD  TF +L     R G  +
Sbjct: 675 GGIVADTSTYTTLIDGFSKDG-NVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDID 733

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A+ L  EM    +  ++F YN L++   +  ++  AF +  EM    I P+  TY  ++
Sbjct: 734 GAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793

Query: 377 D-GYAKAGRLDDALN 390
              + +A    D LN
Sbjct: 794 SKKFLEADNCADVLN 808


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 152/621 (24%), Positives = 282/621 (45%), Gaps = 64/621 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMK 255
           S ++    R  + DL   +F   L  G        S L+     +   +EA++V  + M 
Sbjct: 161 SILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMS 220

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG--VQPDRITFNSLLAVCSRGG 313
                PN+ +Y+ ++       +  +  +++F  M + G    P+ + +N+++    + G
Sbjct: 221 ELGCVPNVFSYSIILKGLCDNSMS-QRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEG 279

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
               A +LF+EM  +G+  D+ TYN ++DA+CK   MD A  ++ +M      P+ VTY+
Sbjct: 280 ETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYN 339

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGI--------------------------------- 400
            MI GYA  GRL +A  MF +MK  G+                                 
Sbjct: 340 CMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAK 399

Query: 401 --GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
               D VSY T+L  YA  G F + + +   M+S+GI  D   +N L+  Y K+G  D+ 
Sbjct: 400 GHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDA 459

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +F +M+   VSP+++TYST+I  +S+ G   +AM+ F +    G++ +  +Y ++I  
Sbjct: 460 MLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQG 519

Query: 519 LCKNGLVESAVSLLDEMTKEGI-RPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQK 575
            C +G +  A  L+ EM  +GI RP++V +NS+I++  +        D  D+  D+G++ 
Sbjct: 520 FCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERP 579

Query: 576 E----SANLDAMC--SQDDK-----DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
           +    ++ +D  C   + DK     D  E    +  I+  +  L+      G+  +    
Sbjct: 580 DVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIV-TYSTLLDGYFKNGRINDG--- 635

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG 684
                L +F++M +  +KPN VT+  +L    R      A     E+      V    +G
Sbjct: 636 -----LTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYG 690

Query: 685 LLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
           +++G   R+N   +A+ LF ++  M+   +    N + + ++   +K  A+ +       
Sbjct: 691 IILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISAS 750

Query: 743 QVWENVWSESCLDLHLMSSGA 763
            +  N  +   + ++L+  GA
Sbjct: 751 GLLPNESTYGVMIINLLKDGA 771



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 192/360 (53%), Gaps = 2/360 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + ++ ++ L + G+   A  IF++   +G+   + ++  L+  Y   G+  + I +FNSM
Sbjct: 372 ICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSM 431

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           K   +  +   +N +I A  K G+     + IF +M + GV PD +T++++++  SR G 
Sbjct: 432 KSNGIAADCRVFNILIHAYAKRGM-VDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGR 490

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS-PNVVTYS 373
              A   FN+MV RGI  +   Y++++   C    +  A E+++EM  K I  P++V ++
Sbjct: 491 LTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFN 550

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           ++I+   K GR+ DA ++F  +  +G   D +++ +++  Y  +G+ ++A  +   ME  
Sbjct: 551 SVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVV 610

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G+  D VTY+ LL GY K G+ ++   +F +M+   V PN +TY  ++    + G    A
Sbjct: 611 GVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAA 670

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            + F E  ++G    V +Y  ++  LC+N   + A+ L  ++    ++ ++   N++I+A
Sbjct: 671 RKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINA 730



 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 180/360 (50%), Gaps = 4/360 (1%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           ++ + +I    + G VD A  IF     +G    V  +S +ISA+ R G   +A+  FN 
Sbjct: 441 RVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQ 500

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGV-QPDRITFNSLLAVCSR 311
           M    ++PN   Y+++I   C  GG+      E+  +M+  G+ +PD + FNS++    +
Sbjct: 501 MVARGIQPNTAVYHSIIQGFCMHGGL--VKAKELVSEMINKGIPRPDIVFFNSVINSLCK 558

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            G    A ++F+ +   G   D+ T+ +L+D  C   +MD AF+I+  M    +  ++VT
Sbjct: 559 DGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVT 618

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           YST++DGY K GR++D L +F EM+  G+  + V+Y  +L+   + GR   A     EM 
Sbjct: 619 YSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMI 678

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            SG       Y  +LGG  +    DE   +F+++    V  ++   +T+I+   K    +
Sbjct: 679 ESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKE 738

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA ++F     +GL  +   Y  +I  L K+G VE A ++   M K GI P     N II
Sbjct: 739 EAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRII 798



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/430 (23%), Positives = 178/430 (41%), Gaps = 82/430 (19%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA--------ARNLFNEMVH-----RGIDQ 332
           +FD++ R        + N  L   +R     A        A  LFN +       R +  
Sbjct: 96  MFDELFRQATPVPGRSLNGFLTALARATSSSACITDGPALALALFNRVCREQAGPRVVPL 155

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMA---------------------------------- 358
            + TY+ L+D  C+  + DL   +                                    
Sbjct: 156 TVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVL 215

Query: 359 --EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG--IGLDRVSYNTVLSIY 414
              M      PNV +YS ++ G         AL++F  M   G     + V+YNTV+  +
Sbjct: 216 LHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGF 275

Query: 415 AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
            K G   +A  +  EM   G++ D VTYN ++    K    D+   +  QM  +   P+ 
Sbjct: 276 FKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDT 335

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           +TY+ +I  Y+  G  KEA ++FR+ K  GL  ++V+ ++ + +LCK+G  + A  + D 
Sbjct: 336 VTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDS 395

Query: 535 MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEA 594
           MT +G +P++V+Y +++  +   A+     D +   L    +S  + A C          
Sbjct: 396 MTAKGHKPDIVSYCTLLHGY---ASEGWFADMI--GLFNSMKSNGIAADC---------- 440

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
                   +VF  L+   A +G  ++         + +F +M +  + P+VVT+S +++A
Sbjct: 441 --------RVFNILIHAYAKRGMVDD--------AMLIFTEMQQQGVSPDVVTYSTVISA 484

Query: 655 CSRCNSFEDA 664
            SR     DA
Sbjct: 485 FSRMGRLTDA 494



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 147/301 (48%), Gaps = 1/301 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I+ L + G+V  A +IF+   + G    V  F++LI  Y   G   +A  + ++M+ 
Sbjct: 550 NSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEV 609

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++ ++VTY+ ++D   K G      + +F +M R GV+P+ +T+  +LA   R G   
Sbjct: 610 VGVETDIVTYSTLLDGYFKNG-RINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTV 668

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AAR  F+EM+  G    +  Y  +L  +C+    D A  +  ++   N+  ++   +TMI
Sbjct: 669 AARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMI 728

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +   K  R ++A  +F+ +   G+  +  +Y  ++    K G  E+A  +   ME SGI 
Sbjct: 729 NAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIV 788

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             +   N ++    ++G+  +      ++    +     T S ++ ++S+ G Y E M++
Sbjct: 789 PGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKL 848

Query: 497 F 497
            
Sbjct: 849 L 849



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 143/316 (45%), Gaps = 6/316 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ ++      G  + A++ F   V R  + N    +  ++I      G +  AK +   
Sbjct: 478 YSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTA--VYHSIIQGFCMHGGLVKAKELVSE 535

Query: 219 ALNEGYGNT-VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKG 276
            +N+G     +  F+++I++  + G   +A  +F+ +     +P+++T+ ++ID  C  G
Sbjct: 536 MINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVG 595

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
            +D     +I D M   GV+ D +T+++LL    + G       LF EM  +G+  +  T
Sbjct: 596 KMD--KAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVT 653

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y  +L  + +  +   A +   EM     +  V  Y  ++ G  +    D+A+ +F ++ 
Sbjct: 654 YGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLG 713

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
            + +       NT+++   K+ R EEA  +   + +SG+  +  TY  ++    K G  +
Sbjct: 714 TMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVE 773

Query: 457 EVRRMFEQMKADCVSP 472
           +   MF  M+   + P
Sbjct: 774 DANNMFSSMEKSGIVP 789


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 197/364 (54%), Gaps = 3/364 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G +DLA ++ +          V  ++ +I    +  +  +A+++F  M    ++P+
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           + TY+++I   C  G   +     +  DM+   + P+ +TF++L+    + G    A  L
Sbjct: 293 VFTYSSLISCLCNYG--RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           ++EM+ R ID DIFTY++L++  C   ++D A  +   M +K+  PNVVTYST+I G+ K
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           A R+++ + +F EM   G+  + V+Y T++  + +    + A +V K+M S G+  + +T
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN LL G  K GK  +   +FE ++   + P++ TY+ +I+   K G  ++  ++F    
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G+  +V+ Y+ +I   C+ G  E A SLL +M ++G  PN  TYN++I A  R    E
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590

Query: 562 CTVD 565
            + +
Sbjct: 591 ASAE 594



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 231/485 (47%), Gaps = 50/485 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S  I+   R  ++ LA  +    +  GY   +   S+L++ Y  S    +A+++ + M  
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKH-----VVEIFDDMLRNGVQPDRITFNSLL-AVCS 310
              KP+  T+  +I         F H      V + D M++ G QPD +T+ +++  +C 
Sbjct: 182 MGYKPDTFTFTTLIHGL------FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           RG + + A +L  +M    I+ D+  YNT++D +CK   MD A  +  EM  K I P+V 
Sbjct: 236 RGDI-DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TYS++I      GR  DA  + S+M    I  + V+++ ++  + K G+  EA  +  EM
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
               I  D  TY++L+ G+    + DE + MFE M +    PN++TYSTLI  + K    
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           +E M++FRE  Q GL  + V Y+ LI    +    ++A  +  +M   G+ PN++TYN +
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474

Query: 551 IDAF---GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
           +D     G+ A      + ++R               S  + D+     T N +I+  G 
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQR---------------STMEPDIY----TYNIMIE--GM 513

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
             A K   G        E+ C L +        + PNV+ ++ +++   R  S E+A  L
Sbjct: 514 CKAGKVEDG-------WELFCNLSL------KGVSPNVIAYNTMISGFCRKGSKEEADSL 560

Query: 668 LEELR 672
           L++++
Sbjct: 561 LKKMK 565



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 196/366 (53%), Gaps = 9/366 (2%)

Query: 188 RKNDQGKLAS------AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
           +K ++GK+ +       +I  L +   +D A N+F    N+G    V+ +S+LIS     
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
           G   +A  + + M    + PN+VT++A+IDA  K G       +++D+M++  + PD  T
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG-KLVEAEKLYDEMIKRSIDPDIFT 365

Query: 302 FNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           ++SL+   C    L EA +++F  M+ +    ++ TY+TL+   CK  +++   E+  EM
Sbjct: 366 YSSLINGFCMHDRLDEA-KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
             + +  N VTY+T+I G+ +A   D+A  +F +M  +G+  + ++YN +L    K G+ 
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
            +A++V + ++ S +  D  TYN ++ G  K GK ++   +F  +    VSPN++ Y+T+
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM 544

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I  + + G  +EA  + ++ K+ G   +   Y+ LI A  ++G  E++  L+ EM   G 
Sbjct: 545 ISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604

Query: 541 RPNVVT 546
             +  T
Sbjct: 605 AGDAST 610



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 207/429 (48%), Gaps = 41/429 (9%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           V++F DM+++   P  + FN LL+  ++   +E   +L  +M   GI  D++TY+  ++ 
Sbjct: 68  VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINC 127

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C+ +Q+ LA  ++A+M      P++VT S++++GY  + R+ DA+ +  +M  +G   D
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             ++ T++       +  EA+ +  +M   G + D VTY  ++ G  K+G  D    + +
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M+   +  +++ Y+T+ID   K     +A+ +F E    G++ DV  YS+LI  LC  G
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDD-VERDLGKQ--KES 577
               A  LL +M +  I PNVVT++++IDAF   G+    E   D+ ++R +       S
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367

Query: 578 ANLDAMCSQD-------------DKDVQEAGRTDNQIIKVFG---------QLVAEKAGQ 615
           + ++  C  D              KD      T + +IK F          +L  E + +
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427

Query: 616 GKKENRCRQEILCILG------------VFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           G   N      L I G            VF++M  + + PN++T++ +L+   +      
Sbjct: 428 GLVGNTVTYTTL-IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 486

Query: 664 ASMLLEELR 672
           A ++ E L+
Sbjct: 487 AMVVFEYLQ 495



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 162/312 (51%), Gaps = 9/312 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L N G WS A +  +  ++R  + N      SA+I    + GK+  A+ +++ 
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIER--KINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +       ++ +S+LI+ +       EA  +F  M   +  PN+VTY+ +I    KG  
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI----KGFC 409

Query: 279 DFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
             K V   +E+F +M + G+  + +T+ +L+    +    + A+ +F +MV  G+  +I 
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYN LLD +CK  ++  A  +   +    + P++ TY+ MI+G  KAG+++D   +F  +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G+  + ++YNT++S + + G  EEA  + K+M+  G   ++ TYN L+    + G  
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDR 589

Query: 456 DEVRRMFEQMKA 467
           +    + ++M++
Sbjct: 590 EASAELIKEMRS 601



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 157/341 (46%), Gaps = 41/341 (12%)

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L D I    ++D A ++  +M      P++V ++ ++   AK  + +  +++  +M+ 
Sbjct: 56  NRLSDII----KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           LGI  D  +Y+  ++ + +  +   AL V  +M   G   D VT ++LL GY    +  +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              + +QM      P+  T++TLI          EA+ +  +  Q G + D+V Y  +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            LCK G ++ A+SLL +M K  I  +VV YN+IID   +       +DD           
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK----HMDDA---------- 277

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
             L+     D+K +    R D   +  +  L++     G+  +  R        +   M 
Sbjct: 278 --LNLFTEMDNKGI----RPD---VFTYSSLISCLCNYGRWSDASR--------LLSDMI 320

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
           + KI PNVVTFSA+++A      F     L+E  +L+D  +
Sbjct: 321 ERKINPNVVTFSALIDA------FVKEGKLVEAEKLYDEMI 355


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 206/406 (50%), Gaps = 47/406 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S  I+   R  ++ LA  I    +  GYG ++   ++L++ +       EA+++ + M  
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKH-----VVEIFDDMLRNGVQPDRITFNSLL-AVCS 310
              +P+ VT+  ++         F+H      V + + M+  G QPD +T+ +++  +C 
Sbjct: 174 MGYQPDTVTFTTLVHGL------FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227

Query: 311 RG--------------GLWEA--------------------ARNLFNEMVHRGIDQDIFT 336
           RG              G  EA                    A +LFN+M  +GI  D+FT
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM- 395
           YN L+  +C   +   A  ++++M  KNI+P++V ++ +ID + K G+L +A  ++ EM 
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           K      D V+YNT++  + K  R EE + V +EM   G+  + VTY  L+ G+ +    
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D  + +F+QM +D V P+++TY+ L+D     G  + A+ +F   ++  +K D+V Y+ +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           I+ALCK G VE    L   ++ +G++PNVVTY +++  F R    E
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 513



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 189/346 (54%), Gaps = 8/346 (2%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + E  + +G    +  + A+I+   + G    A+++ N M++  ++ ++V YN +ID
Sbjct: 199 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258

Query: 272 ACGKGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
              K    +KH+    ++F+ M   G++PD  T+N L++     G W  A  L ++M+ +
Sbjct: 259 GLCK----YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK 314

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-PAKNISPNVVTYSTMIDGYAKAGRLDD 387
            I+ D+  +N L+DA  K  ++  A ++  EM  +K+  P+VV Y+T+I G+ K  R+++
Sbjct: 315 NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE 374

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
            + +F EM   G+  + V+Y T++  + +    + A +V K+M S G+  D +TYN LL 
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           G    G  +    +FE M+   +  +++TY+T+I+   K G  ++   +F      G+K 
Sbjct: 435 GLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKP 494

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           +VV Y+ ++   C+ GL E A +L  EM ++G  PN  TYN++I A
Sbjct: 495 NVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 196/398 (49%), Gaps = 10/398 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           +T L+  L    + S+A+      V+R   K  Q  L +  A+I+ L + G+ DLA N+ 
Sbjct: 183 FTTLVHGLFQHNKASEAVA----LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
                      V  ++ +I    +  +  +A  +FN M+   +KP++ TYN +I   C  
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH-RGIDQDI 334
           G   +     +  DML   + PD + FN+L+    + G    A  L++EMV  +    D+
Sbjct: 299 G--RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
             YNTL+   CK  +++   E+  EM  + +  N VTY+T+I G+ +A   D+A  +F +
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G+  D ++YN +L      G  E AL+V + M+   ++ D VTY  ++    K GK
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            ++   +F  +    V PN++TY+T++  + + GL +EA  +F E K+ G   +   Y+ 
Sbjct: 477 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNT 536

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           LI A  ++G   ++  L+ EM   G   +  T+  + +
Sbjct: 537 LIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTN 574



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 221/484 (45%), Gaps = 14/484 (2%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +AI +F  M +    P++V ++ ++ A  K    F  V+ + + M   G+  +  T++  
Sbjct: 58  DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMN-KFDLVISLGEQMQNLGISHNLYTYSIF 116

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    R      A  +  +M+  G    I T N+LL+  C G ++  A  ++ +M     
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            P+ VT++T++ G  +  +  +A+ +   M   G   D V+Y  V++   K G  + AL 
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           +  +ME   I  D V YN ++ G  K    D+   +F +M+   + P++ TY+ LI    
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK-EGIRPNV 544
             G + +A ++  +  +  +  D+V ++ALIDA  K G +  A  L DEM K +   P+V
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
           V YN++I  F +    E  + +V R++ ++    N     +      Q     + Q+  V
Sbjct: 357 VAYNTLIKGFCKYKRVEEGM-EVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM--V 413

Query: 605 FGQLVAEKAGQGKKENRCRQEILC-------ILGVFQKMHKLKIKPNVVTFSAILNACSR 657
           F Q+V++             + LC        L VF+ M K  +K ++VT++ ++ A  +
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473

Query: 658 CNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAF 715
               ED   L   L L   +   V +  +M G+ R  +  +A +LF E+K       S  
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533

Query: 716 YNAL 719
           YN L
Sbjct: 534 YNTL 537



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 190/397 (47%), Gaps = 18/397 (4%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS----- 197
           ++++   K C  D  T+  ++  L  RGE   A+            K ++GK+ +     
Sbjct: 202 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL--------NKMEKGKIEADVVIY 253

Query: 198 -AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
             +I  L +   +D A ++F     +G    V+ ++ LIS     G   +A  + + M  
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG-VQPDRITFNSLLAVCSRGGLW 315
            N+ P+LV +NA+IDA  K G       +++D+M+++    PD + +N+L+    +    
Sbjct: 314 KNINPDLVFFNALIDAFVKEG-KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E    +F EM  RG+  +  TY TL+    +    D A  +  +M +  + P+++TY+ +
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +DG    G ++ AL +F  M+   + LD V+Y T++    K G+ E+   +   +   G+
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + VTY  ++ G+ ++G  +E   +F +MK D   PN  TY+TLI    + G    + +
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           + +E +  G   D   +  + + L    L +S + +L
Sbjct: 553 LIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDML 589



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 106/208 (50%)

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++D A  +  +M      P++V +S ++   AK  + D  +++  +M+ LGI  +  +Y+
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
             ++ + +  +   AL +  +M   G     VT N+LL G+    +  E   + +QM   
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
              P+ +T++TL+    +     EA+ +       G + D+V Y A+I+ LCK G  + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           ++LL++M K  I  +VV YN+IID   +
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCK 262



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 131/292 (44%), Gaps = 25/292 (8%)

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           E  F G   D    N    +   L + ++A+ +  +M  S      V ++ LL    K  
Sbjct: 31  ERSFAGASSDDCRENLSRKVLQDL-KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMN 89

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           K+D V  + EQM+   +S NL TYS  I+ + +      A+ I  +  + G    +V  +
Sbjct: 90  KFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLN 149

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           +L++  C    +  AV+L+D+M + G +P+ VT+ +++    +       V  VER + K
Sbjct: 150 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209

Query: 574 QKE------SANLDAMCSQDDKDV-------QEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
             +       A ++ +C + + D+        E G+ +  ++ ++  ++         + 
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV-IYNTII---------DG 259

Query: 621 RCR-QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            C+ + +     +F KM    IKP+V T++ +++       + DAS LL ++
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 206/411 (50%), Gaps = 17/411 (4%)

Query: 159 YTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISIL---GRLGKVDLAK 213
           YT+  ++R L  RG  + A+     AV  E  +     +      IL    R G    A 
Sbjct: 160 YTYFPVVRALCARGRIADAL-----AVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 214

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
            + E     G    V   + +++A    G   EA+ +   +  +  +P++V+YNAV+   
Sbjct: 215 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVL--- 271

Query: 274 GKGGVDFKH---VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
            KG    K    V E+ ++M+R    P+ +TFN+L++   R GL+E    +  +MV  G 
Sbjct: 272 -KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGC 330

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             DI  Y T++D ICK   +++A EI+  MP+  + PNVV Y+T++ G   A R ++   
Sbjct: 331 TPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEE 390

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           + +EM      LD V++N ++  + + G  +  + + ++M   G   D +TY  ++ G+ 
Sbjct: 391 LLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFC 450

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K+G  DE   + + M A    PN ++Y+ ++        + +A  +  +  Q G   + +
Sbjct: 451 KEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPI 510

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            ++ LI+ LCK GLVE A+ LL +M   G  P++++Y+++ID  G++  T+
Sbjct: 511 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 561



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 177/355 (49%), Gaps = 1/355 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS L R G  +    +    +  G    +  ++ +I    + G+ + A  + N M  
Sbjct: 303 NTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS 362

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           Y LKPN+V YN ++         ++   E+  +M       D +TFN L+    + GL +
Sbjct: 363 YGLKPNVVCYNTLLKGLCSAE-RWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD 421

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               L  +M+  G   D+ TY T+++  CK   +D A  ++  M A    PN ++Y+ ++
Sbjct: 422 RVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVL 481

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G   A R  DA ++ S+M   G  L+ +++NT+++   K G  E+A+ + K+M  +G  
Sbjct: 482 KGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCS 541

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D ++Y+ ++ G GK GK DE   +   M    +SPN + YS++    S+ G   + +Q+
Sbjct: 542 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQM 601

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           F   +   +++D VLY+A+I +LCK G  E A+  L  M   G  PN  TY  +I
Sbjct: 602 FDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 656



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 171/350 (48%), Gaps = 3/350 (0%)

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
           + + E  +       +  F+ LIS   R+G  +    V   M  +   P++  Y  +ID 
Sbjct: 284 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDG 343

Query: 273 -CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            C +G ++  H  EI + M   G++P+ + +N+LL        WE    L  EM  +   
Sbjct: 344 ICKEGHLEVAH--EILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCP 401

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  T+N L+D  C+   +D   E++ +M      P+V+TY+T+I+G+ K G +D+A+ +
Sbjct: 402 LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVML 461

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
              M   G   + +SY  VL       R+ +A  +  +M   G   + +T+N L+    K
Sbjct: 462 LKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCK 521

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           +G  ++   + +QM  +  SP+L++YST+ID   K G   EA+++       G+  + ++
Sbjct: 522 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII 581

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           YS++  AL + G +   + + D +    IR + V YN++I +  +   TE
Sbjct: 582 YSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 631



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 121/525 (23%), Positives = 239/525 (45%), Gaps = 44/525 (8%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           ++A+++ Y R+G  + A  +  ++    + PN  TY  V+ A C +G +     + + D+
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRI--ADALAVLDE 184

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M R G  P    ++ +L    RGG + +A  +  ++  RG   D+   N +L+AIC    
Sbjct: 185 MPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGS 244

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A  ++ ++P+    P+VV+Y+ ++ G   A R      +  EM  +    + V++NT
Sbjct: 245 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 304

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++S   + G FE    V  +M   G   D   Y  ++ G  K+G  +    +  +M +  
Sbjct: 305 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 364

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + PN++ Y+TL+        ++E  ++  E        D V ++ L+D  C+NGLV+  +
Sbjct: 365 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 424

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKESAN----LDAM 583
            LL++M + G  P+V+TY ++I+ F +    +  V  ++     G +  + +    L  +
Sbjct: 425 ELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 484

Query: 584 CSQ----DDKDVQ----EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
           CS     D +D+     + G   N I   F  L+     +G  E          + + ++
Sbjct: 485 CSAERWVDAEDLMSQMIQQGCPLNPI--TFNTLINFLCKKGLVEQA--------IELLKQ 534

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQ-------VY-GVAHGLLM 687
           M      P+++++S +++   +    ++A   LE L +  N+       +Y  +A  L  
Sbjct: 535 MLVNGCSPDLISYSTVIDGLGKAGKTDEA---LELLNVMVNKGMSPNTIIYSSIASALSR 591

Query: 688 GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
             R N  +Q   +FD ++     + +  YNA+   L   G+   A
Sbjct: 592 EGRINKVIQ---MFDNIQDTTIRSDAVLYNAVISSLCKRGETERA 633



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 143/275 (52%), Gaps = 3/275 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           F+ L+  + ++G     I +   M  +   P+++TY  VI+  C +G +D    V +   
Sbjct: 407 FNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLID--EAVMLLKS 464

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G +P+ I++  +L        W  A +L ++M+ +G   +  T+NTL++ +CK   
Sbjct: 465 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 524

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++ A E++ +M     SP++++YST+IDG  KAG+ D+AL + + M   G+  + + Y++
Sbjct: 525 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 584

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           + S  ++ GR  + + +   ++ + IR DAV YNA++    K+G+ +        M +  
Sbjct: 585 IASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG 644

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
             PN  TY+ LI   +  G  KEA ++  E    G
Sbjct: 645 CVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 195/371 (52%), Gaps = 12/371 (3%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + SA+I  L + G+   A+N+F     +G    ++ ++ +I+ +  SG   EA  +   M
Sbjct: 250 IYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREM 309

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               + P++VT++ +I+A  K G  F    E++++ML  G+ P+ IT+NS++   S+   
Sbjct: 310 FERKMSPDVVTFSVLINALVKEG-KFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNR 368

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +AA  +F  M  +G   D+ T++ L+D  C   ++D   +++ EM  + +  N +TY+T
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTT 428

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS- 433
           +I G+ + G L+ AL++  EM   G+  + V+ NT+L      G+ ++AL + K M+ S 
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSK 488

Query: 434 ----------GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
                      +  D  TYN L+ G   +GK+ E   ++E+M    + P+ +TY+++ID 
Sbjct: 489 MDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDG 548

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K     EA Q+F      G   DVV ++ LI+  CK G V   + +  EM + GI  N
Sbjct: 549 LCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVAN 608

Query: 544 VVTYNSIIDAF 554
            +TY ++I  F
Sbjct: 609 AITYRTLIHGF 619



 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 240/478 (50%), Gaps = 30/478 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I       K+  A + F      G+  ++  FS L+          EA+  F+ +  
Sbjct: 115 TILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI-- 172

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              KPN++ +  +++  C +G V     V + D M+ +G+QP++IT+ +++    + G  
Sbjct: 173 --CKPNVIAFTTLMNGLCREGRV--VEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 228

Query: 316 EAARNLFNEM--VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            +A NL  +M  V R I  ++  Y+ ++D + K  +   A  + +EM  K ISPN+ TY+
Sbjct: 229 VSALNLLRKMEEVSR-IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYN 287

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            MI+G+  +GR  +A  +  EM    +  D V+++ +++   K G+F EA  +  EM   
Sbjct: 288 CMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPR 347

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI  + +TYN+++ G+ KQ + D   RMF  M     SP+++T+S LID Y       + 
Sbjct: 348 GIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDG 407

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           M++  E  + GL A+ + Y+ LI   C+ G + +A+ LL EM   G+ PNVVT N+++D 
Sbjct: 408 MKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDG 467

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
              +   +   D +E     QK   +LDA  S    DV+   +T N  I + G +   K 
Sbjct: 468 LCNNGKLK---DALEMFKVMQKSKMDLDA--SHPFNDVEPDVQTYN--ILICGLINEGKF 520

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            + ++             ++++M    + P+ +T++++++   + +  ++A+ + + +
Sbjct: 521 SEAEE-------------LYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSM 565



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 184/390 (47%), Gaps = 24/390 (6%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKRE--ERKNDQGKLA-SAMISILGRLGKVDLAKNI 215
           Y  ++    + G WS+A +     + RE  ERK     +  S +I+ L + GK   A+ +
Sbjct: 286 YNCMINGFCSSGRWSEAQR-----LLREMFERKMSPDVVTFSVLINALVKEGKFFEAEEL 340

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CG 274
           +   L  G       ++++I  + +      A  +F  M      P+++T++ +ID  CG
Sbjct: 341 YNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCG 400

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQD 333
              VD    +++  +M R G+  + IT+ +L+   C  G L  AA +L  EM+  G+  +
Sbjct: 401 AKRVD--DGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNL-NAALDLLQEMISSGVCPN 457

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEM-----------PAKNISPNVVTYSTMIDGYAKA 382
           + T NTLLD +C   ++  A E+   M           P  ++ P+V TY+ +I G    
Sbjct: 458 VVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINE 517

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G+  +A  ++ EM   G+  D ++YN+V+    K  R +EA  +   M S G   D VT+
Sbjct: 518 GKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTF 577

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             L+ GY K G+  +   +F +M    +  N +TY TLI  + + G    A+ IF+E   
Sbjct: 578 TTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMIS 637

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLL 532
           +G+  D +    ++  L     ++ AV  L
Sbjct: 638 SGVYPDTITIRNMLTGLWSKEELKRAVQCL 667



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 195/437 (44%), Gaps = 76/437 (17%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           +++F  M+R+   P  I F  LL V  R    +   +L  +M  R I  +I+++  L+  
Sbjct: 61  IDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKC 120

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI--------------------------- 376
            C  +++  A     ++      P++VT+ST++                           
Sbjct: 121 FCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPNVIAF 180

Query: 377 ----DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
               +G  + GR+ +A+ +   M   G+  ++++Y T++    K+G    AL + ++ME 
Sbjct: 181 TTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEE 240

Query: 433 -SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            S I+ + V Y+A++ G  K G+  + + +F +M+   +SPNL TY+ +I+ +   G + 
Sbjct: 241 VSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWS 300

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA ++ RE  +  +  DVV +S LI+AL K G    A  L +EM   GI PN +TYNS+I
Sbjct: 301 EAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMI 360

Query: 552 DAFGRS-------------ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
           D F +              AT  C+ D +         S  +D  C         A R D
Sbjct: 361 DGFSKQNRLDAAERMFYLMATKGCSPDVITF-------SILIDGYCG--------AKRVD 405

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEIL----CILG-------VFQKMHKLKIKPNVVT 647
           + +     +L+ E + +G   N      L    C LG       + Q+M    + PNVVT
Sbjct: 406 DGM-----KLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVT 460

Query: 648 FSAILNACSRCNSFEDA 664
            + +L+        +DA
Sbjct: 461 CNTLLDGLCNNGKLKDA 477



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 146/323 (45%), Gaps = 36/323 (11%)

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A ++   M      P V+ +  ++    +  R D  +++  +M+   I  +  S+  
Sbjct: 57  LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++  +    +   AL    ++   G     VT++ LL G   + +  E    F Q+    
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI---- 172

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             PN++ ++TL++   + G   EA+ +     + GL+ + + Y  ++D +CK G   SA+
Sbjct: 173 CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232

Query: 530 SLLDEMTKEG-IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           +LL +M +   I+PNVV Y++IID   +               G+Q ++ NL +      
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIIDGLWKD--------------GRQTDAQNLFS------ 272

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
            ++QE G + N  +  +  ++      G+     R        + ++M + K+ P+VVTF
Sbjct: 273 -EMQEKGISPN--LFTYNCMINGFCSSGRWSEAQR--------LLREMFERKMSPDVVTF 321

Query: 649 SAILNACSRCNSFEDASMLLEEL 671
           S ++NA  +   F +A  L  E+
Sbjct: 322 SVLINALVKEGKFFEAEELYNEM 344



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 52/248 (20%), Positives = 101/248 (40%), Gaps = 39/248 (15%)

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L  G+ +    D+   +F  M      P ++ +  L+ V  +       + + R+ +   
Sbjct: 47  LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           +  ++  ++ LI   C    +  A+S   ++TK G  P++VT+++++          C  
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGL-------CVE 159

Query: 565 DDVERDL-------------------GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
           D V   L                   G  +E   ++A+   D   + E G   NQI   +
Sbjct: 160 DRVSEALHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLD--RMVEDGLQPNQI--TY 215

Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL-KIKPNVVTFSAILNACSRCNSFEDA 664
           G +V      G        + +  L + +KM ++ +IKPNVV +SAI++   +     DA
Sbjct: 216 GTIVDGMCKMG--------DTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDA 267

Query: 665 SMLLEELR 672
             L  E++
Sbjct: 268 QNLFSEMQ 275



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 11/128 (8%)

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQV-YGVAHGLLMGYRDNIWVQA 697
           KPNV+ F+ ++N   R     +A  LL+ +    L  NQ+ YG     +    D   V A
Sbjct: 174 KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT--VSA 231

Query: 698 LSLF---DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
           L+L    +EV  +  +     Y+A+ D LW  G++  AQ +  E + + +  N+++ +C+
Sbjct: 232 LNLLRKMEEVSRIKPNVV--IYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCM 289

Query: 755 DLHLMSSG 762
                SSG
Sbjct: 290 INGFCSSG 297


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 238/469 (50%), Gaps = 31/469 (6%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           +++ +I +  R G  +EA  +   M   +  P++V+Y+ VID  C  G  + K  +++ D
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG--ELKKALKLMD 317

Query: 289 DMLRNGVQPDRITFNS-LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           DM   G++P+R T+NS +L +C  G  +EA + L  EM+ + I  D   Y TL+    K 
Sbjct: 318 DMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL-REMMSQKIIPDNVVYTTLIHGFFKL 376

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             +  A +   EM +K ISP+ +TY+T+I G+ + G++ +  N+F EM   G+  D V+Y
Sbjct: 377 GHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTY 436

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
            T++ +Y K G    A  +  EM   G+  + VTY AL+ G  K G+ D    + ++M+ 
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             +  N+  Y+++++   K G  ++A+++ +E + AG+  D + Y+ +IDA C+ G ++ 
Sbjct: 497 KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDK 556

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
           A  LL EM   G++P VVT+N +++ F      E    D +R LG   E   +    + +
Sbjct: 557 AHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE----DGDRLLGWMLEKGIVPDAITYN 612

Query: 588 DKDVQEAGRTD-NQIIKVFGQLVAEKAGQGKKENRCRQEILCILG------------VFQ 634
               Q   R   N   K++ ++      QG   +     IL I G            +++
Sbjct: 613 TLMKQHCIRNSMNTTTKIYKRM----RNQGVAPDSNTYNIL-IKGHCKARNLKEAWFLYK 667

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVY 679
           +M +    P V +++A++    +   F +A  L EE+R    + D ++Y
Sbjct: 668 EMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIY 716



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 193/361 (53%), Gaps = 7/361 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I +L ++GK   A+ +    +++        ++ LI  + + G+ + A   F+ M  
Sbjct: 332 NSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLS 391

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGG 313
             + P+ +TY  +I   G+GG     V+E   +F +M+  G++PD +T+ +L+ V  + G
Sbjct: 392 KKISPDYITYTTLIQGFGQGG----KVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAG 447

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
               A +L NEMV  G+  +I TY  L+D +CK  ++D A E++ EM  K +  NV  Y+
Sbjct: 448 EMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYN 507

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           +M++G  KAG ++ A+ +  EM+  GI  D ++Y TV+  Y +LG  ++A  + +EM   
Sbjct: 508 SMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDR 567

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G++   VT+N L+ G+   G  ++  R+   M    + P+ +TY+TL+  +         
Sbjct: 568 GLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTT 627

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            +I++  +  G+  D   Y+ LI   CK   ++ A  L  EM ++G  P V +YN++I  
Sbjct: 628 TKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKR 687

Query: 554 F 554
           F
Sbjct: 688 F 688



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 191/389 (49%), Gaps = 34/389 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L RLGKV  A  +            V ++S +I  Y   G  ++A+ + + M+ 
Sbjct: 262 NIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQI 321

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFK-------------------------------HVV- 284
             LKPN  TYN++I    K G  F+                               HV  
Sbjct: 322 KGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRT 381

Query: 285 --EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             + FD+ML   + PD IT+ +L+    +GG     +NLF+EM+ RG+  D  TY TL+D
Sbjct: 382 ANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLID 441

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
             CK  +M  AF +  EM    ++PN+VTY  +IDG  K G LD A  +  EM+  G+ L
Sbjct: 442 VYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL 501

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           +   YN++++   K G  E+A+ + KEME +GI  DA+TY  ++  Y + G  D+  ++ 
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLL 561

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           ++M    + P ++T++ L++ +   G+ ++  ++     + G+  D + Y+ L+   C  
Sbjct: 562 QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR 621

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             + +   +   M  +G+ P+  TYN +I
Sbjct: 622 NSMNTTTKIYKRMRNQGVAPDSNTYNILI 650



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 210/419 (50%), Gaps = 21/419 (5%)

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLA-VCSRGGLWE 316
           PN + ++          V+  H+ E   + D +L  G+     + N+ L+ + +     E
Sbjct: 188 PNPIAFDIFFQVL----VEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIE 243

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +F E    GI  +  +YN ++ ++C+  ++  A  ++ +M  ++ +P+VV+YST+I
Sbjct: 244 MAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DGY   G L  AL +  +M+  G+  +R +YN+++ +  K+G+  EA  V +EM S  I 
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D V Y  L+ G+ K G      + F++M +  +SP+ +TY+TLI  + +GG   E   +
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNL 420

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F E    GLK D V Y+ LID  CK G + +A SL +EM + G+ PN+VTY ++ID   +
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
               + T +++  ++ K+    N+    S  +  + +AG  + Q IK+  ++        
Sbjct: 481 HGELD-TANELLDEMRKKGLQLNVCIYNSMVN-GICKAGNIE-QAIKLMKEMEVAGIDPD 537

Query: 617 KKENRCRQEILCILGVFQKMHKL-------KIKPNVVTFSAILNACSRCNSFEDASMLL 668
                   +  C LG   K HKL        ++P VVTF+ ++N        ED   LL
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL 596



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 175/339 (51%), Gaps = 3/339 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I   G+ GKV   +N+F   ++ G       ++ LI  Y ++G    A S+ N M +
Sbjct: 402 TTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQ 461

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + PN+VTY A+ID  C  G +D  +  E+ D+M + G+Q +   +NS++    + G  
Sbjct: 462 MGMTPNIVTYGALIDGLCKHGELDTAN--ELLDEMRKKGLQLNVCIYNSMVNGICKAGNI 519

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  L  EM   GID D  TY T++DA C+   +D A +++ EM  + + P VVT++ +
Sbjct: 520 EQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVL 579

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ++G+   G L+D   +   M   GI  D ++YNT++  +           + K M + G+
Sbjct: 580 MNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D+ TYN L+ G+ K     E   ++++M      P + +Y+ LI  + K   + EA +
Sbjct: 640 APDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARE 699

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           +F E +  GL AD  +Y+  +D   + G VE  ++L DE
Sbjct: 700 LFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 186/369 (50%), Gaps = 1/369 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    +LG V  A   F+  L++        ++ LI  +G+ G   E  ++F+ M  
Sbjct: 367 TTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS 426

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             LKP+ VTY  +ID   K G +  +   + ++M++ G+ P+ +T+ +L+    + G  +
Sbjct: 427 RGLKPDEVTYTTLIDVYCKAG-EMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L +EM  +G+  ++  YN++++ ICK   ++ A ++M EM    I P+ +TY+T+I
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y + G +D A  +  EM   G+    V++N +++ +  LG  E+   +   M   GI 
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            DA+TYN L+  +  +   +   +++++M+   V+P+  TY+ LI  + K    KEA  +
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFL 665

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           ++E  + G    V  Y+ALI    K      A  L +EM   G+  +   YN  +D    
Sbjct: 666 YKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYE 725

Query: 557 SATTECTVD 565
               E T++
Sbjct: 726 EGDVEITLN 734



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%), Gaps = 3/274 (1%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+I  L + G++D A  + +    +G    V  ++++++   ++G  ++AI +   M+  
Sbjct: 473 ALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVA 532

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            + P+ +TY  VIDA C  G +D  H  ++  +ML  G+QP  +TFN L+      G+ E
Sbjct: 533 GIDPDAITYTTVIDAYCRLGDIDKAH--KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE 590

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               L   M+ +GI  D  TYNTL+   C    M+   +I   M  + ++P+  TY+ +I
Sbjct: 591 DGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+ KA  L +A  ++ EM   G      SYN ++  + K  +F EA  + +EM   G+ 
Sbjct: 651 KGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLV 710

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
            D   YN  +    ++G  +    + ++    C+
Sbjct: 711 ADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCL 744


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 196/376 (52%), Gaps = 11/376 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA++    +LGK++LA+ + +    E     V  FS++I+ Y + G   +A+ V   M +
Sbjct: 465 SALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQ 524

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIF-DDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            N+ PN + Y  +ID   K G   + V + F  +M    ++   + F+ LL    R G  
Sbjct: 525 RNVMPNTIVYAILIDGYFKAGE--QDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRM 582

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + AR+L  +M  +GID DI  Y +L+D   K      A  I+ EM  KNI  +VV Y+ +
Sbjct: 583 DEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNAL 642

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G  + G+ D    + S M  LG+  D ++YNT+++ Y   G+ E+AL +  EM+S GI
Sbjct: 643 IKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGI 701

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +AVTYN L+GG  K G  ++     ++M      P  +T+  L+  YS+     + +Q
Sbjct: 702 MPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQ 761

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I  +   +GL+  + +Y+ LI   C+ G+   A  +LDEM K GI  ++VTYN++I  + 
Sbjct: 762 IHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGY- 820

Query: 556 RSATTECTVDDVERDL 571
                 CT   VE+ L
Sbjct: 821 ------CTGSHVEKAL 830



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 142/564 (25%), Positives = 273/564 (48%), Gaps = 51/564 (9%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRY-------------------NLKPNLVTYNA 268
           +  ++ L+ A+ ++G    A S+FN +  +                   NL+P LVTY  
Sbjct: 267 IVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTT 326

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           +I A C   GV+  H   ++  M+ NG+ PD +T +S+L   C  G L EAA  LF EM 
Sbjct: 327 LIAAYCKFVGVEESH--SLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV-LFREMY 383

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G+D +  +Y T+++++ K  ++  AF + ++M  + IS ++VT +T++DG  K G+  
Sbjct: 384 EMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTK 443

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A  +F  +  L +  + V+Y+ +L  Y KLG+ E A LV ++ME   +  + +T+++++
Sbjct: 444 EAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSII 503

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GY K+G   +   +  +M    V PN + Y+ LID Y K G    A    +E K   L+
Sbjct: 504 NGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLE 563

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
              V++  L++ L + G ++ A SL+ +M  +GI P++V Y S+ID + +       +  
Sbjct: 564 ESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSI 623

Query: 567 VERDLGKQKESANLDAMCSQD-DKDVQEAGRTD-----NQIIKV--------FGQLVAEK 612
           V+     ++++   D +      K +   G+ D     +++I++        +  ++   
Sbjct: 624 VQE---MKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTY 680

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             +GK E+         L +  +M    I PN VT++ ++    +  + E A   L+E+ 
Sbjct: 681 CIKGKTEDA--------LDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEML 732

Query: 673 LFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKR 730
           + +     + H  L+  Y R     + L + +++       +   YN L  +    G  R
Sbjct: 733 VMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTR 792

Query: 731 GAQLVVLEGKRRQVWENVWSESCL 754
            A++V+ E  +R +  ++ + + L
Sbjct: 793 KAKVVLDEMVKRGISADLVTYNAL 816



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 192/362 (53%), Gaps = 4/362 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L + G+V  A N+    +  G    +   + ++    + G  +EA  VF ++ +
Sbjct: 395 ATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILK 454

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            NL PN VTY+A++D  C  G ++   +V     M +  V P+ ITF+S++   ++ G+ 
Sbjct: 455 LNLAPNCVTYSALLDGYCKLGKMELAELV--LQKMEKEHVPPNVITFSSIINGYAKKGML 512

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A ++  EMV R +  +   Y  L+D   K  + D+A +   EM ++ +  + V +  +
Sbjct: 513 SKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDIL 572

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ++   + GR+D+A ++  +M   GI  D V+Y +++  Y K G    AL + +EM+   I
Sbjct: 573 LNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNI 632

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R D V YNAL+ G  + GKYD  R +  +M    ++P+ +TY+T+I+ Y   G  ++A+ 
Sbjct: 633 RFDVVAYNALIKGLLRLGKYDP-RYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALD 691

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I  E K  G+  + V Y+ LI  LCK G VE A S LDEM      P  +T+  ++ A+ 
Sbjct: 692 ILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYS 751

Query: 556 RS 557
           RS
Sbjct: 752 RS 753



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 191/379 (50%), Gaps = 8/379 (2%)

Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
           +  R  +   +   +++ L R+G++D A+++     ++G    +  +++LI  Y + G  
Sbjct: 558 KSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQ 617

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGK-GGVDFKHVVEIFDDMLRNGVQPDRITFN 303
             A+S+   MK  N++ ++V YNA+I    + G  D ++V      M+  G+ PD IT+N
Sbjct: 618 LAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCS---RMIELGLAPDCITYN 674

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
           +++      G  E A ++ NEM   GI  +  TYN L+  +CK   ++ A   + EM   
Sbjct: 675 TIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVM 734

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
              P  +T+  ++  Y+++ + D  L +  ++   G+ L    YNT+++++ +LG   +A
Sbjct: 735 EFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKA 794

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
            +V  EM   GI  D VTYNAL+ GY      ++  + + QM  D ++PN+ TY+TL+  
Sbjct: 795 KVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGG 854

Query: 484 YSKGGL----YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
            S  GL     +E  ++  E  + GL  +   Y  L+    + G  +  + L  EM  +G
Sbjct: 855 LSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKG 914

Query: 540 IRPNVVTYNSIIDAFGRSA 558
             P + TYN +I  + +S 
Sbjct: 915 FVPTLKTYNVLISDYAKSG 933



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 212/471 (45%), Gaps = 59/471 (12%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G   T+  ++ L+  +  SG   +   +++ M    + P++ + N ++ + C  G +D  
Sbjct: 89  GLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLA 148

Query: 282 HVVEIFDDMLRNG--VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
                    LRN   V  D +T+N+++    + GL +    L +EMV RG+  D  T N 
Sbjct: 149 L------GYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNI 202

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+   C+   +  A  +M  +    ++ +V+  +T+IDGY +AG +  A  +        
Sbjct: 203 LVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSD 262

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEM-------------------ESSGIRKDAV 440
           + +D V+YNT+L  + K G    A  +  E+                   E   ++   V
Sbjct: 263 VKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLV 322

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY  L+  Y K    +E   ++++M  + + P+++T S+++  + + G   EA  +FRE 
Sbjct: 323 TYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREM 382

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            + GL  + V Y+ +I++L K+G V  A +L  +M   GI  ++VT  +++D   +    
Sbjct: 383 YEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFK---- 438

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
                     +GK KE+  +        + + +     N +   +  L+      GK E 
Sbjct: 439 ----------VGKTKEAEEV-------FETILKLNLAPNCV--TYSALLDGYCKLGKME- 478

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               E+     V QKM K  + PNV+TFS+I+N  ++      A  +L E+
Sbjct: 479 --LAEL-----VLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREM 522



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 177/392 (45%), Gaps = 23/392 (5%)

Query: 170 GEWSKAIQCFAFAVKRE-ERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGN 226
           G + +  Q  A ++ +E + KN +  + +  A+I  L RLGK D  + +    +  G   
Sbjct: 610 GYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAP 668

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
               ++ +I+ Y   G  ++A+ + N MK Y + PN VTYN +I   C  G V+      
Sbjct: 669 DCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVE--KAES 726

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
             D+ML     P  IT   L+   SR    +    +  ++V  G++  +  YNTL+   C
Sbjct: 727 ALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFC 786

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           +      A  ++ EM  + IS ++VTY+ +I GY     ++ AL  +S+M   GI  +  
Sbjct: 787 RLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNIT 846

Query: 406 SYNTVLSIYAKLGRFEEALL----VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
           +YNT+L   +  G  EE +     +  EM   G+  +A TY+ L+ GYG+ G   +   +
Sbjct: 847 TYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIIL 906

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL------ 515
             +M      P L TY+ LI  Y+K G   EA ++  +    G   +   Y  L      
Sbjct: 907 HIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLN 966

Query: 516 ------IDALCKNGLVESAVSLLDEMTKEGIR 541
                 ID   K         LL EM ++G++
Sbjct: 967 LSYEPEIDRSLKRSYEIEVKKLLIEMGRKGLK 998



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 189/418 (45%), Gaps = 45/418 (10%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F  M   G+ P    +N+LL   +  GL    + ++++M+  G+  D+F+ N L+ ++CK
Sbjct: 82  FSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCK 141

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +DLA   +      +I    VTY+T+I G+ + G +D    + SEM   G+  D ++
Sbjct: 142 VGDLDLALGYLRNNDVVDIDN--VTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSIT 199

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
            N ++  Y ++G  + A  V   +   G+ KD +  N L+ GY + G   +   + E   
Sbjct: 200 CNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSW 259

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF-------------------KQAGLKA 507
              V  +++TY+TL+  + K G    A  +F E                    +   L+ 
Sbjct: 260 RSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQP 319

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT-TECTVDD 566
            +V Y+ LI A CK   VE + SL  +M   GI P+VVT +SI+  F R    TE  V  
Sbjct: 320 TLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLF 379

Query: 567 VER-DLGKQKESANLDAMCSQDDKD--VQEAGRTDNQIIK-------VFGQLVAE---KA 613
            E  ++G      +   + +   K   V EA    +Q++        V    V +   K 
Sbjct: 380 REMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKV 439

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           G+ K+             VF+ + KL + PN VT+SA+L+   +    E A ++L+++
Sbjct: 440 GKTKEAEE----------VFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKM 487



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 69/342 (20%), Positives = 134/342 (39%), Gaps = 78/342 (22%)

Query: 404 RVSYNTVLSIYA---KLGRFEEALLVCKEMESSGIRKDAVT------------YNALLGG 448
           RV  NT++  ++   +L RF     + +   SS I KD++             +  L+  
Sbjct: 10  RVQTNTLIFFFSPPTRLRRFFYPTPITRTF-SSQIHKDSIFIPPTKTHLYVSFFCTLIRL 68

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           Y    ++      F  M+A  + P L  ++TL+  ++  GL  +   ++ +    G+  D
Sbjct: 69  YLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPD 128

Query: 509 VVLYSALIDALCK---------------------------------NGLVESAVSLLDEM 535
           V   + L+ +LCK                                  GLV+    LL EM
Sbjct: 129 VFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEM 188

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTE----CTVDDVERDLGKQKESAN--LDAMC----- 584
            K G+  + +T N ++  + R    +       + V+  + K     N  +D  C     
Sbjct: 189 VKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLM 248

Query: 585 SQDDKDVQEAGRTDNQI-IKVFGQLVAEKAGQGKKENRCRQEILC--ILGVFQKMHKLK- 640
           SQ  + ++ + R+D +I I  +  L+      G   +  R E L   ILG ++   +LK 
Sbjct: 249 SQATELIENSWRSDVKIDIVTYNTLLKAFCKTG---DLTRAESLFNEILGFWKDEDRLKN 305

Query: 641 -----------IKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                      ++P +VT++ ++ A  +    E++  L +++
Sbjct: 306 NDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKM 347


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 189/361 (52%), Gaps = 3/361 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L + G+ + AK +    L  G   + Y ++ LI  Y   G   EA+S+   M  
Sbjct: 273 NVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVL 332

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
               P + TYN+ I    K G      ++   DML N + PD +++N+L+   C  G L 
Sbjct: 333 KGASPTVATYNSFIYGLCKLG-RMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLM 391

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +A   LF+E+    +   I TYNTLLD +C+  ++++A ++  EM  + I+P++VTY+ +
Sbjct: 392 KAFL-LFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTIL 450

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ++G  K G L  A   F EM   G+ LD  +Y T +    KLG    A  + +EM + G 
Sbjct: 451 VNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D + YN ++ G  K G  +E   + ++M +D V P+ +TY+++I  + + G  ++  +
Sbjct: 511 PPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGRE 570

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           IF E    GL   VV Y+ LI      G +E A     EM ++GI PNV+TYNS+I+   
Sbjct: 571 IFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLC 630

Query: 556 R 556
           +
Sbjct: 631 K 631



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 145/517 (28%), Positives = 247/517 (47%), Gaps = 44/517 (8%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  ++ T    G   T+  ++ L+ +Y + G  Q+ + + + M+R    PN VTYN +I+
Sbjct: 218 AVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 277

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              K G +F+    +  +ML+ G++    T+N L+      G+   A +L  EMV +G  
Sbjct: 278 GLSKKG-EFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
             + TYN+ +  +CK  +M  A + +++M A N+ P+VV+Y+T+I GY + G L  A  +
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 396

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F E++ + +    V+YNT+L    + G  E A  +  EM + GI  D VTY  L+ G  K
Sbjct: 397 FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCK 456

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G     +  F++M  + +  +   Y+T I    K G    A  +  E    G   D+++
Sbjct: 457 MGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLII 516

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           Y+ ++D LCK G +E A  LL +M  +G+ P+ VTY SII A   +             L
Sbjct: 517 YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR-----------L 565

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
            K +E             ++   G T +  +  +  L+   AG+G+ E   R  I     
Sbjct: 566 RKGREIF----------YEMLSKGLTPS--VVTYTVLIHGHAGKGRLE---RAFI----- 605

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMG 688
            F +M +  I PNV+T+++++N   +    + A     E+    +F N+    ++ +L+ 
Sbjct: 606 YFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNK---YSYTILIN 662

Query: 689 YRDNI--WVQALSLF----DEVKLMDSSTASAFYNAL 719
              N+  W +ALSL+    D     DS T SA    L
Sbjct: 663 ENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 145/273 (53%)

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           +  + +FD M+++ + PD    N +L +     L   A  ++  M   GI   I TYNTL
Sbjct: 181 EQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTL 240

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           LD+ CKG ++    ++++EM  +  +PN VTY+ +I+G +K G  + A  +  EM   G+
Sbjct: 241 LDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGL 300

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
            +   +YN ++  Y   G   EAL + +EM   G      TYN+ + G  K G+  +  +
Sbjct: 301 KVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQ 360

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
               M A+ + P++++Y+TLI  Y + G   +A  +F E +   L   +V Y+ L+D LC
Sbjct: 361 QLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLC 420

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           + G +E A  L  EM  EGI P++VTY  +++ 
Sbjct: 421 RQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 137/257 (53%), Gaps = 1/257 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++G + +A+  F+  L+EG     YA++  I    + G    A S+   M      P+L+
Sbjct: 456 KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLI 515

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
            YN V+D   K G + +   E+   M+ +GV PD +T+ S++      G     R +F E
Sbjct: 516 IYNVVVDGLCKLG-NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+ +G+   + TY  L+       +++ AF   +EM  K I PNV+TY+++I+G  K  R
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +D A N F+EM   GI  ++ SY  +++    +G ++EAL + K+M   G++ D+ T++A
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694

Query: 445 LLGGYGKQGKYDEVRRM 461
           LL   GK  K   VR++
Sbjct: 695 LLKQLGKDCKLQAVRQL 711



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 131/300 (43%), Gaps = 30/300 (10%)

Query: 458 VRRMFEQMKADCVSP--NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           + R+ + +   CVS   ++     LI VYSK  + ++ + +F +  ++ L  DV   + +
Sbjct: 146 MHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRI 205

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           +  L    L+  AV +   M + GI+P +VTYN+++D++ +    +  +D +      Q+
Sbjct: 206 LRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSE---MQR 262

Query: 576 ESANLDAMCSQDD--KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
                   C+ +D   +V   G +     +    L+ E    G K +      L I G F
Sbjct: 263 RG------CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPL-IYGYF 315

Query: 634 QK---------MHKLKIK---PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV 681
            K           ++ +K   P V T+++ +    +     DA   L ++ L +N +  V
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM-LANNLLPDV 374

Query: 682 A--HGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
              + L+ GY R    ++A  LFDE++ +        YN L D L   G+   AQ + +E
Sbjct: 375 VSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVE 434


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 150/575 (26%), Positives = 264/575 (45%), Gaps = 79/575 (13%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V A+S +I  +   G   +A S+F+ M R  +KP++VTYN +IDA C    +D   +V  
Sbjct: 265 VVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELV-- 322

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
              M  +G QPD +T++ ++    + G L EAA+ +F EM  RG+  +I T N+ L ++C
Sbjct: 323 LRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAK-MFREMKKRGLIPNIVTCNSFLASLC 381

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  +   A E    M AK   P++ +Y T++ GYA  G   D + +F+ MK  GI  +  
Sbjct: 382 KHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCH 441

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            +  ++  YAK G  ++A+L+  EM+  G+  D VTY+ ++  + + G+  +    F QM
Sbjct: 442 VFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQM 501

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL-KADVVLYSALIDALCKNGL 524
            A  + PN   YS++I  +   G   +A ++  E    G+ + D+V +S++I++LCK+G 
Sbjct: 502 VARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGR 561

Query: 525 V-----------------------------------ESAVSLLDEMTKEGIRPNVVTYNS 549
           V                                   + A  +LD M   G+ P++VTYN+
Sbjct: 562 VMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNT 621

Query: 550 IIDAF---GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT--------- 597
           ++D +   GR         +++R  G +  +     M +     +  AGRT         
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRK-GVKPNTVTYGIMLA----GLFRAGRTVAARKKFHE 676

Query: 598 -----DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
                    + ++G ++      G   N C  E + +   FQK+  + +K ++   + ++
Sbjct: 677 MIESGTTVTVSIYGIILG-----GLCRNNCADEAIIL---FQKLGTMNVKFSITILNTMI 728

Query: 653 NACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMD 708
           NA  +    E+A  L   +     L +   YGV   ++   +D     A ++F  ++   
Sbjct: 729 NAMYKVQRKEEAKELFATISASGLLPNESTYGVM--IINLLKDGGVEDANNMFSSMEKSG 786

Query: 709 SSTASAFYNALTDMLWHFGQ--KRGAQLVVLEGKR 741
               S   N +  ML   G+  K G  L  ++GKR
Sbjct: 787 IVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKR 821



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 137/533 (25%), Positives = 247/533 (46%), Gaps = 27/533 (5%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRYNLKPNL 263
           R  + DL   +F   L  G        + L+     +   +EA++V  + M      PN 
Sbjct: 169 RARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNA 228

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNG--VQPDRITFNSLLAVCSRGGLWEAARNL 321
           V+Y+ V+ A     +  +  +++   M + G    PD + +++++      G    A +L
Sbjct: 229 VSYSIVLKALCDNSMS-QRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSL 287

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F+EM  +G+  D+ TYN ++DA+CK   MD A  ++ +M      P+ VTYS MI GYA 
Sbjct: 288 FHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYAT 347

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            GRL +A  MF EMK  G+  + V+ N+ L+   K GR +EA      M + G + D  +
Sbjct: 348 LGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFS 407

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  LL GY  +G + ++  +F  MK++ ++ N   ++ LI  Y+K G+  +AM IF E +
Sbjct: 408 YCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQ 467

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF----GRS 557
           Q G+  DVV YS +I    + G +  A+   ++M   GI+PN   Y+SII  F    G  
Sbjct: 468 QQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLV 527

Query: 558 ATTECTVDDVERDLGKQKE---SANLDAMCS----QDDKDVQEAGRT--DNQIIKVFGQL 608
              E   + + + + +      S+ ++++C      D  D+ +      +   +  F  L
Sbjct: 528 KAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSL 587

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
           +      GK +            +   M  + ++P++VT++ +L+   +     D   L 
Sbjct: 588 IDGYCLVGKMDK--------AFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLF 639

Query: 669 EELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
            E++    +   V +G+++   +R    V A   F E+    ++   + Y  +
Sbjct: 640 REMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGII 692



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 197/435 (45%), Gaps = 39/435 (8%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ ++    N GE  KA   F   + R+  K D     + +I  L +   +D A+ +   
Sbjct: 268 YSTVIHGFFNEGETGKACSLF-HEMTRQGVKPDVVTY-NLIIDALCKARAMDKAELVLRQ 325

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G       +S +I  Y   G  +EA  +F  MK+  L PN+VT N+ + +  K G 
Sbjct: 326 MTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGR 385

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K   E FD M   G +PD  ++ +LL   +  G +     LFN M   GI  +   + 
Sbjct: 386 S-KEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFT 444

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+ A  K   +D A  I  EM  + +SP+VVTYST+I  +++ GRL DA+  F++M   
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVAR 504

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI----------------------- 435
           GI  +   Y++++  +   G   +A  +  EM + GI                       
Sbjct: 505 GIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMD 564

Query: 436 -------------RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
                        R   +T+N+L+ GY   GK D+  ++ + M+   V P+++TY+TL+D
Sbjct: 565 AHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLD 624

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            Y K G   + + +FRE ++ G+K + V Y  ++  L + G   +A     EM + G   
Sbjct: 625 GYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTV 684

Query: 543 NVVTYNSIIDAFGRS 557
            V  Y  I+    R+
Sbjct: 685 TVSIYGIILGGLCRN 699



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 182/374 (48%), Gaps = 39/374 (10%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +F +  + G     + F+ LI AY + G   +A+ +F  M++  + P++VTY+ VI    
Sbjct: 427 LFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFS 486

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQ- 332
           + G      +E F+ M+  G+QP+   ++S++   C  GGL +A + L +EM+++GI + 
Sbjct: 487 RMG-RLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKA-KELVSEMINKGIPRP 544

Query: 333 ----------------------DIF-------------TYNTLLDAICKGAQMDLAFEIM 357
                                 DIF             T+N+L+D  C   +MD AF+I+
Sbjct: 545 DIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKIL 604

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
             M    + P++VTY+T++DGY K GR++D L +F EM+  G+  + V+Y  +L+   + 
Sbjct: 605 DAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRA 664

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           GR   A     EM  SG       Y  +LGG  +    DE   +F+++    V  ++   
Sbjct: 665 GRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITIL 724

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           +T+I+   K    +EA ++F     +GL  +   Y  +I  L K+G VE A ++   M K
Sbjct: 725 NTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEK 784

Query: 538 EGIRPNVVTYNSII 551
            GI P     N II
Sbjct: 785 SGIVPGSRLLNRII 798



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 190/427 (44%), Gaps = 77/427 (18%)

Query: 247 AISVFNSMKRYNLK-----PNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRI 300
           A+++FN + R         P   TYN ++D C +    D    + +F  +LR G++ D+I
Sbjct: 136 ALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLG--LALFGCILRTGLKMDQI 193

Query: 301 TFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           T N+LL  +C      EA   L + M   G   +  +Y+ +L A+C  +    A +++  
Sbjct: 194 TANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQM 253

Query: 360 MPAKN--ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
           M  +    SP+VV YST+I G+            F+E                       
Sbjct: 254 MAKQGGACSPDVVAYSTVIHGF------------FNE----------------------- 278

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G   +A  +  EM   G++ D VTYN ++    K    D+   +  QM  D   P+ +TY
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTY 338

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           S +I  Y+  G  KEA ++FRE K+ GL  ++V  ++ + +LCK+G  + A    D MT 
Sbjct: 339 SCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTA 398

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
           +G +P++ +Y +++  +   A+  C  D +   L    +S  + A C             
Sbjct: 399 KGHKPDIFSYCTLLHGY---ASEGCFADMI--GLFNSMKSNGIAANC------------- 440

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
                 VF  L+   A +G  ++         + +F +M +  + P+VVT+S +++  SR
Sbjct: 441 -----HVFTILIHAYAKRGMVDD--------AMLIFTEMQQQGVSPDVVTYSTVISTFSR 487

Query: 658 CNSFEDA 664
                DA
Sbjct: 488 MGRLTDA 494



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 170/395 (43%), Gaps = 35/395 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    + G VD A  IF     +G    V  +S +IS + R G   +A+  FN M  
Sbjct: 444 TILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVA 503

Query: 257 YNLKPNLVTYNAVIDA-CGKGG---------------------VDFKHVV---------- 284
             ++PN   Y+++I   C  GG                     V F  V+          
Sbjct: 504 RGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVM 563

Query: 285 ---EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
              +IFD     G +P  ITFNSL+      G  + A  + + M   G++ DI TYNTLL
Sbjct: 564 DAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLL 623

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           D   K  +++    +  EM  K + PN VTY  M+ G  +AGR   A   F EM   G  
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTT 683

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
           +    Y  +L    +    +EA+++ +++ +  ++      N ++    K  + +E + +
Sbjct: 684 VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKEL 743

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F  + A  + PN  TY  +I    K G  ++A  +F   +++G+     L + +I  L +
Sbjct: 744 FATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLE 803

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            G +  A + L ++  + I     T + ++  F R
Sbjct: 804 KGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSR 838



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 150/301 (49%), Gaps = 1/301 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++I+ L + G+V  A +IF+ A + G    V  F++LI  Y   G   +A  + ++M+ 
Sbjct: 550 SSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEV 609

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P++VTYN ++D   K G      + +F +M R GV+P+ +T+  +LA   R G   
Sbjct: 610 VGVEPDIVTYNTLLDGYFKNG-RINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTV 668

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AAR  F+EM+  G    +  Y  +L  +C+    D A  +  ++   N+  ++   +TMI
Sbjct: 669 AARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMI 728

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +   K  R ++A  +F+ +   G+  +  +Y  ++    K G  E+A  +   ME SGI 
Sbjct: 729 NAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIV 788

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             +   N ++    ++G+  +      ++    +     T S ++ ++S+ G Y+E +++
Sbjct: 789 PGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKL 848

Query: 497 F 497
            
Sbjct: 849 L 849



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 153/321 (47%), Gaps = 23/321 (7%)

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL-L 425
           P   TY+ ++D   +A R D  L +F  +   G+ +D+++ NT+L       R EEA+ +
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 426 VCKEMESSGIRKDAVTYN----ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           +   M   G   +AV+Y+    AL      Q   D ++ M +Q  A   SP+++ YST+I
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGA--CSPDVVAYSTVI 272

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
             +   G   +A  +F E  + G+K DVV Y+ +IDALCK   ++ A  +L +MT +G +
Sbjct: 273 HGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQ 332

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
           P+ VTY+ +I  +      +     + R++ K+    N+   C+     + + GR+  + 
Sbjct: 333 PDTVTYSCMIHGYATLGRLK-EAAKMFREMKKRGLIPNI-VTCNSFLASLCKHGRS-KEA 389

Query: 602 IKVFGQLVAEKAG----------QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
            + F  + A+              G     C  +   ++G+F  M    I  N   F+ +
Sbjct: 390 AEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFAD---MIGLFNSMKSNGIAANCHVFTIL 446

Query: 652 LNACSRCNSFEDASMLLEELR 672
           ++A ++    +DA ++  E++
Sbjct: 447 IHAYAKRGMVDDAMLIFTEMQ 467



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 144/316 (45%), Gaps = 6/316 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ ++      G  + A++ F   V R  + N    + S++I      G +  AK +   
Sbjct: 478 YSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTA--VYSSIIQGFCMHGGLVKAKELVSE 535

Query: 219 ALNEGYGNT-VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKG 276
            +N+G     +  FS++I++  + G   +A  +F+       +P ++T+N++ID  C  G
Sbjct: 536 MINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVG 595

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
            +D     +I D M   GV+PD +T+N+LL    + G       LF EM  +G+  +  T
Sbjct: 596 KMD--KAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVT 653

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y  +L  + +  +   A +   EM     +  V  Y  ++ G  +    D+A+ +F ++ 
Sbjct: 654 YGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLG 713

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
            + +       NT+++   K+ R EEA  +   + +SG+  +  TY  ++    K G  +
Sbjct: 714 TMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVE 773

Query: 457 EVRRMFEQMKADCVSP 472
           +   MF  M+   + P
Sbjct: 774 DANNMFSSMEKSGIVP 789


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 225/484 (46%), Gaps = 73/484 (15%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH-VVEIFDD 289
           F+AL++ + + G   +   +  +M   +++PN+V+YN +++   K  ++  H   E+  D
Sbjct: 13  FNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCK--LERWHEAEELVRD 70

Query: 290 MLRNGVQ--PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD-------------- 333
           M+  G +  PD +T+++LL+   + G  E +R L  E++ RG+  D              
Sbjct: 71  MISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKS 130

Query: 334 ---------------------IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
                                + T+NTL+   C+   +++A  ++ +M A  +  +VVTY
Sbjct: 131 ARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTY 190

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T++DG  KAGRL +A  +   MK  G   D V+Y++ +    K G+  +A  V ++M  
Sbjct: 191 NTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRD 250

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYK 491
           S    + VTYN +L G  K GK D    M EQM  +D    N++ YST++D   K G  +
Sbjct: 251 SHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQ 310

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA  +     +AG + DVV YS+L++ LCK G +E AV  + EM  EG +PN VTY S++
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLV 370

Query: 552 DAF---GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
                 GR A       + ER + +          C                 +  +  L
Sbjct: 371 HGLCSCGRLA-------EAERMVEEMSSGGGGGHHCPPS--------------VSTYNAL 409

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
           +      G+ ++         L  FQ+M      P+ V++S I+   +R      A M+L
Sbjct: 410 IGGLCKAGRIDD--------ALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMIL 461

Query: 669 EELR 672
            E+R
Sbjct: 462 SEVR 465



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 198/406 (48%), Gaps = 7/406 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL  L     W +A +     + R  R        S ++S   + GKV+ ++ + + 
Sbjct: 48  YNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKE 107

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            ++ G       ++ ++++  +S    EA+ +   M R    P L+T+N +I  C +   
Sbjct: 108 VISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREK- 166

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           + +    +   M  +GV+ D +T+N+L+    + G  + A  L   M   G   D+  Y+
Sbjct: 167 NLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYS 226

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           + +  +CK  ++  A +++ +M   +  PNVVTY+T++DG  K+G++D AL M  +M   
Sbjct: 227 SFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS 286

Query: 399 -GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G GL+ V Y+TV+    KLGR +EA  V + M  +G R D VTY++L+ G  K GK +E
Sbjct: 287 DGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEE 346

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF-----KQAGLKADVVLY 512
                 +M  +   PN +TY +L+      G   EA ++  E              V  Y
Sbjct: 347 AVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTY 406

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +ALI  LCK G ++ A+     M  +G  P+ V+Y++I++   RS 
Sbjct: 407 NALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 200/400 (50%), Gaps = 29/400 (7%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M R G  P+ +TFN+L+   S+ G       L   M  R I  ++ +YN LL+ +CK  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 350 MDLAFEIMAEMPAKN--ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
              A E++ +M ++    +P++VTYST++ GY KAG+++++  +  E+   G+  D + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
             V++   K  R  EAL + +EM  +G     +T+N L+ G  ++   +    + ++M A
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             V  +++TY+TL+D   K G  +EA Q+    K +G   DVV YS+ +  LCK+G V  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER-------DLGKQKESANL 580
           A  +L++M      PNVVTYN+I+D   +S   +  ++ +E+        L     S  +
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 581 DAMC----SQDDKDVQEA-----GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
           D +C    +Q+ + V EA      R D   +  +  LV      GK E          + 
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPD---VVTYSSLVNGLCKAGKIEE--------AVE 349

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             ++M     KPN VT+ ++++    C    +A  ++EE+
Sbjct: 350 AVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 166/323 (51%), Gaps = 9/323 (2%)

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
           +  G   T+  F+ LIS   R    + A S+   M    +K ++VTYN ++D   K G  
Sbjct: 144 IRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAG-R 202

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            +   ++ + M  +G  PD + ++S +  +C  G + +A   +  +M     D ++ TYN
Sbjct: 203 LQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDA-HQVLEQMRDSHHDPNVVTYN 261

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKN-ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           T+LD +CK  ++D A E+M +M + +    NVV YST++DG  K GR  +A ++   M  
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   D V+Y+++++   K G+ EEA+   +EM   G + +AVTY +L+ G    G+  E
Sbjct: 322 AGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAE 381

Query: 458 VRRMFEQM-----KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
             RM E+M           P++ TY+ LI    K G   +A++ F+  +  G   D V Y
Sbjct: 382 AERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSY 441

Query: 513 SALIDALCKNGLVESAVSLLDEM 535
           S +++ L ++G    A  +L E+
Sbjct: 442 STIVEGLARSGRALQAEMILSEV 464



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 9/201 (4%)

Query: 203 LGRLGKVDLAKNIFET-ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
           L + GK+D A  + E  A ++G G  V  +S ++    + G  QEA SV  +M R   +P
Sbjct: 267 LCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRP 326

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARN 320
           ++VTY+++++   K G   +  VE   +M   G +P+ +T+ SL+  +CS G L EA R 
Sbjct: 327 DVVTYSSLVNGLCKAG-KIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAER- 384

Query: 321 LFNEMVHRG-----IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +  EM   G         + TYN L+  +CK  ++D A +    M ++   P+ V+YST+
Sbjct: 385 MVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTI 444

Query: 376 IDGYAKAGRLDDALNMFSEMK 396
           ++G A++GR   A  + SE++
Sbjct: 445 VEGLARSGRALQAEMILSEVR 465


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 197/399 (49%), Gaps = 40/399 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+   +LG +D A  +F   L       V+ ++ LI  Y +    Q+   +   M +
Sbjct: 275 NTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVK 334

Query: 257 YNLKPNLVTYNAVIDACGKGG--VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           Y  +PN +TYN ++D+  K G  +D  ++ ++   MLR   +P   TFN ++ +  + G 
Sbjct: 335 YGCEPNFITYNTLMDSLVKSGKYIDAFNLAQM---MLRRDCKPSHFTFNLMIDMFCKVGQ 391

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            + A  LF  M  RG   DI+TYN ++   C+  ++D A +++  M      P+VVTY++
Sbjct: 392 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 451

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++ G  KA ++D+A  ++  ++  G  LD V+ +T++    K  R ++A  + +EME +G
Sbjct: 452 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 511

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID------------ 482
              D V Y  L+ G+ K  + D+    F +M      P ++TYS +ID            
Sbjct: 512 SAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGC 571

Query: 483 ----------------VYS-------KGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
                           VY+       K   Y EA ++++  KQ G    VV Y+ L+D L
Sbjct: 572 MLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKL 631

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           CK   ++ A+ LL+ M  +G  P+ VTYNS+ D F +SA
Sbjct: 632 CKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSA 670



 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 185/361 (51%), Gaps = 1/361 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++  L +  ++  A  I E  +  G    V  ++ LI+ + + G   EA+ +FN M  
Sbjct: 240 TILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLE 299

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            +  P++ TYN +ID   K     +   ++  +M++ G +P+ IT+N+L+    + G + 
Sbjct: 300 NSCSPDVFTYNILIDGYCKQERP-QDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYI 358

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A NL   M+ R      FT+N ++D  CK  Q+DLA+E+   M  +   P++ TY+ MI
Sbjct: 359 DAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMI 418

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G  +A R+DDA  +   M   G   D V+YN+++S   K  + +EA  V + + + G  
Sbjct: 419 SGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYF 478

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VT + L+ G  K  + D+  ++  +M+ +  +P+++ Y+ LI  + K     +++  
Sbjct: 479 LDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAF 538

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F E    G    V+ YS +ID LCK+  V     LL  M + G+ P+ + Y S+ID   +
Sbjct: 539 FSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCK 598

Query: 557 S 557
           S
Sbjct: 599 S 599



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 148/553 (26%), Positives = 264/553 (47%), Gaps = 38/553 (6%)

Query: 193 GKLASAMIS-ILGRLGKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISV 250
           G L  +++  +L +L  +D A   F+    + GY ++ +  + L+SA+ R    QEA  +
Sbjct: 95  GYLVPSVVGRVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDL 154

Query: 251 FNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCS 310
           F + +     P+ +TY+ +I+   K   DF+    + D+M + G+ P    +N+++    
Sbjct: 155 FKNHRCGLCSPDSITYSTLINGFCKAR-DFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLC 213

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
             G  ++A   + +M  R     + TY  L+DA+CK A++  A  I+ +M     +PNVV
Sbjct: 214 DNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVV 272

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TY+T+I+G+ K G +D+A+ +F++M       D  +YN ++  Y K  R ++   + +EM
Sbjct: 273 TYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM 332

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGL 489
              G   + +TYN L+    K GKY +   + + M + DC  P+  T++ +ID++ K G 
Sbjct: 333 VKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC-KPSHFTFNLMIDMFCKVGQ 391

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
              A ++F+     G   D+  Y+ +I   C+   ++ A  LL+ MT+ G  P+VVTYNS
Sbjct: 392 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 451

Query: 550 IIDAFGRSATTE--CTVDDVERDLGKQKE----SANLDAMCSQ---DD--KDVQEAGRTD 598
           I+    +++  +    V +V R+ G   +    S  +D +C     DD  K ++E  R  
Sbjct: 452 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 511

Query: 599 NQIIKVFGQLVAE---KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
           +    V   ++     KA Q  K           L  F +M      P V+T+S +++  
Sbjct: 512 SAPDVVAYTILIHGFCKADQLDKS----------LAFFSEMLDKGCVPTVITYSIVIDKL 561

Query: 656 SRCNSFEDASMLLEELR----LFDNQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSS 710
            +     D  MLL+ +       D  VY  V  GL    + + + +A  L+  +K    +
Sbjct: 562 CKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLC---KSDSYDEAYELYKLMKQTGCA 618

Query: 711 TASAFYNALTDML 723
                YN L D L
Sbjct: 619 PTVVTYNVLVDKL 631



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 204/419 (48%), Gaps = 10/419 (2%)

Query: 144 DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           D+ K     LC  D  T+  L+       ++ +A +      KR    ++   + + +I 
Sbjct: 153 DLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHN--AVYNTIIK 210

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            L   G+VD A  +    +      +V  ++ L+ A  +S    +A  +   M      P
Sbjct: 211 GLCDNGRVDSAL-VHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAP 269

Query: 262 NLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAAR 319
           N+VTYN +I+  C  G +D    V +F+ ML N   PD  T+N L+   C +    + A+
Sbjct: 270 NVVTYNTLINGFCKLGNMD--EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAK 327

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            L  EMV  G + +  TYNTL+D++ K  +   AF +   M  ++  P+  T++ MID +
Sbjct: 328 -LLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMF 386

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K G+LD A  +F  M   G   D  +YN ++S   +  R ++A  + + M  +G   D 
Sbjct: 387 CKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDV 446

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           VTYN+++ G  K  + DE   ++E ++      +++T STLID   K     +A ++ RE
Sbjct: 447 VTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLRE 506

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            ++ G   DVV Y+ LI   CK   ++ +++   EM  +G  P V+TY+ +ID   +SA
Sbjct: 507 MERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 565



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 177/383 (46%), Gaps = 18/383 (4%)

Query: 185 REERKNDQGKLASAMISI---------------LGRLGKVDLAKNIFETALNEGYGNTVY 229
           ++ER  D  KL   M+                 L + GK   A N+ +  L      + +
Sbjct: 318 KQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHF 377

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID-ACGKGGVDFKHVVEIFD 288
            F+ +I  + + G    A  +F  M      P++ TYN +I  AC    +D     ++ +
Sbjct: 378 TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID--DARQLLE 435

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M   G  PD +T+NS+++   +    + A  ++  + + G   D+ T +TL+D +CK  
Sbjct: 436 RMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR 495

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++D A +++ EM     +P+VV Y+ +I G+ KA +LD +L  FSEM   G     ++Y+
Sbjct: 496 RLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYS 555

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            V+    K  R  +  ++ K M   G+  DA+ Y +++ G  K   YDE   +++ MK  
Sbjct: 556 IVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQT 615

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
             +P ++TY+ L+D   K     EA+ +    +  G   D V Y+++ D   K+   + A
Sbjct: 616 GCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKA 675

Query: 529 VSLLDEMTKEGIRPNVVTYNSII 551
             L   M   G  P    Y+ ++
Sbjct: 676 FRLFQAMKSRGCSPTPFMYSLLL 698



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 178/382 (46%), Gaps = 5/382 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   G++  A       ++R+ + +      + MI +  ++G++DLA  +F+ 
Sbjct: 344 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFT--FNLMIDMFCKVGQLDLAYELFQL 401

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
             + G    +Y ++ +IS   R+    +A  +   M      P++VTYN+++   C    
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 461

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           VD     E+++ +   G   D +T ++L+    +    + A  L  EM   G   D+  Y
Sbjct: 462 VD--EAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAY 519

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             L+   CK  Q+D +    +EM  K   P V+TYS +ID   K+ R+ D   +   M  
Sbjct: 520 TILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLE 579

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  D + Y +V+    K   ++EA  + K M+ +G     VTYN L+    K  + DE
Sbjct: 580 RGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDE 639

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              + E M++D   P+ +TY+++ D + K   + +A ++F+  K  G      +YS L+ 
Sbjct: 640 AIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLT 699

Query: 518 ALCKNGLVESAVSLLDEMTKEG 539
            L     ++ A+ + +E  + G
Sbjct: 700 KLVAEEKMDQAMEIWEEALEAG 721



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/335 (22%), Positives = 146/335 (43%), Gaps = 39/335 (11%)

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G +    T N LL  + ++ K  E   +F+  +    SP+ +TYSTLI+ + K   +++A
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            ++  E ++ G+     +Y+ +I  LC NG V+SA+    +M +    P+V+TY  ++DA
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NCAPSVITYTILVDA 245

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
             +SA     + D    L                 +D+ EAG   N +   +  L+    
Sbjct: 246 LCKSAR----ISDASLIL-----------------EDMIEAGCAPNVV--TYNTLINGFC 282

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
             G  +          + +F +M +    P+V T++ +++   +    +D + LL+E+  
Sbjct: 283 KLGNMDE--------AVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVK 334

Query: 674 FDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRG 731
           +  +   + +  LM    +   ++ A +L   +   D   +   +N + DM    GQ   
Sbjct: 335 YGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDL 394

Query: 732 AQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARA 766
           A  +      R    ++++      ++M SGA RA
Sbjct: 395 AYELFQLMTDRGCLPDIYT-----YNIMISGACRA 424


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 184/355 (51%), Gaps = 3/355 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+++ L R G +     + +  L +G+   VY +++LIS   + G   EA+ + + M  
Sbjct: 306 NALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVS 365

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            + +PN VTYN +I   C +  V+     E+   +   GV PD  TFNSL+         
Sbjct: 366 RDCEPNTVTYNTLIGTLCKENHVE--AATELARVLTSKGVLPDVCTFNSLIQGLCLTSNR 423

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  LF EM  +G D D FTY+ L++++C   ++  A  ++ EM     + NVV Y+T+
Sbjct: 424 EIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTL 483

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K  R+ DA ++F +M+ LG+    V+YNT+++   K  R EEA  +  +M   G+
Sbjct: 484 IDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGL 543

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D  TY  +L  + +QG       + + M  +   P+++TY TLI    K G    A +
Sbjct: 544 KPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASK 603

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           + R  +  G+      Y+ +I ALCK    + A+ L  EM ++G  P+V+TY  +
Sbjct: 604 LLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIV 658



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 189/368 (51%), Gaps = 7/368 (1%)

Query: 196 ASAMISILGRLGKVDLA-KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
            + +++ L + G+++ A + I+E    EG+      F+AL++   R+G+ ++ + + + M
Sbjct: 272 VNVLVNGLCKEGRIEEALRFIYE---EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFM 328

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
                + ++ TYN++I   C  G +D    VEI   M+    +P+ +T+N+L+    +  
Sbjct: 329 LEKGFELDVYTYNSLISGLCKLGEID--EAVEILHHMVSRDCEPNTVTYNTLIGTLCKEN 386

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             EAA  L   +  +G+  D+ T+N+L+  +C  +  ++A E+  EM  K   P+  TYS
Sbjct: 387 HVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYS 446

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I+      RL +AL +  EM+  G   + V YNT++    K  R  +A  +  +ME  
Sbjct: 447 ILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEML 506

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G+ + +VTYN L+ G  K  + +E  ++ +QM  + + P+  TY+T++  + + G  K A
Sbjct: 507 GVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRA 566

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             I +     G + D+V Y  LI  LCK G V+ A  LL  +  +G+      YN +I A
Sbjct: 567 ADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQA 626

Query: 554 FGRSATTE 561
             +   T+
Sbjct: 627 LCKRKRTK 634



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 182/350 (52%), Gaps = 3/350 (0%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           V+ A  I E  +  G   T  + + L++   + G  +EA+      + +   P+ VT+NA
Sbjct: 250 VEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFC--PDQVTFNA 307

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           +++   + G   K  +E+ D ML  G + D  T+NSL++   + G  + A  + + MV R
Sbjct: 308 LVNGLCRTG-HIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSR 366

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
             + +  TYNTL+  +CK   ++ A E+   + +K + P+V T++++I G       + A
Sbjct: 367 DCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIA 426

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           + +F EMK  G   D  +Y+ ++       R +EAL++ KEME SG  ++ V YN L+ G
Sbjct: 427 MELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDG 486

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             K  +  +   +F+QM+   VS + +TY+TLI+   K    +EA Q+  +    GLK D
Sbjct: 487 LCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPD 546

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
              Y+ ++   C+ G ++ A  ++  MT  G  P++VTY ++I    ++ 
Sbjct: 547 KFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAG 596



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 225/498 (45%), Gaps = 50/498 (10%)

Query: 181 FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           FAVK + R        +  +S+L +  K+ L + +    + +     V  F+ LI A  +
Sbjct: 158 FAVKPDTR------FYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCK 211

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
           +   + AI +   M  Y L+P+  T+  ++    +   D +  + I + M+ +G +   +
Sbjct: 212 AHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEA-DVEGALRIKELMVESGCELTSV 270

Query: 301 TFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           + N L+  +C  G + EA R ++ E    G   D  T+N L++ +C+   +    E+M  
Sbjct: 271 SVNVLVNGLCKEGRIEEALRFIYEE---EGFCPDQVTFNALVNGLCRTGHIKQGLEMMDF 327

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M  K    +V TY+++I G  K G +D+A+ +   M       + V+YNT++    K   
Sbjct: 328 MLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENH 387

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            E A  + + + S G+  D  T+N+L+ G       +    +FE+MK     P+  TYS 
Sbjct: 388 VEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSI 447

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LI+        KEA+ + +E + +G   +VV+Y+ LID LCKN  V  A  + D+M   G
Sbjct: 448 LIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLG 507

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD- 598
           +  + VTYN++I+   +S   E              E+A L       D+ + E  + D 
Sbjct: 508 VSRSSVTYNTLINGLCKSKRVE--------------EAAQLM------DQMIMEGLKPDK 547

Query: 599 ---NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
                ++K F Q       QG        +I     + Q M     +P++VT+  ++   
Sbjct: 548 FTYTTMLKYFCQ-------QG--------DIKRAADIVQNMTLNGCEPDIVTYGTLIGGL 592

Query: 656 SRCNSFEDASMLLEELRL 673
            +    + AS LL  +++
Sbjct: 593 CKAGRVDVASKLLRSVQM 610



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 116/494 (23%), Positives = 222/494 (44%), Gaps = 34/494 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFE-TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           S ++ +L R      A ++F+  +    Y      F  L+    R+G     +++   M 
Sbjct: 60  SQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMH 119

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGL 314
              +  +  T+   ++           +  +F  M R+  V+PD   +N  L++  +   
Sbjct: 120 SSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANK 179

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +    L ++MV   +  D+ T+N L+ A+CK  Q+  A  ++ +MP   + P+  T++T
Sbjct: 180 LKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTT 239

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++ G+ +   ++ AL +   M   G  L  VS N +++   K GR EEAL    E E  G
Sbjct: 240 LMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEE--G 297

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D VT+NAL+ G  + G   +   M + M       ++ TY++LI    K G   EA+
Sbjct: 298 FCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAV 357

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +I         + + V Y+ LI  LCK   VE+A  L   +T +G+ P+V T+NS+I   
Sbjct: 358 EILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGL 417

Query: 555 GRSATTECTVDDVER------DLGKQKESANLDAMCSQDD--------KDVQEAGRTDNQ 600
             ++  E  ++  E       D  +   S  ++++CS+          K+++ +G   N 
Sbjct: 418 CLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARN- 476

Query: 601 IIKVFGQLV---AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
            + V+  L+    +    G  E+           +F +M  L +  + VT++ ++N   +
Sbjct: 477 -VVVYNTLIDGLCKNNRVGDAED-----------IFDQMEMLGVSRSSVTYNTLINGLCK 524

Query: 658 CNSFEDASMLLEEL 671
               E+A+ L++++
Sbjct: 525 SKRVEEAAQLMDQM 538



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 121/522 (23%), Positives = 234/522 (44%), Gaps = 47/522 (9%)

Query: 229 YAFSALISAYGRSGYCQEAISVF---NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
           ++ S L+    R      A+S+F   ++   Y+  P++  ++ ++    + G  F  ++ 
Sbjct: 57  FSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSV--FHELLRQLARAG-SFDSMLT 113

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR--GIDQDIFTYNTLLDA 343
           +   M  + +  D  TF   L   +      A  N    ++ R   +  D   YN  L  
Sbjct: 114 LLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSL 173

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           + K  ++ L   + ++M A  + P+V T++ +I    KA +L  A+ M  +M   G+  D
Sbjct: 174 LVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPD 233

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             ++ T++  + +    E AL + + M  SG    +V+ N L+ G  K+G+ +E  R   
Sbjct: 234 EKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIY 293

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           + +  C  P+ +T++ L++   + G  K+ +++     + G + DV  Y++LI  LCK G
Sbjct: 294 EEEGFC--PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLG 351

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
            ++ AV +L  M      PN VTYN++I    +    E   + + R L  +     L  +
Sbjct: 352 EIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATE-LARVLTSK---GVLPDV 407

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
           C            T N +I+          G     NR   EI   + +F++M +    P
Sbjct: 408 C------------TFNSLIQ----------GLCLTSNR---EI--AMELFEEMKEKGCDP 440

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLF 701
           +  T+S ++ +       ++A MLL+E+ L       V +  L+    ++N    A  +F
Sbjct: 441 DEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIF 500

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQ-KRGAQL---VVLEG 739
           D+++++  S +S  YN L + L    + +  AQL   +++EG
Sbjct: 501 DQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEG 542



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/228 (19%), Positives = 96/228 (42%), Gaps = 37/228 (16%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L +  +V+ A  + +  + EG     + ++ ++  + + G  + A  +  +M  
Sbjct: 516 NTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTL 575

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDF---------------------------------KH 282
              +P++VTY  +I   C  G VD                                  K 
Sbjct: 576 NGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKE 635

Query: 283 VVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            + +F +M+  G  PD IT+  +   +C+ GG  + A +   EM+ +GI  +  ++  L 
Sbjct: 636 AMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLA 695

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           + +C  +  D   +++  +  K       + +++I G+ K  + +DAL
Sbjct: 696 EGLCSLSMEDTLIQLINMVMEKGRFSQ--SETSIIRGFLKIQKFNDAL 741


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 180/348 (51%), Gaps = 1/348 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK + A  IF+T  ++      Y +++ IS   +    +EA  V   +    L PN VTY
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTY 325

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           NA+ID C   G D        D+M+  G+     T+N L+         E A ++  EM 
Sbjct: 326 NALIDGCCNKG-DLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMR 384

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +G++ D+ TYN  ++  C+      A  +  EM  KNI P V TY+++ID + K  R+ 
Sbjct: 385 EKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMS 444

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A   F +    G+  D + +N ++  +   G  + A  + KEM+++ +  D VT+N L+
Sbjct: 445 EAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLM 504

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GY ++ K +E +++ ++MK   + P+ ++Y+TLI  YSK G  K+A+++F E    G  
Sbjct: 505 QGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFD 564

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             ++ Y+ALI    K G  + A  LL EM  +GI P+  TY  +I+A 
Sbjct: 565 PTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 215/424 (50%), Gaps = 34/424 (8%)

Query: 250 VFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AV 308
           V+  M + N+K ++VT+N +I+   + G  +K   +    M   GV+P+ +T+N+++   
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREG-KWKKAKDFIGHMEVYGVKPNVVTYNTVINGY 262

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
           C RG  +EAA  +F  M  + +  D +TYN+ +  +CK  +++ A  ++ ++    + PN
Sbjct: 263 CLRGK-FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPN 321

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
            VTY+ +IDG    G LD A     EM   GI     +YN ++       R EEA  + K
Sbjct: 322 AVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIK 381

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
           EM   G+  D VTYN  + GY + G   +   +F++M    + P + TY++LIDV+ K  
Sbjct: 382 EMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRN 441

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
              EA + F++  + G+  D+++++ALID  C NG ++ A  LL EM    + P+ VT+N
Sbjct: 442 RMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFN 501

Query: 549 SIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
           +++  + R           ER + + K+   LD M        +E G   + I   +  L
Sbjct: 502 TLMQGYCR-----------ERKVEEAKKL--LDEM--------KERGIKPDHI--SYNTL 538

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
           ++  + +G  ++         L VF +M  L   P ++T++A++   S+    + A  LL
Sbjct: 539 ISGYSKRGDMKDA--------LEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELL 590

Query: 669 EELR 672
            E++
Sbjct: 591 REMQ 594



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 182/349 (52%), Gaps = 3/349 (0%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           + +A  ++E  +     +++  F+ +I+   R G  ++A      M+ Y +KPN+VTYN 
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNT 257

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           VI+  C +G   F+   +IF  M    ++PD  T+NS ++   +    E A  +  +++ 
Sbjct: 258 VINGYCLRGK--FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLE 315

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G+  +  TYN L+D  C    +D AF    EM  + I  +V TY+ +I       R+++
Sbjct: 316 SGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEE 375

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A +M  EM+  G+  D V+YN  ++ Y + G  ++AL +  EM    IR    TY +L+ 
Sbjct: 376 AEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLID 435

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
            +GK+ +  E    F++   + + P+++ ++ LID +   G    A Q+ +E   A +  
Sbjct: 436 VFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVP 495

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           D V ++ L+   C+   VE A  LLDEM + GI+P+ ++YN++I  + +
Sbjct: 496 DEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSK 544



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 242/503 (48%), Gaps = 43/503 (8%)

Query: 250 VFNSM----KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           +FN +     R N+K  LV ++ ++ A C     D    +E  + M  N + P   T NS
Sbjct: 131 IFNELSLARNRLNVKTTLV-FDLLLSAYCQFRKPD--EALECLNLMKENEIIPKTETCNS 187

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           LL++  +    + A  ++ EMV   I   I T+N +++ +C+  +   A + +  M    
Sbjct: 188 LLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYG 247

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           + PNVVTY+T+I+GY   G+ + A  +F  MK   +  D  +YN+ +S   K  R EEA 
Sbjct: 248 VKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEAS 307

Query: 425 -LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
            ++CK +E SG+  +AVTYNAL+ G   +G  D+     ++M    +  ++ TY+ LI  
Sbjct: 308 GVLCKLLE-SGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHA 366

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
                  +EA  + +E ++ G++ DVV Y+  I+  C+ G  + A+SL DEM ++ IRP 
Sbjct: 367 LFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPT 426

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           V TY S+ID FG+            R+   + E         +  K ++E    D   I 
Sbjct: 427 VETYTSLIDVFGK------------RNRMSEAE--------EKFKKSIKEGMLPD---II 463

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           +F  L+      G  + R  Q       + ++M   K+ P+ VTF+ ++    R    E+
Sbjct: 464 MFNALIDGHCVNGNID-RAFQ-------LLKEMDNAKVVPDEVTFNTLMQGYCRERKVEE 515

Query: 664 ASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
           A  LL+E++    +   +++  L+ GY +      AL +FDE+  +        YNAL  
Sbjct: 516 AKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQ 575

Query: 722 MLWHFGQKRGAQLVVLEGKRRQV 744
                G+   A+ ++ E + + +
Sbjct: 576 GYSKIGEADHAEELLREMQSKGI 598


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 198/351 (56%), Gaps = 8/351 (2%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKRYNLKP 261
           L R+GKVD A    +  LN+        F+ LI+ Y +SG   EA + +++ M +   +P
Sbjct: 323 LCRVGKVDEA----QVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRP 378

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARN 320
           ++ T+N +I    K G+     V++ +DM  NG  P+ IT+ +LL   C +  L EA   
Sbjct: 379 DVFTFNTLIHGLCKKGL-MGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGY- 436

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           + NEM  +G + +I  YN LL A+CK  ++  A +++ EM  K   P++ T++T+I G  
Sbjct: 437 VLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLC 496

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K  R +DAL ++ +M   G+  + V+YNT++  + + G  +EAL +  +M   G   D +
Sbjct: 497 KVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEI 556

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TYN L+  + K G  ++   +F++M    + P+ ++ + LI+   + G    A+++ R+ 
Sbjct: 557 TYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDM 616

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
              GL  DVV Y++LI+ LCK G +  A +L +++  EGI+P+ +TYN++I
Sbjct: 617 IHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLI 667



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 234/523 (44%), Gaps = 73/523 (13%)

Query: 156 ADDYTFLLRELGNRGEWSKAI--QCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK 213
            D+   LLR++   G    ++  Q    A+ + +R N+  KL   M  ++G L  VD   
Sbjct: 224 VDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMF-LMGCLPDVD--- 279

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA- 272
                            F+ +I    R     E   + + M      PN +TY  +++  
Sbjct: 280 ----------------TFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGL 323

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGID 331
           C  G VD   V      +L     P+ + F  L+      G L EA   L+++M+  G  
Sbjct: 324 CRVGKVDEAQV------LLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCR 377

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D+FT+NTL+  +CK   M  A +++ +M A   +PN++TY+T++DG+ K  +L++A  +
Sbjct: 378 PDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYV 437

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
            +EM   G  L+ + YN +L    K G+  +AL +  EM   G + D  T+N L+ G  K
Sbjct: 438 LNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCK 497

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
             + ++   ++  M  D V  N +TY+TLI  + +GG  +EA+++  +    G   D + 
Sbjct: 498 VDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEIT 557

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT----ECTVDDV 567
           Y+ LI A CK G  E A+ L DEM ++ + P+ ++ N +I+   R        E   D +
Sbjct: 558 YNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMI 617

Query: 568 ERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
            R L     + N  ++ +C     +++EA                               
Sbjct: 618 HRGLAPDVVTYNSLINGLCKMG--NIREA------------------------------- 644

Query: 626 ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
                 +F K+    I+P+ +T++ ++    R   F+DA +LL
Sbjct: 645 ----FNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLL 683



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 241/520 (46%), Gaps = 51/520 (9%)

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           +A N+F   L++G   TVY F  ++ A         A S+   M ++   PN V Y  +I
Sbjct: 191 VAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLI 250

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRG 329
            A  K        +++ ++M   G  PD  TFN ++  +C    + E A+ L + M+ RG
Sbjct: 251 HALSKRD-RVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAK-LVDRMLFRG 308

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
              +  TY  L++ +C+  ++D A  ++ ++P    +PN V ++ +I+GY K+GRLD+A 
Sbjct: 309 FTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDVHFTILINGYVKSGRLDEA- 363

Query: 390 NMFSEMKFLGIGL--DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           N F   K +  G   D  ++NT++    K G    A+ +  +M ++G   + +TY  LL 
Sbjct: 364 NAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLD 423

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           G+ K+ + +E   +  +M A     N++ Y+ L+    K G   +A+ +  E    G K 
Sbjct: 424 GFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKP 483

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           D+  ++ LI  LCK    E A++L  +M  +G+  N VTYN++I AF R    +  +  V
Sbjct: 484 DIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLV 543

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI- 626
              L +          C  D+        T N +IK F +L A +   G  +   R+++ 
Sbjct: 544 NDMLFRG---------CPLDEI-------TYNGLIKAFCKLGATEKALGLFDEMVRKDLV 587

Query: 627 ------------LCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
                       LC +G       + + M    + P+VVT+++++N   +  +  +A  L
Sbjct: 588 PSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNL 647

Query: 668 LEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLM 707
             +L+    Q   + +  L+      W     +FD+  L+
Sbjct: 648 FNKLQAEGIQPDAITYNTLI-----CWHCRAGMFDDAYLL 682



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 177/357 (49%), Gaps = 4/357 (1%)

Query: 207 GKVDLAKN-IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           G++D A   +++  +  G    V+ F+ LI    + G    A+ + N M      PNL+T
Sbjct: 358 GRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLIT 417

Query: 266 YNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           Y  ++D  C K     +    + ++M   G + + + +N LL    + G    A ++  E
Sbjct: 418 YTTLLDGFCKKN--QLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGE 475

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M  +G   DIFT+NTL+  +CK  + + A  +  +M    +  N VTY+T+I  + + G 
Sbjct: 476 MSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGA 535

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           + +AL + ++M F G  LD ++YN ++  + KLG  E+AL +  EM    +    ++ N 
Sbjct: 536 IQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNL 595

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G  + GK      +   M    ++P+++TY++LI+   K G  +EA  +F + +  G
Sbjct: 596 LINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEG 655

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           ++ D + Y+ LI   C+ G+ + A  LL    +    PN VT+  ++  F +    E
Sbjct: 656 IQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKE 712



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 210/452 (46%), Gaps = 35/452 (7%)

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +P   ++N +L +         A N+F EM+ +G+   ++T+  ++ A+C   ++D A  
Sbjct: 170 EPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACS 229

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++ +M      PN V Y T+I   +K  R+++AL +  EM  +G   D  ++N V+    
Sbjct: 230 LLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLC 289

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           +L R  E   +   M   G   + +TY  L+ G  + GK DE + +  ++     +PN +
Sbjct: 290 RLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDV 345

Query: 476 TYSTLIDVYSKGGLYKEAMQ-IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
            ++ LI+ Y K G   EA   ++ +  + G + DV  ++ LI  LCK GL+ SAV ++++
Sbjct: 346 HFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVND 405

Query: 535 MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQD 587
           M+  G  PN++TY +++D F +    E     V  ++  +    N       L A+C   
Sbjct: 406 MSANGCTPNLITYTTLLDGFCKKNQLE-EAGYVLNEMSAKGFELNIMGYNVLLRALCKNG 464

Query: 588 D--KDVQEAGRTDNQIIK----VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
              K +   G   ++  K     F  L+       +KE+         L +++ M    +
Sbjct: 465 KVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDA--------LALYRDMLLDGV 516

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELRL----FDNQVYGVAHGLLMGY-RDNIWVQ 696
             N VT++ +++A  R  + ++A  L+ ++       D   Y   +GL+  + +     +
Sbjct: 517 IANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITY---NGLIKAFCKLGATEK 573

Query: 697 ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           AL LFDE+   D   ++   N L + L   G+
Sbjct: 574 ALGLFDEMVRKDLVPSNISCNLLINGLCRVGK 605



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 147/257 (57%), Gaps = 3/257 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++  L + GKV  A ++     ++G    ++ F+ LI    +    ++A++++  M  
Sbjct: 454 NVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLL 513

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +  N VTYN +I A  +GG   +  +++ +DML  G   D IT+N L+    + G  E
Sbjct: 514 DGVIANTVTYNTLIHAFLRGGA-IQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATE 572

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF+EMV + +     + N L++ +C+  ++  A E++ +M  + ++P+VVTY+++I
Sbjct: 573 KALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLI 632

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA-LLVCKEMESSGI 435
           +G  K G + +A N+F++++  GI  D ++YNT++  + + G F++A LL+ + +E++ I
Sbjct: 633 NGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFI 692

Query: 436 RKDAVTYNALLGGYGKQ 452
             D VT+  L+  + K+
Sbjct: 693 PND-VTWYILVSNFIKE 708



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/383 (21%), Positives = 149/383 (38%), Gaps = 46/383 (12%)

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            Y+ L+D +    +  +  +++ ++  + I+     +  ++  Y +A     A  M  +M
Sbjct: 104 VYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDM 163

Query: 396 KFLGIGLDRV-SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           K +        SYN VL I         A  V  EM S G+     T+  ++       +
Sbjct: 164 KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNE 223

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            D    +   M      PN + Y TLI   SK     EA+++  E    G   DV  ++ 
Sbjct: 224 VDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFND 283

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           +I  LC+   +     L+D M   G  PN +TY  +++   R       VD+ +  L K 
Sbjct: 284 VIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGK----VDEAQVLLNKV 339

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI-------- 626
                 D   +       ++GR D     ++ +++         +N CR ++        
Sbjct: 340 PTPN--DVHFTILINGYVKSGRLDEANAFLYDKMI---------KNGCRPDVFTFNTLIH 388

Query: 627 -LCILGVF-------QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
            LC  G+          M      PN++T++ +L+   + N  E+A  +L E+       
Sbjct: 389 GLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMS------ 442

Query: 679 YGVAHGL---LMGYRDNIWVQAL 698
              A G    +MGY  N+ ++AL
Sbjct: 443 ---AKGFELNIMGY--NVLLRAL 460


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 198/373 (53%), Gaps = 4/373 (1%)

Query: 179 FAFAVKREERK-NDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALI 235
           FAF+V  +  K   Q   AS   +I  L   G++  A ++F+  + EG+   V  ++ LI
Sbjct: 127 FAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLI 186

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV 295
           +   ++G+   AI +  SM++ N +P++V Y  +I +  K          +F +M+  G+
Sbjct: 187 NGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQ-TQAFNLFSEMITKGI 245

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
            P+ +T NSL+      G W+    L NEMV   I  +  +  T++DA+CK   +  A +
Sbjct: 246 SPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHD 305

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++  M    + P+VVTY+ +IDG+     +D+A+ +F  M   G   +  SYNT+++ Y 
Sbjct: 306 VVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYC 365

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K+ R ++A+ + +EM    +  + VTYN L+ G    G+  +   +F +M A    P+L+
Sbjct: 366 KIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLV 425

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY  L+D   K     +AM + +  + + L  D+ +Y+ +ID +C+ G +E A  L   +
Sbjct: 426 TYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNL 485

Query: 536 TKEGIRPNVVTYN 548
           + +G++PNV TYN
Sbjct: 486 SSKGLKPNVWTYN 498



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 165/327 (50%), Gaps = 5/327 (1%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
           ++  F+ ++++  +       +S+   M  + +  N+ T N +I++ C    V+F     
Sbjct: 73  SIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNF--AFS 130

Query: 286 IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +   +L+ G QPD  +F +L+  +C  G + EA  +LF++M+  G   D+  Y TL++ +
Sbjct: 131 VLAKILKLGCQPDTASFTTLIKGLCLEGQIGEAL-HLFDKMIWEGFQPDVVIYATLINGL 189

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK      A  ++  M   N  P+VV Y T+I    K  +   A N+FSEM   GI  + 
Sbjct: 190 CKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNI 249

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V+ N+++     LG ++    +  EM  S I  +A++   ++    K+G   +   + + 
Sbjct: 250 VTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDM 309

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    V P+++TY+ LID +       EA+++F      G   +V  Y+ LI+  CK   
Sbjct: 310 MFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIER 369

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSII 551
           ++ A+ L +EM ++ + PN VTYN++I
Sbjct: 370 MDKAMYLFEEMCRQKLIPNTVTYNTLI 396



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/473 (21%), Positives = 208/473 (43%), Gaps = 47/473 (9%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F+ ML     P  + F  +L   ++   +    +L  +M   GI  +++T N L+++ C 
Sbjct: 62  FNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCH 121

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +++ AF ++A++      P+  +++T+I G    G++ +AL++F +M + G   D V 
Sbjct: 122 LNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVI 181

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T+++   K G    A+ + + ME    + D V Y  L+    K  +  +   +F +M 
Sbjct: 182 YATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMI 241

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              +SPN++T ++L+      G +K    +  E   + +  + +  + ++DALCK G+V 
Sbjct: 242 TKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVA 301

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A  ++D M + G+ P+VVTY ++ID                               C +
Sbjct: 302 QAHDVVDMMFQSGVEPDVVTYTALIDGH-----------------------------CLR 332

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK------KENRCRQEIL-CILGVFQKMHKL 639
            + D         + +KVF  +V +                C+ E +   + +F++M + 
Sbjct: 333 SEMD---------EAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQ 383

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQA 697
           K+ PN VT++ +++        +DA  L  E+         V + +L+ Y  ++    +A
Sbjct: 384 KLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKA 443

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
           ++L   ++  +       Y  + D +   G+   A+ +      + +  NVW+
Sbjct: 444 MALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWT 496



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/418 (23%), Positives = 189/418 (45%), Gaps = 10/418 (2%)

Query: 145 ILKKFEFKLCGADD--YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +L+  E   C  D   Y  L+  L    + ++A   F+  + +    N      ++++  
Sbjct: 201 LLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT--CNSLVYA 258

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L  LG+      +    ++        + + ++ A  + G   +A  V + M +  ++P+
Sbjct: 259 LCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPD 318

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +VTY A+ID  C +  +D    V++FD M+  G  P+  ++N+L+    +    + A  L
Sbjct: 319 VVTYTALIDGHCLRSEMD--EAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYL 376

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F EM  + +  +  TYNTL+  +C   ++  A  +  EM A    P++VTY  ++D   K
Sbjct: 377 FEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCK 436

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
              LD A+ +   ++   +  D   Y  V+    + G  E+A  +   + S G++ +  T
Sbjct: 437 NCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWT 496

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN +  G  K+G  DE  ++F +M  +  S +  TY+T+   + +      A+Q+  E  
Sbjct: 497 YNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEML 556

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEM---TKEGIRPNVVTYNSIIDAFGR 556
             G   DV   + L+  L  +GL +S    L++M    +  ++  V      I+A G+
Sbjct: 557 ARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRIQVKDTVFCKEDDINALGK 614


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 192/355 (54%), Gaps = 1/355 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++S L + GK+  A  +++  L++G   T  +++++I  + R G    A SVF+ M  
Sbjct: 457 NSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLD 516

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             LKPN++TY+ ++D   K G D ++   +FD M+   + P   T+N  +    + G   
Sbjct: 517 CGLKPNVITYSILMDGYFKNG-DTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTS 575

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A+++  + V +G      TYN+++D   K   +  A     EM    +SPNV+TY+T+I
Sbjct: 576 EAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLI 635

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G+ K    D AL M +EM+  G+ LD  +Y  ++  + K    E A  +  E+   G+ 
Sbjct: 636 NGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLS 695

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            ++V YN+L+ GY      +    + ++M  + +S +L TY+TLID   K G    A+ +
Sbjct: 696 PNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDL 755

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           + E    G+  D+++Y+ LI+ LC  G +E+A  +L EM ++ I PNV  YN++I
Sbjct: 756 YSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALI 810



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 199/401 (49%), Gaps = 15/401 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS----ILG--RLGKVDLA 212
           Y  LL  L   G+ S+A   +       ++  D+G LA   +S    ILG  R G +D+A
Sbjct: 456 YNSLLSWLCKEGKMSEATTLW-------QKMLDKG-LAPTKVSYNSMILGHCRQGNLDMA 507

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
            ++F   L+ G    V  +S L+  Y ++G  + A  VF+ M   N+ P+  TYN  I+ 
Sbjct: 508 ASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKING 567

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
             K G       ++    +  G  P  +T+NS++    + G   +A   + EM   G+  
Sbjct: 568 LCKVGRT-SEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSP 626

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           ++ TY TL++  CK    DLA ++  EM  K +  ++  Y  +IDG+ K   ++ A  +F
Sbjct: 627 NVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLF 686

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           SE+   G+  + V YN+++S Y  L   E AL + K M   GI  D  TY  L+ G  K+
Sbjct: 687 SELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKE 746

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G+      ++ +M A  + P+++ Y+ LI+     G  + A +I  E ++  +  +V +Y
Sbjct: 747 GRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIY 806

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           +ALI    K G ++ A  L +EM  +G+ PN  TY+ +I+ 
Sbjct: 807 NALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILING 847



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 222/482 (46%), Gaps = 62/482 (12%)

Query: 242 GYCQE-----AISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQ 296
           GYC++     A+  F+ M      PN VTY  +I+ C K G +     +++  M    + 
Sbjct: 358 GYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNG-NMAKAYDLYTQMKNKNIC 416

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           P     NSL+    +    E A  LF+E V   I  +IFTYN+LL  +CK  +M  A  +
Sbjct: 417 PTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTL 475

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY-- 414
             +M  K ++P  V+Y++MI G+ + G LD A ++FS+M   G+  + ++Y+ ++  Y  
Sbjct: 476 WQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFK 535

Query: 415 ---------------------------------AKLGRFEEALLVCKEMESSGIRKDAVT 441
                                             K+GR  EA  + K+    G     +T
Sbjct: 536 NGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLT 595

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN+++ G+ K+G        + +M    VSPN++TY+TLI+ + K      A+++  E +
Sbjct: 596 YNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMR 655

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             GL+ D+  Y ALID  CK   +E+A  L  E+   G+ PN V YNS+I  +      E
Sbjct: 656 NKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNME 715

Query: 562 CTVDDVERDLGK------QKESANLDAMCSQD------DKDVQEAGRTDNQIIKVFGQLV 609
             ++  +R LG+      Q  +  +D +  +       D   + + +     I ++  L+
Sbjct: 716 AALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLI 775

Query: 610 AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
               G+G+ EN   Q+IL       +M +  I PNV  ++A++    +  + ++A  L  
Sbjct: 776 NGLCGKGQLEN--AQKILA------EMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHN 827

Query: 670 EL 671
           E+
Sbjct: 828 EM 829



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 192/811 (23%), Positives = 332/811 (40%), Gaps = 94/811 (11%)

Query: 1   MASTPPHCSITATKPYQNHQYPHNHLKNNHHRQSHHPSSRPHWTSHKVSLTKPPLSPSPR 60
           + S P   +   +  YQN  YP+      + + S+   +     S +V LTKP    S  
Sbjct: 24  LCSQPQFPNEPQSSLYQN-SYPNFSYAEKNSQDSNFSENLIFLKSRQVELTKPASQDSV- 81

Query: 61  NAPKPAATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTR-FVSKMHFGRPKIAMST 119
              +     T ++    P+ +L+            F     TR FV  +      + + T
Sbjct: 82  -LARTNVIDTLLSYKRDPYSALTY-----------FKQLECTRGFVRSLDSLCVLLHILT 129

Query: 120 RHSVVAEEALHHVTAFARDDVS-LGDIL--------KKFEFKLCGADDYTFLLRELGNRG 170
           R S   ++A + +  F   D   + +IL        K+F+F       Y +LL       
Sbjct: 130 RSSETLKQAQNLLNRFISGDSGPMPNILVDHFIGSTKRFDFD-SDIRIYNYLLNSYIKAN 188

Query: 171 EWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYA 230
           + + AI CF   V  E       K  + +++ L +   +  A+ ++E  + +G     + 
Sbjct: 189 KLNDAIGCFNRLV--ESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFT 246

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
              ++ A  +    +EA   F   K   +K +   Y+ VI A  K  +D +    +  DM
Sbjct: 247 VHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCK-NLDVELACGLLKDM 305

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
              G  P   TF S++  C + G    A  L +EMV  G+  ++    TL+   CK  ++
Sbjct: 306 RDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKL 365

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK--------FLGIGL 402
             A E   +M     SPN VTY+ +I+   K G +  A +++++MK        F+   L
Sbjct: 366 VSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSL 425

Query: 403 DR--------------------------VSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            R                           +YN++LS   K G+  EA  + ++M   G+ 
Sbjct: 426 IRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLA 485

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC-VSPNLLTYSTLIDVYSKGGLYKEAMQ 495
              V+YN+++ G+ +QG  D    +F  M  DC + PN++TYS L+D Y K G  + A  
Sbjct: 486 PTKVSYNSMILGHCRQGNLDMAASVFSDM-LDCGLKPNVITYSILMDGYFKNGDTEYAFY 544

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F       +      Y+  I+ LCK G    A  +L +  ++G  P  +TYNSI+D F 
Sbjct: 545 VFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFI 604

Query: 556 RSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQ------II 602
           +  +    +    R++ +   S N       ++  C  ++ D+    R + +       I
Sbjct: 605 KEGSVSSAL-TAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDI 663

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
             +G L+    G  KK     Q+I     +F ++    + PN V ++++++     N+ E
Sbjct: 664 AAYGALI---DGFCKK-----QDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNME 715

Query: 663 DA----SMLLEELRLFDNQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYN 717
            A      +L E    D Q Y  +  GLL   ++   V AL L+ E+           Y 
Sbjct: 716 AALNLQKRMLGEGISCDLQTYTTLIDGLL---KEGRLVLALDLYSEMSAKGIIPDIIIYT 772

Query: 718 ALTDMLWHFGQKRGAQLVVLEGKRRQVWENV 748
            L + L   GQ   AQ ++ E +R  +  NV
Sbjct: 773 VLINGLCGKGQLENAQKILAEMERDSITPNV 803


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 167/298 (56%), Gaps = 1/298 (0%)

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           ++YN +++   K G    HV   ++DML  G  P+  T+  LL    +   +E AR++F 
Sbjct: 18  LSYNYLLEVLAKSG-RCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
            M  +G   ++F+Y+ L+  +C+G ++D A E++ EM      PNVVTY +++ G  K G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           +L +A+++FS M + G   D V YN ++  ++K G   EA  + +EM   G      TYN
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           +LL G+ ++G++  V+ +F+ M      PN+ T++ L+D + K G   EA ++F E +  
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           G   DVV Y+ LI  +C  G    A  LL EM + G+ P++V+YN +ID + +S   +
Sbjct: 257 GCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALD 314



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 184/360 (51%), Gaps = 5/360 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++ +L + G+ D     +   L  G     Y +  L+ +  ++   +EA SVF  M    
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82

Query: 259 LKPNLVTYNAVIDACGKG-GVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWE 316
             PN+ +Y+ +I    +G  VD     E+ ++M+  G QP+ +T+ SLL+ +C  G L E
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVD--EAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKE 140

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           A  +LF+ MV+RG   D   YN L+D   K   M  A+ +  EM  K   P V TY++++
Sbjct: 141 AV-DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+++ G      ++F +M   G   +  ++N +L  + K+G   EA  +  EM S G  
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D V+YN L+ G   +GK  E +R+  +M    V P++++Y+ LID YSK G    A+++
Sbjct: 260 PDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F E  ++GL+ D   YS +ID LC+ G V +A  +  +M   G  P+      ++    R
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCR 379



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 187/388 (48%), Gaps = 7/388 (1%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+++F     +G    V+++S LI+   R     EA  + N M     +PN+VTY +++ 
Sbjct: 71  ARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLS 130

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              K G   K  V++F  M+  G  PD + +N L+   S+ G    A  LF EM+ +G  
Sbjct: 131 GLCKMG-KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
             +FTYN+LL    +  +      +  +M  +   PN+ T++ ++DG+ K G + +A  +
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F EM+ LG   D VSYNT++      G+  EA  + +EM  SG+  D V+YN L+ GY K
Sbjct: 250 FLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G  D   ++F ++    + P+  +YST+ID   + G    A  +F++    G   D  +
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE--CTV--DDV 567
              L+  LC+   +  +  L   M K    P +  YN ++    ++  ++  C +  +  
Sbjct: 370 VIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELT 429

Query: 568 ERDLGKQKESAN--LDAMCSQDDKDVQE 593
           ER      E +   L+ +   DDKD  E
Sbjct: 430 ERGFSPDVEISKVILETLRRSDDKDAAE 457



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 173/335 (51%), Gaps = 1/335 (0%)

Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV 283
           Y +   +++ L+    +SG C      +N M      PN  TY  ++ +  +    F+  
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQ-RFEEA 71

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
             +F  M   G  P+  +++ L+A   RG   + A  L NEM+  G   ++ TY +LL  
Sbjct: 72  RSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSG 131

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +CK  ++  A ++ + M  +   P+ V Y+ +IDG++K G + +A  +F EM   G    
Sbjct: 132 LCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPT 191

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +YN++LS +++ G F     + K+M   G   +  T+N LL G+ K G   E  R+F 
Sbjct: 192 VFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFL 251

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M++    P++++Y+TLI      G   EA ++ RE  ++G+  D+V Y+ LID   K+G
Sbjct: 252 EMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            ++ A+ L  E+ K G+ P+  +Y++IID   R+ 
Sbjct: 312 ALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG 346



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 213/453 (47%), Gaps = 12/453 (2%)

Query: 106 SKMHFGRPKIAMSTRHSVVAEEA-LHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLR 164
           S++H+    ++ +    V+A+     HV     D ++ G +   +         Y +LLR
Sbjct: 9   SQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYT--------YGYLLR 60

Query: 165 ELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGY 224
            L     + +A   F     +    N      S +I+ L R  KVD A  +    ++ G+
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSY--SILIAGLCRGQKVDEAAELLNEMIDGGH 118

Query: 225 GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVV 284
              V  + +L+S   + G  +EA+ +F+ M      P+ V YN +ID   K G D     
Sbjct: 119 QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKG-DMGEAY 177

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
            +F++ML  G  P   T+NSLL+  SR G +   ++LF +M+ +G   +IFT+N LLD  
Sbjct: 178 RLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK   M  A  +  EM +    P+VV+Y+T+I G    G+  +A  +  EM   G+G D 
Sbjct: 238 CKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDI 297

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           VSYN ++  Y+K G  + A+ +  E+  SG+  DA +Y+ ++    + GK      +F+ 
Sbjct: 298 VSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKD 357

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M A+  +P+      L+    +G    E+ ++F+   +      +  Y+ L+  LCK   
Sbjct: 358 MIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKR 417

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            +    +  E+T+ G  P+V     I++   RS
Sbjct: 418 SDDVCEIFHELTERGFSPDVEISKVILETLRRS 450



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 138/327 (42%), Gaps = 35/327 (10%)

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           ++YN LL    K G+ D V   +  M A    PN  TY  L+    +   ++EA  +FR 
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
               G   +V  YS LI  LC+   V+ A  LL+EM   G +PNVVTY S++    +   
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCK--- 134

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
                      +GK KE+ +L +      + V      D  +  V     ++K   G+  
Sbjct: 135 -----------MGKLKEAVDLFS------RMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVY 679
                       +F++M +    P V T++++L+  SR   F     L +++ L    V 
Sbjct: 178 R-----------LFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM-LRQGCVP 225

Query: 680 GV--AHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVV 736
            +   + LL G+ +    V+A  LF E++ +        YN L   +   G+   AQ ++
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLL 285

Query: 737 LEGKRRQVWENVWSESCLDLHLMSSGA 763
            E  R  V  ++ S + L      SGA
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGA 312


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 220/445 (49%), Gaps = 16/445 (3%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           ++++ +I+   R+G   +A+ VF+ M    + PN +TYN +ID   KGG D +    + D
Sbjct: 201 FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGG-DLEAGFRLRD 259

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M+ +G++P+ IT+N LL+   R G       L +EM  + +  D FTY+ L D + +  
Sbjct: 260 QMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNG 319

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
                  +  +     ++    T S +++G  K G++  A  +   +   G+   RV YN
Sbjct: 320 DSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYN 379

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+++ Y + G  E A     +M+S  I+ D +TYNAL+ G  K  +    + +  +M+ +
Sbjct: 380 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 439

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V+P + T++TLID Y + G  ++   +  E ++ GLK +VV Y ++++A CKNG +  A
Sbjct: 440 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 499

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER----DLGKQKESANL--DA 582
           V++LD+M  + + PN   YN+IIDA+      +     VE+     +     + NL    
Sbjct: 500 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 559

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC--RQEILCILGVFQKMHKLK 640
           +C+Q    + EA    N +     +L+ +        + C  R  I   L + Q+MHK  
Sbjct: 560 LCNQ--SQISEAEEIINSLSN--HRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 615

Query: 641 IKPNVVTFSAI---LNACSRCNSFE 662
           IK  V T+  +   L    R N  E
Sbjct: 616 IKSTVRTYHQLISGLGGAGRLNEME 640



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 191/428 (44%), Gaps = 43/428 (10%)

Query: 251 FNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP-DRITFNSLLAVC 309
           F  +     +P+   +N  + AC   G D    V +   M R+G  P +  ++N ++A  
Sbjct: 152 FGILASAGARPDTFAWNKAVQACVAAG-DLGEAVGMLRRMGRDGAPPPNAFSYNVVIA-- 208

Query: 310 SRGGLWEAARN-----LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
              G+W A R      +F+EM  R +  +  TYNT++D   KG  ++  F +  +M    
Sbjct: 209 ---GMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 265

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           + PN +TY+ ++ G  +AGR+ +   +  EM    +  D  +Y+ +    ++ G  +  L
Sbjct: 266 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 325

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +  +   +G+     T + LL G  K GK      + + +    + P  + Y+TLI+ Y
Sbjct: 326 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 385

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            + G  + A   F + K   +K D + Y+ALI+ LCK   + +A  LL EM   G+ P V
Sbjct: 386 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 445

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
            T+N++IDA+GR+   E                      C     ++QE G   N  +  
Sbjct: 446 ETFNTLIDAYGRTGQLE---------------------KCFIVLSEMQENGLKPN--VVS 482

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           +G +V      GK        I   + +   M    + PN   ++AI++A       + A
Sbjct: 483 YGSIVNAFCKNGK--------IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQA 534

Query: 665 SMLLEELR 672
            +L+E+++
Sbjct: 535 FILVEKMK 542



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 180/380 (47%), Gaps = 3/380 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L   L   G+    +  F   +K      D     S +++ L + GKV +A+ + ++
Sbjct: 308 YSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY--TCSILLNGLCKDGKVSIAEEVLQS 365

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +N G   T   ++ LI+ Y ++G  + A S F  MK  ++KP+ +TYNA+I+   K   
Sbjct: 366 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA-E 424

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
              +  ++  +M  NGV P   TFN+L+    R G  E    + +EM   G+  ++ +Y 
Sbjct: 425 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG 484

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           ++++A CK  ++  A  I+ +M  K++ PN   Y+ +ID Y + G  D A  +  +MK  
Sbjct: 485 SIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 544

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI    V+YN ++       +  EA  +   + +  +  DAV+YN L+     +G  D+ 
Sbjct: 545 GISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKA 604

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + ++M    +   + TY  LI      G   E   ++++  Q  +     +++ +++A
Sbjct: 605 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 664

Query: 519 LCKNGLVESAVSLLDEMTKE 538
             K G    A  L  EM ++
Sbjct: 665 YSKYGNEIKAEDLRKEMLQK 684


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 193/361 (53%), Gaps = 7/361 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I +L ++GK   A+ +    +++        ++ LI  + + G+ + A   F+ M  
Sbjct: 332 NSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLS 391

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGG 313
             + P+ +TY  +I   G+GG     V+E   +F +M+  G++PD +T+ +L+ V  + G
Sbjct: 392 KKISPDYITYTTLIQGFGQGG----KVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAG 447

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
               A +L NEMV  G+  +I TY  L+D +CK  ++D A E++ EM  K +  NV  Y+
Sbjct: 448 EMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYN 507

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           +M++G  KAG ++ A+ +  EM+  GI  D ++Y TV+  Y +LG  ++A  + +EM   
Sbjct: 508 SMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDR 567

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G++   VT+N L+ G+   G  ++  R+   M    + P+ +TY+TL+  +         
Sbjct: 568 GLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTT 627

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            +I++  +  G+  D   Y+ LI   CK   ++ A  L  EM ++G  P V +YN++I  
Sbjct: 628 TKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKR 687

Query: 554 F 554
           F
Sbjct: 688 F 688



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/502 (26%), Positives = 246/502 (49%), Gaps = 38/502 (7%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           +++ +I +  R G  +EA  +   M   +  P++V+Y+ VID  C  G  + K  +++ D
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG--ELKKALKLMD 317

Query: 289 DMLRNGVQPDRITFNS-LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           DM   G++P+R T+NS +L +C  G  +EA + +  EM+ + I  D   Y TL+    K 
Sbjct: 318 DMQIKGLKPNRYTYNSIILLLCKIGKSFEAEK-VLREMMSQKIIPDNVVYTTLIHGFFKL 376

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             +  A +   EM +K ISP+ +TY+T+I G+ + G++ +  N+F EM   G+  D V+Y
Sbjct: 377 GHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTY 436

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
            T++ +Y K G    A  +  EM   G+  + VTY AL+ G  K G+ D    + ++M+ 
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             +  N+  Y+++++   K G  ++A+++ +E + AG+  D + Y+ +IDA C+ G ++ 
Sbjct: 497 KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDK 556

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
           A  LL EM   G++P VVT+N +++ F      E    D +R LG   E           
Sbjct: 557 AHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE----DGDRLLGWMLE----------- 601

Query: 588 DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
            K +     T N ++               K++  R  +     ++++M    + P+  T
Sbjct: 602 -KGIVPDAITYNTLM---------------KQHCIRNSMNTTTKIYKRMRNQGVAPDSNT 645

Query: 648 FSAILNACSRCNSFEDASMLLEEL--RLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVK 705
           ++ ++    +  + ++A  L +E+  + +   V      +   Y+    ++A  LF+E++
Sbjct: 646 YNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMR 705

Query: 706 LMDSSTASAFYNALTDMLWHFG 727
                     YN   DM +  G
Sbjct: 706 GHGLVADGEIYNFFVDMCYEEG 727



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 191/389 (49%), Gaps = 34/389 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L RLGKV  A  +            V ++S +I  Y   G  ++A+ + + M+ 
Sbjct: 262 NIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQI 321

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFK-------------------------------HVV- 284
             LKPN  TYN++I    K G  F+                               HV  
Sbjct: 322 KGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRT 381

Query: 285 --EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             + FD+ML   + PD IT+ +L+    +GG     +NLF+EM+ RG+  D  TY TL+D
Sbjct: 382 ANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLID 441

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
             CK  +M  AF +  EM    ++PN+VTY  +IDG  K G LD A  +  EM+  G+ L
Sbjct: 442 VYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL 501

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           +   YN++++   K G  E+A+ + KEME +GI  DA+TY  ++  Y + G  D+  ++ 
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLL 561

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           ++M    + P ++T++ L++ +   G+ ++  ++     + G+  D + Y+ L+   C  
Sbjct: 562 QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR 621

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             + +   +   M  +G+ P+  TYN +I
Sbjct: 622 NSMNTTTKIYKRMRNQGVAPDSNTYNILI 650



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 205/402 (50%), Gaps = 17/402 (4%)

Query: 278 VDFKHVVE---IFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQD 333
           V+  H+ E   + D +L  G+     + N+ L+ + +     E A  +F E    GI  +
Sbjct: 201 VEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEY---GISWN 257

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             +YN ++ ++C+  ++  A  ++ +M  ++ +P+VV+YST+IDGY   G L  AL +  
Sbjct: 258 TTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMD 317

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           +M+  G+  +R +YN+++ +  K+G+  EA  V +EM S  I  D V Y  L+ G+ K G
Sbjct: 318 DMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLG 377

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
                 + F++M +  +SP+ +TY+TLI  + +GG   E   +F E    GLK D V Y+
Sbjct: 378 HVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYT 437

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            LID  CK G + +A SL +EM + G+ PN+VTY ++ID   +    + T +++  ++ K
Sbjct: 438 TLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD-TANELLDEMRK 496

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
           +    N+    S  +  + +AG  + Q IK+  ++                +  C LG  
Sbjct: 497 KGLQLNVCIYNSMVN-GICKAGNIE-QAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDI 554

Query: 634 QKMHKL-------KIKPNVVTFSAILNACSRCNSFEDASMLL 668
            K HKL        ++P VVTF+ ++N        ED   LL
Sbjct: 555 DKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL 596



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 187/369 (50%), Gaps = 1/369 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    +LG V  A   F+  L++        ++ LI  +G+ G   E  ++F+ M  
Sbjct: 367 TTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS 426

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             LKP+ VTY  +ID   K G +  +   + ++M++ G+ P+ +T+ +L+    + G  +
Sbjct: 427 RGLKPDEVTYTTLIDVYCKAG-EMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L +EM  +G+  ++  YN++++ ICK   ++ A ++M EM    I P+ +TY+T+I
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y + G +D A  +  EM   G+    V++N +++ +  LG  E+   +   M   GI 
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            DA+TYN L+  +  +   +   +++++M+   V+P+  TY+ LI  + K    KEA  +
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFL 665

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           ++E  + G    V  Y+ALI    K   +  A  L +EM   G+  +   YN  +D    
Sbjct: 666 YKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYE 725

Query: 557 SATTECTVD 565
               E T++
Sbjct: 726 EGDVEITLN 734



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 174/339 (51%), Gaps = 3/339 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I   G+ GKV   +N+F   ++ G       ++ LI  Y ++G    A S+ N M +
Sbjct: 402 TTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQ 461

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + PN+VTY A+ID  C  G +D  +  E+ D+M + G+Q +   +NS++    + G  
Sbjct: 462 MGMTPNIVTYGALIDGLCKHGELDTAN--ELLDEMRKKGLQLNVCIYNSMVNGICKAGNI 519

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  L  EM   GID D  TY T++DA C+   +D A +++ EM  + + P VVT++ +
Sbjct: 520 EQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVL 579

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ++G+   G L+D   +   M   GI  D ++YNT++  +           + K M + G+
Sbjct: 580 MNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D+ TYN L+ G+ K     E   ++++M      P + +Y+ LI  + K     EA +
Sbjct: 640 APDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARE 699

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           +F E +  GL AD  +Y+  +D   + G VE  ++L DE
Sbjct: 700 LFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 134/274 (48%), Gaps = 3/274 (1%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+I  L + G++D A  + +    +G    V  ++++++   ++G  ++AI +   M+  
Sbjct: 473 ALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVA 532

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            + P+ +TY  VIDA C  G +D  H  ++  +ML  G+QP  +TFN L+      G+ E
Sbjct: 533 GIDPDAITYTTVIDAYCRLGDIDKAH--KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE 590

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               L   M+ +GI  D  TYNTL+   C    M+   +I   M  + ++P+  TY+ +I
Sbjct: 591 DGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+ KA  L +A  ++ EM   G      SYN ++  + K  +  EA  + +EM   G+ 
Sbjct: 651 KGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLV 710

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
            D   YN  +    ++G  +    + ++    C+
Sbjct: 711 ADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCL 744


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 226/464 (48%), Gaps = 34/464 (7%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD A + F   L   +   +  F+ ++ ++ +  +   A+S+ + ++   ++P+L+T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           +I+  C  G + F     +   +L+ G  PD +T N+L+      G  + A +  ++++ 
Sbjct: 100 LINCFCHMGQITFG--FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           +G   +  +Y TL++ +CK      A +++ ++  +   PNVV YST+ID   K   + +
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSE 217

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +FSEM   GI  D V+Y+T++  +   G+ +EA+ +  EM    I  +  TYN L+ 
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
              K+GK  E + +   M   CV P+++TYSTL+D Y      K+A  +F      G+  
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           DV  Y+ LI+  CKN +V+ A++L  EM ++ + P +VTY+S+ID   +S       D +
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
           + ++  + + AN+    S  D  + + G  D  I                          
Sbjct: 398 D-EMHDRGQPANVITYSSLID-GLCKNGHLDRAI-------------------------- 429

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               +F KM    I+PN  TF+ +L+   +    +DA  + ++L
Sbjct: 430 ---ALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 470



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 191/359 (53%), Gaps = 9/359 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V  A +  +  L +G+     ++  LI+   + G  + AI +   +     KPN+V Y
Sbjct: 143 GQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMY 202

Query: 267 NAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
           + +IDA  K    ++ V E   +F +M   G+  D +T+++L+   C  G L EA   L 
Sbjct: 203 STIIDALCK----YQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAI-GLL 257

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           NEMV + I+ +++TYN L+DA+CK  ++  A  ++A M    + P+V+TYST++DGY   
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLV 317

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
             +  A ++F+ M  +G+  D  +Y  +++ + K    +EAL + KEM    +    VTY
Sbjct: 318 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           ++L+ G  K G+   V  + ++M       N++TYS+LID   K G    A+ +F + K 
Sbjct: 378 SSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKD 437

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            G++ +   ++ L+D LCK G ++ A  +  ++  +G   NV TYN +ID   +    E
Sbjct: 438 QGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLE 496



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 169/328 (51%), Gaps = 3/328 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + S +I  L +   V  A  +F     +G    V  +S LI  +   G  +EAI + N M
Sbjct: 201 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
               + PN+ TYN ++DA C +G V  K    +   ML+  V+PD IT+++L+       
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKV--KEAKSVLAVMLKACVKPDVITYSTLMDGYFLVY 318

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             + A+++FN M   G+  D+ TY  L++  CK   +D A  +  EM  KN+ P +VTYS
Sbjct: 319 EVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYS 378

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           ++IDG  K+GR+    ++  EM   G   + ++Y++++    K G  + A+ +  +M+  
Sbjct: 379 SLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GIR +  T+  LL G  K G+  + + +F+ +       N+ TY+ +ID + K GL +EA
Sbjct: 439 GIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEA 498

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCK 521
           + +  + +  G   D V +  +I AL K
Sbjct: 499 LTMLSKMEDNGCIPDAVTFEIIIIALFK 526



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 132/242 (54%), Gaps = 2/242 (0%)

Query: 315  WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +  A +L + +  +GI  D+FT N L++  C   Q+   F I+A++  +   P+ +T++T
Sbjct: 942  YSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTT 1001

Query: 375  MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
            +I+G    G+++ AL+   ++   G  L++VSY T+++   K+G    A+ + ++++   
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061

Query: 435  IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
             + D V YN ++    K     +   +F +M    +S +++TY+TLI  +   G  KEA+
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121

Query: 495  QIFREFKQAGLKADVVLYSALIDALCKNG--LVESAVSLLDEMTKEGIRPNVVTYNSIID 552
             +  +     +  +V  Y+ L+DALCK G  L++ ++S+L +M   G + N VT+  II 
Sbjct: 1122 GLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIIS 1181

Query: 553  AF 554
            A 
Sbjct: 1182 AL 1183



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 126/239 (52%), Gaps = 7/239 (2%)

Query: 247  AISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
            A+S+ + ++   ++P+L T N +I+  C  G + F     I   +L+ G  PD ITF +L
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFN--FSILAKILKRGYHPDTITFTTL 1002

Query: 306  L-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
            +  +C +G +   A +  ++++ +G   +  +Y TL++ +CK      A +++ ++  + 
Sbjct: 1003 INGLCLKGQV-NKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061

Query: 365  ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
              P+VV Y+T+ID   K   +  A  +F EM   GI  D V+YNT++  +  +G+ +EA+
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121

Query: 425  LVCKEMESSGIRKDAVTYNALLGGYGKQGK--YDEVRRMFEQMKADCVSPNLLTYSTLI 481
             +  +M    I  +  TYN L+    K+GK   DE   M  +M+ +    N +T+  +I
Sbjct: 1122 GLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIII 1180



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 135/299 (45%), Gaps = 38/299 (12%)

Query: 388  ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
            A+++   ++  GI  D  + N +++ +  +G+      +  ++   G   D +T+  L+ 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 448  GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
            G   +G+ ++     +++ A     N ++Y TLI+   K G  + A+++ R+      K 
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 508  DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
            DVV+Y+ +IDALCK+ LV  A  L  EM  +GI  +VVTYN++I  F       C V   
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGF-------CIV--- 1114

Query: 568  ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
                GK KE+  L           +   +T N  ++ +  LV     +GK       E L
Sbjct: 1115 ----GKLKEAIGLLN---------KMVLKTINPNVRTYNILVDALCKEGKD---LLDESL 1158

Query: 628  CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
             +L    KM     K N VTF  I++A    +  +    LL E+         +A GLL
Sbjct: 1159 SML---SKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEM---------IARGLL 1205



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 5/202 (2%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            + +I+ L   G+V+ A +  +  L +G+     ++  LI+   + G  + AI +   +  
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
               KP++V YN +IDA  K  +  K    +F +M   G+  D +T+N+L+   C  G L 
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSK-AYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118

Query: 316  EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ--MDLAFEIMAEMPAKNISPNVVTYS 373
            EA   L N+MV + I+ ++ TYN L+DA+CK  +  +D +  ++++M       N VT+ 
Sbjct: 1119 EAI-GLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFE 1177

Query: 374  TMIDGYAKAGRLDDALNMFSEM 395
             +I    +    D    +  EM
Sbjct: 1178 IIISALFEKDENDKVEKLLHEM 1199



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/230 (20%), Positives = 93/230 (40%), Gaps = 31/230 (13%)

Query: 455  YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            Y     +  +++   + P+L T + LI+ +   G       I  +  + G   D + ++ 
Sbjct: 942  YSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTT 1001

Query: 515  LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
            LI+ LC  G V  A+   D++  +G + N V+Y ++I+   +   T   +  + +  G+ 
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061

Query: 575  KE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL- 627
             +      +  +DA+C                + K +G L  E   +G   +      L 
Sbjct: 1062 TKPDVVMYNTIIDALCKH------------QLVSKAYG-LFFEMNVKGISADVVTYNTLI 1108

Query: 628  ---CI-------LGVFQKMHKLKIKPNVVTFSAILNA-CSRCNSFEDASM 666
               CI       +G+  KM    I PNV T++ +++A C       D S+
Sbjct: 1109 YGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESL 1158



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 1/110 (0%)

Query: 222  EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD-F 280
            +G    V  ++ LI  +   G  +EAI + N M    + PN+ TYN ++DA  K G D  
Sbjct: 1095 KGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLL 1154

Query: 281  KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
               + +   M  NG + + +TF  +++        +    L +EM+ RG+
Sbjct: 1155 DESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 154/593 (25%), Positives = 275/593 (46%), Gaps = 74/593 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+      G+W KA +C    +     ++D    +S +I IL + GKV  A  + E 
Sbjct: 159 YTSLIHGFCRSGKWEKA-KCLFNEMLDVGIRSDVTT-SSMLIDILCKEGKVIEANELLEV 216

Query: 219 ALNEGYGNTVYAFSALIS----------------------------AYGR--SGYCQEA- 247
            +  G    +  +S LI                             AYG    G CQ   
Sbjct: 217 MIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGN 276

Query: 248 --------ISVFNSMKRYNLK--PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP 297
                     + N   RY +K  P L++Y+ +ID   K   +     E+F +M   G+ P
Sbjct: 277 INTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRE-DEARELFKEMKAQGIMP 335

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
           D I++ +L+      G WE A+ LFNEM+  GI  D+ T + L+D +CK  ++  A +++
Sbjct: 336 DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLL 395

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
             +  +   P+VVT +T++ G     R+  A  +F +M+ LG   + V+  T++    + 
Sbjct: 396 EVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQS 455

Query: 418 GRFEEALLVCKEMESS----GI--RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           G  + AL + K M S     GI  + +A++Y+ ++ G  K G+ DE R +F++MKA  V 
Sbjct: 456 GNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVI 515

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P++++Y++LI  + + G +K+A  +F E    G++ DV  +S LID LCK G V  A  L
Sbjct: 516 PDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANEL 575

Query: 532 LDEMTKEGIRPNVVTYNSIIDA-------------FGRSATTECTVDDVERD--LGKQKE 576
           L+ M + G  PN VTY +++               F +     C  D V     +    +
Sbjct: 576 LEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 635

Query: 577 SANLDAMCSQDDKDVQEAGR--TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
           + N+        K + + G+  T+ +   +   ++ +   +  +E+  R+       +F+
Sbjct: 636 TGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARE-------LFK 688

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM 687
           +M  L + PNV++++++++   R    EDA  L  E+     Q+  V + +++
Sbjct: 689 EMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 741



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 198/418 (47%), Gaps = 50/418 (11%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+      G+W KA +C  F    +         +S +I +L + GKV  A  + E 
Sbjct: 340 YTTLIHGFCLSGKWEKA-KCL-FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEV 397

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY--------------------- 257
            +  G    V   + L+          +A  +F  M++                      
Sbjct: 398 VIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGN 457

Query: 258 --------------------NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP 297
                               N KPN ++Y+ +ID   K G +     E+F +M   GV P
Sbjct: 458 IKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRE-DEARELFKEMKALGVIP 516

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
           D I++ SL+    R G W+ A+ LFNEMV  G+  D+ T++ L+D +CK  ++  A E++
Sbjct: 517 DVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELL 576

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
             M  +   PN VTY+T++ G     R+ +A  +F +M+ LG   D V+Y T++    + 
Sbjct: 577 EVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQT 636

Query: 418 GRFEEALLVCKEMES------SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           G  + AL + K+M S      +  + D ++Y+ ++ G  K G+ DE R +F++MKA  V 
Sbjct: 637 GNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVI 696

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           PN+++Y++LI  + + G  ++A  +F E    G++ + V YS +I   CK G ++ A+
Sbjct: 697 PNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 203/395 (51%), Gaps = 22/395 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L +  + D A+ +F+    +G    V ++++LI  + RSG  ++A  +FN M  
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
             ++ ++ T + +ID  C +G V   +  E+ + M++ G   D +T+++L+  +C +  +
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEAN--ELLEVMIQRGCILDIVTYSTLIKGLCMKHRI 242

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP------AKNISPN 368
            EA R LF  M   G   D   Y TL+  +C+   ++ A ++  EM            P 
Sbjct: 243 SEATR-LFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           +++YS +IDG  K  R D+A  +F EMK  GI  D +SY T++  +   G++E+A  +  
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
           EM   GI+ D  T + L+    K+GK  E  ++ E +      P+++T +TL+       
Sbjct: 362 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKH 421

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL----LDEMTKEGI--RP 542
              +A Q+F + ++ G   +VV  + L+  LC++G ++ A+ L    L + +  GI  +P
Sbjct: 422 RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 481

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
           N ++Y+ IID   +     C  +D  R+L K+ ++
Sbjct: 482 NAISYSIIIDGLCK-----CGREDEARELFKEMKA 511



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 161/280 (57%), Gaps = 13/280 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L + G+ D A+ +F+     G    V ++++LI  + RSG  ++A  +FN M  
Sbjct: 487 SIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 546

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
             ++P++ T++ +ID  C +G V   +  E+ + M++ G  P+ +T+ +L+  +C    +
Sbjct: 547 IGVQPDVTTFSVLIDMLCKEGKVIEAN--ELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 604

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA------KNISPN 368
            EA + LF +M   G   D+ TY TL+  +C+   +  A E+  +M +       N  P+
Sbjct: 605 SEATQ-LFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPD 663

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           V++YS +IDG  K GR D+A  +F EMK LG+  + +SY +++  + + G+ E+A  +  
Sbjct: 664 VISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFN 723

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           EM   G++ +AVTY+ ++ G+ K+G+ D  + +F++M+A+
Sbjct: 724 EMVDQGVQLNAVTYSVMIHGFCKEGQID--KALFQKMEAN 761



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 171/341 (50%), Gaps = 22/341 (6%)

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSR 311
           M    ++P++ T   +ID  C +G V   +  E+ + M++ G   D +T+++L+  +C +
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEAN--ELLEVMVQRGCILDIVTYSTLIKGLCMK 58

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP------AKNI 365
             + EA + LF  M   G   D   Y TL+  +C+  ++++A  +  EM           
Sbjct: 59  HRISEATQ-LFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKC 117

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            P +V+YS +IDG  K  R D+A  +F EMK  G+  D +SY +++  + + G++E+A  
Sbjct: 118 KPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKC 177

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           +  EM   GIR D  T + L+    K+GK  E   + E M       +++TYSTLI    
Sbjct: 178 LFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 237

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE----GI- 540
                 EA ++F   ++ G + D + Y  L+  LC+ G + +A+ L  EM  +    GI 
Sbjct: 238 MKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIK 297

Query: 541 -RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
            +P +++Y+ IID   +        +D  R+L K+ ++  +
Sbjct: 298 CKPTLISYSIIIDGLCKDRR-----EDEARELFKEMKAQGI 333


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 231/490 (47%), Gaps = 55/490 (11%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN-LKPNLVTYNAVIDACGKGGVD 279
            EG    V  FS LI     +G   +A  V+  M     + PN  TY  +++   K G D
Sbjct: 374 TEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAG-D 432

Query: 280 FKHVVEIFDDMLRNG---------------------VQPDRITFNSLLAVCSRGGLWEAA 318
            + + + F+ ML                         +P  +T+N+L+   S+ G+   A
Sbjct: 433 SRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDA 492

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L   M+  G+  D+ T+N++LD +CK  ++  A  +      +   PNVVTYST+IDG
Sbjct: 493 LGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDG 552

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
            +K  ++D+AL + ++M  LG   + V+Y+TV+    K+GR E+A++V ++M  +G   D
Sbjct: 553 LSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 612

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           AVTYN L+ G+ K+ +  E   +  +M      P+++TY+TL     + G + EA++I  
Sbjct: 613 AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD 672

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK-EGIRPNVVTYNSIIDAFGRS 557
                G   + + YS+++D LCK G V  A+   ++M + E + P+V+ Y+++ID   ++
Sbjct: 673 YMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKA 732

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
              +   + +ER +                      AGR  + +   F  L+      G+
Sbjct: 733 GRIDEAYEFLERMI---------------------RAGRIPDVV--TFSILINGLCDAGR 769

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQ 677
            +          L +F  M +   K ++  ++A++NA      F  A  LLEE++     
Sbjct: 770 IDTG--------LELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIA 821

Query: 678 VYGVAHGLLM 687
              V HG+++
Sbjct: 822 KNTVTHGIVI 831



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 177/361 (49%), Gaps = 9/361 (2%)

Query: 203  LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL-KP 261
            L R G+ D A  I +     G       +S+++    ++G   EA+  F  M R  +  P
Sbjct: 658  LCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAP 717

Query: 262  NLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
            +++ Y+A+ID  C  G +D     E  + M+R G  PD +TF+ L+      G  +    
Sbjct: 718  HVIAYSALIDGLCKAGRID--EAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLE 775

Query: 321  LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
            LF  M  RG   DI+ YN +++A C   +   A+ ++ EM    I+ N VT+  +I    
Sbjct: 776  LFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALC 835

Query: 381  KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
               R+D+A++ F  +       D +SYNT+++      R E+AL + + M + G   DA 
Sbjct: 836  GNDRIDEAVSYFHSIP--EDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDAC 893

Query: 441  TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
             Y  ++ G  K G  +   ++ ++M++   SP+L TY+ +I   SK      A   F E 
Sbjct: 894  NYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEM 953

Query: 501  KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
             +  LK D ++YS+LIDA CK   V+ A  LL      GI P +  Y++++D+  ++  T
Sbjct: 954  LRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL---RSSGIEPTITMYSTMVDSLCKNRGT 1010

Query: 561  E 561
            +
Sbjct: 1011 D 1011



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 195/416 (46%), Gaps = 21/416 (5%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS-------------------AM 199
           Y FLL  L   G+  +  QCF   ++RE R +    + S                    +
Sbjct: 420 YAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTL 479

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           ++ L + G V  A  + E  +  G    V  F++++    +     +A +VF        
Sbjct: 480 VTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 539

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           +PN+VTY+ +ID   K        +++   M+  G + + +T+++++    + G  E A 
Sbjct: 540 RPNVVTYSTLIDGLSKMA-KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 598

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            +  +M   G   D  TYNTL+D   K  ++  A  ++ EM      P+VVTY+T+  G 
Sbjct: 599 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 658

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM-ESSGIRKD 438
            ++GR D+A+ +   M   G   + ++Y++++    K GR  EAL   ++M     +   
Sbjct: 659 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 718

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            + Y+AL+ G  K G+ DE     E+M      P+++T+S LI+     G     +++F 
Sbjct: 719 VIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFC 778

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
              + G KAD+  Y+A+I+A C  G   +A +LL+EM   GI  N VT+  +I A 
Sbjct: 779 GMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKAL 834



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 219/471 (46%), Gaps = 26/471 (5%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A N+F+ AL  G    V  +S LI    +     EA+ +   M     + N VTY+ V+D
Sbjct: 527 AHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVD 586

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGI 330
              K G   +  V +   M   G  PD +T+N+L+     R  L EA   L  EM+  G 
Sbjct: 587 GLLKVG-RMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAV-GLLREMLEAGF 644

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
              + TY TL   +C+  + D A EI+  M A+  +PN +TYS+++DG  KAGR+ +AL 
Sbjct: 645 HPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALG 704

Query: 391 MFSEM-KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            F +M +   +    ++Y+ ++    K GR +EA    + M  +G   D VT++ L+ G 
Sbjct: 705 YFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGL 764

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
              G+ D    +F  M       ++  Y+ +I+ Y   G +  A  +  E K  G+  + 
Sbjct: 765 CDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNT 824

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           V +  +I ALC N  ++ AVS    + ++    + ++YN++I +   S  +E  ++ +  
Sbjct: 825 VTHGIVIKALCGNDRIDEAVSYFHSIPEDC--RDEISYNTLITSLVASRRSEQALELLRA 882

Query: 570 DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI 629
            +         + M   D   + +AG  +     V  +L+ E   +G   +  R   + I
Sbjct: 883 MVADGGSPDACNYMTVMD--GLFKAGSPE-----VAAKLLQEMRSRGHSPDL-RTYTIMI 934

Query: 630 LGV------------FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
            G+            F++M +  +KP+ + +S++++A  + +  +DA  LL
Sbjct: 935 SGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL 985



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 197/439 (44%), Gaps = 12/439 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L    +  +A+Q  A  V+   R N      S ++  L ++G+++ A  +   
Sbjct: 546 YSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTY--STVVDGLLKVGRMEDAVVVLRQ 603

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + G       ++ LI  + +    +EA+ +   M      P++VTY  +     + G 
Sbjct: 604 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSG- 662

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH-RGIDQDIFTY 337
            F   VEI D M   G  P+ IT++S++    + G    A   F +M     +   +  Y
Sbjct: 663 RFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAY 722

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           + L+D +CK  ++D A+E +  M      P+VVT+S +I+G   AGR+D  L +F  M  
Sbjct: 723 SALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAE 782

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   D  +YN +++ Y   G F  A  + +EM++ GI K+ VT+  ++       + DE
Sbjct: 783 RGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDE 842

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
               F  +  DC   + ++Y+TLI         ++A+++ R     G   D   Y  ++D
Sbjct: 843 AVSYFHSIPEDC--RDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMD 900

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE- 576
            L K G  E A  LL EM   G  P++ TY  +I    ++       D  E  L K  + 
Sbjct: 901 GLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKP 960

Query: 577 -----SANLDAMCSQDDKD 590
                S+ +DA C  D  D
Sbjct: 961 DAIVYSSLIDAFCKADKVD 979



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/502 (24%), Positives = 232/502 (46%), Gaps = 61/502 (12%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           ++ + ++  L  LG+VD A   F+  L  G+      ++ ++    ++G  + A  V   
Sbjct: 142 EIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQL 201

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           +      P + T+   +D   K G +     E FD M + GV P+ +T+++L+    + G
Sbjct: 202 LAESFSSPTVFTFTIAVDGLSKAG-NLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAG 260

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             + A  L  +   +     +F +++LL  +C+  +++ A +++  MP     PNVV ++
Sbjct: 261 KLDIALGLLRD---KNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPC---VPNVVCFN 314

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM-ES 432
           ++++G  +A R+D+A  +F  MK  G   D ++YN +L    KL R  EA    + M  +
Sbjct: 315 SLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRT 374

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA-DCVSPNLLTYSTLIDVYSKGGLYK 491
            G   + VT++ L+ G    G+ ++   ++E+M A + +SPN  TY+ L++   K G  +
Sbjct: 375 EGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSR 434

Query: 492 EAMQIF-----REFKQAG----------------LKADVVLYSALIDALCKNGLVESAVS 530
              Q F     RE++ +                  +  +V Y+ L+  L K+G+V  A+ 
Sbjct: 435 RLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALG 494

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
           LL+ M + G+ P+V+T+NS++D                   G  KE   LDA      K 
Sbjct: 495 LLEFMIESGLSPDVITFNSVLD-------------------GLCKEQRILDA--HNVFKR 533

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
             E G   N +   +  L+   +   K +          L +  KM +L  + N VT+S 
Sbjct: 534 ALERGCRPNVV--TYSTLIDGLSKMAKMDE--------ALQLLAKMVELGCRANTVTYST 583

Query: 651 ILNACSRCNSFEDASMLLEELR 672
           +++   +    EDA ++L ++R
Sbjct: 584 VVDGLLKVGRMEDAVVVLRQMR 605



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 191/430 (44%), Gaps = 40/430 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L + G+V  A   F  A+  G+  TV  +S +I    R     +   +   M  
Sbjct: 5   NVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAG 64

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               PN VTYN +++A  G+G    K    + + M  NG  P+ ITF  ++    + G  
Sbjct: 65  RGCAPNAVTYNTLVNALLGQGRA--KEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EAA  + +EMV RG   D+  +  LL A+C+  ++D A+    ++     +P+ VTY+TM
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +DG  KAGRL+ A  +   +          ++   +   +K G    A      M  +G+
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242

Query: 436 RKDAVTYNALLGGYGKQGKYD-----------------------------EVRRMFEQMK 466
             + VTY+AL+ G  K GK D                              +    + +K
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLK 302

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           A    PN++ +++L++   +     EA ++F   K++G  ADV+ Y+ L+  LCK   + 
Sbjct: 303 AMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIP 362

Query: 527 SAVSLLDEMTK-EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN------ 579
            A   ++ M + EG  PNVVT++++I     +       +  ER +  +  S N      
Sbjct: 363 EAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAF 422

Query: 580 -LDAMCSQDD 588
            L+ +C   D
Sbjct: 423 LLEGLCKAGD 432



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 163/329 (49%), Gaps = 11/329 (3%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           ++ LI+   ++G   +A + F    ++  +P +VTY+ VID  C    VD     ++ ++
Sbjct: 4   YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVD--KGCKLLEE 61

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G  P+ +T+N+L+      G  + A +L   M   G   ++ T+  ++  +CK  +
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++ AF ++ EM  +   P+V  ++ ++    + GR+D+A   F ++  +G   D V+YNT
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    K GR E A +V + +  S       T+   + G  K G        F+ M    
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFRE-FKQAGLKADVVLYSALIDALCKNGLVESA 528
           VSPN +TY  LID   K G    A+ + R+   QAG+ A    +S+L+  LC+   +E A
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFA----FSSLLHGLCQAHRLEEA 297

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           + LL  M      PNVV +NS+++   ++
Sbjct: 298 IQLLKAMP---CVPNVVCFNSLMNGLCQA 323



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 135/279 (48%), Gaps = 2/279 (0%)

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           +VTYN +I+   K G         F   ++ G +P  +T+++++    R    +    L 
Sbjct: 1   MVTYNVLINGLCKAG-RVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLL 59

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            EM  RG   +  TYNTL++A+    +   AF ++  M A    P ++T+  +I G  K 
Sbjct: 60  EEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKE 119

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G ++ A  +  EM   G   D   +  +L    +LGR +EA    +++   G   DAVTY
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           N ++ G  K G+ +    + + +     SP + T++  +D  SK G    A + F    Q
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLL-DEMTKEGI 540
            G+  + V Y ALID LCK G ++ A+ LL D+ ++ G+
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGM 278



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 184/412 (44%), Gaps = 42/412 (10%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE- 217
            YT L   L   G + +A++   +   R    N      S+++  L + G+V  A   FE 
Sbjct: 651  YTTLCHGLCRSGRFDEAVEILDYMAARGCAPN--AITYSSIVDGLCKAGRVTEALGYFEK 708

Query: 218  TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKG 276
             A +E     V A+SALI    ++G   EA      M R    P++VT++ +I+  C  G
Sbjct: 709  MARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 768

Query: 277  GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
             +D    +E+F  M   G + D   +N+++      G + AA  L  EM   GI ++  T
Sbjct: 769  RIDTG--LELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVT 826

Query: 337  YNTLLDAICKGAQMD---------------------------------LAFEIMAEMPAK 363
            +  ++ A+C   ++D                                  A E++  M A 
Sbjct: 827  HGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVAD 886

Query: 364  NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
              SP+   Y T++DG  KAG  + A  +  EM+  G   D  +Y  ++S  +K  +   A
Sbjct: 887  GGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLA 946

Query: 424  LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
                +EM    ++ DA+ Y++L+  + K  K D+  ++   +++  + P +  YST++D 
Sbjct: 947  CDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDS 1003

Query: 484  YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
              K     +A+++ RE K    +  + ++++L  A    G V+ AV L++++
Sbjct: 1004 LCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 125/259 (48%)

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           +T+N L+    + G    A   F + +  G    + TY+T++D +C+  ++D   +++ E
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M  +  +PN VTY+T+++     GR  +A ++   M   G   + +++  ++    K G 
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            E A  V  EM   G   D   +  LL    + G+ DE    F+Q+     +P+ +TY+T
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           ++D   K G  + A  + +   ++     V  ++  +D L K G +  A    D M + G
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 540 IRPNVVTYNSIIDAFGRSA 558
           + PN VTY+++ID   ++ 
Sbjct: 242 VSPNTVTYDALIDGLCKAG 260



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 170/376 (45%), Gaps = 21/376 (5%)

Query: 127  EALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKRE 186
            EAL +    ARD+V    ++            Y+ L+  L   G   +A + F   + R 
Sbjct: 701  EALGYFEKMARDEVVAPHVIA-----------YSALIDGLCKAGRIDEAYE-FLERMIRA 748

Query: 187  ERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQE 246
             R  D     S +I+ L   G++D    +F      G    +YA++A+I+AY   G    
Sbjct: 749  GRIPDVVTF-SILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSA 807

Query: 247  AISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
            A ++   MK + +  N VT+  VI A CG   +D    V  F  +  +    D I++N+L
Sbjct: 808  AYALLEEMKTHGIAKNTVTHGIVIKALCGNDRID--EAVSYFHSIPEDC--RDEISYNTL 863

Query: 306  LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
            +         E A  L   MV  G   D   Y T++D + K    ++A +++ EM ++  
Sbjct: 864  ITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGH 923

Query: 366  SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            SP++ TY+ MI G +KA +L  A + F EM    +  D + Y++++  + K  + ++A  
Sbjct: 924  SPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAW- 982

Query: 426  VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
              K + SSGI      Y+ ++    K    D+   +  +MK+    P +  +++L   Y 
Sbjct: 983  --KLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYV 1040

Query: 486  KGGLYKEAMQIFREFK 501
              G   EA+++  + +
Sbjct: 1041 AEGRVDEAVKLVNDLQ 1056



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 98/193 (50%)

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           +VTY+ +I+G  KAGR+ DA   F +    G     V+Y+TV+    +    ++   + +
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
           EM   G   +AVTYN L+     QG+  E   + E+M A+   P L+T+  +I    K G
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
             + A ++  E    G   DV +++ L+ ALC+ G V+ A     ++   G  P+ VTYN
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 549 SIIDAFGRSATTE 561
           +++D   ++   E
Sbjct: 181 TMVDGLYKAGRLE 193


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 229/475 (48%), Gaps = 34/475 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  + +LG++  A ++      +GY   V ++S +++ Y R G   +   +   MKR  
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
           LKPN   Y ++I    +         E F +M+R G+ PD + + +L+   C RG +  A
Sbjct: 312 LKPNSYIYGSIIGLLCRI-CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI-RA 369

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A   F EM  R I  D+ TY  ++   C+   M  A ++  EM  K + P+ VT++ +I+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GY KAG + DA  + + M   G   + V+Y T++    K G  + A  +  EM   G++ 
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +  TYN+++ G  K G  +E  ++  + +A  ++ + +TY+TL+D Y K G   +A +I 
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           +E    GL+  +V ++ L++  C +G++E    LL+ M  +GI PN  T+NS++  +   
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY--- 606

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
               C  +++      +  +A    MCS   + V   G+T   ++K          G  K
Sbjct: 607 ----CIRNNL------KAATAIYKDMCS---RGVGPDGKTYENLVK----------GHCK 643

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             N      L     FQ+M       +V T+S ++    +   F +A  + +++R
Sbjct: 644 ARNMKEAWFL-----FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 184/328 (56%), Gaps = 3/328 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V +++ +I    + G  +EA  +   M+     P++++Y+ V++  C  G +D   V ++
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD--KVWKL 303

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
            + M R G++P+   + S++ +  R      A   F+EM+ +GI  D   Y TL+D  CK
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +  A +   EM +++I+P+V+TY+ +I G+ + G + +A  +F EM   G+  D V+
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +  +++ Y K G  ++A  V   M  +G   + VTY  L+ G  K+G  D    +  +M 
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + PN+ TY+++++   K G  +EA+++  EF+ AGL AD V Y+ L+DA CK+G ++
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            A  +L EM  +G++P +VT+N +++ F
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGF 571



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 179/342 (52%), Gaps = 3/342 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+IS   ++G +  A  +F     +G       F+ LI+ Y ++G+ ++A  V N M +
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
               PN+VTY  +ID   K G D     E+  +M + G+QP+  T+NS++  +C  G + 
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEG-DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA + L  E    G++ D  TY TL+DA CK  +MD A EI+ EM  K + P +VT++ +
Sbjct: 509 EAVK-LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ++G+   G L+D   + + M   GI  +  ++N+++  Y      + A  + K+M S G+
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  TY  L+ G+ K     E   +F++MK    S ++ TYS LI  + K   + EA +
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           +F + ++ GL AD  ++    D   K    ++ V  +DE+ +
Sbjct: 688 VFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 135/527 (25%), Positives = 235/527 (44%), Gaps = 56/527 (10%)

Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV 283
           +G+    F          G  +EA  VF  M  Y L  ++ + N  +    K        
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATA 230

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           + +F +    GV  +  ++N ++    + G  + A +L   M  +G   D+ +Y+T+++ 
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C+  ++D  ++++  M  K + PN   Y ++I    +  +L +A   FSEM   GI  D
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V Y T++  + K G    A     EM S  I  D +TY A++ G+ + G   E  ++F 
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M    + P+ +T++ LI+ Y K G  K+A ++     QAG   +VV Y+ LID LCK G
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL--- 580
            ++SA  LL EM K G++PN+ TYNSI++   +S   E  V      L  + E+A L   
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV-----KLVGEFEAAGLNAD 525

Query: 581 --------DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL----C 628
                   DA C   + D  +             +++ E  G+G +       +L    C
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQ-------------EILKEMLGKGLQPTIVTFNVLMNGFC 572

Query: 629 ILGVFQKMHKL-------KIKPNVVTFSAILNACSRCNSFEDASMLLEEL---------R 672
           + G+ +   KL        I PN  TF++++      N+ + A+ + +++         +
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632

Query: 673 LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
            ++N V G      M        +A  LF E+K    S + + Y+ L
Sbjct: 633 TYENLVKGHCKARNMK-------EAWFLFQEMKGKGFSVSVSTYSVL 672



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 183/373 (49%), Gaps = 3/373 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    + G +  A   F    +      V  ++A+IS + + G   EA  +F+ M  
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             L+P+ VT+  +I+   K G   K    + + M++ G  P+ +T+ +L+  +C  G L 
Sbjct: 415 KGLEPDSVTFTELINGYCKAG-HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL- 472

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           ++A  L +EM   G+  +IFTYN++++ +CK   ++ A +++ E  A  ++ + VTY+T+
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +D Y K+G +D A  +  EM   G+    V++N +++ +   G  E+   +   M + GI
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +A T+N+L+  Y  +        +++ M +  V P+  TY  L+  + K    KEA  
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F+E K  G    V  YS LI    K      A  + D+M +EG+  +   ++   D   
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKY 712

Query: 556 RSATTECTVDDVE 568
           +    +  VD ++
Sbjct: 713 KGKRPDTIVDPID 725


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 234/480 (48%), Gaps = 44/480 (9%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+   R  ++ LA  +    +  GY  ++   S+L++ Y       +A+++ + M    
Sbjct: 51  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 110

Query: 259 LKPNLVTYNAVIDACGKGGVDFKH-----VVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
            +P+ +T+  +I         F H      V + D M++ G QP+ +T+  ++  +C RG
Sbjct: 111 YRPDTITFTTLIHGL------FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            + + A NL N+M    I+ D+  +NT++D++CK   +D A  +  EM  K I PNVVTY
Sbjct: 165 DI-DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           S++I      GR  DA  + S+M    I  + V++N ++  + K G+F EA  +  +M  
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             I  D  TYN+L+ G+    + D+ ++MFE M +    P+L TY+TLI  + K    ++
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
             ++FRE    GL  D V Y+ LI  L  +G  ++A  +  +M  +G+ P+++TY+ ++D
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
               +   E  ++  +     QK    LD                    I ++  ++   
Sbjct: 404 GLCNNGKLEKALEVFDY---MQKSEIKLD--------------------IYIYTTMIEGM 440

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              GK ++    ++ C L +        +KPNVVT++ +++        ++A  LL++++
Sbjct: 441 CKAGKVDD--GWDLFCSLSL------KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 193/357 (54%), Gaps = 3/357 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G +DLA N+            V  F+ +I +  +  +  +A+++F  M+   ++PN
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +VTY+++I   C  G   +    ++  DM+   + P+ +TFN+L+    + G +  A  L
Sbjct: 220 VVTYSSLISCLCSYG--RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            ++M+ R ID DIFTYN+L++  C   ++D A ++   M +K+  P++ TY+T+I G+ K
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           + R++D   +F EM   G+  D V+Y T++      G  + A  V K+M S G+  D +T
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y+ LL G    GK ++   +F+ M+   +  ++  Y+T+I+   K G   +   +F    
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
             G+K +VV Y+ +I  LC   L++ A +LL +M ++G  P+  TYN++I A  R  
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 173/339 (51%), Gaps = 1/339 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L +   VD A N+F+    +G    V  +S+LIS     G   +A  + + M  
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PNLVT+NA+IDA  K G  F    ++ DDM++  + PD  T+NSL+         +
Sbjct: 249 KKINPNLVTFNALIDAFVKEG-KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A+ +F  MV +    D+ TYNTL+   CK  +++   E+  EM  + +  + VTY+T+I
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G    G  D+A  +F +M   G+  D ++Y+ +L      G+ E+AL V   M+ S I+
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D   Y  ++ G  K GK D+   +F  +    V PN++TY+T+I       L +EA  +
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
            ++ K+ G   D   Y+ LI A  ++G   ++  L+ EM
Sbjct: 488 LKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 163/307 (53%), Gaps = 6/307 (1%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M+++   P    FN LL+  ++   ++   +L  +M   GI  +++TYN L++  C+ +Q
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           + LA  ++ +M      P++VT S++++GY    R+ DA+ +  +M  +G   D +++ T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++       +  EA+ +   M   G + + VTY  ++ G  K+G  D    +  +M+A  
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           +  +++ ++T+ID   K     +A+ +F+E +  G++ +VV YS+LI  LC  G    A 
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDD-VERDLGKQKESAN--LDAM 583
            LL +M ++ I PN+VT+N++IDAF   G+    E   DD ++R +     + N  ++  
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300

Query: 584 CSQDDKD 590
           C  D  D
Sbjct: 301 CMHDRLD 307



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 148/294 (50%), Gaps = 1/294 (0%)

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           P++  +N ++ A  K    F  V+ + + M R G+  +  T+N L+    R      A  
Sbjct: 8   PSIFEFNKLLSAIAKMK-KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L  +M+  G +  I T ++LL+  C G ++  A  ++ +M      P+ +T++T+I G  
Sbjct: 67  LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
              +  +A+ +   M   G   + V+Y  V++   K G  + A  +  +ME++ I  D V
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
            +N ++    K    D+   +F++M+   + PN++TYS+LI      G + +A Q+  + 
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +  +  ++V ++ALIDA  K G    A  L D+M K  I P++ TYNS+I+ F
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 154/312 (49%), Gaps = 9/312 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L + G WS A Q  +  +  E++ N      +A+I    + GK   A+ + + 
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMI--EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +       ++ +++LI+ +       +A  +F  M   +  P+L TYN +I    KG  
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI----KGFC 336

Query: 279 DFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
             K V    E+F +M   G+  D +T+ +L+      G  + A+ +F +MV  G+  DI 
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TY+ LLD +C   +++ A E+   M    I  ++  Y+TMI+G  KAG++DD  ++F  +
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G+  + V+YNT++S        +EA  + K+M+  G   D+ TYN L+  + + G  
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516

Query: 456 DEVRRMFEQMKA 467
                +  +M++
Sbjct: 517 AASAELIREMRS 528


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 211/407 (51%), Gaps = 4/407 (0%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDL 211
           C  + YTF  +L+    +G+     + F   +  +   +  G   + +I    + G+VD 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQML--DNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  ++E  ++ G   ++Y +++L++A+ +    +EA+ +F +M     +P++VTY+ +I 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              K G   + +  +F  M+  G   + + +N+L+    +    E A  L  EM  +G  
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  TYNT+L  +C+  ++  A +    MP++  SP+VV Y+ ++D   K G+ D+A+ +
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F ++   G   D V+YN++L   A+    +EA  + K+M +SG   +  TY+ +L G+ +
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
             K D+  ++ E+M      P+++TY+ L+D   K  L  +A ++F      G   D+V 
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 361

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           YS +++ LCK   V  A  L D M +  + P+VVT+N ++D   ++ 
Sbjct: 362 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAG 408



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 219/444 (49%), Gaps = 30/444 (6%)

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           PN  T+  V+ +  K G   +   ++F+ ML NG+ PD I +N L+   ++ G  + A  
Sbjct: 6   PNRYTFRVVLKSFCKQG-KLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L+ EMV  G++  I+TYN+LL+A CK  +M  A E+   M  K   P+VVTYST+I G  
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 381 KAGRLDDALNM-FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
           K G++ +AL M F +M   G   + V+YN +++   K    E A  + +EM S G   D 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           +TYN +L G  + GK  E ++ F+ M +   SP+++ Y+ L+D   K G   EAM++F++
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
               G   D V Y++++  L +   ++ A  +  +M   G  PN  TY+ ++    R+  
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAK- 303

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
               VDD  + L   +E + + A+      ++   G     ++    +L +        +
Sbjct: 304 ---KVDDAHKVL---EEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV-----D 352

Query: 620 NRCRQEI---------LCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           N C  +I         LC          +F +M + K+ P+VVTF+ +++   +    ++
Sbjct: 353 NGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDE 412

Query: 664 ASMLLEELRLFDNQVYGVAHGLLM 687
           A  LL+++         VA+  LM
Sbjct: 413 AKDLLDQMTCSGCAPDYVAYNTLM 436



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 179/351 (50%), Gaps = 4/351 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           Y+ ++  L   G+ ++A++      K  ER      +A +A+I+ L +   ++ A  + E
Sbjct: 116 YSTIISGLCKTGKVTEALEMLFH--KMIERGCSANTVAYNALINGLCKDENIERAYKLLE 173

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
              ++GY      ++ ++S   R G   EA   F+SM      P++V YN ++DA  K G
Sbjct: 174 EMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEG 233

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
                 +++F D++  G  PD +T+NS+L   +R    + A  +F +MV  G   +  TY
Sbjct: 234 -KTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATY 292

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           + +L   C+  ++D A +++ EM      P+VVTY+ ++DG  K   +D A  +FS M  
Sbjct: 293 SIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD 352

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   D VSY+ VL+   K  +  +A ++   M    +  D VT+N L+ G  K GK DE
Sbjct: 353 NGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDE 412

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            + + +QM     +P+ + Y+TL++   K G + +A ++ +  K+ G  +D
Sbjct: 413 AKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 168/345 (48%), Gaps = 4/345 (1%)

Query: 197 SAMISILGRLGKVDLA-KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           S +IS L + GKV  A + +F   +  G      A++ALI+   +    + A  +   M 
Sbjct: 117 STIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMA 176

Query: 256 RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
                P+ +TYN ++   C  G V      + FD M   G  PD + +N LL    + G 
Sbjct: 177 SKGYVPDNITYNTILSGLCRMGKV--SEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGK 234

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            + A  LF +++ +G   D  TYN++L  + + + MD A E+  +M A   +PN  TYS 
Sbjct: 235 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSI 294

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++ G+ +A ++DDA  +  EM  +G   D V+YN +L    K    ++A  +   M  +G
Sbjct: 295 VLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 354

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D V+Y+ +L G  K  K  + R +F++M    + P+++T++ L+D   K G   EA 
Sbjct: 355 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 414

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
            +  +   +G   D V Y+ L++ L K G    A  L   M ++G
Sbjct: 415 DLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 163/334 (48%), Gaps = 45/334 (13%)

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
           +  SPN  T+  ++  + K G+L D   +F +M   GI  D + YN ++  YAK GR +E
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A  + +EM S G+     TYN+LL  + K+ K  E   +F+ M      P+++TYST+I 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 483 VYSKGGLYKEAMQ-IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
              K G   EA++ +F +  + G  A+ V Y+ALI+ LCK+  +E A  LL+EM  +G  
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-LDAMCSQD-DKDV-------- 591
           P+ +TYN+I+    R              +GK  E+    D+M S+    DV        
Sbjct: 182 PDNITYNTILSGLCR--------------MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLD 227

Query: 592 --QEAGRTDNQIIKVFGQLVAEK------------AGQGKKENRCRQEILCILGVFQKMH 637
              + G+TD + +K+F  ++A+              G  +K N    E +     F+KM 
Sbjct: 228 ALYKEGKTD-EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEM-----FKKMV 281

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                PN  T+S +L+   R    +DA  +LEE+
Sbjct: 282 ASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM 315



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 1/127 (0%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD A  +F T ++ G    + ++S +++   ++    +A  +F+ M    L P++VT+N 
Sbjct: 340 VDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNI 399

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           ++D   K G       ++ D M  +G  PD + +N+L+    + G    A  L   M  +
Sbjct: 400 LMDGLCKAG-KLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEK 458

Query: 329 GIDQDIF 335
           G   D F
Sbjct: 459 GFLSDCF 465


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 192/361 (53%), Gaps = 3/361 (0%)

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA- 272
           ++F+     G    +   S LI+ +    +   A SVF ++ +    PN +T N +I   
Sbjct: 78  SLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGL 137

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C +G  + K  +   D ++  G Q D++++ +L+    + G  +A   L  ++    +  
Sbjct: 138 CFRG--EIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKP 195

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D+  YNT+++++CK   +  A ++ +EM  K ISP+VVTY+T+I G+   G L +A ++ 
Sbjct: 196 DVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLL 255

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           +EMK   I  +  ++N ++   +K G+ +EA ++   M  + I+ D  TYN+L+ GY   
Sbjct: 256 NEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLV 315

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
            +    + +F  M    V+P++  Y+ +I+   K  +  EAM +F E K   +  D+V Y
Sbjct: 316 DEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTY 375

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG 572
           ++LID LCKN  +E A++L   M ++GI+P+V +Y  ++D   +S   E   +  +R L 
Sbjct: 376 NSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLA 435

Query: 573 K 573
           K
Sbjct: 436 K 436



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 235/473 (49%), Gaps = 36/473 (7%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIF 287
           + F+ ++S+   + +    IS+F   +   + P+L T + +I+  C +  +       +F
Sbjct: 58  FHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITL--AFSVF 115

Query: 288 DDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
            ++L+ G  P+ IT N+L+  +C RG + +A     +++V +G   D  +Y TL++ +CK
Sbjct: 116 ANILKRGFHPNAITLNTLIKGLCFRGEIKKALY-FHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +      ++ ++   ++ P+VV Y+T+I+   K   L DA +++SEM   GI  D V+
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T++  +  +G  +EA  +  EM+   I  +  T+N L+    K+GK  E + +   M 
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
             C+ P++ TY++LID Y      K A  +F    Q G+  DV  Y+ +I+ LCK  +V+
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKE----SANL 580
            A+SL +EM  + + P++VTYNS+ID   ++   E  +   +R  + G Q +    +  L
Sbjct: 355 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILL 414

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
           D +C        ++GR ++   ++F +L+A+               LC  G F +   LK
Sbjct: 415 DGLC--------KSGRLEDA-KEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLK 465

Query: 641 IK-------PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
            K       P+ VTF  I+ A    +  + A  +L E+         +A GLL
Sbjct: 466 SKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREM---------IARGLL 509



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 196/403 (48%), Gaps = 7/403 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+       + LA ++F   L  G+       + LI      G  ++A+   + +  
Sbjct: 96  SILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVA 155

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              + + V+Y  +I+   K G + K V  +   +  + V+PD + +N+++    +  L  
Sbjct: 156 QGFQLDQVSYGTLINGLCKTG-ETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLG 214

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A ++++EM+ +GI  D+ TY TL+   C    +  AF ++ EM  KNI+PNV T++ +I
Sbjct: 215 DACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILI 274

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D  +K G++ +A  + + M    I  D  +YN+++  Y  +   + A  V   M   G+ 
Sbjct: 275 DALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVT 334

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D   Y  ++ G  K    DE   +FE+MK   + P+++TY++LID   K    + A+ +
Sbjct: 335 PDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIAL 394

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +  K+ G++ DV  Y+ L+D LCK+G +E A  +   +  +G   NV  Y  +I+   +
Sbjct: 395 CKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCK 454

Query: 557 SATTECTVDDVER--DLGKQKESANLD----AMCSQDDKDVQE 593
           +   +  +D   +  D G   ++   D    A+  +D+ D  E
Sbjct: 455 AGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAE 497



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 186/380 (48%), Gaps = 5/380 (1%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           L++ L  RGE  KA+  F   +  +  + DQ    + +I+ L + G+      +      
Sbjct: 133 LIKGLCFRGEIKKALY-FHDQLVAQGFQLDQVSYGT-LINGLCKTGETKAVARLLRKLEG 190

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDF 280
                 V  ++ +I++  ++    +A  V++ M    + P++VTY  +I   C  G +  
Sbjct: 191 HSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHL-- 248

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           K    + ++M    + P+  TFN L+   S+ G  + A+ L   M+   I  D+FTYN+L
Sbjct: 249 KEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSL 308

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +D      ++  A  +   M  + ++P+V  Y+ MI+G  K   +D+A+++F EMK   +
Sbjct: 309 IDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNM 368

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D V+YN+++    K    E A+ +CK M+  GI+ D  +Y  LL G  K G+ ++ + 
Sbjct: 369 IPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKE 428

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F+++ A     N+  Y+ LI+   K G + EA+ +  + +  G   D V +  +I AL 
Sbjct: 429 IFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALF 488

Query: 521 KNGLVESAVSLLDEMTKEGI 540
           +    + A  +L EM   G+
Sbjct: 489 EKDENDKAEKILREMIARGL 508



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 184/402 (45%), Gaps = 24/402 (5%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           V  F+ ML     P    FN++L+       +    +LF +    GI  D+ T + L++ 
Sbjct: 42  VASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINC 101

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C  A + LAF + A +  +   PN +T +T+I G    G +  AL    ++   G  LD
Sbjct: 102 FCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLD 161

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
           +VSY T+++   K G  +    + +++E   ++ D V YN ++    K     +   ++ 
Sbjct: 162 QVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYS 221

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M    +SP+++TY+TLI  +   G  KEA  +  E K   +  +V  ++ LIDAL K G
Sbjct: 222 EMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEG 281

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAF--------GRSATTECTVDDVERDLGKQK 575
            ++ A  LL  M K  I+P+V TYNS+ID +         +          V  D+  Q 
Sbjct: 282 KMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDV--QC 339

Query: 576 ESANLDAMCSQDDKD----VQEAGRTDNQI--IKVFGQLVAEKAGQGKKENRCRQEILCI 629
            +  ++ +C     D    + E  +  N I  I  +  L+    G  K  +  R   LC 
Sbjct: 340 YTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLI---DGLCKNHHLERAIALC- 395

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               ++M +  I+P+V +++ +L+   +    EDA  + + L
Sbjct: 396 ----KRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRL 433



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 122/241 (50%), Gaps = 3/241 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L + GK+  AK +    +       V+ +++LI  Y      + A  VF SM +  
Sbjct: 273 LIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRG 332

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           + P++  Y  +I+  C    VD    + +F++M    + PD +T+NSL+    +    E 
Sbjct: 333 VTPDVQCYTNMINGLCKTKMVD--EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLER 390

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  L   M  +GI  D+++Y  LLD +CK  +++ A EI   + AK    NV  Y+ +I+
Sbjct: 391 AIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLIN 450

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
              KAG  D+AL++ S+M+  G   D V+++ ++    +    ++A  + +EM + G+ K
Sbjct: 451 RLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLLK 510

Query: 438 D 438
           +
Sbjct: 511 E 511


>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
 gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
          Length = 599

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 197/369 (53%), Gaps = 1/369 (0%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G + ++++    + G ++  + +      EG+   +  ++ +++ +      ++ +S F+
Sbjct: 122 GIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFH 181

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            +K   L P   TY  ++    K G +    ++I ++M ++GV P+++ +  ++   +RG
Sbjct: 182 RLKACGLSPTAATYGCIVKLFTKAG-NMAKALDILEEMDKHGVSPNKMIYAMIMDGYARG 240

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G + AA  ++ +MV  G+  DI  YN L+ A CK  +MD A  ++  + A  + P + TY
Sbjct: 241 GDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETY 300

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           ++++DGY K G +  AL +F  +K  G+    VSYN++LS  AK  + E A L+  EM +
Sbjct: 301 TSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLA 360

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           +G+  +  +Y AL  GY + G  ++   MF++MK + ++ +++ Y  L+    K G  + 
Sbjct: 361 NGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQR 420

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A ++F++   AGLK + + Y  ++D   + G +  A  LL++M K G   + + Y S I 
Sbjct: 421 AAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIK 480

Query: 553 AFGRSATTE 561
           A  RS  TE
Sbjct: 481 ACFRSGDTE 489



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 118/481 (24%), Positives = 223/481 (46%), Gaps = 75/481 (15%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +  L+  Y R G    A + F +M+  ++KPN+  Y ++I A  +   D +  V   ++M
Sbjct: 20  YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEAR-DMEGAVACTEEM 78

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           L  G+Q +   F S+++  +  G  EAA + F +     +      YN+++ A C+   M
Sbjct: 79  LSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNM 138

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYA------------------------------ 380
           +    ++A+M  +    N+  Y+T+++G+A                              
Sbjct: 139 ETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCI 198

Query: 381 -----KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
                KAG +  AL++  EM   G+  +++ Y  ++  YA+ G F  A  V ++M S+G+
Sbjct: 199 VKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGL 258

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D V YN L+  + K G+ D+   + E ++A+ + P + TY++++D Y KGG  ++A++
Sbjct: 259 KPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALE 318

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F   K AGL+  VV Y++L+  L K   +E+A  +L+EM   G+ PN  +Y ++ + + 
Sbjct: 319 VFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYA 378

Query: 556 RSATTECTVDDVERDLG----KQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
           R+        DVE+  G     +KE+  +D                    I  +G L+  
Sbjct: 379 RAG-------DVEKAFGMFQRMKKENLAID--------------------IVAYGALLKA 411

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               G  +            VFQ++    +K N +T+  +L+  +R      A  LL ++
Sbjct: 412 CCKSGAMQRAAE--------VFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDM 463

Query: 672 R 672
           +
Sbjct: 464 Q 464



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/369 (23%), Positives = 175/369 (47%), Gaps = 3/369 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++ +  + G +  A +I E     G       ++ ++  Y R G    A  V+  M    
Sbjct: 198 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 257

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           LKP++V YN ++ A C  G +D    + + +++  N + P   T+ S+L    +GG  + 
Sbjct: 258 LKPDIVIYNILVHAFCKAGRMD--KALGVLENIEANRLLPTIETYTSILDGYVKGGNIQK 315

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +F+ +   G+   + +YN+LL  + K  QM+ A  ++ EM A  + PN  +Y+ + +
Sbjct: 316 ALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTE 375

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GYA+AG ++ A  MF  MK   + +D V+Y  +L    K G  + A  V +++  +G++ 
Sbjct: 376 GYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKH 435

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + +TY  +L G+ ++G+  + R +   M+      + + Y++ I    + G  +E  +  
Sbjct: 436 NRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETL 495

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
              ++  L+ +   Y+ LI         + A+S  ++    G++ +    N ++      
Sbjct: 496 AVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSGLISC 555

Query: 558 ATTECTVDD 566
           A+   T+ +
Sbjct: 556 ASQNSTLGE 564


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 184/363 (50%), Gaps = 14/363 (3%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G    A  +F+  + +    TV  ++ LI          EA S+F +M+   + PNL 
Sbjct: 205 RQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLY 264

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TYN ++D   K     K  +E++ +ML +G+ P+ +TF  L+    +     +AR    +
Sbjct: 265 TYNTMMDGYCKIA-HVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLID 323

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G+  +IF YN L+D  CK   +  A  + +E+    I P+V TYS +I G     R
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +++A  +  EMK  G   + V+YNT++  Y K G  E+A+ VC +M   GI  + +T++ 
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ GY K GK +    ++ +M    + P+++ Y+ LID + K G  KEA ++ +E ++AG
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLL-------------DEMTKEGIRPNVVTYNSII 551
           L  +V   S LID LCK+G +  A+ L              +E+ +    PN V Y ++I
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563

Query: 552 DAF 554
              
Sbjct: 564 QGL 566



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 214/451 (47%), Gaps = 56/451 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF-- 216
           Y+ ++  L     ++KA +C    + +  +K+ + ++  ++ ++L RL       N+F  
Sbjct: 73  YSAIIHVLTGAKLYAKA-RCLMRDLIQCLQKSRRSRICCSVFNVLSRLESSKFTPNVFGV 131

Query: 217 -----------ETALNEGYGNTVY----AFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
                      E AL   Y   V     A + ++    + G       V+  M      P
Sbjct: 132 LIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASP 191

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARN 320
           N+VTY  +ID C + G DF     +FD+M+   + P  + +  L+  +C    + EA  +
Sbjct: 192 NVVTYGTLIDGCCRQG-DFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEA-ES 249

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT--------- 371
           +F  M + G+  +++TYNT++D  CK A +  A E+  EM    + PNVVT         
Sbjct: 250 MFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLC 309

Query: 372 --------------------------YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
                                     Y+ +IDGY KAG L +AL++ SE++   I  D  
Sbjct: 310 KTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVF 369

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y+ ++     + R EEA  + +EM+  G   +AVTYN L+ GY K+G  ++   +  QM
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
               + PN++T+STLID Y K G  + AM ++ E    GL  DVV Y+ALID   K+G  
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNT 489

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           + A  L  EM + G+ PNV T + +ID   +
Sbjct: 490 KEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 212/485 (43%), Gaps = 40/485 (8%)

Query: 208 KVDLAKN--IFETALNEGYGNTVYA-----FSALISAYGRSGYCQEAISVFNSMKRY--- 257
           + DLAKN  ++   ++   G  +YA        LI    +S   +   SVFN + R    
Sbjct: 63  RADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCSVFNVLSRLESS 122

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
              PN+  +  +I A  + G+    V E      +  V P     N +L    + G ++ 
Sbjct: 123 KFTPNV--FGVLIIAFSEMGL----VEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDT 176

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
              ++ +MV RG   ++ TY TL+D  C+      AF +  EM  K I P VV Y+ +I 
Sbjct: 177 MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR 236

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G     R+ +A +MF  M+  G+  +  +YNT++  Y K+   ++AL +  EM   G+  
Sbjct: 237 GLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLP 296

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + VT+  L+ G  K  +    R+    M +  V PN+  Y+ LID Y K G   EA+ + 
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E ++  +  DV  YS LI  LC    +E A  LL EM K+G  PN VTYN++ID + + 
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416

Query: 558 ATTECTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
              E  ++   +   K  E      S  +D  C     +      T+  I  +   +VA 
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476

Query: 612 KA--------GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
            A        G  K+  R  +E          M +  + PNV T S +++   +     D
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKE----------MQEAGLHPNVFTLSCLIDGLCKDGRISD 526

Query: 664 ASMLL 668
           A  L 
Sbjct: 527 AIKLF 531



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 112/522 (21%), Positives = 220/522 (42%), Gaps = 80/522 (15%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    + GK++ A  ++   + +G    V A++ALI  + + G  +EA  +   M+ 
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIF-------------DDMLRNGVQPDRITFN 303
             L PN+ T + +ID   K G      +++F             +++ R+   P+ + + 
Sbjct: 502 AGLHPNVFTLSCLIDGLCKDG-RISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYT 560

Query: 304 SLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           +L+  +C+ G +++A++  F++M   G+  D+FT   ++    +   +     + A++  
Sbjct: 561 ALIQGLCTDGRIFKASK-FFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILK 619

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG---LDRVSYNTVLSIYAKLGR 419
             I PN   Y  +  GY ++G L  AL+      F G G   LDRV+     S Y    R
Sbjct: 620 MGIIPNSSVYRVLAKGYEESGYLKSALS------FCGEGVQPLDRVNSEPWGS-YTIRSR 672

Query: 420 FEEALLV-CKEMESSGIRKDAVTYNALLGGY-------------------GKQG--KYDE 457
           F+  ++   KE  SS +    +    LL  +                   G++G  + ++
Sbjct: 673 FQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNK 732

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             ++F QM+ D   P+++T +  +   +  G       I    +  GL  D+ L ++LI+
Sbjct: 733 ALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLIN 792

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
              K G + +A  L D   K+    +V T+ S+I         E  +      L  + + 
Sbjct: 793 MYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEAL-----QLFTEMKE 843

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG---QGKKENR------------- 621
            N  A  ++ + + + +    N +  +   +    AG   +GK+  R             
Sbjct: 844 TNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRIS 903

Query: 622 ---CRQEILCILGVFQKMH----KLKIKPNVVTFSAILNACS 656
              C  ++LC  G+  + +    K+ ++PN V +  +L ACS
Sbjct: 904 HFGCMVDLLCRAGLLTEAYEFILKMPVRPNAVVWRTLLGACS 945



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKR-YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
            F  ++ A   +G  +E    F SMK  Y+L+P +  +  ++D   + G+    + E ++
Sbjct: 868 TFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGL----LTEAYE 923

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGG 313
            +L+  V+P+ + + +LL  CS  G
Sbjct: 924 FILKMPVRPNAVVWRTLLGACSLQG 948


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 155/585 (26%), Positives = 263/585 (44%), Gaps = 49/585 (8%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            +  LI  Y R G  Q+++ +F  M  Y   P++ T NA++ +  K G D   V     +
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS-VWSFLKE 223

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           ML+  + PD  TFN L+ V    G +E +  L  +M   G    I TYNT+L   CK  +
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              A E++  M +K +  +V TY+ +I    ++ R+     +  +M+   I  + V+YNT
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +++ ++  G+   A  +  EM S G+  + VT+NAL+ G+  +G + E  +MF  M+A  
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           ++P+ ++Y  L+D   K   +  A   +   K+ G+    + Y+ +ID LCKNG ++ AV
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVERDLGKQKESANLDAM--- 583
            LL+EM+K+GI P++VTY+++I+ F   GR  T +  V  + R +G          +   
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR-VGLSPNGIIYSTLIYN 522

Query: 584 -----CSQDDKDVQEA----GRTDNQIIKVFGQLV-----AEKAGQGKKENRCRQ----- 624
                C ++   + EA    G T +     F  LV     A K  + ++  RC       
Sbjct: 523 CCRMGCLKEAIRIYEAMILEGHTRDHF--TFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580

Query: 625 -----------------EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
                            E L    VF +M K+   P   T+ ++L    +     +A   
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640

Query: 668 LEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWH 725
           L+ L      V  V +  L+    +     +A+SLF E+        S  Y +L   L  
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700

Query: 726 FGQKRGAQLVVLEGKRR-QVWENVWSESCLDLHLMSSGAARAMVH 769
            G+   A L   E + R  V  N    +C    +  +G  +A ++
Sbjct: 701 KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 745



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 214/467 (45%), Gaps = 35/467 (7%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GKV +A  +    L+ G       F+ALI  +   G  +EA+ +F  M+   L P+ V+Y
Sbjct: 352 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 411

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
             ++D   K   +F      +  M RNGV   RIT+  ++    + G  + A  L NEM 
Sbjct: 412 GVLLDGLCKNA-EFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             GID DI TY+ L++  CK  +   A EI+  +    +SPN + YST+I    + G L 
Sbjct: 471 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 530

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A+ ++  M   G   D  ++N +++   K G+  EA    + M S GI  + V+++ L+
Sbjct: 531 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 590

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GYG  G+  +   +F++M      P   TY +L+    KGG  +EA +  +        
Sbjct: 591 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 650

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            D V+Y+ L+ A+CK+G +  AVSL  EM +  I P+  TY S+I    R   T   +  
Sbjct: 651 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-- 708

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
                 K+ E+                     N+++         KAGQ K         
Sbjct: 709 ---LFAKEAEA---------------RGNVLPNKVMYTCFVDGMFKAGQWKA-------- 742

Query: 627 LCILGVF--QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               G++  ++M  L   P++VT +A+++  SR    E  + LL E+
Sbjct: 743 ----GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 785



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 184/361 (50%), Gaps = 3/361 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I++L   G  + +  + +     GY  T+  ++ ++  Y + G  + AI + + MK   
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 298

Query: 259 LKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           +  ++ TYN +I D C    +   ++  +  DM +  + P+ +T+N+L+   S  G    
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYL--LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 356

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  L NEM+  G+  +  T+N L+D          A ++   M AK ++P+ V+Y  ++D
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K    D A   +  MK  G+ + R++Y  ++    K G  +EA+++  EM   GI  
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 476

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D VTY+AL+ G+ K G++   + +  ++    +SPN + YSTLI    + G  KEA++I+
Sbjct: 477 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 536

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
                 G   D   ++ L+ +LCK G V  A   +  MT +GI PN V+++ +I+ +G S
Sbjct: 537 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 596

Query: 558 A 558
            
Sbjct: 597 G 597



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 184/372 (49%), Gaps = 3/372 (0%)

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
           DLA+  +      G       ++ +I    ++G+  EA+ + N M +  + P++VTY+A+
Sbjct: 425 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 484

Query: 270 IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
           I+   K G  FK   EI   + R G+ P+ I +++L+  C R G  + A  ++  M+  G
Sbjct: 485 INGFCKVG-RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
             +D FT+N L+ ++CK  ++  A E M  M +  I PN V++  +I+GY  +G    A 
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 603

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
           ++F EM  +G      +Y ++L    K G   EA    K + +     D V YN LL   
Sbjct: 604 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 663

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG-LKAD 508
            K G   +   +F +M    + P+  TY++LI    + G    A+   +E +  G +  +
Sbjct: 664 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 723

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            V+Y+  +D + K G  ++ +   ++M   G  P++VT N++ID + R    E T +D+ 
Sbjct: 724 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT-NDLL 782

Query: 569 RDLGKQKESANL 580
            ++G Q    NL
Sbjct: 783 PEMGNQNGGPNL 794



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 235/508 (46%), Gaps = 16/508 (3%)

Query: 169 RGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTV 228
           R + +K I C  + V      +  G + S +I    R+G +  A  I+E  + EG+    
Sbjct: 493 RFKTAKEIVCRIYRVGL----SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDH 548

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           + F+ L+++  ++G   EA      M    + PN V+++ +I+  G  G   K    +FD
Sbjct: 549 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK-AFSVFD 607

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +M + G  P   T+ SLL    +GG    A      +       D   YNTLL A+CK  
Sbjct: 608 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 667

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL-DRVSY 407
            +  A  +  EM  ++I P+  TY+++I G  + G+   A+    E +  G  L ++V Y
Sbjct: 668 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 727

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
              +    K G+++  +   ++M++ G   D VT NA++ GY + GK ++   +  +M  
Sbjct: 728 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 787

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
               PNL TY+ L+  YSK      +  ++R     G+  D +   +L+  +C++ ++E 
Sbjct: 788 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 847

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESANLDAMCS 585
            + +L      G+  +  T+N +I     +       D V+    LG   +    DAM S
Sbjct: 848 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 907

Query: 586 QDDKD--VQEAGRTDNQIIKVFGQLVAEKAGQ--GKKENRCR-QEILCILGVFQKMHKLK 640
             +++   QE+    +++ K   Q ++ ++ +  G     CR  +I     V ++M   K
Sbjct: 908 VLNRNHRFQESRMVLHEMSK---QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 964

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLL 668
           I P  V  SA++ A ++C   ++A++LL
Sbjct: 965 ICPPNVAESAMVRALAKCGKADEATLLL 992



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 185/415 (44%), Gaps = 6/415 (1%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKN--DQGKLASAMISILGRLGKVDLAKNIF 216
            YT L+  L  +G   K +    FA + E R N      + +  +  + + G+        
Sbjct: 691  YTSLISGLCRKG---KTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 747

Query: 217  ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
            E   N G+   +   +A+I  Y R G  ++   +   M   N  PNL TYN ++    K 
Sbjct: 748  EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 807

Query: 277  GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
              D      ++  ++ NG+ PD++T +SL+       + E    +    + RG++ D +T
Sbjct: 808  K-DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT 866

Query: 337  YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
            +N L+   C   +++ AF+++  M +  IS +  T   M+    +  R  ++  +  EM 
Sbjct: 867  FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926

Query: 397  FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
              GI  +   Y  +++   ++G  + A +V +EM +  I    V  +A++    K GK D
Sbjct: 927  KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 986

Query: 457  EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
            E   +   M    + P + +++TL+ +  K G   EA+++       GLK D+V Y+ LI
Sbjct: 987  EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1046

Query: 517  DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
              LC  G +  A  L +EM  +G   N  TY ++I       T     D + +DL
Sbjct: 1047 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDL 1101



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 141/343 (41%), Gaps = 47/343 (13%)

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
           N +P+V  Y  +I  Y + G + D+L +F  M   G      + N +L    K G     
Sbjct: 160 NSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 217

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
               KEM    I  D  T+N L+     +G +++   + ++M+    +P ++TY+T++  
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y K G +K A+++    K  G+ ADV  Y+ LI  LC++  +     LL +M K  I PN
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337

Query: 544 VVTYNSIIDAFGRSA---------------------TTECTVDDVERDLGKQKESAN--- 579
            VTYN++I+ F                          T   + D     G  KE+     
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397

Query: 580 -----------------LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
                            LD +C   + D+    R     +K  G  V      G  +  C
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDL---ARGFYMRMKRNGVCVGRITYTGMIDGLC 454

Query: 623 RQEILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           +   L   + +  +M K  I P++VT+SA++N   +   F+ A
Sbjct: 455 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 497


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 194/357 (54%), Gaps = 3/357 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +++   R  ++ LA +     +  G+   +  F +L++ + R     +A+ +F+ M 
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMV 178

Query: 256 RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               +PN+V YN +ID  C    VD  + +++ + M  +G++PD +T+NSL++     G 
Sbjct: 179 EMGYEPNVVIYNTIIDGLCKSKQVD--NALDLLNRMEVDGIRPDAVTYNSLISGLCNSGR 236

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           W+ A  + + M  R I  D+FT+N L+DA  K  ++  A E+  EM  +++ P++VTYS 
Sbjct: 237 WDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSL 296

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I G     RLD+A  MF  M   G   D V+Y+ +++ Y K  + E  + +  EM   G
Sbjct: 297 LIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           + ++ VTY  L+ GY + GK +    +F+ M    V PN++TY+ L+      G  ++A+
Sbjct: 357 VVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKAL 416

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            I  + +++G+ AD+V Y+ +I  +CK G V  A  L   +  +G+ P++ TY +++
Sbjct: 417 VILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMM 473



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 171/333 (51%), Gaps = 3/333 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  +F+  +  GY   V  ++ +I    +S     A+ + N M+   ++P+ VTYN++I 
Sbjct: 170 ALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLIS 229

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
             C  G  D      +   M +  + PD  TFN+L+  C + G    A  L+ EM+ R +
Sbjct: 230 GLCNSGRWD--DATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSL 287

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
           D DI TY+ L+  +C  +++D A ++   M +K   P+VVTYS +I+GY K+ +++  + 
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +F EM   G+  + V+Y  ++  Y + G+   A  + K M   G+  + +TYN LL G  
Sbjct: 348 LFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLC 407

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
             GK ++   +   M+   +  +++TY+ +I    K G   +A  ++      GL  D+ 
Sbjct: 408 DNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIW 467

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            Y+A++  L K GL   A +L  +M ++GI PN
Sbjct: 468 TYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 194/421 (46%), Gaps = 66/421 (15%)

Query: 276 GGVDFKHVVEIFDDMLRNGVQ--------------------PDRITFNSLLAVCSRGGLW 315
           GG D++       +MLRNG++                    P    F+ LL+  S+   +
Sbjct: 45  GGSDYR-------EMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKY 97

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +    L+ +M   GI  ++ T N LL+  C+ +Q+ LA   + +M      P++VT+ ++
Sbjct: 98  DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSL 157

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ++G+ +  R+ DAL MF  M  +G   + V YNT++    K  + + AL +   ME  GI
Sbjct: 158 LNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGI 217

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R DAVTYN+L+ G    G++D+  RM   M    + P++ T++ LID   K G   EA +
Sbjct: 218 RPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEE 277

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           ++ E  +  L  D+V YS LI  LC    ++ A  +   M  +G  P+VVTY+ +I+ + 
Sbjct: 278 LYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYC 337

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF---GQL-VAE 611
           +S   E                  +   C    + V     T   +I+ +   G+L VAE
Sbjct: 338 KSKKVE----------------HGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAE 381

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +                   +F+ M    + PN++T++ +L+        E A ++L ++
Sbjct: 382 E-------------------IFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADM 422

Query: 672 R 672
           +
Sbjct: 423 Q 423



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 172/312 (55%), Gaps = 3/312 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I  L +  +VD A ++      +G       +++LIS    SG   +A  + + M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCM 247

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGG 313
            +  + P++ T+NA+IDAC K G       E++++M+R  + PD +T++ L+  +C    
Sbjct: 248 TKREIYPDVFTFNALIDACVKEG-RISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           L EA + +F  MV +G   D+ TY+ L++  CK  +++   ++  EM  + +  N VTY+
Sbjct: 307 LDEAEQ-MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I GY +AG+L+ A  +F  M F G+  + ++YN +L      G+ E+AL++  +M+ S
Sbjct: 366 VLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKS 425

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G+  D VTYN ++ G  K G+  +   ++  +    ++P++ TY+ ++    K GL  EA
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEA 485

Query: 494 MQIFREFKQAGL 505
             +FR+ K+ G+
Sbjct: 486 DALFRKMKEDGI 497



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 161/313 (51%), Gaps = 1/313 (0%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +++ +F  M +    P++  ++ ++ A  K    +  V+ +++ M   G+  +  T N L
Sbjct: 64  DSLDLFFHMVQCRPLPSIADFSRLLSAISKMK-KYDVVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           L    R      A +   +M+  G + DI T+ +LL+  C+G ++  A  +   M     
Sbjct: 123 LNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGY 182

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            PNVV Y+T+IDG  K+ ++D+AL++ + M+  GI  D V+YN+++S     GR+++A  
Sbjct: 183 EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATR 242

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           +   M    I  D  T+NAL+    K+G+  E   ++E+M    + P+++TYS LI    
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
                 EA Q+F      G   DVV YS LI+  CK+  VE  + L  EM++ G+  N V
Sbjct: 303 MYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362

Query: 546 TYNSIIDAFGRSA 558
           TY  +I  + R+ 
Sbjct: 363 TYTVLIQGYCRAG 375



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 149/333 (44%), Gaps = 42/333 (12%)

Query: 144 DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           D+L + E      D  T+  L+  L N G W  A +  +   KRE   +           
Sbjct: 207 DLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPD----------- 255

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
                                     V+ F+ALI A  + G   EA  ++  M R +L P
Sbjct: 256 --------------------------VFTFNALIDACVKEGRISEAEELYEEMIRRSLDP 289

Query: 262 NLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           ++VTY+ +I   C    +D     ++F  M+  G  PD +T++ L+    +    E    
Sbjct: 290 DIVTYSLLIYGLCMYSRLD--EAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           LF EM  RG+ ++  TY  L+   C+  ++++A EI   M    + PN++TY+ ++ G  
Sbjct: 348 LFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLC 407

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
             G+++ AL + ++M+  G+  D V+YN ++    K G   +A  +   +   G+  D  
Sbjct: 408 DNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIW 467

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           TY A++ G  K+G   E   +F +MK D + PN
Sbjct: 468 TYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 181/342 (52%), Gaps = 6/342 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
            S L+  Y  S   Q+AI VF  M+ +  KP+L     ++++  K  +    V +++  M
Sbjct: 130 LSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLT-NMVWKVYKKM 188

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           +R GV P+   FN L+  C + G  E A  L NEM  R I  D+FTYNTL+   CK    
Sbjct: 189 VRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMH 248

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
             A  I   M    +SP++VTY+++I G+ + GR+ +AL +F E+   G   + V+Y T+
Sbjct: 249 YEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTL 306

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +  Y ++   EEAL + + ME  G+    VTYN++L    ++GK  +  R+  +M    V
Sbjct: 307 IDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKV 366

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            P+ +T +TLI+ Y K G    AM++ ++  +AGLK D   + ALI   CK   V+SA  
Sbjct: 367 EPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKE 426

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV---DDVER 569
            L EM   G  P+  TY+ ++D++      E  +   D++ R
Sbjct: 427 FLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSR 468



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 197/378 (52%), Gaps = 8/378 (2%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +++ L +    ++   +++  +  G    ++ F+ LI A  +SG  ++A  + N M+
Sbjct: 165 CTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEME 224

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
              + P+L TYN +I    K G+ ++  + I D M R GV PD +T+NSL+   C  G +
Sbjct: 225 SRFIFPDLFTYNTLISLYCKKGMHYE-ALGIQDRMERGGVSPDIVTYNSLIYGFCREGRM 283

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA R LF E+   G   +  TY TL+D  C+   ++ A  +   M  + + P VVTY++
Sbjct: 284 REALR-LFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNS 340

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++    + G++ DA  + +EM    +  D V+ NT+++ Y K+G    A+ V K+M  +G
Sbjct: 341 ILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG 400

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++ D  T+ AL+ G+ K  + D  +    +M     SP+  TYS L+D Y      +  +
Sbjct: 401 LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVI 460

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++  E  + GL  D+ +Y ALI  LCK   +ESA  +   M  +G++ + V Y S+  A+
Sbjct: 461 RLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAY 520

Query: 555 ---GRSATTECTVDDVER 569
              G++      +D++++
Sbjct: 521 FKAGKAIAASDMLDEMDK 538



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 159/304 (52%), Gaps = 12/304 (3%)

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT--FNSLLAVCSRG 312
           K++    NL+   AV D      V    VV I DD       PD  +   + L+   +  
Sbjct: 89  KQFKTAQNLLERIAVRDYLSSPSV-LNAVVRIHDD-------PDSNSQILSWLVIFYANS 140

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            + + A  +F  M   G    +     LL+++ K    ++ +++  +M    + PN+  +
Sbjct: 141 RMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF 200

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +I    K+G ++ A  + +EM+   I  D  +YNT++S+Y K G   EAL +   ME 
Sbjct: 201 NVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMER 260

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G+  D VTYN+L+ G+ ++G+  E  R+F ++     +PN +TY+TLID Y +    +E
Sbjct: 261 GGVSPDIVTYNSLIYGFCREGRMREALRLFREING--ATPNHVTYTTLIDGYCRVNDLEE 318

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A+++    +  GL   VV Y++++  LC+ G ++ A  LL+EM++  + P+ VT N++I+
Sbjct: 319 ALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLIN 378

Query: 553 AFGR 556
           A+ +
Sbjct: 379 AYCK 382



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 150/319 (47%), Gaps = 33/319 (10%)

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A ++   M      P++   + +++  AKA   +    ++ +M  +G+  +   +N ++ 
Sbjct: 146 AIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIH 205

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              K G  E+A  +  EMES  I  D  TYN L+  Y K+G + E   + ++M+   VSP
Sbjct: 206 ACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSP 265

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           +++TY++LI  + + G  +EA+++FRE    G   + V Y+ LID  C+   +E A+ L 
Sbjct: 266 DIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEALRLR 323

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQ 592
           + M  EG+ P VVTYNSI+    R    E  + D  R L +  E            + V+
Sbjct: 324 EVMEVEGLHPGVVTYNSIL----RKLCEEGKIKDANRLLNEMSE------------RKVE 367

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
               T N +I  + ++     G   K             V +KM +  +KP+  TF A++
Sbjct: 368 PDNVTCNTLINAYCKI--GDMGSAMK-------------VKKKMLEAGLKPDQFTFKALI 412

Query: 653 NACSRCNSFEDASMLLEEL 671
           +   + +  + A   L E+
Sbjct: 413 HGFCKLHEVDSAKEFLFEM 431



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 5/291 (1%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    +  +++LI  + R G  +EA+ +F  +      PN VTY  +ID   +   D + 
Sbjct: 262 GVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVN-DLEE 318

Query: 283 VVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            + + + M   G+ P  +T+NS+L  +C  G + +A R L NEM  R ++ D  T NTL+
Sbjct: 319 ALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANR-LLNEMSERKVEPDNVTCNTLI 377

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           +A CK   M  A ++  +M    + P+  T+  +I G+ K   +D A     EM   G  
Sbjct: 378 NAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFS 437

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
               +Y+ ++  Y      E  + +  E+   G+  D   Y AL+    K  K +   R+
Sbjct: 438 PSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERI 497

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           F  M+   +  + + Y++L   Y K G    A  +  E  +  L   + +Y
Sbjct: 498 FTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 35/259 (13%)

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           YA     ++A+ V + M   G +        LL    K    + V +++++M    V PN
Sbjct: 137 YANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPN 196

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           +  ++ LI    K G  ++A Q+  E +   +  D+  Y+ LI   CK G+   A+ + D
Sbjct: 197 IHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQD 256

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
            M + G+ P++VTYNS+I  F R               G+ +E+  L           + 
Sbjct: 257 RMERGGVSPDIVTYNSLIYGFCRE--------------GRMREALRLFR---------EI 293

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKIKPNVVTFSAIL 652
            G T N +   +  L+         E   R +E++ + G         + P VVT+++IL
Sbjct: 294 NGATPNHV--TYTTLIDGYCRVNDLEEALRLREVMEVEG---------LHPGVVTYNSIL 342

Query: 653 NACSRCNSFEDASMLLEEL 671
                    +DA+ LL E+
Sbjct: 343 RKLCEEGKIKDANRLLNEM 361



 Score = 45.8 bits (107), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 48/232 (20%), Positives = 95/232 (40%), Gaps = 5/232 (2%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL-ASAMISILGRLGKVDLAK 213
           G   Y  +LR+L   G+   A +      +  ERK +   +  + +I+   ++G +  A 
Sbjct: 334 GVVTYNSILRKLCEEGKIKDANRLLN---EMSERKVEPDNVTCNTLINAYCKIGDMGSAM 390

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
            + +  L  G     + F ALI  + +      A      M      P+  TY+ ++D+ 
Sbjct: 391 KVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSY 450

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
                + + V+ + D++ R G+  D   + +L+    +    E+A  +F  M  +G+  D
Sbjct: 451 YDQD-NKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGD 509

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              Y +L  A  K  +   A +++ EM  + +   +  Y      YA  G +
Sbjct: 510 SVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSI 561


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 226/470 (48%), Gaps = 46/470 (9%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD A + F   L   +   +  F+ ++ ++ +  +   A+S+ + ++   ++P+L+T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           +I+  C  G + F     +   +L+ G  PD +T N+L+      G  + A +  ++++ 
Sbjct: 100 LINCFCHMGQITFG--FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           +G   +  +Y TL++ +CK      A +++ ++  +   PNV  YST+ID   K   + +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 217

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +FSEM   GI  D V+Y+T++  +   G+ +EA+ +  EM    I  +  TYN L+ 
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
              K+GK  E + +   M   CV P+++TYSTL+D Y      K+A  +F      G+  
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD-- 565
           DV  Y+ LI+  CKN +V+ A++L  EM ++ + P +VTY+S+ID   +S       D  
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397

Query: 566 DVERDLGKQKE----SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
           D  RD G+  +    S+ +D +C          G  D  I                    
Sbjct: 398 DEMRDRGQPADVITYSSLIDGLCKN--------GHLDRAI-------------------- 429

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                     +F KM   +I+PN+ TF+ +L+   +    +DA  + ++L
Sbjct: 430 ---------ALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 193/387 (49%), Gaps = 44/387 (11%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V  A +  +  L +G+     +++ LI+   + G  + AI +   +     KPN+  Y
Sbjct: 143 GQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMY 202

Query: 267 NAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
           + +IDA  K    ++ V E   +F +M   G+  D +T+++L+   C  G L EA   L 
Sbjct: 203 STIIDALCK----YQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAI-GLL 257

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY--- 379
           NEMV + I+ +++TYN L+DA+CK  ++  A  ++A M    + P+V+TYST++DGY   
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLV 317

Query: 380 --------------------------------AKAGRLDDALNMFSEMKFLGIGLDRVSY 407
                                            K   +D+ALN+F EM    +    V+Y
Sbjct: 318 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           ++++    K GR      +  EM   G   D +TY++L+ G  K G  D    +F +MK 
Sbjct: 378 SSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD 437

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + PN+ T++ L+D   KGG  K+A ++F++    G   +V  Y+ +I+  CK GL+E 
Sbjct: 438 QEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 497

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           A+++L +M   G  PN  T+ +II A 
Sbjct: 498 ALTMLSKMEDNGCIPNAFTFETIIIAL 524



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 189/383 (49%), Gaps = 5/383 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  +   G+   AI+       R  + N +  + S +I  L +   V  A  +F  
Sbjct: 167 YATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVE--MYSTIIDALCKYQLVSEAYGLFSE 224

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
              +G    V  +S LI  +   G  +EAI + N M    + PN+ TYN ++DA C +G 
Sbjct: 225 MTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           V  K    +   ML+  V+PD IT+++L+         + A+++FN M   G+  D+ TY
Sbjct: 285 V--KEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTY 342

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             L++  CK   +D A  +  EM  KN+ P +VTYS++IDG  K+GR+    ++  EM+ 
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRD 402

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   D ++Y++++    K G  + A+ +  +M+   IR +  T+  LL G  K G+  +
Sbjct: 403 RGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKD 462

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            + +F+ +       N+ TY+ +I+ + K GL +EA+ +  + +  G   +   +  +I 
Sbjct: 463 AQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIII 522

Query: 518 ALCKNGLVESAVSLLDEMTKEGI 540
           AL K    + A  LL +M   G+
Sbjct: 523 ALFKKDENDKAEKLLRQMIARGL 545



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 80/368 (21%), Positives = 137/368 (37%), Gaps = 78/368 (21%)

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +DDA++ F+ M  +      + +N +L  +AK+  +  A+ +   +E  GI+ D +T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+  +   G+      +  ++      P+ +T +TLI      G  K+A+    +    G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
            + + V Y+ LI+ +CK G    A+ LL ++     +PNV  Y++II             
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTII------------- 206

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                           DA+C                      QLV+E             
Sbjct: 207 ----------------DALCKY--------------------QLVSEA------------ 218

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE--LRLFDNQVYGVA 682
                 G+F +M    I  +VVT+S ++         ++A  LL E  L+  +  VY   
Sbjct: 219 -----YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTY- 272

Query: 683 HGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
                    NI V AL    +VK   S  A      +   +  +        +V E K+ 
Sbjct: 273 ---------NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 743 QVWENVWS 750
           Q   N  S
Sbjct: 324 QHVFNAMS 331


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 183/336 (54%), Gaps = 7/336 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A ++F+  + EG+   V  +  L++   + G    AI +  SM + N +PN++ Y
Sbjct: 196 GKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAY 255

Query: 267 NAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           N +ID+  K     + V E   +F +M+  G+ PD  T+NSL+        W+    L N
Sbjct: 256 NTIIDSLCKD----RQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLN 311

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EMV+  I  ++  ++T++DA+CK   + +A +++  M  + + P+VVTY+ ++DG+    
Sbjct: 312 EMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRS 371

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            +D+A+ +F  M   G   +  SYN +++ Y ++ R ++A+ + ++M   G+  D VTYN
Sbjct: 372 EMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYN 431

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+ G    G+      +F +M A    P+L+TY  L+D   K     EAM + +  + +
Sbjct: 432 TLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS 491

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
            L AD+++Y+  ID +C+ G +E+A  L   ++ +G
Sbjct: 492 NLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 178/360 (49%), Gaps = 16/360 (4%)

Query: 228 VYAFSALISAYG---RSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHV 283
           VY  + LI+++    R GY   A SV   + +   +P+  T+N +I   C +G +     
Sbjct: 147 VYTLNILINSFCHLRRLGY---AFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIG--EA 201

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           + +FD  +  G QPD +T+ +L+    + G   AA  L   MV +    ++  YNT++D+
Sbjct: 202 LHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDS 261

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +CK  Q+  AF + +EM  K ISP++ TY+++I              + +EM    I  +
Sbjct: 262 LCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 321

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V ++TV+    K G    A  V   M   G+  D VTY AL+ G+  + + DE  ++F+
Sbjct: 322 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 381

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
            M      PN+ +Y+ LI+ Y +     +AM +  +    GL AD V Y+ LI  LC  G
Sbjct: 382 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 441

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS-ATTECTVDDVERDLGKQKESANLDA 582
            ++ A++L  EM   G  P++VTY  ++D   ++    E  V      L K  E +NLDA
Sbjct: 442 RLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMV------LLKAIEGSNLDA 495



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 178/357 (49%), Gaps = 7/357 (1%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDL 211
           C  D+ TF  L+R L   G+  +A+  F   +  E  + D     + M + L ++G    
Sbjct: 178 CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG-EGFQPDVVTYGTLM-NGLCKVGNTSA 235

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  +  + + +     V A++ +I +  +     EA ++F+ M    + P++ TYN++I 
Sbjct: 236 AIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIH 295

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           A C     ++KHV  + ++M+ + + P+ + F++++    + G+   A ++ + M+ RG+
Sbjct: 296 ALCNL--CEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGV 353

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
           + D+ TY  L+D  C  ++MD A ++   M  K   PNV +Y+ +I+GY +  R+D A+ 
Sbjct: 354 EPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMG 413

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +  +M   G+  D V+YNT++     +GR + A+ +  EM +SG   D VTY  LL    
Sbjct: 414 LLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLC 473

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           K     E   + + ++   +  ++L Y+  ID   + G  + A  +F      G  A
Sbjct: 474 KNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGFAA 530



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 138/267 (51%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F+ ML     P  + F  LL   ++   +    +L  +M   GI  D++T N L+++ C 
Sbjct: 100 FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 159

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  AF ++A++      P+  T++T+I G    G++ +AL++F +    G   D V+
Sbjct: 160 LRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVT 219

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T+++   K+G    A+ + + M     R + + YN ++    K  +  E   +F +M 
Sbjct: 220 YGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI 279

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              +SP++ TY++LI        +K    +  E   + +  +VV++S ++DALCK G++ 
Sbjct: 280 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIA 339

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            A  ++D M K G+ P+VVTY +++D 
Sbjct: 340 IAHDVVDMMIKRGVEPDVVTYTALMDG 366



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/427 (22%), Positives = 182/427 (42%), Gaps = 24/427 (5%)

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           FN M+H         +  LL +I K         +  +M +  I P+V T + +I+ +  
Sbjct: 100 FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 159

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
             RL  A ++ +++  LG   D  ++NT++      G+  EAL +  +    G + D VT
Sbjct: 160 LRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVT 219

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  L+ G  K G      R+   M      PN++ Y+T+ID   K     EA  +F E  
Sbjct: 220 YGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI 279

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G+  D+  Y++LI ALC     +   +LL+EM    I PNVV +++++DA  +     
Sbjct: 280 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIA 339

Query: 562 CTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
              D V+  + +  E      +A +D  C + + D         + +KVF  +V +    
Sbjct: 340 IAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMD---------EAVKVFDTMVHKGCVP 390

Query: 616 GKKE------NRCR-QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
             +         C+ Q +   +G+ ++M    +  + VT++ +++        + A  L 
Sbjct: 391 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 450

Query: 669 EELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHF 726
            E+         V + +L+ Y  +++   +A+ L   ++  +       YN   D +   
Sbjct: 451 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 510

Query: 727 GQKRGAQ 733
           G+   A+
Sbjct: 511 GELEAAR 517


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 151/561 (26%), Positives = 260/561 (46%), Gaps = 26/561 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI +L +  ++D A  +FE           YA++ +I  YG +G   EA S+    + 
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336

Query: 257 YNLKPNLVTYNAVIDACGK-GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               P+++ YN ++    K G VD    +++F++M ++   P+  T+N L+ +  R G  
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVD--EALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKL 393

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  L + M   G+  ++ T N ++D +CK  ++D A  +  EM  K  +P+ +T+ ++
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K GR+DDA  ++ +M       + + Y +++  +   GR E+   + K+M +   
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D    N  +    K G+ ++ R MFE++KA    P+  +YS LI    K G   E  +
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F   K+ G   D   Y+ +ID  CK G V  A  LL+EM  +G  P VVTY S+ID   
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
           +    +      E    K+ E  N+    S  D    + GR D   +     ++ E   +
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIE-LNVVIYSSLID-GFGKVGRIDEAYL-----ILEELMQK 686

Query: 616 GKKENRCR-----------QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           G   N              +EI   L  FQ M +LK  PN VT+  ++N   +   F  A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746

Query: 665 SMLLEELRLFDNQVYGVAHGLL---MGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
            +  +E++    +   +++  +   +    NI  +A +LFD  K       SA YNA+ +
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNI-AEAGALFDRFKANGGVPDSACYNAMIE 805

Query: 722 MLWHFGQKRGAQLVVLEGKRR 742
            L +  +   A  +  E +RR
Sbjct: 806 GLSNGNRAMDAFSLFEETRRR 826



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 197/437 (45%), Gaps = 43/437 (9%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASA---MISILGRLGKVDLAKNI 215
           Y  +L  L   G+  +A++ F      EE K D     S    +I +L R GK+D A  +
Sbjct: 346 YNCILTCLRKMGKVDEALKVF------EEMKKDAAPNLSTYNILIDMLCRAGKLDTAFEL 399

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
            ++    G    V   + ++    +S    EA ++F  M      P+ +T+ ++ID  GK
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459

Query: 276 -GGVDFKHVV---------------------------------EIFDDMLRNGVQPDRIT 301
            G VD  + V                                 +I+ DM+     PD   
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQL 519

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
            N+ +    + G  E  R +F E+  R    D  +Y+ L+  + K    +  +E+   M 
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            +    +   Y+ +IDG+ K G+++ A  +  EMK  G     V+Y +V+   AK+ R +
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           EA ++ +E +S  I  + V Y++L+ G+GK G+ DE   + E++    ++PNL T+++L+
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           D   K     EA+  F+  K+     + V Y  LI+ LCK      A     EM K+G++
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759

Query: 542 PNVVTYNSIIDAFGRSA 558
           P+ ++Y ++I    ++ 
Sbjct: 760 PSTISYTTMISGLAKAG 776



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/491 (22%), Positives = 231/491 (47%), Gaps = 25/491 (5%)

Query: 197 SAMISILGRLGKV---DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           SA  +++G    V   D+   +F+     GY  TV+ F+ LI  + + G    A+S+ + 
Sbjct: 169 SAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228

Query: 254 MKRYNLKPNLVTYNAVIDACGK-GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           MK  +L  ++V YN  ID+ GK G VD     + F ++  NG++PD +T+ S++ V  + 
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAW--KFFHEIEANGLKPDEVTYTSMIGVLCKA 286

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              + A  +F  +         + YNT++       + D A+ ++    AK   P+V+ Y
Sbjct: 287 NRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAY 346

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + ++    K G++D+AL +F EMK      +  +YN ++ +  + G+ + A  +   M+ 
Sbjct: 347 NCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           +G+  +  T N ++    K  K DE   MFE+M     +P+ +T+ +LID   K G   +
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDD 465

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A +++ +   +  + + ++Y++LI     +G  E    +  +M  +   P++   N+ +D
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525

Query: 553 AFGRSATTE---CTVDDVE-RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
              ++   E      ++++ R       S ++          + +AG   N+  ++F  +
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI------HGLIKAGFA-NETYELFYSM 578

Query: 609 VAEKAGQGKKENRCRQEILCILG----VFQKMHKLKIK---PNVVTFSAILNACSRCNSF 661
             +      +      +  C  G     +Q + ++K K   P VVT+ ++++  ++ +  
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638

Query: 662 EDASMLLEELR 672
           ++A ML EE +
Sbjct: 639 DEAYMLFEEAK 649



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 206/438 (47%), Gaps = 7/438 (1%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           + ++ ++K+C  D+ TF  L+  LG  G    A + +   +  + R N    + +++I  
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTN--SIVYTSLIKN 491

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
               G+ +    I++  +N+     +   +  +    ++G  ++  ++F  +K     P+
Sbjct: 492 FFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
             +Y+ +I    K G       E+F  M   G   D   +N ++    + G    A  L 
Sbjct: 552 ARSYSILIHGLIKAGFA-NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            EM  +G +  + TY +++D + K  ++D A+ +  E  +K I  NVV YS++IDG+ K 
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           GR+D+A  +  E+   G+  +  ++N++L    K     EAL+  + M+      + VTY
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             L+ G  K  K+++    +++M+   + P+ ++Y+T+I   +K G   EA  +F  FK 
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE- 561
            G   D   Y+A+I+ L        A SL +E  + G+  +  T   ++D   ++   E 
Sbjct: 791 NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQ 850

Query: 562 -CTVDDVERDLGKQKESA 578
              V  V R+ GK + +A
Sbjct: 851 AAIVGAVLRETGKARHAA 868



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 132/606 (21%), Positives = 257/606 (42%), Gaps = 80/606 (13%)

Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETAL 220
           F++  L    + ++AI+ F +  +R E  +      S ++ ++ R    D    I     
Sbjct: 67  FVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLL-VMARCRNFDALDQILGEMS 125

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDF 280
             G+G +V     ++    ++   +E   V   M+++  +P    Y  +I A        
Sbjct: 126 VAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFS------ 179

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
              V   D ML                             LF +M   G +  +  + TL
Sbjct: 180 --AVNHSDMML----------------------------TLFQQMQELGYEPTVHLFTTL 209

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +    K  ++D A  ++ EM + ++  ++V Y+  ID + K G++D A   F E++  G+
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D V+Y +++ +  K  R +EA+ + + +E +        YN ++ GYG  GK+DE   
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + E+ +A    P+++ Y+ ++    K G   EA+++F E K+     ++  Y+ LID LC
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLC 388

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE-------------CTVDDV 567
           + G +++A  L D M K G+ PNV T N ++D   +S   +             CT D++
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448

Query: 568 E-----RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
                   LGK      +D      +K +    RT N I  V+  L+      G+KE+  
Sbjct: 449 TFCSLIDGLGK---VGRVDDAYKVYEKMLDSDCRT-NSI--VYTSLIKNFFNHGRKEDGH 502

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQV 678
           +        +++ M      P++   +  ++   +    E    + EE++    + D + 
Sbjct: 503 K--------IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 554

Query: 679 YGV-AHGLL-MGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVV 736
           Y +  HGL+  G+ +  +    S+ ++  ++D+      YN + D     G+   A  ++
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA----YNIVIDGFCKCGKVNKAYQLL 610

Query: 737 LEGKRR 742
            E K +
Sbjct: 611 EEMKTK 616



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 112/489 (22%), Positives = 207/489 (42%), Gaps = 36/489 (7%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           +F  + +I  +M   G  P   T   ++  C +        ++   M           Y 
Sbjct: 113 NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYT 172

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+ A       D+   +  +M      P V  ++T+I G+AK GR+D AL++  EMK  
Sbjct: 173 TLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS 232

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            +  D V YN  +  + K+G+ + A     E+E++G++ D VTY +++G   K  + DE 
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             MFE ++ +   P    Y+T+I  Y   G + EA  +    +  G    V+ Y+ ++  
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
           L K G V+ A+ + +EM K+   PN+ TYN +ID   R+              GK   + 
Sbjct: 353 LRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRA--------------GKLDTAF 397

Query: 579 NL-DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
            L D+M        Q+AG   N  ++    +V       K +  C         +F++M 
Sbjct: 398 ELRDSM--------QKAGLFPN--VRTVNIMVDRLCKSQKLDEAC--------AMFEEMD 439

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWV 695
                P+ +TF ++++   +    +DA  + E++   D +   + +  L+   +      
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499

Query: 696 QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLD 755
               ++ ++   + S      N   D ++  G+    + +  E K R+   +  S S L 
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559

Query: 756 LHLMSSGAA 764
             L+ +G A
Sbjct: 560 HGLIKAGFA 568


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 184/346 (53%), Gaps = 13/346 (3%)

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
           AL+ G  N V      ++A    G   EA+ +   +  +  +P++V+YNAV+    KG  
Sbjct: 189 ALDVGNCNLV------LNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVL----KGLC 238

Query: 279 DFKH---VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
             K    V E+ ++M+R    P+ +TFN+L++   R GL+E    +  +MV  G   DI 
Sbjct: 239 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIR 298

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            Y T++D ICK   +++A EI+  MP+  + PNVV Y+T++ G   A R ++   + +EM
Sbjct: 299 MYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
                 LD V++N ++  + + G  +  + + ++M   G   D +TY  ++ G+ K+G  
Sbjct: 359 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLI 418

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           DE   + + M A    PN ++Y+ ++        + +A  +  +  Q G   + + ++ L
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           I+ LCK GLVE A+ LL +M   G  P++++Y+++ID  G++  T+
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 178/355 (50%), Gaps = 1/355 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS L R G  +    +    +  G    +  ++ +I    + G+ + A  + N M  
Sbjct: 266 NTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS 325

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           Y LKPN+V YN ++         ++   E+  +M       D +TFN L+    + GL +
Sbjct: 326 YGLKPNVVCYNTLLKGLCSAE-RWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD 384

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               L  +M+ RG   D+ TY T+++  CK   +D A  ++  M A    PN ++Y+ ++
Sbjct: 385 RVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVL 444

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G   A R  DA ++ S+M   G  L+ +++NT+++   K G  E+A+ + K+M  +G  
Sbjct: 445 KGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCS 504

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D ++Y+ ++ G GK GK DE   +   M    +SPN + YS++    S+ G   + +Q+
Sbjct: 505 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQM 564

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           F   +   +++D VLY+A+I +LCK G  E A+  L  M   G  PN  TY  +I
Sbjct: 565 FDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 619



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 168/335 (50%), Gaps = 3/335 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           +  F+ LIS   R+G  +    V   M  +   P++  Y  +ID  C +G ++  H  EI
Sbjct: 262 IVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAH--EI 319

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
            + M   G++P+ + +N+LL        WE    L  EM  +    D  T+N L+D  C+
Sbjct: 320 LNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQ 379

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +D   E++ +M  +   P+V+TY+T+I+G+ K G +D+A+ +   M   G   + +S
Sbjct: 380 NGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS 439

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y  VL       R+ +A  +  +M   G   + +T+N L+    K+G  ++   + +QM 
Sbjct: 440 YTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML 499

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            +  SP+L++YST+ID   K G   EA+++       G+  + ++YS++  AL + G + 
Sbjct: 500 VNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRIN 559

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             + + D +    IR + V YN++I +  +   TE
Sbjct: 560 KVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 594



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 164/327 (50%), Gaps = 6/327 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           ++A+++ Y R+G  + A  +  ++    + PN  TY  V+ A C +G +     + + D+
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRI--ADALAVLDE 147

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M R G  P    ++ +L    RGG + +A  +  ++  RG   D+   N +L+AIC    
Sbjct: 148 MPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGS 207

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A  ++ ++P+    P+VV+Y+ ++ G   A R      +  EM  +    + V++NT
Sbjct: 208 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++S   + G FE    V  +M   G   D   Y  ++ G  K+G  +    +  +M +  
Sbjct: 268 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 327

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + PN++ Y+TL+        ++E  ++  E        D V ++ L+D  C+NGLV+  +
Sbjct: 328 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 387

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            LL++M + G  P+V+TY ++I+ F +
Sbjct: 388 ELLEQMLERGCMPDVITYTTVINGFCK 414



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 142/275 (51%), Gaps = 3/275 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           F+ L+  + ++G     I +   M      P+++TY  VI+  C +G +D    V +   
Sbjct: 370 FNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLID--EAVMLLKS 427

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G +P+ I++  +L        W  A +L ++M+ +G   +  T+NTL++ +CK   
Sbjct: 428 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 487

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++ A E++ +M     SP++++YST+IDG  KAG+ D+AL + + M   G+  + + Y++
Sbjct: 488 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 547

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           + S  ++ GR  + + +   ++ + IR DAV YNA++    K+G+ +        M +  
Sbjct: 548 IASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG 607

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
             PN  TY+ LI   +  G  KEA ++  E    G
Sbjct: 608 CVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/431 (23%), Positives = 198/431 (45%), Gaps = 42/431 (9%)

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           +N+++A   R G  E+AR L   +    +  + +TY  ++ A+C   ++  A  ++ EMP
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            +  +P    Y  +++   + G    A+ +  ++   G  LD  + N VL+     G  +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           EAL + +++ S G   D V+YNA+L G     ++  V+ + E+M      PN++T++TLI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
               + GL++   ++  +  + G   D+ +Y+ +ID +CK G +E A  +L+ M   G++
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
           PNVV YN+++          C+ +       + +E+  L A     DKD      T N +
Sbjct: 330 PNVVCYNTLLKGL-------CSAE-------RWEETEELLA--EMFDKDCPLDDVTFNIL 373

Query: 602 IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
           +  F Q        G  +         ++ + ++M +    P+V+T++ ++N   +    
Sbjct: 374 VDFFCQ-------NGLVDR--------VIELLEQMLERGCMPDVITYTTVINGFCKEGLI 418

Query: 662 EDASMLLEELRLFDNQVYGVAH-----GLLMGYRDNIWVQALSLFDEVKLMDSSTASAFY 716
           ++A MLL+ +     +   +++     GL    R   WV A  L  ++           +
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAER---WVDAEDLMSQMIQQGCPLNPITF 475

Query: 717 NALTDMLWHFG 727
           N L + L   G
Sbjct: 476 NTLINFLCKKG 486


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 218/464 (46%), Gaps = 42/464 (9%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +S LI  + R G  +   + F  + +   + N++    VI    KG  D K V E  D +
Sbjct: 93  YSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVI----VISQLLKGLCDAKRVDEATDIL 148

Query: 291 LRN----GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           L      G  PD + +N+++    R G  E A NLF EM+ +GI  ++ TY T++D +CK
Sbjct: 149 LLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCK 208

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +D A  +  +M  + + P+  TY+ +I GY   G+  + + M  EM   G+  D ++
Sbjct: 209 AQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCIT 268

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y  +L    K GR  EA L    M   GI+ D   Y  LL GY  +G   E+    + M 
Sbjct: 269 YALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMV 328

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            + VSPN   ++ +   Y+K  + +EAM IF + +Q GL  DVV + ALIDALCK G V+
Sbjct: 329 GNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVD 388

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER---------DLGKQKES 577
            AV   ++M  EG+ PN+  ++S++          CTV   E+         D G   ++
Sbjct: 389 DAVLQFNQMINEGVTPNIFVFSSLVYGL-------CTVGKWEKAEELFFEVLDQGICVDA 441

Query: 578 ANLDA-MCSQ-DDKDVQEAGRTDNQIIKV--------FGQLVAEKAGQGKKENRCRQEIL 627
              +  MC+  ++  V EA R  + +I+V        +  LVA     G+ +   +    
Sbjct: 442 VFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAK---- 497

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               +   M    +KPN  T++ +L    +    +DA  L  E+
Sbjct: 498 ----LLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREM 537



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 192/397 (48%), Gaps = 4/397 (1%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
           A  Y+ L+      G        F   +K   R N    + S ++  L    +VD A +I
Sbjct: 90  ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNV--IVISQLLKGLCDAKRVDEATDI 147

Query: 216 FETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
               ++E G    V A++ +I+ + R G  ++A ++F  M    + PN+VTY  VID   
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLC 207

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K  V       +F  M+  GV+PD  T+N L+      G W+    +  EM   G++ D 
Sbjct: 208 KAQV-VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDC 266

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TY  LLD +CK  +   A      M  K I P+V  Y+ ++ GYA  G L +  +    
Sbjct: 267 ITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDL 326

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G+  +R  +N +   YAK    EEA+ +  +M   G+  D V++ AL+    K G+
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            D+    F QM  + V+PN+  +S+L+      G +++A ++F E    G+  D V ++ 
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNT 446

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           L+  LC  G V  A  L+D M + G+RPNV++YN+++
Sbjct: 447 LMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLV 483



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 167/321 (52%), Gaps = 3/321 (0%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           F+ +  AY +    +EA+ +FN M++  L P++V++ A+IDA C  G VD    V  F+ 
Sbjct: 339 FNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVD--DAVLQFNQ 396

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M+  GV P+   F+SL+      G WE A  LF E++ +GI  D   +NTL+  +C   +
Sbjct: 397 MINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGR 456

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  A  ++  M    + PNV++Y+T++ G+   GR+D+A  +   M   G+  +  +Y  
Sbjct: 457 VMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTI 516

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +L  Y K  R ++A  + +EM   G+     TYN +L G  + G++ E   ++  M    
Sbjct: 517 LLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSR 576

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
              ++ TY+ +++   K     EA ++FR       + D V ++ +I AL K G  E A+
Sbjct: 577 TKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAM 636

Query: 530 SLLDEMTKEGIRPNVVTYNSI 550
            L   ++  G+ P+VVTY  I
Sbjct: 637 DLFATISAYGLVPDVVTYRLI 657



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 183/360 (50%), Gaps = 5/360 (1%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           ++ + M     +   ++ A +IF     +G    V +F ALI A  + G   +A+  FN 
Sbjct: 337 RIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQ 396

Query: 254 MKRYNLKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSR 311
           M    + PN+  +++++   C  G   ++   E+F ++L  G+  D + FN+L+  +C+ 
Sbjct: 397 MINEGVTPNIFVFSSLVYGLCTVG--KWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNE 454

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
           G + EA R L + M+  G+  ++ +YNTL+   C   ++D A +++  M +  + PN  T
Sbjct: 455 GRVMEAQR-LIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFT 513

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+ ++ GY KA R+DDA ++F EM   G+     +YNT+L    + GRF EA  +   M 
Sbjct: 514 YTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMI 573

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           +S  + D  TYN +L G  K    DE  +MF ++ +     + +T++ +I    KGG  +
Sbjct: 574 NSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKE 633

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +AM +F      GL  DVV Y  + + L + G +     L   M K G  PN    N+++
Sbjct: 634 DAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALV 693



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 169/328 (51%), Gaps = 3/328 (0%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           ++ L+    ++G C+EA   F+SM R  +KP++  Y  ++     KG +   H     D 
Sbjct: 269 YALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMH--SFLDL 326

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M+ NGV P+R  FN +    ++  + E A ++FN+M  +G+  D+ ++  L+DA+CK  +
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A     +M  + ++PN+  +S+++ G    G+ + A  +F E+   GI +D V +NT
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNT 446

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++      GR  EA  +   M   G+R + ++YN L+ G+   G+ DE  ++ + M ++ 
Sbjct: 447 LMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNG 506

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + PN  TY+ L+  Y K     +A  +FRE    G+   V  Y+ ++  L + G    A 
Sbjct: 507 LKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEAN 566

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            L   M     + ++ TYN I++   ++
Sbjct: 567 ELYLNMINSRTKCDIYTYNIILNGLCKN 594



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 179/355 (50%), Gaps = 1/355 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L +   VD AK +F+  ++ G       ++ LI  Y  +G  +E + +   M  
Sbjct: 200 TTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMST 259

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           + L+P+ +TY  ++D   K G   +     FD M R G++PD   +  LL   +  G   
Sbjct: 260 HGLEPDCITYALLLDYLCKNG-RCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALS 318

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
              +  + MV  G+  +   +N +  A  K A ++ A  I  +M  + +SP+VV++  +I
Sbjct: 319 EMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALI 378

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D   K GR+DDA+  F++M   G+  +   +++++     +G++E+A  +  E+   GI 
Sbjct: 379 DALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGIC 438

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            DAV +N L+     +G+  E +R+ + M    V PN+++Y+TL+  +   G   EA ++
Sbjct: 439 VDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKL 498

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
                  GLK +   Y+ L+   CK   V+ A SL  EM  +G+ P V TYN+I+
Sbjct: 499 LDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTIL 553



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 216/496 (43%), Gaps = 56/496 (11%)

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR---NLFNEMVHR---G 329
           G +     +++FD++L          FN LL V SR G   A+    +LF  M       
Sbjct: 26  GSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSK 85

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  +  TY+ L+   C+  +++  F     +       NV+  S ++ G   A R+D+A 
Sbjct: 86  VAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEAT 145

Query: 390 N-MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           + +   M   G   D V+YNTV++ + + G+ E+A  +  EM   GI  + VTY  ++ G
Sbjct: 146 DILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDG 205

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             K    D  + +F+QM    V P+  TY+ LI  Y   G +KE +Q+  E    GL+ D
Sbjct: 206 LCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPD 265

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG-RSATTECTVDDV 567
            + Y+ L+D LCKNG    A    D M ++GI+P+V  Y  ++  +  + A +E      
Sbjct: 266 CITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSE------ 319

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
                     + LD M           G + N+  ++F  +    A +   E        
Sbjct: 320 --------MHSFLDLMVGN--------GVSPNR--RIFNIMFCAYAKKAMIEE------- 354

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL---------RLFDNQV 678
             + +F KM +  + P+VV+F A+++A  +    +DA +   ++          +F + V
Sbjct: 355 -AMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLV 413

Query: 679 YGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           YG+            W +A  LF EV        + F+N L   L + G+   AQ ++  
Sbjct: 414 YGLCT-------VGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDL 466

Query: 739 GKRRQVWENVWSESCL 754
             R  V  NV S + L
Sbjct: 467 MIRVGVRPNVISYNTL 482



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 182/361 (50%), Gaps = 5/361 (1%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+I  L +LG+VD A   F   +NEG    ++ FS+L+      G  ++A  +F  +   
Sbjct: 376 ALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQ 435

Query: 258 NLKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV-CSRGGLW 315
            +  + V +N ++ + C +G V       + D M+R GV+P+ I++N+L+A  C  G + 
Sbjct: 436 GICVDAVFFNTLMCNLCNEGRV--MEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRID 493

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EAA+ L + MV  G+  + FTY  LL   CK  ++D A+ +  EM  K ++P V TY+T+
Sbjct: 494 EAAK-LLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTI 552

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G  + GR  +A  ++  M       D  +YN +L+   K    +EA  + + + S   
Sbjct: 553 LHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDP 612

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D+VT+N ++G   K G+ ++   +F  + A  + P+++TY  + +   + G   E   
Sbjct: 613 QLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDG 672

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F   +++G   +  + +AL+  L   G +  A   L ++ ++       T + +I  + 
Sbjct: 673 LFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYS 732

Query: 556 R 556
           R
Sbjct: 733 R 733



 Score = 42.7 bits (99), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 57/264 (21%), Positives = 111/264 (42%), Gaps = 17/264 (6%)

Query: 139 DVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCF-AFAVKREERKNDQGKLAS 197
           DV + + LK  EF       YT LLR       + KA +   A+++ RE        + +
Sbjct: 500 DVMVSNGLKPNEFT------YTILLRG------YCKARRVDDAYSLFREMLMKGVTPVVA 547

Query: 198 AMISILGRL---GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
              +IL  L   G+   A  ++   +N      +Y ++ +++   ++ +  EA  +F  +
Sbjct: 548 TYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRL 607

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
              + + + VT+N +I A  KGG   +  +++F  +   G+ PD +T+  +       G 
Sbjct: 608 CSKDPQLDSVTFNIMIGALLKGGRK-EDAMDLFATISAYGLVPDVVTYRLIAENLIEEGS 666

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
                 LF+ M   G   +    N L+  +     +  A   + ++  KN S    T S 
Sbjct: 667 LGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSM 726

Query: 375 MIDGYAKAGRLDDALNMFSEMKFL 398
           +I  Y++      A ++  + +FL
Sbjct: 727 LISLYSRGEYQPHAKSLPEKYRFL 750


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 181/342 (52%), Gaps = 6/342 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
            S L+  Y  S   Q+AI VF  M+ +  KP+L     ++++  K  +    V +++  M
Sbjct: 130 LSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLT-NMVWKVYKKM 188

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           +R GV P+   FN L+  C + G  E A  L NEM  R I  D+FTYNTL+   CK    
Sbjct: 189 VRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMH 248

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
             A  I   M    +SP++VTY+++I G+ + GR+ +AL +F E+   G   + V+Y T+
Sbjct: 249 YEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTL 306

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +  Y ++   EEAL + + ME  G+    VTYN++L    ++GK  +  R+  +M    V
Sbjct: 307 IDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKV 366

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            P+ +T +TLI+ Y K G    AM++ ++  +AGLK D   + ALI   CK   V+SA  
Sbjct: 367 EPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKE 426

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV---DDVER 569
            L EM   G  P+  TY+ ++D++      E  +   D++ R
Sbjct: 427 FLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSR 468



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 197/378 (52%), Gaps = 8/378 (2%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +++ L +    ++   +++  +  G    ++ F+ LI A  +SG  ++A  + N M+
Sbjct: 165 CTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEME 224

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
              + P+L TYN +I    K G+ ++  + I D M R GV PD +T+NSL+   C  G +
Sbjct: 225 SRFIFPDLFTYNTLISLYCKKGMHYE-ALGIQDRMERGGVSPDIVTYNSLIYGFCREGRM 283

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA R LF E+   G   +  TY TL+D  C+   ++ A  +   M  + + P VVTY++
Sbjct: 284 REALR-LFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNS 340

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++    + G++ DA  + +EM    +  D V+ NT+++ Y K+G    A+ V K+M  +G
Sbjct: 341 ILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG 400

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++ D  T+ AL+ G+ K  + D  +    +M     SP+  TYS L+D Y      +  +
Sbjct: 401 LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVI 460

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++  E  + GL  D+ +Y ALI  LCK   +ESA  +   M  +G++ + V Y S+  A+
Sbjct: 461 RLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAY 520

Query: 555 ---GRSATTECTVDDVER 569
              G++      +D++++
Sbjct: 521 FKAGKAIAASDMLDEMDK 538



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 159/304 (52%), Gaps = 12/304 (3%)

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT--FNSLLAVCSRG 312
           K++    NL+   AV D      V    VV I DD       PD  +   + L+   +  
Sbjct: 89  KQFKTAQNLLERIAVRDYLSSPSV-LNAVVRIHDD-------PDSNSQILSWLVIFYANS 140

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            + + A  +F  M   G    +     LL+++ K    ++ +++  +M    + PN+  +
Sbjct: 141 RMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF 200

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +I    K+G ++ A  + +EM+   I  D  +YNT++S+Y K G   EAL +   ME 
Sbjct: 201 NVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMER 260

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G+  D VTYN+L+ G+ ++G+  E  R+F ++     +PN +TY+TLID Y +    +E
Sbjct: 261 GGVSPDIVTYNSLIYGFCREGRMREALRLFREING--ATPNHVTYTTLIDGYCRVNDLEE 318

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A+++    +  GL   VV Y++++  LC+ G ++ A  LL+EM++  + P+ VT N++I+
Sbjct: 319 ALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLIN 378

Query: 553 AFGR 556
           A+ +
Sbjct: 379 AYCK 382



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 150/319 (47%), Gaps = 33/319 (10%)

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A ++   M      P++   + +++  AKA   +    ++ +M  +G+  +   +N ++ 
Sbjct: 146 AIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIH 205

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              K G  E+A  +  EMES  I  D  TYN L+  Y K+G + E   + ++M+   VSP
Sbjct: 206 ACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSP 265

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           +++TY++LI  + + G  +EA+++FRE    G   + V Y+ LID  C+   +E A+ L 
Sbjct: 266 DIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEALRLR 323

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQ 592
           + M  EG+ P VVTYNSI+    R    E  + D  R L +  E            + V+
Sbjct: 324 EVMEVEGLHPGVVTYNSIL----RKLCEEGKIKDANRLLNEMSE------------RKVE 367

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
               T N +I  + ++     G   K             V +KM +  +KP+  TF A++
Sbjct: 368 PDNVTCNTLINAYCKI--GDMGSAMK-------------VKKKMLEAGLKPDQFTFKALI 412

Query: 653 NACSRCNSFEDASMLLEEL 671
           +   + +  + A   L E+
Sbjct: 413 HGFCKLHEVDSAKEFLFEM 431



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 5/291 (1%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    +  +++LI  + R G  +EA+ +F  +      PN VTY  +ID   +   D + 
Sbjct: 262 GVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVN-DLEE 318

Query: 283 VVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            + + + M   G+ P  +T+NS+L  +C  G + +A R L NEM  R ++ D  T NTL+
Sbjct: 319 ALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANR-LLNEMSERKVEPDNVTCNTLI 377

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           +A CK   M  A ++  +M    + P+  T+  +I G+ K   +D A     EM   G  
Sbjct: 378 NAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFS 437

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
               +Y+ ++  Y      E  + +  E+   G+  D   Y AL+    K  K +   R+
Sbjct: 438 PSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERI 497

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           F  M+   +  + + Y++L   Y K G    A  +  E  +  L   + +Y
Sbjct: 498 FTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 35/259 (13%)

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           YA     ++A+ V + M   G +        LL    K    + V +++++M    V PN
Sbjct: 137 YANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPN 196

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           +  ++ LI    K G  ++A Q+  E +   +  D+  Y+ LI   CK G+   A+ + D
Sbjct: 197 IHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQD 256

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
            M + G+ P++VTYNS+I  F R               G+ +E+  L           + 
Sbjct: 257 RMERGGVSPDIVTYNSLIYGFCRE--------------GRMREALRLFR---------EI 293

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKIKPNVVTFSAIL 652
            G T N +   +  L+         E   R +E++ + G         + P VVT+++IL
Sbjct: 294 NGATPNHV--TYTTLIDGYCRVNDLEEALRLREVMEVEG---------LHPGVVTYNSIL 342

Query: 653 NACSRCNSFEDASMLLEEL 671
                    +DA+ LL E+
Sbjct: 343 RKLCEEGKIKDANRLLNEM 361



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 48/232 (20%), Positives = 95/232 (40%), Gaps = 5/232 (2%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL-ASAMISILGRLGKVDLAK 213
           G   Y  +LR+L   G+   A +      +  ERK +   +  + +I+   ++G +  A 
Sbjct: 334 GVVTYNSILRKLCEEGKIKDANRLLN---EMSERKVEPDNVTCNTLINAYCKIGDMGSAM 390

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
            + +  L  G     + F ALI  + +      A      M      P+  TY+ ++D+ 
Sbjct: 391 KVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSY 450

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
                + + V+ + D++ R G+  D   + +L+    +    E+A  +F  M  +G+  D
Sbjct: 451 YDQD-NKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGD 509

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              Y +L  A  K  +   A +++ EM  + +   +  Y      YA  G +
Sbjct: 510 SVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSI 561


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 203/375 (54%), Gaps = 17/375 (4%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +  ++    + G+ Q+A  +   M++   KP+   YN VIDA  K G+       + ++M
Sbjct: 181 YGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGM-LDGATSLLNEM 239

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
            +  + PD IT+ SL+    +   WE  R LF EM+H  I  D+ T+N+++D +CK  ++
Sbjct: 240 KQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKV 299

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           + A EIM  M  K + PN +TY+ ++DGY   G++  A  +F  M   GI  D +SY  +
Sbjct: 300 EDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTAL 359

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           ++ Y +  + ++A+ + +E+  +G++   VT + LL G  + G+ +  +  F++M+A   
Sbjct: 360 INGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGH 419

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            PNL T+ TL+  Y K GL +EAM  F + ++     ++ +Y+A+I+ LCKNG ++ A +
Sbjct: 420 IPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHA 479

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
             +++   G+ P+V+TY ++I  + +         D  +D+ ++ E    D  C  D+  
Sbjct: 480 TFEKLPLIGLHPDVITYTAMISGYCQEGLL-----DEAKDMLRKME----DNGCLPDN-- 528

Query: 591 VQEAGRTDNQIIKVF 605
                RT N I++ F
Sbjct: 529 -----RTYNVIVRGF 538



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 176/328 (53%), Gaps = 1/328 (0%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           ++ +I A+ + G    A S+ N MK+ N+ P+++TY ++ID  GK    ++ V  +F +M
Sbjct: 216 YNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLS-QWEKVRTLFLEM 274

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           +   + PD  TFNS++    + G  E A  +   M+ +G++ +  TYN ++D  C   QM
Sbjct: 275 IHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQM 334

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
             A  I   M  K I P++++Y+ +I+GY +  ++D A+ +F E+   G+    V+ + +
Sbjct: 335 GRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVL 394

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           L    ++GR E A +   EM+++G   +  T+  LLGGY K G  +E    F +++    
Sbjct: 395 LRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRE 454

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
             N+  Y+ +I+   K G   +A   F +    GL  DV+ Y+A+I   C+ GL++ A  
Sbjct: 455 DTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKD 514

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +L +M   G  P+  TYN I+  F RS+
Sbjct: 515 MLRKMEDNGCLPDNRTYNVIVRGFFRSS 542



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 197/406 (48%), Gaps = 36/406 (8%)

Query: 281 KHVVEIFDDMLRNGV-QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
           K  V +F  ++R  + +PD + + +++    + G  + A +L   M       D   YN 
Sbjct: 159 KDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNI 218

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++DA CK   +D A  ++ EM  KNI P+++TY+++IDG  K  + +    +F EM  L 
Sbjct: 219 VIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLN 278

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I  D  ++N+V+    K G+ E+A  +   M   G+  + +TYN ++ GY  +G+    R
Sbjct: 279 IYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRAR 338

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           R+F+ M    + P++++Y+ LI+ Y +     +AMQ+FRE  Q GLK  +V  S L+  L
Sbjct: 339 RIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGL 398

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
            + G  E A    DEM   G  PN+ T+ +++  + ++   E  +    + L +++E  N
Sbjct: 399 FEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHK-LERRREDTN 457

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
                                 I+++  ++      GK +             F+K+  +
Sbjct: 458 ----------------------IQIYTAVINGLCKNGKLDKA--------HATFEKLPLI 487

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGV 681
            + P+V+T++A+++   +    ++A  +L ++     L DN+ Y V
Sbjct: 488 GLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNV 533



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 183/378 (48%), Gaps = 5/378 (1%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I    + G +D A ++      +     +  +++LI   G+    ++  ++F  M
Sbjct: 215 IYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEM 274

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
              N+ P++ T+N+VID  C +G V+     EI   M+  GV+P+ IT+N ++   C RG
Sbjct: 275 IHLNIYPDVCTFNSVIDGLCKEGKVE--DAEEIMTYMIEKGVEPNEITYNVVMDGYCLRG 332

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            +   AR +F+ M+ +GI+ DI +Y  L++   +  +MD A ++  E+    + P++VT 
Sbjct: 333 QMGR-ARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTC 391

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           S ++ G  + GR + A   F EM+  G   +  ++ T+L  Y K G  EEA+    ++E 
Sbjct: 392 SVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLER 451

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
                +   Y A++ G  K GK D+    FE++    + P+++TY+ +I  Y + GL  E
Sbjct: 452 RREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDE 511

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A  + R+ +  G   D   Y+ ++    ++  V    + L E+  +       T   ++D
Sbjct: 512 AKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMD 571

Query: 553 AFGRSATTECTVDDVERD 570
                 +    + +  RD
Sbjct: 572 IIAEDPSLLNMIPEFHRD 589



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 120/498 (24%), Positives = 229/498 (45%), Gaps = 44/498 (8%)

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAV-IDACGKGGV--DFKHV------VEIFDDMLRN 293
           YC    + F S   Y++ P   + N   I   G  GV  +F++V        +F  M+  
Sbjct: 8   YCLNG-NPFFSFFAYSIAPRHYSTNTCSISVKGNFGVSNEFENVKCLDDAFSLFRQMVTT 66

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
              P  ++F+ LL        + +  ++F E+    I  D F  +T++++ C   + DL 
Sbjct: 67  KPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLG 126

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG-LDRVSYNTVLS 412
           F ++A    K I  N VT++T+I G     ++ DA+++F ++    I   D V Y TV+ 
Sbjct: 127 FSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMD 186

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              K G  ++A  + + ME    + D   YN ++  + K G  D    +  +MK   + P
Sbjct: 187 GLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPP 246

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           +++TY++LID   K   +++   +F E     +  DV  ++++ID LCK G VE A  ++
Sbjct: 247 DIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIM 306

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQ 592
             M ++G+ PN +TYN ++D +            +   +G+ +     D+M    DK ++
Sbjct: 307 TYMIEKGVEPNEITYNVVMDGYC-----------LRGQMGRARRI--FDSMI---DKGIE 350

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
               +   +I  +     EK    KK ++  Q       +F+++ +  +KP++VT S +L
Sbjct: 351 PDIISYTALINGY----VEK----KKMDKAMQ-------LFREISQNGLKPSIVTCSVLL 395

Query: 653 NACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSS 710
                    E A +  +E++   +      H  L+G  +++ +  +A+S F +++     
Sbjct: 396 RGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRED 455

Query: 711 TASAFYNALTDMLWHFGQ 728
           T    Y A+ + L   G+
Sbjct: 456 TNIQIYTAVINGLCKNGK 473



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/448 (22%), Positives = 198/448 (44%), Gaps = 39/448 (8%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG---KGGVDFKHVVEI 286
           +FS L+ A     +    +S+F  + +  +  +    + V+++C    +  + F  +   
Sbjct: 74  SFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIH 133

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI-DQDIFTYNTLLDAIC 345
           F    + G+  + +TF +L+         + A +LF ++V   I + D   Y T++D +C
Sbjct: 134 F----KKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLC 189

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K      AF+++  M      P+   Y+ +ID + K G LD A ++ +EMK   I  D +
Sbjct: 190 KKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDII 249

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y +++    KL ++E+   +  EM    I  D  T+N+++ G  K+GK ++   +   M
Sbjct: 250 TYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYM 309

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
               V PN +TY+ ++D Y   G    A +IF      G++ D++ Y+ALI+   +   +
Sbjct: 310 IEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKM 369

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           + A+ L  E+++ G++P++VT + ++        TEC                  D M  
Sbjct: 370 DKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECA-------------KIFFDEM-- 414

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
                 Q AG   N  +     L+      G  E          +  F K+ + +   N+
Sbjct: 415 ------QAAGHIPN--LYTHCTLLGGYFKNGLVEEA--------MSHFHKLERRREDTNI 458

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRL 673
             ++A++N   +    + A    E+L L
Sbjct: 459 QIYTAVINGLCKNGKLDKAHATFEKLPL 486



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 114/243 (46%), Gaps = 20/243 (8%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMI--SILGR----LGKVDLA 212
           YT L+     + +  KA+Q F        R+  Q  L  +++  S+L R    +G+ + A
Sbjct: 356 YTALINGYVEKKKMDKAMQLF--------REISQNGLKPSIVTCSVLLRGLFEVGRTECA 407

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
           K  F+     G+   +Y    L+  Y ++G  +EA+S F+ ++R     N+  Y AVI+ 
Sbjct: 408 KIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVING 467

Query: 273 -CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            C  G +D  H    F+ +   G+ PD IT+ ++++   + GL + A+++  +M   G  
Sbjct: 468 LCKNGKLDKAHAT--FEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCL 525

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  TYN ++    + +++      + E+  K+ S    T   ++D  A+   L   LNM
Sbjct: 526 PDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAEDPSL---LNM 582

Query: 392 FSE 394
             E
Sbjct: 583 IPE 585


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 185/351 (52%), Gaps = 3/351 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V+ A  I  T   +      + + +LIS   + G  +EA  +F  M +  L+P+ V Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +ID  C KG +D     +  D+ML+ G+ P   T+NSL+         + A  +  E+
Sbjct: 330 NTLIDGFCNKGNLDMASAYK--DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             +GI  D  TYN L++  C+ A    AF +  EM A  I P   TY++++   +K  R+
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            +A ++F ++   G+  D + +N ++  +      + A  + K+M+   +  D VT+N +
Sbjct: 448 KEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTI 507

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G+ ++GK +E R +F++MK   + P+ ++++TLI  YS+ G  K+A ++  E    G 
Sbjct: 508 MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGF 567

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
              V+ Y+AL+  LCKN   + A  LL EM  +G+ P+  TY ++I+   +
Sbjct: 568 NPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 222/447 (49%), Gaps = 8/447 (1%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFETAL 220
           LLR+    G  +   + F F     +R   +  +    +I     + + D A   F T  
Sbjct: 119 LLRQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMK 178

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDF 280
            +G   T+   ++L+S + +    + A  ++  M R  +K ++ T+N +I+   K G   
Sbjct: 179 EKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEG-KL 237

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           K   +    M  +GV+P+ +T+N+++      G  EAA  +   M  + I+ D FTY +L
Sbjct: 238 KKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSL 297

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +  +CK  +++ A +I  EM  K + P+ V Y+T+IDG+   G LD A     EM   GI
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
                +YN+++       R +EA  + KE++  GI  DA+TYN L+ GY +     +   
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFL 417

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + ++M A  + P   TY++L+ V SK    KEA  +F++    G+  D ++++ALID  C
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHC 477

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT---VDDVERDLGKQKES 577
            N  V+ A  LL +M +  + P+ VT+N+I+    R    E      D+++R  G + + 
Sbjct: 478 SNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRR-GIKPDH 536

Query: 578 ANLDAMCSQDDK--DVQEAGRTDNQII 602
            + + + S   +  D+++A R  N+++
Sbjct: 537 ISFNTLISGYSRRGDIKDAFRVRNEML 563



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 220/487 (45%), Gaps = 43/487 (8%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I I+ RL     A ++   AL  G  N++      ++A               S  R   
Sbjct: 104 IVIVARLPSPKPALHLLRQALGGGTTNSIREIFEFLAA---------------SRDRLGF 148

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           K ++V    +   C     D     E F  M   GV P   T NSLL++  +    EAA 
Sbjct: 149 KSSIVFDYLIKSCCDMNRAD--EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAW 206

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            L+ EM    I   ++T+N +++ +CK  ++  A + +  M    + PN+VTY+T++ GY
Sbjct: 207 VLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGY 266

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
             +GR++ A  + + MK   I  D  +Y +++S   K GR EEA  + +EM   G+R  A
Sbjct: 267 CSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSA 326

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           V YN L+ G+  +G  D      ++M    +SP + TY++LI          EA  + +E
Sbjct: 327 VIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKE 386

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
            ++ G+  D + Y+ LI+  C+    + A  L DEM   GI+P   TY S++    +   
Sbjct: 387 IQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNR 446

Query: 560 TECTVDDVERDLGKQKE-------SANLDAMCSQDD--------KDVQEAGRTDNQIIKV 604
            +   DD+ + +  +         +A +D  CS  +        KD+       +++   
Sbjct: 447 MK-EADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEV--T 503

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           F  ++     +GK E   R+       +F +M +  IKP+ ++F+ +++  SR    +DA
Sbjct: 504 FNTIMQGHCREGKVE-EARE-------LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDA 555

Query: 665 SMLLEEL 671
             +  E+
Sbjct: 556 FRVRNEM 562



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 112/198 (56%), Gaps = 3/198 (1%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           K  ++++ +L +  ++  A ++F+   +EG       F+ALI  +  +   + A  +   
Sbjct: 432 KTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKD 491

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M R  + P+ VT+N ++   C +G V+     E+FD+M R G++PD I+FN+L++  SR 
Sbjct: 492 MDRMKVPPDEVTFNTIMQGHCREGKVE--EARELFDEMKRRGIKPDHISFNTLISGYSRR 549

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  + A  + NEM+  G +  + TYN L+  +CK  + DLA E++ EM +K ++P+  TY
Sbjct: 550 GDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTY 609

Query: 373 STMIDGYAKAGRLDDALN 390
            T+I+G AK    D+  N
Sbjct: 610 FTLIEGIAKVNIPDENKN 627



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 151/340 (44%), Gaps = 44/340 (12%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           D +T+  L+  +  +G   +A + F   V++  R +    + + +I      G +D+A  
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPS--AVIYNTLIDGFCNKGNLDMASA 347

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
             +  L +G   T+  +++LI A        EA  +   ++   + P+ +TYN +I+   
Sbjct: 348 YKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYC 407

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           +   + K    + D+ML +G++P + T+ SLL V S+    + A +LF ++   G+  D 
Sbjct: 408 RCA-NAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDA 466

Query: 335 FTYNTLLDAICKGAQMDLAFEIMA-----------------------------------E 359
             +N L+D  C  + +  AFE++                                    E
Sbjct: 467 IMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDE 526

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK--L 417
           M  + I P+ ++++T+I GY++ G + DA  + +EM   G     ++YN ++    K   
Sbjct: 527 MKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           G   E LL  KEM S G+  D  TY  L+ G  K    DE
Sbjct: 587 GDLAEELL--KEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 187/356 (52%), Gaps = 1/356 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++I  LG+ G+VD A  +FE  L+ G+      +++LI  +   G  ++   +F  + R 
Sbjct: 197 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 256

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             KP+L   N  +D   K G + +    IF+D+   G  PD  +++ L+   ++ G    
Sbjct: 257 GCKPDLTLLNTYMDCVFKAG-EVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARE 315

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
             N+F+ M  +G   D   YN ++D  CK  ++  A+EI+ EM  K + P V TY  ++D
Sbjct: 316 TSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVD 375

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G AK  RLD+A  +F E K  GI L+ V Y++++  + K+GR +EA L+ +EM   G+  
Sbjct: 376 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 435

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +  T+N+LL    K  + +E    F+ MK     PN  TYS LI+   +   Y +A   +
Sbjct: 436 NVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFW 495

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           ++ ++ GL  +VV Y+ +I  L K G +  A SL +     G  P+  ++N++I+ 
Sbjct: 496 QDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 551



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 143/549 (26%), Positives = 241/549 (43%), Gaps = 70/549 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT ++  L   G   +A +   FA    ER        + MI   G  G+ + A  + E 
Sbjct: 21  YTSMIWVLCKAGRLGEAEE--LFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLER 78

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G   +V +F+++++  G+     EA+S+F  MK+ + +PN  TYN +ID    GG 
Sbjct: 79  LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGG- 136

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +    I D+M    + P+ +T N ++    +    E A  +F     RG + D  TY 
Sbjct: 137 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 196

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L+D + K  Q+D A+ +  +M     + N V Y+++I  +   GR +D   +F E+   
Sbjct: 197 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 256

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKE----------------------------- 429
           G   D    NT +    K G  E+  ++ ++                             
Sbjct: 257 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 316

Query: 430 ------MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
                 M+  G   DA  YNA++ G+ K GK  +   + E+MK  CV P + TY  ++D 
Sbjct: 317 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 376

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            +K     EA  +F E K  G++ +VVLYS+LID   K G ++ A  +L+EM K+G+ PN
Sbjct: 377 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 436

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           V T+NS++DA  ++                  E  N   +C Q  K+++    T    I 
Sbjct: 437 VYTWNSLLDALVKA------------------EEINEALVCFQSMKEMKCPPNTYTYSIL 478

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           + G    +K  +                 +Q M K  + PNVVT++ +++  ++  +  D
Sbjct: 479 INGLCRVQKYNKA-------------FVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD 525

Query: 664 ASMLLEELR 672
           A  L E  +
Sbjct: 526 AYSLFERFK 534



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 130/562 (23%), Positives = 234/562 (41%), Gaps = 100/562 (17%)

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDACGKGGV---------------------------- 278
           A   F+ +K   LKP+ V+Y ++I    K G                             
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 279 ------DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR--------------------- 311
                  F+   ++ + +   G  P  ++FNS+L    +                     
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPN 121

Query: 312 -------------GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
                        GG  E A  + +EM H  +  ++ T N ++D +CK  +++ A++I  
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 181

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
               +  +P+ VTY ++IDG  K G++D+A  +F +M   G   + V Y +++  +   G
Sbjct: 182 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 241

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           R E+   + KE+   G + D    N  +    K G+ ++ R +FE +++    P++ +YS
Sbjct: 242 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 301

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            LI   +K G  +E   IF   KQ G   D   Y+A++D  CK+G V  A  +L+EM ++
Sbjct: 302 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 361

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERD--LGKQKESANLD---AMCSQDDKDVQE 593
            ++P V TY +I+D   +       +D ++    L ++ +S  ++    + S       +
Sbjct: 362 CVQPTVATYGAIVDGLAK-------IDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGK 414

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCR-----------QEILCILGVFQKMHKLKIK 642
            GR D   +     ++ E   +G   N              +EI   L  FQ M ++K  
Sbjct: 415 VGRIDEAYL-----ILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCP 469

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGYRDNIWVQALS 699
           PN  T+S ++N   R   +  A +  ++++   L  N V        +    NI   A S
Sbjct: 470 PNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNI-TDAYS 528

Query: 700 LFDEVKLMDSSTASAFYNALTD 721
           LF+  K       +A +NAL +
Sbjct: 529 LFERFKANGGIPDAASFNALIE 550



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 173/337 (51%), Gaps = 3/337 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+R     G      + F   ++R   K D   L + M  +  + G+V+  + IFE 
Sbjct: 230 YTSLIRNFFIHGRKEDGHKIFKELIRRG-CKPDLTLLNTYMDCVF-KAGEVEKGRMIFED 287

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + G+   V ++S LI    ++G  +E  ++F++MK+     +   YNAV+D   K G 
Sbjct: 288 IRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGK 347

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K   EI ++M    VQP   T+ +++   ++    + A  LF E   +GI+ ++  Y+
Sbjct: 348 VHK-AYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYS 406

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L+D   K  ++D A+ I+ EM  K ++PNV T+++++D   KA  +++AL  F  MK +
Sbjct: 407 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEM 466

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
               +  +Y+ +++   ++ ++ +A +  ++M+  G+  + VTY  ++ G  K G   + 
Sbjct: 467 KCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDA 526

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +FE+ KA+   P+  +++ LI+  S      EA Q
Sbjct: 527 YSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 190/402 (47%), Gaps = 40/402 (9%)

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
           +A++   E+ A+ + P+ V+Y++MI    KAGRL +A  +F++M+         +YNT++
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
             Y   GRFE+A  + + +   G     V++N++L   GK+ K DE   +FE MK D   
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-AE 119

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           PN  TY+ +ID+   GG  +EA +I  E + A L  +++  + ++D LCK   +E A  +
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
            +  ++ G  P+ VTY S+ID  G+       VD+  R   K                 +
Sbjct: 180 FESASQRGCNPDCVTYCSLIDGLGKKG----QVDEAYRLFEK-----------------M 218

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
            +AG   N +  V+  L+      G+KE+  +        +F+++ +   KP++   +  
Sbjct: 219 LDAGHNANPV--VYTSLIRNFFIHGRKEDGHK--------IFKELIRRGCKPDLTLLNTY 268

Query: 652 LNACSRCNSFEDASMLLEELRLF----DNQVYGV-AHGLLMGYRDNIWVQALSLFDEVKL 706
           ++   +    E   M+ E++R +    D + Y +  HGL    +     +  ++F  +K 
Sbjct: 269 MDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR---ETSNIFHAMKQ 325

Query: 707 MDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENV 748
              +  +  YNA+ D     G+   A  ++ E K + V   V
Sbjct: 326 QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 367


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 226/462 (48%), Gaps = 30/462 (6%)

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           + +I    R+G  + A+ V+  M   +  P+ +TY  ++    K G   +  V++  +M+
Sbjct: 119 NVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAG-RLRDAVQVLQEMV 176

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
                PD  T   ++     G   + AR L  EM+HRG+  +  TY+ L+D +CK  ++D
Sbjct: 177 SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 236

Query: 352 LAFEIM-AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
            A  ++  E+  +  +P++VTYST+IDG  KAGRL DA+++F EM         ++YN++
Sbjct: 237 EAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTA---ITYNSL 293

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +  Y + G  +EA+ +  +M       D +TY  L+  + K G+ D+   +F+QM A+ +
Sbjct: 294 IGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKL 353

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           SP+++T+++L+D     G  ++A+++  E  + G    +  Y+ ++D  CK+  V  A  
Sbjct: 354 SPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEE 413

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT---VDDVERDLGKQKESAN-----LDA 582
           L+ +    G  PN VTYN ++    R+  T+     +D +  + G    S       LDA
Sbjct: 414 LVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDA 473

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL--- 639
           +C          GRTD+  ++ + +++                 LC     Q+ H+L   
Sbjct: 474 LCRD--------GRTDDA-VQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEE 524

Query: 640 KIK----PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQ 677
            IK    P   T  A+++A  R    + A  L  ELRL+ ++
Sbjct: 525 MIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLYTDK 566



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 199/407 (48%), Gaps = 11/407 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L   G    A+Q     V    R        + ++  L    +VD A+ + E 
Sbjct: 152 YTKLVHGLSKAGRLRDAVQVLQEMVS--ARHVPDNTTLTVVVQSLCLGDRVDDARELVEE 209

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRYNLKPNLVTYNAVIDACGKGG 277
            L+ G       +SAL+    +     EA+++    + R    P++VTY+ VID   K G
Sbjct: 210 MLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAG 269

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              +  V+IF++M      P  IT+NSL+    R G  + A  L  +MV      D+ TY
Sbjct: 270 -RLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITY 325

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TL+ A CK  ++D A+E+  +M A  +SP+VVT+++++DG    GR++DAL +  E+  
Sbjct: 326 TTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR 385

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G      +YN V+  Y K  +  +A  +  +  S G   + VTYN L+ G  + G+ D+
Sbjct: 386 RGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ 445

Query: 458 VRRMFEQMKAD---CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
             +  +Q+ ++   C + ++  Y+ ++D   + G   +A+Q + E  Q G       ++ 
Sbjct: 446 ALQYLDQLNSEGGPCPT-SVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFAT 504

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           ++ ALCK    + A  LL+EM K G  P   T ++++ A+ R+   +
Sbjct: 505 VVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQ 551



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 188/394 (47%), Gaps = 38/394 (9%)

Query: 280 FKHVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            +H+  +  D +R+ G+ PD +  N++LA          A  LF++M   G       YN
Sbjct: 26  LRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYN 85

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+  +CK   +D A  ++ +M ++ ++P  + ++ +I G  +AGRL  AL ++ +M   
Sbjct: 86  -LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND- 143

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
               D ++Y  ++   +K GR  +A+ V +EM S+    D  T   ++       + D+ 
Sbjct: 144 AHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDA 203

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR-EFKQAGLKADVVLYSALID 517
           R + E+M    ++ N +TYS L+D   K     EA+ +   E  + G   D+V YS +ID
Sbjct: 204 RELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVID 263

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            LCK G +  AV + +EM+     P  +TYNS+I  + R+      +D+  R LGK    
Sbjct: 264 GLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAG----DMDEAIRLLGKM--- 313

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
             +D  C+ D              +  +  L++     G+ ++           +FQ+M 
Sbjct: 314 --VDDNCAPD--------------VITYTTLMSAFCKMGRLDD--------AYELFQQMV 349

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             K+ P+VVTF+++++        EDA  LLEE+
Sbjct: 350 ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 204/404 (50%), Gaps = 26/404 (6%)

Query: 173 SKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFS 232
            +A +CF     R+ R   + +  +A++  L ++G+ DL++  F+     G   +V+ ++
Sbjct: 3   EEASECFL--KMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60

Query: 233 ALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLR 292
            +I    + G  + A S+F  MK     P++VTYN++ID  GK G+     + IF+ M  
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGL-LDECICIFEQMKD 119

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
               PD IT+N+L+    +      A    +EM   G+  ++ TY+T +DA CK   +  
Sbjct: 120 ADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQE 179

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A +   +M    ++PN  TY+++ID   KAG L +AL +  E+   GI L+ V+Y  +L 
Sbjct: 180 AIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 239

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              + GR +EA  V + M ++G+  +  TY AL+ G+ K  + +  + + ++MK  C+ P
Sbjct: 240 GLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKP 299

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA-------------- 518
           +LL Y T++         +EA  +  E K++G+  + V+Y+ L+DA              
Sbjct: 300 DLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLL 359

Query: 519 ---------LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
                    LCKN   E A  L DEM  +G+ P+ + Y ++ID 
Sbjct: 360 EEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDG 403



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 173/327 (52%), Gaps = 1/327 (0%)

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           +AL+    + G    +   F  M    +K ++ TYN +ID   K G D +    +F  M 
Sbjct: 25  NALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEG-DLEMARSLFTQMK 83

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
             G  PD +T+NSL+    + GL +    +F +M     D D+ TYN L++  CK  +M 
Sbjct: 84  EAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMP 143

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            AFE + EM A  + PNVVTYST ID + K G L +A+  F +M+ + +  +  +Y +++
Sbjct: 144 KAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLI 203

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
               K G   EAL + +E+  +GI+ + VTY ALL G  ++G+  E   +F  M    V+
Sbjct: 204 DANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVA 263

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           PN  TY+ L+  + K    + A  I +E K+  +K D++LY  ++  LC    +E A  L
Sbjct: 264 PNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLL 323

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           + E+ + GI  N V Y +++DA+ +S 
Sbjct: 324 IGEIKESGINTNAVIYTTLMDAYFKSG 350



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 158/281 (56%)

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           E F  M +  V P   + N+LL   S+ G  + +R  F +M   GI + +FTYN ++D +
Sbjct: 7   ECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYL 66

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK   +++A  +  +M     +P++VTY+++IDG+ K G LD+ + +F +MK      D 
Sbjct: 67  CKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDV 126

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           ++YN +++ + K  R  +A     EM+++G++ + VTY+  +  + K+G   E  + F  
Sbjct: 127 ITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVD 186

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M+   ++PN  TY++LID   K G   EA+++  E  QAG+K +VV Y+AL+D LC+ G 
Sbjct: 187 MRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGR 246

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           ++ A  +   M   G+ PN  TY +++  F ++   E   D
Sbjct: 247 MKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKD 287



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 190/375 (50%), Gaps = 26/375 (6%)

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
           G+LG +D    IFE   +      V  ++ALI+ + +     +A    + MK   LKPN+
Sbjct: 102 GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNV 161

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
           VTY+  IDA  K G+  +  ++ F DM R  + P+  T+ SL+ A C  G L EA + L 
Sbjct: 162 VTYSTFIDAFCKEGM-LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALK-LV 219

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            E++  GI  ++ TY  LLD +C+  +M  A E+   M    ++PN  TY+ ++ G+ KA
Sbjct: 220 EEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKA 279

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
             ++ A ++  EMK   I  D + Y T+L       R EEA L+  E++ SGI  +AV Y
Sbjct: 280 KEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIY 339

Query: 443 NALLGGYGKQGKYDEVRRMFEQM--------KADC---------------VSPNLLTYST 479
             L+  Y K G+  E   + E+M        K +C               + P+ + Y+ 
Sbjct: 340 TTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTA 399

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LID   K G  +EA+ +     + G++ D+  Y+ALI  L  +G V+ A +LLDEM  +G
Sbjct: 400 LIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKG 459

Query: 540 IRPNVVTYNSIIDAF 554
           + P+ V Y  +I  +
Sbjct: 460 VLPDEVVYMCLIKKY 474



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 177/369 (47%), Gaps = 28/369 (7%)

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A E   +M    + P   + + ++   +K GR D +   F +M   GI     +YN ++ 
Sbjct: 5   ASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMID 64

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK-ADCVS 471
              K G  E A  +  +M+ +G   D VTYN+L+ G+GK G  DE   +FEQMK ADC  
Sbjct: 65  YLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADC-D 123

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P+++TY+ LI+ + K     +A +   E K  GLK +VV YS  IDA CK G+++ A+  
Sbjct: 124 PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKF 183

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER------DLGKQKESANLDAMCS 585
             +M +  + PN  TY S+IDA  ++      +  VE        L     +A LD +C 
Sbjct: 184 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 243

Query: 586 QDD-KDVQE-------AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
           +   K+ +E       AG   NQ  + +  LV        KE    ++IL      ++M 
Sbjct: 244 EGRMKEAEEVFRAMLNAGVAPNQ--ETYTALV--HGFIKAKEMEYAKDIL------KEMK 293

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWV 695
           +  IKP+++ +  IL      +  E+A +L+ E++        V +  LM   ++     
Sbjct: 294 EKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQAT 353

Query: 696 QALSLFDEV 704
           +AL+L +E+
Sbjct: 354 EALTLLEEM 362



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 169/379 (44%), Gaps = 48/379 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+   +  ++  A          G    V  +S  I A+ + G  QEAI  F  M+R
Sbjct: 130 NALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRR 189

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             L PN  TY ++IDA  K G +    +++ +++L+ G++ + +T+ +LL  +C  G + 
Sbjct: 190 VALTPNEFTYTSLIDANCKAG-NLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMK 248

Query: 316 EA----------------------------------ARNLFNEMVHRGIDQDIFTYNTLL 341
           EA                                  A+++  EM  + I  D+  Y T+L
Sbjct: 249 EAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTIL 308

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             +C  ++++ A  ++ E+    I+ N V Y+T++D Y K+G+  +AL +  EM  L  G
Sbjct: 309 WGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDG 368

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
           L             K   FE A  +  EM   G+  D + Y AL+ G  K G   E   +
Sbjct: 369 L------------CKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNL 416

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            ++M    +  +L  Y+ LI   S  G  ++A  +  E    G+  D V+Y  LI     
Sbjct: 417 RDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYA 476

Query: 522 NGLVESAVSLLDEMTKEGI 540
            G V+ A+ L +EM K G+
Sbjct: 477 LGKVDEALELQNEMAKRGM 495


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 187/355 (52%), Gaps = 1/355 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++I  LG+ G+VD A  +FE  L+ G+      +++LI  +   G  ++   VF  + R 
Sbjct: 329 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRR 388

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             KP+L   N  +D   K G + +    IF+D+   G  PD  +++ L+   ++ G    
Sbjct: 389 GCKPDLTLLNTYMDCVFKAG-EVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARE 447

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
             N+F+ M  +G   D   YN ++D  CK  ++  A+EI+ EM  K + P V TY  ++D
Sbjct: 448 TSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVD 507

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G AK  RLD+A  +F E K  GI L+ V Y++++  + K+GR +EA L+ +EM   G+  
Sbjct: 508 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 567

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +  T+N+LL    K  + +E    F+ MK     PN  TYS LI+   +   Y +A   +
Sbjct: 568 NVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFW 627

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           ++ ++ GL  +VV Y+ +I  L K G +  A SL +     G  P+  ++N++I+
Sbjct: 628 QDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIE 682



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 143/549 (26%), Positives = 241/549 (43%), Gaps = 70/549 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT ++  L   G   +A +   FA    ER        + MI   G  G+ + A  + E 
Sbjct: 153 YTSMIWVLCKAGRLGEAEE--LFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLER 210

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G   +V +F+++++  G+     EA+S+F  MK+ + +PN  TYN +ID    GG 
Sbjct: 211 LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGG- 268

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +    I D+M    + P+ +T N ++    +    E A  +F     RG + D  TY 
Sbjct: 269 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 328

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L+D + K  Q+D A+ +  +M     + N V Y+++I  +   GR +D   +F E+   
Sbjct: 329 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRR 388

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKE----------------------------- 429
           G   D    NT +    K G  E+  ++ ++                             
Sbjct: 389 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 448

Query: 430 ------MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
                 M+  G   DA  YNA++ G+ K GK  +   + E+MK  CV P + TY  ++D 
Sbjct: 449 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 508

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            +K     EA  +F E K  G++ +VVLYS+LID   K G ++ A  +L+EM K+G+ PN
Sbjct: 509 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 568

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           V T+NS++DA  ++                  E  N   +C Q  K+++    T    I 
Sbjct: 569 VYTWNSLLDALVKA------------------EEINEALVCFQSMKEMKCPPNTYTYSIL 610

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           + G    +K  +                 +Q M K  + PNVVT++ +++  ++  +  D
Sbjct: 611 INGLCRVQKYNKA-------------FVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD 657

Query: 664 ASMLLEELR 672
           A  L E  +
Sbjct: 658 AYSLFERFK 666



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/531 (25%), Positives = 242/531 (45%), Gaps = 41/531 (7%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           GYG    A + L +A  R+    +A+     M+R   +P    Y  +I A  +     + 
Sbjct: 5   GYGLPNQACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRP-ER 63

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            +E+   M   G +     F +L+   +R G    A  L +E+    ++ DI  YN  +D
Sbjct: 64  ALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCID 123

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
              K   +D+A +   E+ A+ + P+ V+Y++MI    KAGRL +A  +F++M+      
Sbjct: 124 CFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVP 183

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
              +YNT++  Y   GRFE+A  + + +   G     V++N++L   GK+ K DE   +F
Sbjct: 184 CAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF 243

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           E MK D   PN  TY+ +ID+   GG  +EA +I  E + A L  +++  + ++D LCK 
Sbjct: 244 EVMKKD-AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKA 302

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
             +E A  + +  ++ G  P+ VTY S+ID  G+       VD+  R   K         
Sbjct: 303 RKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKG----QVDEAYRLFEK--------- 349

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
                   + +AG   N +  V+  L+      G+KE+  +        VF+++ +   K
Sbjct: 350 --------MLDAGHNANPV--VYTSLIRNFFIHGRKEDGHK--------VFKELIRRGCK 391

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYGV-AHGLLMGYRDNIWVQA 697
           P++   +  ++   +    E   M+ E++R +    D + Y +  HGL    +     + 
Sbjct: 392 PDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR---ET 448

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENV 748
            ++F  +K    +  +  YNA+ D     G+   A  ++ E K + V   V
Sbjct: 449 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 499



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/529 (23%), Positives = 238/529 (44%), Gaps = 68/529 (12%)

Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
            A AV R  +        + +I  L    + + A  +       GY   V+ F+ L+ A 
Sbjct: 31  LAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRAL 90

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
            R G   +A+++ + +K   L+P++V YN  ID  GK G +     + F ++   G++PD
Sbjct: 91  AREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAG-NVDMACKFFHELKAQGLKPD 149

Query: 299 RITFNSLLAV-CSRGGLWEA----------------------------------ARNLFN 323
            +++ S++ V C  G L EA                                  A  L  
Sbjct: 150 DVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLE 209

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
            +  RG    + ++N++L  + K  ++D A  +  E+  K+  PN  TY+ +ID     G
Sbjct: 210 RLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGG 268

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           R+++A  +  EM+   +  + ++ N ++    K  + EEA  + +     G   D VTY 
Sbjct: 269 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 328

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           +L+ G GK+G+ DE  R+FE+M     + N + Y++LI  +   G  ++  ++F+E  + 
Sbjct: 329 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRR 388

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           G K D+ L +  +D + K G VE    + +++   G  P+V +Y+ +I    ++      
Sbjct: 389 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKA------ 442

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
                   G+ +E++N+     Q    +    R  N ++  F      K+G+  K     
Sbjct: 443 --------GQARETSNIFHAMKQQGFALD--ARAYNAVVDGFC-----KSGKVHKA---- 483

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            EIL      ++M +  ++P V T+ AI++  ++ +  ++A ML EE +
Sbjct: 484 YEIL------EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 526



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 173/337 (51%), Gaps = 3/337 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+R     G      + F   ++R   K D   L + M  +  + G+V+  + IFE 
Sbjct: 362 YTSLIRNFFIHGRKEDGHKVFKELIRRG-CKPDLTLLNTYMDCVF-KAGEVEKGRMIFED 419

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + G+   V ++S LI    ++G  +E  ++F++MK+     +   YNAV+D   K G 
Sbjct: 420 IRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGK 479

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K   EI ++M    VQP   T+ +++   ++    + A  LF E   +GI+ ++  Y+
Sbjct: 480 VHK-AYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYS 538

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L+D   K  ++D A+ I+ EM  K ++PNV T+++++D   KA  +++AL  F  MK +
Sbjct: 539 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEM 598

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
               +  +Y+ +++   ++ ++ +A +  ++M+  G+  + VTY  ++ G  K G   + 
Sbjct: 599 KCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDA 658

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +FE+ KA+   P+  +++ LI+  S      EA Q
Sbjct: 659 YSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 73/157 (46%)

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M  LG GL   +   + +   +  R ++A+L    M     R     Y  L+G   +  +
Sbjct: 1   MAVLGYGLPNQACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARR 60

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            +    +  QM+       +  ++TL+   ++ G   +A+ +  E K + L+ D+VLY+ 
Sbjct: 61  PERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNV 120

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            ID   K G V+ A     E+  +G++P+ V+Y S+I
Sbjct: 121 CIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMI 157


>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
          Length = 583

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 187/358 (52%), Gaps = 3/358 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI +  R  +VD A+ +F              +++LI A+ R+G  + AI++   M R  
Sbjct: 17  MIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAA 76

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           + P   TYN VI+ACG  G ++K  +E+   M  NGV PD +T N +L+    G  +  A
Sbjct: 77  IPPTRTTYNNVINACGAAG-NWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKA 135

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS--PNVVTYSTMI 376
            + F  M    +  D FT N ++  + K  Q   A E+   M  +     P+VVTY++++
Sbjct: 136 ISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIM 195

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             Y   G++++   +F  M   G+  + V+YN++L  YA  G   EAL +   ++ +G+R
Sbjct: 196 HSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLR 255

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D V+Y +LL  YG+  + ++ R +F +MK +   PN ++Y+ LID Y   G+ KEA+ +
Sbjct: 256 PDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGL 315

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             E ++ G++ DVV  S L+ A  +   +    ++L+     GI  N V YNS I ++
Sbjct: 316 LHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSY 373



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 179/328 (54%), Gaps = 3/328 (0%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +  +I  Y R     +A  +F  M+ +  KP+   YN++I A  + G  ++  + I +DM
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAG-QWRWAINIMEDM 72

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           LR  + P R T+N+++  C   G W+ A  L  +M   G+  D+ T+N +L A+  GAQ 
Sbjct: 73  LRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQY 132

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL--DRVSYN 408
             A      M   N++ +  T + +I    K G+  +A+ +F+ M+        D V+Y 
Sbjct: 133 SKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYT 192

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           +++  Y   G+ E    +   M + G++ + V YN+LLG Y  +G + E   +F  +K +
Sbjct: 193 SIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKN 252

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + P++++Y++L++ Y +    ++A ++F + K+   K + V Y+ALIDA    G+++ A
Sbjct: 253 GLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEA 312

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           V LL EM K+GI+P+VV+ ++++ A GR
Sbjct: 313 VGLLHEMEKDGIQPDVVSISTLLAACGR 340



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 175/348 (50%), Gaps = 13/348 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK---LASAMISILGRLGKVDLAKNI 215
           Y  ++   G  G W KA++     + ++  +N  G      + ++S L    +   A + 
Sbjct: 84  YNNVINACGAAGNWKKALE-----LCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISY 138

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK--RYNLKPNLVTYNAVIDA- 272
           FE        +  +  + +I    + G C EAI +FNSM+  R    P++VTY +++ + 
Sbjct: 139 FEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSY 198

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C  G V+  +   IFD M+  GV+P+ + +NSLL   +  G+   A  +FN +   G+  
Sbjct: 199 CIYGQVE--NCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRP 256

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           DI +Y +LL+A  + AQ + A E+  +M   +  PN V+Y+ +ID Y  AG L +A+ + 
Sbjct: 257 DIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLL 316

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            EM+  GI  D VS +T+L+   +  +      + +   S GI  + V YN+ +  Y   
Sbjct: 317 HEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSF 376

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           G Y++   ++  M+   V P+ +TY+ LI   SK G Y E+++ F + 
Sbjct: 377 GDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDM 424



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 172/374 (45%), Gaps = 35/374 (9%)

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           +  ++ + +R    + AR LF EM       D   YN+L+ A  +  Q   A  IM +M 
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
              I P   TY+ +I+    AG    AL +  +M   G+G D V++N VLS      ++ 
Sbjct: 74  RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK---ADCVSPNLLTYS 478
           +A+   + M+ + +  D  T N ++    K G+  E   +F  M+     C  P+++TY+
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKC-PPDVVTYT 192

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           +++  Y   G  +    IF      G+K ++V Y++L+ A    G+   A+++ + + K 
Sbjct: 193 SIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKN 252

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
           G+RP++V+Y S+++A+GRSA  E           K +E  N            +    + 
Sbjct: 253 GLRPDIVSYTSLLNAYGRSAQPE-----------KAREVFN-----KMKKNSCKPNKVSY 296

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
           N +I  +G      AG  K+           +G+  +M K  I+P+VV+ S +L AC RC
Sbjct: 297 NALIDAYGS-----AGMLKEA----------VGLLHEMEKDGIQPDVVSISTLLAACGRC 341

Query: 659 NSFEDASMLLEELR 672
                   +LE  R
Sbjct: 342 RQITRIETILEAAR 355



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 176/393 (44%), Gaps = 17/393 (4%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCF------AFAVKREERKNDQGKLASAMISILGRLGKV 209
           AD Y  L+      G+W  AI         A    R    N        +I+  G  G  
Sbjct: 46  ADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNN--------VINACGAAGNW 97

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
             A  + +     G G  +   + ++SA        +AIS F  MK  N+  +  T N +
Sbjct: 98  KKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNII 157

Query: 270 IDACGKGGVDFKHVVEIFDDML--RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           I    K G      +E+F+ M   R    PD +T+ S++      G  E  + +F+ MV 
Sbjct: 158 IHCLVKIG-QCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVA 216

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G+  +I  YN+LL A         A  I   +    + P++V+Y+++++ Y ++ + + 
Sbjct: 217 EGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEK 276

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +F++MK      ++VSYN ++  Y   G  +EA+ +  EME  GI+ D V+ + LL 
Sbjct: 277 AREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLA 336

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
             G+  +   +  + E  ++  +  N + Y++ I  Y   G Y++A++++   +++ +K 
Sbjct: 337 ACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKP 396

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           D V Y+ LI    K G    ++   ++M    +
Sbjct: 397 DAVTYNILISGSSKLGKYTESLRFFEDMVDSKV 429



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 137/313 (43%), Gaps = 47/313 (15%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           IF      G    + ++++L++AYGRS   ++A  VFN MK+ + KPN V+YNA+IDA G
Sbjct: 245 IFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYG 304

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
             G+  K  V +  +M ++G+QPD ++ ++LLA C R         +      RGID + 
Sbjct: 305 SAGM-LKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNT 363

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
             YN+ + +       + A E+   M   N+ P+ VTY+ +I G +K G+  ++L  F +
Sbjct: 364 VAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFED 423

Query: 395 M-------------------------------------------KFLGIGLDRVSYNT-- 409
           M                                           ++L   L  +S  T  
Sbjct: 424 MVDSKVSSTKEFLWTIRWLEESLGPVQRDGSKWIRDWKTASEMIEYLDSSLSSISVGTLN 483

Query: 410 -VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            VL+   K G+ E  + +  +M +S       TY  +L      GK+ +   + + M+  
Sbjct: 484 HVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEVLQWMEDS 543

Query: 469 CVSPNLLTYSTLI 481
            V P L  +  ++
Sbjct: 544 GVHPTLYMFQNVL 556


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/543 (26%), Positives = 245/543 (45%), Gaps = 93/543 (17%)

Query: 154 CGADDYTFLL---RELGNRGEWS--KAIQCFAFAVKREERKNDQGKLASAMISILGRLGK 208
           C  +D  F+L   R++   GE+     ++C+                 + ++  L +   
Sbjct: 132 CSIEDVLFVLEVFRKMNADGEFKFKPTLRCY-----------------NTILMSLSKFLL 174

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           +D  K ++   LN      +Y F+A+++ Y + G   EA    + + +  L P+  TY +
Sbjct: 175 IDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTS 234

Query: 269 VI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA--------- 317
           +I   C   GVD  +  E+F  M + G Q + +++ +L+  +C  G + EA         
Sbjct: 235 LILGHCRNKGVD--NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTE 292

Query: 318 -------------------------ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
                                    A NLFNEM  +G + ++ TY  L+D +CK  +MD 
Sbjct: 293 DNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDE 352

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A ++++EM  K + P+VVTY+ +IDGY K G +DDA  +   M+    G +  +YN ++ 
Sbjct: 353 ARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELIC 412

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              K  +  +A+ +  +M    +    +TYN+L+ G  K    +   R+   M  + + P
Sbjct: 413 GLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVP 472

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           +  TYS  ID   K G  +EA  +F   K  G+KA+ V+Y+ALID  CK G ++ A SLL
Sbjct: 473 DQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLL 532

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA-MCSQDDKDV 591
           + M  +   PN  TYN +I+   +                K KE+++L A M +   K  
Sbjct: 533 ERMLNDACLPNSYTYNVLIEGLCKEK--------------KMKEASSLVAKMLTMGVKPT 578

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
                     +  +  L+ E    G  ++         L VF  M  L  +P+V T++A 
Sbjct: 579 ----------VVTYTILIGEMLKDGAFDHA--------LKVFNHMVSLGYQPDVCTYTAF 620

Query: 652 LNA 654
           L+A
Sbjct: 621 LHA 623



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 141/574 (24%), Positives = 256/574 (44%), Gaps = 60/574 (10%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L   G  ++A++ FA     E+      +  + +I  L   G+   A N+F  
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMT--EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNE 324

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
              +G    V+ ++ LI    +     EA  + + M    L P++VTYNA+ID  C +G 
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D     EI D M  N   P+  T+N L+    +      A  L N+M+ R +   + TY
Sbjct: 385 ID--DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITY 442

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N+L+   CK   ++ A+ +++ M    + P+  TYS  ID   K GR+++A  +F  +K 
Sbjct: 443 NSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKA 502

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  + V Y  ++  Y K+G+ + A  + + M +     ++ TYN L+ G  K+ K  E
Sbjct: 503 KGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKE 562

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +  +M    V P ++TY+ LI    K G +  A+++F      G + DV  Y+A + 
Sbjct: 563 ASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLH 622

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT-------ECTVD----- 565
           A    G++E    ++ +M +EGI P++VTY  +ID + R   T       +C VD     
Sbjct: 623 AYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKP 682

Query: 566 ------------DVERDLGKQKESANLDAMCSQDDKDVQEAGRT-DNQI----------- 601
                         E  + + +    +D++ + +  D+ +  +T + +I           
Sbjct: 683 SLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEH 742

Query: 602 -----IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
                + ++G L+A    Q + E           G+   M +  + P+   ++++L+ C 
Sbjct: 743 GCTIDVSIYGALIAGFCQQERLEEA--------QGLVHHMKERGMSPSEDIYNSLLDCCC 794

Query: 657 RCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYR 690
           +   + +A      +RL D  V      LL  Y+
Sbjct: 795 KLGVYAEA------VRLVDAMVENGLLPLLESYK 822



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 216/467 (46%), Gaps = 57/467 (12%)

Query: 280 FKHVVEIFDDMLRNGVQP------DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           FKH V  +  ML   ++       ++I  + + + CS   +      LF   V R ++ D
Sbjct: 97  FKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDV------LFVLEVFRKMNAD 150

Query: 334 --------IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
                   +  YNT+L ++ K   +D    +  E+    ISPN+ T++ M++GY K G +
Sbjct: 151 GEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNV 210

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            +A    S++   G+  D  +Y +++  + +    + A  V   M   G +++ V+Y  L
Sbjct: 211 VEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNL 270

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  + G+ +E  ++F  M  D   P + TY+ LI   S  G   EA+ +F E K+ G 
Sbjct: 271 IHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGC 330

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           + +V  Y+ LID LCK   ++ A  +L EM+++G+ P+VVTYN++ID + +    E  +D
Sbjct: 331 EPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCK----EGMID 386

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
           D    L   + ++     C  +        RT N++I           G  KK     ++
Sbjct: 387 DAFEILDLMESNS-----CGPNT-------RTYNELI----------CGLCKK-----RK 419

Query: 626 ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL----EELRLFDNQVYGV 681
           +   + +  KM + K+ P+++T++++++   + N  E A  LL    E   + D   Y V
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479

Query: 682 AHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
               L   ++    +A +LFD VK          Y AL D     G+
Sbjct: 480 FIDTLC--KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 187/421 (44%), Gaps = 37/421 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S  I  L + G+V+ A  +F++   +G       ++ALI  Y + G    A S+   M  
Sbjct: 478 SVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN 537

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               PN  TYN +I+   K     K    +   ML  GV+P  +T+  L+    + G ++
Sbjct: 538 DACLPNSYTYNVLIEGLCKEK-KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +FN MV  G   D+ TY   L A      ++   +++A+M  + I P++VTY+ +I
Sbjct: 597 HALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656

Query: 377 DGYAKAGRLDDALNMFSEMKFLG---------------------------IGLDRVS-YN 408
           DGYA+ G    A +    M   G                           IG+D VS  N
Sbjct: 657 DGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVN 716

Query: 409 TV-LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           +V ++   K   +E AL + ++M   G   D   Y AL+ G+ +Q + +E + +   MK 
Sbjct: 717 SVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKE 776

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             +SP+   Y++L+D   K G+Y EA+++     + GL   +  Y  L+  L   G  E 
Sbjct: 777 RGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEK 836

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDA-FGRSATTECT--VDDVERDLGKQKESANLDAMC 584
           A ++   +   G   + V +  +ID    R    EC+  +D +E    ++  +A  D  C
Sbjct: 837 AKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIME----EKDATAQADIAC 892

Query: 585 S 585
           +
Sbjct: 893 A 893


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 185/351 (52%), Gaps = 3/351 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V+ A  I  T   +      + + +LIS   + G  +EA  +F  M +  L+P+ V Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +ID  C KG +D     +  D+ML+ G+ P   T+NSL+         + A  +  E+
Sbjct: 330 NTLIDGFCNKGNLDMASAYK--DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             +GI  D  TYN L++  C+ A    AF +  EM A  I P   TY++++   +K  R+
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            +A ++F ++   G+  D + +N ++  +      + A  + K+M+   +  D VT+N +
Sbjct: 448 KEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTI 507

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G+ ++GK +E R +F++MK   + P+ ++++TLI  YS+ G  K+A ++  E    G 
Sbjct: 508 MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGF 567

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
              V+ Y+AL+  LCKN   + A  LL EM  +G+ P+  TY ++I+   +
Sbjct: 568 NPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 208/402 (51%), Gaps = 7/402 (1%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           + + D A   F T   +G   T+   ++L+S + +    + A  ++  M R  +K ++ T
Sbjct: 164 MNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYT 223

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           +N +I+   K G   K   +    M  +GV+P+ +T+N+++      G  EAA  +   M
Sbjct: 224 FNIMINVLCKEG-KLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             + I+ D FTY +L+  +CK  +++ A +I  EM  K + P+ V Y+T+IDG+   G L
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D A     EM   GI     +YN+++       R +EA  + KE++  GI  DA+TYN L
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + GY +     +   + ++M A  + P   TY++L+ V SK    KEA  +F++    G+
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT-- 563
             DV++++ALID  C N  V+ A  LL +M +  + P+ VT+N+I+    R    E    
Sbjct: 463 LPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 564 -VDDVERDLGKQKESANLDAMCSQDDK--DVQEAGRTDNQII 602
             D+++R  G + +  + + + S   +  D+++A R  N+++
Sbjct: 523 LFDEMKRR-GIKPDHISFNTLISGYSRRGDIKDAFRVRNEML 563



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 221/487 (45%), Gaps = 43/487 (8%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I I+ RL     A ++ + AL  G  N++      ++A               S  R   
Sbjct: 104 IVIVARLPSPKPALHLLKQALGGGTTNSIREIFEFLAA---------------SRDRLGF 148

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           K ++V    +   C     D     E F  M   GV P   T NSLL++  +    EAA 
Sbjct: 149 KSSIVFDYLIKSCCDMNRAD--EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAW 206

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            L+ EM    I   ++T+N +++ +CK  ++  A + +  M    + PN+VTY+T++ GY
Sbjct: 207 VLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGY 266

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
             +GR++ A  + + MK   I  D  +Y +++S   K GR EEA  + +EM   G+R  A
Sbjct: 267 CSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSA 326

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           V YN L+ G+  +G  D      ++M    +SP + TY++LI          EA  + +E
Sbjct: 327 VIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKE 386

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
            ++ G+  D + Y+ LI+  C+    + A  L DEM   GI+P   TY S++    +   
Sbjct: 387 IQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNR 446

Query: 560 TECTVDDVERDLGKQKE-------SANLDAMCSQDD--------KDVQEAGRTDNQIIKV 604
            +   DD+ + +  +         +A +D  CS  +        KD+       +++   
Sbjct: 447 MK-EADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEV--T 503

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           F  ++     +GK E   R+       +F +M +  IKP+ ++F+ +++  SR    +DA
Sbjct: 504 FNTIMQGHCREGKVE-EARE-------LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDA 555

Query: 665 SMLLEEL 671
             +  E+
Sbjct: 556 FRVRNEM 562



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 113/198 (57%), Gaps = 3/198 (1%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           K  ++++ +L +  ++  A ++F+   +EG    V  F+ALI  +  +   + A  +   
Sbjct: 432 KTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKD 491

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M R  + P+ VT+N ++   C +G V+     E+FD+M R G++PD I+FN+L++  SR 
Sbjct: 492 MDRMKVPPDEVTFNTIMQGHCREGKVE--EARELFDEMKRRGIKPDHISFNTLISGYSRR 549

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  + A  + NEM+  G +  + TYN L+  +CK  + DLA E++ EM +K ++P+  TY
Sbjct: 550 GDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTY 609

Query: 373 STMIDGYAKAGRLDDALN 390
            T+I+G AK    D+  N
Sbjct: 610 FTLIEGIAKVNIPDENKN 627



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 152/340 (44%), Gaps = 44/340 (12%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           D +T+  L+  +  +G   +A + F   V++  R +    + + +I      G +D+A  
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPS--AVIYNTLIDGFCNKGNLDMASA 347

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
             +  L +G   T+  +++LI A        EA  +   ++   + P+ +TYN +I+   
Sbjct: 348 YKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYC 407

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           +   + K    + D+ML +G++P + T+ SLL V S+    + A +LF ++   G+  D+
Sbjct: 408 RCA-NAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDV 466

Query: 335 FTYNTLLDAICKGAQMDLAFEIMA-----------------------------------E 359
             +N L+D  C  + +  AFE++                                    E
Sbjct: 467 IMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDE 526

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK--L 417
           M  + I P+ ++++T+I GY++ G + DA  + +EM   G     ++YN ++    K   
Sbjct: 527 MKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           G   E LL  KEM S G+  D  TY  L+ G  K    DE
Sbjct: 587 GDLAEELL--KEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 195/382 (51%), Gaps = 12/382 (3%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + SA+I  L + G+   A N++     +G    ++ ++ +I  +  SG   EA  +   M
Sbjct: 251 IYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEM 310

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               + PN+VTY+A+I+A  K    F    E++D+ML  G+ P+ IT+NS++    +   
Sbjct: 311 LERKINPNVVTYSALINAYVKER-KFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +AA ++F  M  +G   D+FT+NTL+D  C   ++D   E++ EM    +  +  TY+T
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS- 433
           +I G+   G L+ AL++  +M   G+  D V+ NT+L      G+ ++AL + K M+ S 
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489

Query: 434 ----------GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
                     G+  D  TYN L+ G   +GK+ E   ++++M    + PN +TYS++I+ 
Sbjct: 490 MDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMING 549

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K     EA Q+F          DVV ++ L+   CK G V+  + L  EM + GI  +
Sbjct: 550 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVAD 609

Query: 544 VVTYNSIIDAFGRSATTECTVD 565
            +TY ++I  F +       +D
Sbjct: 610 AITYITLIHGFRKVGNINGALD 631



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 243/506 (48%), Gaps = 55/506 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++ ++ R+ + DL  ++++    +     VY+F+ LI  +        A+S F  + +  
Sbjct: 83  LMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLG 142

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
            +P++VT++ ++   C +  V     +++F  M R    P+ +TF +L+  +C  G + E
Sbjct: 143 FQPDVVTFSTLLHGLCVEDRV--SEALDLFHQMCR----PNVVTFTTLMNGLCREGRVVE 196

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-PAKNISPNVVTYSTM 375
           A   L + MV  G+  +  TY T++D +CK      A  ++ +M    +I PNVV YS +
Sbjct: 197 AVA-LLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAI 255

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K GR  DA N+++EM+  GI  D  +YN ++  +   GR+ EA  + +EM    I
Sbjct: 256 IDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKI 315

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + VTY+AL+  Y K+ K+ E   ++++M    + PN +TY+++ID + K      A  
Sbjct: 316 NPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEH 375

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F      G   DV  ++ LID  C    ++    LL EMT+ G+  +  TYN++I  F 
Sbjct: 376 MFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGF- 434

Query: 556 RSATTECTVDDVER--DLGKQKESAN-----------LDAMCS--------------QDD 588
                 C V D+    DL +Q  S+            LD +C               Q  
Sbjct: 435 ------CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 488

Query: 589 KDVQEAGRTDNQI---IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
           K   +A R  N +   ++ +  L++    +GK         L    ++++M    I PN 
Sbjct: 489 KMDLDASRPFNGVEPDVQTYNILISGLINEGK--------FLEAEELYKEMPHRGIVPNT 540

Query: 646 VTFSAILNACSRCNSFEDASMLLEEL 671
           +T+S+++N   + +  ++A+ + + +
Sbjct: 541 ITYSSMINGLCKQSRLDEATQMFDSM 566



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 156/309 (50%), Gaps = 32/309 (10%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
            +  +++F DM+R+   P  I FN L+ V  R    +   +L+ +M  + I  D++++N 
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM---- 395
           L+   C  +++  A     ++      P+VVT+ST++ G     R+ +AL++F +M    
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPN 177

Query: 396 -------------------------KFLGIGL--DRVSYNTVLSIYAKLGRFEEALLVCK 428
                                    + +  GL  ++++Y T++    K+G    AL + +
Sbjct: 178 VVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLR 237

Query: 429 EMES-SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           +ME  S I+ + V Y+A++ G  K G++ +   ++ +M+   + P+L TY+ +ID +   
Sbjct: 238 KMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSS 297

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G + EA ++ +E  +  +  +VV YSALI+A  K      A  L DEM   GI PN +TY
Sbjct: 298 GRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITY 357

Query: 548 NSIIDAFGR 556
           NS+ID F +
Sbjct: 358 NSMIDGFCK 366



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 157/320 (49%), Gaps = 16/320 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI    +  ++D A+++F     +G    V+ F+ LI  Y  +    +   + + M  
Sbjct: 358 NSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTE 417

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
             L  +  TYN +I   C  G  D    +++   M+ +GV PD +T N+LL  +C  G L
Sbjct: 418 TGLVADTTTYNTLIHGFCLVG--DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 475

Query: 315 WEAARNLFNEMVH-----------RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
            +A   +F  M              G++ D+ TYN L+  +    +   A E+  EMP +
Sbjct: 476 KDALE-MFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHR 534

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
            I PN +TYS+MI+G  K  RLD+A  MF  M       D V++NT++S Y K GR ++ 
Sbjct: 535 GIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDG 594

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
           L +  EM   GI  DA+TY  L+ G+ K G  +    +F++M +  V P+ +T  +++ V
Sbjct: 595 LELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTV 654

Query: 484 YSKGGLYKEAMQIFREFKQA 503
                  K A+ +  + + +
Sbjct: 655 LWSKEELKRAVAMLEDLQMS 674



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 148/335 (44%), Gaps = 81/335 (24%)

Query: 378 GYAKAGRLDDALNMFSEM-------------KFLG----------------------IGL 402
           G+ +   L+DA+++FS+M             K +G                      I  
Sbjct: 51  GFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPC 110

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D  S+N ++  +    +   AL    ++   G + D VT++ LL G   + +  E   +F
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF 170

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            QM      PN++T++TL++   + G   EA+ +     + GL+ + + Y  ++D +CK 
Sbjct: 171 HQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKI 226

Query: 523 GLVESAVSLLDEMTKEG-IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
           G   SA++LL +M +   I+PNVV Y++IID   +               G+  ++ NL 
Sbjct: 227 GDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKD--------------GRHSDAHNLY 272

Query: 582 AMCSQDDKDVQEAG-----RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
                   ++QE G      T N +I  F       +G+  +  R  QE+L         
Sbjct: 273 T-------EMQEKGIFPDLFTYNCMIDGFCS-----SGRWSEAQRLLQEML--------- 311

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            + KI PNVVT+SA++NA  +   F +A  L +E+
Sbjct: 312 -ERKINPNVVTYSALINAYVKERKFFEAEELYDEM 345



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 115/263 (43%), Gaps = 40/263 (15%)

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
           E   +G R +++    L  G+ +    ++   +F  M      P+++ ++ L+ V  +  
Sbjct: 35  ESGEAGFRGESL---KLRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRME 91

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
                + ++++ ++  +  DV  ++ LI   C    +  A+S   ++TK G +P+VVT++
Sbjct: 92  RPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFS 151

Query: 549 SIIDAFGRSATTECTVDDVER--DLGKQKESAN-------LDAMCSQD---------DKD 590
           +++          C  D V    DL  Q    N       ++ +C +          D+ 
Sbjct: 152 TLLHGL-------CVEDRVSEALDLFHQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRM 204

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK-IKPNVVTFS 649
           V++ G   NQI   +G +V      G        + +  L + +KM ++  IKPNVV +S
Sbjct: 205 VED-GLQPNQI--TYGTIVDGMCKIG--------DTVSALNLLRKMEEMSHIKPNVVIYS 253

Query: 650 AILNACSRCNSFEDASMLLEELR 672
           AI++   +     DA  L  E++
Sbjct: 254 AIIDGLWKDGRHSDAHNLYTEMQ 276



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 11/138 (7%)

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQV-YGVAHGL 685
           L +F +M     +PNVVTF+ ++N   R     +A  LL+ +    L  NQ+ YG     
Sbjct: 167 LDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 222

Query: 686 LMGYRDNIWVQALSLFDEVKLMDSSTASA-FYNALTDMLWHFGQKRGAQLVVLEGKRRQV 744
           +    D   V AL+L  +++ M     +   Y+A+ D LW  G+   A  +  E + + +
Sbjct: 223 MCKIGDT--VSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGI 280

Query: 745 WENVWSESCLDLHLMSSG 762
           + ++++ +C+     SSG
Sbjct: 281 FPDLFTYNCMIDGFCSSG 298


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 187/358 (52%), Gaps = 5/358 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR-SGYCQEAISVFNSMKRY 257
           +I  L   G++  A  +F+  L+ G   +V  +S L+ A  + SGY ++A+++ + M+  
Sbjct: 257 LIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGY-RQAMALLDEMRAK 315

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +P++VTYN +I+A C +G VD    + I  ++  +G +PD +T+  +L        W+
Sbjct: 316 GCEPDIVTYNVLINAMCNEGDVD--EALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWK 373

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               L  EM       D  T+NT++ ++C+   +D A E++  M       ++VTYS+++
Sbjct: 374 EVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSIL 433

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG    GR+DDA+ + S +K  G   D ++Y TVL       ++E A  +  EM  S   
Sbjct: 434 DGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCP 493

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VT+N ++    ++G  D   R+ EQM  +  SP+++TY+ +ID         +AM++
Sbjct: 494 PDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMEL 553

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             + +  G K D+V ++ L+  LC     E A  L+  M +    P+ +T+N++I + 
Sbjct: 554 LSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSL 611



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 202/406 (49%), Gaps = 15/406 (3%)

Query: 163 LRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE 222
           LR L  RGE  +A+  F        R        + +I  L   G+V  A+ +F      
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL--- 213

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G   TV  ++ +++ Y R+G  ++A  + N M      P+  T+N +I A C +G +   
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRI--P 268

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
             + +FDDML  G  P  +T++ LL A C   G +  A  L +EM  +G + DI TYN L
Sbjct: 269 DALAVFDDMLHRGCSPSVVTYSILLDATCKESG-YRQAMALLDEMRAKGCEPDIVTYNVL 327

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           ++A+C    +D A  I++ +P+    P+ VTY+ ++     + R  +   + +EM     
Sbjct: 328 INAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D V++NT+++   + G  + A+ V   M   G   D VTY+++L G    G+ D+   
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +  ++K+    P+ + Y+T++        ++ A ++  E   +    D V ++ ++ +LC
Sbjct: 448 LLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLC 507

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
           + GLV+ A+ ++++M++ G  P++VTYN IID        E  +DD
Sbjct: 508 QKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGL----CNESCIDD 549



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 198/425 (46%), Gaps = 9/425 (2%)

Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           +IL       C  D   YT +L+ L     W +  +  A         ++     + +++
Sbjct: 342 NILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEV--TFNTIVT 399

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            L + G VD A  + +     G    +  +S+++      G   +A+ + + +K Y  KP
Sbjct: 400 SLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKP 459

Query: 262 NLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           + + Y  V+   C      ++   E+  +ML +   PD +TFN+++A   + GL + A  
Sbjct: 460 DTIAYTTVLKGLCSTE--QWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIR 517

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           +  +M   G   DI TYN ++D +C  + +D A E+++++ +    P++VT++T++ G  
Sbjct: 518 VVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLC 577

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
              R +DA  + + M       D +++NTV++   + G   +A+   K M  +G   ++ 
Sbjct: 578 GVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSS 637

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY+ ++    K GK      +   M     +P+L+TY+T+I   +K G  +EA+ + R  
Sbjct: 638 TYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVM 695

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
              GL  D   Y +L   +C+    + AV +L  +   G+ P+   YN ++  F R   T
Sbjct: 696 VSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRT 755

Query: 561 ECTVD 565
           +  +D
Sbjct: 756 DLAID 760



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 222/486 (45%), Gaps = 50/486 (10%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNT--VYAFSALISAYGRSGYCQEAISV 250
           G+ A   +  L + G++D A  +F++  + G  N   V   + LI      G   +A  V
Sbjct: 150 GEGAKRRLRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERV 209

Query: 251 FNSMKRYNLKPNLVTYNAVIDA-CGKGGV-DFKHVVEIFDDMLRNGVQ--PDRITFNSLL 306
           F ++        +VTYN +++  C  G + D + ++        NG+   PD  TFN L+
Sbjct: 210 FAALGP---SATVVTYNTMVNGYCRAGRIEDARRLI--------NGMPFPPDTFTFNPLI 258

Query: 307 -AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
            A+C RG + +A   +F++M+HRG    + TY+ LLDA CK +    A  ++ EM AK  
Sbjct: 259 RALCVRGRIPDALA-VFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGC 317

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            P++VTY+ +I+     G +D+ALN+ S +   G   D V+Y  VL       R++E   
Sbjct: 318 EPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEE 377

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           +  EM S+    D VT+N ++    +QG  D    + + M       +++TYS+++D   
Sbjct: 378 LLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLC 437

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
             G   +A+++    K  G K D + Y+ ++  LC     E A  L+ EM      P+ V
Sbjct: 438 DVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEV 497

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
           T+N+++ +  +       VD   R + +  E+      CS D              I  +
Sbjct: 498 TFNTVVASLCQKG----LVDRAIRVVEQMSENG-----CSPD--------------IVTY 534

Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
             ++      G     C  + + +L   Q       KP++VTF+ +L      + +EDA 
Sbjct: 535 NCII-----DGLCNESCIDDAMELLSDLQ---SCGCKPDIVTFNTLLKGLCGVDRWEDAE 586

Query: 666 MLLEEL 671
            L+  +
Sbjct: 587 QLMANM 592



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 199/435 (45%), Gaps = 44/435 (10%)

Query: 242 GYCQEAISVFNSMKRYNLK--PNLVTYNAVID-ACGKGGV-DFKHVVEIFDDMLRNGVQP 297
           G   EA+ +F+SM     +  P +V  N +I   C  G V D + V          G   
Sbjct: 164 GEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL------GPSA 217

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
             +T+N+++    R G  E AR L N M       D FT+N L+ A+C   ++  A  + 
Sbjct: 218 TVVTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDALAVF 274

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
            +M  +  SP+VVTYS ++D   K      A+ +  EM+  G   D V+YN +++     
Sbjct: 275 DDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNE 334

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G  +EAL +   + S G + DAVTY  +L       ++ EV  +  +M ++  +P+ +T+
Sbjct: 335 GDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTF 394

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           +T++    + GL   A+++     + G  AD+V YS+++D LC  G V+ AV LL  +  
Sbjct: 395 NTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKS 454

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
            G +P+ + Y +++          C+ +  ER      E    + +CS    D       
Sbjct: 455 YGCKPDTIAYTTVLKGL-------CSTEQWER-----AEELMAEMLCSDCPPDEV----- 497

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
                  F  +VA    +G  +   R        V ++M +    P++VT++ I++    
Sbjct: 498 ------TFNTVVASLCQKGLVDRAIR--------VVEQMSENGCSPDIVTYNCIIDGLCN 543

Query: 658 CNSFEDASMLLEELR 672
            +  +DA  LL +L+
Sbjct: 544 ESCIDDAMELLSDLQ 558



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 150/311 (48%), Gaps = 5/311 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           F+ ++++  + G    AI V   M      P++VTYN +ID  C +  +D    +E+  D
Sbjct: 499 FNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCID--DAMELLSD 556

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           +   G +PD +TFN+LL        WE A  L   M+      D  T+NT++ ++C+   
Sbjct: 557 LQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGL 616

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  A E +  M      PN  TYS ++D   KAG+   AL + S M       D ++YNT
Sbjct: 617 LTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMT--NGTPDLITYNT 674

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           V+S   K G+ EEAL + + M S+G+  D  TY +L  G  ++   D   RM  +++   
Sbjct: 675 VISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTG 734

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           +SP+   Y+ ++  + +      A+  F     +G   D   Y  L++AL   GL++ A 
Sbjct: 735 LSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAK 794

Query: 530 SLLDEMTKEGI 540
            LL  +   G+
Sbjct: 795 RLLASLCSLGV 805



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 173/403 (42%), Gaps = 40/403 (9%)

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
           F+ MA    +N  P VV  + +I      GR+ DA  +F+    LG     V+YNT+++ 
Sbjct: 173 FDSMASGGGRNCPP-VVPCNILIKRLCSDGRVSDAERVFAA---LGPSATVVTYNTMVNG 228

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           Y + GR E+A  +   M       D  T+N L+     +G+  +   +F+ M     SP+
Sbjct: 229 YCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPS 285

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           ++TYS L+D   K   Y++AM +  E +  G + D+V Y+ LI+A+C  G V+ A+++L 
Sbjct: 286 VVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILS 345

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
            +   G +P+ VTY  ++ +   S   +    +VE  L +   +      C+ D+     
Sbjct: 346 NLPSHGCKPDAVTYTPVLKSLCGSERWK----EVEELLAEMTSNN-----CAPDEV---- 392

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
                      F  +V     QG  +          + V   M +     ++VT+S+IL+
Sbjct: 393 ----------TFNTIVTSLCQQGLVDR--------AIEVVDHMSEHGCVADIVTYSSILD 434

Query: 654 ACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSST 711
                   +DA  LL  L+ +  +   +A+  ++        W +A  L  E+   D   
Sbjct: 435 GLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPP 494

Query: 712 ASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
               +N +   L   G    A  VV +        ++ + +C+
Sbjct: 495 DEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCI 537


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 152/575 (26%), Positives = 268/575 (46%), Gaps = 28/575 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI +L +  ++D A  +FE           YA++ +I  YG +G   EA S+    + 
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336

Query: 257 YNLKPNLVTYNAVIDACGK-GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               P+++ YN ++    K G VD    + +F++M ++   P+  T+N L+ +  R G  
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVD--EALRVFEEMKKDAA-PNLSTYNILIDMLCRAGKL 393

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  L + M   G+  ++ T N ++D +CK  ++D A  I  +M  K  +P+ +T+ ++
Sbjct: 394 DCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSL 453

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K GR+DDA  ++ +M       + + Y +++  +   GR E+   + K+M +   
Sbjct: 454 IDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNC 513

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D    N  +    K G+ ++ R MFE++K+    P+  +YS LI    K G   E  +
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYE 573

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F   K+ G   D   Y+ +ID  CK G V  A  LL+EM  +G  P VVTY S+ID   
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
           +    +      E    K+ E  N+    S  D    + GR D   +     ++ E   +
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIE-LNVVIYSSLID-GFGKVGRIDEAYL-----ILEELMQK 686

Query: 616 GKKENRCR-----------QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           G   N              +EI   L  FQ M +LK  PN VT+  ++N   +   F  A
Sbjct: 687 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746

Query: 665 SMLLEELRLFDNQVYGVAHGLL---MGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
            +  +E++    +   +++  +   +    NI  +A +LFD  K       SA YNA+ +
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNI-AEAGALFDRFKANGGVPDSACYNAMIE 805

Query: 722 MLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDL 756
            L +  +   A  +  E +RR +  ++ +++C+ L
Sbjct: 806 GLSNGNRAMDAFSLFEETRRRGL--HIHNKTCVVL 838



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 197/437 (45%), Gaps = 43/437 (9%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASA---MISILGRLGKVDLAKNI 215
           Y  +L  L   G+  +A++ F      EE K D     S    +I +L R GK+D A  +
Sbjct: 346 YNCILTCLRKMGKVDEALRVF------EEMKKDAAPNLSTYNILIDMLCRAGKLDCAFEL 399

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
            ++    G    V   + ++    +S    EA ++F  M      P+ +T+ ++ID  GK
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGK 459

Query: 276 -GGVDFKHVV---------------------------------EIFDDMLRNGVQPDRIT 301
            G VD  + +                                 +I+ DM+     PD   
Sbjct: 460 VGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQL 519

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
            N+ +    + G  E  R +F E+  R    D  +Y+ L+  + K    +  +E+   M 
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            +    +   Y+ +IDG+ K G+++ A  +  EMK  G     V+Y +V+   AK+ R +
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           EA ++ +E +S  I  + V Y++L+ G+GK G+ DE   + E++    ++PN+ T+++L+
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLL 699

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           D   K     EA+  F+  K+     + V Y  LI+ LCK      A     EM K+G++
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759

Query: 542 PNVVTYNSIIDAFGRSA 558
           P+ ++Y ++I    ++ 
Sbjct: 760 PSTISYTTMISGLAKAG 776



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 265/596 (44%), Gaps = 41/596 (6%)

Query: 180 AFAVKREERKNDQGKLASAMISILGRLGKV---DLAKNIFETALNEGYGNTVYAFSALIS 236
            F V +  RK       SA  +++G    V   D+   +F+     GY  TV+ F+ LI 
Sbjct: 152 GFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIR 211

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK-GGVDFKHVVEIFDDMLRNGV 295
            + + G    A+S+ + MK  +L  ++V YN  ID+ GK G VD     + F ++  NG+
Sbjct: 212 GFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAW--KFFHEIEANGL 269

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +PD +T+ S++ V  +    + A  +F  +         + YNT++       + D A+ 
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++    AK   P+V+ Y+ ++    K G++D+AL +F EMK      +  +YN ++ +  
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLSTYNILIDMLC 388

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           + G+ + A  +   M+ +G+  +  T N ++    K  K DE   +FEQM     +P+ +
Sbjct: 389 RAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEI 448

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           T+ +LID   K G   +A +I+ +   +  + + ++Y++LI     +G  E    +  +M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
             +   P++   N+ +D   ++   E             K  A  + + S+  + V +A 
Sbjct: 509 VNQNCSPDLQLLNTYMDCMFKAGEPE-------------KGRAMFEEIKSR--RFVPDAR 553

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
                 I + G + A  A +  +     +E  C+L             +   ++ +++  
Sbjct: 554 SYS---ILIHGLIKAGFANETYELFYSMKEQGCVL-------------DTRAYNIVIDGF 597

Query: 656 SRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNI--WVQALSLFDEVKLMDSSTAS 713
            +C     A  LLEE++    +   V +G ++     I    +A  LF+E K        
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657

Query: 714 AFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS-ESCLDLHLMSSGAARAMV 768
             Y++L D     G+   A L++ E  ++ +  NV++  S LD  + +     A+V
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALV 713



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 206/438 (47%), Gaps = 7/438 (1%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           I ++ ++K+C  D+ TF  L+  LG  G    A + +   +  + R N    + +++I  
Sbjct: 434 IFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTN--SIVYTSLIKN 491

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
               G+ +    I++  +N+     +   +  +    ++G  ++  ++F  +K     P+
Sbjct: 492 FFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPD 551

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
             +Y+ +I    K G       E+F  M   G   D   +N ++    + G    A  L 
Sbjct: 552 ARSYSILIHGLIKAGFA-NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            EM  +G +  + TY +++D + K  ++D A+ +  E  +K I  NVV YS++IDG+ K 
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           GR+D+A  +  E+   G+  +  ++N++L    K     EAL+  + M+      + VTY
Sbjct: 671 GRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             L+ G  K  K+++    +++M+   + P+ ++Y+T+I   +K G   EA  +F  FK 
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE- 561
            G   D   Y+A+I+ L        A SL +E  + G+  +  T   ++D   ++   E 
Sbjct: 791 NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQ 850

Query: 562 -CTVDDVERDLGKQKESA 578
              V  V R+ GK + +A
Sbjct: 851 AAIVGAVLRETGKARHAA 868



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/488 (22%), Positives = 206/488 (42%), Gaps = 34/488 (6%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           +F  + +I  +M   G  P   T   ++  C +        ++   M           Y 
Sbjct: 113 NFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYT 172

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+ A       D+   +  +M      P V  ++T+I G+AK GR+D AL++  EMK  
Sbjct: 173 TLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS 232

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            +  D V YN  +  + K+G+ + A     E+E++G++ D VTY +++G   K  + DE 
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             MFE ++ +   P    Y+T+I  Y   G + EA  +    +  G    V+ Y+ ++  
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
           L K G V+ A+ + +EM K+   PN+ TYN +ID   R+   +C  +   RD        
Sbjct: 353 LRKMGKVDEALRVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDCAFE--LRD-------- 401

Query: 579 NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
                       +Q+AG   N  ++    +V       K +  C         +F++M  
Sbjct: 402 -----------SMQKAGLFPN--VRTVNIMVDRLCKSQKLDEAC--------AIFEQMDY 440

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQ 696
               P+ +TF ++++   +    +DA  + E++   D +   + +  L+   +       
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500

Query: 697 ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDL 756
              ++ ++   + S      N   D ++  G+    + +  E K R+   +  S S L  
Sbjct: 501 GHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIH 560

Query: 757 HLMSSGAA 764
            L+ +G A
Sbjct: 561 GLIKAGFA 568


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 235/503 (46%), Gaps = 55/503 (10%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I ++ + G ++ AK +F+  +  G      A+++LI  Y R    ++   +   MK+ N+
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413

Query: 260 KPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             +  TY  V+   C  G +D  +   I  +M+ +G +P+ + + +L+    +   +  A
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAY--NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +  EM  +GI  DIF YN+L+  + K  +MD A   + EM    + PN  TY   I G
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y +A     A     EM+  G+  ++V    +++ Y K  +  EA    + M   GI  D
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGD 591

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           A TY  L+ G  K  K D+   +F +M+   ++P++ +Y  LI+ +SK G  ++A  IF 
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E  + GL  +V++Y+ L+   C++G +E A  LLDEM+ +G+ PN VTY +IID + +S 
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711

Query: 559 TTE----------------------------CTVDDVERDL--------GKQKESANLDA 582
                                          C ++DVER +        G    +A  +A
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNA 771

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI----LCILG------- 631
           + +     V + G+T+ +  +V  +L+     +  K N     I    LC  G       
Sbjct: 772 LINW----VFKFGKTELK-TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKE 826

Query: 632 VFQKMHKLKIKPNVVTFSAILNA 654
           +F +M    + P V+T++++LN 
Sbjct: 827 LFHQMQNANLMPTVITYTSLLNG 849



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 227/517 (43%), Gaps = 38/517 (7%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD A  + E+ + +G     Y +  LI    +    ++A S+   M    +  +  TY+ 
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           +ID   KG  +      +  +M+ +G+      ++  + V S+ G+ E A+ LF+ M+  
Sbjct: 318 LIDGLLKGR-NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G+      Y +L++  C+   +   +E++ EM  +NI  +  TY T++ G   +G LD A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            N+  EM   G   + V Y T++  + +  RF +A+ V KEM+  GI  D   YN+L+ G
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             K  + DE R    +M  + + PN  TY   I  Y +   +  A +  +E ++ G+  +
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            VL + LI+  CK   V  A S    M  +GI  +  TY  +++   ++      VDD E
Sbjct: 557 KVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND----KVDDAE 612

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA--EKAGQGKKENRCRQEI 626
               + +                   G+     +  +G L+    K G  +K +      
Sbjct: 613 EIFREMR-------------------GKGIAPDVFSYGVLINGFSKLGNMQKAS------ 647

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
                +F +M +  + PNV+ ++ +L    R    E A  LL+E+ +       V +  +
Sbjct: 648 ----SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703

Query: 687 M-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
           + GY +     +A  LFDE+KL      S  Y  L D
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 178/373 (47%), Gaps = 44/373 (11%)

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           + LI+ Y +     EA S + SM    +  +  TY  +++   K         EIF +M 
Sbjct: 561 TGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND-KVDDAEEIFREMR 619

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
             G+ PD  ++  L+   S+ G  + A ++F+EMV  G+  ++  YN LL   C+  +++
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A E++ EM  K + PN VTY T+IDGY K+G L +A  +F EMK  G+  D   Y T++
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 412 SIYAKLGRFEEALLV-------C-------------------KEMESSGIRK-------- 437
               +L   E A+ +       C                    E+++  + +        
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799

Query: 438 ----DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
               + VTYN ++    K+G  +  + +F QM+   + P ++TY++L++ Y K G   E 
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM-----TKEGIRPNVVTYN 548
             +F E   AG++ D ++YS +I+A  K G+   A+ L+D+M       +G + ++ T  
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919

Query: 549 SIIDAFGRSATTE 561
           +++  F +    E
Sbjct: 920 ALLSGFAKVGEME 932



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 192/392 (48%), Gaps = 18/392 (4%)

Query: 191 DQGKLASA-----MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           DQG L  A     +++ L +  KVD A+ IF     +G    V+++  LI+ + + G  Q
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +A S+F+ M    L PN++ YN ++    + G + +   E+ D+M   G+ P+ +T+ ++
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG-EIEKAKELLDEMSVKGLHPNAVTYCTI 703

Query: 306 L-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           +   C  G L EA R LF+EM  +G+  D F Y TL+D  C+   ++ A  I      K 
Sbjct: 704 IDGYCKSGDLAEAFR-LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKG 761

Query: 365 ISPNVVTYSTMIDGYAKAGRLD---DALNMFSEMKFLGIGL-DRVSYNTVLSIYAKLGRF 420
            + +   ++ +I+   K G+ +   + LN   +  F   G  + V+YN ++    K G  
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           E A  +  +M+++ +    +TY +LL GY K G+  E+  +F++  A  + P+ + YS +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881

Query: 481 IDVYSKGGLYKEAM----QIF-REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           I+ + K G+  +A+    Q+F +     G K  +    AL+    K G +E A  +++ M
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
            +    P+  T   +I+    S+      D V
Sbjct: 942 VRLQYIPDSATVIELINESCISSNQRVEADAV 973



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 99/480 (20%), Positives = 197/480 (41%), Gaps = 115/480 (23%)

Query: 321 LFNEMVHRG-IDQDIFTYNT---------------LLDAICKGAQMDLAFEIMAEMPAKN 364
           LF+  + +G I++ +F +++               LLDA+ +  ++DL +++   M  +N
Sbjct: 157 LFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERN 216

Query: 365 ISPNVVTYSTMIDGYAKAG---------------------RLDDALNMFSEMKFLGIGLD 403
           +  +V TY  +I  + +AG                      +D AL +   M   G+   
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPL 276

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY-------------- 449
           + +Y+ ++    K+ R E+A  +  EM+S G+  D  TY+ L+ G               
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336

Query: 450 ---------------------GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
                                 K+G  ++ + +F+ M A  + P    Y++LI+ Y +  
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
             ++  ++  E K+  +      Y  ++  +C +G ++ A +++ EM   G RPNVV Y 
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456

Query: 549 SIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
           ++I  F +++       D  R L + KE     D  C             ++ II +   
Sbjct: 457 TLIKTFLQNS----RFGDAMRVLKEMKEQGIAPDIFC------------YNSLIIGL--- 497

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
                  + K+ +  R  ++       +M +  +KPN  T+ A ++     + F  A   
Sbjct: 498 ------SKAKRMDEARSFLV-------EMVENGLKPNAFTYGAFISGYIEASEFASADKY 544

Query: 668 LEELR---LFDNQVYGVAHGLLMGY-RDNIWVQALSLF----DEVKLMDSSTASAFYNAL 719
           ++E+R   +  N+V  +  GL+  Y +    ++A S +    D+  L D+ T +   N L
Sbjct: 545 VKEMRECGVLPNKV--LCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 189/359 (52%), Gaps = 1/359 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G V++ + + +    +G    V  ++A I  Y +         +   M++  +  N
Sbjct: 235 LCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACN 294

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           +VTY  +I      G   +    +F++M   G++ D   + S+++   R G  + A  LF
Sbjct: 295 VVTYTLLIHGFSNIG-KIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLF 353

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           +EM  +G+     TY  L+  +CK  QM+ A  ++ EM  K I  N V ++T+IDGY ++
Sbjct: 354 DEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCES 413

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G +D+AL +   M+  G+  D  +YN++ S   KL R +EA  +   M   G+  + +++
Sbjct: 414 GMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSF 473

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             L+  Y K+G + E +R+F +M+     PN++TY+ LID YSK G  KEA ++  E + 
Sbjct: 474 TTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELEN 533

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            GL  DV   ++LI   C +G V+ A+ L DEM + G+ PNVVTY ++I    +   +E
Sbjct: 534 RGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSE 592



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 182/356 (51%), Gaps = 5/356 (1%)

Query: 202 ILGRLGKVDLA--KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I G   ++DL     I      EG    V  ++ LI  +   G  +EA  +F  M+   +
Sbjct: 267 IEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGI 326

Query: 260 KPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           + ++  Y ++I   C  G V  K  + +FD+M   G+ P   T+ +L+    + G  EAA
Sbjct: 327 EADVYVYTSIISCNCRSGNV--KRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAA 384

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           + L NEM  +GID +   +NTL+D  C+   +D A  +   M  K +  +V  Y+++  G
Sbjct: 385 QMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASG 444

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K  R D+A  +   M   G+  + +S+ T++ IY K G F EA  V +EME  G   +
Sbjct: 445 LCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPN 504

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            +TYN L+ GY K+G   E  ++ ++++   + P++ T ++LI      G    A+++F 
Sbjct: 505 IITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFD 564

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           E  Q GL  +VV Y+A+I  L K+G  E A  L DEM + G+ P+   Y+S++ + 
Sbjct: 565 EMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 176/323 (54%), Gaps = 1/323 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I     +GK++ A+ +FE    +G    VY ++++IS   RSG  + A+ +F+ M  
Sbjct: 299 TLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTD 358

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P+  TY A+I    K G   +    + ++M   G+  + + FN+L+      G+ +
Sbjct: 359 KGLIPSAHTYGALIHGVCKAG-QMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD 417

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L   M  +G++ D+F YN++   +CK  + D A  ++  M  + +SPN ++++T+I
Sbjct: 418 EALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLI 477

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y K G   +A  +F EM+  G   + ++YN ++  Y+K G  +EA  +  E+E+ G+ 
Sbjct: 478 DIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLI 537

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  T  +L+ G    GK D   ++F++M    + PN++TY+ +I   SK G  +EA ++
Sbjct: 538 PDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKL 597

Query: 497 FREFKQAGLKADVVLYSALIDAL 519
           + E K+ GL  D  +YS+L+ +L
Sbjct: 598 YDEMKETGLTPDDTVYSSLVGSL 620



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 206/439 (46%), Gaps = 53/439 (12%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
           F   +E F+ M + G   D  +    L    RGG  ++    F  MV+  ++  +++   
Sbjct: 171 FGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 230

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK------------------ 381
           +LD +CK   +++  ++M E+ AK +  NVVTY+  I+GY K                  
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 290

Query: 382 -----------------AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
                             G++++A  +F EM+  GI  D   Y +++S   + G  + AL
Sbjct: 291 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 350

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
           ++  EM   G+   A TY AL+ G  K G+ +  + +  +M+   +  N + ++TLID Y
Sbjct: 351 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 410

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            + G+  EA+++    ++ GL++DV  Y+++   LCK    + A  LL  M + G+ PN 
Sbjct: 411 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 470

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
           +++ ++ID + +    E    + +R   + +E  N+  + +    +V   G +    +K 
Sbjct: 471 MSFTTLIDIYCK----EGNFVEAKRVFREMEEKGNVPNIITY---NVLIDGYSKRGNMKE 523

Query: 605 FGQLVAEKAGQGKKEN--RCRQEI--LCI-------LGVFQKMHKLKIKPNVVTFSAILN 653
             +L  E   +G   +   C   I   CI       L +F +M +  + PNVVT++A+++
Sbjct: 524 AHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMIS 583

Query: 654 ACSRCNSFEDASMLLEELR 672
             S+    E+A  L +E++
Sbjct: 584 GLSKDGRSEEAFKLYDEMK 602



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 164/329 (49%), Gaps = 5/329 (1%)

Query: 154 CGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK 213
           C    YT L+    N G+  +A +   F   RE+       + +++IS   R G V  A 
Sbjct: 293 CNVVTYTLLIHGFSNIGKIEEAQR--LFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 350

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA- 272
            +F+   ++G   + + + ALI    ++G  + A  + N M+   +  N V +N +ID  
Sbjct: 351 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 410

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C  G VD    +++   M + G++ D   +NS+ +   +    + A+ L   MV RG+  
Sbjct: 411 CESGMVDEALRLQVV--MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSP 468

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           +  ++ TL+D  CK      A  +  EM  K   PN++TY+ +IDGY+K G + +A  + 
Sbjct: 469 NTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLK 528

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            E++  G+  D  +  +++      G+ + AL +  EM   G+  + VTY A++ G  K 
Sbjct: 529 DELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKD 588

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           G+ +E  +++++MK   ++P+   YS+L+
Sbjct: 589 GRSEEAFKLYDEMKETGLTPDDTVYSSLV 617



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 192/427 (44%), Gaps = 42/427 (9%)

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           F+ L  V +   ++  A   F  M  +G   D  +    L A+ +G Q+D        M 
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 217

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK---LG 418
             ++   V + + ++DG  K G ++    +  E+   G+  + V+YN  +  Y K   LG
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
              E L +   ME  G+  + VTY  L+ G+   GK +E +R+FE+M+   +  ++  Y+
Sbjct: 278 GVAEILTL---MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYT 334

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           ++I    + G  K A+ +F E    GL      Y ALI  +CK G +E+A  L++EM  +
Sbjct: 335 SIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGK 394

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTV--------DDVERDLGKQKESANLDAMCSQDDKD 590
           GI  N V +N++ID +  S   +  +          +E D+      A+   +C  + KD
Sbjct: 395 GIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIAS--GLCKLNRKD 452

Query: 591 --------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
                   + E G + N +   F  L+     +G      R        VF++M +    
Sbjct: 453 EAKGLLFSMVERGVSPNTM--SFTTLIDIYCKEGNFVEAKR--------VFREMEEKGNV 502

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEEL--RLFDNQVY---GVAHGLLMGYRDNIWVQA 697
           PN++T++ +++  S+  + ++A  L +EL  R     VY    + HG  +   D     A
Sbjct: 503 PNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECI---DGKVDMA 559

Query: 698 LSLFDEV 704
           L LFDE+
Sbjct: 560 LKLFDEM 566



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 151/354 (42%), Gaps = 41/354 (11%)

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           ++ +  +YA    F EAL   + ME  G   D  +    L    + G+ D   R F +M 
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 217

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V   + + + ++D   K G  +   ++  E    G+KA+VV Y+A I+   K   + 
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
               +L  M KEG+  NVVTY  +I  F               ++GK +E+  L      
Sbjct: 278 GVAEILTLMEKEGVACNVVTYTLLIHGFS--------------NIGKIEEAQRL------ 317

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
             ++++E G   +  + V+  +++     G   N  R  +L     F +M    + P+  
Sbjct: 318 -FEEMREKGIEAD--VYVYTSIISCNCRSG---NVKRALVL-----FDEMTDKGLIPSAH 366

Query: 647 TFSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGYRDNIWVQA---LSL 700
           T+ A+++   +    E A ML+ E++   +  N V  + + L+ GY ++  V     L +
Sbjct: 367 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPV--IFNTLIDGYCESGMVDEALRLQV 424

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
             E K ++S   +  YN++   L    +K  A+ ++     R V  N  S + L
Sbjct: 425 VMEKKGLESDVFA--YNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 476


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 155/585 (26%), Positives = 263/585 (44%), Gaps = 49/585 (8%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            +  LI  Y R G  Q+++ +F  M  Y   P++ T NA++ +  K G D   V     +
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS-VWSFLKE 183

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           ML+  + PD  TFN L+ V    G +E +  L  +M   G    I TYNT+L   CK  +
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              A E++  M +K +  +V TY+ +I    ++ R+     +  +M+   I  + V+YNT
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +++ ++  G+   A  +  EM S G+  + VT+NAL+ G+  +G + E  +MF  M+A  
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           ++P+ ++Y  L+D   K   +  A   +   K+ G+    + Y+ +ID LCKNG ++ AV
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVERDLGKQKESANLDAM--- 583
            LL+EM+K+GI P++VTY+++I+ F   GR  T +  V  + R +G          +   
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR-VGLSPNGIIYSTLIYN 482

Query: 584 -----CSQDDKDVQEA----GRTDNQIIKVFGQLV-----AEKAGQGKKENRCRQ----- 624
                C ++   + EA    G T +     F  LV     A K  + ++  RC       
Sbjct: 483 CCRMGCLKEAIRIYEAMILEGHTRDHF--TFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540

Query: 625 -----------------EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
                            E L    VF +M K+   P   T+ ++L    +     +A   
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600

Query: 668 LEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWH 725
           L+ L      V  V +  L+    +     +A+SLF E+        S  Y +L   L  
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660

Query: 726 FGQKRGAQLVVLEGKRR-QVWENVWSESCLDLHLMSSGAARAMVH 769
            G+   A L   E + R  V  N    +C    +  +G  +A ++
Sbjct: 661 KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 705



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 214/467 (45%), Gaps = 35/467 (7%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GKV +A  +    L+ G       F+ALI  +   G  +EA+ +F  M+   L P+ V+Y
Sbjct: 312 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 371

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
             ++D   K   +F      +  M RNGV   RIT+  ++    + G  + A  L NEM 
Sbjct: 372 GVLLDGLCKNA-EFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             GID DI TY+ L++  CK  +   A EI+  +    +SPN + YST+I    + G L 
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A+ ++  M   G   D  ++N +++   K G+  EA    + M S GI  + V+++ L+
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GYG  G+  +   +F++M      P   TY +L+    KGG  +EA +  +        
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 610

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            D V+Y+ L+ A+CK+G +  AVSL  EM +  I P+  TY S+I    R   T   +  
Sbjct: 611 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-- 668

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
                 K+ E+                     N+++         KAGQ K         
Sbjct: 669 ---LFAKEAEA---------------RGNVLPNKVMYTCFVDGMFKAGQWKA-------- 702

Query: 627 LCILGVF--QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               G++  ++M  L   P++VT +A+++  SR    E  + LL E+
Sbjct: 703 ----GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 184/361 (50%), Gaps = 3/361 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I++L   G  + +  + +     GY  T+  ++ ++  Y + G  + AI + + MK   
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258

Query: 259 LKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           +  ++ TYN +I D C    +   ++  +  DM +  + P+ +T+N+L+   S  G    
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYL--LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 316

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  L NEM+  G+  +  T+N L+D          A ++   M AK ++P+ V+Y  ++D
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 376

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K    D A   +  MK  G+ + R++Y  ++    K G  +EA+++  EM   GI  
Sbjct: 377 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 436

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D VTY+AL+ G+ K G++   + +  ++    +SPN + YSTLI    + G  KEA++I+
Sbjct: 437 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 496

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
                 G   D   ++ L+ +LCK G V  A   +  MT +GI PN V+++ +I+ +G S
Sbjct: 497 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 556

Query: 558 A 558
            
Sbjct: 557 G 557



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 184/372 (49%), Gaps = 3/372 (0%)

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
           DLA+  +      G       ++ +I    ++G+  EA+ + N M +  + P++VTY+A+
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 444

Query: 270 IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
           I+   K G  FK   EI   + R G+ P+ I +++L+  C R G  + A  ++  M+  G
Sbjct: 445 INGFCKVG-RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
             +D FT+N L+ ++CK  ++  A E M  M +  I PN V++  +I+GY  +G    A 
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 563

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
           ++F EM  +G      +Y ++L    K G   EA    K + +     D V YN LL   
Sbjct: 564 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG-LKAD 508
            K G   +   +F +M    + P+  TY++LI    + G    A+   +E +  G +  +
Sbjct: 624 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 683

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            V+Y+  +D + K G  ++ +   ++M   G  P++VT N++ID + R    E T +D+ 
Sbjct: 684 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT-NDLL 742

Query: 569 RDLGKQKESANL 580
            ++G Q    NL
Sbjct: 743 PEMGNQNGGPNL 754



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 234/508 (46%), Gaps = 16/508 (3%)

Query: 169 RGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTV 228
           R + +K I C  + V      +  G + S +I    R+G +  A  I+E  + EG+    
Sbjct: 453 RFKTAKEIVCRIYRVGL----SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDH 508

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           + F+ L+++  ++G   EA      M    + PN V+++ +I+  G  G   K    +FD
Sbjct: 509 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK-AFSVFD 567

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +M + G  P   T+ SLL    +GG    A      +       D   YNTLL A+CK  
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL-DRVSY 407
            +  A  +  EM  ++I P+  TY+++I G  + G+   A+    E +  G  L ++V Y
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 687

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
              +    K G+++  +   ++M++ G   D VT NA++ GY + GK ++   +  +M  
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
               PNL TY+ L+  YSK      +  ++R     G+  D +   +L+  +C++ ++E 
Sbjct: 748 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESANLDAMCS 585
            + +L      G+  +  T+N +I     +       D   V   LG   +    DAM S
Sbjct: 808 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 867

Query: 586 QDDKD--VQEAGRTDNQIIKVFGQLVAEKAGQ--GKKENRCR-QEILCILGVFQKMHKLK 640
             +++   QE+    +++ K   Q ++ ++ +  G     CR  +I     V ++M   K
Sbjct: 868 VLNRNHRFQESRMVLHEMSK---QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLL 668
           I P  V  SA++ A ++C   ++A++LL
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLL 952



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 186/415 (44%), Gaps = 6/415 (1%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKN--DQGKLASAMISILGRLGKVDLAKNIF 216
            YT L+  L  +G+   AI    FA + E R N      + +  +  + + G+        
Sbjct: 651  YTSLISGLCRKGKTVIAI---LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 707

Query: 217  ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
            E   N G+   +   +A+I  Y R G  ++   +   M   N  PNL TYN ++    K 
Sbjct: 708  EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767

Query: 277  GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
              D      ++  ++ NG+ PD++T +SL+       + E    +    + RG++ D +T
Sbjct: 768  K-DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT 826

Query: 337  YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
            +N L+   C   +++ AF+++  M +  IS +  T   M+    +  R  ++  +  EM 
Sbjct: 827  FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886

Query: 397  FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
              GI  +   Y  +++   ++G  + A +V +EM +  I    V  +A++    K GK D
Sbjct: 887  KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 946

Query: 457  EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
            E   +   M    + P + +++TL+ +  K G   EA+++       GLK D+V Y+ LI
Sbjct: 947  EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1006

Query: 517  DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
              LC  G +  A  L +EM  +G   N  TY ++I       T     D + +DL
Sbjct: 1007 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDL 1061



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 141/343 (41%), Gaps = 47/343 (13%)

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
           N +P+V  Y  +I  Y + G + D+L +F  M   G      + N +L    K G     
Sbjct: 120 NSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 177

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
               KEM    I  D  T+N L+     +G +++   + ++M+    +P ++TY+T++  
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y K G +K A+++    K  G+ ADV  Y+ LI  LC++  +     LL +M K  I PN
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297

Query: 544 VVTYNSIIDAFGRSA---------------------TTECTVDDVERDLGKQKESAN--- 579
            VTYN++I+ F                          T   + D     G  KE+     
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357

Query: 580 -----------------LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
                            LD +C   + D+    R     +K  G  V      G  +  C
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDL---ARGFYMRMKRNGVCVGRITYTGMIDGLC 414

Query: 623 RQEILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           +   L   + +  +M K  I P++VT+SA++N   +   F+ A
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 457


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 155/585 (26%), Positives = 263/585 (44%), Gaps = 49/585 (8%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            +  LI  Y R G  Q+++ +F  M  Y   P++ T NA++ +  K G D   V     +
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS-VWSFLKE 183

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           ML+  + PD  TFN L+ V    G +E +  L  +M   G    I TYNT+L   CK  +
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              A E++  M +K +  +V TY+ +I    ++ R+     +  +M+   I  + V+YNT
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +++ ++  G+   A  +  EM S G+  + VT+NAL+ G+  +G + E  +MF  M+A  
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           ++P+ ++Y  L+D   K   +  A   +   K+ G+    + Y+ +ID LCKNG ++ AV
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVERDLGKQKESANLDAM--- 583
            LL+EM+K+GI P++VTY+++I+ F   GR  T +  V  + R +G          +   
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR-VGLSPNGIIYSTLIYN 482

Query: 584 -----CSQDDKDVQEA----GRTDNQIIKVFGQLV-----AEKAGQGKKENRCRQ----- 624
                C ++   + EA    G T +     F  LV     A K  + ++  RC       
Sbjct: 483 CCRMGCLKEAIRIYEAMILEGHTRDHF--TFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540

Query: 625 -----------------EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
                            E L    VF +M K+   P   T+ ++L    +     +A   
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600

Query: 668 LEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWH 725
           L+ L      V  V +  L+    +     +A+SLF E+        S  Y +L   L  
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660

Query: 726 FGQKRGAQLVVLEGKRR-QVWENVWSESCLDLHLMSSGAARAMVH 769
            G+   A L   E + R  V  N    +C    +  +G  +A ++
Sbjct: 661 KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 705



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 214/467 (45%), Gaps = 35/467 (7%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GKV +A  +    L+ G       F+ALI  +   G  +EA+ +F  M+   L P+ V+Y
Sbjct: 312 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 371

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
             ++D   K   +F      +  M RNGV   RIT+  ++    + G  + A  L NEM 
Sbjct: 372 GVLLDGLCKNA-EFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             GID DI TY+ L++  CK  +   A EI+  +    +SPN + YST+I    + G L 
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A+ ++  M   G   D  ++N +++   K G+  EA    + M S GI  + V+++ L+
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GYG  G+  +   +F++M      P   TY +L+    KGG  +EA +  +        
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 610

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            D V+Y+ L+ A+CK+G +  AVSL  EM +  I P+  TY S+I    R   T   +  
Sbjct: 611 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-- 668

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
                 K+ E+                     N+++         KAGQ K         
Sbjct: 669 ---LFAKEAEA---------------RGNVLPNKVMYTCFVDGMFKAGQWKA-------- 702

Query: 627 LCILGVF--QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               G++  ++M  L   P++VT +A+++  SR    E  + LL E+
Sbjct: 703 ----GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 184/361 (50%), Gaps = 3/361 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I++L   G  + +  + +     GY  T+  ++ ++  Y + G  + AI + + MK   
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258

Query: 259 LKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           +  ++ TYN +I D C    +   ++  +  DM +  + P+ +T+N+L+   S  G    
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYL--LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 316

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  L NEM+  G+  +  T+N L+D          A ++   M AK ++P+ V+Y  ++D
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 376

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K    D A   +  MK  G+ + R++Y  ++    K G  +EA+++  EM   GI  
Sbjct: 377 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 436

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D VTY+AL+ G+ K G++   + +  ++    +SPN + YSTLI    + G  KEA++I+
Sbjct: 437 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 496

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
                 G   D   ++ L+ +LCK G V  A   +  MT +GI PN V+++ +I+ +G S
Sbjct: 497 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 556

Query: 558 A 558
            
Sbjct: 557 G 557



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 187/379 (49%), Gaps = 3/379 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L +  + DLA+  +      G       ++ +I    ++G+  EA+ + N M +  + P+
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           +VTY+A+I+   K G  FK   EI   + R G+ P+ I +++L+  C R G  + A  ++
Sbjct: 438 IVTYSALINGFCKVG-RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 496

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
             M+  G  +D FT+N L+ ++CK  ++  A E M  M +  I PN V++  +I+GY  +
Sbjct: 497 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 556

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G    A ++F EM  +G      +Y ++L    K G   EA    K + +     D V Y
Sbjct: 557 GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 616

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           N LL    K G   +   +F +M    + P+  TY++LI    + G    A+   +E + 
Sbjct: 617 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 503 AG-LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            G +  + V+Y+  +D + K G  ++ +   ++M   G  P++VT N++ID + R    E
Sbjct: 677 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736

Query: 562 CTVDDVERDLGKQKESANL 580
            T +D+  ++G Q    NL
Sbjct: 737 KT-NDLLPEMGNQNGGPNL 754



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 234/508 (46%), Gaps = 16/508 (3%)

Query: 169 RGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTV 228
           R + +K I C  + V      +  G + S +I    R+G +  A  I+E  + EG+    
Sbjct: 453 RFKTAKEIVCRIYRVGL----SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDH 508

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           + F+ L+++  ++G   EA      M    + PN V+++ +I+  G  G   K    +FD
Sbjct: 509 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK-AFSVFD 567

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +M + G  P   T+ SLL    +GG    A      +       D   YNTLL A+CK  
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL-DRVSY 407
            +  A  +  EM  ++I P+  TY+++I G  + G+   A+    E +  G  L ++V Y
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 687

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
              +    K G+++  +   ++M++ G   D VT NA++ GY + GK ++   +  +M  
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
               PNL TY+ L+  YSK      +  ++R     G+  D +   +L+  +C++ ++E 
Sbjct: 748 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESANLDAMCS 585
            + +L      G+  +  T+N +I     +       D   V   LG   +    DAM S
Sbjct: 808 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 867

Query: 586 QDDKD--VQEAGRTDNQIIKVFGQLVAEKAGQ--GKKENRCR-QEILCILGVFQKMHKLK 640
             +++   QE+    +++ K   Q ++ ++ +  G     CR  +I     V ++M   K
Sbjct: 868 VLNRNHRFQESRMVLHEMSK---QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLL 668
           I P  V  SA++ A ++C   ++A++LL
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLL 952



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 207/472 (43%), Gaps = 30/472 (6%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKN--DQGKLASAMISILGRLGKVDLAKNIF 216
            YT L+  L  +G   K +    FA + E R N      + +  +  + + G+        
Sbjct: 651  YTSLISGLCRKG---KTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 707

Query: 217  ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
            E   N G+   +   +A+I  Y R G  ++   +   M   N  PNL TYN ++    K 
Sbjct: 708  EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767

Query: 277  GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
              D      ++  ++ NG+ PD++T +SL+       + E    +    + RG++ D +T
Sbjct: 768  K-DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT 826

Query: 337  YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
            +N L+   C   +++ AF+++  M +  IS +  T   M+    +  R  ++  +  EM 
Sbjct: 827  FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886

Query: 397  FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
              GI  +   Y  +++   ++G  + A +V +EM +  I    V  +A++    K GK D
Sbjct: 887  KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 946

Query: 457  EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
            E   +   M    + P + +++TL+ +  K G   EA+++       GLK D+V Y+ LI
Sbjct: 947  EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1006

Query: 517  DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII------------------DAFGRSA 558
              LC  G +  A  L +EM  +G   N  TY ++I                  D   R  
Sbjct: 1007 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1066

Query: 559  TTECTV-DDVERDLG----KQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
             T  ++  D  R+L     K K   N  A+C +++ D+Q    + NQ +K+F
Sbjct: 1067 ITSMSLSQDSHRNLKMAMEKLKALQNDIAVCHREELDLQSNVLSKNQ-LKLF 1117



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 2/191 (1%)

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
           N +P+V  Y  +I  Y + G + D+L +F  M   G      + N +L    K G     
Sbjct: 120 NSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 177

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
               KEM    I  D  T+N L+     +G +++   + ++M+    +P ++TY+T++  
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y K G +K A+++    K  G+ ADV  Y+ LI  LC++  +     LL +M K  I PN
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297

Query: 544 VVTYNSIIDAF 554
            VTYN++I+ F
Sbjct: 298 EVTYNTLINGF 308


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 252/534 (47%), Gaps = 42/534 (7%)

Query: 207 GKVDLAKNIFETALNEGYGN--TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           G+   A +I   A+ +G G    V  +S ++    + G   EA  +F+ M +  + PN+V
Sbjct: 188 GRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVV 247

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           TYN+VI A C    VD      I   M+ NGVQPD +T+N+L+   S  G W+ A  +F 
Sbjct: 248 TYNSVIHALCKARAVDKAQ--GILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFK 305

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EM  RG+  +  T +T +  +CK  +++ A E    M AK    N+++YST++ GYA AG
Sbjct: 306 EMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAG 365

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            L D  N+F+ M   GI  ++  +N +++ YAK G   EA+ + ++M+  G+  D +TY 
Sbjct: 366 CLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYL 425

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           A++  + + G  D+    F  M    V PN   Y  LI  +   G   +A ++  E +  
Sbjct: 426 AVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNK 485

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           GL   ++ +++LI+ LCK G V  A  + D + + G + +V  + S+ID +       C 
Sbjct: 486 GLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGY-------CL 538

Query: 564 VDDVERDLGKQKESANL-DAMCSQD-DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
           +       GK  E+  + DAM S   + D           I  +G LV      G+ ++ 
Sbjct: 539 I-------GKMSEAFRVHDAMVSVGIEPD-----------IVTYGTLVNGCCKNGRIDDG 580

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV 681
                   L +F+++    +KP   T+  IL+          A  + +E+      V   
Sbjct: 581 --------LILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIP 632

Query: 682 AHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
            + +L+    R+N   +A+++F ++  M+        N +   ++   ++  A+
Sbjct: 633 TYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAE 686



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 239/497 (48%), Gaps = 38/497 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISV-FNSMK 255
           S +I    R  ++DLA   F   L +G    V   S+L+     +    EA+ V F+ M 
Sbjct: 107 SILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMP 166

Query: 256 RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLR------NGVQPDRITFNSLLAV 308
                P+ ++Y+ V+ + C  G   +        D+LR       G   + + +++++  
Sbjct: 167 ELGCVPDAISYSTVLKSVCDDGRSQWAL------DILRMAVKQGGGCPCNVVVYSTVVHG 220

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
             + G    A +LF+EM  +G+  ++ TYN+++ A+CK   +D A  I+ +M    + P+
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
            VTY+T+I GY+  G+   A+ MF EM   G+  + V+ +T ++   K GR EEA     
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            M + G + + ++Y+ LL GY   G   ++  +F  M  D + PN   ++ L++ Y+K G
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
           + +EAM IF + ++ GL  DV+ Y A+I A C+ G ++ A+   + M  +G+ PN   Y 
Sbjct: 401 MVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQ 460

Query: 549 SIIDAF---GRSATTECTVDDVE-RDLGKQKES--ANLDAMCSQDDKDVQEAGRTDNQII 602
            +I  F   G     E  V ++  + LG    S  + ++ +C +    V EA R  + II
Sbjct: 461 CLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEG--RVFEAQRIFDMII 518

Query: 603 K--------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
           +        +F  L+      GK     R        V   M  + I+P++VT+  ++N 
Sbjct: 519 RTGEKADVNIFTSLIDGYCLIGKMSEAFR--------VHDAMVSVGIEPDIVTYGTLVNG 570

Query: 655 CSRCNSFEDASMLLEEL 671
           C +    +D  +L  EL
Sbjct: 571 CCKNGRIDDGLILFREL 587



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 197/393 (50%), Gaps = 3/393 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+      G+W +A++ F     R    N      S  ++ L + G+++ A+  F++
Sbjct: 284 YNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTV--TCSTFVAFLCKHGRIEEAREFFDS 341

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L +G+   + ++S L+  Y  +G   +  ++FN M R  + PN   +N +++   K G+
Sbjct: 342 MLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGM 401

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +  + IF+DM + G+ PD +T+ +++    R G  + A + FN M+ +G++ +   Y 
Sbjct: 402 -VREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQ 460

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+   C    +  A E++ E+  K + P +++++++I+   K GR+ +A  +F  +   
Sbjct: 461 CLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRT 520

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   D   + +++  Y  +G+  EA  V   M S GI  D VTY  L+ G  K G+ D+ 
Sbjct: 521 GEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDG 580

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +F ++    V P   TY  ++D     G    A ++F+E  ++G+   +  YS L+  
Sbjct: 581 LILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTG 640

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           LC+N   E A+++  ++    ++ ++V  N +I
Sbjct: 641 LCRNNCTEEAITVFQKLCAMNVKFDIVILNIMI 673



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 192/428 (44%), Gaps = 80/428 (18%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA-------ARNLFNEMVH----RGIDQDI 334
           +FD +LR   Q      N  L+  +R     A       A  LFN M      R     +
Sbjct: 44  LFDGLLRQTAQVPESVLNGFLSALARAPASAALRDGPALAVALFNRMSTGTGPRVALPTV 103

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN-MFS 393
           +TY+ L+D  C+  ++DLAF     +  + +  +V+  S+++ G   A R D+A++ +F 
Sbjct: 104 YTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFH 163

Query: 394 EMKFLGIGLDRVSYNTVLS------------------------------IYA-------K 416
            M  LG   D +SY+TVL                               +Y+       K
Sbjct: 164 RMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFK 223

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
            G+  EA  +  EM   G+  + VTYN+++    K    D+ + +  QM  + V P+ +T
Sbjct: 224 EGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVT 283

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y+TLI  YS  G +K+A+++F+E    G+  + V  S  +  LCK+G +E A    D M 
Sbjct: 284 YNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSML 343

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
            +G + N+++Y++++  +   AT  C VD            +NL  +  +D       G 
Sbjct: 344 AKGHKLNIISYSTLLHGY---ATAGCLVD-----------MSNLFNLMVRD-------GI 382

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
             NQ   VF  LV   A  G      R+ +     +F+ M K  + P+V+T+ A+++A  
Sbjct: 383 VPNQ--HVFNILVNGYAKCGM----VREAMF----IFEDMQKRGLNPDVLTYLAVIHAFC 432

Query: 657 RCNSFEDA 664
           R  S +DA
Sbjct: 433 RMGSMDDA 440



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 177/384 (46%), Gaps = 17/384 (4%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+I    R+G +D A + F   +++G       +  LI  +   G   +A  +   ++  
Sbjct: 426 AVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNK 485

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
            L P ++++ ++I+   K G  F+    IFD ++R G + D   F SL+   C  G + E
Sbjct: 486 GLGPCILSFASLINHLCKEGRVFE-AQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSE 544

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           A R + + MV  GI+ DI TY TL++  CK  ++D    +  E+  K + P   TY  ++
Sbjct: 545 AFR-VHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIIL 603

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG   AGR   A  MF EM   GI +   +Y+ +L+   +    EEA+ V +++ +  ++
Sbjct: 604 DGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVK 663

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D V  N ++    K  + +E   +F  +    + P + TY+ +++   K G  +EA  +
Sbjct: 664 FDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGV 723

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F    ++GL       + ++  L + G          E+ K GI    V   SI+     
Sbjct: 724 FSVMLKSGLSPTSHFINVIVRTLLEKG----------EIVKAGIYMCRVDGKSIL----F 769

Query: 557 SATTECTVDDVERDLGKQKESANL 580
            A+T   +  +    GK +E  NL
Sbjct: 770 EASTASMLLSLFSCKGKHREHLNL 793



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 145/301 (48%), Gaps = 1/301 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I+ L + G+V  A+ IF+  +  G    V  F++LI  Y   G   EA  V ++M  
Sbjct: 495 ASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVS 554

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P++VTY  +++ C K G     ++ +F ++L  GV+P   T+  +L      G   
Sbjct: 555 VGIEPDIVTYGTLVNGCCKNGRIDDGLI-LFRELLHKGVKPTTFTYGIILDGLFHAGRTA 613

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AA+ +F EM+  GI   I TY+ LL  +C+    + A  +  ++ A N+  ++V  + MI
Sbjct: 614 AAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMI 673

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
               KA R ++A  +F+ +   G+     +Y  ++    K G  EEA  V   M  SG+ 
Sbjct: 674 SKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLS 733

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             +   N ++    ++G+  +      ++    +     T S L+ ++S  G ++E + +
Sbjct: 734 PTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNL 793

Query: 497 F 497
            
Sbjct: 794 L 794


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 177/337 (52%), Gaps = 1/337 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A  +F+  +  GY   V+++S +I    R G   E I +   MK    +P++V Y
Sbjct: 175 GKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIY 234

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N ++D   K  +     V IF  M   G+ P  +T+ SL+      G W+ A  L NEM 
Sbjct: 235 NTIVDRLCKDRL-VNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMK 293

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
              I  D+  ++ L+D +CK  ++  A  I+  M    + P+V TY+T+++GY     + 
Sbjct: 294 GGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVV 353

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A  +F  M   G   D  S++ +++ Y K  R +EA  +  EM   G+  D V+YN L+
Sbjct: 354 EARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLI 413

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G  +  +  E   +F+ M ++   PNL+TYS L+D  SK G   +AM +FR  + +GLK
Sbjct: 414 SGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLK 473

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            D+V Y+ +ID +CK G  + A  L  E++ +G++PN
Sbjct: 474 PDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPN 510



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 186/367 (50%), Gaps = 7/367 (1%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G+L SA++ +      V L+K + E A   G  + V + + LI+ + R  +     SV  
Sbjct: 95  GELFSALVRMKHYKTVVSLSKQM-EMA---GISHDVLSLTILINCFCRLCHVDYGFSVLG 150

Query: 253 SMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
            + +  L+PN++T++ +I+  C +G +     +E+FD M+  G +P+  +++ ++    R
Sbjct: 151 KIIKLGLEPNVITFSTLINGFCIEGKIG--RAIELFDVMVARGYKPNVHSYSIIIKGLCR 208

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            G       L   M   G + D+  YNT++D +CK   ++ A  I  +M    I P VVT
Sbjct: 209 VGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVT 268

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+++I G    GR  +A  + +EMK   I  D V+++ ++ I  K G   EA ++ K M 
Sbjct: 269 YTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMT 328

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G+  D  TYN L+ GY  + +  E R++FE M +    P++ ++S L++ Y K     
Sbjct: 329 EMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRID 388

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA Q+F E    GL  D V Y+ LI  LC+      A  L  +M   G  PN+VTY+ ++
Sbjct: 389 EAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILL 448

Query: 552 DAFGRSA 558
           D   +  
Sbjct: 449 DCLSKQG 455



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 193/384 (50%), Gaps = 3/384 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           ++ L+      G+  +AI+ F   V R  + N      S +I  L R+GK      + E 
Sbjct: 164 FSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHS--YSIIIKGLCRVGKTTEVIKLLEH 221

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G    V  ++ ++    +     EA+ +F  MK   + P +VTY ++I      G 
Sbjct: 222 MKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLG- 280

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            +K    + ++M    + PD + F+ L+ +  + G    AR +   M   G++ D+ TYN
Sbjct: 281 RWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYN 340

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL++  C   ++  A ++   M +K   P+V ++S +++GY KA R+D+A  +F EM   
Sbjct: 341 TLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHR 400

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D VSYNT++S   +  R  EA  + K+M S+G   + VTY+ LL    KQG  D+ 
Sbjct: 401 GLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQA 460

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +F  M+   + P+L+TY+ +ID   K G +K+A ++F E    GL+ +  + +  ID 
Sbjct: 461 MGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDG 520

Query: 519 LCKNGLVESAVSLLDEMTKEGIRP 542
           +CK GL++ A     +M K+   P
Sbjct: 521 VCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 194/426 (45%), Gaps = 43/426 (10%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F+ M+     P  + F  L +   R   ++   +L  +M   GI  D+ +   L++  C+
Sbjct: 79  FNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCR 138

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +D  F ++ ++    + PNV+T+ST+I+G+   G++  A+ +F  M   G   +  S
Sbjct: 139 LCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHS 198

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y+ ++    ++G+  E + + + M+  G   D V YN ++    K    +E   +F +MK
Sbjct: 199 YSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMK 258

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + P ++TY++LI      G +KEA  +  E K   +  D+V +S LID +CK G V 
Sbjct: 259 GTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVS 318

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFG-RSATTEC-TVDDVERDLGKQKE----SANL 580
            A  +L  MT+ G+ P+V TYN++++ +  R    E   V +V    G+  +    S  +
Sbjct: 319 EARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILV 378

Query: 581 DAMCSQDDKDVQEAGR---------------TDNQIIKVFGQ---------LVAEKAGQG 616
           +  C    K + EA +               + N +I    Q         L  +    G
Sbjct: 379 NGYCKA--KRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNG 436

Query: 617 KKENRCRQEIL--CI---------LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
              N     IL  C+         +G+F+ M    +KP++VT++ +++   +   F+DA 
Sbjct: 437 YPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDAR 496

Query: 666 MLLEEL 671
            L  EL
Sbjct: 497 ELFAEL 502



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 148/333 (44%), Gaps = 24/333 (7%)

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A      M   N  P++V +  +     +       +++  +M+  GI  D +S   +++
Sbjct: 75  ALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILIN 134

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
            + +L   +    V  ++   G+  + +T++ L+ G+  +GK      +F+ M A    P
Sbjct: 135 CFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKP 194

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           N+ +YS +I    + G   E +++    K  G + DVV+Y+ ++D LCK+ LV  AV + 
Sbjct: 195 NVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIF 254

Query: 533 DEMTKEGIRPNVVTYNSII----------DAFGRSATTECTVDDVERDLGKQKESANLDA 582
            +M   GI P VVTY S+I          +AFG     E    ++  DL     S  +D 
Sbjct: 255 CKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFG--LLNEMKGGNIMPDL--VAFSVLIDI 310

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAE---KAGQGKKENRC-RQEILCILGVFQKMHK 638
           MC + +  V EA      I+K   ++  E             C R E++    VF+ M  
Sbjct: 311 MCKEGE--VSEA----RVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMIS 364

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               P+V +FS ++N   +    ++A  L +E+
Sbjct: 365 KGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEM 397



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/253 (20%), Positives = 105/253 (41%), Gaps = 35/253 (13%)

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           +AL     M ++      V +  L     +   Y  V  + +QM+   +S ++L+ + LI
Sbjct: 74  DALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILI 133

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           + + +         +  +  + GL+ +V+ +S LI+  C  G +  A+ L D M   G +
Sbjct: 134 NCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYK 193

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           PNV +Y+ II    R   T   +  +E  + +G + +    + +  +  KD         
Sbjct: 194 PNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKD--------- 244

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
                  +LV E                  + +F KM    I P VVT++++++      
Sbjct: 245 -------RLVNEA-----------------VHIFCKMKGTGILPTVVTYTSLIHGLRNLG 280

Query: 660 SFEDASMLLEELR 672
            +++A  LL E++
Sbjct: 281 RWKEAFGLLNEMK 293


>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 530

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 194/356 (54%), Gaps = 5/356 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI + G+L   DLA ++ +   + G   TV  FS L+  Y R+G   EA+  FN M+ Y 
Sbjct: 149 MIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYG 208

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            KP+ V+++ VI + C K         E+F D L++  +PD I + SL+    R G    
Sbjct: 209 CKPDKVSFSIVISSLCKKRRAS---EAELFFDSLKHKFEPDVIVYTSLVHGWCRAGDIAK 265

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +F++M   G+  +++TY+ ++D++C+  Q+  A ++ +EM      PN VT+++++ 
Sbjct: 266 AEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMR 325

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            + KAGR +  L ++++MK LG   D +SYN ++  + K    +EA+ V   M   G+  
Sbjct: 326 VHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAP 385

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +A T+N++ G   +    +   RM+ +MK     PN LTY+ L+ +++        +++ 
Sbjct: 386 NASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLK 445

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG-IRPNVVTYNSIID 552
           +E  ++ ++ +V  Y  LI   C+ G   +A +L+ EM +E  ++PN+  Y ++++
Sbjct: 446 KEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLE 501



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 182/350 (52%), Gaps = 9/350 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           ++ L+R     G  ++A+  F    + E+      K++ S +IS L +  +   A+  F+
Sbjct: 181 FSVLVRRYVRAGLAAEAVHAFN---RMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFD 237

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKG 276
           + L   +   V  +++L+  + R+G   +A  VF+ MK   +KPN+ TY+ VID+ C  G
Sbjct: 238 S-LKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCG 296

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
            +   H  ++F +M+  G  P+ +TFNSL+ V  + G  E    ++N+M   G   D  +
Sbjct: 297 QITRAH--DVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTIS 354

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN L+++ CK   +D A +++  M  K ++PN  T++++    A+   ++ A  M+++MK
Sbjct: 355 YNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMK 414

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
            L    + ++YN ++ ++A     +  L + KEM+ S +  +  TY  L+  + ++G ++
Sbjct: 415 ELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWN 474

Query: 457 EVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
               + ++M +  C+ PNL  Y T++++    G  K+  ++  +    G 
Sbjct: 475 NAYNLMKEMVEEKCLKPNLSIYETVLELLRNAGQLKKHEELVEKMVARGF 524



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 126/295 (42%), Gaps = 71/295 (24%)

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN ++D   K    DLA+ ++  M ++ +   V T+S ++  Y +AG   +A++ F+ M+
Sbjct: 146 YNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRME 205

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G   D+VS++ V+S   K  R  EA L    ++      D + Y +L+ G+ + G   
Sbjct: 206 DYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHK-FEPDVIVYTSLVHGWCRAGDIA 264

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLID---------------------------------- 482
           +   +F  MK   V PN+ TYS +ID                                  
Sbjct: 265 KAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLM 324

Query: 483 -VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI- 540
            V+ K G  ++ +Q++ + K+ G  AD + Y+ LI++ CK+  ++ AV +LD M K+G+ 
Sbjct: 325 RVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVA 384

Query: 541 ----------------------------------RPNVVTYNSIIDAFGRSATTE 561
                                              PN +TYN ++  F  S + +
Sbjct: 385 PNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSID 439



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 143/325 (44%), Gaps = 50/325 (15%)

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+ MID   K    D A ++   MK  G+ +   +++ ++  Y + G   EA+     ME
Sbjct: 146 YNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRME 205

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G + D V+++ ++    K+ +  E    F+ +K     P+++ Y++L+  + + G   
Sbjct: 206 DYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHK-FEPDVIVYTSLVHGWCRAGDIA 264

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +A ++F + K+AG+K +V  YS +ID+LC+ G +  A  +  EM   G  PN VT+NS++
Sbjct: 265 KAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLM 324

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
               +                                     AGRT+ ++++V+ Q+  +
Sbjct: 325 RVHVK-------------------------------------AGRTE-KVLQVYNQM--K 344

Query: 612 KAGQGKK--------ENRCRQEILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
           + G            E+ C+ E L   + V   M K  + PN  TF++I    +  +   
Sbjct: 345 RLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVN 404

Query: 663 DASMLLEELRLFDNQVYGVAHGLLM 687
            A  +  +++        + + +LM
Sbjct: 405 GAHRMYAKMKELKCMPNTLTYNILM 429



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/315 (20%), Positives = 127/315 (40%), Gaps = 34/315 (10%)

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN ++   GK   +D    + + MK+  V   + T+S L+  Y + GL  EA+  F   +
Sbjct: 146 YNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRME 205

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G K D V +S +I +LCK      A    D + K    P+V+ Y S++  + R+    
Sbjct: 206 DYGCKPDKVSFSIVISSLCKKRRASEAELFFDSL-KHKFEPDVIVYTSLVHGWCRAG--- 261

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
                   D+ K +E  +          D++EAG   N  +  +  ++           R
Sbjct: 262 --------DIAKAEEVFS----------DMKEAGVKPN--VYTYSIVIDSLC-------R 294

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV 681
           C Q I     VF +M      PN VTF++++    +    E    +  +++        +
Sbjct: 295 CGQ-ITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTI 353

Query: 682 AHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEG 739
           ++  L+    +D    +A+ + D +     +  ++ +N++   +       GA  +  + 
Sbjct: 354 SYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKM 413

Query: 740 KRRQVWENVWSESCL 754
           K  +   N  + + L
Sbjct: 414 KELKCMPNTLTYNIL 428


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 218/434 (50%), Gaps = 13/434 (2%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           ++++ +I+   R+G   +A+ VF+ M    + PN +TYN +ID   KGG D +    + D
Sbjct: 197 FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGG-DLEAGFSLRD 255

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M+ +G++P+ IT+N LL+   R G       L +EM  + +  D FTY+ L D + +  
Sbjct: 256 QMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNG 315

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
                  +  +     ++    T S +++G  K G++  A  +   +   G+   RV YN
Sbjct: 316 DSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYN 375

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+++ Y + G  E A     +M+S  I+ D +TYNAL+ G  K  +    + +  +M+ +
Sbjct: 376 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 435

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V+P + T++TLID Y + G  ++   +  E ++ GLK +VV Y ++++A CKNG +  A
Sbjct: 436 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 495

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER----DLGKQKESANL--DA 582
           V++LD+M  + + PN   YN+IIDA+      +     VE+     +     + NL    
Sbjct: 496 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 555

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC--RQEILCILGVFQKMHKLK 640
           +C+Q    + EA    N +     +L+ +        + C  R  I   L + Q+MHK  
Sbjct: 556 LCNQ--SQISEAEEIINSLSN--HRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 611

Query: 641 IKPNVVTFSAILNA 654
           IK  V T+  +++ 
Sbjct: 612 IKSTVRTYHQLISG 625



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 174/360 (48%), Gaps = 36/360 (10%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           ++ L+S   R+G   E  ++ + M    + P+  TY+ + D   + G D K ++ +F   
Sbjct: 269 YNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNG-DSKAMLSLFGKS 327

Query: 291 LRNGVQ-----------------------------------PDRITFNSLLAVCSRGGLW 315
           L+NGV                                    P R+ +N+L+    + G  
Sbjct: 328 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 387

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A + F +M  R I  D  TYN L++ +CK  ++  A +++ EM    ++P V T++T+
Sbjct: 388 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 447

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID Y + G+L+    + SEM+  G+  + VSY ++++ + K G+  EA+ +  +M    +
Sbjct: 448 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 507

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +A  YNA++  Y + G  D+   + E+MK++ +SP+++TY+ LI          EA +
Sbjct: 508 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 567

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I        L  D V Y+ LI A C  G ++ A+ L   M K GI+  V TY+ +I   G
Sbjct: 568 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLG 627



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 191/428 (44%), Gaps = 43/428 (10%)

Query: 251 FNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP-DRITFNSLLAVC 309
           F  +     +P+   +N  + AC   G D    V +   M R+G  P +  ++N ++A  
Sbjct: 148 FGILASAGARPDTFAWNKAVQACVAAG-DLGEAVGMLRRMGRDGAPPPNAFSYNVVIA-- 204

Query: 310 SRGGLWEAARN-----LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
              G+W A R      +F+EM  R +  +  TYNT++D   KG  ++  F +  +M    
Sbjct: 205 ---GMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHG 261

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           + PN +TY+ ++ G  +AGR+ +   +  EM    +  D  +Y+ +    ++ G  +  L
Sbjct: 262 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 321

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +  +   +G+     T + LL G  K GK      + + +    + P  + Y+TLI+ Y
Sbjct: 322 SLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 381

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            + G  + A   F + K   +K D + Y+ALI+ LCK   + +A  LL EM   G+ P V
Sbjct: 382 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 441

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
            T+N++IDA+GR+   E                      C     ++QE G   N  +  
Sbjct: 442 ETFNTLIDAYGRTGQLE---------------------KCFIVLSEMQENGLKPN--VVS 478

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           +G +V      GK        I   + +   M    + PN   ++AI++A       + A
Sbjct: 479 YGSIVNAFCKNGK--------IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQA 530

Query: 665 SMLLEELR 672
            +L+E+++
Sbjct: 531 FILVEKMK 538



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 181/380 (47%), Gaps = 3/380 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L   L   G+    +  F  ++K      D     S +++ L + GKV +A+ + ++
Sbjct: 304 YSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDY--TCSILLNGLCKDGKVSIAEEVLQS 361

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +N G   T   ++ LI+ Y ++G  + A S F  MK  ++KP+ +TYNA+I+   K   
Sbjct: 362 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA-E 420

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
              +  ++  +M  NGV P   TFN+L+    R G  E    + +EM   G+  ++ +Y 
Sbjct: 421 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG 480

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           ++++A CK  ++  A  I+ +M  K++ PN   Y+ +ID Y + G  D A  +  +MK  
Sbjct: 481 SIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 540

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI    V+YN ++       +  EA  +   + +  +  DAV+YN L+     +G  D+ 
Sbjct: 541 GISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKA 600

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + ++M    +   + TY  LI      G   E   ++++  Q  +     +++ +++A
Sbjct: 601 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEA 660

Query: 519 LCKNGLVESAVSLLDEMTKE 538
             K G    A  L  EM ++
Sbjct: 661 YSKYGNEIKAEDLRKEMLQK 680


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 147/537 (27%), Positives = 242/537 (45%), Gaps = 81/537 (15%)

Query: 202 ILGRLGKVDLAKNIFE-TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           +L  LGK+     +F+     +GY ++V+ ++  + A  ++   Q A   F  M+R    
Sbjct: 11  VLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYP 70

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           P+  TY+ V+    K G +     E+   +  +GV+ + IT++ ++  C +    + A  
Sbjct: 71  PDDFTYSIVLRGLCKAG-ELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALE 129

Query: 321 LFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           +F  M   G    D+ T+N+LL  +C G +M  AF +   M      PNV++YST++DG 
Sbjct: 130 IFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGL 189

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            KAGRLD+A  ++ EM       D V+Y + ++   K  R  EA   C++M + G + DA
Sbjct: 190 CKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADA 249

Query: 440 VTYNALLGGYGKQGK-----------------YDEVRRMFEQM----------------K 466
           V ++ ++G   K+G                   DE  + FE+M                 
Sbjct: 250 VAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIH 309

Query: 467 ADCVS----------------------PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           A C S                      PNL TY+ ++D   K     EA ++  E    G
Sbjct: 310 AVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYG 369

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           L  DVV YSAL+D LCK G ++ A  LL+EM+KEG+ P+  T  SI++A  ++   +  +
Sbjct: 370 LSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYAL 429

Query: 565 DDVE--RDLGKQKESAN----LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
             +E  +  G   +       LD +C        +AGR D + I    ++VA K      
Sbjct: 430 SHLETMKARGSTPDLVTYNTLLDGLC--------KAGRID-EAITFLAKMVAAKCTPDVF 480

Query: 619 ENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
                   LC  G       +FQ+M K  + P+ V + ++L+  +R N  ED ++ L
Sbjct: 481 SYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLAR-NGLEDLALEL 536



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 210/476 (44%), Gaps = 63/476 (13%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           DD+T+  +LR L   GE  KA +       RE          S +I    +  +VD A  
Sbjct: 72  DDFTYSIVLRGLCKAGELDKAKE--LLGQLRESGVKLNVITYSVVIDGCCKASRVDDALE 129

Query: 215 IFETALNEGYGNT--VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
           IF+T ++ G G    V  F++L+          EA  +F  M +   +PN+++Y+ ++D 
Sbjct: 130 IFKT-MSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDG 188

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA------------------------- 307
             K G        ++++M+     PD + + S +                          
Sbjct: 189 LCKAG-RLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKA 247

Query: 308 -----------VCSRG----------------GLWEAARNLFNEMVHRGIDQDIFTYNTL 340
                      +C +G                G+ + A   F EM+ R        +NTL
Sbjct: 248 DAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTL 307

Query: 341 LDAICKGAQMD---LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           + A+CK  ++    L F+ M  M      PN+ TY+ M+D   KA +LD+A  + +EM  
Sbjct: 308 IHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMAN 367

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  D V+Y+ ++    KLG+ + A  + +EM   G+  D+ T  ++L    K GK D 
Sbjct: 368 YGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDY 427

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
                E MKA   +P+L+TY+TL+D   K G   EA+    +   A    DV  Y+ +I 
Sbjct: 428 ALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIIT 487

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           ALC++G    A ++  EM K G+ P+ V Y+S++D   R+   +  ++ ++  L K
Sbjct: 488 ALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK 543



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 205/438 (46%), Gaps = 28/438 (6%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDL 211
           C  D  TF  LL+ L +    S+A   F +  K     N      S ++  L + G++D 
Sbjct: 140 CVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISY--STLLDGLCKAGRLDE 197

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  ++E  + +     + A+++ ++   ++    EA      M     K + V ++ VI 
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257

Query: 272 A-CGKGGVD---------------FKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
             C KG  +                    + F++M+     P    FN+L+ AVC    L
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRL 317

Query: 315 WEAARNLFNEMVHRG---IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            +    LF  M          ++ TYN ++D +CK  Q+D A E++ EM    +SP+VVT
Sbjct: 318 PDGVL-LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVT 376

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           YS ++DG  K G+LD A ++  EM   G+  D  +  ++L+  +K G+ + AL   + M+
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMK 436

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           + G   D VTYN LL G  K G+ DE      +M A   +P++ +Y+ +I    + G   
Sbjct: 437 ARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAA 496

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            A  IF+E  + G+  D VLY +L+D L +NGL + A+ LL        +P+ V +  ++
Sbjct: 497 GAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVL 553

Query: 552 DAFGRSATTECTVDDVER 569
           D   ++   E   + VER
Sbjct: 554 DGLCKAGKAEDACEVVER 571



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 185/394 (46%), Gaps = 43/394 (10%)

Query: 164 RELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEG 223
           R++  +G  + A+  F+  +    +K    +  + MI  L R G +D A   FE  ++  
Sbjct: 238 RKMVTKGSKADAVA-FSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRN 296

Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFN---SMKRYNLKPNLVTYNAVIDACGKGGVDF 280
           +  +   F+ LI A  +S    + + +F    SMK +   PNL TYN ++D         
Sbjct: 297 HPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDN-------- 348

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
                                      +C    L EA + L NEM + G+  D+ TY+ L
Sbjct: 349 ---------------------------LCKAKQLDEA-QELVNEMANYGLSPDVVTYSAL 380

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +D +CK  ++D A +++ EM  + + P+  T +++++  +KAG++D AL+    MK  G 
Sbjct: 381 VDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGS 440

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D V+YNT+L    K GR +EA+    +M ++    D  +Y  ++    + G+      
Sbjct: 441 TPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHA 500

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F++M    V P+ + Y +L+D  ++ GL   A+++    K +  K D V++  ++D LC
Sbjct: 501 IFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL---KTSLCKPDFVMHKMVLDGLC 557

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           K G  E A  +++ M   G   +  TY S++   
Sbjct: 558 KAGKAEDACEVVERMADAGFPADAFTYISVVSGL 591



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 37/244 (15%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA++  L +LGK+D A ++ E    EG     +  +++++A  ++G    A+S   +MK 
Sbjct: 378 SALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKA 437

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVD------------------FKHVV------------- 284
               P+LVTYN ++D  C  G +D                  F + +             
Sbjct: 438 RGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAG 497

Query: 285 --EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
              IF +M++ GV PD + ++SLL   +R GL + A  L    + +    D   +  +LD
Sbjct: 498 AHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK---PDFVMHKMVLD 554

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            +CK  + + A E++  M       +  TY +++ G  K G++D A  +  +       +
Sbjct: 555 GLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASETHTSV 614

Query: 403 DRVS 406
           +R+S
Sbjct: 615 ERLS 618


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/553 (25%), Positives = 262/553 (47%), Gaps = 46/553 (8%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V +++ +I+ + + G   +A S ++ M    + P++VTYN++I A C    +D    +E+
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMD--KAMEV 253

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
            + M++NGV PD +T+NS+L   CS G   EA      +M   G++ D+ TY+ L+D +C
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI-GFLKKMRSDGVEPDVVTYSLLMDYLC 312

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  +   A +I   M  + + P + TY T++ GYA  G L +   +   M   GI  D  
Sbjct: 313 KNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHY 372

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            ++ ++  YA  G+ ++A+LV  +M   G+  +AVTY A++G   K G+ ++    FEQM
Sbjct: 373 VFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             + +SP  + Y++LI        ++ A ++  E    G+  + + ++++ID+ CK G V
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-LDAMC 584
             +  L + M + G++PNV+TYN++I+ +  +              GK  E+   L  M 
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLA--------------GKMDEAMKLLSGMV 538

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
           S         G   N +   +  L+       + E+         L +F++M    + P+
Sbjct: 539 S--------VGLKPNTV--TYSTLINGYCKISRMEDA--------LVLFKEMESSGVSPD 580

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELRLFDNQV----YGVA-HGLLMGYRDNIWVQALS 699
           ++T++ IL    +      A  L   +     Q+    Y +  HGL    ++ +   AL 
Sbjct: 581 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC---KNKLTDDALQ 637

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLM 759
           +F  + LMD    +  +N + D L   G+   A+ + +      +  N W+   +  +++
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII 697

Query: 760 SSGAARAMVHAWL 772
             G    +   +L
Sbjct: 698 GQGLLEELDQLFL 710



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 193/365 (52%), Gaps = 3/365 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I+ L +   +D A  +  T +  G       +++++  Y  SG  +EAI     M+ 
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             ++P++VTY+ ++D   K G       +IFD M + G++P+  T+ +LL    ++G L 
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNG-RCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E    L + MV  GI  D + ++ L+ A     ++D A  + ++M  + ++PN VTY  +
Sbjct: 354 EM-HGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAV 412

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I    K+GR++DA+  F +M   G+    + YN+++       ++E A  +  EM   GI
Sbjct: 413 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 472

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + + +N+++  + K+G+  E  ++FE M    V PN++TY+TLI+ Y   G   EAM+
Sbjct: 473 CLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +       GLK + V YS LI+  CK   +E A+ L  EM   G+ P+++TYN I+    
Sbjct: 533 LLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLF 592

Query: 556 RSATT 560
           ++  T
Sbjct: 593 QTRRT 597



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 181/342 (52%), Gaps = 3/342 (0%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD 279
           ++G    V  +S L+    ++G C EA  +F+SM +  LKP + TY  ++     KG + 
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
             H   + D M+RNG+ PD   F+ L+   +  G  + A  +F++M  +G++ +  TY  
Sbjct: 354 EMH--GLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++  +CK  +++ A     +M  + +SP  + Y+++I G     + + A  +  EM   G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I L+ + +N+++  + K GR  E+  + + M   G++ + +TYN L+ GY   GK DE  
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++   M +  + PN +TYSTLI+ Y K    ++A+ +F+E + +G+  D++ Y+ ++  L
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +     +A  L   +T+ G +  + TYN I+    ++  T+
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 633



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 139/568 (24%), Positives = 261/568 (45%), Gaps = 62/568 (10%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY---NLKPNLVTYNA 268
           A+++F+  L  G G ++Y  +  ++   R      A+S +N M R     + P+L TY  
Sbjct: 34  ARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTYGI 92

Query: 269 VIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           +I  C + G +D         ++++ G + D I F  LL  +C+     +A   +   M 
Sbjct: 93  LIGCCCRAGRLDLGFAA--LGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEI---MAEMPAKNISPNVVTYSTMIDGYAKAG 383
             G   ++F+YN LL  +C   +   A E+   MA+       P+VV+Y+T+I+G+ K G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
             D A + + EM   GI  D V+YN++++   K    ++A+ V   M  +G+  D +TYN
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           ++L GY   G+  E     ++M++D V P+++TYS L+D   K G   EA +IF    + 
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 504 GLKADVVLYS----------------ALIDALCKNGL-------------------VESA 528
           GLK ++  Y                  L+D + +NG+                   V+ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQA 390

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN------LDA 582
           + +  +M ++G+ PN VTY ++I    +S   E  +   E+ + +     N      +  
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450

Query: 583 MCSQDDKDVQEAGRTDNQIIKVF--GQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKL 639
           +C+ +  +     R +  I+++   G  +         ++ C++  ++    +F+ M ++
Sbjct: 451 LCTCNKWE-----RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQA 697
            +KPNV+T++ ++N        ++A  LL  +     +   V +  L+ GY + +    A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWH 725
           L LF E++    S     YN +   L+ 
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQ 593



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 188/359 (52%), Gaps = 3/359 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++  L + G+   A+ IF++    G    +  +  L+  Y   G   E   + + M R
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + P+   ++ +I A   +G VD    + +F  M + G+ P+ +T+ +++ +  + G  
Sbjct: 365 NGIHPDHYVFSILICAYANQGKVD--QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 422

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A   F +M+  G+      YN+L+  +C   + + A E++ EM  + I  N + ++++
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID + K GR+ ++  +F  M  +G+  + ++YNT+++ Y   G+ +EA+ +   M S G+
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + VTY+ L+ GY K  + ++   +F++M++  VSP+++TY+ ++    +      A +
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++    ++G + ++  Y+ ++  LCKN L + A+ +   +    ++    T+N +IDA 
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 211/492 (42%), Gaps = 89/492 (18%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ---DIF 335
           D +HV   FD++LR G        N  LA  +R     AA + +N M   G D+   D+ 
Sbjct: 33  DARHV---FDELLRRGRGASIYGLNRALADVARDS-PAAAVSRYNRMARAGADEVTPDLC 88

Query: 336 TYNTLLDAICKGAQMDLAFE------------------------------------IMAE 359
           TY  L+   C+  ++DL F                                     ++  
Sbjct: 89  TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDA---LNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           M      PNV +Y+ ++ G     R  +A   L+M ++ +  G   D VSY TV++ + K
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
            G  ++A     EM   GI  D VTYN+++    K    D+   +   M  + V P+ +T
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y++++  Y   G  KEA+   ++ +  G++ DVV YS L+D LCKNG    A  + D MT
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
           K G++P + TY +++  +   AT    V+              LD M       V+    
Sbjct: 329 KRGLKPEITTYGTLLQGY---ATKGALVE----------MHGLLDLM-------VRNGIH 368

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
            D+    VF  L+   A QGK +    Q +L    VF KM +  + PN VT+ A++    
Sbjct: 369 PDHY---VFSILICAYANQGKVD----QAML----VFSKMRQQGLNPNAVTYGAVIGILC 417

Query: 657 RCNSFEDASMLLEELRLFD------NQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDS 709
           +    EDA +  E+  + D      N VY  + HGL      N W +A  L  E+     
Sbjct: 418 KSGRVEDAMLYFEQ--MIDEGLSPGNIVYNSLIHGLCTC---NKWERAEELILEMLDRGI 472

Query: 710 STASAFYNALTD 721
              + F+N++ D
Sbjct: 473 CLNTIFFNSIID 484



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 193/388 (49%), Gaps = 18/388 (4%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           D Y F  L+    N+G+  +A+    F+  R++  N       A+I IL + G+V+ A  
Sbjct: 370 DHYVFSILICAYANQGKVDQAM--LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427

Query: 215 IFETALNEGY--GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
            FE  ++EG   GN VY  ++LI         + A  +   M    +  N + +N++ID+
Sbjct: 428 YFEQMIDEGLSPGNIVY--NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 485

Query: 273 CGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
             K G     V+E   +F+ M+R GV+P+ IT+N+L+      G  + A  L + MV  G
Sbjct: 486 HCKEG----RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  +  TY+TL++  CK ++M+ A  +  EM +  +SP+++TY+ ++ G  +  R   A 
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            ++  +   G  ++  +YN +L    K    ++AL + + +    ++ +A T+N ++   
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            K G+ DE + +F    ++ + PN  TY  + +     GL +E  Q+F   +  G   D 
Sbjct: 662 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDS 721

Query: 510 VLYSALIDALCKNGLVESA---VSLLDE 534
            + + ++  L + G +  A   +S++DE
Sbjct: 722 GMLNFIVRELLQRGEITRAGTYLSMIDE 749



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 2/293 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V  ++ +FE  +  G    V  ++ LI+ Y  +G   EA+ + + M    LKPN VTY
Sbjct: 490 GRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 549

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           + +I+   K     +  + +F +M  +GV PD IT+N +L    +     AA+ L+  + 
Sbjct: 550 STLINGYCKIS-RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G   ++ TYN +L  +CK    D A ++   +   ++     T++ MID   K GR D
Sbjct: 609 ESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRND 668

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A ++F      G+  +  +Y  +       G  EE   +   ME +G   D+   N ++
Sbjct: 669 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
               ++G+          +     S    T S  ID+ S GG Y+E  +   E
Sbjct: 729 RELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLS-GGKYQEYYRFLPE 780


>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
          Length = 528

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 190/371 (51%), Gaps = 2/371 (0%)

Query: 186 EERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           E R      L S +IS   R    D A  +  +A   G      A +ALIS+ G +    
Sbjct: 81  ESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVA 140

Query: 246 EAISVF-NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           EA ++F        +KP    YNA++    K G   K+  ++ D+M + GV PD  T++ 
Sbjct: 141 EAEALFLEFFLAGEIKPRTRAYNALLKGYVKIG-SLKNAEQVLDEMSQCGVAPDEATYSL 199

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L+   +R G WE+AR L  EM   G+    + ++ +L       +   AF ++ EM A  
Sbjct: 200 LVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASG 259

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           + P+   Y+ MID + K   L  A++ F  M+  GI  D V++NT++  + K GR + A+
Sbjct: 260 VRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAI 319

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +  EM  S       TYN ++   G++ +++ V  M  +MK   + PN++TY+TL+DVY
Sbjct: 320 ELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVY 379

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            + G +KEA+      K  GLK    +Y AL++A  + GL + A++++  M  +G+  + 
Sbjct: 380 GRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEAST 439

Query: 545 VTYNSIIDAFG 555
           V  NS+I+AFG
Sbjct: 440 VVLNSLINAFG 450



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 194/365 (53%), Gaps = 10/365 (2%)

Query: 197 SAMISILGRLGKVDLAKNIF-ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           +A+IS LG   +V  A+ +F E  L         A++AL+  Y + G  + A  V + M 
Sbjct: 127 TALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMS 186

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           +  + P+  TY+ ++DA  + G  ++    +  +M  +GV+P    F+ +LA     G W
Sbjct: 187 QCGVAPDEATYSLLVDAYTRAG-RWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEW 245

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAI----CKGAQMDLAFEIMAEMPAKNISPNVVT 371
           + A  +  EM   G+  D   YN ++D      C G  MD AF+ M E   + I P+VVT
Sbjct: 246 QKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMD-AFDRMRE---EGIEPDVVT 301

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           ++T+ID + K GR D A+ +F EM+     L   +YN ++++  +  R+E    +  EM+
Sbjct: 302 WNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMK 361

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G+  + +TY  L+  YG+ G++ E     E MKAD + P+   Y  L++ Y++ GL  
Sbjct: 362 EQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLAD 421

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            A+ + +  +  GL+A  V+ ++LI+A  ++  +  A S+L  M + G+RP+V+TY +++
Sbjct: 422 HALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLM 481

Query: 552 DAFGR 556
            A  R
Sbjct: 482 KALIR 486



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 173/339 (51%), Gaps = 1/339 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++G +  A+ + +     G       +S L+ AY R+G  + A  +   M+   +KP+  
Sbjct: 171 KIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSY 230

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
            ++ ++      G +++    +  +M  +GV+PDR  +N ++    +      A + F+ 
Sbjct: 231 VFSRILAGFRDRG-EWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDR 289

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   GI+ D+ T+NTL+DA CKG + D A E+  EM   N      TY+ MI+   +  R
Sbjct: 290 MREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQR 349

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
            +    M +EMK  G+  + ++Y T++ +Y + GRF+EA+   + M++ G++  +  Y+A
Sbjct: 350 WEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHA 409

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+  Y ++G  D    + + M+AD +  + +  ++LI+ + +     EA  + +  K+ G
Sbjct: 410 LVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENG 469

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           L+ DV+ Y+ L+ AL +    E    + +EM   G  P+
Sbjct: 470 LRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPD 508



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 209/461 (45%), Gaps = 71/461 (15%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           FS LISA+ R+     A+ +  S +   L P      A+I + G      + V E     
Sbjct: 91  FSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSA----RRVAE----- 141

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQ 349
                                      A  LF E    G I      YN LL    K   
Sbjct: 142 ---------------------------AEALFLEFFLAGEIKPRTRAYNALLKGYVKIGS 174

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  A +++ EM    ++P+  TYS ++D Y +AGR + A  +  EM+  G+      ++ 
Sbjct: 175 LKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSR 234

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +L+ +   G +++A  V +EM +SG+R D   YN ++  +GK          F++M+ + 
Sbjct: 235 ILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEG 294

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + P+++T++TLID + KGG +  A+++F E +++        Y+ +I+ L +    E   
Sbjct: 295 IEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVE 354

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESANLDAMCSQD 587
           ++L EM ++G+ PN++TY +++D +GRS   +  VD +E  +  G +  S    A+ +  
Sbjct: 355 AMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAY 414

Query: 588 DK--------DVQEAGRTD---------NQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
            +        +V +A R D         N +I  FG            E+R   E   +L
Sbjct: 415 AQRGLADHALNVVKAMRADGLEASTVVLNSLINAFG------------EDRRIAEAFSVL 462

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              Q M +  ++P+V+T++ ++ A  R   FE   ++ EE+
Sbjct: 463 ---QFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEM 500



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 168/323 (52%), Gaps = 5/323 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++    R G+ + A+ + +    +G   + Y FS +++ +   G  Q+A +V   M  
Sbjct: 198 SLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHA 257

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P+   YN +ID  GK      H ++ FD M   G++PD +T+N+L+    +GG  +
Sbjct: 258 SGVRPDRHFYNVMIDTFGKYNC-LGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHD 316

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF+EM          TYN +++ + +  + +    ++AEM  + + PN++TY+T++
Sbjct: 317 RAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLV 376

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y ++GR  +A++    MK  G+      Y+ +++ YA+ G  + AL V K M + G+ 
Sbjct: 377 DVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLE 436

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              V  N+L+  +G+  +  E   + + MK + + P+++TY+TL+    +   +++   I
Sbjct: 437 ASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVI 496

Query: 497 FREFKQAGL----KADVVLYSAL 515
           + E   +G     KA  +L SAL
Sbjct: 497 YEEMITSGCAPDRKARAMLRSAL 519



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 161/345 (46%), Gaps = 34/345 (9%)

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           ++ D   ++ L+ A  +    D A E++A   A  ++P     + +I     A R+ +A 
Sbjct: 84  LEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAE 143

Query: 390 NMFSEMKFLGIGLDRV-SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            +F E    G    R  +YN +L  Y K+G  + A  V  EM   G+  D  TY+ L+  
Sbjct: 144 ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDA 203

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           Y + G+++  R + ++M+AD V P+   +S ++  +   G +++A  + RE   +G++ D
Sbjct: 204 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPD 263

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
              Y+ +ID   K   +  A+   D M +EGI P+VVT+N++IDA  +            
Sbjct: 264 RHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKG----------- 312

Query: 569 RDLGKQKESANL-DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
              G+   +  L D M    + +      T N +I + G+   E+  +G           
Sbjct: 313 ---GRHDRAIELFDEM---RESNCPLGTTTYNIMINLLGE---EQRWEG----------- 352

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            +  +  +M +  + PN++T++ +++   R   F++A   +E ++
Sbjct: 353 -VEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMK 396



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 148/355 (41%), Gaps = 77/355 (21%)

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGI--RKDAVTYNALLGGYGKQGKYDEVRRMF-E 463
           ++ ++S +A+    + AL +    ++ G+  R +AVT  AL+   G   +  E   +F E
Sbjct: 91  FSDLISAFARARLPDAALELLASAQAIGLTPRSNAVT--ALISSLGSARRVAEAEALFLE 148

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
              A  + P    Y+ L+  Y K G  K A Q+  E  Q G+  D   YS L+DA  + G
Sbjct: 149 FFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAG 208

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK-QKESANLDA 582
             ESA  LL EM  +G++P+   ++ I+  F              RD G+ QK  A L  
Sbjct: 209 RWESARILLKEMEADGVKPSSYVFSRILAGF--------------RDRGEWQKAFAVLRE 254

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI---LGVFQKMHKL 639
           M +     V+      N +I  FG           K N       C+   +  F +M + 
Sbjct: 255 MHASG---VRPDRHFYNVMIDTFG-----------KYN-------CLGHAMDAFDRMREE 293

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALS 699
            I+P+VVT++ +++A   C                             G  D    +A+ 
Sbjct: 294 GIEPDVVTWNTLIDA--HCKG---------------------------GRHD----RAIE 320

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
           LFDE++  +    +  YN + ++L    +  G + ++ E K + +  N+ + + L
Sbjct: 321 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTL 375


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 203/379 (53%), Gaps = 5/379 (1%)

Query: 183 VKREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           V R  ++  Q  L +   +++ L + G +DLA N+            V  F+ +I +  +
Sbjct: 137 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 196

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDR 299
             +  +A+++F  M+   ++PN+VTY+++I   C  G   +    ++  DM+   + P+ 
Sbjct: 197 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG--RWSDASQLLSDMIEKKINPNL 254

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           +TFN+L+    + G +  A  L ++M+ R ID DIFTYN+L++  C   ++D A ++   
Sbjct: 255 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 314

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M +K+  P++ TY+T+I G+ K+ R++D   +F EM   G+  D V+Y T++      G 
Sbjct: 315 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 374

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            + A  V K+M S G+  D +TY+ LL G    GK ++   +F+ M+   +  ++  Y+T
Sbjct: 375 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 434

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +I+   K G   +   +F      G+K +VV Y+ +I  LC   L++ A +LL +M ++G
Sbjct: 435 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 494

Query: 540 IRPNVVTYNSIIDAFGRSA 558
             P+  TYN++I A  R  
Sbjct: 495 PLPDSGTYNTLIRAHLRDG 513



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/482 (25%), Positives = 236/482 (48%), Gaps = 46/482 (9%)

Query: 199 MISILGRLGKVDLAKNI--FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++S + ++ K DL  ++      +  GY  ++   S+L++ Y       +A+++ + M  
Sbjct: 48  LLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 107

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKH-----VVEIFDDMLRNGVQPDRITFNSLL-AVCS 310
              +P+ +T+  +I         F H      V + D M++ G QP+ +T+  ++  +C 
Sbjct: 108 MGYRPDTITFTTLIHGL------FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 161

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           RG + + A NL N+M    I+ D+  +NT++D++CK   +D A  +  EM  K I PNVV
Sbjct: 162 RGDI-DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 220

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TYS++I      GR  DA  + S+M    I  + V++N ++  + K G+F EA  +  +M
Sbjct: 221 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 280

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
               I  D  TYN+L+ G+    + D+ ++MFE M +    P+L TY+TLI  + K    
Sbjct: 281 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 340

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           ++  ++FRE    GL  D V Y+ LI  L  +G  ++A  +  +M  +G+ P+++TY+ +
Sbjct: 341 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 400

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
           +D    +   E  ++  +     QK    LD                    I ++  ++ 
Sbjct: 401 LDGLCNNGKLEKALEVFDY---MQKSEIKLD--------------------IYIYTTMIE 437

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                GK ++    ++ C L +        +KPNVVT++ +++        ++A  LL++
Sbjct: 438 GMCKAGKVDD--GWDLFCSLSL------KGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 489

Query: 671 LR 672
           ++
Sbjct: 490 MK 491



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 173/339 (51%), Gaps = 1/339 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L +   VD A N+F+    +G    V  +S+LIS     G   +A  + + M  
Sbjct: 188 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 247

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PNLVT+NA+IDA  K G  F    ++ DDM++  + PD  T+NSL+         +
Sbjct: 248 KKINPNLVTFNALIDAFVKEG-KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 306

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A+ +F  MV +    D+ TYNTL+   CK  +++   E+  EM  + +  + VTY+T+I
Sbjct: 307 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 366

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G    G  D+A  +F +M   G+  D ++Y+ +L      G+ E+AL V   M+ S I+
Sbjct: 367 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 426

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D   Y  ++ G  K GK D+   +F  +    V PN++TY+T+I       L +EA  +
Sbjct: 427 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 486

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
            ++ K+ G   D   Y+ LI A  ++G   ++  L+ EM
Sbjct: 487 LKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 525



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 154/312 (49%), Gaps = 9/312 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L + G WS A Q  +  +  E++ N      +A+I    + GK   A+ + + 
Sbjct: 222 YSSLISCLCSYGRWSDASQLLSDMI--EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 279

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +       ++ +++LI+ +       +A  +F  M   +  P+L TYN +I    KG  
Sbjct: 280 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI----KGFC 335

Query: 279 DFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
             K V    E+F +M   G+  D +T+ +L+      G  + A+ +F +MV  G+  DI 
Sbjct: 336 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 395

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TY+ LLD +C   +++ A E+   M    I  ++  Y+TMI+G  KAG++DD  ++F  +
Sbjct: 396 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 455

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G+  + V+YNT++S        +EA  + K+M+  G   D+ TYN L+  + + G  
Sbjct: 456 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 515

Query: 456 DEVRRMFEQMKA 467
                +  +M++
Sbjct: 516 AASAELIREMRS 527


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 208/440 (47%), Gaps = 54/440 (12%)

Query: 163 LRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE 222
           LR L  RGE  +A++    A     R+ D G  A A+I  L   G+   A+ +       
Sbjct: 72  LRSLVRRGELDEALRLVGSA-----RRPDAGTCA-ALIKKLSASGRTAEARRVLAAC--- 122

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
             G  V A++A+++ Y  +G    A  +   M    ++P+  TYN +I   CG+G     
Sbjct: 123 --GPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRT--A 175

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           + + + D+MLR    PD +T+  LL A C R G ++ A  L +EM  +G   DI TYN +
Sbjct: 176 NALAVLDEMLRRRCVPDVVTYTILLEATCKRSG-YKQAMKLLDEMRDKGCTPDIVTYNVV 234

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           ++ IC+  ++D A E +  +P+    PN V+Y+ ++ G   A R +DA  +  EM   G 
Sbjct: 235 VNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 294

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLV-----------------------CKE-------- 429
             + V++N ++S   + G  E AL V                       CK+        
Sbjct: 295 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 354

Query: 430 ----MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
               M S G   D V+YN LL    + G+ D    +  Q+K    +P L++Y+T+ID  +
Sbjct: 355 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLT 414

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G  KEA+++  E    GL+ D++ YS +   LC+   +E A+    ++   GIRPN V
Sbjct: 415 KAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTV 474

Query: 546 TYNSIIDAFGRSATTECTVD 565
            YN+II    +   T   +D
Sbjct: 475 LYNAIILGLCKRRETHSAID 494



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 172/329 (52%), Gaps = 5/329 (1%)

Query: 228 VYAFSALISAY-GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
           V  ++ L+ A   RSGY ++A+ + + M+     P++VTYN V++  C +G VD    +E
Sbjct: 193 VVTYTILLEATCKRSGY-KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD--DAIE 249

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
              ++   G +P+ +++N +L        WE A  L  EM  +G   ++ T+N L+  +C
Sbjct: 250 FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLC 309

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           +   ++ A E++ ++P    +PN ++Y+ ++  + K  ++D A+     M   G   D V
Sbjct: 310 RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIV 369

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           SYNT+L+   + G  + A+ +  +++  G     ++YN ++ G  K GK  E   +  +M
Sbjct: 370 SYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 429

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
            +  + P+++TYST+     +    ++A++ F + +  G++ + VLY+A+I  LCK    
Sbjct: 430 VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 489

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            SA+ L   M   G  PN  TY  +I+  
Sbjct: 490 HSAIDLFAYMIGNGCMPNESTYTILIEGL 518



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 192/397 (48%), Gaps = 6/397 (1%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           D YT+  L+R L  RG  + A+      ++R  R        + ++    +      A  
Sbjct: 157 DAYTYNTLIRGLCGRGRTANALAVLDEMLRR--RCVPDVVTYTILLEATCKRSGYKQAMK 214

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           + +   ++G    +  ++ +++   + G   +AI    ++  Y  +PN V+YN V+    
Sbjct: 215 LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 274

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
                ++   E+  +M + G  P+ +TFN L++   R GL E A  +  ++   G   + 
Sbjct: 275 TAE-RWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS 333

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            +YN LL A CK  +MD A   +  M ++   P++V+Y+T++    ++G +D A+ +  +
Sbjct: 334 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 393

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           +K  G     +SYNTV+    K G+ +EAL +  EM S G++ D +TY+ +  G  ++ +
Sbjct: 394 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 453

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            ++  R F +++   + PN + Y+ +I    K      A+ +F      G   +   Y+ 
Sbjct: 454 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 513

Query: 515 LIDALCKNGLVESAVSLLDEMTKEG-IRPNVVTYNSI 550
           LI+ L   GL++ A  LLDE+   G +R +++   +I
Sbjct: 514 LIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKGAI 550



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 168/374 (44%), Gaps = 39/374 (10%)

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P+V+ Y+ M+ GY  AG+LD A  + +EM    +  D  +YNT++      GR   AL V
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAV 180

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
             EM       D VTY  LL    K+  Y +  ++ ++M+    +P+++TY+ +++   +
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G   +A++  +     G + + V Y+ ++  LC     E A  L+ EM ++G  PNVVT
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKDVQEA----- 594
           +N +I    R    E  ++ +E+ + K   + N       L A C Q   D   A     
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQ-IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359

Query: 595 -GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK---PNVVTFSA 650
             R     I  +  L+      G+ +              + +H+LK K   P +++++ 
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDV-----------AVELLHQLKDKGCAPVLISYNT 408

Query: 651 ILNACSRCNSFEDASMLLEEL----RLFDNQVYG-VAHGLLMGYRDNIWVQALSLFDEVK 705
           +++  ++    ++A  LL E+       D   Y  +A GL    R++    A+  F +V+
Sbjct: 409 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC---REDRIEDAIRAFGKVQ 465

Query: 706 LMDSSTASAFYNAL 719
            M     +  YNA+
Sbjct: 466 DMGIRPNTVLYNAI 479



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 127/297 (42%), Gaps = 55/297 (18%)

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL---GRFEEALLVCKEMESSGIRK 437
           + G LD+AL +    +       R    T  ++  KL   GR  EA  V   + + G   
Sbjct: 77  RRGELDEALRLVGSAR-------RPDAGTCAALIKKLSASGRTAEARRV---LAACG--P 124

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D + YNA++ GY   G+ D  RR+  +M    V P+  TY+TLI      G    A+ + 
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVL 181

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E  +     DVV Y+ L++A CK    + A+ LLDEM  +G  P++VTYN +++     
Sbjct: 182 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI--- 238

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI---IKVFGQLVAEKAG 614
              E  VDD    L                 K++   G   N +   I + G   AE+  
Sbjct: 239 -CQEGRVDDAIEFL-----------------KNLPSYGCEPNTVSYNIVLKGLCTAERWE 280

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             ++             +  +M +    PNVVTF+ +++   R    E A  +LE++
Sbjct: 281 DAEE-------------LMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 324


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 233/486 (47%), Gaps = 14/486 (2%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           K  SA++  LG+   ++    + +   + G    +Y F+  I   GR+G   EA  +   
Sbjct: 228 KTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKR 287

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           M      P++VTY  +IDA    G    +  E+F  M  +  +PDR+T+ +LL   S  G
Sbjct: 288 MDDAGCGPDVVTYTVLIDALCNAG-KLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHG 346

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             +A +  ++EM   G   D+ T+  L+DA+CK  ++D AF  +  M  + ++PN+ TY+
Sbjct: 347 DLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYN 406

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+I G  +  RLD+AL +F+ M+ LG+     +Y   +  Y K G   +A+   ++M+++
Sbjct: 407 TLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTN 466

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI  + V  NA L    +QG+ +E +  F  +K   ++P+ +TY+ L+  Y K G   +A
Sbjct: 467 GIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDA 526

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           +++  E ++ G   +VV+ ++LID L K   V+ A  +   M +  + P VVTYN+++  
Sbjct: 527 IKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAG 586

Query: 554 FGRSA----TTECTVDDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
            G+       T      +  D      S N  LD +C   + D+          +  F  
Sbjct: 587 LGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPD 646

Query: 608 LVAEKAGQGK--KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
           ++          KENR          +F +M K+ I P+ VT   +L    +    EDA 
Sbjct: 647 VLTYNTVIYGLIKENRVNYAFW----LFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAF 701

Query: 666 MLLEEL 671
            + +E 
Sbjct: 702 RVAKEF 707



 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 219/441 (49%), Gaps = 32/441 (7%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y++  LI    +SG+C+EA+ V+  M    +KP+L TY+A++ A GK   D + V+ +  
Sbjct: 193 YSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRR-DIETVMGLLQ 251

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +M   G++P+  TF   + +  R G  + A  +   M   G   D+ TY  L+DA+C   
Sbjct: 252 EMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAG 311

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +++ A E+  +M A +  P+ VTY T++D ++  G LD     +SEM+  G   D V++ 
Sbjct: 312 KLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFT 371

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            ++    K+G+ +EA      M+  G+  +  TYN L+ G  +  + DE   +F  M++ 
Sbjct: 372 ILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESL 431

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            +     TY   ID Y K G   +A++ F + K  G+  ++V  +A + +L + G +E A
Sbjct: 432 GLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEA 491

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
               + + K G+ P+ +TYN ++  +G++      VDD  + L + +E+      C   D
Sbjct: 492 KEFFNGLKKCGLAPDAITYNILMRCYGKAG----RVDDAIKLLSEMEENG-----C---D 539

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
            +V       + + K      A++  +  K             +FQ+M ++K+ P VVT+
Sbjct: 540 PEVVIINSLIDTLYK------ADRVDEAWK-------------MFQRMKEMKLAPTVVTY 580

Query: 649 SAILNACSRCNSFEDASMLLE 669
           + +L    +    ++A+ L +
Sbjct: 581 NTLLAGLGKEGRVQEATALFK 601



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 177/678 (26%), Positives = 295/678 (43%), Gaps = 94/678 (13%)

Query: 156  ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL-----ASAMISILGRLGKVD 210
            A  Y   +   G  GE  KAI+ F       E+    G +      +A +  L   G+++
Sbjct: 437  AYTYILFIDYYGKSGESGKAIKTF-------EKMKTNGIVPNIVACNASLYSLAEQGRLE 489

Query: 211  LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
             AK  F      G       ++ L+  YG++G   +AI + + M+     P +V  N++I
Sbjct: 490  EAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLI 549

Query: 271  DACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
            D   K   VD     ++F  M    + P  +T+N+LLA   + G  + A  LF  M+   
Sbjct: 550  DTLYKADRVD--EAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADD 607

Query: 330  IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
               +  ++NTLLD +CK  ++DLA +++  M   N  P+V+TY+T+I G  K  R++ A 
Sbjct: 608  CPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAF 667

Query: 390  NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE-MESSGIRKDAVTYNALLGG 448
             +F +MK + I  D V+  T+L    K GR E+A  V KE +   G   D   +  L+GG
Sbjct: 668  WLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGG 726

Query: 449  -----------------------------------YGKQGKYDEVRRMFEQM-KADCVSP 472
                                                 K GK  +   +F ++ K+ C++P
Sbjct: 727  ILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITP 786

Query: 473  NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
            +L  Y++LID   K  L + A  +F + K AG   DV  Y+  +DAL K+G ++    L 
Sbjct: 787  SLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLY 846

Query: 533  DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD---------------------DVERDL 571
            +EM   G +PN +T+N +I    +S + +  +D                     D    L
Sbjct: 847  EEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKL 906

Query: 572  GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
            G+ +E+        Q  +++ + G   N    ++  L+     QG  E  C         
Sbjct: 907  GRLEEA-------KQFFEEMLDYGCMPN--CPLYNILMNGFGKQGDVETACE-------- 949

Query: 632  VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--Y 689
            +F++M K  I+P++ ++S +++        +DA    EEL+L       V + L++    
Sbjct: 950  LFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLG 1009

Query: 690  RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVW 749
            R     +ALSLFDE++    +     YNAL   L   G    A  +  E + + +  NV+
Sbjct: 1010 RSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVF 1069

Query: 750  SESCLDL-HLMSSGAARA 766
            + + L   H MS    RA
Sbjct: 1070 TYNALIRGHSMSGNPDRA 1087



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 226/485 (46%), Gaps = 17/485 (3%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            +I +L + G    A  ++   ++EG   ++  +SAL+ A G+    +  + +   M+  
Sbjct: 197 GLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESL 256

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
            L+PN+ T+   I   G+ G        I   M   G  PD +T+  L+ A+C+ G L  
Sbjct: 257 GLRPNIYTFTICIRILGRAG-KIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKL-N 314

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A+ LF +M       D  TY TLLD       +D   E  +EM A    P+VVT++ +I
Sbjct: 315 NAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILI 374

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D   K G++D+A      MK  G+  +  +YNT++    +L R +EAL +   MES G+ 
Sbjct: 375 DALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLE 434

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             A TY   +  YGK G+  +  + FE+MK + + PN++  +  +   ++ G  +EA + 
Sbjct: 435 TTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEF 494

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F   K+ GL  D + Y+ L+    K G V+ A+ LL EM + G  P VV  NS+ID   +
Sbjct: 495 FNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYK 554

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDD--KDVQEAGRTDNQIIKVFGQLVAEKAG 614
           +      VD+  +   + KE      + + +     + + GR   +   +F  ++A+   
Sbjct: 555 AD----RVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRV-QEATALFKGMIADDCP 609

Query: 615 QGKKENRCRQEILC-------ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
                     + LC        L +  +M ++   P+V+T++ ++    + N    A  L
Sbjct: 610 PNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWL 669

Query: 668 LEELR 672
             +++
Sbjct: 670 FHQMK 674



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 184/351 (52%), Gaps = 4/351 (1%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNT--VYAFSALISAYGRSGYCQEAISVFNSMKR 256
            ++  L + GK   A N+F   L + +  T  + A+++LI    ++   + A  +F  MK 
Sbjct: 758  LVKFLCKHGKAVDAYNVF-LKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKN 816

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                P++ TYN  +DA GK G   K + +++++ML  G +P+ IT N ++    +    +
Sbjct: 817  AGCTPDVFTYNLFLDALGKSG-KIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLD 875

Query: 317  AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
             A +L+ +++        +TY  L+D + K  +++ A +   EM      PN   Y+ ++
Sbjct: 876  KAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILM 935

Query: 377  DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            +G+ K G ++ A  +F  M   GI  D  SY+ ++     +G+ ++AL   +E++ SG+ 
Sbjct: 936  NGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLD 995

Query: 437  KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             D V YN ++ G G+  + +E   +F++M+   ++P+L TY+ LI      G+ +EA ++
Sbjct: 996  PDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKM 1055

Query: 497  FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
            + E +  GL+ +V  Y+ALI     +G  + A ++  +M   G RPN  T+
Sbjct: 1056 YEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTF 1106



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 152/306 (49%), Gaps = 1/306 (0%)

Query: 210  DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
            ++A  +F    N G    V+ ++  + A G+SG  +E   ++  M     KPN +T+N V
Sbjct: 805  EMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIV 864

Query: 270  IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
            I    K        ++++ D++     P   T+  L+    + G  E A+  F EM+  G
Sbjct: 865  IFGLVKSN-SLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYG 923

Query: 330  IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
               +   YN L++   K   ++ A E+   M  + I P++ +YS M+D     G++DDAL
Sbjct: 924  CMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDAL 983

Query: 390  NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            + F E+K  G+  D V YN +++   +  R EEAL +  EM + GI  D  TYNAL+   
Sbjct: 984  HYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNL 1043

Query: 450  GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            G  G  +E  +M+E+++   + PN+ TY+ LI  +S  G    A  ++++    G + + 
Sbjct: 1044 GIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNT 1103

Query: 510  VLYSAL 515
              ++ L
Sbjct: 1104 GTFAQL 1109



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 217/491 (44%), Gaps = 51/491 (10%)

Query: 245 QEAISVFNSMKRYNLKPNLV----TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
            +A S FNS+      P ++    T N V++   +     + +V +F+ M +  ++    
Sbjct: 103 NQAFSFFNSVAEM---PRVIHTTETCNYVLEML-RAHRRVEDMVVVFNLMQKQIIKRSIN 158

Query: 301 TFNSLLAVCS-RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           T+ ++  V   RGGL EA   L  +M   G   + ++Y  L+  + K      A ++   
Sbjct: 159 TYLTIFKVLYIRGGLREAPVAL-EKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRR 217

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M ++ I P++ TYS ++    K   ++  + +  EM+ LG+  +  ++   + I  + G+
Sbjct: 218 MVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGK 277

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            +EA  + K M+ +G   D VTY  L+      GK +  + +F +MKA    P+ +TY T
Sbjct: 278 IDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYIT 337

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           L+D +S  G      + + E +  G   DVV ++ LIDALCK G V+ A   LD M K+G
Sbjct: 338 LLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQG 397

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           + PN+ TYN++I    R              L +  E+  L+   S +   ++    T  
Sbjct: 398 VAPNLHTYNTLICGLLR--------------LNRLDEA--LELFNSMESLGLETTAYTYI 441

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
             I  +G     K+G+  K           +  F+KM    I PN+V  +A L + +   
Sbjct: 442 LFIDYYG-----KSGESGKA----------IKTFEKMKTNGIVPNIVACNASLYSLAEQG 486

Query: 660 SFEDASMLLEELRLFDNQVYGVAHGLLM------GYRDNIWVQALSLFDEVKLMDSSTAS 713
             E+A      L+        + + +LM      G  D+    A+ L  E++        
Sbjct: 487 RLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDD----AIKLLSEMEENGCDPEV 542

Query: 714 AFYNALTDMLW 724
              N+L D L+
Sbjct: 543 VIINSLIDTLY 553



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 90/181 (49%), Gaps = 1/181 (0%)

Query: 195  LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
            L + +++  G+ G V+ A  +F   + EG    + ++S ++      G   +A+  F  +
Sbjct: 930  LYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEEL 989

Query: 255  KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
            K   L P+LV YN +I+  G+     +  + +FD+M   G+ PD  T+N+L+      G+
Sbjct: 990  KLSGLDPDLVCYNLMINGLGRSQ-RVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGM 1048

Query: 315  WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             E A  ++ E+  +G++ ++FTYN L+         D A+ +  +M      PN  T++ 
Sbjct: 1049 VEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQ 1108

Query: 375  M 375
            +
Sbjct: 1109 L 1109



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 93/182 (51%), Gaps = 3/182 (1%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
            Y  L+   G +G+   A + F   VK   R +   K  S M+  L  +GKVD A + FE 
Sbjct: 931  YNILMNGFGKQGDVETACELFRRMVKEGIRPDL--KSYSIMVDCLCMVGKVDDALHYFEE 988

Query: 219  ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                G    +  ++ +I+  GRS   +EA+S+F+ M+   + P+L TYNA+I   G  G+
Sbjct: 989  LKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGM 1048

Query: 279  DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
              +   ++++++   G++P+  T+N+L+   S  G  + A  ++ +M+  G   +  T+ 
Sbjct: 1049 -VEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFA 1107

Query: 339  TL 340
             L
Sbjct: 1108 QL 1109



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 145/345 (42%), Gaps = 42/345 (12%)

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N VL +     R E+ ++V   M+   I++   TY  +      +G   E     E+M+ 
Sbjct: 126 NYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRK 185

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
                N  +Y  LI +  K G  +EA++++R     G+K  +  YSAL+ AL K   +E+
Sbjct: 186 VGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIET 245

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKESAN----LD 581
            + LL EM   G+RPN+ T+   I   GR+   +     ++R  D G   +       +D
Sbjct: 246 VMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLID 305

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL-----------CIL 630
           A+C+        AG+ +N       +L  +      K +R     L            I 
Sbjct: 306 ALCN--------AGKLNNA-----KELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIK 352

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA------HG 684
             + +M      P+VVTF+ +++A  +    ++A   L+ ++       GVA      + 
Sbjct: 353 EFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMK-----KQGVAPNLHTYNT 407

Query: 685 LLMG-YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           L+ G  R N   +AL LF+ ++ +   T +  Y    D     G+
Sbjct: 408 LICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGE 452


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 188/349 (53%), Gaps = 5/349 (1%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-C 273
           +++  +N GY   V+ FS L++   + G    A+ + N M     KPNL TY  +ID  C
Sbjct: 369 VYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFC 428

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQ 332
            KG ++   +  I  +ML  G   + + +N+L+ A+C  G + EA  ++F EM  +G   
Sbjct: 429 KKGQLEEAGL--ILREMLTKGFSLNTVGYNALISALCKHGKIHEAL-DMFGEMSSKGCKP 485

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           DIFT+N+L+  +C+  +M+ A  +  +M  + +  N VT++T+I  + + G + +AL + 
Sbjct: 486 DIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLV 545

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           ++M F G  LD ++YN ++    K G  E+ L + +EM   G+    +T N L+ G+   
Sbjct: 546 NDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTA 605

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           GK          M     SP+++TY++LI+   K G  +EA+ +F + +  G++ D + Y
Sbjct: 606 GKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITY 665

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + LI  LC+ G  + A  LL    + G  PN VT+N ++  FG+ + +E
Sbjct: 666 NTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSE 714



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 230/476 (48%), Gaps = 39/476 (8%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           +   +I  L +  +VD A  + E     G    V  F+ +I  + R     E   + + M
Sbjct: 247 IYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRM 306

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
                 PN +TY  ++   C    +D          +L     P+ + FN+L+    R G
Sbjct: 307 ILKGFTPNDMTYGYLMHGLCKTCRIDEAQA------LLSKVPGPNVVHFNTLVNGFVRNG 360

Query: 314 -LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            L EA   ++++M++ G   D+FT++TL++ +CK      A E++ +M AK   PN+ TY
Sbjct: 361 RLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTY 420

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +IDG+ K G+L++A  +  EM   G  L+ V YN ++S   K G+  EAL +  EM S
Sbjct: 421 TILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSS 480

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G + D  T+N+L+ G  +  + ++   ++  M  + V  N +T++TLI  + + G  +E
Sbjct: 481 KGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQE 540

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A+++  +    G   D + Y+ LI ALCK G VE  + L +EM ++G+ P+++T N +I+
Sbjct: 541 ALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILIN 600

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
            F       CT   V   L              +  +D+   G + +  I  +  L+   
Sbjct: 601 GF-------CTAGKVHNAL--------------EFMRDMIHRGFSPD--IVTYNSLINGL 637

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
             +G+ +          L +F+K+    I+P+ +T++ ++    R  +F+DA  LL
Sbjct: 638 CKRGRIQEA--------LNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLL 685



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/511 (23%), Positives = 228/511 (44%), Gaps = 40/511 (7%)

Query: 165 ELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETA-LNEG 223
           E  +  EW + ++ F     +E R++        +  +L     V+ +  IF+ A   +G
Sbjct: 43  ESAHETEWERLLKPFDL---KELRRSFNKITPFQLCKLLELPLDVETSMEIFKWAGAQKG 99

Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV 283
           Y ++   +  LI   G +   +    +   MK   +      +  ++   G+ G+  +  
Sbjct: 100 YCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQAT 159

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
             + D       +P   ++N +L V   G     A N+F +M+ +G+  + +T+  ++ A
Sbjct: 160 RLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKA 219

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +C   ++D A  ++ +M      PN + Y T+ID  +K  R+D+AL +  EM  +G   D
Sbjct: 220 LCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPD 279

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             ++NTV+  + +L R  E   +   M   G   + +TY  L+ G  K  + DE + +  
Sbjct: 280 VNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLS 339

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ-IFREFKQAGLKADVVLYSALIDALCKN 522
           ++      PN++ ++TL++ + + G   EA   ++ +    G   DV  +S L++ LCK 
Sbjct: 340 KVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKK 395

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           GL  SA+ L+++M  +G +PN+ TY  +ID F +                 Q E A L  
Sbjct: 396 GLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKG---------------QLEEAGLIL 440

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
                 +++   G + N +   +  L++     GK            L +F +M     K
Sbjct: 441 ------REMLTKGFSLNTV--GYNALISALCKHGKIHEA--------LDMFGEMSSKGCK 484

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELRL 673
           P++ TF++++    R +  EDA  L  ++ L
Sbjct: 485 PDIFTFNSLIFGLCRVDEMEDALALYRDMVL 515



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 113/221 (51%), Gaps = 3/221 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  L R+ +++ A  ++   + EG       F+ LI A+ R G  QEA+ + N M  
Sbjct: 491 NSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLF 550

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
                + +TYN +I A C  G V+    + +F++M+R G+ P  IT N L+      G  
Sbjct: 551 RGCPLDEITYNGLIKALCKTGAVE--KGLGLFEEMIRKGLTPSIITCNILINGFCTAGKV 608

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A     +M+HRG   DI TYN+L++ +CK  ++  A  +  ++ A+ I P+ +TY+T+
Sbjct: 609 HNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTL 668

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           I    + G  DDA  +       G   + V++N ++  + K
Sbjct: 669 ICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGK 709



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 11/161 (6%)

Query: 151 FKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILG--RL 206
           F+ C  D+ T+  L++ L   G   K +  F   +    RK     + +  I I G    
Sbjct: 550 FRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMI----RKGLTPSIITCNILINGFCTA 605

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GKV  A       ++ G+   +  +++LI+   + G  QEA+++F  ++   ++P+ +TY
Sbjct: 606 GKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITY 665

Query: 267 NAVID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL 306
           N +I   C +G  D      +    + NG  P+ +T+N L+
Sbjct: 666 NTLICWLCREGAFD--DACFLLYRGVENGFVPNDVTWNILV 704


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 189/359 (52%), Gaps = 1/359 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G V++ + + +    +G    V  ++A I  Y +         +   M++  +  N
Sbjct: 239 LCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACN 298

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           +VTY  +I      G   +    +F++M   G++ D   + S+++   R G  + A  LF
Sbjct: 299 VVTYTLLIHGFSNIG-KIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLF 357

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           +EM  +G+     TY  L+  +CK  QM+ A  ++ EM  K I  N V ++T+IDGY ++
Sbjct: 358 DEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCES 417

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G +D+AL +   M+  G+  D  +YN++ S   KL R +EA  +   M   G+  + +++
Sbjct: 418 GMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSF 477

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             L+  Y K+G + E +R+F +M+     PN++TY+ LID YSK G  KEA ++  E + 
Sbjct: 478 TTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELEN 537

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            GL  DV   ++LI   C +G V+ A+ L DEM + G+ PNVVTY ++I    +   +E
Sbjct: 538 RGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSE 596



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 181/353 (51%), Gaps = 5/353 (1%)

Query: 202 ILGRLGKVDLA--KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I G   ++DL     I      EG    V  ++ LI  +   G  +EA  +F  M+   +
Sbjct: 271 IEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGI 330

Query: 260 KPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           + ++  Y ++I   C  G V  K  + +FD+M   G+ P   T+ +L+    + G  EAA
Sbjct: 331 EADVYVYTSIISCNCRSGNV--KRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAA 388

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           + L NEM  +GID +   +NTL+D  C+   +D A  +   M  K +  +V  Y+++  G
Sbjct: 389 QMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASG 448

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K  R D+A  +   M   G+  + +S+ T++ IY K G F EA  V +EME  G   +
Sbjct: 449 LCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPN 508

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            +TYN L+ GY K+G   E  ++ ++++   + P++ T ++LI      G    A+++F 
Sbjct: 509 IITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFD 568

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           E  Q GL  +VV Y+A+I  L K+G  E A  L DEM + G+ P+   Y+S++
Sbjct: 569 EMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 176/323 (54%), Gaps = 1/323 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I     +GK++ A+ +FE    +G    VY ++++IS   RSG  + A+ +F+ M  
Sbjct: 303 TLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTD 362

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P+  TY A+I    K G   +    + ++M   G+  + + FN+L+      G+ +
Sbjct: 363 KGLIPSAHTYGALIHGVCKAG-QMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD 421

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L   M  +G++ D+F YN++   +CK  + D A  ++  M  + +SPN ++++T+I
Sbjct: 422 EALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLI 481

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y K G   +A  +F EM+  G   + ++YN ++  Y+K G  +EA  +  E+E+ G+ 
Sbjct: 482 DIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLI 541

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  T  +L+ G    GK D   ++F++M    + PN++TY+ +I   SK G  +EA ++
Sbjct: 542 PDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKL 601

Query: 497 FREFKQAGLKADVVLYSALIDAL 519
           + E K+ GL  D  +YS+L+ +L
Sbjct: 602 YDEMKETGLTPDDTVYSSLVGSL 624



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 217/467 (46%), Gaps = 57/467 (12%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
           F   +E F+ M + G   D  +    L    RGG  ++    F  MV+  ++  +++   
Sbjct: 175 FGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 234

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK------------------ 381
           +LD +CK   +++  ++M E+ AK +  NVVTY+  I+GY K                  
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 294

Query: 382 -----------------AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
                             G++++A  +F EM+  GI  D   Y +++S   + G  + AL
Sbjct: 295 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 354

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
           ++  EM   G+   A TY AL+ G  K G+ +  + +  +M+   +  N + ++TLID Y
Sbjct: 355 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 414

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            + G+  EA+++    ++ GL++DV  Y+++   LCK    + A  LL  M + G+ PN 
Sbjct: 415 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 474

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
           +++ ++ID + +    E    + +R   + +E  N+  + +    +V   G +    +K 
Sbjct: 475 MSFTTLIDIYCK----EGNFVEAKRVFREMEEKGNVPNIITY---NVLIDGYSKRGNMKE 527

Query: 605 FGQLVAEKAGQGKKEN--RCRQEI--LCI-------LGVFQKMHKLKIKPNVVTFSAILN 653
             +L  E   +G   +   C   I   CI       L +F +M +  + PNVVT++A+++
Sbjct: 528 AHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMIS 587

Query: 654 ACSRCNSFEDASMLLEELRLF----DNQVYGVAHGLLMGYRDNIWVQ 696
             S+    E+A  L +E++      D+ VY    G L    ++I +Q
Sbjct: 588 GLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADESISMQ 634



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 176/358 (49%), Gaps = 10/358 (2%)

Query: 154 CGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK 213
           C    YT L+    N G+  +A +   F   RE+       + +++IS   R G V  A 
Sbjct: 297 CNVVTYTLLIHGFSNIGKIEEAQR--LFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 354

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA- 272
            +F+   ++G   + + + ALI    ++G  + A  + N M+   +  N V +N +ID  
Sbjct: 355 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 414

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C  G VD    +++   M + G++ D   +NS+ +   +    + A+ L   MV RG+  
Sbjct: 415 CESGMVDEALRLQVV--MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSP 472

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           +  ++ TL+D  CK      A  +  EM  K   PN++TY+ +IDGY+K G + +A  + 
Sbjct: 473 NTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLK 532

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            E++  G+  D  +  +++      G+ + AL +  EM   G+  + VTY A++ G  K 
Sbjct: 533 DELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKD 592

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           G+ +E  +++++MK   ++P+   YS+L+     G L+     I  + + + +KA+ V
Sbjct: 593 GRSEEAFKLYDEMKETGLTPDDTVYSSLV-----GSLHSADESISMQIQGSQVKANKV 645



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 192/427 (44%), Gaps = 42/427 (9%)

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           F+ L  V +   ++  A   F  M  +G   D  +    L A+ +G Q+D        M 
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 221

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK---LG 418
             ++   V + + ++DG  K G ++    +  E+   G+  + V+YN  +  Y K   LG
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
              E L +   ME  G+  + VTY  L+ G+   GK +E +R+FE+M+   +  ++  Y+
Sbjct: 282 GVAEILTL---MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYT 338

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           ++I    + G  K A+ +F E    GL      Y ALI  +CK G +E+A  L++EM  +
Sbjct: 339 SIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGK 398

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTV--------DDVERDLGKQKESANLDAMCSQDDKD 590
           GI  N V +N++ID +  S   +  +          +E D+      A+   +C  + KD
Sbjct: 399 GIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIAS--GLCKLNRKD 456

Query: 591 --------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
                   + E G + N +   F  L+     +G      R        VF++M +    
Sbjct: 457 EAKGLLFSMVERGVSPNTM--SFTTLIDIYCKEGNFVEAKR--------VFREMEEKGNV 506

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEEL--RLFDNQVY---GVAHGLLMGYRDNIWVQA 697
           PN++T++ +++  S+  + ++A  L +EL  R     VY    + HG  +   D     A
Sbjct: 507 PNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECI---DGKVDMA 563

Query: 698 LSLFDEV 704
           L LFDE+
Sbjct: 564 LKLFDEM 570



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 151/354 (42%), Gaps = 41/354 (11%)

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           ++ +  +YA    F EAL   + ME  G   D  +    L    + G+ D   R F +M 
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 221

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V   + + + ++D   K G  +   ++  E    G+KA+VV Y+A I+   K   + 
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
               +L  M KEG+  NVVTY  +I  F               ++GK +E+  L      
Sbjct: 282 GVAEILTLMEKEGVACNVVTYTLLIHGFS--------------NIGKIEEAQRL------ 321

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
             ++++E G   +  + V+  +++     G   N  R  +L     F +M    + P+  
Sbjct: 322 -FEEMREKGIEAD--VYVYTSIISCNCRSG---NVKRALVL-----FDEMTDKGLIPSAH 370

Query: 647 TFSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGYRDNIWVQA---LSL 700
           T+ A+++   +    E A ML+ E++   +  N V  + + L+ GY ++  V     L +
Sbjct: 371 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPV--IFNTLIDGYCESGMVDEALRLQV 428

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
             E K ++S   +  YN++   L    +K  A+ ++     R V  N  S + L
Sbjct: 429 VMEKKGLESDVFA--YNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 480


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 229/475 (48%), Gaps = 34/475 (7%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            +I  + +LG+++ A ++      +GY   V ++S +I+ Y R G   +   +   MK+  
Sbjct: 675  VIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKG 734

Query: 259  LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
            LKPN  TY ++I    +         E F +M+  G+ PD I + +L+   C RG +  A
Sbjct: 735  LKPNSYTYGSIIGLLCRI-CKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDI-RA 792

Query: 318  ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
            A   F EM  R I  D+ TY  ++   C+   M  A ++  EM  + + P+++T++ +++
Sbjct: 793  ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMN 852

Query: 378  GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            GY KAG + DA  + + M   G   + V+Y T++    K G  + A  +  EM   G++ 
Sbjct: 853  GYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 912

Query: 438  DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
            +  TYN+++ G  K G  +E  ++  + +A  ++ + +TY+TL+D Y K G   +A +I 
Sbjct: 913  NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 972

Query: 498  REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
             E    GL+  +V ++ L++  C +G++E    LL+ M  +GI PN  T+N ++  +   
Sbjct: 973  TEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQY--- 1029

Query: 558  ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
                C  ++++      K+      MCS   + V+  G+T   ++K          G   
Sbjct: 1030 ----CIRNNLKAATAIYKD------MCS---RGVEPDGKTYENLVK----------GHCN 1066

Query: 618  KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              N      L     FQ+M       +V T+S ++    +   F +A  + +++R
Sbjct: 1067 ARNMKEAWFL-----FQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMR 1116



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 186/340 (54%), Gaps = 1/340 (0%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +F      G    V +++ +I    + G   EA  +   M+     P++++Y+ VI+   
Sbjct: 656 VFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYC 715

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           + G +   V ++ + M + G++P+  T+ S++ +  R      A   F+EM+ +GI  D 
Sbjct: 716 RFG-ELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDT 774

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
             Y TL+D  CK   +  A +   EM +++I+P+V+TY+ +I G+ + G + +A  +F E
Sbjct: 775 IVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 834

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G+  D +++  +++ Y K G  ++A  V   M  +G   + VTY  L+ G  K+G 
Sbjct: 835 MLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 894

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            D    +  +M    + PN+ TY+++++   K G  +EA+++  EF+ AGL AD V Y+ 
Sbjct: 895 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 954

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           L+DA CK+G ++ A  +L EM  +G++P +VT+N +++ F
Sbjct: 955 LMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGF 994



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 183/357 (51%), Gaps = 1/357 (0%)

Query: 198  AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            ++I +L R+ K+  A+  F   + +G       ++ L+  + + G  + A   F  M   
Sbjct: 744  SIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSR 803

Query: 258  NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            ++ P+++TY A+I    + G D     ++F +ML  G++PD ITF  L+    + G  + 
Sbjct: 804  DITPDVLTYTAIISGFCQIG-DMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKD 862

Query: 318  ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
            A  + N M+  G   ++ TY TL+D +CK   +D A E++ EM    + PN+ TY+++++
Sbjct: 863  AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 922

Query: 378  GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            G  K+G +++A+ +  E +  G+  D V+Y T++  Y K G  ++A  +  EM   G++ 
Sbjct: 923  GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQP 982

Query: 438  DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
              VT+N L+ G+   G  ++  ++   M A  ++PN  T++ L+  Y      K A  I+
Sbjct: 983  TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIY 1042

Query: 498  REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            ++    G++ D   Y  L+   C    ++ A  L  EM  +G   +V TY+ +I  F
Sbjct: 1043 KDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1099



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 178/342 (52%), Gaps = 3/342 (0%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            +A+IS   ++G +  A  +F   L  G    +  F+ L++ Y ++G+ ++A  V N M +
Sbjct: 813  TAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQ 872

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
                PN+VTY  +ID   K G D     E+  +M + G+QP+  T+NS++  +C  G + 
Sbjct: 873  AGCSPNVVTYTTLIDGLCKEG-DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 931

Query: 316  EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            EA + L  E    G++ D  TY TL+DA CK  +MD A EI+ EM  K + P +VT++ +
Sbjct: 932  EAVK-LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVL 990

Query: 376  IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
            ++G+   G L+D   + + M   GI  +  ++N ++  Y      + A  + K+M S G+
Sbjct: 991  MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGV 1050

Query: 436  RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
              D  TY  L+ G+       E   +F++MK    S ++ TYS LI  + K   + EA +
Sbjct: 1051 EPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEARE 1110

Query: 496  IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
            IF + ++ GL AD  ++    D   K    ++ V  +DE+ +
Sbjct: 1111 IFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1152



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 139/562 (24%), Positives = 251/562 (44%), Gaps = 61/562 (10%)

Query: 194  KLASAMISILGRLGKVDLAKNIFE-----TALNEGYGNTVYAFSALISAYGRSGYCQEAI 248
            K+A ++IS      K+++ ++  +         + +G+    F          G   EA 
Sbjct: 559  KVAQSLISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPEAR 618

Query: 249  SVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
             VF  M  Y L  ++ + N  +    K        + +F +    GV  +  ++N ++  
Sbjct: 619  KVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHF 678

Query: 309  CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
              + G    A +L   M  +G   D+ +Y+T+++  C+  ++D  ++++ +M  K + PN
Sbjct: 679  VCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPN 738

Query: 369  VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
              TY ++I    +  +L +A   FSEM   GI  D + Y T++  + K G    A     
Sbjct: 739  SYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFY 798

Query: 429  EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            EM S  I  D +TY A++ G+ + G   E  ++F +M    + P+++T++ L++ Y K G
Sbjct: 799  EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAG 858

Query: 489  LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
              K+A ++     QAG   +VV Y+ LID LCK G ++SA  LL EM K G++PN+ TYN
Sbjct: 859  HIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 918

Query: 549  SIIDAFGRSATTECTVDDVERDLGKQKESANL-----------DAMCSQDDKDVQEAGRT 597
            SI++   +S   E  V      L  + E+A L           DA C   + D  +    
Sbjct: 919  SIVNGLCKSGNIEEAV-----KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ---- 969

Query: 598  DNQIIKVFGQLVAEKAGQGKKENRCRQEIL----CILGVFQKMHKL-------KIKPNVV 646
                     +++ E  G+G +       +L    C+ G+ +   KL        I PN  
Sbjct: 970  ---------EILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 1020

Query: 647  TFSAILNACSRCNSFEDASMLLEEL---------RLFDNQVYGVAHGLLMGYRDNIWVQA 697
            TF+ ++      N+ + A+ + +++         + ++N V G  +   M        +A
Sbjct: 1021 TFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMK-------EA 1073

Query: 698  LSLFDEVKLMDSSTASAFYNAL 719
              LF E+K    S + + Y+ L
Sbjct: 1074 WFLFQEMKGKGFSVSVSTYSVL 1095



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 183/374 (48%), Gaps = 3/374 (0%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            + ++    + G +  A   F    +      V  ++A+IS + + G   EA  +F+ M  
Sbjct: 778  TTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLC 837

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
              L+P+++T+  +++   K G   K    + + M++ G  P+ +T+ +L+  +C  G L 
Sbjct: 838  RGLEPDIITFTELMNGYCKAG-HIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL- 895

Query: 316  EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            ++A  L +EM   G+  +IFTYN++++ +CK   ++ A +++ E  A  ++ + VTY+T+
Sbjct: 896  DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955

Query: 376  IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
            +D Y K+G +D A  + +EM   G+    V++N +++ +   G  E+   +   M + GI
Sbjct: 956  MDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1015

Query: 436  RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
              +A T+N L+  Y  +        +++ M +  V P+  TY  L+  +      KEA  
Sbjct: 1016 APNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWF 1075

Query: 496  IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            +F+E K  G    V  YS LI    K      A  + D+M ++G+  +   ++   D   
Sbjct: 1076 LFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKY 1135

Query: 556  RSATTECTVDDVER 569
            +    +  VD ++ 
Sbjct: 1136 KGKRPDTIVDPIDE 1149


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 156/598 (26%), Positives = 268/598 (44%), Gaps = 74/598 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI +L +  ++D A  IFE           YA++ +I  YG +G   EA S+    K 
Sbjct: 307 TSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKA 366

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+++ YN ++   GK G      +  F++M ++   P+  T+N L+ +  + G  E
Sbjct: 367 RGCIPSVIAYNCILTCLGKKG-RLGEALRTFEEMKKDAA-PNLSTYNVLIDMLCKAGEVE 424

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AA  + + M   G+  ++ T N ++D +CK  ++D A  I   M  K  SP+ VT+ ++I
Sbjct: 425 AAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLI 484

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  K GR+DDA  ++ +M       + V Y +++  + K GR E+   + KEM   G  
Sbjct: 485 DGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCS 544

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D    NA +    K G+  + R +FE++K+    P++++YS LI    K G  +E  ++
Sbjct: 545 PDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYEL 604

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP-------------- 542
           F   K+ G   D   Y+  ID  CK+G V  A  LL+EM  +G +P              
Sbjct: 605 FYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAK 664

Query: 543 ---------------------NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
                                NVV Y+S+ID FG+              +G+  E+  + 
Sbjct: 665 IDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGK--------------VGRIDEAYLI- 709

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
                  +++ + G T N  +  +  L+        K     + ++C    FQ M  LK 
Sbjct: 710 ------MEELMQKGLTPN--VYTWNCLLDALV----KAEEINEALVC----FQNMKNLKG 753

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGYRDNIWVQAL 698
            PN +T+S ++N   R   F  A +  +E++   L  N +        +    NI  +A 
Sbjct: 754 TPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNI-AEAS 812

Query: 699 SLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDL 756
           SLF+  K       SA YNA+ + L +   +R  +   +  + R    N+ +++C+ L
Sbjct: 813 SLFERFKANGGVPDSASYNAIIEGLSY--SRRAMEAYKIFEETRMKGCNIHTKTCIAL 868



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 154/607 (25%), Positives = 273/607 (44%), Gaps = 82/607 (13%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           YT ++  L       +A++ F    + E+ +N     A + MI   G  GK D A ++ E
Sbjct: 306 YTSMIGVLCKGNRLDEAVEIFE---QMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLE 362

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                G   +V A++ +++  G+ G   EA+  F  MK+ +  PNL TYN +ID   K G
Sbjct: 363 RQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAG 421

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            + +   ++ D M   G+ P+ +T N ++    +    + A ++F  M H+    D  T+
Sbjct: 422 -EVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTF 480

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM-- 395
            +L+D + K  ++D A+ +  +M   +  PN V Y+++I  + K GR +D   +F EM  
Sbjct: 481 CSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIH 540

Query: 396 ---------------------------------KFLGIGLDRVSYNTVLSIYAKLGRFEE 422
                                            K  G   D +SY+ ++    K G   E
Sbjct: 541 RGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARE 600

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
              +   M+  G   D   YN  + G+ K GK ++  ++ E+MK     P ++TY ++ID
Sbjct: 601 TYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVID 660

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
             +K     EA  +F E K  GL+ +VV+YS+LID   K G ++ A  +++E+ ++G+ P
Sbjct: 661 GLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 720

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII 602
           NV T+N ++DA  ++                  E  N   +C Q+ K+++    T N I 
Sbjct: 721 NVYTWNCLLDALVKA------------------EEINEALVCFQNMKNLK---GTPNHI- 758

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCILGVF-QKMHKLKIKPNVVTFSAILNACSRCNSF 661
             +  L+            CR        VF Q+M K  +KPN +T++ ++   ++  + 
Sbjct: 759 -TYSILI---------NGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNI 808

Query: 662 EDASMLLEELR----LFDNQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFY 716
            +AS L E  +    + D+  Y  +  GL    R    ++A  +F+E ++   +  +   
Sbjct: 809 AEASSLFERFKANGGVPDSASYNAIIEGLSYSRRA---MEAYKIFEETRMKGCNIHTKTC 865

Query: 717 NALTDML 723
            AL D L
Sbjct: 866 IALLDAL 872



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/518 (24%), Positives = 227/518 (43%), Gaps = 79/518 (15%)

Query: 197 SAMISILGRLGKV---DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           SA  +++G L  V   D+   +F      GY  +V+ F+ +I  + R G    A+S+ + 
Sbjct: 199 SAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDE 258

Query: 254 MKRYNLKPNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           MK   L  ++V YN  ID  GK G VD     + F ++  +G+ PD +T+ S++ V  +G
Sbjct: 259 MKSNCLHADIVLYNVCIDCFGKAGKVDMAW--KFFHEIKSHGLLPDDVTYTSMIGVLCKG 316

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              + A  +F +M         + YNT++       + D A+ ++    A+   P+V+ Y
Sbjct: 317 NRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAY 376

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + ++    K GRL +AL  F EMK      +  +YN ++ +  K G  E A  V   M+ 
Sbjct: 377 NCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKE 435

Query: 433 SGI-----------------------------------RKDAVTYNALLGGYGKQGKYDE 457
           +G+                                     D VT+ +L+ G GKQG+ D+
Sbjct: 436 AGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDD 495

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             R++EQM      PN + Y++LI  + K G  ++  +IF+E    G   D+ L +A +D
Sbjct: 496 AYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMD 555

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            + K G      +L +E+   G  P+V++Y+ +I    ++       +  E     +++ 
Sbjct: 556 CVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFAR---ETYELFYAMKEQG 612

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
             LD                 N  I  F      K+G+  K              +Q + 
Sbjct: 613 CVLDT-------------HAYNTFIDGFC-----KSGKVNK-------------AYQLLE 641

Query: 638 KLKIK---PNVVTFSAILNACSRCNSFEDASMLLEELR 672
           ++K K   P VVT+ ++++  ++ +  ++A ML EE +
Sbjct: 642 EMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 679



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 180/348 (51%), Gaps = 6/348 (1%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           +L +A +  + + G+    + +FE   + G+   V ++S LI    ++G+ +E   +F +
Sbjct: 548 RLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYA 607

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           MK      +   YN  ID  C  G V+     ++ ++M   G QP  +T+ S++   ++ 
Sbjct: 608 MKEQGCVLDTHAYNTFIDGFCKSGKVN--KAYQLLEEMKTKGRQPTVVTYGSVIDGLAKI 665

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              + A  LF E    G++ ++  Y++L+D   K  ++D A+ IM E+  K ++PNV T+
Sbjct: 666 DRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 725

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + ++D   KA  +++AL  F  MK L    + ++Y+ +++   ++ +F +A +  +EM+ 
Sbjct: 726 NCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQK 785

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G++ + +TY  ++ G  K G   E   +FE+ KA+   P+  +Y+ +I+  S      E
Sbjct: 786 QGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAME 845

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV---SLLDEMTK 537
           A +IF E +  G         AL+DAL K+  +E A    ++L E+ K
Sbjct: 846 AYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREIAK 893



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 155/624 (24%), Positives = 263/624 (42%), Gaps = 70/624 (11%)

Query: 187 ERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE----GYGNTVYAFSALISAYGRSG 242
           ERK DQ     A  S+L  + K ++  + FE  L E    G+G +      LI +  +S 
Sbjct: 119 ERKTDQALCPEAYDSLLLVMAK-NVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSN 177

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAVIDACG----------------KGGVD-----FK 281
             +E   +   M+++  +P    Y  +I A                  + G +     F 
Sbjct: 178 KLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFT 237

Query: 282 HVVEIF-------------DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
            V+ +F             D+M  N +  D + +N  +    + G  + A   F+E+   
Sbjct: 238 TVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSH 297

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G+  D  TY +++  +CKG ++D A EI  +M      P    Y+TMI GY  AG+ D+A
Sbjct: 298 GLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEA 357

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV----TYNA 444
            ++    K  G     ++YN +L+   K GR  EAL   +EM     +KDA     TYN 
Sbjct: 358 YSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-----KKDAAPNLSTYNV 412

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+    K G+ +   ++ + MK   + PN++T + +ID   K     EA  IF       
Sbjct: 413 LIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKI 472

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
              D V + +LID L K G V+ A  L ++M      PN V Y S+I +F +    E   
Sbjct: 473 CSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKE-DG 531

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
             + +++  +  S +L  + +  D  V +AG T          L  E   +G   +    
Sbjct: 532 HKIFKEMIHRGCSPDLRLLNAYMDC-VFKAGETGKG-----RALFEEIKSRGFIPDVMSY 585

Query: 625 EILCILGV---------FQKMHKLKIKPNVV---TFSAILNACSRCNSFEDASMLLEELR 672
            IL I G+         ++  + +K +  V+    ++  ++   +      A  LLEE++
Sbjct: 586 SIL-IHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMK 644

Query: 673 LFDNQVYGVAHGLLMGYRDNI--WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKR 730
               Q   V +G ++     I    +A  LF+E K          Y++L D     G+  
Sbjct: 645 TKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRID 704

Query: 731 GAQLVVLEGKRRQVWENVWSESCL 754
            A L++ E  ++ +  NV++ +CL
Sbjct: 705 EAYLIMEELMQKGLTPNVYTWNCL 728



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/479 (23%), Positives = 213/479 (44%), Gaps = 25/479 (5%)

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           ++SLL V ++   ++    +  EM   G      T   L+ +  K  ++   F+++  M 
Sbjct: 131 YDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMR 190

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
                P    Y+T+I   +     D  L +F +M+ LG  +    + TV+ ++A+ GR +
Sbjct: 191 KFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLD 250

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
            AL +  EM+S+ +  D V YN  +  +GK GK D   + F ++K+  + P+ +TY+++I
Sbjct: 251 AALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMI 310

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
            V  KG    EA++IF + +Q         Y+ +I      G  + A SLL+     G  
Sbjct: 311 GVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCI 370

Query: 542 PNVVTYNSIIDAF---GRSATTECTVDDVERDLGKQKESAN--LDAMCSQDDKD------ 590
           P+V+ YN I+      GR      T +++++D      + N  +D +C   + +      
Sbjct: 371 PSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVR 430

Query: 591 --VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
             ++EAG   N ++ V   ++ ++  + KK +           +F+ M+     P+ VTF
Sbjct: 431 DAMKEAGLFPN-VMTV--NIMIDRLCKAKKLDEA-------CSIFEGMNHKICSPDEVTF 480

Query: 649 SAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKL 706
            ++++   +    +DA  L E++   D     V +  L+   ++         +F E+  
Sbjct: 481 CSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIH 540

Query: 707 MDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAAR 765
              S      NA  D ++  G+    + +  E K R    +V S S L   L+ +G AR
Sbjct: 541 RGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFAR 599



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 90/419 (21%), Positives = 176/419 (42%), Gaps = 54/419 (12%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y+++L + AK  +F+    +  EM  +G      T   L+    K  K  E   + + M
Sbjct: 130 AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCM 189

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           +     P    Y+TLI   S        + +F + ++ G +  V L++ +I    + G +
Sbjct: 190 RKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRL 249

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           ++A+SLLDEM    +  ++V YN  ID FG++   +                     M  
Sbjct: 250 DAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVD---------------------MAW 288

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
           +   +++  G   + +   +  ++    G   K NR  + +     +F++M + +  P  
Sbjct: 289 KFFHEIKSHGLLPDDV--TYTSMI----GVLCKGNRLDEAV----EIFEQMEQNRNVPCA 338

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL---MGYRDNIWVQALSLFD 702
             ++ ++        F++A  LLE  +        +A+  +   +G +  +  +AL  F+
Sbjct: 339 YAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLG-EALRTFE 397

Query: 703 EVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSG 762
           E+K  D++   + YN L DML   G+   A  V    K   ++ NV     + +++M   
Sbjct: 398 EMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNV-----MTVNIMIDR 451

Query: 763 AARAMVHAWLLNIHSIVFEG--HELPK-----LLSILTGWGKHSKVVGDGALRRAVEVL 814
             +A      L+    +FEG  H++         S++ G GK  +V  D A R   ++L
Sbjct: 452 LCKAKK----LDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRV--DDAYRLYEQML 504


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 192/357 (53%), Gaps = 3/357 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +++   R  ++ LA +     +  G+  ++  F +L++ + R     +A+ +F+ M 
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178

Query: 256 RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               KPN+V YN +ID  C    VD  + +++ + M ++G+ PD +T+NSL++     G 
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVD--NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           W  A  + + M  R I  D+FT+N L+DA  K  ++  A E   EM  +++ P++VTYS 
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I G     RLD+A  MF  M   G   D V+Y+ +++ Y K  + E  + +  EM   G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           + ++ VTY  L+ GY + GK +    +F +M    V PN++TY+ L+      G  ++A+
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            I  + ++ G+ AD+V Y+ +I  +CK G V  A  +   +  +G+ P++ TY +++
Sbjct: 417 VILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 170/332 (51%), Gaps = 1/332 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  +F+  +  GY   V  ++ +I    +S     A+ + N M++  + P++VTYN++I 
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
                G  +     +   M +  + PD  TFN+L+  C + G    A   + EM+ R +D
Sbjct: 230 GLCSSG-RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            DI TY+ L+  +C  +++D A E+   M +K   P+VVTYS +I+GY K+ +++  + +
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F EM   G+  + V+Y  ++  Y + G+   A  + + M   G+  + +TYN LL G   
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            GK ++   +   M+ + +  +++TY+ +I    K G   +A  I+      GL  D+  
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y+ ++  L K GL   A +L  +M ++GI PN
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 173/312 (55%), Gaps = 3/312 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I  L +  +VD A ++      +G G  V  +++LIS    SG   +A  + + M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGG 313
            +  + P++ T+NA+IDAC K G       E +++M+R  + PD +T++ L+  +C    
Sbjct: 248 TKREIYPDVFTFNALIDACVKEG-RVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           L E A  +F  MV +G   D+ TY+ L++  CK  +++   ++  EM  + +  N VTY+
Sbjct: 307 LDE-AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I GY +AG+L+ A  +F  M F G+  + ++YN +L      G+ E+AL++  +M+ +
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G+  D VTYN ++ G  K G+  +   ++  +    + P++ TY+T++    K GL +EA
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA 485

Query: 494 MQIFREFKQAGL 505
             +FR+ K+ G+
Sbjct: 486 DALFRKMKEDGI 497



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 188/401 (46%), Gaps = 34/401 (8%)

Query: 275 KGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           + G+ F  +   +++F  M++    P    F+ LL+  S+   ++    L+ +M   GI 
Sbjct: 54  RNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIP 113

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            ++ T N LL+  C+ +Q+ LA   + +M      P++VT+ ++++G+ +  R+ DAL M
Sbjct: 114 HNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYM 173

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F +M  +G   + V YNT++    K  + + AL +   ME  GI  D VTYN+L+ G   
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G++ +  RM   M    + P++ T++ LID   K G   EA + + E  +  L  D+V 
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           YS LI  LC    ++ A  +   M  +G  P+VVTY+ +I+ + +S   E          
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE---------- 343

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
                   +   C    + V     T   +I+  G   A K    ++             
Sbjct: 344 ------HGMKLFCEMSQRGVVRNTVTYTILIQ--GYCRAGKLNVAEE------------- 382

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           +F++M    + PN++T++ +L+        E A ++L +++
Sbjct: 383 IFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 160/313 (51%), Gaps = 1/313 (0%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +++ +F  M +    P++  ++ ++ A  K    +  V+ +++ M   G+  +  T N L
Sbjct: 64  DSLDLFFHMVQCRPLPSIADFSRLLSAISKMK-KYDVVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           L    R      A +   +M+  G +  I T+ +LL+  C+G ++  A  +  +M     
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            PNVV Y+T+IDG  K+ ++D+AL++ + M+  GIG D V+YN+++S     GR+ +A  
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           +   M    I  D  T+NAL+    K+G+  E    +E+M    + P+++TYS LI    
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
                 EA ++F      G   DVV YS LI+  CK+  VE  + L  EM++ G+  N V
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362

Query: 546 TYNSIIDAFGRSA 558
           TY  +I  + R+ 
Sbjct: 363 TYTILIQGYCRAG 375



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 149/333 (44%), Gaps = 42/333 (12%)

Query: 144 DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           D+L + E    G D  T+  L+  L + G WS A +  +   KRE   +           
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD----------- 255

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
                                     V+ F+ALI A  + G   EA   +  M R +L P
Sbjct: 256 --------------------------VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289

Query: 262 NLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           ++VTY+ +I   C    +D     E+F  M+  G  PD +T++ L+    +    E    
Sbjct: 290 DIVTYSLLIYGLCMYSRLD--EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           LF EM  RG+ ++  TY  L+   C+  ++++A EI   M    + PN++TY+ ++ G  
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
             G+++ AL + ++M+  G+  D V+YN ++    K G   +A  +   +   G+  D  
Sbjct: 408 DNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIW 467

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           TY  ++ G  K+G   E   +F +MK D + PN
Sbjct: 468 TYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 101/187 (54%)

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y  M+    +  +LDD+L++F  M           ++ +LS  +K+ +++  + + ++M+
Sbjct: 49  YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             GI  +  T N LL  + +  +         +M      P+++T+ +L++ + +G    
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +A+ +F +    G K +VV+Y+ +ID LCK+  V++A+ LL+ M K+GI P+VVTYNS+I
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228

Query: 552 DAFGRSA 558
                S 
Sbjct: 229 SGLCSSG 235


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 201/409 (49%), Gaps = 17/409 (4%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           K  SA++  LGR        ++ E     G    +Y ++  I   GR+G   +A  +  +
Sbjct: 228 KTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKT 287

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M+     P++VTY  +IDA C  G +D     E++  M  +  +PD +T+ +L++     
Sbjct: 288 MEDEGCGPDVVTYTVLIDALCAAGKLD--KAKELYTKMRASSHKPDLVTYITLMSKFGNY 345

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  E  +  ++EM   G   D+ TY  L++A+CK  ++D AF+++  M  + I PN+ TY
Sbjct: 346 GDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTY 405

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T+I G     RLD+AL +F+ M+ LG+     SY   +  Y KLG  E+AL   ++M+ 
Sbjct: 406 NTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKK 465

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            GI       NA L    + G+  E + +F  +    +SP+ +TY+ ++  YSK G   +
Sbjct: 466 RGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDK 525

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A ++  E    G + D+++ ++LID L K G V+ A  +   +    + P VVTYN +I 
Sbjct: 526 ATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILIT 585

Query: 553 AFGRSATTECTVDDVERDLGKQKES----------ANLDAMCSQDDKDV 591
             G+       +D      G  KES          A LD +C  D  D+
Sbjct: 586 GLGKEGKLLKALD----LFGSMKESGCPPNTVTFNALLDCLCKNDAVDL 630



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 195/387 (50%), Gaps = 36/387 (9%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I +LGR G++D A  I +T  +EG G  V  ++ LI A   +G   +A  ++  M+  + 
Sbjct: 269 IRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSH 328

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           KP+LVTY  ++   G  G D + V   + +M  +G  PD +T+  L+    + G  + A 
Sbjct: 329 KPDLVTYITLMSKFGNYG-DLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAF 387

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           ++ + M  RGI  ++ TYNTL+  +    ++D A E+   M +  ++P   +Y   ID Y
Sbjct: 388 DMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYY 447

Query: 380 AKAGRLDDALNMFSEMKFLGI---------------------------------GL--DR 404
            K G  + AL+ F +MK  GI                                 GL  D 
Sbjct: 448 GKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDS 507

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V+YN ++  Y+K G+ ++A  +  EM S G   D +  N+L+    K G+ DE  +MF +
Sbjct: 508 VTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGR 567

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           +K   ++P ++TY+ LI    K G   +A+ +F   K++G   + V ++AL+D LCKN  
Sbjct: 568 LKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDA 627

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSII 551
           V+ A+ +   MT     P+V+TYN+II
Sbjct: 628 VDLALKMFCRMTIMNCSPDVLTYNTII 654



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 151/617 (24%), Positives = 273/617 (44%), Gaps = 88/617 (14%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G+    Y+++ LI    + G+C+EA+ V+  M    LKP++ TY+A++ A G+   D   
Sbjct: 187 GFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRR-DTGT 245

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           ++++ ++M   G++P+  T+   + V  R G  + A  +   M   G   D+ TY  L+D
Sbjct: 246 IMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLID 305

Query: 343 AICKGAQMDLAFEIM-----------------------------------AEMPAKNISP 367
           A+C   ++D A E+                                    +EM A   +P
Sbjct: 306 ALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAP 365

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           +VVTY+ +++   K+G++D A +M   M+  GI  +  +YNT++S    L R +EAL + 
Sbjct: 366 DVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELF 425

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
             MES G+   A +Y   +  YGK G  ++    FE+MK   + P++   +  +   ++ 
Sbjct: 426 NNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEM 485

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G  +EA  IF +    GL  D V Y+ ++    K G ++ A  LL EM  EG  P+++  
Sbjct: 486 GRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVV 545

Query: 548 NSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
           NS+ID   ++      VD+  +  G+ K            D  +     T N +I   G+
Sbjct: 546 NSLIDTLYKAG----RVDEAWQMFGRLK------------DLKLAPTVVTYNILITGLGK 589

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
                  +GK        +L  L +F  M +    PN VTF+A+L+   + ++ + A  +
Sbjct: 590 -------EGK--------LLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKM 634

Query: 668 LEELRL---------FDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNA 718
              + +         ++  +YG+      GY       A   + ++K   S      Y  
Sbjct: 635 FCRMTIMNCSPDVLTYNTIIYGLIKEGRAGY-------AFWFYHQMKKFLSPDHVTLYTL 687

Query: 719 LTDMLWHFGQKRGAQLVVLEGKRR---QVWENVWSESCLDLHLMSSGAARAMVHAWLLNI 775
           L  ++   G+   A  +V+E   +   Q    VW E  ++  L+ +    A+  A  L  
Sbjct: 688 LPGVVKD-GRVEDAIKIVMEFVHQSGLQTSNQVWGE-LMECILIEAEIEEAISFAEGLVC 745

Query: 776 HSIVFEGHELPKLLSIL 792
           +SI  + + +  L+ +L
Sbjct: 746 NSICQDDNLILPLIRVL 762



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 187/388 (48%), Gaps = 13/388 (3%)

Query: 172  WSKAIQCFAFAVKREERKN-----------DQGKLASAMISILGRLGKVDLAKNIFETAL 220
            W + ++C     + EE  +               L   +I +L +  K   AK +F+   
Sbjct: 720  WGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFT 779

Query: 221  NE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
               G   T  +++ L+         + A+ +F  MK     PN+ TYN ++DA GK    
Sbjct: 780  KSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSK-R 838

Query: 280  FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
               + E++++ML  G +P+ IT N +++   +      A +L+ E++         TY  
Sbjct: 839  IDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGP 898

Query: 340  LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
            L+  + K  + + A +I  EMP     PN   Y+ +I+G+ KAG ++ A ++F  M   G
Sbjct: 899  LIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEG 958

Query: 400  IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
            I  D  SY  ++      GR ++A+   +E++ +G+  D V+YN ++ G GK  + +E  
Sbjct: 959  IRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEAL 1018

Query: 460  RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
             +F +MK   +SP L TY+ LI  +   G+  +A ++F E +  GL+ +V  Y+ALI   
Sbjct: 1019 SLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGH 1078

Query: 520  CKNGLVESAVSLLDEMTKEGIRPNVVTY 547
             K+G  + A S+  +M   G  PN  T+
Sbjct: 1079 SKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 160/669 (23%), Positives = 288/669 (43%), Gaps = 58/669 (8%)

Query: 145 ILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           ILK  E + CG D   YT L+  L   G+  KA + +   ++    K D     + M S 
Sbjct: 284 ILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYT-KMRASSHKPDLVTYITLM-SK 341

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
            G  G ++  K  +     +GY   V  ++ L+ A  +SG   +A  + + M+   + PN
Sbjct: 342 FGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPN 401

Query: 263 LVTYNAVI-----------------------------------DACGKGGVDFKHVVEIF 287
           L TYN +I                                   D  GK G D +  ++ F
Sbjct: 402 LHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLG-DPEKALDTF 460

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           + M + G+ P     N+ L   +  G    A+++FN++ + G+  D  TYN ++    K 
Sbjct: 461 EKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKA 520

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            Q+D A +++ EM ++   P+++  +++ID   KAGR+D+A  MF  +K L +    V+Y
Sbjct: 521 GQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTY 580

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N +++   K G+  +AL +   M+ SG   + VT+NALL    K    D   +MF +M  
Sbjct: 581 NILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTI 640

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
              SP++LTY+T+I    K G    A   + + K+      V LY+ L+  + K+G VE 
Sbjct: 641 MNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYT-LLPGVVKDGRVED 699

Query: 528 AVSLLDEMT-KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK---QKESANLD-- 581
           A+ ++ E   + G++ +   +  +++     A  E  +   E  +     Q ++  L   
Sbjct: 700 AIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLI 759

Query: 582 -AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL-CILGVFQKMHKL 639
             +C Q  K   +A +  ++  K  G     ++     +      I    L +F +M   
Sbjct: 760 RVLCKQ--KKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQA 697
              PN+ T++ +L+A  +    ++   L  E+     +   + H +++    + N   +A
Sbjct: 818 GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLH 757
           L L+ E+   D S     Y  L   L   G+   A  +  E    Q   N     C   +
Sbjct: 878 LDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPN-----CAIYN 932

Query: 758 LMSSGAARA 766
           ++ +G  +A
Sbjct: 933 ILINGFGKA 941



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 143/551 (25%), Positives = 257/551 (46%), Gaps = 39/551 (7%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            M+    + G++D A  +    L+EG    +   ++LI    ++G   EA  +F  +K   
Sbjct: 513  MMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLK 572

Query: 259  LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            L P +VTYN +I   GK G   K  +++F  M  +G  P+ +TFN+LL    +    + A
Sbjct: 573  LAPTVVTYNILITGLGKEGKLLK-ALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLA 631

Query: 319  RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
              +F  M       D+ TYNT++  + K  +   AF    +M  K +SP+ VT  T++ G
Sbjct: 632  LKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPG 690

Query: 379  YAKAGRLDDALNMFSEMKFL---GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
              K GR++DA+ +   M+F+   G+      +  ++         EEA+   + +  + I
Sbjct: 691  VVKDGRVEDAIKIV--MEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSI 748

Query: 436  RKDAVTYNALLGGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
             +D      L+    KQ K  + +++F++  K+    P   +Y+ L+D      + + A+
Sbjct: 749  CQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAAL 808

Query: 495  QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            ++F E K AG   ++  Y+ L+DA  K+  ++    L +EM   G +PN++T+N II A 
Sbjct: 809  KLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISAL 868

Query: 555  GRSATTECTVDDVERDLGKQKESANLDAM-CSQDD--KDVQEAGRTDNQIIKVFGQLVAE 611
             +S +    +D     L  +  S +     C+       + +AGR++ + +K+F ++   
Sbjct: 869  VKSNSINKALD-----LYYEIISGDFSPTPCTYGPLIGGLLKAGRSE-EAMKIFEEMPDY 922

Query: 612  KA------------GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
            +             G GK  N     I C L  F++M K  I+P++ +++ ++       
Sbjct: 923  QCKPNCAIYNILINGFGKAGN---VNIACDL--FKRMIKEGIRPDLKSYTILVECLFMTG 977

Query: 660  SFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYN 717
              +DA    EEL+L       V++ L++    +     +ALSLF E+K    S     YN
Sbjct: 978  RVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYN 1037

Query: 718  ALTDMLWHFGQ 728
            AL   + HFG 
Sbjct: 1038 AL---ILHFGN 1045



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 180/381 (47%), Gaps = 33/381 (8%)

Query: 275  KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
            K  +D K + + F   L  G  P   ++N L+       + EAA  LF EM + G   +I
Sbjct: 766  KKALDAKKLFDKFTKSL--GTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNI 823

Query: 335  FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            FTYN LLDA  K  ++D  FE+  EM  +   PN++T++ +I    K+  ++ AL+++ E
Sbjct: 824  FTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYE 883

Query: 395  MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
            +          +Y  ++    K GR EEA+ + +EM     + +   YN L+ G+GK G 
Sbjct: 884  IISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGN 943

Query: 455  YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
             +    +F++M  + + P+L +Y+ L++     G   +A+  F E K  GL  D V Y+ 
Sbjct: 944  VNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNL 1003

Query: 515  LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
            +I+ L K+  +E A+SL  EM   GI P + TYN++I  FG +   +          GK 
Sbjct: 1004 MINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVD--------QAGKM 1055

Query: 575  KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
             E             ++Q  G   N  +  +  L+    G  K  N+ R        VF+
Sbjct: 1056 FE-------------ELQFMGLEPN--VFTYNALIR---GHSKSGNKDRA-----FSVFK 1092

Query: 635  KMHKLKIKPNVVTFSAILNAC 655
            KM  +   PN  TF+ + N C
Sbjct: 1093 KMMIVGCSPNAGTFAQLPNKC 1113



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 158/312 (50%), Gaps = 8/312 (2%)

Query: 211  LAKNIFETAL-------NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
            L  NI E AL       N G    ++ ++ L+ A+G+S    E   ++N M     KPN+
Sbjct: 799  LGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNI 858

Query: 264  VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            +T+N +I A  K        ++++ +++     P   T+  L+    + G  E A  +F 
Sbjct: 859  ITHNIIISALVKSN-SINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFE 917

Query: 324  EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
            EM       +   YN L++   K   +++A ++   M  + I P++ +Y+ +++     G
Sbjct: 918  EMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTG 977

Query: 384  RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            R+DDA++ F E+K  G+  D VSYN +++   K  R EEAL +  EM++ GI  +  TYN
Sbjct: 978  RVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYN 1037

Query: 444  ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            AL+  +G  G  D+  +MFE+++   + PN+ TY+ LI  +SK G    A  +F++    
Sbjct: 1038 ALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIV 1097

Query: 504  GLKADVVLYSAL 515
            G   +   ++ L
Sbjct: 1098 GCSPNAGTFAQL 1109



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 134/604 (22%), Positives = 259/604 (42%), Gaps = 64/604 (10%)

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG-KGGVDFKHVVEIFDDMLRNGVQPDRI 300
           G  ++   VF+ M++  +  N  TY  +  A   KGG+  +        M + G   +  
Sbjct: 136 GRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGI--RQAPFALGKMRQAGFVLNAY 193

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           ++N L+    + G  + A  ++  M+  G+   + TY+ L+ A+ +        +++ EM
Sbjct: 194 SYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEM 253

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
               + PN+ TY+  I    +AGR+DDA  +   M+  G G D V+Y  ++      G+ 
Sbjct: 254 ETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKL 313

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           ++A  +  +M +S  + D VTY  L+  +G  G  + V+R + +M+AD  +P+++TY+ L
Sbjct: 314 DKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTIL 373

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           ++   K G   +A  +    +  G+  ++  Y+ LI  L     ++ A+ L + M   G+
Sbjct: 374 VEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGV 433

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR---- 596
            P   +Y   ID +G+    E  +D  E+   K++      A C+     + E GR    
Sbjct: 434 APTAYSYVLFIDYYGKLGDPEKALDTFEK--MKKRGIMPSIAACNASLYSLAEMGRIREA 491

Query: 597 -----------------TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
                            T N ++K +      KAGQ  K  +   E+L            
Sbjct: 492 KDIFNDIHNCGLSPDSVTYNMMMKCY-----SKAGQIDKATKLLTEML----------SE 536

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQA 697
             +P+++  +++++   +    ++A  +   L+        V + +L+    ++   ++A
Sbjct: 537 GCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKA 596

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN----VWSESC 753
           L LF  +K       +  +NAL D L     K  A  + L+   R    N    V + + 
Sbjct: 597 LDLFGSMKESGCPPNTVTFNALLDCLC----KNDAVDLALKMFCRMTIMNCSPDVLTYNT 652

Query: 754 LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSI--LTGWGKHSKVVGDGALRRAV 811
           +   L+  G  RA    W           H++ K LS   +T +     VV DG +  A+
Sbjct: 653 IIYGLIKEG--RAGYAFWFY---------HQMKKFLSPDHVTLYTLLPGVVKDGRVEDAI 701

Query: 812 EVLL 815
           ++++
Sbjct: 702 KIVM 705



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 2/201 (0%)

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
           F++++++P    +P    Y  M++     GR++D   +F  M+   I  +  +Y T+   
Sbjct: 109 FKMVSQLPNIVHTPETCNY--MLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKA 166

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
            +  G   +A     +M  +G   +A +YN L+    + G   E  +++++M ++ + P+
Sbjct: 167 LSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPS 226

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           + TYS L+    +       M +  E +  GL+ ++  Y+  I  L + G ++ A  +L 
Sbjct: 227 MKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILK 286

Query: 534 EMTKEGIRPNVVTYNSIIDAF 554
            M  EG  P+VVTY  +IDA 
Sbjct: 287 TMEDEGCGPDVVTYTVLIDAL 307



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/361 (21%), Positives = 144/361 (39%), Gaps = 34/361 (9%)

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N +L      GR E+   V   M+   I ++  TY  +      +G   +      +M+ 
Sbjct: 126 NYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQ 185

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
                N  +Y+ LI    + G  KEA+++++     GLK  +  YSAL+ AL +     +
Sbjct: 186 AGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGT 245

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE----------S 577
            + LL+EM   G+RPN+ TY   I   GR+      +DD    L   ++          +
Sbjct: 246 IMDLLEEMETLGLRPNIYTYTICIRVLGRAG----RIDDAYGILKTMEDEGCGPDVVTYT 301

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQI------IKVFGQLVAEKAGQGKKENRCRQEILCILG 631
             +DA+C+    D  +   T  +       +  +  L+++    G  E   R        
Sbjct: 302 VLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKR-------- 353

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYGVAHGLLM 687
            + +M      P+VVT++ ++ A  +    + A  +L+ +R+     +   Y      L+
Sbjct: 354 FWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLL 413

Query: 688 GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN 747
             R     +AL LF+ ++ +  +  +  Y    D     G    A     + K+R +  +
Sbjct: 414 NLRR--LDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPS 471

Query: 748 V 748
           +
Sbjct: 472 I 472



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 101/232 (43%), Gaps = 31/232 (13%)

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           T N +L      G+ +++  +F+ M+   ++ N  TY T+    S  G  ++A     + 
Sbjct: 124 TCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKM 183

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           +QAG   +   Y+ LI  L + G  + A+ +   M  EG++P++ TY++++ A GR   T
Sbjct: 184 RQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDT 243

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
              +D +E     + E+  L           +    T    I+V G     +AG+     
Sbjct: 244 GTIMDLLE-----EMETLGL-----------RPNIYTYTICIRVLG-----RAGR----- 277

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                I    G+ + M      P+VVT++ +++A       + A  L  ++R
Sbjct: 278 -----IDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMR 324



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 14/132 (10%)

Query: 150  EFKLCGAD----DYTFLLRELGNRGEWSKAIQCFAFAVKREERKN----DQGKLASAMIS 201
            E KL G D     Y  ++  LG      +A+  F+      E KN     +    +A+I 
Sbjct: 988  ELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFS------EMKNRGISPELYTYNALIL 1041

Query: 202  ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
              G  G VD A  +FE     G    V+ ++ALI  + +SG    A SVF  M      P
Sbjct: 1042 HFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSP 1101

Query: 262  NLVTYNAVIDAC 273
            N  T+  + + C
Sbjct: 1102 NAGTFAQLPNKC 1113


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 197/389 (50%), Gaps = 5/389 (1%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + ++ +L + G+ +L   I+E  ++ G   +V  F  LI    R G    A  +F+ M+
Sbjct: 150 CNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMR 209

Query: 256 RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGG 313
              + P ++ Y  +I   C    ++      +   M   GV P+  T+N+L+   C    
Sbjct: 210 VKGIVPTVIVYTILIRGLCSDNKIE--EAESMHRAMREVGVYPNVYTYNTLMDGYCKLAN 267

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             +A R L+ +M+  G+  D+ T+  L+D +CK  +M  A  +   M   +++PN+  Y+
Sbjct: 268 AKQALR-LYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYN 326

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           ++ID Y K G + +A+ +F E++   +  D  +Y+ ++     + R EEA  + ++M   
Sbjct: 327 SLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKE 386

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI  ++VTYN+L+ G  K+GK D+   +  QM  + V PN++T+STLID Y K    + A
Sbjct: 387 GILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAA 446

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           M I+ E     L  DVV Y+A+ID  CK G ++ A+ L  +M   GI PN  T + ++D 
Sbjct: 447 MGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDG 506

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDA 582
             +       ++     +  Q    N+DA
Sbjct: 507 LCKDGKISDALELFTEKIEFQTPRCNVDA 535



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 188/391 (48%), Gaps = 49/391 (12%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G +  A+ +F+    +G   TV  ++ LI         +EA S+  +M+   + PN+ 
Sbjct: 194 RQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVY 253

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TYN ++D   K   + K  + ++ DML  G+ PD +TF  L+    + G  +AARNLF  
Sbjct: 254 TYNTLMDGYCKLA-NAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVN 312

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+   +  +I  YN+L+DA CK   +  A  +  E+    +SP+V TYS +I G     R
Sbjct: 313 MIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSR 372

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
            ++A N+F +M   GI  + V+YN+++    K G+ ++AL +C +M  +G+  + +T++ 
Sbjct: 373 TEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFST 432

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ GY K         ++ +M    +SP+++TY+ +ID + K G  KEA++++ +    G
Sbjct: 433 LIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNG 492

Query: 505 LKADV------------------------------------------------VLYSALI 516
           +  +                                                 V Y+ALI
Sbjct: 493 ITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALI 552

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
             LC++G    AV L  +M + G++P+ V Y
Sbjct: 553 HGLCQDGQFSKAVKLFSDMRRYGLQPDEVIY 583



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 219/465 (47%), Gaps = 45/465 (9%)

Query: 244 CQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
           CQ A S  + +K     PN+  Y  +I    K     + V E      + G        N
Sbjct: 98  CQLAFSELSRLKSSKFTPNV--YGELIIVLCK----MELVEEALSMYHKVGAALTIQACN 151

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
            LL V  + G +E    ++ EM+  G+   + T+ TL+D  C+   +  A E+  EM  K
Sbjct: 152 VLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVK 211

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
            I P V+ Y+ +I G     ++++A +M   M+ +G+  +  +YNT++  Y KL   ++A
Sbjct: 212 GIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQA 271

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
           L + ++M   G+  D VT+  L+ G  K G+    R +F  M    V+PN+  Y++LID 
Sbjct: 272 LRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDA 331

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y K G   EAM +F E ++  +  DV  YS LI  LC     E A ++ ++MTKEGI  N
Sbjct: 332 YCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILAN 391

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
            VTYNS+ID   +               GK  ++  +   CSQ    + E G   N I  
Sbjct: 392 SVTYNSLIDGCCKE--------------GKMDKALEI---CSQ----MTENGVEPNVI-- 428

Query: 604 VFGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
            F  L+         +  C+ + +   +G++ +M    + P+VVT++A+++   +  S +
Sbjct: 429 TFSTLI---------DGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMK 479

Query: 663 DASMLLEELRLFDNQV----YGVAHGLLMGYRDNIWVQALSLFDE 703
           +A  L  +  + DN +    Y ++  L    +D     AL LF E
Sbjct: 480 EALKLYSD--MLDNGITPNCYTISCLLDGLCKDGKISDALELFTE 522



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 188/369 (50%), Gaps = 20/369 (5%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           +L     A  +++  L EG    V  F  LI    + G  + A ++F +M ++++ PN+ 
Sbjct: 264 KLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIA 323

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFN 323
            YN++IDA  K G D    + +F ++ R  V PD  T++ L+  +CS     EA  N+F 
Sbjct: 324 VYNSLIDAYCKVG-DVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAG-NIFE 381

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           +M   GI  +  TYN+L+D  CK  +MD A EI ++M    + PNV+T+ST+IDGY K  
Sbjct: 382 KMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIR 441

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            L  A+ ++SEM    +  D V+Y  ++  + K G  +EAL +  +M  +GI  +  T +
Sbjct: 442 NLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTIS 501

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSP--------------NLLTYSTLIDVYSKGGL 489
            LL G  K GK  +   +F + K +  +P              N + Y+ LI    + G 
Sbjct: 502 CLLDGLCKDGKISDALELFTE-KIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQ 560

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
           + +A+++F + ++ GL+ D V+Y  ++  L +   +   + L  +M K G+ PN   +  
Sbjct: 561 FSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI--LMMLHADMLKFGVIPNSAVHVI 618

Query: 550 IIDAFGRSA 558
           + + +  S 
Sbjct: 619 LCECYQESG 627



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 130/267 (48%), Gaps = 18/267 (6%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+      G+ S+A+  F   ++R E   D     S +I  L  + + + A NIFE 
Sbjct: 325 YNSLIDAYCKVGDVSEAMALF-LELERFEVSPDVFTY-SILIRGLCSVSRTEEAGNIFEK 382

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              EG       +++LI    + G   +A+ + + M    ++PN++T++ +ID   K   
Sbjct: 383 MTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIR- 441

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           + +  + I+ +M+   + PD +T+ +++   C  G + EA + L+++M+  GI  + +T 
Sbjct: 442 NLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALK-LYSDMLDNGITPNCYTI 500

Query: 338 NTLLDAICKGAQMDLAFEIMAE-----MPAKNISP--------NVVTYSTMIDGYAKAGR 384
           + LLD +CK  ++  A E+  E      P  N+          N V Y+ +I G  + G+
Sbjct: 501 SCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQ 560

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVL 411
              A+ +FS+M+  G+  D V Y  +L
Sbjct: 561 FSKAVKLFSDMRRYGLQPDEVIYVVML 587


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 167/298 (56%), Gaps = 1/298 (0%)

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           ++YN +++   K G    HV   ++DML  G  P+  T+  LL    +   +E AR++F 
Sbjct: 18  LSYNYLLEVLAKSG-RCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
            M  +G   ++F+Y+ L+  +C+G ++D A E++ EM      PNVVTY +++ G  K G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           +L +A+++FS M + G   D V YN ++  ++K G   EA  + +EM   G      TYN
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           +LL G+ ++G++  V+ +F+ M      PN+ T++ L+D + K G   EA ++F E +  
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           G   DVV Y+ L+  +C  G    A  LL EM + G+ P++V+YN +ID + +S   +
Sbjct: 257 GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALD 314



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 184/360 (51%), Gaps = 5/360 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++ +L + G+ D     +   L  G     Y +  L+ +  ++   +EA SVF  M    
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82

Query: 259 LKPNLVTYNAVIDACGKG-GVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWE 316
             PN+ +Y+ +I    +G  VD     E+ ++M+  G QP+ +T+ SLL+ +C  G L E
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVD--EAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKE 140

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           A  +LF+ MV+RG   D   YN L+D   K   M  A+ +  EM  K   P V TY++++
Sbjct: 141 AV-DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+++ G      ++F +M   G   +  ++N +L  + K+G   EA  +  EM S G  
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D V+YN L+ G   +GK  E +R+  +M    V P++++Y+ LID YSK G    A+++
Sbjct: 260 PDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F E  ++GL+ D   YS +ID LC+ G V +A  +  +M   G  P+      ++    R
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCR 379



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 189/392 (48%), Gaps = 7/392 (1%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           + + A+++F     +G    V+++S LI+   R     EA  + N M     +PN+VTY 
Sbjct: 67  RFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYG 126

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           +++    K G   K  V++F  M+  G  PD + +N L+   S+ G    A  LF EM+ 
Sbjct: 127 SLLSGLCKMG-KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLE 185

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           +G    +FTYN+LL    +  +      +  +M  +   PN+ T++ ++DG+ K G + +
Sbjct: 186 KGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVE 245

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +F EM+ LG   D VSYNT++      G+  EA  + +EM  SG+  D V+YN L+ 
Sbjct: 246 AHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILID 305

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           GY K G  D   ++F ++    + P+  +YST+ID   + G    A  +F++    G   
Sbjct: 306 GYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAP 365

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE--CTV- 564
           D  +   L+  LC+   +  +  L   M K    P +  YN ++    ++  ++  C + 
Sbjct: 366 DAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIF 425

Query: 565 -DDVERDLGKQKESAN--LDAMCSQDDKDVQE 593
            +  ER      E +   L+ +   DDK+  E
Sbjct: 426 HELTERGFSPDVEISKVILETLRRSDDKEAAE 457



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 173/335 (51%), Gaps = 1/335 (0%)

Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV 283
           Y +   +++ L+    +SG C      +N M      PN  TY  ++ +  +    F+  
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQ-RFEEA 71

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
             +F  M   G  P+  +++ L+A   RG   + A  L NEM+  G   ++ TY +LL  
Sbjct: 72  RSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSG 131

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +CK  ++  A ++ + M  +   P+ V Y+ +IDG++K G + +A  +F EM   G    
Sbjct: 132 LCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPT 191

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +YN++LS +++ G F     + K+M   G   +  T+N LL G+ K G   E  R+F 
Sbjct: 192 VFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFL 251

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M++    P++++Y+TL+      G   EA ++ RE  ++G+  D+V Y+ LID   K+G
Sbjct: 252 EMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            ++ A+ L  E+ K G+ P+  +Y++IID   R+ 
Sbjct: 312 ALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG 346



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 194/403 (48%), Gaps = 3/403 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y +LLR L     + +A   F     +    N      S +I+ L R  KVD A  +   
Sbjct: 55  YGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSY--SILIAGLCRGQKVDEAAELLNE 112

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            ++ G+   V  + +L+S   + G  +EA+ +F+ M      P+ V YN +ID   K G 
Sbjct: 113 MIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKG- 171

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           D      +F++ML  G  P   T+NSLL+  SR G +   ++LF +M+ +G   +IFT+N
Sbjct: 172 DMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFN 231

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            LLD  CK   M  A  +  EM +    P+VV+Y+T++ G    G+  +A  +  EM   
Sbjct: 232 NLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRS 291

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+G D VSYN ++  Y+K G  + A+ +  E+  SG+  DA +Y+ ++    + GK    
Sbjct: 292 GVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAA 351

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +F+ M A+  +P+      L+    +G    E+ ++F+   +      +  Y+ L+  
Sbjct: 352 FVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYK 411

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           LCK    +    +  E+T+ G  P+V     I++   RS   E
Sbjct: 412 LCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKE 454



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 137/327 (41%), Gaps = 35/327 (10%)

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           ++YN LL    K G+ D V   +  M      PN  TY  L+    +   ++EA  +FR 
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
               G   +V  YS LI  LC+   V+ A  LL+EM   G +PNVVTY S++    +   
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCK--- 134

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
                      +GK KE+ +L +      + V      D  +  V     ++K   G+  
Sbjct: 135 -----------MGKLKEAVDLFS------RMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVY 679
                       +F++M +    P V T++++L+  SR   F     L +++ L    V 
Sbjct: 178 R-----------LFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM-LRQGCVP 225

Query: 680 GV--AHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVV 736
            +   + LL G+ +    V+A  LF E++ +        YN L   +   G+   AQ ++
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLL 285

Query: 737 LEGKRRQVWENVWSESCLDLHLMSSGA 763
            E  R  V  ++ S + L      SGA
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGA 312


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 186/339 (54%), Gaps = 3/339 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI-DACGKGGVDFKHVVEI 286
           V ++S +I+ Y   G  Q+ + +   M+   LKPNL TYN++I   C  G VD      +
Sbjct: 10  VVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVD--DAERV 67

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             +M+  G+ PD + + +L+    + G  +AA  LF+EM  + I  D   Y  ++  +C+
Sbjct: 68  LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +M  A ++  +M ++ + P+ VTY+T+IDGY K+G ++ A ++ ++M   G+  + V+
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y  +     KLG+ + A  +  EM   G++ +  TYN+L+ G  K G   +  ++ E+M+
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + P+ +T++TL+D Y K G   +A ++ RE    GL+  V+ ++ L++  C +G++E
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLE 307

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
               LL  M ++GI PN  TYNS++  +       CT +
Sbjct: 308 DGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTE 346



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 170/301 (56%), Gaps = 1/301 (0%)

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           P++V+Y+ VI+    GG + + V+++  +M   G++P+  T+NS++ +  + G  + A  
Sbjct: 8   PDVVSYSTVINGYCLGG-ELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           +  EM+++GI  D   Y TL+D  CK   +  A+++  EM  + I P+ + Y+ +I G  
Sbjct: 67  VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           + G++ +A  +F++M   G+  D V+Y T++  Y K G  E+A  +  +M  SG+  + V
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY AL  G  K G+ D    +  +M    +  N+ TY++L++   K G  ++A+++  E 
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           + AG+  D + ++ L+DA CK G +  A  LL EM   G++P V+T+N +++ F  S   
Sbjct: 247 EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGML 306

Query: 561 E 561
           E
Sbjct: 307 E 307



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 184/356 (51%), Gaps = 7/356 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I +L + GKVD A+ +    +N+G       ++ LI  + + G  Q A  +F+ M++
Sbjct: 49  NSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEK 108

Query: 257 YNLKPNLVTYNAVIDA---CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
             + P+ + Y AVI     CGK         ++F+ M   GV+PD +T+ +L+    + G
Sbjct: 109 QRIVPDFIAYTAVICGLCRCGK----MMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSG 164

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             E A +L N+MV  G+  ++ TY  L D +CK  Q+D A E++ EM  K +  N+ TY+
Sbjct: 165 EMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYN 224

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           ++++G  K+G +  A+ +  EM+  G+  D +++ T++  Y K G   +A  + +EM   
Sbjct: 225 SLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDR 284

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G++   +T+N L+ G+   G  ++  R+   M    + PN  TY++L+  Y      +  
Sbjct: 285 GLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCT 344

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
            +I++     G+  D   Y+ LI   CK   ++ A  L  EM ++G      +YNS
Sbjct: 345 TEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNS 400



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 151/265 (56%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G  PD +++++++     GG  +    L  EM  +G+  +++TYN+++  +CK  ++D A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             ++ EM  + I P+ V Y+T+IDG+ K G +  A  +F EM+   I  D ++Y  V+  
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
             + G+  EA  V  +M S G+  D VTY  L+ GY K G+ ++   +  QM    ++PN
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           ++TY+ L D   K G    A ++  E    GL+ ++  Y++L++ LCK+G +  AV L++
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSA 558
           EM   G+ P+ +T+ +++DA+ ++ 
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTG 269



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 170/330 (51%), Gaps = 1/330 (0%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           +G    +Y ++++I    +SG   +A  V   M    + P+ V Y  +ID   K G + +
Sbjct: 39  KGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLG-NIQ 97

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
              ++FD+M +  + PD I + +++    R G    A  +FN+M  RG++ D  TY TL+
Sbjct: 98  AAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLI 157

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           D  CK  +M+ AF +  +M    ++PNVVTY+ + DG  K G++D A  +  EM   G+ 
Sbjct: 158 DGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQ 217

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
           L+  +YN++++   K G   +A+ + +EME +G+  D +T+  L+  Y K G+  +   +
Sbjct: 218 LNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHEL 277

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
             +M    + P ++T++ L++ +   G+ ++  ++     + G+  +   Y++L+   C 
Sbjct: 278 LREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCI 337

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
              +     +   M   G+ P+  TYN +I
Sbjct: 338 RNNMRCTTEIYKGMCARGVMPDSNTYNILI 367



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 173/344 (50%), Gaps = 31/344 (9%)

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M  RG   D+ +Y+T+++  C G ++    +++ EM  K + PN+ TY+++I    K+G+
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +DDA  +  EM   GI  D V Y T++  + KLG  + A  +  EME   I  D + Y A
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++ G  + GK  E  ++F +M +  V P+ +TY+TLID Y K G  ++A  +  +  Q+G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           L  +VV Y+AL D LCK G V++A  LL EM  +G++ N+ TYNS+++   +S      V
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
             +E                     +++ AG   + I   F  L+      G        
Sbjct: 241 KLME---------------------EMEVAGMYPDTI--TFTTLMDAYCKTG-------- 269

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
           E++    + ++M    ++P V+TF+ ++N        ED   LL
Sbjct: 270 EMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLL 313



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 176/340 (51%), Gaps = 5/340 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I  L R GK+  A  +F    + G       ++ LI  Y +SG  ++A S+ N M +
Sbjct: 119 TAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQ 178

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
             L PN+VTY A+ D  C  G VD  +  E+  +M   G+Q +  T+NSL+  +C  G +
Sbjct: 179 SGLTPNVVTYTALADGLCKLGQVDTAN--ELLHEMCGKGLQLNICTYNSLVNGLCKSGNI 236

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +A + L  EM   G+  D  T+ TL+DA CK  +M  A E++ EM  + + P V+T++ 
Sbjct: 237 RQAVK-LMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNV 295

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +++G+  +G L+D   + + M   GI  +  +YN+++  Y           + K M + G
Sbjct: 296 LMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARG 355

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  D+ TYN L+ G+ K     E   + ++M     +    +Y+++I  + K     EA 
Sbjct: 356 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEAR 415

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           ++F E ++ G+ AD  +Y+  +D     G +E+A+ L DE
Sbjct: 416 ELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDE 455



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 3/274 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+   L +LG+VD A  +      +G    +  +++L++   +SG  ++A+ +   M+ 
Sbjct: 189 TALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV 248

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + P+ +T+  ++DA C  G +   H  E+  +ML  G+QP  ITFN L+      G+ 
Sbjct: 249 AGMYPDTITFTTLMDAYCKTGEMVKAH--ELLREMLDRGLQPTVITFNVLMNGFCMSGML 306

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E    L   M+ +GI  +  TYN+L+   C    M    EI   M A+ + P+  TY+ +
Sbjct: 307 EDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNIL 366

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G+ KA  + +A  +  EM   G  L   SYN+++  + K  +  EA  + +EM   G+
Sbjct: 367 IKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGM 426

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
             DA  YN  +     +G  +    + ++   +C
Sbjct: 427 AADAEIYNLFVDISYGEGNMETALELCDEAIENC 460


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 256/557 (45%), Gaps = 61/557 (10%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I ++ + G ++ AK +F+  +  G      A+++LI  + R    ++   +   +K+ N+
Sbjct: 357 ICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNI 416

Query: 260 KPNLVTY-NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             +  TY  AV   C  G +D  +   I  +M  +G +P+ + + +L+    +   +  A
Sbjct: 417 VISPYTYGTAVKGMCSSGDLDGAY--NIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDA 474

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +  EM  +GI  D F YN+L+  + K  +MD A   + EM      P+  TY   I G
Sbjct: 475 VRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISG 534

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y +AG    A     EM   G+  ++V    +++ Y K G+  EA    + M   GI  D
Sbjct: 535 YIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGD 594

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           A TY  L+ G  K GK ++   +F +M+   ++P++ +Y TLID +SK G  ++A  IF 
Sbjct: 595 AKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFD 654

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E  QAGL ++V++Y+ L+   C++G +E A  LLDEM+ +G  PN VTY +IID + +S 
Sbjct: 655 EMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSG 714

Query: 559 TTE----------------------------CTVDDVERDL--------GKQKESANLDA 582
                                          C ++DVER +        G    SA  +A
Sbjct: 715 DLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNA 774

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI----LCILG------- 631
           + +     V + G+T+     +  +L+     +  K N     I    LC  G       
Sbjct: 775 LINW----VFKFGKTE-LTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKE 829

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYGVAHGLLM 687
           +F  M K  + P V+T++++LN   +     +   + +E+       DN +Y V     +
Sbjct: 830 LFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFL 889

Query: 688 GYRDNIWVQALSLFDEV 704
             ++ +  +AL L D++
Sbjct: 890 --KEGMTTKALVLLDQM 904



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 140/539 (25%), Positives = 234/539 (43%), Gaps = 76/539 (14%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           +++ LI    +    ++A S+   M    L  + V Y+ +ID   KG  +      +  +
Sbjct: 282 SYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGR-NADAANGLVHE 340

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M+ +G   D + ++  + V S+ G  E A+ LF+ M+  G+      Y +L++   +   
Sbjct: 341 MVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKN 400

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +   +E++ E+  +NI  +  TY T + G   +G LD A N+  EM   G   + V Y T
Sbjct: 401 VRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTT 460

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++  + +  RF +A+ V KEM   GI  D   YN+L+ G  K  K DE R    +M  + 
Sbjct: 461 LIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENG 520

Query: 470 VSPNLLTY-----------------------------------STLIDVYSKGGLYKEAM 494
             P+  TY                                   + LI+ Y K G   EA 
Sbjct: 521 FKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEAC 580

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             FR   + G+  D   Y+ L++ L KNG V  A  +  EM  +GI P+V +Y ++ID F
Sbjct: 581 SAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGF 640

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            +                 QK S+  D M         +AG T N II  +  L+     
Sbjct: 641 SKLGNM-------------QKASSIFDEMV--------QAGLTSNVII--YNMLLGGFCR 677

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
            G+ E    +E+L       +M      PN VT+  I++   +     +A  L +E++L 
Sbjct: 678 SGEIEK--AKELL------DEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLK 729

Query: 675 ----DNQVYGVAHGLLMG-YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
               D+ VY     L+ G  R N   +A+++F E      +++SA +NAL + ++ FG+
Sbjct: 730 GLVPDSFVYTT---LVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGK 784



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 198/403 (49%), Gaps = 15/403 (3%)

Query: 160 TFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETA 219
           T L+ E   +G+  +A  C AF    E+      K  + +++ L + GKV+ A+ IF   
Sbjct: 564 TGLINEYCKKGKVIEA--CSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM 621

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
             +G    V+++  LI  + + G  Q+A S+F+ M +  L  N++ YN ++    + G +
Sbjct: 622 RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSG-E 680

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            +   E+ D+M   G  P+ +T+ +++   C  G L EA + LF+EM  +G+  D F Y 
Sbjct: 681 IEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQ-LFDEMKLKGLVPDSFVYT 739

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD---DALNMFSEM 395
           TL+D  C+   ++ A  I  E   K  + +   ++ +I+   K G+ +   D +N   + 
Sbjct: 740 TLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDG 798

Query: 396 KFLGIGL-DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
            F   G  + V+YN ++    K G  E A  +   M+ + +    +TY +LL GY K G+
Sbjct: 799 SFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGR 858

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF--KQA---GLKADV 509
             E+  +F+++ A  + P+ + YS +I+ + K G+  +A+ +  +   K A   G K  +
Sbjct: 859 RSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSI 918

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
               AL+    K G +E A  +++ M +    P+  T   +I+
Sbjct: 919 STCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELIN 961



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 160/717 (22%), Positives = 292/717 (40%), Gaps = 130/717 (18%)

Query: 85  LPSSKSELAPDFS--GRRSTRFVSKMHFG-RPKIAMSTRHSVVAEEALHHVTAFARDDVS 141
           LP + +E+A   +    R T   S +     P++ +S   S   ++    ++ F     +
Sbjct: 31  LPDASAEIAGILNQGNWRETLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFF-----N 85

Query: 142 LGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           L D  K  E KL   D ++FL  +L N G   KA    +  ++  ERK    ++ S+++ 
Sbjct: 86  LVDSQKVTEQKL---DSFSFLALDLCNFGSIEKA---HSVVIRMIERKWPVAEVWSSIVR 139

Query: 202 ILGR-LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
            L   +GK D               + V  F  LI  Y   G+  EA+ VF+S K  +L 
Sbjct: 140 CLREFVGKSD---------------DRVLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLD 184

Query: 261 --PNLVTYNAVIDACGKGGVDFKHVVEIFDD----MLRNGVQPDRITFNSLLAVCSRGGL 314
             P+L   N ++DA  K     ++ +++F D    M+   V  D  ++  L+    R G 
Sbjct: 185 LVPSLARCNHLLDALLK-----RNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGN 239

Query: 315 WEAARNLF---------------------NEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
            + A+++                        M  +G+     +YN L+D +CK  +++ A
Sbjct: 240 VQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDA 299

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             ++ EM +  +  + V YS +IDG  K    D A  +  EM   G  +D + Y+  + +
Sbjct: 300 KSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICV 359

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ--------------------- 452
            +K G  E+A  +   M + G+   A  Y +L+ G+ ++                     
Sbjct: 360 MSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVIS 419

Query: 453 --------------GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
                         G  D    + ++M A    PN++ Y+TLI  + +   + +A+++ +
Sbjct: 420 PYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLK 479

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E ++ G+  D   Y++LI  L K   ++ A S L EM + G +P+  TY + I  +  + 
Sbjct: 480 EMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAG 539

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
                            E A+ D       K++ E G   N+++     L+ E   +GK 
Sbjct: 540 -----------------EFASADKYV----KEMLECGVIPNKVLCT--GLINEYCKKGKV 576

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
              C          F+ M +  I  +  T++ ++N   +     DA  +  E+R      
Sbjct: 577 IEAC--------SAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAP 628

Query: 679 YGVAHGLLM-GYRDNIWVQ-ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
              ++G L+ G+     +Q A S+FDE+     ++    YN L       G+   A+
Sbjct: 629 DVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAK 685


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 147/537 (27%), Positives = 242/537 (45%), Gaps = 81/537 (15%)

Query: 202 ILGRLGKVDLAKNIFE-TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           +L  LGK+     +F+     +GY ++V+ ++  + A  ++   Q A   F  M+R    
Sbjct: 11  VLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYP 70

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           P+  TY+ V+    K G +     E+   +  +GV+ + IT++ ++  C +    + A  
Sbjct: 71  PDDFTYSIVLRGLCKAG-ELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALE 129

Query: 321 LFNEM-VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           +F  M    G   D+ T+N+LL  +C G +M  AF +   M      PNV++YST++DG 
Sbjct: 130 IFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGL 189

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            KAGRLD+A  ++ EM       D V+Y + ++   K  R  EA   C++M + G + DA
Sbjct: 190 CKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADA 249

Query: 440 VTYNALLGGYGKQGK-----------------YDEVRRMFEQM----------------K 466
           V ++ ++G   K+G                   DE  + FE+M                 
Sbjct: 250 VAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIH 309

Query: 467 ADCVS----------------------PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           A C S                      PNL TY+ ++D   K     EA ++  E    G
Sbjct: 310 AVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYG 369

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           L  DVV YSAL+D LCK G ++ A  LL+EM+KEG+ P+  T  SI++A  ++   +  +
Sbjct: 370 LSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYAL 429

Query: 565 DDVE--RDLGKQKESAN----LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
             +E  +  G   +       LD +C        +AGR D + I    ++VA K      
Sbjct: 430 SHLETMKARGSTPDLVTYNTLLDGLC--------KAGRID-EAITFLAKMVAAKCTPDVF 480

Query: 619 ENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
                   LC  G       +FQ+M K  + P+ V + ++L+  +R N  ED ++ L
Sbjct: 481 SYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLAR-NGLEDLALEL 536



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 182/382 (47%), Gaps = 27/382 (7%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +FE     G    V ++S L+    ++G   EA  ++  M   +  P+LV Y + +    
Sbjct: 166 LFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLC 225

Query: 275 KGGVDFKHVVEIFD---DMLRNGVQPDRITFNSLLAV-CSRG----------------GL 314
           K       V E  D    M+  G + D + F++++ + C +G                G+
Sbjct: 226 KA----NRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGM 281

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD---LAFEIMAEMPAKNISPNVVT 371
            + A   F EM+ R        +NTL+ A+CK  ++    L F+ M  M      PN+ T
Sbjct: 282 LDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLET 341

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+ M+D   KA +LD+A  + +EM   G+  D V+Y+ ++    KLG+ + A  + +EM 
Sbjct: 342 YNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMS 401

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G+  D+ T  ++L    K GK D      E MKA   +P+L+TY+TL+D   K G   
Sbjct: 402 KEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRID 461

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA+    +   A    DV  Y+ +I ALC++G    A ++  EM K G+ P+ V Y+S++
Sbjct: 462 EAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLL 521

Query: 552 DAFGRSATTECTVDDVERDLGK 573
           D   R+   +  ++ ++  L K
Sbjct: 522 DGLARNGLEDLALELLKTSLCK 543



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 205/438 (46%), Gaps = 28/438 (6%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDL 211
           C  D  TF  LL+ L +    S+A   F +  K     N      S ++  L + G++D 
Sbjct: 140 CVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISY--STLLDGLCKAGRLDE 197

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  ++E  + +     + A+++ ++   ++    EA      M     K + V ++ VI 
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257

Query: 272 A-CGKGGVD---------------FKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
             C KG  +                    + F++M+     P    FN+L+ AVC    L
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRL 317

Query: 315 WEAARNLFNEMVHRG---IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            +    LF  M          ++ TYN ++D +CK  Q+D A E++ EM    +SP+VVT
Sbjct: 318 PDGVL-LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVT 376

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           YS ++DG  K G+LD A ++  EM   G+  D  +  ++L+  +K G+ + AL   + M+
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMK 436

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           + G   D VTYN LL G  K G+ DE      +M A   +P++ +Y+ +I    + G   
Sbjct: 437 ARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAA 496

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            A  IF+E  + G+  D VLY +L+D L +NGL + A+ LL        +P+ V +  ++
Sbjct: 497 GAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVV 553

Query: 552 DAFGRSATTECTVDDVER 569
           D   ++   E   + VER
Sbjct: 554 DGLCKAGKAEDACEVVER 571



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 185/391 (47%), Gaps = 43/391 (10%)

Query: 164 RELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEG 223
           R++  +G  + A+  F+  +    +K    +  + MI  L R G +D A   FE  ++  
Sbjct: 238 RKMVTKGSKADAVA-FSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRN 296

Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFN---SMKRYNLKPNLVTYNAVIDACGKGGVDF 280
           +  +   F+ LI A  +S    + + +F    SMK +   PNL TYN ++D         
Sbjct: 297 HPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDN-------- 348

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
                                      +C    L EA + L NEM + G+  D+ TY+ L
Sbjct: 349 ---------------------------LCKAKQLDEA-QELVNEMANYGLSPDVVTYSAL 380

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +D +CK  ++D A +++ EM  + + P+  T +++++  +KAG++D AL+    MK  G 
Sbjct: 381 VDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGS 440

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D V+YNT+L    K GR +EA+    +M ++    D  +Y  ++    + G+      
Sbjct: 441 TPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHA 500

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F++M    V P+ + Y +L+D  ++ GL   A+++    K +  K D V++  ++D LC
Sbjct: 501 IFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL---KTSLCKPDFVMHKMVVDGLC 557

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           K G  E A  +++ M   G   +  TY +++
Sbjct: 558 KAGKAEDACEVVERMADAGFPADAFTYINVV 588



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 113/228 (49%), Gaps = 6/228 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA++  L +LGK+D A ++ E    EG     +  +++++A  ++G    A+S   +MK 
Sbjct: 378 SALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKA 437

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               P+LVTYN ++D  C  G +D    +     M+     PD  ++  ++    R G  
Sbjct: 438 RGSTPDLVTYNTLLDGLCKAGRID--EAITFLAKMVAAKCTPDVFSYTIIITALCRSGQA 495

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  +F EMV RG+  D   Y++LLD + +    DLA E++     K   P+ V +  +
Sbjct: 496 AGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK---PDFVMHKMV 552

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
           +DG  KAG+ +DA  +   M   G   D  +Y  V+    KLG+ ++A
Sbjct: 553 VDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKA 600


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 193/369 (52%), Gaps = 7/369 (1%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS---GYCQEAISVFN 252
           AS ++  L + G+VD A+ + +     G       +++L+  Y R    G  QE + +  
Sbjct: 180 ASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI-- 237

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            M+   ++  + TY  ++D+      D   V  +F++M  N V  D   + +++    R 
Sbjct: 238 -MENEGIEATVGTYTILVDSLSTAR-DISKVEALFNEMKANNVVGDVYLYTAVINAYCRA 295

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G    A  + +E V  G++ +  TY  L++  CK  QM+ A  ++A+M  + +  N + +
Sbjct: 296 GNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIF 355

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +TMIDGY + G +DDAL + + M+ +G+ LD  +YNT+     ++ R +EA  +   M  
Sbjct: 356 NTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIE 415

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G+  + VTY  L+  + K G   E RR+F +M     +P+++TY+ +ID Y+K G  +E
Sbjct: 416 MGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIRE 475

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A +  +E ++ G   DV  Y++L+   C NG V+ A+ L +EM + G  PNVV Y ++I 
Sbjct: 476 AERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALIS 535

Query: 553 AFGRSATTE 561
              +   +E
Sbjct: 536 GLAKEGRSE 544



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 183/342 (53%), Gaps = 1/342 (0%)

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
           + I E   NEG   TV  ++ L+ +   +    +  ++FN MK  N+  ++  Y AVI+A
Sbjct: 232 QEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINA 291

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
             + G + +   ++ D+ + NGV+P+  T+  L+    + G  EAA  L  +M  +G+  
Sbjct: 292 YCRAG-NMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGL 350

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           +   +NT++D  C+   +D A +I A M    +  ++ TY+T+  G  +  RLD+A  + 
Sbjct: 351 NQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLL 410

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
             M  +G+  + V+Y T++SI+ K G   EA  + +EM   G     VTYN ++ GY K+
Sbjct: 411 HIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKK 470

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G   E  R  ++M+     P++ TY++L+  +   G    A+++F E KQ G + +VV Y
Sbjct: 471 GSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAY 530

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +ALI  L K G  E+A  L D+M K G+ P+   Y++++ + 
Sbjct: 531 TALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 572



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 143/292 (48%), Gaps = 10/292 (3%)

Query: 167 GNRGEWSKAI-QCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYG 225
           GN    +K + +C    V+  ER          +I+   ++G+++ A+ +      +G G
Sbjct: 296 GNMRRAAKVLDECVGNGVEPNERTY------GVLINGFCKIGQMEAAEMLLADMQGQGVG 349

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD-FKHVV 284
                F+ +I  Y R G   +A+ +  +M++  ++ ++ TYN +  ACG   V+      
Sbjct: 350 LNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTL--ACGLCRVNRLDEAK 407

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
            +   M+  GV P+ +T+ +L+++  + G    AR LF EM  +G    + TYN ++D  
Sbjct: 408 TLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGY 467

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
            K   +  A     EM  K   P+V TY++++ G+   G++D AL +F EMK  G   + 
Sbjct: 468 TKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNV 527

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
           V+Y  ++S  AK GR E A  +  +M  +G+  D   Y+AL+G      + D
Sbjct: 528 VAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKD 579



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 76/353 (21%), Positives = 143/353 (40%), Gaps = 60/353 (16%)

Query: 453 GKYDEVRRMFEQMKADC---VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
           G+  +   + E+    C   VSP  L  S ++D   K G   +A ++  +  + G+  + 
Sbjct: 155 GRLADAAGLLERALGSCPGSVSP--LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNA 212

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           + Y++L+D   +         +L+ M  EGI   V TY  ++D    S +T   +  VE 
Sbjct: 213 LCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVD----SLSTARDISKVEA 268

Query: 570 DLGKQKE----------SANLDAMCSQDD-------------KDVQEAGRTDNQIIKVF- 605
              + K           +A ++A C   +               V+   RT   +I  F 
Sbjct: 269 LFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFC 328

Query: 606 --GQ------LVAEKAGQGKKENR----------CRQEIL-CILGVFQKMHKLKIKPNVV 646
             GQ      L+A+  GQG   N+          CR+ ++   L +   M K+ ++ ++ 
Sbjct: 329 KIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIY 388

Query: 647 TFSAILNACSRCNSFEDASMLLE---ELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLF 701
           T++ +     R N  ++A  LL    E+ +  N    V +  L+    +D   V+A  LF
Sbjct: 389 TYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNY---VTYTTLISIHCKDGDMVEARRLF 445

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
            E+    ++ +   YN + D     G  R A+    E +++    +V++ + L
Sbjct: 446 REMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASL 498


>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Glycine max]
          Length = 696

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 186/363 (51%), Gaps = 1/363 (0%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G L + +I    + G    A      A + G         A+I A G SG   EA ++F 
Sbjct: 257 GHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFE 316

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            ++    +P    YNA++    K G   K    +  +M + GV+PD  T++ L+   +  
Sbjct: 317 EIRENGSEPRTRAYNALLKGYVKTG-SLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHA 375

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G WE+AR +  EM    ++ + + Y+ +L +     +   +F+++ +M +  + P+   Y
Sbjct: 376 GRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFY 435

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + MID + K   LD A+  F  M   GI  D V++NT+++ + K GR   A  +  EM+ 
Sbjct: 436 NVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQ 495

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G      TYN ++   G+Q ++++V     +M++  + PN +TY+TL+DVY K G + +
Sbjct: 496 RGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSD 555

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A++     K  G K    +Y+ALI+A  + GL E AV+    MT EG+ P+++  NS+I+
Sbjct: 556 AIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLIN 615

Query: 553 AFG 555
           AFG
Sbjct: 616 AFG 618



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 198/387 (51%), Gaps = 3/387 (0%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
           G+ ++A++  A A  +    N +     A+I  LG  G+   A+ +FE     G      
Sbjct: 271 GDPTRAMRFLAMA--QSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTR 328

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           A++AL+  Y ++G  ++A  V + M++  +KP+  TY+ +IDA    G  ++    +  +
Sbjct: 329 AYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAG-RWESARIVLKE 387

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M  + V+P+   ++ +LA     G W+ +  +  +M   G+  D   YN ++D   K   
Sbjct: 388 MEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNC 447

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A      M ++ I P+ VT++T+I+ + K+GR + A  +F EM+  G      +YN 
Sbjct: 448 LDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNI 507

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +++   +  R+E+  L   +M+S G+  +++TY  L+  YGK G++ +     E +K+  
Sbjct: 508 MINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTG 567

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P    Y+ LI+ Y++ GL + A+  FR     GL   ++  ++LI+A  ++     A 
Sbjct: 568 FKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAF 627

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           ++L  M +  I P+VVTY +++ A  R
Sbjct: 628 AVLQYMKENNIEPDVVTYTTLMKALIR 654



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 126/523 (24%), Positives = 238/523 (45%), Gaps = 57/523 (10%)

Query: 195 LASAMISILGRLGKVDLAKNIFET-ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           L S +I+ LGR      ++ ++E   L++    T   ++ALI A  R+G  ++A+++ + 
Sbjct: 157 LYSILINALGR------SEKLYEAFLLSQRQVLTPLTYNALIGACARNGDVEKALNLMSK 210

Query: 254 MKRYNLKPNLVTYNAVIDACGKGG-----VDFKHVVEIFDDMLR---------------- 292
           M+R   +P+ V Y+++I    +       +  K   EI  D +                 
Sbjct: 211 MRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKA 270

Query: 293 ---------------NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
                          NG+ P   T  +++      G    A  LF E+   G +     Y
Sbjct: 271 GDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAY 330

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N LL    K   +  A  +++EM    + P+  TYS +ID YA AGR + A  +  EM+ 
Sbjct: 331 NALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEA 390

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             +  +   Y+ +L+ Y   G ++++  V K+M+S+G++ D   YN ++  +GK    D 
Sbjct: 391 SNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDH 450

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
               FE+M ++ + P+ +T++TLI+ + K G +  A ++F E +Q G    +  Y+ +I+
Sbjct: 451 AMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMIN 510

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA----TTECTVDDVERDLGK 573
           ++ +    E     L +M  +G+ PN +TY +++D +G+S       EC   +V +  G 
Sbjct: 511 SMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECL--EVLKSTGF 568

Query: 574 QKESANLDAMC-SQDDKDVQEAGRTDNQIIKVFG----QLVAEKAGQGKKENRCRQEILC 628
           +  S   +A+  +   + + E      +++   G     L          E+R   E   
Sbjct: 569 KPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFA 628

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +L   Q M +  I+P+VVT++ ++ A  R   F+    + EE+
Sbjct: 629 VL---QYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEM 668



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 162/323 (50%), Gaps = 5/323 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I      G+ + A+ + +           Y +S ++++Y   G  Q++  V   MK 
Sbjct: 366 SLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKS 425

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P+   YN +ID  GK      H +  F+ ML  G++PD +T+N+L+    + G   
Sbjct: 426 NGVQPDRHFYNVMIDTFGKYNC-LDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHN 484

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF EM  RG    I TYN +++++ +  + +     +++M ++ + PN +TY+T++
Sbjct: 485 MAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLV 544

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y K+GR  DA+     +K  G       YN +++ YA+ G  E A+   + M + G+ 
Sbjct: 545 DVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLT 604

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              +  N+L+  +G+  +  E   + + MK + + P+++TY+TL+    +   +++   +
Sbjct: 605 PSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAV 664

Query: 497 FREFKQAGL----KADVVLYSAL 515
           + E   +G     KA  +L SAL
Sbjct: 665 YEEMVTSGCTPDRKARAMLRSAL 687



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 112/502 (22%), Positives = 213/502 (42%), Gaps = 75/502 (14%)

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           Y+ +I+A G+     + + E F    R  + P  +T+N+L+  C+R G  E A NL ++M
Sbjct: 158 YSILINALGRS----EKLYEAFLLSQRQVLTP--LTYNALIGACARNGDVEKALNLMSKM 211

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMD---------------------------------- 351
              G   D   Y++++  + +  ++D                                  
Sbjct: 212 RRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAG 271

Query: 352 ---LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
               A   +A   +  ++P   T   +I     +GR  +A  +F E++  G      +YN
Sbjct: 272 DPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYN 331

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +L  Y K G  ++A  V  EME +G++ D  TY+ L+  Y   G+++  R + ++M+A 
Sbjct: 332 ALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEAS 391

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V PN   YS ++  Y   G ++++ Q+ ++ K  G++ D   Y+ +ID   K   ++ A
Sbjct: 392 NVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHA 451

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           ++  + M  EGIRP+ VT+N++I+   +S              G+   +  L     Q  
Sbjct: 452 MATFERMLSEGIRPDTVTWNTLINCHCKS--------------GRHNMAEELFGEMQQ-- 495

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
           +       T N +I   G+           + R  Q  L +     KM    + PN +T+
Sbjct: 496 RGYSPCITTYNIMINSMGE-----------QQRWEQVSLFL----SKMQSQGLLPNSITY 540

Query: 649 SAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMD 708
           + +++   +   F DA   LE L+    +     +  L+       +  L++ +  +LM 
Sbjct: 541 TTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAV-NAFRLMT 599

Query: 709 SSTASAFYNALTDMLWHFGQKR 730
           +   +    AL  ++  FG+ R
Sbjct: 600 TEGLTPSLLALNSLINAFGEDR 621



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 137/296 (46%), Gaps = 5/296 (1%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +LK+ E      + Y +  +L    ++GEW K+ Q     +K    + D+    + MI  
Sbjct: 384 VLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLK-DMKSNGVQPDR-HFYNVMIDT 441

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
            G+   +D A   FE  L+EG       ++ LI+ + +SG    A  +F  M++    P 
Sbjct: 442 FGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPC 501

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           + TYN +I++ G+    ++ V      M   G+ P+ IT+ +L+ V  + G +  A    
Sbjct: 502 ITTYNIMINSMGEQQ-RWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECL 560

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
             +   G       YN L++A  +    +LA      M  + ++P+++  +++I+ + + 
Sbjct: 561 EVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGED 620

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
            R  +A  +   MK   I  D V+Y T++    ++ +F++   V +EM +SG   D
Sbjct: 621 RRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVTSGCTPD 676



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 3/141 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+   G  G +S AI+C    V +         + +A+I+   + G  +LA N F  
Sbjct: 540 YTTLVDVYGKSGRFSDAIEC--LEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRL 597

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              EG   ++ A ++LI+A+G      EA +V   MK  N++P++VTY  ++ A  +   
Sbjct: 598 MTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVE- 656

Query: 279 DFKHVVEIFDDMLRNGVQPDR 299
            F+ V  ++++M+ +G  PDR
Sbjct: 657 KFQKVPAVYEEMVTSGCTPDR 677



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 118/296 (39%), Gaps = 49/296 (16%)

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
           C S  LL YS LI+   +     EA  + +      L      Y+ALI A  +NG VE A
Sbjct: 151 CFSYELL-YSILINALGRSEKLYEAFLLSQRQVLTPLT-----YNALIGACARNGDVEKA 204

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT----------TECTVDDVERD-------- 570
           ++L+ +M ++G +P+ V Y+SII    RS            TE   D +E D        
Sbjct: 205 LNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDII 264

Query: 571 LGKQKESANLDAM---CSQDDKDVQEAGRTDNQIIKVFG--------QLVAEKAGQGKKE 619
           LG  K      AM          +     T   +I   G        + + E+  +   E
Sbjct: 265 LGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSE 324

Query: 620 NRCRQEILCILG------------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
            R R     + G            V  +M K  +KP+  T+S +++A +    +E A ++
Sbjct: 325 PRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIV 384

Query: 668 LEELRLFDNQVYGVAHG-LLMGYRDN-IWVQALSLFDEVKLMDSSTASAFYNALTD 721
           L+E+   + +     +  +L  YRD   W ++  +  ++K         FYN + D
Sbjct: 385 LKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMID 440


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 202/376 (53%), Gaps = 4/376 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+ L   G+VD A ++ E  + +G   TVY ++  I+A     + +EAI +   MK+
Sbjct: 272 STLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKK 331

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +PN+ TY A+I    + G   +  + ++  ML+ G+ P+ +T+N+L+     GG + 
Sbjct: 332 RGCRPNVQTYTALISGLSRLG-KLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFS 390

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +F+ M   G   +  TYN ++  +C G  ++ A  +  +M      P VVTY+T+I
Sbjct: 391 TALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 450

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY   G +++A  +   MK  G   D  +YN ++S ++K G+ E A    +EM   G+ 
Sbjct: 451 NGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLN 510

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + V+Y AL+ G+ K GK D    + ++M+    +PN+ +Y+ +I+  SK   + EA +I
Sbjct: 511 PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 570

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF-- 554
             +  + GL  +V+ Y+ LID LC+NG  + A  +  +M K    PN+ TY+S+I     
Sbjct: 571 CDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 630

Query: 555 -GRSATTECTVDDVER 569
            G++   E  + ++ER
Sbjct: 631 EGKADEAEILLKEMER 646



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 247/506 (48%), Gaps = 71/506 (14%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L +   V+ A+N+++  LN G   ++  F+ LI+   + G  +EA  + + + +Y+L P+
Sbjct: 173 LAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPD 232

Query: 263 LVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARN 320
           + TY ++I   C    +D      +FD M++ G  P+ +T+++L+  +C+ G + EA  +
Sbjct: 233 VFTYTSLILGHCRNRNLDL--AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL-D 289

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           +  EM+ +GI+  ++TY   + A+C     + A E++A M  +   PNV TY+ +I G +
Sbjct: 290 MLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLS 349

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF-------------------- 420
           + G+L+ A+ ++ +M   G+  + V+YN +++     GRF                    
Sbjct: 350 RLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 409

Query: 421 ---------------EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
                          E+A+++ ++M   G     VTYN L+ GY  +G  +   R+ + M
Sbjct: 410 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 469

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           K +   P+  TY+ L+  +SK G  + A   F+E  + GL  + V Y+ALID   K+G V
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           + A+SLL  M + G  PNV +YN++I+                  L K+   +  + +C 
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVING-----------------LSKENRFSEAEKIC- 571

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
             DK V E G   N I   +  L+      G+ +   +        +F  M K K  PN+
Sbjct: 572 --DKMV-EQGLLPNVI--TYTTLIDGLCRNGRTQFAFK--------IFHDMEKRKCLPNL 618

Query: 646 VTFSAILNACSRCNSFEDASMLLEEL 671
            T+S+++    +    ++A +LL+E+
Sbjct: 619 YTYSSLIYGLCQEGKADEAEILLKEM 644



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 197/376 (52%), Gaps = 5/376 (1%)

Query: 184 KREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGY 243
           KR  R N Q    +A+IS L RLGK+++A  ++   L EG       ++ALI+     G 
Sbjct: 331 KRGCRPNVQT--YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388

Query: 244 CQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
              A+ +F+ M+ +    N  TYN +I     GG D +  + +F+ ML+ G  P  +T+N
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGG-DIEKAMVLFEKMLKMGPLPTVVTYN 447

Query: 304 SLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           +L+    ++G +  AAR L + M   G + D +TYN L+    K  +++ A     EM  
Sbjct: 448 TLINGYLTKGNVNNAAR-LLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE 506

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
             ++PN V+Y+ +IDG++K G++D AL++   M+ +G   +  SYN V++  +K  RF E
Sbjct: 507 CGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSE 566

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A  +C +M   G+  + +TY  L+ G  + G+     ++F  M+     PNL TYS+LI 
Sbjct: 567 AEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 626

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
              + G   EA  + +E ++ GL  D V +++LID     G ++ A  LL  M   G +P
Sbjct: 627 GLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKP 686

Query: 543 NVVTYNSIIDAFGRSA 558
           N  TY+ ++    +  
Sbjct: 687 NYRTYSVLLKGLQKEC 702



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 234/484 (48%), Gaps = 39/484 (8%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           ++  ML +G+QP  +TFN+L+ + S+ G    A  + +++    +  D+FTY +L+   C
Sbjct: 185 LYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHC 244

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           +   +DLAF +   M  +   PN VTYST+I+G    GR+D+AL+M  EM   GI     
Sbjct: 245 RNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVY 304

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y   ++    +   EEA+ +   M+  G R +  TY AL+ G  + GK +    ++ +M
Sbjct: 305 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 364

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             + + PN +TY+ LI+    GG +  A++IF   +  G  A+   Y+ +I  LC  G +
Sbjct: 365 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 424

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           E A+ L ++M K G  P VVTYN++I+ +     T+  V++  R L   KE+      C 
Sbjct: 425 EKAMVLFEKMLKMGPLPTVVTYNTLINGY----LTKGNVNNAARLLDLMKENG-----CE 475

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
            D+                + +LV+  +  GK E+            FQ+M +  + PN 
Sbjct: 476 PDE--------------WTYNELVSGFSKWGKLESASF--------YFQEMVECGLNPNP 513

Query: 646 VTFSAILNACSRCNSFEDASMLL---EELRLFDN--QVYGVAHGLLMGYRDNIWVQALSL 700
           V+++A+++  S+    + A  LL   EE+    N      V +GL    ++N + +A  +
Sbjct: 514 VSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL---SKENRFSEAEKI 570

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMS 760
            D++           Y  L D L   G+ + A  +  + ++R+   N+++ S L   L  
Sbjct: 571 CDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 630

Query: 761 SGAA 764
            G A
Sbjct: 631 EGKA 634



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 164/336 (48%), Gaps = 8/336 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+ EL   G +S A++ F +        N Q    + +I  L   G ++ A  +FE 
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQT--YNEIIKGLCLGGDIEKAMVLFEK 433

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L  G   TV  ++ LI+ Y   G    A  + + MK    +P+  TYN ++    K G 
Sbjct: 434 MLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG- 492

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +     F +M+  G+ P+ +++ +L+   S+ G  + A +L   M   G + ++ +YN
Sbjct: 493 KLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYN 552

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            +++ + K  +   A +I  +M  + + PNV+TY+T+IDG  + GR   A  +F +M+  
Sbjct: 553 AVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 612

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
               +  +Y++++    + G+ +EA ++ KEME  G+  D VT+ +L+ G+   G+ D  
Sbjct: 613 KCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHA 672

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
             +  +M      PN  TYS L+      GL KE +
Sbjct: 673 FLLLRRMVDMGCKPNYRTYSVLLK-----GLQKECL 703



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 145/294 (49%), Gaps = 39/294 (13%)

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           +I AC +   + + V +  +++   G      + N+LL   ++  + E ARNL+ +M++ 
Sbjct: 134 MIKAC-RNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           GI   + T+NTL++ + K  ++  A  I++++   ++SP+V TY+++I G+ +   LD A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             +F          DR                         M   G   ++VTY+ L+ G
Sbjct: 253 FGVF----------DR-------------------------MVKEGCDPNSVTYSTLING 277

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
              +G+ DE   M E+M    + P + TY+  I         +EA+++    K+ G + +
Sbjct: 278 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 337

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSAT 559
           V  Y+ALI  L + G +E A+ L  +M KEG+ PN VTYN++I+     GR +T
Sbjct: 338 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFST 391



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 184/409 (44%), Gaps = 33/409 (8%)

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT----Y 337
           HV EI        V  D  +        S+   ++   N F  M++R +   +F      
Sbjct: 77  HVAEIV------AVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHI 130

Query: 338 NTLLDAICKGAQ-MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
             L+   C+  + +    + + E+       ++ + +T++   AK   ++ A N++ +M 
Sbjct: 131 RILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQML 190

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             GI    +++NT+++I +K G+  EA L+  ++    +  D  TY +L+ G+ +    D
Sbjct: 191 NSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLD 250

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
               +F++M  +   PN +TYSTLI+     G   EA+ +  E  + G++  V  Y+  I
Sbjct: 251 LAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 310

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL--GKQ 574
            ALC     E A+ L+  M K G RPNV TY ++I    R    E  +    + L  G  
Sbjct: 311 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 370

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN-RCRQEI---LCIL 630
             +   +A+ ++    +   GR     +K+F  +     G G   N +   EI   LC+ 
Sbjct: 371 PNTVTYNALINE----LCVGGRFSTA-LKIFHWM----EGHGSLANTQTYNEIIKGLCLG 421

Query: 631 G-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           G       +F+KM K+   P VVT++ ++N      +  +A+ LL+ ++
Sbjct: 422 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 470


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 194/366 (53%), Gaps = 2/366 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGN-TVYAFSALISAYGRSGYCQEAISVFNSMK 255
           + +I +L R G+V+ AK + +  + +G     V+ ++ L++AY      +    +   M+
Sbjct: 220 TLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLME 279

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           +  +  ++ TY+ +I      G D +   +IF++M    ++ D   ++S+++   R G  
Sbjct: 280 KEQVVFSVATYSILIQWYSSSG-DIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNM 338

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  LF+EM  R I  +  TY  L+  +CK  QM+ A  ++ EM +K +  N+V ++T 
Sbjct: 339 KRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTT 398

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +DGY + G++D+AL + + M+  GI  D  +YN + +   KL R++EA  +   M   G+
Sbjct: 399 MDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGV 458

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + VT+   +  Y K+G   E  R+F  M+     PN++TY+TLID Y K    K+A +
Sbjct: 459 KPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHK 518

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I  E    GL  D+  YS+LI   C  G V+ A+ L +EM  +GI  NV TY S+I    
Sbjct: 519 IKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLS 578

Query: 556 RSATTE 561
           +    +
Sbjct: 579 KEGRAD 584



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 207/412 (50%), Gaps = 5/412 (1%)

Query: 148 KFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLG 207
           KFE ++      T ++  L  RGE  KA +     V +   K +     + + + +GR  
Sbjct: 211 KFEIRV---QSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKD 267

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           +  + + I +    E    +V  +S LI  Y  SG  +EA  +F  M+  N++ ++  Y+
Sbjct: 268 RKGVDE-ILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYS 326

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           ++I    + G + K    +FD+M +  + P+  T+ +L+    + G  EAA  L  EM  
Sbjct: 327 SMISWSRRLG-NMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQS 385

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           +G+D ++  +NT +D  C+  +MD A  + A M  K I+ +V TY+ + +G  K  R D+
Sbjct: 386 KGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDE 445

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  + + M   G+  + V++   + IY K G   EA  + ++ME  G   + +TYN L+ 
Sbjct: 446 AKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLID 505

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
            Y K+ K  +  ++  +M    + P+L TYS+LI      G   EA+++F E +  G+  
Sbjct: 506 AYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITR 565

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
           +V  Y+++I  L K G  + A  L DEM K G+ P+   + S++ +F +  T
Sbjct: 566 NVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHKPLT 617



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 207/463 (44%), Gaps = 55/463 (11%)

Query: 280 FKHVVEIFDDMLRNG-VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG-IDQDIFTY 337
           F   + ++D +   G V  +R  F  LLA+  R G  +     F+ MV     +  + + 
Sbjct: 161 FDETIRVYDYVEEKGLVIEERSCFVLLLAL-KRCGEVDFCVRFFHRMVESNKFEIRVQSL 219

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNI-SPNVVTYSTMIDGYAKAGR-----LDDALNM 391
             ++D +C+  +++ A E+M EM  K I  PNV TY+T+++ Y   GR     +D+ L +
Sbjct: 220 TLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYV--GRKDRKGVDEILKL 277

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
             + +   +     +Y+ ++  Y+  G  EEA  + +EM    I  D   Y++++    +
Sbjct: 278 MEKEQ---VVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRR 334

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G       +F++M    + PN  TY  LI    K G  + A  +  E +  G+  ++V+
Sbjct: 335 LGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVI 394

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           ++  +D  C+ G ++ A+ L   M K+GI  +V TYN + +   +              L
Sbjct: 395 FNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCK--------------L 440

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
            +  E+  +  + S  +K V+    T    I+++      K G   +  R          
Sbjct: 441 HRYDEAKCI--LNSMVEKGVKPNVVTFTMFIEIYC-----KEGNLAEAER---------- 483

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVY-GVAHG-L 685
           +F+ M K    PN++T++ +++A  +    + A  +  E+     L D   Y  + HG  
Sbjct: 484 LFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGEC 543

Query: 686 LMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           ++G  D    +AL LF+E++L   +   A Y ++   L   G+
Sbjct: 544 IVGRVD----EALKLFNEMRLKGITRNVATYTSMISGLSKEGR 582



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 59/268 (22%), Positives = 104/268 (38%), Gaps = 33/268 (12%)

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           L  V S   L+ E ++++   ++ GL  +      L+ AL + G V+  V     M +  
Sbjct: 151 LFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESN 210

Query: 540 -IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
                V +   +ID   R    E   + ++  +GK     N                   
Sbjct: 211 KFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPN------------------- 251

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
                VF       A  G+K+ +   EIL      + M K ++  +V T+S ++   S  
Sbjct: 252 -----VFTYNTLLNAYVGRKDRKGVDEIL------KLMEKEQVVFSVATYSILIQWYSSS 300

Query: 659 NSFEDASMLLEELRL--FDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFY 716
              E+A  + EE+R    +  VY  +  +    R     +A +LFDE+   D    +  Y
Sbjct: 301 GDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTY 360

Query: 717 NALTDMLWHFGQKRGAQLVVLEGKRRQV 744
            AL   +   GQ   A++++LE + + V
Sbjct: 361 GALIGGVCKAGQMEAAEILLLEMQSKGV 388


>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 192/360 (53%), Gaps = 3/360 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S   + GK   A  IFE   NEG    +  F+ALI  +G  G   E + VF  +K 
Sbjct: 108 TTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKT 167

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           +   P++VT+N ++   G+ G+D   V  +F +M R G  P+R TFN+L++  SR G ++
Sbjct: 168 FQCSPDIVTWNTLLSVFGQNGMD-SEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFD 226

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  ++  M+  G++ D+ +YN +L A+ +G     + +++AEM      PN +TY +++
Sbjct: 227 QAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLL 286

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDR-VSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
             YA    ++    +  E+ + GI   R V   T++ + +K     E      E+   G 
Sbjct: 287 HAYANGKEIERMCALAEEI-YSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGF 345

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  T NA++  YG++    +   + + MK    +P+L TY++L+ +YS+   ++ + +
Sbjct: 346 SPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEE 405

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I RE    G++ D++ Y+ +I A C+NG +  A  +L EM + G  P+++TYN+ I ++ 
Sbjct: 406 ILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYA 465



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 217/475 (45%), Gaps = 33/475 (6%)

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
           GRL   D A  +    + +G    V+ ++ L+S + ++G  + A+ +F  M+    KPN+
Sbjct: 81  GRLSPPD-ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNI 139

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            T+NA+I   G  G  F  ++++F+D+      PD +T+N+LL+V  + G+      +F 
Sbjct: 140 CTFNALIKMHGNRG-KFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFK 198

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EM   G   +  T+NTL+ +  +    D A  +   M    ++P++ +Y+ ++   A+ G
Sbjct: 199 EMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGG 258

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
               +  + +EMK      + ++Y ++L  YA     E    + +E+ S  I   AV   
Sbjct: 259 LWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLK 318

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+    K     E  R F +++    SP++ T + ++ +Y +  +  +A +I    K+ 
Sbjct: 319 TLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRG 378

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           G    +  Y++L+    ++   E +  +L E+  +GIRP++++YN++I A+ R+      
Sbjct: 379 GFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNG----R 434

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
           + D  R L + +ES                        I  +   +A  A          
Sbjct: 435 MRDASRVLSEMRESGPAPD-------------------IITYNTFIASYAADSM------ 469

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
              +  + V   M K   KPN  T+++I++   + N  ++ASM +  LR  D  +
Sbjct: 470 --FVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRKLDPHI 522



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 190/418 (45%), Gaps = 46/418 (11%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK----LASAMISILGRLGKVDLAKN 214
           YT LL      G+   A+Q F      EE +N+  K      +A+I + G  GK      
Sbjct: 107 YTTLLSGFEKAGKDKAAVQIF------EEMRNEGCKPNICTFNALIKMHGNRGKFTEMMK 160

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +FE          +  ++ L+S +G++G   E   VF  MKR    P   T+N +I +  
Sbjct: 161 VFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYS 220

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           + G  F   + ++  ML  GV PD  ++N++LA  +RGGLW+ +  +  EM       + 
Sbjct: 221 RCG-SFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNE 279

Query: 335 FTYNTLLDAICKGAQMD----LAFEIMA-------------------------------E 359
            TY +LL A   G +++    LA EI +                               E
Sbjct: 280 LTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLE 339

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           +  +  SP++ T + M+  Y +   +  A  +   MK  G      +YN+++ +Y++   
Sbjct: 340 LRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSAN 399

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
           FE +  + +E+ + GIR D ++YN ++  Y + G+  +  R+  +M+    +P+++TY+T
Sbjct: 400 FERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNT 459

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
            I  Y+   ++ EA+ +     + G K +   Y++++D  CK    + A   ++ + K
Sbjct: 460 FIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRK 517



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 39/219 (17%)

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +A+++  +  + G+K DV  Y+ L+    K G  ++AV + +EM  EG +PN+ T+N++I
Sbjct: 87  DALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALI 146

Query: 552 DAFG-RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
              G R   TE  +  V  D+   +        CS D         T N ++ VFGQ   
Sbjct: 147 KMHGNRGKFTE--MMKVFEDIKTFQ--------CSPDIV-------TWNTLLSVFGQ--- 186

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA----SM 666
                    N    E+    GVF++M +    P   TF+ ++++ SRC SF+ A      
Sbjct: 187 ---------NGMDSEVS---GVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKR 234

Query: 667 LLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVK 705
           +LE     D   Y      L   R  +W Q+  +  E+K
Sbjct: 235 MLEAGVNPDLSSYNAVLAALA--RGGLWKQSEKVLAEMK 271


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 227/512 (44%), Gaps = 81/512 (15%)

Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           D+L+K     C  D   YT L+  LG      +A + F     R    +      +A+I 
Sbjct: 42  DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTV--CYTALIR 99

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            L + GK+  A ++++T  + G    V   S +I    ++G    A+ +F SM+   L P
Sbjct: 100 ELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP 159

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           N V Y+A+I    K        +E+   M +    PD IT+N L+    + G  EAAR  
Sbjct: 160 NEVVYSALIHGLCKAR-KMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAF 218

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICK------------------GAQMDL----------- 352
           F+EM+  G   D++TYN L+   CK                  G  +D+           
Sbjct: 219 FDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLA 278

Query: 353 -------AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN--------------- 390
                  A  +M ++ A   +P + TY+ +++G  K GRL++A++               
Sbjct: 279 KNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVV 338

Query: 391 --------------------MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
                               +F EM   G+ LD V Y  ++    + G+  +A  V K M
Sbjct: 339 TYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM 398

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
            S G   D VT + ++ G  K G+     R+F+ M+A  ++PN + YS LI    K    
Sbjct: 399 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 458

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             A+++  + K+A    D + Y+ LID LCK+G VE+A +  DEM + G +P+V TYN +
Sbjct: 459 DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 518

Query: 551 IDAFGRSATTE--CTVDDVERDLGKQKESANL 580
           I  F ++  T+  C V D   D+   + SAN+
Sbjct: 519 ISGFCKAGNTDAACGVFD---DMSSSRCSANV 547



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 204/469 (43%), Gaps = 74/469 (15%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+REL   G+  +A   +   +       D   L S MI  L + G++  A  IF++
Sbjct: 94  YTALIRELLQTGKIPQASSVYK-TMTSHGCVPDVVTL-STMIDGLSKAGRIGAAVRIFKS 151

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G       +SALI    ++     A+ +   MK+    P+ +TYN +ID   K G 
Sbjct: 152 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSG- 210

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           D +     FD+ML  G +PD  T+N L++  C  G    A+ +L  E    G   DI TY
Sbjct: 211 DVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTY 270

Query: 338 -----------------------------------NTLLDAICKGAQMDLAFEIMAEMPA 362
                                              N LL+ +CK  +++ A +++ ++  
Sbjct: 271 TAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 330

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL----------- 411
              +P+VVTY+++IDG  K  R  +A  +F EM   G+ LD V Y  ++           
Sbjct: 331 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQ 390

Query: 412 --SIY----------------------AKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
             S+Y                      +K GR   A+ + K ME+ G+  + V Y+AL+ 
Sbjct: 391 ASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 450

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           G  K  K D    M  QMK    +P+ +TY+ LID   K G  + A   F E  +AG K 
Sbjct: 451 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 510

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           DV  Y+ LI   CK G  ++A  + D+M+      NVVTY ++I    +
Sbjct: 511 DVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCK 559



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 178/350 (50%), Gaps = 2/350 (0%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K++ A  + E     G   T+  ++AL++   + G  +EAI +   +      P++VTY 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           ++ID  GK    F+   ++F +M   G+  D + + +L+    + G    A +++  M  
Sbjct: 61  SLIDGLGKEKRSFE-AYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTS 119

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G   D+ T +T++D + K  ++  A  I   M A+ ++PN V YS +I G  KA ++D 
Sbjct: 120 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 179

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           AL M ++MK      D ++YN ++    K G  E A     EM  +G + D  TYN L+ 
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239

Query: 448 GYGKQGKYDEV-RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
           G+ K G  D     + ++   +  + ++ TY+ ++D  +K    +EA+ +  +    G  
Sbjct: 240 GFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCT 299

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             +  Y+AL++ LCK G +E A+ LL ++   G  P+VVTY S+ID  G+
Sbjct: 300 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 349



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 194/417 (46%), Gaps = 36/417 (8%)

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  L  ++   G    I TYN LL+ +CK  +++ A +++ ++     +P+VVTY+++
Sbjct: 3   EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 62

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K  R  +A  +F EM   G+ LD V Y  ++    + G+  +A  V K M S G 
Sbjct: 63  IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 122

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VT + ++ G  K G+     R+F+ M+A  ++PN + YS LI    K      A++
Sbjct: 123 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 182

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +  + K+A    D + Y+ LID LCK+G VE+A +  DEM + G +P+V TYN +I  F 
Sbjct: 183 MLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFC 242

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
           ++  T    D     L  Q+ + N    C+ D              I  +  +V   A  
Sbjct: 243 KAGNT----DAASHSLA-QETTIN---GCTID--------------IHTYTAIVDWLAKN 280

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 675
            K E          + + +K+      P + T++A+LN   +    E+A  LL   ++ D
Sbjct: 281 KKIEEA--------VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR--KIVD 330

Query: 676 NQVYG---VAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           N           L+ G  ++    +A  LF E+ L   +  +  Y AL   L   G+
Sbjct: 331 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGK 387



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 166/343 (48%), Gaps = 4/343 (1%)

Query: 199 MISILGRLGKVDLAKNIF--ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +IS   + G  D A +    ET +N G    ++ ++A++    ++   +EA+++   +  
Sbjct: 237 LISGFCKAGNTDAASHSLAQETTIN-GCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITA 295

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P + TYNA+++   K G   +  +++   ++ NG  PD +T+ SL+    +     
Sbjct: 296 NGCTPTIATYNALLNGLCKMG-RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSF 354

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF EM  RG+  D   Y  L+  + +  ++  A  +   M +    P+VVT STMI
Sbjct: 355 EAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMI 414

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG +KAGR+  A+ +F  M+  G+  + V Y+ ++    K  + + AL +  +M+ +   
Sbjct: 415 DGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 474

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +TYN L+ G  K G  +  R  F++M      P++ TY+ LI  + K G    A  +
Sbjct: 475 PDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 534

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           F +   +   A+VV Y ALI  LCK   +  A      M + G
Sbjct: 535 FDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 147/291 (50%), Gaps = 1/291 (0%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
            +  V + + +  NG  P   T+N+LL    + G  E A +L  ++V  G   D+ TY +
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+D + K  +   A+++  EM  + ++ + V Y+ +I    + G++  A +++  M   G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
              D V+ +T++   +K GR   A+ + K ME+ G+  + V Y+AL+ G  K  K D   
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            M  QMK    +P+ +TY+ LID   K G  + A   F E  +AG K DV  Y+ LI   
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 520 CKNGLVESAV-SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           CK G  ++A  SL  E T  G   ++ TY +I+D   ++   E  V  +E+
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEK 292


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 203/393 (51%), Gaps = 3/393 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L   G+  +A   F  A+      N  G   + +I  L + G VD A+ +   
Sbjct: 352 YTALMDWLCKEGKIDEAKDMFRHALSDNHTPN--GVTYTVLIDALCKAGNVDGAEQVLSE 409

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +     V  FS++I+   + G+  +A      MK   + PN+VTY  VID   K  +
Sbjct: 410 MEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKC-L 468

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +  ++++ +ML  GV+ ++   +SL+    + G  E A  LF EM  RG+  D   Y 
Sbjct: 469 GQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYT 528

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+D + K   +  AF++  E+  KN+ P+ V Y+  I+     G+  +A +   EM+  
Sbjct: 529 TLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQST 588

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D+V+YNT+++  ++ G+  +AL +   M+ S I+ + +TY+ L+ G  + G  ++ 
Sbjct: 589 GLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKA 648

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
           + +  +M +   SP  LT+  ++   S+G      ++I      AGL AD+ +Y+ L+  
Sbjct: 649 KYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRV 708

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           LC NG+   A+ +L+EM+  GI P+ +T+N++I
Sbjct: 709 LCYNGMTRKAMVVLEEMSGRGIAPDTITFNALI 741



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 204/421 (48%), Gaps = 43/421 (10%)

Query: 180 AFAVKREERKNDQGKLA-----SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSAL 234
           AFAV   ER   QG        +++++ L R G+VD A+++ +T   +G    V  ++  
Sbjct: 193 AFAVA--ERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMF 250

Query: 235 ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG 294
           I  Y R     +A S++  M R  + P++VT +A++    K G  F     +F +M + G
Sbjct: 251 IVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDG-RFSEAYALFREMEKIG 309

Query: 295 VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF------------------- 335
             P+ +T+  L+   ++      + +L  E+V RG+  D+                    
Sbjct: 310 AAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAK 369

Query: 336 ----------------TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
                           TY  L+DA+CK   +D A ++++EM  K+ISPNVVT+S++I+G 
Sbjct: 370 DMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGL 429

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K G +  A +   EMK  GI  + V+Y TV+    K    E AL V  EM   G+  + 
Sbjct: 430 VKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNK 489

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
              ++L+ G  K GK ++   +F +M    V  + + Y+TLID   K G    A ++ +E
Sbjct: 490 FIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQE 549

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             +  L  D V+Y+  I+ LC  G  + A S L+EM   G++P+ VTYN++I A  R   
Sbjct: 550 LTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGK 609

Query: 560 T 560
           T
Sbjct: 610 T 610



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 164/304 (53%), Gaps = 1/304 (0%)

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           ++V +N+++D   K G D +    + + M   GV  D + +NSL+A   R G  +AAR++
Sbjct: 173 DVVGWNSLVDGYCKVG-DMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDM 231

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            + M   G++ ++ TY   +   C+   +D AF +  EM  K + P+VVT S ++ G  K
Sbjct: 232 VDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCK 291

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            GR  +A  +F EM+ +G   + V+Y  ++   AK  R  E+L +  E+ S G+  D + 
Sbjct: 292 DGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIM 351

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y AL+    K+GK DE + MF    +D  +PN +TY+ LID   K G    A Q+  E +
Sbjct: 352 YTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEME 411

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +  +  +VV +S++I+ L K G V  A   + EM + GI PNVVTY ++ID   +    E
Sbjct: 412 EKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQE 471

Query: 562 CTVD 565
             +D
Sbjct: 472 AALD 475



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 154/624 (24%), Positives = 273/624 (43%), Gaps = 86/624 (13%)

Query: 203 LGRLGKVDLAKNIFETALNEGY--GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           L R G+VD A  + E  +  G   G  V  +++L+  Y + G  + A +V   MK   + 
Sbjct: 147 LCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVG 206

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            ++V YN+++   C  G VD     ++ D M R+GV+P+ +T+   +    R    + A 
Sbjct: 207 VDVVGYNSLVAGLCRAGEVDAAR--DMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAF 264

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           +L+ EMV +G+  D+ T + L+  +CK  +   A+ +  EM     +PN VTY  +ID  
Sbjct: 265 SLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTL 324

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
           AKA R +++L++  E+   G+ +D + Y  ++    K G+ +EA  + +   S     + 
Sbjct: 325 AKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNG 384

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           VTY  L+    K G  D   ++  +M+   +SPN++T+S++I+   K G   +A    RE
Sbjct: 385 VTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMRE 444

Query: 500 FKQAGLKADVVLYSALIDA-----------------LC------------------KNGL 524
            K+ G+  +VV Y  +ID                  LC                  KNG 
Sbjct: 445 MKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGK 504

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT--------TECTVDDVERD------ 570
           +E A +L  EM + G+  + V Y ++ID   ++           E T  ++  D      
Sbjct: 505 IEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNV 564

Query: 571 -------LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
                  LGK KE+ +         +++Q  G   +Q+   +  ++A ++ +GK      
Sbjct: 565 FINCLCMLGKSKEAESF-------LEEMQSTGLKPDQV--TYNTMIAAQSREGKTAK--- 612

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH 683
                 L +   M +  IKPN++T+S ++       + E A  LL E+         + H
Sbjct: 613 -----ALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTH 667

Query: 684 GLLM-----GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
             ++     G R ++ ++         L    T    YN L  +L + G  R A +V+ E
Sbjct: 668 RRVLQACSQGRRSDLILEIHEWMMNAGLCADITV---YNTLVRVLCYNGMTRKAMVVLEE 724

Query: 739 GKRRQVWENVWSESCLDLHLMSSG 762
              R +  +  + + L L    SG
Sbjct: 725 MSGRGIAPDTITFNALILGHFKSG 748



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 181/357 (50%), Gaps = 1/357 (0%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I+ L  LGK   A++  E   + G       ++ +I+A  R G   +A+ + N MKR ++
Sbjct: 566 INCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSI 625

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           KPNL+TY+ +I    + G   +    + ++M  +G  P  +T   +L  CS+G   +   
Sbjct: 626 KPNLITYSTLIVGLFEAGA-VEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLIL 684

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            +   M++ G+  DI  YNTL+  +C       A  ++ EM  + I+P+ +T++ +I G+
Sbjct: 685 EIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGH 744

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K+G LD+A + + +M + GI  +  ++NT+L      GR  E+ +V  EM+  GI    
Sbjct: 745 FKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSN 804

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           +TY+ L+ GYGKQ    E  R++ +M      P + TY+ LI  +SK G+  +A ++F E
Sbjct: 805 LTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNE 864

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +  G+      Y  L+    K          L +M ++G  P+  T +SI  AF +
Sbjct: 865 MQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSK 921



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 141/564 (25%), Positives = 259/564 (45%), Gaps = 31/564 (5%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L +  + + + ++    ++ G    +  ++AL+    + G   EA  +F      N
Sbjct: 320 LIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDN 379

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             PN VTY  +IDA C  G VD     ++  +M    + P+ +TF+S++    + G    
Sbjct: 380 HTPNGVTYTVLIDALCKAGNVDGAE--QVLSEMEEKSISPNVVTFSSIINGLVKRGWVGK 437

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A +   EM  RGID ++ TY T++D   K    + A ++  EM  + +  N     ++++
Sbjct: 438 ATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVN 497

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K G+++ A  +F EM   G+ LD V+Y T++    K G    A  V +E+    +  
Sbjct: 498 GLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLP 557

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           DAV YN  +      GK  E     E+M++  + P+ +TY+T+I   S+ G   +A+++ 
Sbjct: 558 DAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLL 617

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
              K++ +K +++ YS LI  L + G VE A  LL+EM+  G  P  +T+  ++ A  + 
Sbjct: 618 NGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQG 677

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEA---GRTDNQIIKVFGQLVAEKAG 614
             +     D+  ++ +   +A L A  +  +  V+     G T   ++     ++ E +G
Sbjct: 678 RRS-----DLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMV-----VLEEMSG 727

Query: 615 QGKKENRCRQEILCILGVFQKMH------------KLKIKPNVVTFSAILNACSRCNSFE 662
           +G   +      L ILG F+  H               I PNV TF+ +L          
Sbjct: 728 RGIAPDTITFNAL-ILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIG 786

Query: 663 DASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALT 720
           ++ M+L E++    +   + + +L+ GY + +  V+A+ L+ E+         + YNAL 
Sbjct: 787 ESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALI 846

Query: 721 DMLWHFGQKRGAQLVVLEGKRRQV 744
                 G    A+ +  E + R V
Sbjct: 847 SDFSKVGMMSQAKELFNEMQNRGV 870



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 208/479 (43%), Gaps = 73/479 (15%)

Query: 290 MLRNGVQPDRITFNSLLAVCS-RGGLWEAARNLFNEMVHRGIDQDIFTYNTLL------- 341
           +LR+    D +++N +++  S +GGL  A   L  EM  RG+  D  T NT+L       
Sbjct: 94  LLRSSESVDTVSYNVVMSGFSEQGGL--APEALLAEMCKRGVPFDAVTVNTVLVGLCRDG 151

Query: 342 ------------------------------DAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
                                         D  CK   M+ AF +   M A+ +  +VV 
Sbjct: 152 RVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVG 211

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y++++ G  +AG +D A +M   MK  G+  + V+Y   +  Y +    ++A  + +EM 
Sbjct: 212 YNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMV 271

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G+  D VT +AL+GG  K G++ E   +F +M+    +PN +TY  LID  +K     
Sbjct: 272 RKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGN 331

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           E++ +  E    G+  D+++Y+AL+D LCK G ++ A  +      +   PN VTY  +I
Sbjct: 332 ESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLI 391

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
           DA  ++      VD  E+ L + +E            K +     T + II        +
Sbjct: 392 DALCKAG----NVDGAEQVLSEMEE------------KSISPNVVTFSSIINGL----VK 431

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +   GK  +  R+           M +  I PNVVT+  +++   +C   E A  +  E+
Sbjct: 432 RGWVGKATDYMRE-----------MKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEM 480

Query: 672 RLFDNQVYG-VAHGLLMGYRDNIWVQ-ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
                +V   +   L+ G + N  ++ A +LF E+           Y  L D L+  G 
Sbjct: 481 LCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGN 539



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 163/380 (42%), Gaps = 66/380 (17%)

Query: 402 LDRVSYNTVLSIYAKLGRFE-EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
           +D VSYN V+S +++ G    EALL   EM   G+  DAVT N +L G  + G+ D    
Sbjct: 101 VDTVSYNVVMSGFSEQGGLAPEALLA--EMCKRGVPFDAVTVNTVLVGLCRDGRVDRA-- 156

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
                            + L +V  +GG               GL  DVV +++L+D  C
Sbjct: 157 -----------------AALAEVMVRGG------------GIGGL--DVVGWNSLVDGYC 185

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT---VDDVERDLGKQKES 577
           K G +E+A ++ + M  +G+  +VV YNS++    R+   +     VD ++RD G +   
Sbjct: 186 KVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRD-GVEPNV 244

Query: 578 ANLDAM----CSQDDKDVQEAGRTDNQIIK--VFGQLVAEKAGQGK--KENRCRQEILCI 629
                     C ++  D  +A     ++++  V   +V   A  G   K+ R  +     
Sbjct: 245 VTYTMFIVEYCRRNAVD--DAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEA---- 298

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY 689
             +F++M K+   PN VT+  +++  ++     ++  LL E+        GV   L+M  
Sbjct: 299 YALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV-----VSRGVVMDLIMYT 353

Query: 690 RDNIWVQALSLFDEVK------LMDSSTASAF-YNALTDMLWHFGQKRGAQLVVLEGKRR 742
               W+      DE K      L D+ T +   Y  L D L   G   GA+ V+ E + +
Sbjct: 354 ALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEK 413

Query: 743 QVWENVWSESCLDLHLMSSG 762
            +  NV + S +   L+  G
Sbjct: 414 SISPNVVTFSSIINGLVKRG 433


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 220/445 (49%), Gaps = 16/445 (3%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           ++++ +I+   R+G   +A+ VF+ M    + PN +TYN +ID   KGG D +    + D
Sbjct: 64  FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGG-DLEAGFRLRD 122

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M+ +G++P+ IT+N LL+   R G       L +EM  + +  D FTY+ L D + +  
Sbjct: 123 QMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNG 182

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
                  +  +     ++    T S +++G  K G++  A  +   +   G+   RV YN
Sbjct: 183 DSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYN 242

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+++ Y + G  E A     +M+S  I+ D +TYNAL+ G  K  +    + +  +M+ +
Sbjct: 243 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 302

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V+P + T++TLID Y + G  ++   +  E ++ GLK +VV Y ++++A CKNG +  A
Sbjct: 303 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 362

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER----DLGKQKESANL--DA 582
           V++LD+M  + + PN   YN+IIDA+      +     VE+     +     + NL    
Sbjct: 363 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 422

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC--RQEILCILGVFQKMHKLK 640
           +C+Q    + EA    N +     +L+ +        + C  R  I   L + Q+MHK  
Sbjct: 423 LCNQ--SQISEAEEIINSLSN--HRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 478

Query: 641 IKPNVVTFSAI---LNACSRCNSFE 662
           IK  V T+  +   L    R N  E
Sbjct: 479 IKSTVRTYHQLISGLGGAGRLNEME 503



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 195/395 (49%), Gaps = 13/395 (3%)

Query: 172 WSKAIQ-CFAF-----AVKREERKNDQGKLA------SAMISILGRLGKVDLAKNIFETA 219
           W+KA+Q C A      AV    R    G         + +I+ + R G+   A  +F+  
Sbjct: 30  WNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEM 89

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
                      ++ +I  + + G  +    + + M  + LKPN +TYN ++    + G  
Sbjct: 90  TERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAG-R 148

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
                 + D+M    + PD  T++ L    SR G  +A  +LF + +  G+    +T + 
Sbjct: 149 MGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSI 208

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           LL+ +CK  ++ +A E++  +    + P  V Y+T+I+GY + G L+ A + F +MK   
Sbjct: 209 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 268

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I  D ++YN +++   K  R   A  +  EM+ +G+     T+N L+  YG+ G+ ++  
Sbjct: 269 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 328

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +  +M+ + + PN+++Y ++++ + K G   EA+ I  +     +  +  +Y+A+IDA 
Sbjct: 329 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 388

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            ++G  + A  L+++M   GI P++VTYN +I   
Sbjct: 389 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 423



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 189/419 (45%), Gaps = 43/419 (10%)

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP-DRITFNSLLAVCSRGGLWEAA 318
           +P+   +N  + AC   G D    V +   M R+G  P +  ++N ++A     G+W A 
Sbjct: 24  RPDTFAWNKAVQACVAAG-DLGEAVGMLRRMGRDGAPPPNAFSYNVVIA-----GMWRAG 77

Query: 319 RN-----LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           R      +F+EM  R +  +  TYNT++D   KG  ++  F +  +M    + PN +TY+
Sbjct: 78  RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYN 137

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            ++ G  +AGR+ +   +  EM    +  D  +Y+ +    ++ G  +  L +  +   +
Sbjct: 138 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKN 197

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G+     T + LL G  K GK      + + +    + P  + Y+TLI+ Y + G  + A
Sbjct: 198 GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGA 257

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
              F + K   +K D + Y+ALI+ LCK   + +A  LL EM   G+ P V T+N++IDA
Sbjct: 258 FSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 317

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
           +GR+   E                      C     ++QE G   N  +  +G +V    
Sbjct: 318 YGRTGQLE---------------------KCFIVLSEMQENGLKPN--VVSYGSIVNAFC 354

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             GK        I   + +   M    + PN   ++AI++A       + A +L+E+++
Sbjct: 355 KNGK--------IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 405



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 180/380 (47%), Gaps = 3/380 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L   L   G+    +  F   +K      D     S +++ L + GKV +A+ + ++
Sbjct: 171 YSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY--TCSILLNGLCKDGKVSIAEEVLQS 228

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +N G   T   ++ LI+ Y ++G  + A S F  MK  ++KP+ +TYNA+I+   K   
Sbjct: 229 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA-E 287

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
              +  ++  +M  NGV P   TFN+L+    R G  E    + +EM   G+  ++ +Y 
Sbjct: 288 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG 347

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           ++++A CK  ++  A  I+ +M  K++ PN   Y+ +ID Y + G  D A  +  +MK  
Sbjct: 348 SIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 407

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI    V+YN ++       +  EA  +   + +  +  DAV+YN L+     +G  D+ 
Sbjct: 408 GISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKA 467

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + ++M    +   + TY  LI      G   E   ++++  Q  +     +++ +++A
Sbjct: 468 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 527

Query: 519 LCKNGLVESAVSLLDEMTKE 538
             K G    A  L  EM ++
Sbjct: 528 YSKYGNEIKAEDLRKEMLQK 547



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 126/312 (40%), Gaps = 62/312 (19%)

Query: 417 LGRFEEALLVCKEMESSGIRKD------------------------------------AV 440
           LGR  +       + S+G R D                                    A 
Sbjct: 5   LGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAF 64

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           +YN ++ G  + G+  +   +F++M    V PN +TY+T+ID + KGG  +   ++  + 
Sbjct: 65  SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 124

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
              GLK + + Y+ L+  LC+ G +    +LLDEM  + + P+  TY+ + D   R+  +
Sbjct: 125 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 184

Query: 561 ECTVDDVERDL------GKQKESANLDAMCSQDDKDVQE--------AGRTDNQIIKVFG 606
           +  +    + L      G    S  L+ +C      + E        AG    ++I  + 
Sbjct: 185 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI--YN 242

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            L+      G+ E             F +M    IKP+ +T++A++N   +     +A  
Sbjct: 243 TLINGYCQTGELEGA--------FSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 294

Query: 667 LLEELRLFDNQV 678
           LL E++  DN V
Sbjct: 295 LLMEMQ--DNGV 304


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 209/403 (51%), Gaps = 9/403 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  ++  L   G+  KA   +   + R  R +      +++I+ L +   +D A  +   
Sbjct: 14  YNTIIDGLFKEGDVDKAYITYHEMLDR--RVSPDAVTYNSIIAALSKAQAMDRAMEVLTV 71

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +        + +++++  Y  SG  ++AI +F  M    ++P++VTYN+++D   K G 
Sbjct: 72  MVMPN----CFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNG- 126

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
                 +IFD M++ G++PD  T+ +LL    S+G L E   +L   MV  G+  D   +
Sbjct: 127 KCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEM-HDLLALMVQNGMQLDHHVF 185

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L+ A  K  ++D    + ++M  + ++PN V Y T+IDG  K GRLDDA+  F +M  
Sbjct: 186 NILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMID 245

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  + V Y +++       ++E+A  +  E+   GI  + V +N +L    K+G+  E
Sbjct: 246 KGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIE 305

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            +++F+ +    V+P+++TYSTLID Y   G    AM++       GLK D V YS LI+
Sbjct: 306 SKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLIN 365

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
             CK   +E A++L  EM   G+ P+++TYN I+    R+  T
Sbjct: 366 GYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRT 408



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 199/413 (48%), Gaps = 38/413 (9%)

Query: 261 PNLVTYNAVIDACGK-GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           P++V+YN +ID   K G VD  ++   + +ML   V PD +T+NS++A  S+    + A 
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYIT--YHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            +   MV      + FTYN+++   C   Q + A  I  +M +  I P+VVTY++++D  
Sbjct: 67  EVLTVMVM----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYL 122

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K G+  +A  +F  M   G+  D  +Y T+L  YA  G   E   +   M  +G++ D 
Sbjct: 123 CKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDH 182

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
             +N L+  Y KQ K DEV  +F +M+   ++PN + Y T+ID   K G   +AM  F +
Sbjct: 183 HVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQ 242

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
               GL  +VV+Y++LI ALC     E A  L+ E+  +GI PN+V +N+I+D+  +   
Sbjct: 243 MIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKE-- 300

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
                       G+  ES  L  +               N  +  +  L+      GK +
Sbjct: 301 ------------GRVIESKKLFDLLGHIGV---------NPDVITYSTLIDGYCLAGKMD 339

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              +        +   M  + +KP+ VT+S ++N   + N  EDA  L +E+ 
Sbjct: 340 GAMK--------LLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEME 384



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 95/190 (50%), Gaps = 3/190 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  L    K + A+ +    L++G    +  F+ ++ +  + G   E+  +F+ +  
Sbjct: 256 TSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGH 315

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + P+++TY+ +ID  C  G +D    +++   M+  G++PD +T+++L+    +    
Sbjct: 316 IGVNPDVITYSTLIDGYCLAGKMD--GAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRM 373

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  LF EM   G++ DI TYN +L  + +  +   A E+ A +        + TY+ +
Sbjct: 374 EDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNII 433

Query: 376 IDGYAKAGRL 385
           +  +AK   L
Sbjct: 434 LMDFAKTNSL 443



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 3/183 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L    +W KA +   F +  ++  N      + ++  L + G+V  +K +F+ 
Sbjct: 255 YTSLIHALCTYDKWEKAEE-LIFEI-LDQGINPNIVFFNTILDSLCKEGRVIESKKLFDL 312

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + G    V  +S LI  Y  +G    A+ +   M    LKP+ VTY+ +I+   K   
Sbjct: 313 LGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKIN- 371

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +  + +F +M  NGV PD IT+N +L    R     AA+ L+  +   G   ++ TYN
Sbjct: 372 RMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYN 431

Query: 339 TLL 341
            +L
Sbjct: 432 IIL 434


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 269/583 (46%), Gaps = 52/583 (8%)

Query: 168 NRGEWSKAIQCFAFAVKREER--KNDQGKLA------SAMISILGRLGKVDLAKNIFETA 219
           NR     A    A AV R  R  +   GK+       + +I    R G++DL        
Sbjct: 59  NRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNV 118

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
           + +G+      F+ L+          +A+  V   M      P++ +YN ++    KG  
Sbjct: 119 VKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLL----KGLC 174

Query: 279 DFKHVVEIFD------DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           D     E  +      D    G  PD +++N++L    + G  + A + ++EM+ RGI  
Sbjct: 175 DENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILP 234

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D+ TY++++ A+CK   MD A E++  M    + P+ +TY++++ GY  +G+  +A+   
Sbjct: 235 DVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 294

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            +M+  G+  + V+Y+++++   K GR  EA  +   M   G+  D  TY  LL GY  +
Sbjct: 295 KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATK 354

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G   E+  + + M  + + P+   ++ LI  Y+K     +AM +F + +Q GL  +VV Y
Sbjct: 355 GALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCY 414

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG 572
             +ID LCK+G V+ A+   ++M  EG+ PN++ Y S+I          CT D  ++   
Sbjct: 415 GTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL-------CTCDKWDK--- 464

Query: 573 KQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
              E   L+ +         + G   N I   F  ++     +G+        ++    +
Sbjct: 465 --AEELILEML---------DRGICLNTIF--FNSIIDSHCKEGR--------VIESEKL 503

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-R 690
           F  M ++ +KP+++T++ +++ C      ++A+ LL  +     +   V +G L+ GY R
Sbjct: 504 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 563

Query: 691 DNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
            +    AL+LF E+     S     YN +   L+H  +   A+
Sbjct: 564 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 244/524 (46%), Gaps = 38/524 (7%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSM---KRYNLKPNLVTYNAVIDACGKGGVDFKHVV 284
           V++++ L+         QEA+ + + M   +     P++V+YN V++   K G D     
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG-DSDKAY 221

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
             + +ML  G+ PD +T++S++A   +    + A  + N MV  G+  D  TYN++L   
Sbjct: 222 STYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 281

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C   Q   A   + +M +  + PNVVTYS++++   K GR  +A  +F  M   G+  D 
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +Y T+L  YA  G   E   +   M  +GI+ D   +N L+  Y KQ K D+   +F +
Sbjct: 342 ATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M+   ++PN++ Y T+IDV  K G   +AM  F +    GL  ++++Y++LI  LC    
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVERDLGKQKE----S 577
            + A  L+ EM   GI  N + +NSIID+    GR   +E   D + R +G + +    +
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR-IGVKPDIITYN 520

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKV--------FGQLVAEKAGQGKKENRCRQEILCI 629
             +D  C     D  EA +    ++ V        +G L+       + ++         
Sbjct: 521 TLIDGCCLAGKMD--EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD--------A 570

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV----YGVA-HG 684
           L +F++M    + PN++T++ IL           A  L   +     Q+    Y +  HG
Sbjct: 571 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHG 630

Query: 685 LLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           L    ++N+  +AL +F  + L D    +  +N +   L   G+
Sbjct: 631 LC---KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 671



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 181/342 (52%), Gaps = 3/342 (0%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD 279
           ++G    V  +S+L++   ++G   EA  +F+SM +  L+P++ TY  ++     KG + 
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALV 358

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
             H   + D M+RNG+QPD   FN L+   ++    + A  +F++M   G++ ++  Y T
Sbjct: 359 EMHA--LLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++D +CK   +D A     +M  + ++PN++ Y+++I G     + D A  +  EM   G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I L+ + +N+++  + K GR  E+  +   M   G++ D +TYN L+ G    GK DE  
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++   M +  V P+++TY TLI+ Y +     +A+ +F+E   +G+  +++ Y+ ++  L
Sbjct: 537 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
                  +A  L   +TK G +  + TYN I+    ++  T+
Sbjct: 597 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTD 638



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 172/358 (48%), Gaps = 36/358 (10%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD-----FKH 282
           + F+ LI AY +     +A+ VF+ M+++ L PN+V Y  VID  C  G VD     F+ 
Sbjct: 377 HVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436

Query: 283 VV----------------------------EIFDDMLRNGVQPDRITFNSLL-AVCSRGG 313
           ++                            E+  +ML  G+  + I FNS++ + C  G 
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           + E+ + LF+ MV  G+  DI TYNTL+D  C   +MD A +++A M +  + P++VTY 
Sbjct: 497 VIESEK-LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYG 555

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+I+GY +  R+DDAL +F EM   G+  + ++YN +L       R   A  +   +  S
Sbjct: 556 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS 615

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G + +  TYN +L G  K    DE  RMF+ +    +     T++ +I    K G   EA
Sbjct: 616 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA 675

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             +F      GL  DV  YS + + L + G +E    L   M + G   +    NSI+
Sbjct: 676 KDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIV 733



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 176/357 (49%), Gaps = 7/357 (1%)

Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
             F+  R+   N        +I +L + G VD A   FE  ++EG    +  +++LI   
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRNGV 295
                  +A  +   M    +  N + +N++ID+  K G     V+E   +FD M+R GV
Sbjct: 457 CTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG----RVIESEKLFDLMVRIGV 512

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +PD IT+N+L+  C   G  + A  L   MV  G+  DI TY TL++  C+ ++MD A  
Sbjct: 513 KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 572

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           +  EM +  +SPN++TY+ ++ G     R   A  ++  +   G  L+  +YN +L    
Sbjct: 573 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC 632

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K    +EAL + + +  + ++ +  T+N ++G   K G+ DE + +F    A+ + P++ 
Sbjct: 633 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVR 692

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           TYS + +   + G  +E   +F   ++ G  AD  + ++++  L + G +  A + L
Sbjct: 693 TYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYL 749


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 154/576 (26%), Positives = 258/576 (44%), Gaps = 67/576 (11%)

Query: 200 ISILGRLGKVDL--AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           I + G L K  L   K I    + EG   +   F++L+ AY RSG    A  +   M + 
Sbjct: 82  ILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQC 141

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEI----FDDMLRNGVQPDRITFNSLLAVCSRGG 313
             +P  V YN +I          K V+++    + +ML  GV  +++  ++        G
Sbjct: 142 GCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIG 201

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            +E A N+  EM+ +G   D  TY+ ++  +C  ++++ AF++  EM    I+P+V  Y+
Sbjct: 202 KFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYT 261

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+ID + KAG ++ A N F EM+  G   + V+Y  ++  Y K  +  +A  V + M S 
Sbjct: 262 TLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSK 321

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV-----------------SPNLLT 476
           G   + VTY AL+ G  K GK ++  ++++ MK + V                  PN+ T
Sbjct: 322 GCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFT 381

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y  L+D   K    KEA  + +     G + + V+Y ALID  CK G ++ A  +   M 
Sbjct: 382 YGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTML 441

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN----------LDAMCSQ 586
           + G  PNV TY+S+ID   +       +D   + L K  E++           +D +C  
Sbjct: 442 ECGYDPNVYTYSSLIDRLFKDK----RLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKV 497

Query: 587 DDKD--------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
              D        ++E G   N +   +  ++ +  G+  +  +C       L + Q+M  
Sbjct: 498 GKTDEAYKLMVMMEEKGCNPNVV--TYTAMI-DGFGKSGRVEKC-------LELLQQMSS 547

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNI----- 693
               PN VT+  ++N C      ++A  LLEE++    Q Y   H  + GYR  I     
Sbjct: 548 KGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMK----QTYWPRH--VAGYRKVIEGFNR 601

Query: 694 -WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
            ++ +L L  E+   DS   +  Y  L D     G+
Sbjct: 602 EFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGR 637



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 189/377 (50%), Gaps = 18/377 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L    KV+ A  +F+     G    VY ++ LI ++ ++G+ ++A + F+ M+R
Sbjct: 226 SKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMER 285

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               PN+VTY A+I A  K         E+++ ML  G  P+ +T+ +L+    + G  E
Sbjct: 286 DGCAPNVVTYTALIHAYLKSR-KVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIE 344

Query: 317 AARNLFN------------EMVHRGID-----QDIFTYNTLLDAICKGAQMDLAFEIMAE 359
            A  ++             +M  R +D      ++FTY  L+D +CK  Q+  A +++  
Sbjct: 345 KASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKS 404

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M  +   PN V Y  +IDG  KAG+LD+A  +F+ M   G   +  +Y++++    K  R
Sbjct: 405 MSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKR 464

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            + AL V  +M  +    + V Y  ++ G  K GK DE  ++   M+    +PN++TY+ 
Sbjct: 465 LDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTA 524

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +ID + K G  ++ +++ ++    G   + V Y  LI+  C  GL++ A  LL+EM +  
Sbjct: 525 MIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTY 584

Query: 540 IRPNVVTYNSIIDAFGR 556
              +V  Y  +I+ F R
Sbjct: 585 WPRHVAGYRKVIEGFNR 601



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 139/608 (22%), Positives = 266/608 (43%), Gaps = 56/608 (9%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           GY    +       +  +SG  +EA+S+   +++    P+ V Y  +I    +  + F+ 
Sbjct: 5   GYRMDEFTLGCFAHSLCKSGKWREALSL---LEKEEFVPDTVLYTKMISGLCEASL-FEE 60

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            ++    M  +   P+ +T+  LL  C         + + + M+  G       +N+L+ 
Sbjct: 61  AMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVH 120

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR-----LDDALNMFSEMKF 397
           A C+      A++++ +M      P  V Y+ +I G   +       LD A   + EM  
Sbjct: 121 AYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLE 180

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+ L++V+ +        +G+FE+A  V +EM S G   D  TY+ ++G      K ++
Sbjct: 181 AGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEK 240

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             ++F++MK + ++P++  Y+TLID + K G  ++A   F E ++ G   +VV Y+ALI 
Sbjct: 241 AFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIH 300

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK-E 576
           A  K+  V  A  + + M  +G  PN+VTY ++ID   ++   E     + + + K+  E
Sbjct: 301 AYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIE-KASQIYKIMKKENVE 359

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE--KAGQGKKENRCRQEILCILGVFQ 634
             ++D      D      G ++   +  +G LV    KA Q K+             + +
Sbjct: 360 IPDVDMHFRVVD------GASNEPNVFTYGALVDGLCKAYQVKEAR----------DLLK 403

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL--FDNQVYGVAHGLLMGYRDN 692
            M     +PN V + A+++ C +    ++A  +   +    +D  VY  +  +   ++D 
Sbjct: 404 SMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDK 463

Query: 693 IWVQALSLFDEVKLMDSSTAS--AFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
               AL +    K++++S A     Y  + D L   G+   A  +++  + +    NV +
Sbjct: 464 RLDLALKVLS--KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVT 521

Query: 751 --------------ESCLDL--HLMSSGAARAMVHAWLLNIHS----IVFEGHELPKLLS 790
                         E CL+L   + S G A   V   +L  H     ++ E H+L + + 
Sbjct: 522 YTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMK 581

Query: 791 ILTGWGKH 798
             T W +H
Sbjct: 582 -QTYWPRH 588



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 190/439 (43%), Gaps = 27/439 (6%)

Query: 122 SVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCF 179
           +VV   AL H    +R      ++ +    K C  +   YT L+  L   G+  KA Q +
Sbjct: 291 NVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIY 350

Query: 180 AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYG 239
               K      D                 VD+   + + A NE     V+ + AL+    
Sbjct: 351 KIMKKENVEIPD-----------------VDMHFRVVDGASNEP---NVFTYGALVDGLC 390

Query: 240 RSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDR 299
           ++   +EA  +  SM     +PN V Y+A+ID C K G       E+F  ML  G  P+ 
Sbjct: 391 KAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAG-KLDEAQEVFTTMLECGYDPNV 449

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
            T++SL+    +    + A  + ++M+      ++  Y  ++D +CK  + D A+++M  
Sbjct: 450 YTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVM 509

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M  K  +PNVVTY+ MIDG+ K+GR++  L +  +M   G   + V+Y  +++     G 
Sbjct: 510 MEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGL 569

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            +EA  + +EM+ +   +    Y  ++ G+ ++     +   FE  + D V P    Y  
Sbjct: 570 LDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREF-IASLYLSFEISENDSV-PVAPVYRV 627

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAG--LKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           LID + K G  + A+++  E         A+  ++  LI+ L      + A  L  +M  
Sbjct: 628 LIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMIS 687

Query: 538 EGIRPNVVTYNSIIDAFGR 556
            G  P +     +I    R
Sbjct: 688 RGSIPELSILVHLIKGLLR 706



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/237 (21%), Positives = 96/237 (40%), Gaps = 38/237 (16%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + MI  L ++GK D A  +      +G    V  ++A+I  +G+SG  ++ + +   M
Sbjct: 486 IYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQM 545

Query: 255 KRYNLKPNLVTYNAVIDACGKGGV---------------------DFKHVVEIFD----- 288
                 PN VTY  +I+ C   G+                      ++ V+E F+     
Sbjct: 546 SSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIA 605

Query: 289 ------DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV----HRGIDQDIFTYN 338
                 ++  N   P    +  L+    + G  E A  L  E+         +Q+I  + 
Sbjct: 606 SLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNI--HI 663

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TL++ +    + D AFE+ A+M ++   P +     +I G  +  R ++AL +   +
Sbjct: 664 TLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720


>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
 gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 624

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 205/408 (50%), Gaps = 10/408 (2%)

Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETAL 220
            + R   + G + + ++ F + VK+    +++  +   + +   R  ++DL   IF   +
Sbjct: 159 LVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRR--RIDLCLEIFRRMV 216

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDF 280
           + G   TVY+ + ++    R G  +++  +        +KP   TYN +I+A  K   DF
Sbjct: 217 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQR-DF 275

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
             V  +   M ++GV  +++T+  L+ +  + G    A  LF+EM  RGI+ D+  Y +L
Sbjct: 276 SGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL 335

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +   C+   M  AF +  E+  K +SP+  TY  +IDG  K G +  A  + +EM+  G+
Sbjct: 336 ISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
            + +V +NT++  Y + G  +EA ++   ME  G + D  T N +   + +  +YDE ++
Sbjct: 396 NITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQ 455

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
              +M    V  + ++Y+ LIDVY K G  +EA ++F E    G++ + + Y+ +I A C
Sbjct: 456 WLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYC 515

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
           K G ++ A  L   M   G+ P+  TY S+I         EC  D+V+
Sbjct: 516 KQGKIKEARKLRANMEANGMDPDSYTYTSLIHG-------ECIADNVD 556



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 162/313 (51%), Gaps = 1/313 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A+ +F+     G  + V+ +++LIS   R G  + A  +F+ +    L P+  TY
Sbjct: 308 GKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTY 367

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
            A+ID   K G +      + ++M   GV   ++ FN+L+    R G+ + A  +++ M 
Sbjct: 368 GALIDGVCKVG-EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVME 426

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +G   D+FT NT+     +  + D A + +  M    +  + V+Y+ +ID Y K G ++
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE 486

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A  +F EM   G+  + ++YN ++  Y K G+ +EA  +   ME++G+  D+ TY +L+
Sbjct: 487 EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G       DE  R+F +M    +  N +TY+ +I   SK G   EA  ++ E K+ G  
Sbjct: 547 HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYT 606

Query: 507 ADVVLYSALIDAL 519
            D  +Y+ALI ++
Sbjct: 607 IDNKVYTALIGSM 619



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 198/447 (44%), Gaps = 28/447 (6%)

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G++E    +F+ MV +G+  D  +    L A  K  ++DL  EI   M    +   V + 
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +++G  + G ++ +  +  E    GI  +  +YNT+++ Y K   F     V K M+ 
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G+  + VTY  L+    K GK  +  ++F++M+   +  ++  Y++LI    + G  K 
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A  +F E  + GL      Y ALID +CK G + +A  L++EM  +G+    V +N++ID
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407

Query: 553 AFGRSATTE--CTVDDVERDLGKQKE--SANLDAMCSQDDKDVQEAG----RTDNQIIKV 604
            + R    +    + DV    G Q +  + N  A C    K   EA     R     +K+
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL 467

Query: 605 ----FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
               +  L+     +G  E   R        +F +M    ++PN +T++ ++ A  +   
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKR--------LFVEMSSKGVQPNAITYNVMIYAYCKQGK 519

Query: 661 FEDASMLLEELRLF----DNQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAF 715
            ++A  L   +       D+  Y  + HG  +   DN+  +A+ LF E+ L      S  
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIA--DNVD-EAMRLFSEMGLKGLDQNSVT 576

Query: 716 YNALTDMLWHFGQKRGAQLVVLEGKRR 742
           Y  +   L   G+   A  +  E KR+
Sbjct: 577 YTVMISGLSKAGKSDEAFGLYDEMKRK 603



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 54/264 (20%), Positives = 105/264 (39%), Gaps = 33/264 (12%)

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
           VY   G+++E +++F    + GL  D       + A  K   ++  + +   M   G++ 
Sbjct: 163 VYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKI 222

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII 602
            V +   +++         C   +VE+     KE +          K ++    T N II
Sbjct: 223 TVYSLTIVVEGL-------CRRGEVEKSKKLIKEFSV---------KGIKPEAYTYNTII 266

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
             +   V ++   G            + GV + M K  +  N VT++ ++    +     
Sbjct: 267 NAY---VKQRDFSG------------VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMS 311

Query: 663 DASMLLEELRL--FDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALT 720
           DA  L +E+R    ++ V+     +    R     +A  LFDE+     S +S  Y AL 
Sbjct: 312 DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371

Query: 721 DMLWHFGQKRGAQLVVLEGKRRQV 744
           D +   G+   A++++ E + + V
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGV 395


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 228/452 (50%), Gaps = 29/452 (6%)

Query: 114 KIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYT---FLLRELGNRG 170
           K+    +  V AE    HV +F   +V L  +L +     C A  Y    + L  + ++G
Sbjct: 44  KVRNPQKVRVSAETRQTHVLSFDFKEVHLMKLLNRS----CRAGKYNESLYFLECMVDKG 99

Query: 171 EWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYA 230
                I C    +K      + GK A+ ++ IL R GK D                 V+A
Sbjct: 100 YTPDVILCTKL-IKGFFNSRNIGK-ATRVMEILERYGKPD-----------------VFA 140

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           ++ALIS + ++   + A  V + MK     P++VTYN +I + C +G +D    +EIF++
Sbjct: 141 YNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDL--ALEIFEE 198

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           +L++  +P  IT+  L+      G  + A  L +EM+ +G++ D  TYN ++  +CK   
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D AFE++  + ++   P+++TY+ ++      G+  +   + SEM  +G   + V+++ 
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSI 318

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    + G+ EEA+ + + M+  G++ DA  Y+ L+ G+ ++G+ D      E M +D 
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P+++ Y+T++    + G   +A+++F +  + G   +V  Y+ L  AL  +G    A+
Sbjct: 379 CLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRAL 438

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            ++ ++  +GI P+ +TYNS+I    R    +
Sbjct: 439 EMILKLLNQGIDPDEITYNSLISCLCRDGMVD 470



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 177/361 (49%), Gaps = 3/361 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI      GK+DLA  IFE  L +    TV  ++ LI A    G    A+ + + M    
Sbjct: 179 MIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKG 238

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           L+P+ +TYNA+I   C +  VD     E+   +   G +PD IT+N LL      G W  
Sbjct: 239 LEPDTLTYNAIIRGMCKEMMVD--KAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSE 296

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
              L +EM+  G   ++ T++ L+  +C+  +++ A  ++  M  K + P+   Y  +I 
Sbjct: 297 GEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIA 356

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+ + GRLD A      M   G   D V+YNT+++   + G+ ++AL V ++++  G   
Sbjct: 357 GFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPP 416

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +  +YN L       G       M  ++    + P+ +TY++LI    + G+  EA+++ 
Sbjct: 417 NVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELL 476

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            + +    + +VV Y+ ++  LCK      A+ +L  MT++G +PN  TY  +I+  G S
Sbjct: 477 VDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFS 536

Query: 558 A 558
            
Sbjct: 537 G 537



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 209/449 (46%), Gaps = 34/449 (7%)

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV---VEIFDDM 290
           L++   R+G   E++     M      P+++    +I    KG  + +++     + + +
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLI----KGFFNSRNIGKATRVMEIL 130

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
            R G +PD   +N+L++   +    E A  + + M  RG   D+ TYN ++ + C   ++
Sbjct: 131 ERYG-KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKL 189

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           DLA EI  E+   N  P V+TY+ +I+     G +D A+ +  EM   G+  D ++YN +
Sbjct: 190 DLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAI 249

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +    K    ++A  + + + S G + D +TYN LL     +GK+ E  ++  +M +   
Sbjct: 250 IRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGC 309

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            PN++T+S LI    + G  +EA+ + R  K+ GLK D   Y  LI   C+ G ++ A  
Sbjct: 310 KPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATE 369

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKESANLD----AMC 584
            L+ M  +G  P++V YN+I+    R+   +  ++  E+  ++G     ++ +    A+ 
Sbjct: 370 FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALW 429

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI---------LGVFQK 635
           S  D+      R    I+K+  Q      G    E      I C+         + +   
Sbjct: 430 SSGDR-----YRALEMILKLLNQ------GIDPDEITYNSLISCLCRDGMVDEAIELLVD 478

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           M   + +PNVV+++ IL    + N   DA
Sbjct: 479 MQSGRYRPNVVSYNIILLGLCKVNRANDA 507



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 127/297 (42%), Gaps = 42/297 (14%)

Query: 415 AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ---GKYDEVRRMFEQMKADCVS 471
            + G++ E+L   + M   G   D +    L+ G+      GK   V  + E+       
Sbjct: 80  CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG----K 135

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P++  Y+ LI  + K    + A ++    K  G   DVV Y+ +I + C  G ++ A+ +
Sbjct: 136 PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEI 195

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
            +E+ K+   P V+TY  +I+A         T+ D   D+  +     LD M S   K +
Sbjct: 196 FEELLKDNCEPTVITYTILIEA---------TILDGGIDVAMKL----LDEMLS---KGL 239

Query: 592 QEAGRTDNQIIK-VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
           +    T N II+ +  +++ +KA +                + + +     KP+++T++ 
Sbjct: 240 EPDTLTYNAIIRGMCKEMMVDKAFE----------------LLRSLSSRGCKPDIITYNI 283

Query: 651 ILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVK 705
           +L        + +   L+ E+     +   V H +L+G   RD    +A++L   +K
Sbjct: 284 LLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMK 340


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 196/353 (55%), Gaps = 6/353 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISV-FNSMKRYNLKP 261
           L R+GKVD A+ +     N    NTV  ++ LI+ Y  SG  +EA  + + +M     +P
Sbjct: 315 LCRMGKVDEARAMLSKIPNP---NTVL-YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +  T+N +ID   K G      +E  D+M++ G +P+ IT+  L+    + G +E A  +
Sbjct: 371 DAFTFNIMIDGLCKKGY-LVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKV 429

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            N M  +G+  +   YN L+ A+CK  ++  A ++  EM +K   P++ T++++I G  K
Sbjct: 430 VNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCK 489

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
             ++++AL ++ +M   G+  + V+YNT++  + +L   ++A  +  EM   G   D +T
Sbjct: 490 NDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNIT 549

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN L+    K G  ++   + EQM  + + P++ + + LI+ + + G   +A+Q  R+  
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           Q GL  D+V Y++LI+ LCK G  + A++L + +  +GI P+ VTYN++I  +
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRY 662



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 219/472 (46%), Gaps = 39/472 (8%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L    +V+ A  + E     G    V  F+ +I    ++G   EA  + + M   +
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
              + +    ++   C  G VD          ML     P+ + +N+L+      G +E 
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARA------MLSKIPNPNTVLYNTLINGYVVSGRFEE 354

Query: 318 ARNL-FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           A++L +  MV  G + D FT+N ++D +CK   +  A E + EM  K   PNV+TY+ +I
Sbjct: 355 AKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILI 414

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG+ K G  ++A  + + M   G+ L+ V YN ++    K G+ ++AL +  EM S G +
Sbjct: 415 DGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCK 474

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  T+N+L+ G  K  K +E   ++  M  + V  N +TY+TLI  + +  L ++A ++
Sbjct: 475 PDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKL 534

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             E +  G   D + Y+ LI ALCK G  E  + L+++M  E I P++ + N +I++F R
Sbjct: 535 VGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCR 594

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
           +                       DA+  Q  +D+ + G T +  I  +  L+      G
Sbjct: 595 TGKVN-------------------DAL--QFLRDMIQRGLTPD--IVTYNSLINGLCKMG 631

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
           + +          L +F  +    I P+ VT++ +++       F DA  LL
Sbjct: 632 RFQEA--------LNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLL 675



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 220/492 (44%), Gaps = 36/492 (7%)

Query: 209 VDLAKNIFETA-LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           V  + ++FE A L  GY ++ + +  LI   G  G  +    +   MK          + 
Sbjct: 74  VPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFI 133

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            ++   GK G+  +    + D       +P   ++N +L +   G   + A N+F +M+ 
Sbjct: 134 LIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLS 193

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           RGI   ++T+  ++ A C   ++D A  ++ +M      PN + Y  +I   ++  R+++
Sbjct: 194 RGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNE 253

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A+ +  EM  +G   D  ++N V+    K GR  EA  +   M       DA+    L+ 
Sbjct: 254 AMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMH 313

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ-IFREFKQAGLK 506
           G  + GK DE R M  ++     +PN + Y+TLI+ Y   G ++EA   +++    AG +
Sbjct: 314 GLCRMGKVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFE 369

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            D   ++ +ID LCK G + SA+  LDEM K+G  PNV+TY  +ID F +    E     
Sbjct: 370 PDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFE-EASK 428

Query: 567 VERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQI--------IKVFGQLVAE 611
           V   +  +  S N       + A+C   D  +Q+A +   ++        I  F  L+  
Sbjct: 429 VVNSMSAKGLSLNTVGYNCLIGALCK--DGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                K E          LG+++ M    +  N VT++ +++A  R    + A  L+ E+
Sbjct: 487 LCKNDKMEEA--------LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM 538

Query: 672 RL----FDNQVY 679
           R      DN  Y
Sbjct: 539 RFRGCPLDNITY 550



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/526 (25%), Positives = 235/526 (44%), Gaps = 70/526 (13%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRY 257
           +I  LG +G+  +   + +   +EG       F  ++  YG++G   +A  +   M   Y
Sbjct: 100 LIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVY 159

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             +P   +YN V++    G    K    +F DML  G+ P   TF  ++         ++
Sbjct: 160 CFEPTFKSYNVVLEILVAGNCP-KVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDS 218

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A +L  +M   G   +   Y  L+ A+ +  +++ A +++ EM      P+V T++ +I 
Sbjct: 219 ACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIH 278

Query: 378 GYAKAGRLDDALNMFSEM------------KFLGIGLDR-------------------VS 406
           G  KAGR+ +A  +   M             +L  GL R                   V 
Sbjct: 279 GLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVL 338

Query: 407 YNTVLSIYAKLGRFEEAL-LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           YNT+++ Y   GRFEEA  L+ K M  +G   DA T+N ++ G  K+G         ++M
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
                 PN++TY+ LID + K G ++EA ++       GL  + V Y+ LI ALCK+G +
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           + A+ +  EM+ +G +P++ T+NS+I          C  D +E  LG  ++   L+ + +
Sbjct: 459 QDALQMYGEMSSKGCKPDIYTFNSLIYGL-------CKNDKMEEALGLYRDML-LEGVIA 510

Query: 586 QDDKDVQEAGRTDNQIIKVFGQL-VAEKAGQGKKENRCRQ------------EILC---- 628
                      T N +I  F +L + ++A +   E R R             + LC    
Sbjct: 511 NT--------VTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGA 562

Query: 629 ---ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               LG+ ++M   +I P++ + + ++N+  R     DA   L ++
Sbjct: 563 TEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDM 608



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 149/299 (49%), Gaps = 3/299 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+     +G + +A +       +    N  G   + +I  L + GK+  A  ++  
Sbjct: 410 YTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVG--YNCLIGALCKDGKIQDALQMYGE 467

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             ++G    +Y F++LI    ++   +EA+ ++  M    +  N VTYN +I A  +  +
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +   ++  +M   G   D IT+N L+    + G  E    L  +M    I   I + N
Sbjct: 528 -IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCN 586

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+++ C+  +++ A + + +M  + ++P++VTY+++I+G  K GR  +ALN+F+ ++  
Sbjct: 587 ILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAK 646

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           GI  D V+YNT++S Y   G F +A  +  +  S+G   + +T++ L+  + K     E
Sbjct: 647 GIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSE 705



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 1/161 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L + G  +    + E    E    ++ + + LI+++ R+G   +A+     M +
Sbjct: 551 NGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQ 610

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P++VTYN++I+   K G  F+  + +F+ +   G+ PD +T+N+L++     GL+ 
Sbjct: 611 RGLTPDIVTYNSLINGLCKMG-RFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
            A  L  + V  G   +  T++ L++   K       F I+
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTIL 710



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 38/264 (14%)

Query: 430 MESSGIRKDAV----TYNALLGGYGKQGKYDEVRRMFEQMKAD-CVSPNLLTYSTLIDVY 484
            E +G+++  +     Y  L+   G  G++  + ++ +QMK + CV    L +  ++  Y
Sbjct: 81  FEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESL-FILIMRYY 139

Query: 485 SKGGLYKEAMQIFRE-FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            K GL  +A ++  + +     +     Y+ +++ L      + A ++  +M   GI P 
Sbjct: 140 GKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPT 199

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           V T+  ++ AF       C V++V             D+ CS   +D+ + G   N II 
Sbjct: 200 VYTFGVVMKAF-------CMVNEV-------------DSACSLL-RDMTKHGCVPNSIIY 238

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
              Q++     +  + N   +       + ++M  +  +P+V TF+ +++   +     +
Sbjct: 239 ---QMLIHALSENNRVNEAMK-------LLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHE 288

Query: 664 ASMLLEELRLFDNQVYGVAHGLLM 687
           A+ L + + L D     +  G LM
Sbjct: 289 AAKLHDRMLLRDFTADALIQGYLM 312


>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
          Length = 1438

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 217/416 (52%), Gaps = 8/416 (1%)

Query: 157 DDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF 216
           D+  F++R +G    W +A+  F +  +     +   +  + ++ +LGR  +  +A+ +F
Sbjct: 156 DEVAFVVRAVGE-SSWRRALDAFEWLARSSAPAS---RAVAVVLGVLGRARQDSIAEEVF 211

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
                EG   TV  F+A++  Y RSG   +A  + ++M    + P+LV++N +I+A  K 
Sbjct: 212 LRFAGEG--ATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKS 269

Query: 277 GVDFKHV-VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G     V +++  ++ ++G++PD IT+N+L++ CS+    E A  +F +M+      D++
Sbjct: 270 GCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLW 329

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYN ++    +  + + A  +  E+  K   P+ +TY++++  +AK G +D   +   ++
Sbjct: 330 TYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQL 389

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G   + ++YNT++ +Y K+GR + A+ +  EM + G   DAVTY  ++   GK  + 
Sbjct: 390 VKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRI 449

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            E  ++ E M    + P L+ +S LI  Y+KGG   +A   F     +G+K D + Y  +
Sbjct: 450 AEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVM 509

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           +D   ++G  E  + L  +M  +  RP+   Y  ++ A  +    E  +++V +D+
Sbjct: 510 LDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCE-EIEEVIQDM 564



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 186/395 (47%), Gaps = 42/395 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQE--AISVFNSM 254
           +AM+ +  R G+ D A+ + +T  + G    + +F+ LI+A  +SG      A+ +   +
Sbjct: 225 NAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEV 284

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML----------------------- 291
           ++  L+P+++TYN +I AC +   + +  V +F+DM+                       
Sbjct: 285 RQSGLRPDVITYNTLISACSQSS-NLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGK 343

Query: 292 ------------RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
                         G  PD IT+NSLL   ++ G  +   +   ++V  G  ++  TYNT
Sbjct: 344 AEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNT 403

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++    K  ++DLA  +  EM A   +P+ VTY+ MID   K  R+ +A  +  +M   G
Sbjct: 404 MIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAG 463

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           +    ++++ ++  YAK GR  +A      M +SG++ D + Y  +L  + + G  +++ 
Sbjct: 464 LKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKML 523

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            ++ +M  D   P+   Y  L+   +K    +E  ++ ++ +        ++ + LI A 
Sbjct: 524 CLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLCRMNLGIISTMLIKAR 583

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           C    V     LL +   +G +P++ +  SI++A+
Sbjct: 584 C----VSQGAKLLKKACLQGYKPDIKSLRSIMNAY 614



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 126/568 (22%), Positives = 251/568 (44%), Gaps = 47/568 (8%)

Query: 231  FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI-DACGKGGVDFKHVVEIFDD 289
            + ++IS Y + G+ + A  + +   +  +  N+++   +I +A GK  +      EI   
Sbjct: 713  YESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGK--IKLWQQAEILVK 770

Query: 290  MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
             LR     DR  +N+L+   +  GL+E AR +F+ M+  G    + + N ++ A+    +
Sbjct: 771  GLRQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGR 830

Query: 350  MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            +D  + ++ E+   N   +  T   ++D +AKAG + + + +++ MK  G   +   Y +
Sbjct: 831  LDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRS 890

Query: 410  VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
            ++S+     RF +  L+  EME +G + D    NALL  Y   G +D   +++  +    
Sbjct: 891  MISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAG 950

Query: 470  VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            + P+  TY+TLI +Y +    +E   +  E  + GL   +  Y +L+ A  K  L E A 
Sbjct: 951  LEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQAD 1010

Query: 530  SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
             + +EM  +  + N   Y+ ++  +              R+ G   ++ NL A+  +D  
Sbjct: 1011 QIFEEMRSKSYQLNRSIYHMMMKIY--------------RNAGNHSKAENLLAVMKED-- 1054

Query: 590  DVQEAGRTDNQIIKVFGQL----VAEKAGQGKKENRCRQEILCILGVFQ----------- 634
             ++    T + ++  +G       AE      K +      L    VF            
Sbjct: 1055 GIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHG 1114

Query: 635  -----KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY 689
                 +M +  ++P+   ++  + A S C    DA +LL+ L+   +  + +   LL   
Sbjct: 1115 TTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQ---DCGFDLPIRLLTER 1171

Query: 690  RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVW-ENV 748
              ++  +  +  +E++ ++ S A  F NA+ D+LW F  +  A  +      R ++ +NV
Sbjct: 1172 TPSLLSEIANYLEELEALEDSAALNFVNAVEDLLWAFECRATASRIFQLAVERSIYRDNV 1231

Query: 749  W----SESCLDLHLMSSGAARAMVHAWL 772
            +     +   D   +S+GAA   +  WL
Sbjct: 1232 FRVAQKDWGADFRKLSAGAALVGLTLWL 1259



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 141/616 (22%), Positives = 263/616 (42%), Gaps = 77/616 (12%)

Query: 154 CG-ADDYTFLLRELGNRGEWSKAIQ----CFAFA----VKREERKNDQGKLA-------- 196
           CG A++   L REL  +G    AI      +AFA    V + E   +Q   A        
Sbjct: 341 CGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEIT 400

Query: 197 -SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + MI + G++G++DLA  +++     G       ++ +I + G+     EA  V   M 
Sbjct: 401 YNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMT 460

Query: 256 RYNLKPNLVTYNAVIDACGKGG--VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
              LKP L+ ++A+I A  KGG   D ++    FD M+ +GV+PDR+ +  +L V +R G
Sbjct: 461 DAGLKPTLIAFSALICAYAKGGRRADAENT---FDCMIASGVKPDRLAYLVMLDVFARSG 517

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             E    L+ +M++     D   Y  LL A+ K  + +   E++ +M       N+   S
Sbjct: 518 DTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELL-CRMNLGIIS 576

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL----LVCKE 429
           TM+    KA  +     +  +    G   D  S  ++++ Y    + EE L     +C+ 
Sbjct: 577 TML---IKARCVSQGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECICEH 633

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           +  S   +D ++  +++    KQ       +  +++       N   Y  LI    +   
Sbjct: 634 VSFS---QDLISECSIMLLCRKQTSISAYEQYSQRLMLKYPDQNCNLYEYLITCLIEAEF 690

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
           + EA Q+F + +  G++A   +Y ++I   CK G  E+A  L+D+  + GI  N+++   
Sbjct: 691 FSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRV 750

Query: 550 -IIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
            II+A+G+              L +Q E            K +++A   D +I       
Sbjct: 751 IIIEAYGKI------------KLWQQAEILV---------KGLRQASGIDRRIWNALIHA 789

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
            AE     K              VF  M K    P V + + ++ A       ++  +++
Sbjct: 790 YAESGLYEKAR-----------AVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVV 838

Query: 669 EELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAF------YNALTDM 722
           EEL+  + ++      LL+    + + +A  +F+ +K+ +   A+ +      Y ++  +
Sbjct: 839 EELQDMNFKISKSTVLLLL----DAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISL 894

Query: 723 LWHFGQKRGAQLVVLE 738
           L H  + R  +L++ E
Sbjct: 895 LCHHNRFRDVELMIAE 910



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/360 (23%), Positives = 158/360 (43%), Gaps = 1/360 (0%)

Query: 194  KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
            ++ +A+I      G  + A+ +F+  +  G   TV + + ++ A    G   E   V   
Sbjct: 781  RIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEE 840

Query: 254  MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            ++  N K +  T   ++DA  K G D   V++I++ M   G  P+   + S++++     
Sbjct: 841  LQDMNFKISKSTVLLLLDAFAKAG-DVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHN 899

Query: 314  LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             +     +  EM   G   D+   N LL+        D   ++   +    + P+  TY+
Sbjct: 900  RFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYN 959

Query: 374  TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            T+I  Y ++ R ++   + +EM   G+     SY ++L+  AK    E+A  + +EM S 
Sbjct: 960  TLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSK 1019

Query: 434  GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
              + +   Y+ ++  Y   G + +   +   MK D + P + T   L+  Y   G  +EA
Sbjct: 1020 SYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREA 1079

Query: 494  MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
              +    K + L+   + YS + DA  KNG      + L EM ++G+ P+   +   I A
Sbjct: 1080 ENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRA 1139



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 137/315 (43%), Gaps = 1/315 (0%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            ++    + G V     I+      GY   ++ + ++IS        ++   +   M+   
Sbjct: 856  LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAG 915

Query: 259  LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             KP+L   NA+++     G +F    +++  +L  G++PD  T+N+L+ +  R    E  
Sbjct: 916  FKPDLAILNALLNMYTAAG-NFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEG 974

Query: 319  RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
              L NEM  RG+   + +Y +LL A  K    + A +I  EM +K+   N   Y  M+  
Sbjct: 975  FTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKI 1034

Query: 379  YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
            Y  AG    A N+ + MK  GI     + + +++ Y   G+  EA  V   ++SS +   
Sbjct: 1035 YRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVS 1094

Query: 439  AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
             + Y+ +   Y K G Y+       +MK D V P+   ++  I   S      +A+ + +
Sbjct: 1095 TLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLK 1154

Query: 499  EFKQAGLKADVVLYS 513
              +  G    + L +
Sbjct: 1155 SLQDCGFDLPIRLLT 1169



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 123/251 (49%), Gaps = 34/251 (13%)

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE--AMQIFR 498
            +NA++G Y + G++D+ R++ + M    + P+L++++TLI+  SK G      A+ +  
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLF 282

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E +Q+GL+ DV+ Y+ LI A  ++  +E AV++ ++M     RP++ TYN+++   GR  
Sbjct: 283 EVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCG 342

Query: 559 TTE------------------CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
             E                   T + +     K+     ++  C Q    + +AG   N+
Sbjct: 343 KAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQ----LVKAGFKKNE 398

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           I   +  ++      G+ +          +G++ +M  +   P+ VT++ ++++  + N 
Sbjct: 399 I--TYNTMIHMYGKMGRLD--------LAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNR 448

Query: 661 FEDASMLLEEL 671
             +A  +LE++
Sbjct: 449 IAEAGKVLEDM 459


>gi|218194011|gb|EEC76438.1| hypothetical protein OsI_14128 [Oryza sativa Indica Group]
          Length = 669

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 156/601 (25%), Positives = 275/601 (45%), Gaps = 58/601 (9%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGG----LWEAARNLFNEMVHR---GIDQDIFTYNTLLD 342
           M  +GV P   T+N++LA C+R       ++    LF EM H     +  D+ TYNTLL 
Sbjct: 1   MKASGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDPSPSVRPDLTTYNTLLA 60

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A    A  D +  ++  M    + P+  +Y  ++D +A AG L     +F+EM   G   
Sbjct: 61  AAAVRALSDQSEMLLRTMLEAGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMAATGHTP 120

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D  +Y  ++  + ++G   EA+ V ++M++ G    A TY  LL  YG+QG++D VR +F
Sbjct: 121 DPSAYLGLMEAHTRVGATAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELF 180

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +M+   V P+  TY+ L  V+  GG +KE +++F++   + ++ D+     ++ A  + 
Sbjct: 181 REMRT-TVPPDTATYNVLFRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRG 239

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC------------------TV 564
           GL E A  +LD +T EG+ P    Y  +++A G +A  E                   T 
Sbjct: 240 GLHEDAREVLDYITTEGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETY 299

Query: 565 DDVERDLGK----QKESANLDAMCS----QDDKDVQEA-------GRTDNQIIKVFGQLV 609
           + +     K    Q+  A    M +    Q DKD  +A       G   +  +K + ++ 
Sbjct: 300 NALANAFAKGGLFQEAEAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMR 359

Query: 610 AEKAGQGKKENRCRQEILCILGV-------FQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
             +    ++         CI GV       F+++  +   P+++ +  +L+  +R + + 
Sbjct: 360 KSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWT 419

Query: 663 DASMLLEELRL-FDNQVYGVAHGLLMGYRDNI--WVQALSLFDEVKLMDSSTASAFYNAL 719
           DA  LLEE++    +  + V   ++ G  D+   W     + D   L     +  F+NAL
Sbjct: 420 DAYDLLEEMKTNRASSTHQVIASMIKGEYDDDSNWQMVEYVLDNSNLEGCDYSLRFFNAL 479

Query: 720 TDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL----DLHLMSSGAARAMVHAWLLNI 775
            D+LW FGQK  A  V+ +  +  ++  ++ ++ L    D+H MS G +   V  WL  +
Sbjct: 480 LDVLWWFGQKGRAARVLDQALKYGLFPELFRDTKLVWSADVHRMSVGGSLVAVSVWLNKL 539

Query: 776 HSIVFEGHELPKLLS--ILTGWGKHSKVVGDGALRRAVEVLLTG-MGAPFWVANCNLGRF 832
           +  +    +LP+L S  +L G  + S V     + + V   L   + + F     N GR 
Sbjct: 540 YDRLKGDEDLPQLASVVVLRGQMEKSTVTRGLPIAKVVYSFLNDTLSSSFHYPKWNKGRI 599

Query: 833 I 833
           I
Sbjct: 600 I 600



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 144/301 (47%), Gaps = 9/301 (2%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R+G    A  +      +G   T   +  L+  YGR G       +F  M R  + P+  
Sbjct: 134 RVGATAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELFREM-RTTVPPDTA 192

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TYN +    G GG  FK VVE+F DML + V+PD  T  +++  C RGGL E AR + + 
Sbjct: 193 TYNVLFRVFGDGGF-FKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLDY 251

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMD---LAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           +   G+      Y  L++A+   A  +   +AF +M E+ +    P + TY+ + + +AK
Sbjct: 252 ITTEGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSL---PTIETYNALANAFAK 308

Query: 382 AGRLDDALNMFSEM-KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
            G   +A  +FS M     I  D+ S++ ++  Y +  + ++A+    EM  S    D  
Sbjct: 309 GGLFQEAEAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDER 368

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           +   +L  Y   G  DE +  FE++++    P+++ Y  ++ +Y++   + +A  +  E 
Sbjct: 369 SLEGVLNAYCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEM 428

Query: 501 K 501
           K
Sbjct: 429 K 429



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 155/330 (46%), Gaps = 3/330 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +     +F      G+     A+  L+ A+ R G   EA++V   M+     P   TY
Sbjct: 101 GNLSRVAELFAEMAATGHTPDPSAYLGLMEAHTRVGATAEAVAVLRQMQADGCPPTAATY 160

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
             ++D  G+ G  F  V E+F +M R  V PD  T+N L  V   GG ++    LF +M+
Sbjct: 161 RVLLDLYGRQG-RFDGVRELFREM-RTTVPPDTATYNVLFRVFGDGGFFKEVVELFQDML 218

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
           H  ++ DI T   ++ A  +G   + A E++  +  + + P    Y+ +++    A   +
Sbjct: 219 HSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTGLVEALGHAAMYE 278

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM-ESSGIRKDAVTYNAL 445
           +A   F+ M  +G      +YN + + +AK G F+EA  +   M  ++ I+KD  +++AL
Sbjct: 279 EAYVAFNMMTEIGSLPTIETYNALANAFAKGGLFQEAEAIFSRMTNNAAIQKDKDSFDAL 338

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +  Y +  + D+  + + +M+    +P+  +   +++ Y   G+  E+ + F E +    
Sbjct: 339 IEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSMVT 398

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEM 535
              ++ Y  ++    +N     A  LL+EM
Sbjct: 399 VPSIIAYCMMLSLYARNDRWTDAYDLLEEM 428



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 133/306 (43%), Gaps = 3/306 (0%)

Query: 250 VFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC 309
           +  +M    + P+  +Y  ++DA    G +   V E+F +M   G  PD   +  L+   
Sbjct: 74  LLRTMLEAGVLPDTASYRHIVDAFAGAG-NLSRVAELFAEMAATGHTPDPSAYLGLMEAH 132

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
           +R G    A  +  +M   G      TY  LLD   +  + D   E+  EM    + P+ 
Sbjct: 133 TRVGATAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELFREM-RTTVPPDT 191

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
            TY+ +   +   G   + + +F +M    +  D  +   V+    + G  E+A  V   
Sbjct: 192 ATYNVLFRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLDY 251

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           + + G+   A  Y  L+   G    Y+E    F  M      P + TY+ L + ++KGGL
Sbjct: 252 ITTEGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKGGL 311

Query: 490 YKEAMQIF-REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
           ++EA  IF R    A ++ D   + ALI+A C+   ++ AV    EM K    P+  +  
Sbjct: 312 FQEAEAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLE 371

Query: 549 SIIDAF 554
            +++A+
Sbjct: 372 GVLNAY 377



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 4/239 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L R  G+ G + + ++ F   +   E + D     + M++  GR G  + A+ + + 
Sbjct: 194 YNVLFRVFGDGGFFKEVVELFQ-DMLHSEVEPDIDTCENVMVAC-GRGGLHEDAREVLDY 251

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              EG   T  A++ L+ A G +   +EA   FN M      P + TYNA+ +A  KGG+
Sbjct: 252 ITTEGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKGGL 311

Query: 279 DFKHVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            F+    IF  M  N  +Q D+ +F++L+    +G   + A   + EM     + D  + 
Sbjct: 312 -FQEAEAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSL 370

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
             +L+A C    +D + E   E+ +    P+++ Y  M+  YA+  R  DA ++  EMK
Sbjct: 371 EGVLNAYCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMK 429


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 176/332 (53%), Gaps = 7/332 (2%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKR--YNLKPNLVTYNAVIDA-CGKGGVDFKHVV 284
           V   + ++    +SG  QEA++         +   PN VTYN +IDA C  G +   +  
Sbjct: 209 VVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAY-- 266

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE--MVHRGIDQDIFTYNTLLD 342
           E+ + M   GV  + +T N+++    R G   AA   F E   V      +  TY+TL+ 
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVG 326

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A+     + +A E+  E  ++  SP+ + Y TMI G  +AGRL+DA +M S MK  G  L
Sbjct: 327 ALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKL 386

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D  +YN +++ + +  R  EA  + +EM+  GIR D  TYN LL G  K G +  V  + 
Sbjct: 387 DTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELL 446

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +M  D   P+++T+ TL+  Y K G   EA++I R   ++G+  + V+Y+ LID LCK 
Sbjct: 447 GKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKR 506

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           G V+ A+ L DEM ++ +  NV T+N+++   
Sbjct: 507 GDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 179/366 (48%), Gaps = 13/366 (3%)

Query: 198 AMISILGRLGKV-DLAKNIFETALNEGYGNT---VYAFSALISAYGRSGYCQEAISVFNS 253
           A  SIL  L +V D+       AL +G  +    V  +  L++   ++G   +A+ V + 
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDG 197

Query: 254 MKRYNL--KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLR-NGVQPDRITFNSLLAVCS 310
           M R +L  +P++VT N V+D   K G   + +  +   M   +G  P+ +T+N L+    
Sbjct: 198 MSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC 257

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP--- 367
           R G    A  L  +M + G+ Q+I T NT++  +C+  +   A E   E   + + P   
Sbjct: 258 RVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGK 315

Query: 368 -NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
            N VTYST++        +  A+ +F E    G   D + Y T++S   + GR E+A  +
Sbjct: 316 GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSM 375

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
              M+ +G + D   YN L+ G+ ++ +  E   + ++MK   + P++ TY+TL+    K
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCK 435

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G +    ++  +    G +  V+ +  L+   CK G ++ A+ +L  M + GI PN V 
Sbjct: 436 AGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVI 495

Query: 547 YNSIID 552
           YN++ID
Sbjct: 496 YNTLID 501



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 155/325 (47%), Gaps = 3/325 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    R+G + +A  + E   NEG    +   + ++    R+G    A+  F   + 
Sbjct: 250 NCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRT 309

Query: 257 Y--NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
                K N VTY+ ++ A      +    +E+F + +  G  PD I + ++++  ++ G 
Sbjct: 310 VWPEGKGNAVTYSTLVGALLHTN-NVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGR 368

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E A ++ + M   G   D   YN L+   C+  ++  A+E++ EM    I P+V TY+T
Sbjct: 369 LEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNT 428

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++ G  KAG       +  +M   G     +++ T++  Y K+G+ +EAL + + M+ SG
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I  + V YN L+    K+G  D    +F++MK   V  N+ T++ L+       + ++A 
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAF 548

Query: 495 QIFREFKQAGLKADVVLYSALIDAL 519
           ++  + ++     D V    L++ L
Sbjct: 549 ELMDQMREERCFPDYVTVDVLMEWL 573



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 191/429 (44%), Gaps = 44/429 (10%)

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPA-KNISPNVVTYSTMIDGYAKAGRLDDALNM 391
           D+F +N++L A+ +   +     I A M    ++ P+VVTY  +++G  KAGR+ DAL +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 392 FSEM--KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS--GIRKDAVTYNALLG 447
              M  + L I  D V+ NTV+    K GR +EAL   ++  SS  G   + VTYN L+ 
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL-- 505
            + + G       + E+M+ + V  N++T +T++    + G    A++ FRE +      
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           K + V YS L+ AL     V  A+ L  E   EG  P+ + Y ++I              
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGL----------- 363

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQEAG-RTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                     ++  L+  CS     ++EAG + D    K +  L+A           CR+
Sbjct: 364 ---------TQAGRLEDACSMASS-MKEAGFKLDT---KAYNILIA---------GFCRK 401

Query: 625 EILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH 683
           + L     + Q+M ++ I+P+V T++ +L+   +   F     LL ++     Q   +  
Sbjct: 402 KRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITF 461

Query: 684 GLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKR 741
           G L+ GY +     +AL +   +        +  YN L D L   G    A  +  E K 
Sbjct: 462 GTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKE 521

Query: 742 RQVWENVWS 750
           + V  NV +
Sbjct: 522 KSVPANVTT 530


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 171/664 (25%), Positives = 287/664 (43%), Gaps = 137/664 (20%)

Query: 39  SRPHWTSHKVSLTK--PPLSPSPRNAPKPAATSTTVAPNPKPFHSLSPLPSSKSELAPDF 96
           SRP+W  H  SL K  P L+PS          S+  A N  P  +LS    +   L P F
Sbjct: 49  SRPNWQKHP-SLRKLLPSLTPS--------HVSSLFAFNLDPQTALSFF--NWIALRPGF 97

Query: 97  SGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKL--- 153
                                  +H+V +  ++ ++   AR    L  + +K    +   
Sbjct: 98  -----------------------KHNVHSYSSMLNILIRAR----LLGVAEKIRISMIKS 130

Query: 154 -CGADDYTFLL---RELGNRGEWS--KAIQCFAFAVKREERKNDQGKLASAMISILGRLG 207
            C  +D  F+L   R++   GE+     ++C+                 + ++  L +  
Sbjct: 131 CCSIEDVLFVLEVFRKMNADGEFKFKPTLRCY-----------------NTILMSLSKFL 173

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
            +D  K ++   LN      +Y F+A+++ Y + G   EA    + + +  L P+  TY 
Sbjct: 174 LIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYT 233

Query: 268 AVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA-------- 317
           ++I   C   GVD  +  E+F  M + G Q + +++ +L+  +C  G + EA        
Sbjct: 234 SLILGHCRNKGVD--NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMT 291

Query: 318 --------------------------ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
                                     A NLFNEM  +G + ++ TY  L+D +CK  +MD
Sbjct: 292 EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMD 351

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A ++++EM  K + P+VVTY+ +IDGY K G +DDA  +   M+    G +  +YN ++
Sbjct: 352 EARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
               K  +  +A+ +  +M    +    +TYN+L+ G  K    +   R+   M  + + 
Sbjct: 412 CGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV 471

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P+  TYS  ID   K G  +EA  +F   K  G+KA+ V+Y+ALID  CK G ++ A SL
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA-MCSQDDKD 590
           L+ M  +   PN  TYN +I+   +                K KE+++L A M +   K 
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEK--------------KMKEASSLVAKMLTMGVKP 577

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
                      +  +  L+ E    G  ++         L VF  M  L  +P+V T++A
Sbjct: 578 T----------VVTYTILIGEMLKDGAFDHA--------LKVFNHMVSLGYQPDVCTYTA 619

Query: 651 ILNA 654
            L+A
Sbjct: 620 FLHA 623



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 141/565 (24%), Positives = 254/565 (44%), Gaps = 53/565 (9%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L   G  ++A++ FA     E+      +  + +I  L   G+   A N+F  
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMT--EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNE 324

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
              +G    V+ ++ LI    +     EA  + + M    L P++VTYNA+ID  C +G 
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D     EI D M  N   P+  T+N L+    +      A  L N+M+ R +   + TY
Sbjct: 385 ID--DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITY 442

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N+L+   CK   ++ A+ +++ M    + P+  TYS  ID   K GR+++A  +F  +K 
Sbjct: 443 NSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKA 502

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  + V Y  ++  Y K+G+ + A  + + M +     ++ TYN L+ G  K+ K  E
Sbjct: 503 KGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKE 562

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +  +M    V P ++TY+ LI    K G +  A+++F      G + DV  Y+A + 
Sbjct: 563 ASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLH 622

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT-------ECTVD----- 565
           A    G++E    ++ +M +EGI P++VTY  +ID + R   T       +C VD     
Sbjct: 623 AYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKP 682

Query: 566 ------------DVERDLGKQKESANLDAMCSQDDKDVQ--------EAGRTDNQIIKVF 605
                         E  + + +    +D++ +  + ++         E G T +  + ++
Sbjct: 683 SLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTID--VSIY 740

Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
           G L+A    Q + E           G+   M +  + P+   ++++L+ C +   + +A 
Sbjct: 741 GALIAGFCQQERLEEA--------QGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEA- 791

Query: 666 MLLEELRLFDNQVYGVAHGLLMGYR 690
                +RL D  V      LL  Y+
Sbjct: 792 -----VRLVDAMVENGLLPLLESYK 811



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 185/417 (44%), Gaps = 21/417 (5%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+  +  L   G   +A   F     +  + N+   + +A+I    ++GK+D+A ++ E 
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEV--IYTALIDGYCKVGKIDVAYSLLER 534

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            LN+      Y ++ LI    +    +EA S+   M    +KP +VTY  +I    K G 
Sbjct: 535 MLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGA 594

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            F H +++F+ M+  G QPD  T+ + L      G+ E   ++  +M   GI  D+ TY 
Sbjct: 595 -FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYT 653

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD----------- 387
            L+D   +      AF+ +  M      P++   S +I   +   R+ +           
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVS 713

Query: 388 -------ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
                  AL +F +M   G  +D   Y  +++ + +  R EEA  +   M+  G+     
Sbjct: 714 NTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSED 773

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
            YN+LL    K G Y E  R+ + M  + + P L +Y  L+      G  ++A  +F   
Sbjct: 774 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGL 833

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
              G   D V +  LID L K  LV+    L+D M ++G +PN +TY+ +I+   R+
Sbjct: 834 LSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLERT 890



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 214/467 (45%), Gaps = 57/467 (12%)

Query: 280 FKHVVEIFDDMLRNGVQP------DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           FKH V  +  ML   ++       ++I  + + + CS   +      LF   V R ++ D
Sbjct: 97  FKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDV------LFVLEVFRKMNAD 150

Query: 334 --------IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
                   +  YNT+L ++ K   +D    +  E+    ISPN+ T++ M++GY K G +
Sbjct: 151 GEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNV 210

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            +A    S++   G+  D  +Y +++  + +    + A  V   M   G +++ V+Y  L
Sbjct: 211 VEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNL 270

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  + G+ +E  ++F  M  D   P + TY+ LI   S  G   EA+ +F E K+ G 
Sbjct: 271 IHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGC 330

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           + +V  Y+ LID LCK   ++ A  +L EM+++G+ P+VVTYN++ID + +    E  +D
Sbjct: 331 EPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCK----EGMID 386

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
           D    L   + ++     C  +        RT N++I           G  KK    +  
Sbjct: 387 DAFEILDLMESNS-----CGPNT-------RTYNELI----------CGLCKKRKVHKA- 423

Query: 626 ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL----EELRLFDNQVYGV 681
               + +  KM + K+ P+++T++++++   + N  E A  LL    E   + D   Y V
Sbjct: 424 ----MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479

Query: 682 AHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
               L   ++    +A +LFD VK          Y AL D     G+
Sbjct: 480 FIDTLC--KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524


>gi|168052517|ref|XP_001778696.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669911|gb|EDQ56489.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 799

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 231/478 (48%), Gaps = 36/478 (7%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEG-YGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           A+IS + R G ++ +  +F    N+  Y      ++ +I  + R     +A  +F  MK 
Sbjct: 56  ALISEITRTGALEHSLRVFNWMKNQKCYRARTDIYNCMIWLHARHQRADQARGLFYEMKV 115

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLR--NGVQPDRITFNSLLAVCSRGGL 314
           +  KP++ TYNA+++  G+ G  ++  ++IFDDML+    + P R ++N+L+  C   G 
Sbjct: 116 WRCKPDVETYNALMNVHGRAG-QWRWALQIFDDMLQAPKPIAPSRSSYNNLINACGSSGQ 174

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           W  A  +   M   G+  D+ TYN +L A   G Q   A      + +K +  +  +++ 
Sbjct: 175 WFKALEICKRMTDNGVGPDLMTYNIILSAFKSGGQPRHAVAYYDHLISKKVPLDRYSHNI 234

Query: 375 MIDGYAKAGRLDDALNMFSEMKFL-GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           +++   K GR +DA+N+F EM+ + G   D V++N +L +YA  G+  +A      M   
Sbjct: 235 ILNCLTKLGRFEDAINLFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFDMMIGE 294

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G+    VT+N LLG Y  QG Y E  ++   +      P++++YS+L++ + K G  ++A
Sbjct: 295 GMAPTIVTFNTLLGAYASQGMYTEALQVVGLLVKAKFEPDVVSYSSLLNAFGKAGYPEKA 354

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            ++F   KQ   K ++V ++ L+DA    G  E A  LL +M +  I PNVVT  S+  A
Sbjct: 355 QEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLHDMAEARIEPNVVTICSLFAA 414

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
             R+   E  V DV  +   ++ + N+ A                N  I  + +     A
Sbjct: 415 CARARCPE-KVRDVFHEAKVRQIALNVPAF---------------NAAITAYIE-----A 453

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           GQ  +             + + M +  ++PN VTF  ++NA      + +A  L +++
Sbjct: 454 GQFDEAK----------ALLEVMEEQNLRPNGVTFLLLINAAGSLGDYREARTLYDKM 501



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 133/552 (24%), Positives = 246/552 (44%), Gaps = 71/552 (12%)

Query: 157 DDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF 216
           + Y  L+   G  G+W  A+Q F   ++  +         + +I+  G  G+   A  I 
Sbjct: 123 ETYNALMNVHGRAGQWRWALQIFDDMLQAPKPIAPSRSSYNNLINACGSSGQWFKALEIC 182

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           +   + G G  +  ++ ++SA+   G  + A++ ++ +    +  +  ++N +++   K 
Sbjct: 183 KRMTDNGVGPDLMTYNIILSAFKSGGQPRHAVAYYDHLISKKVPLDRYSHNIILNCLTKL 242

Query: 277 GVDFKHVVEIFDDMLR-NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G  F+  + +F +M + NG +PD +TFN+LL V +  G    A+  F+ M+  G+   I 
Sbjct: 243 G-RFEDAINLFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFDMMIGEGMAPTIV 301

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           T+NTLL A         A +++  +      P+VV+YS++++ + KAG  + A  +F  M
Sbjct: 302 TFNTLLGAYASQGMYTEALQVVGLLVKAKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDLM 361

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT-------------- 441
           K      + V++N ++  YA  G++E A  +  +M  + I  + VT              
Sbjct: 362 KQRSRKPNLVTFNGLMDAYASAGKYERARELLHDMAEARIEPNVVTICSLFAACARARCP 421

Query: 442 ---------------------YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
                                +NA +  Y + G++DE + + E M+   + PN +T+  L
Sbjct: 422 EKVRDVFHEAKVRQIALNVPAFNAAITAYIEAGQFDEAKALLEVMEEQNLRPNGVTFLLL 481

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I+     G Y+EA  ++ +    G+   V   SALI+A  K+G+   A ++ D+M K G 
Sbjct: 482 INAAGSLGDYREARTLYDKMVDLGIPLTVEPCSALINAFAKHGMYNEARTIFDDMRKAGC 541

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
           + NVVTY S++ A+                  +  + A L        +++  AG T + 
Sbjct: 542 KANVVTYTSLMIAY------------------RMYDDAQLAC------EEMVAAGITPDS 577

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           I   FG L         K NR  +    +L + +      I  + V ++  L ACSR   
Sbjct: 578 I--AFGTLFVAL----NKANRSEK----VLQIEKSSRARGILFDDVAYTETLLACSRLKD 627

Query: 661 FEDASMLLEELR 672
           +E A  L E ++
Sbjct: 628 WETALFLYEGMK 639



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 176/330 (53%), Gaps = 4/330 (1%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V ++S+L++A+G++GY ++A  VF+ MK+ + KPNLVT+N ++DA    G  ++   E+ 
Sbjct: 335 VVSYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAG-KYERARELL 393

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            DM    ++P+ +T  SL A C+R    E  R++F+E   R I  ++  +N  + A  + 
Sbjct: 394 HDMAEARIEPNVVTICSLFAACARARCPEKVRDVFHEAKVRQIALNVPAFNAAITAYIEA 453

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            Q D A  ++  M  +N+ PN VT+  +I+     G   +A  ++ +M  LGI L     
Sbjct: 454 GQFDEAKALLEVMEEQNLRPNGVTFLLLINAAGSLGDYREARTLYDKMVDLGIPLTVEPC 513

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           + +++ +AK G + EA  +  +M  +G + + VTY +L+  Y     YD+ +   E+M A
Sbjct: 514 SALINAFAKHGMYNEARTIFDDMRKAGCKANVVTYTSLMIAYRM---YDDAQLACEEMVA 570

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             ++P+ + + TL    +K    ++ +QI +  +  G+  D V Y+  + A  +    E+
Sbjct: 571 AGITPDSIAFGTLFVALNKANRSEKVLQIEKSSRARGILFDDVAYTETLLACSRLKDWET 630

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           A+ L + M K  +R       +++ A GRS
Sbjct: 631 ALFLYEGMKKRRLRLTNTMVINLLSAVGRS 660



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 191/392 (48%), Gaps = 19/392 (4%)

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
           +++F  A        V AF+A I+AY  +G   EA ++   M+  NL+PN VT+  +I+A
Sbjct: 425 RDVFHEAKVRQIALNVPAFNAAITAYIEAGQFDEAKALLEVMEEQNLRPNGVTFLLLINA 484

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
            G  G D++    ++D M+  G+       ++L+   ++ G++  AR +F++M   G   
Sbjct: 485 AGSLG-DYREARTLYDKMVDLGIPLTVEPCSALINAFAKHGMYNEARTIFDDMRKAGCKA 543

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           ++ TY +L+ A        LA E   EM A  I+P+ + + T+     KA R +  L + 
Sbjct: 544 NVVTYTSLMIAYRMYDDAQLACE---EMVAAGITPDSIAFGTLFVALNKANRSEKVLQIE 600

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
              +  GI  D V+Y   L   ++L  +E AL + + M+   +R        LL   G+ 
Sbjct: 601 KSSRARGILFDDVAYTETLLACSRLKDWETALFLYEGMKKRRLRLTNTMVINLLSAVGRS 660

Query: 453 GKYDEVRRMFEQMKADC-VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           GK D + ++F +++      P L  Y+ LID YS+G  +++ +++    K+  L+ +   
Sbjct: 661 GKLDRLHKVFLELQQQIGFVPTLQMYNILIDSYSRGLKWRKCLEVLGCIKKDILEPNWKT 720

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           Y  ++  L +  L E+ + +  E+  +G+ P+   YN +     + + T  T       L
Sbjct: 721 YEPILSCLSQLELWETYLEIYGEVLAQGMEPD---YNIL-----KISVTAYT------SL 766

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           G ++E++  +A      ++ + A R D ++++
Sbjct: 767 GMEEEASLTEARLQGLRRETKGAVRGDVKLLR 798



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 199/446 (44%), Gaps = 69/446 (15%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           F ALIS   R+G  + ++ VFN MK      N   Y A  D                   
Sbjct: 54  FPALISEITRTGALEHSLRVFNWMK------NQKCYRARTD------------------- 88

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
                      +N ++ + +R    + AR LF EM       D+ TYN L++   +  Q 
Sbjct: 89  ----------IYNCMIWLHARHQRADQARGLFYEMKVWRCKPDVETYNALMNVHGRAGQW 138

Query: 351 DLAFEIMAEM--PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
             A +I  +M    K I+P+  +Y+ +I+    +G+   AL +   M   G+G D ++YN
Sbjct: 139 RWALQIFDDMLQAPKPIAPSRSSYNNLINACGSSGQWFKALEICKRMTDNGVGPDLMTYN 198

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM-KA 467
            +LS +   G+   A+     + S  +  D  ++N +L    K G++++   +F++M K 
Sbjct: 199 IILSAFKSGGQPRHAVAYYDHLISKKVPLDRYSHNIILNCLTKLGRFEDAINLFKEMRKM 258

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
           +   P+++T++ L+ VY+  G   +A + F      G+   +V ++ L+ A    G+   
Sbjct: 259 NGCEPDVVTFNALLHVYALCGQITKAQETFDMMIGEGMAPTIVTFNTLLGAYASQGMYTE 318

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
           A+ ++  + K    P+VV+Y+S+++AFG++   E           K +E  +L       
Sbjct: 319 ALQVVGLLVKAKFEPDVVSYSSLLNAFGKAGYPE-----------KAQEVFDL------- 360

Query: 588 DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
              +++  R  N +   F  L+   A  GK E R R+       +   M + +I+PNVVT
Sbjct: 361 ---MKQRSRKPNLV--TFNGLMDAYASAGKYE-RARE-------LLHDMAEARIEPNVVT 407

Query: 648 FSAILNACSRCNSFEDASMLLEELRL 673
             ++  AC+R    E    +  E ++
Sbjct: 408 ICSLFAACARARCPEKVRDVFHEAKV 433



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 35/268 (13%)

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI-RKDAVTYNALLGGYGKQGKYDEVRR 460
            +R ++  ++S   + G  E +L V   M++    R     YN ++  + +  + D+ R 
Sbjct: 49  FNRKNFPALISEITRTGALEHSLRVFNWMKNQKCYRARTDIYNCMIWLHARHQRADQARG 108

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA--GLKADVVLYSALIDA 518
           +F +MK     P++ TY+ L++V+ + G ++ A+QIF +  QA   +      Y+ LI+A
Sbjct: 109 LFYEMKVWRCKPDVETYNALMNVHGRAGQWRWALQIFDDMLQAPKPIAPSRSSYNNLINA 168

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
              +G    A+ +   MT  G+ P+++TYN I+ AF         V             A
Sbjct: 169 CGSSGQWFKALEICKRMTDNGVGPDLMTYNIILSAFKSGGQPRHAV-------------A 215

Query: 579 NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
             D + S   K V     + N I+    +L       G+ E+         + +F++M K
Sbjct: 216 YYDHLIS---KKVPLDRYSHNIILNCLTKL-------GRFED--------AINLFKEMRK 257

Query: 639 LK-IKPNVVTFSAILNACSRCNSFEDAS 665
           +   +P+VVTF+A+L+  + C     A 
Sbjct: 258 MNGCEPDVVTFNALLHVYALCGQITKAQ 285



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 4/141 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVD-LAKNIFE 217
           YT  L       +W  A+  F +   ++ R      +   ++S +GR GK+D L K   E
Sbjct: 615 YTETLLACSRLKDWETAL--FLYEGMKKRRLRLTNTMVINLLSAVGRSGKLDRLHKVFLE 672

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                G+  T+  ++ LI +Y R    ++ + V   +K+  L+PN  TY  ++ +C    
Sbjct: 673 LQQQIGFVPTLQMYNILIDSYSRGLKWRKCLEVLGCIKKDILEPNWKTYEPIL-SCLSQL 731

Query: 278 VDFKHVVEIFDDMLRNGVQPD 298
             ++  +EI+ ++L  G++PD
Sbjct: 732 ELWETYLEIYGEVLAQGMEPD 752


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 202/348 (58%), Gaps = 5/348 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +  +++   + G+ ++ +S+   M++ N KP++ TY+ VIDA  K  ++    + + ++M
Sbjct: 171 YGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKD-INLDAAINLLNEM 229

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
            +  + P+  T+NSL+    + G WE  + L +EMV+  I+ ++ T++ L+D +CK  ++
Sbjct: 230 KQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKV 289

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           + A E+M  M  K + P+++TYS ++DGY   G++D A  +F+ ++  GI  +  SY+ +
Sbjct: 290 EDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSIL 349

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           ++ Y K     +A+ +  E+   G++ D VTY+ +L G  + G+  + +++F++M     
Sbjct: 350 INGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGP 409

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           +P++  +STL+  Y K GL +EAM +F + ++     ++  Y+ +I+ LCKN  V  A +
Sbjct: 410 TPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHA 469

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
           + +++   G+ P+V TYN +I  F R    E   D+V+  L K +++ 
Sbjct: 470 IFEKLPSIGLIPDVRTYNVMITGFCR----EGLFDEVKGILRKMEDNG 513



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 215/438 (49%), Gaps = 22/438 (5%)

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDACGKGGV----DFKHVVEIFDDMLRNGV-QPDRIT 301
           A SV     +  +  N+VT+N ++     GG+         V +F  ++R  + +P+ + 
Sbjct: 116 AFSVLPIYLKTGIPFNVVTFNTLL-----GGLFAENKVTDAVVLFKKLVREKICEPNEVM 170

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           + +++   S+ G  E   +L   M       D+ TY+ ++DA+CK   +D A  ++ EM 
Sbjct: 171 YGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMK 230

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            KNI PN+ TY+++IDG  K G+ +    + SEM  L I  +  +++ ++    K G+ E
Sbjct: 231 QKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVE 290

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           +A  V + M   G+  D +TY+A++ GY  +G+ D  RR+F  ++   + PN+ +YS LI
Sbjct: 291 DADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILI 350

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           + Y K     +AMQ+F E  Q GLK D V YS ++  L + G +  A  + DEM + G  
Sbjct: 351 NGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPT 410

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKDVQEA 594
           P++  +++++  + +    E  +    + L + +E  N       ++ +C  D   V+EA
Sbjct: 411 PDICLHSTLLFGYFKYGLVEEAMLLFSK-LERNREDTNISFYTVVINGLCKND--RVREA 467

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC-ILGVFQKMHKLKIKPNVVTFSAILN 653
                ++  + G +   +         CR+ +   + G+ +KM       N +T++ I+ 
Sbjct: 468 HAIFEKLPSI-GLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQ 526

Query: 654 ACSRCNSFEDASMLLEEL 671
              R N   +    ++E+
Sbjct: 527 GFFRSNKISEIVSFMKEM 544



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 215/438 (49%), Gaps = 11/438 (2%)

Query: 135 FARDDVSLGDIL--KKFEFKLCGADD--YTFLLRELGNRGEWSKAIQCFAFAVKREERKN 190
           FA + V+   +L  K    K+C  ++  Y  ++  L  RG   K +      +  +    
Sbjct: 143 FAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLS--LLRIMEQGNTK 200

Query: 191 DQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISV 250
              +  S +I  L +   +D A N+      +     ++ +++LI    + G  ++  ++
Sbjct: 201 PDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTL 260

Query: 251 FNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AV 308
            + M   N+ PN+ T++ +ID  C +G V+     E+   M+  GV+PD IT+++++   
Sbjct: 261 LSEMVNLNINPNVHTFSILIDGLCKEGKVE--DADEVMRHMIEKGVEPDIITYSAIMDGY 318

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
           C RG + + AR +FN +  +GI  +IF+Y+ L++  CK   +  A ++  E+  K + P+
Sbjct: 319 CLRGQV-DRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPD 377

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
            VTYST++ G  + GR+ DA  +F EM  +G   D   ++T+L  Y K G  EEA+L+  
Sbjct: 378 TVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFS 437

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
           ++E +    +   Y  ++ G  K  +  E   +FE++ +  + P++ TY+ +I  + + G
Sbjct: 438 KLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREG 497

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
           L+ E   I R+ +  G  A+ + Y+ ++    ++  +   VS + EM   G   +  T  
Sbjct: 498 LFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTG 557

Query: 549 SIIDAFGRSATTECTVDD 566
            +I+    + +    + D
Sbjct: 558 VLINVLKENPSIVDMIPD 575



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 208/455 (45%), Gaps = 34/455 (7%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           V +F  M+R    P  I F+ L         + A  +LF EM   GI       N + ++
Sbjct: 47  VSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNS 106

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG-L 402
            C   ++D AF ++       I  NVVT++T++ G     ++ DA+ +F ++    I   
Sbjct: 107 YCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEP 166

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           + V Y TV++  +K G  E+ L + + ME    + D  TY+ ++    K    D    + 
Sbjct: 167 NEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLL 226

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +MK   + PN+ TY++LID   K G +++   +  E     +  +V  +S LID LCK 
Sbjct: 227 NEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKE 286

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           G VE A  ++  M ++G+ P+++TY++I+D +       C    V+R     +   N+  
Sbjct: 287 GKVEDADEVMRHMIEKGVEPDIITYSAIMDGY-------CLRGQVDR----ARRVFNV-- 333

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
                   +++ G   N  I  +  L+    G  KK+N  +      + +F ++ +  +K
Sbjct: 334 --------LRDKGIKPN--IFSYSILI---NGYCKKKNLAKA-----MQLFGEISQKGLK 375

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEE-LRLFDNQVYGVAHGLLMGY-RDNIWVQALSL 700
           P+ VT+S IL+         DA  + +E LR+       +   LL GY +  +  +A+ L
Sbjct: 376 PDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLL 435

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLV 735
           F +++     T  +FY  + + L    + R A  +
Sbjct: 436 FSKLERNREDTNISFYTVVINGLCKNDRVREAHAI 470


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 187/358 (52%), Gaps = 5/358 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR-SGYCQEAISVFNSMKRY 257
           +I  L   G+V  A  +F+  L+ G   +V  +S L+ A  + SGY ++A+ + + M+  
Sbjct: 168 LIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGY-RQAMVLLDEMRAK 226

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +P++VTYN +I+A C +G VD    + I  D+  +G +PD +T+  +L        W+
Sbjct: 227 GCEPDIVTYNVLINAMCNEGDVD--EALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWK 284

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               LF EM       D  T+NT++ ++C+   +D A +++  M      P++VTYS+++
Sbjct: 285 EVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSIL 344

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG    GR+DDA+ + S +K  G   D ++Y TVL     + ++E A  +  EM  S   
Sbjct: 345 DGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCP 404

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VT+N ++    ++G  D   ++ EQM  +  +P+++TY+++ID         +AM++
Sbjct: 405 PDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMEL 464

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
               +  G K D+V ++ L+  LC     E A  L+  M      P+  T+N++I + 
Sbjct: 465 LSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSL 522



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 188/357 (52%), Gaps = 9/357 (2%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L   G+V  A+ +F T    G   TV  ++ +++ Y R+G  ++A  + + M    
Sbjct: 104 LIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLISGMP--- 157

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             P+  T+N +I A C +G V     + +FDDML  G  P  +T++ LL    +   +  
Sbjct: 158 FPPDTFTFNPLIRALCVRGRV--PDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQ 215

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  L +EM  +G + DI TYN L++A+C    +D A  I++++P+    P+ VTY+ ++ 
Sbjct: 216 AMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLK 275

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
               + R  +   +F+EM       D V++NT+++   + G  + A+ V   M   G   
Sbjct: 276 SLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIP 335

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D VTY+++L G    G+ D+   +  ++K+    P+ + Y+T++        ++ A ++ 
Sbjct: 336 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELM 395

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            E   +    D V ++ +I +LC+ GLV+ A+ ++++M++ G  P++VTYNSIID  
Sbjct: 396 AEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGL 452



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/425 (24%), Positives = 204/425 (48%), Gaps = 9/425 (2%)

Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           +IL       C  D   YT +L+ L     W +  + FA     +   ++     + +++
Sbjct: 253 NILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVT--FNTIVT 310

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            L + G VD A  + +     G    +  +S+++      G   +A+ + + +K Y  KP
Sbjct: 311 SLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKP 370

Query: 262 NLVTYNAVIDACGKGGVD-FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           + + Y  V+   G   ++ ++H  E+  +M+ +   PD +TFN+++A   + GL + A  
Sbjct: 371 DTIAYTTVLK--GLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIK 428

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           +  +M   G + DI TYN+++D +C    +D A E+++ + +    P++VT++T++ G  
Sbjct: 429 VVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLC 488

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
              R +DA  +   M       D  ++NTV++   + G   +A+   K M  +G   +  
Sbjct: 489 SVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQS 548

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TYN ++    K GK  E  ++   M     +P+L+TY+T+I   +K G  +EA+ + R  
Sbjct: 549 TYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVM 606

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
              GL  D + Y +L   +C+    + A+ +L  +   G+ P+   YN I+  F ++  T
Sbjct: 607 VSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRT 666

Query: 561 ECTVD 565
           +  +D
Sbjct: 667 DIAID 671



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 203/444 (45%), Gaps = 44/444 (9%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGV-DFKHVVE 285
           V   + LI      G   +A  VF ++        +VTYN +++  C  G + D + ++ 
Sbjct: 98  VVPCNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLIS 154

Query: 286 IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
                      PD  TFN L+ A+C RG + +A   +F++M+HRG    + TY+ LLDA 
Sbjct: 155 GMP------FPPDTFTFNPLIRALCVRGRVPDALA-VFDDMLHRGCSPSVVTYSILLDAT 207

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK +    A  ++ EM AK   P++VTY+ +I+     G +D+ALN+ S++   G   D 
Sbjct: 208 CKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDA 267

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V+Y  VL       R++E   +  EM S+    D VT+N ++    +QG  D   ++ + 
Sbjct: 268 VTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDH 327

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M      P+++TYS+++D     G   +A+++    K  G K D + Y+ ++  LC    
Sbjct: 328 MSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQ 387

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
            E A  L+ EM      P+ VT+N++I +  +    +  +  VE+     +   N D + 
Sbjct: 388 WEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQ---MSENGCNPDIV- 443

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
                       T N II             G    RC  + + +L   Q       KP+
Sbjct: 444 ------------TYNSII------------DGLCNERCIDDAMELLSNLQSY---GCKPD 476

Query: 645 VVTFSAILNACSRCNSFEDASMLL 668
           +VTF+ +L      + +EDA  L+
Sbjct: 477 IVTFNTLLKGLCSVDRWEDAEQLM 500



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 179/381 (46%), Gaps = 34/381 (8%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G     +T+N+++    R G  E AR L + M       D FT+N L+ A+C   ++  A
Sbjct: 125 GASATVVTYNTMVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLIRALCVRGRVPDA 181

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             +  +M  +  SP+VVTYS ++D   KA     A+ +  EM+  G   D V+YN +++ 
Sbjct: 182 LAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINA 241

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
               G  +EAL +  ++ S G + DAVTY  +L       ++ EV  +F +M ++  +P+
Sbjct: 242 MCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPD 301

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +T++T++    + GL   A+++     + G   D+V YS+++D LC  G V+ AV LL 
Sbjct: 302 EVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLS 361

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
            +   G +P+ + Y +++          C+++  E       E    + +CS    D   
Sbjct: 362 RLKSYGCKPDTIAYTTVLKGL-------CSIEQWE-----HAEELMAEMVCSDCPPDE-- 407

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
                      F  ++A    +G  +          + V ++M +    P++VT+++I++
Sbjct: 408 ---------VTFNTVIASLCQKGLVDRA--------IKVVEQMSENGCNPDIVTYNSIID 450

Query: 654 ACSRCNSFEDASMLLEELRLF 674
                   +DA  LL  L+ +
Sbjct: 451 GLCNERCIDDAMELLSNLQSY 471



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 153/311 (49%), Gaps = 5/311 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           F+ +I++  + G    AI V   M      P++VTYN++ID  C +  +D    +E+  +
Sbjct: 410 FNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCID--DAMELLSN 467

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           +   G +PD +TFN+LL        WE A  L   M+H     D  T+NT++ ++C+   
Sbjct: 468 LQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGL 527

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  A E +  M      PN  TY+ ++D   KAG+  +AL + S M       D ++YNT
Sbjct: 528 LLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT--NGTPDLITYNT 585

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           V+S   K G+ EEAL + + M S+G+  D +TY +L  G  ++   D   RM  +++   
Sbjct: 586 VISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG 645

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           +SP+   Y+ ++  + +      A+  F     +G   D   Y  L++AL    L++ A 
Sbjct: 646 LSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAK 705

Query: 530 SLLDEMTKEGI 540
            LL  +   G+
Sbjct: 706 QLLVNLCSLGV 716



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 160/361 (44%), Gaps = 39/361 (10%)

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           VV  + +I      GR+ DA  +F+    LG     V+YNT+++ Y + GR E+A  +  
Sbjct: 98  VVPCNILIKRLCSGGRVADAERVFAT---LGASATVVTYNTMVNGYCRAGRIEDARRLIS 154

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            M       D  T+N L+     +G+  +   +F+ M     SP+++TYS L+D   K  
Sbjct: 155 GMP---FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKAS 211

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
            Y++AM +  E +  G + D+V Y+ LI+A+C  G V+ A+++L ++   G +P+ VTY 
Sbjct: 212 GYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYT 271

Query: 549 SIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
            ++ +   S   +  V+++  ++   K        C+ D+                F  +
Sbjct: 272 PVLKSLCGSERWK-EVEELFAEMASNK--------CAPDEV--------------TFNTI 308

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
           V     QG  +          + V   M +    P++VT+S+IL+        +DA  LL
Sbjct: 309 VTSLCQQGLVDRA--------IKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELL 360

Query: 669 EELRLFDNQVYGVAHGLLMGYRDNI--WVQALSLFDEVKLMDSSTASAFYNALTDMLWHF 726
             L+ +  +   +A+  ++    +I  W  A  L  E+   D       +N +   L   
Sbjct: 361 SRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQK 420

Query: 727 G 727
           G
Sbjct: 421 G 421



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 159/355 (44%), Gaps = 40/355 (11%)

Query: 144 DILKKFEFKLCGADD--YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           ++L + +   C  D   YT +L+ L +  +W  A +  A  V  +   ++     + +I+
Sbjct: 358 ELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVT--FNTVIA 415

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            L + G VD A  + E     G    +  ++++I          +A+ + ++++ Y  KP
Sbjct: 416 SLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKP 475

Query: 262 NLVTYNAVIDACGKGGVD-FKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAAR 319
           ++VT+N ++   G   VD ++   ++  +M+ +   PD  TFN+++ ++C +G L +A  
Sbjct: 476 DIVTFNTLLK--GLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIE 533

Query: 320 NL------------------FNEMVHRGIDQ--------------DIFTYNTLLDAICKG 347
            L                   + ++  G  Q              D+ TYNT++  I K 
Sbjct: 534 TLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKA 593

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +M+ A +++  M +  +SP+ +TY ++  G  +    D A+ M   ++ +G+  D   Y
Sbjct: 594 GKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFY 653

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           N +L  + +  R + A+     M SSG   D  TY  LL     +   DE +++ 
Sbjct: 654 NDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLL 708


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 197/417 (47%), Gaps = 43/417 (10%)

Query: 182 AVKREERKNDQG-----KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALIS 236
           A+K  +R   +G     K  SA++  LGR G      N+ E   + G    +Y ++  I 
Sbjct: 219 ALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIR 278

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGV 295
           A GR+    +A  +F  M      P+++TY  +IDA C  G +D     E++  M  +  
Sbjct: 279 ALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLD--KAKELYVKMRASSH 336

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
            PDR+T+ +L+    + G  E  +  +NEM   G   D+ TY  L++A+CK   +D AF+
Sbjct: 337 SPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFD 396

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY-------- 407
           ++  M  K I PN+ TY+TMI G  KA RLD+AL +   M+ LG+     SY        
Sbjct: 397 MLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYG 456

Query: 408 ---------------------------NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
                                      N  L   A+ GR  EA  +  ++   G+  D+V
Sbjct: 457 KSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSV 516

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TYN L+  Y K G+ D+  ++  +M +    P+++  ++LI+   K G    A ++F   
Sbjct: 517 TYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRL 576

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           K   L   VV Y+ L+  L K G +  A+ L   MT+ G  PN +T+NS++D   ++
Sbjct: 577 KNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKN 633



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 209/433 (48%), Gaps = 38/433 (8%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  LG RG+  K +           R N      +  I  LGR  ++D A  IF+ 
Sbjct: 238 YSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYT--YTICIRALGRARRIDDAWGIFKE 295

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             +EG G  V  ++ LI A   +G   +A  ++  M+  +  P+ VTY  ++D  GK G 
Sbjct: 296 MDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVG- 354

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           D + V   +++M  +G  PD +T+  L+    + G  + A ++ + M  +GI  ++ TYN
Sbjct: 355 DLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYN 414

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG--------------- 383
           T++  + K  ++D A E++  M +  + P   +Y   ID Y K+G               
Sbjct: 415 TMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKR 474

Query: 384 --------------------RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
                               R+ +A ++F+++   G+  D V+YN ++  Y+K G+ ++A
Sbjct: 475 GIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKA 534

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
             +  EM S G   D +  N+L+    K G+ D   +MF ++K   ++P ++TY+ L+  
Sbjct: 535 TQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTG 594

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K G   +A+++F    ++G   + + +++L+D L KN  V+ A+ +   MT     P+
Sbjct: 595 LGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPD 654

Query: 544 VVTYNSIIDAFGR 556
           V+TYN+II    R
Sbjct: 655 VLTYNTIIYGLIR 667



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 183/361 (50%), Gaps = 2/361 (0%)

Query: 199  MISILGRLGKVDLAKNIFET-ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            +I +L +  K   A+N+F+    N G   T+ +++ L+     S + ++A+ +F  MK  
Sbjct: 766  LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825

Query: 258  NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
               PN  TYN ++DA GK       + +++ +M   G +P+ IT N +++   +      
Sbjct: 826  GTHPNNFTYNLLLDAHGKSK-RINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNK 884

Query: 318  ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
            A +L+ E++         TY  L+D + K  + + A +I  EM      PN V Y+ +I+
Sbjct: 885  ALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILIN 944

Query: 378  GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            G+ K+G +D A  +F +M   GI  D  SY  ++      GR +EA+   +E++ +G+  
Sbjct: 945  GFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDP 1004

Query: 438  DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
            D V+YN ++ G GK  + DE   +F +MK   +SP+L TY+ LI      G    A++++
Sbjct: 1005 DTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMY 1064

Query: 498  REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
             E +  GL+  V  Y+ALI     +G  + A S+  +M   G  PN  T+  + + + R+
Sbjct: 1065 EELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRA 1124

Query: 558  A 558
             
Sbjct: 1125 G 1125



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 140/561 (24%), Positives = 247/561 (44%), Gaps = 32/561 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L + G VD A ++ +    +G    ++ ++ +I    ++    EA+ +  +M+ 
Sbjct: 379 TILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMES 438

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +KP   +Y   ID  GK G D    ++ F+ M + G+ P     N+ L   +  G   
Sbjct: 439 LGVKPTAFSYVLFIDYYGKSG-DPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRIS 497

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A ++FN++   G+  D  TYN L+    K  Q+D A ++++EM +K   P+V+  +++I
Sbjct: 498 EAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLI 557

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +   KAGR+D A  MF  +K L +    V+YN +L+   K G+  +AL +   M  SG  
Sbjct: 558 NTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCP 617

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + +T+N+LL    K    D   +MF +M     +P++LTY+T+I    + G    A   
Sbjct: 618 PNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWF 677

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG-IRPNVVTYNSIIDAFG 555
           F + K+  L  D V    LI  + ++G VE A+ ++ E   +  ++ N   +  +++   
Sbjct: 678 FHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECIL 736

Query: 556 RSATTE--------------CTVDDVERDLGKQ--KESANLDAMCSQDDKDVQEAGRTDN 599
             A  E              C  D V   L K   K    LDA  +  DK  +  G   +
Sbjct: 737 TEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQ-NVFDKFTKNLGI--H 793

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
             ++ +  L+    G    E          L +F+ M      PN  T++ +L+A  +  
Sbjct: 794 PTLESYNCLMDGLLGSNFTEKA--------LELFEDMKSAGTHPNNFTYNLLLDAHGKSK 845

Query: 660 SFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYN 717
                  L  E+R    +   + H +++    + N   +AL L+ E+   D S     Y 
Sbjct: 846 RINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYG 905

Query: 718 ALTDMLWHFGQKRGAQLVVLE 738
            L D L   G+   A  +  E
Sbjct: 906 PLIDGLLKAGRSEQAMKIFEE 926



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 177/373 (47%), Gaps = 32/373 (8%)

Query: 286  IFDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
            +FD   +N G+ P   ++N L+         E A  LF +M   G   + FTYN LLDA 
Sbjct: 782  VFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAH 841

Query: 345  CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
             K  +++  +++ +EM ++   PN +T++ +I    K+  L+ AL+++ E+         
Sbjct: 842  GKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTP 901

Query: 405  VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
             +Y  ++    K GR E+A+ + +EM   G   ++V YN L+ G+GK G+ D    +F++
Sbjct: 902  CTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKK 961

Query: 465  MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
            M  + + P+L +Y+ L++     G   EA+Q F E K  GL  D V Y+ +I+ L K+  
Sbjct: 962  MVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRR 1021

Query: 525  VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
            ++ A+SL  EM   GI P++ TYN++I   G +   +  V   E                
Sbjct: 1022 LDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYE---------------- 1065

Query: 585  SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
                 ++Q  G   +  +  +  L+   +  G K+            VF+KM  +   PN
Sbjct: 1066 -----ELQLVGLEPS--VFTYNALIRGHSLSGNKDQA--------FSVFKKMMVVGCSPN 1110

Query: 645  VVTFSAILNACSR 657
              TF+ + N   R
Sbjct: 1111 TETFAQLPNKYPR 1123



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 137/546 (25%), Positives = 249/546 (45%), Gaps = 31/546 (5%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            ++    + G++D A  +    +++G    V   ++LI+   ++G    A  +F  +K   
Sbjct: 521  LMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLK 580

Query: 259  LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            L P +VTYN ++   GK G   K  +E+F  M  +G  P+ ITFNSLL   S+    + A
Sbjct: 581  LAPTVVTYNILLTGLGKEGKILK-ALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLA 639

Query: 319  RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
              +F  M     + D+ TYNT++  + +  ++D AF    +M  K +SP+ VT  T+I G
Sbjct: 640  LKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPG 698

Query: 379  YAKAGRLDDALNMFSEMKFLG-IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
              + GR++DA+ +  E      +  +   +  ++         EEA+   + +  + + +
Sbjct: 699  VVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQ 758

Query: 438  DAVTYNALLGGYGKQGKYDEVRRMFEQMKADC-VSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D      L+    K+ K  + + +F++   +  + P L +Y+ L+D        ++A+++
Sbjct: 759  DDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALEL 818

Query: 497  FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            F + K AG   +   Y+ L+DA  K+  +     L  EM   G  PN +T+N II A  +
Sbjct: 819  FEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVK 878

Query: 557  SATTECTVDDVERDLGKQKESANLDAM-CSQDD--KDVQEAGRTDNQIIKVFGQLVAEKA 613
            S      +D     L  +  S +     C+       + +AGR++ Q +K+F +++    
Sbjct: 879  SNNLNKALD-----LYYELMSGDFSPTPCTYGPLIDGLLKAGRSE-QAMKIFEEMLDYGC 932

Query: 614  GQGKKENRC-------RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            G                 EI     +F+KM K  I+P++ +++ ++         ++A  
Sbjct: 933  GPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQ 992

Query: 667  LLEELRLF----DNQVYG-VAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
              EEL+L     D   Y  + +GL    R +   +ALSLF E+K    S     YNAL  
Sbjct: 993  YFEELKLTGLDPDTVSYNFIINGLGKSRRLD---EALSLFSEMKNRGISPDLYTYNAL-- 1047

Query: 722  MLWHFG 727
             + H G
Sbjct: 1048 -ILHLG 1052



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 163/316 (51%), Gaps = 1/316 (0%)

Query: 212  AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
            A  +FE   + G     + ++ L+ A+G+S    +   +++ M+    +PN +T+N +I 
Sbjct: 815  ALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIIS 874

Query: 272  ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            A  K   +    ++++ +++     P   T+  L+    + G  E A  +F EM+  G  
Sbjct: 875  ALVKSN-NLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCG 933

Query: 332  QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
             +   YN L++   K  ++D A E+  +M  + I P++ +Y+ +++     GR+D+A+  
Sbjct: 934  PNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQY 993

Query: 392  FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
            F E+K  G+  D VSYN +++   K  R +EAL +  EM++ GI  D  TYNAL+   G 
Sbjct: 994  FEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGI 1053

Query: 452  QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
             GK D   +M+E+++   + P++ TY+ LI  +S  G   +A  +F++    G   +   
Sbjct: 1054 AGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTET 1113

Query: 512  YSALIDALCKNGLVES 527
            ++ L +   + GLV +
Sbjct: 1114 FAQLPNKYPRAGLVHN 1129



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 153/647 (23%), Positives = 266/647 (41%), Gaps = 66/647 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           M+ IL    +++    +F+    +     +  +  +  A    G    A      M    
Sbjct: 137 MLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVG 196

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
              N  +YN +I     G  +    ++++  M+  G++P   T+++L+    R G     
Sbjct: 197 FILNAYSYNGLIHLLLPGFCN--EALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKI 254

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            NL  EM   G+  +I+TY   + A+ +  ++D A+ I  EM  +   P+V+TY+ +ID 
Sbjct: 255 MNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDA 314

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
              AG+LD A  ++ +M+      DRV+Y T++  + K+G  E       EME  G   D
Sbjct: 315 LCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPD 374

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VTY  L+    K G  D    M + M    + PNL TY+T+I    K     EA+++  
Sbjct: 375 VVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLE 434

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---G 555
             +  G+K     Y   ID   K+G    A+   + M K GI P++   N+ +      G
Sbjct: 435 NMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETG 494

Query: 556 RSATTECTVDDVER-DLGKQKESANLDAMC----SQDDKDVQ------------------ 592
           R +  E   +D+ +  L     + N+   C     Q DK  Q                  
Sbjct: 495 RISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIIN 554

Query: 593 -------EAGRTDNQIIKVFGQLVAEK------------AGQGKKENRCRQEILCILGVF 633
                  +AGR D    K+FG+L   K             G GK+      +IL  L +F
Sbjct: 555 SLINTLYKAGRVD-AAWKMFGRLKNLKLAPTVVTYNILLTGLGKE-----GKILKALELF 608

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYG-VAHGLLMG 688
             M +    PN +TF+++L+  S+ ++ + A  +   + +     D   Y  + +GL+  
Sbjct: 609 GSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLI-- 666

Query: 689 YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR---QVW 745
            R+     A   F ++K   S         +  ++ H G+   A  VV+E   +   Q  
Sbjct: 667 -REGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRH-GRVEDAIKVVMEFVHQACLQTN 724

Query: 746 ENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSIL 792
              W E  ++  L  +    A+  A +L  +S+  + H +  L+ +L
Sbjct: 725 SQFWGE-LMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVL 770



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 198/436 (45%), Gaps = 41/436 (9%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
            Y  LL  LG  G+  KA++ F    +     N      ++++  L +   VDLA  +F  
Sbjct: 588  YNILLTGLGKEGKILKALELFGSMTESGCPPNTIT--FNSLLDCLSKNDAVDLALKMFCR 645

Query: 219  ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG- 277
                     V  ++ +I    R G    A   F+ MK++ L P+ VT   +I    + G 
Sbjct: 646  MTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGR 704

Query: 278  --------VDFKHVV----------EIFDDMLRNGVQPDRITFNSLLA------------ 307
                    ++F H            E+ + +L      + I+F  +L             
Sbjct: 705  VEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVML 764

Query: 308  -----VCSRGGLWEAARNLFNEMVHR-GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
                 +C R    +A +N+F++     GI   + +YN L+D +      + A E+  +M 
Sbjct: 765  PLIKVLCKRKKALDA-QNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMK 823

Query: 362  AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            +    PN  TY+ ++D + K+ R++   +++SEM+  G   + +++N ++S   K     
Sbjct: 824  SAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLN 883

Query: 422  EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
            +AL +  E+ S        TY  L+ G  K G+ ++  ++FE+M      PN + Y+ LI
Sbjct: 884  KALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILI 943

Query: 482  DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
            + + K G    A ++F++  + G++ D+  Y+ L++ LC  G ++ AV   +E+   G+ 
Sbjct: 944  NGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLD 1003

Query: 542  PNVVTYNSIIDAFGRS 557
            P+ V+YN II+  G+S
Sbjct: 1004 PDTVSYNFIINGLGKS 1019



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 10/201 (4%)

Query: 146  LKKFEFKL---CGADD--YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMI 200
            +K FE  L   CG +   Y  L+   G  GE   A + F   VK   R +   K  + ++
Sbjct: 921  MKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPD--LKSYTILV 978

Query: 201  SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
              L   G++D A   FE     G      +++ +I+  G+S    EA+S+F+ MK   + 
Sbjct: 979  ECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGIS 1038

Query: 261  PNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            P+L TYNA+I   G  G VD    V++++++   G++P   T+N+L+   S  G  + A 
Sbjct: 1039 PDLYTYNALILHLGIAGKVDV--AVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAF 1096

Query: 320  NLFNEMVHRGIDQDIFTYNTL 340
            ++F +M+  G   +  T+  L
Sbjct: 1097 SVFKKMMVVGCSPNTETFAQL 1117


>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
          Length = 1025

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 186/342 (54%), Gaps = 10/342 (2%)

Query: 191 DQGKLASAMISILGRLGKVDLAKNIFE--TALNEGYG-----NTVYAFSALISAYGRSGY 243
           D G LA A++  L + G V  A+ +F+    L++ +      NT+  ++ +IS  G    
Sbjct: 153 DSGALA-ALLKELNKSGHVRRAQELFDWLRGLDDSHDLYPLCNTM-TYTTMISQCGTQQQ 210

Query: 244 CQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
            + A+ +   M+   ++ N+ TY+A+++ C KG  +    ++++  ML  G  P+ +T+N
Sbjct: 211 LRRALELVAEMRSRGIQCNVHTYSALMNVCIKGN-ELDLALDVYRQMLAEGCTPNLVTYN 269

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
           +L+ V  + G WE A  + + +  +GID +I TYNT++ A     Q   A  I   M A 
Sbjct: 270 TLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAA 329

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
              P   TY+ +I  Y K G+LD AL +F +M   G   + ++Y++++S   K GR+E A
Sbjct: 330 GAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELA 389

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
           L + +EM + G R + VTYN+L+    +  ++++ + MFEQM+     P+ +T+  LI  
Sbjct: 390 LELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAA 449

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           Y + G ++ A+  F + K    + D V+Y+ ++ AL K GLV
Sbjct: 450 YDRAGHWRRALTAFEQMKAHNCRPDSVVYNTIVGALWKTGLV 491



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 166/303 (54%), Gaps = 3/303 (0%)

Query: 151 FKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVD 210
           + LC    YT ++ + G + +  +A++  A    R  + N      SA++++  +  ++D
Sbjct: 190 YPLCNTMTYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVH--TYSALMNVCIKGNELD 247

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           LA +++   L EG    +  ++ LI  YG++G  +EAI V ++++R  + P + TYN VI
Sbjct: 248 LALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVI 307

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
            AC   G   +  + I++ ML  G QP   T+ +L++   + G  + A  +F +MV RG 
Sbjct: 308 IACNMSG-QAQEALRIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGC 366

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
           ++++ TY++L+ A  K  + +LA E+  EM  +   PNVVTY+++I   A+  + + A  
Sbjct: 367 ERNVITYSSLISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQE 426

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           MF +M+  G   D V++  +++ Y + G +  AL   ++M++   R D+V YN ++G   
Sbjct: 427 MFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQMKAHNCRPDSVVYNTIVGALW 486

Query: 451 KQG 453
           K G
Sbjct: 487 KTG 489



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 178/334 (53%), Gaps = 7/334 (2%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMK----RYNLKP--NLVTYNAVIDACGKGGVDFKHV 283
           A +AL+    +SG+ + A  +F+ ++     ++L P  N +TY  +I  CG      +  
Sbjct: 156 ALAALLKELNKSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQ-QQLRRA 214

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           +E+  +M   G+Q +  T+++L+ VC +G   + A +++ +M+  G   ++ TYNTL+D 
Sbjct: 215 LELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDV 274

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
             K    + A  ++  +  + I P + TY+T+I     +G+  +AL ++  M   G    
Sbjct: 275 YGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPT 334

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +Y  ++S Y K G+ + AL + ++M   G  ++ +TY++L+    K G+++    +F 
Sbjct: 335 ATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFR 394

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M  +   PN++TY++LI   ++G  +++A ++F + +  G K D V +  LI A  + G
Sbjct: 395 EMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAG 454

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
               A++  ++M     RP+ V YN+I+ A  ++
Sbjct: 455 HWRRALTAFEQMKAHNCRPDSVVYNTIVGALWKT 488



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 179/367 (48%), Gaps = 45/367 (12%)

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID--QDIF------TYNTLLDAICKGAQ 349
           D     +LL   ++ G    A+ LF+ +  RG+D   D++      TY T++       Q
Sbjct: 153 DSGALAALLKELNKSGHVRRAQELFDWL--RGLDDSHDLYPLCNTMTYTTMISQCGTQQQ 210

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  A E++AEM ++ I  NV TYS +++   K   LD AL+++ +M   G   + V+YNT
Sbjct: 211 LRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNT 270

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++ +Y K G +EEA+ V   +E  GI  +  TYN ++      G+  E  R++E+M A  
Sbjct: 271 LIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAG 330

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P   TY+ LI  Y K G    A+QIF++  + G + +V+ YS+LI A  K G  E A+
Sbjct: 331 AQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELAL 390

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            L  EM  EG RPNVVTYNS+I A  + A  E   +  E+    Q      DA+      
Sbjct: 391 ELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQ---MQHRGCKPDAV------ 441

Query: 590 DVQEAGRTDNQIIKVFGQLVA--EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
                          FG L+A  ++AG  ++           L  F++M     +P+ V 
Sbjct: 442 --------------TFGGLIAAYDRAGHWRR----------ALTAFEQMKAHNCRPDSVV 477

Query: 648 FSAILNA 654
           ++ I+ A
Sbjct: 478 YNTIVGA 484



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 182/388 (46%), Gaps = 58/388 (14%)

Query: 381 KAGRLDDALNMFSEMKFLGIGLD------RVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           K+G +  A  +F  ++ L    D       ++Y T++S      +   AL +  EM S G
Sbjct: 166 KSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQLRRALELVAEMRSRG 225

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I+ +  TY+AL+    K  + D    ++ QM A+  +PNL+TY+TLIDVY K G ++EA+
Sbjct: 226 IQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAI 285

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++    ++ G+  ++  Y+ +I A   +G  + A+ + + M   G +P   TY ++I A+
Sbjct: 286 RVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISAY 345

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA--EK 612
           G++         ++R L              Q  +D+   G   N I   +  L++  EK
Sbjct: 346 GKNG-------QLDRAL--------------QIFQDMVRRGCERNVI--TYSSLISACEK 382

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           AG        R E+   L +F++MH    +PNVVT+++++ AC++   +E A  + E+++
Sbjct: 383 AG--------RWEL--ALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQ 432

Query: 673 LFDNQVYGVAHGLLMGYRDNI--WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKR 730
               +   V  G L+   D    W +AL+ F+++K  +    S  YN +   LW  G   
Sbjct: 433 HRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQMKAHNCRPDSVVYNTIVGALWKTG--- 489

Query: 731 GAQLVVLEGKRRQVWENVWSESCLDLHL 758
                        VW  +++  C   H 
Sbjct: 490 ------------LVWAQIFTPPCRQEHF 505


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 198/369 (53%), Gaps = 17/369 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +++ L R G+V  A  + +  + +G       +  ++    + G    A+++   M+ 
Sbjct: 85  TTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEE 144

Query: 257 YN-LKPNLVTYNAVIDACGKGGVDFKHV--VEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            + +KP++V Y+A+ID   K G   +H     +F +M   G+ PD +T++ ++      G
Sbjct: 145 LSHIKPDVVIYSAIIDGLWKDG---RHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSG 201

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            W  A+ L  EM+ R I  D+ T++ L++A+ K   ++ A +++ EM +  + PNVVT +
Sbjct: 202 KWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCN 261

Query: 374 TMIDGYAKAGRLDDALNMFSEMK-----------FLGIGLDRVSYNTVLSIYAKLGRFEE 422
           T++DG   +G+L DAL MF  M+           F G+  D  +YN ++S     G+F E
Sbjct: 262 TLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLE 321

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A  + +EM   GI  D VTY++++ G  KQ + DE  +MF+ M +   SPN++T++TLI 
Sbjct: 322 AEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLIT 381

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            Y K G+  + +++F E  + G+ A+ + Y  LI    K G +  ++ +  EM   G+ P
Sbjct: 382 GYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYP 441

Query: 543 NVVTYNSII 551
           + +T  +++
Sbjct: 442 DTITIRNML 450



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 179/350 (51%), Gaps = 13/350 (3%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  F+ L++   R G   EA+++ + M    L+PN +TY  ++D   K G D    + + 
Sbjct: 81  VVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG-DTVSALNLL 139

Query: 288 DDMLR-NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             M   + ++PD + +++++    + G    A+NLF EM  +GI  DI TY+ +++  C 
Sbjct: 140 RKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCS 199

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +   A  ++ EM  + ISP+VVT+S +I+   K G L+ A ++  EM   G+  + V+
Sbjct: 200 SGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVT 259

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESS-----------GIRKDAVTYNALLGGYGKQGKY 455
            NT+L      G+ ++AL + K M+ S           G+  D  TYN L+ G   +GK+
Sbjct: 260 CNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKF 319

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            E   ++E+M    + P+ +TYS++I+   K     EA Q+F          ++V ++ L
Sbjct: 320 LEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTL 379

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           I   CK G+V+  + L  EM + GI  N +TY ++I  F +      ++D
Sbjct: 380 ITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 226/496 (45%), Gaps = 51/496 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I       K+  A + F      G+  T+  F+ L+          EA+ +F+ M    
Sbjct: 21  LIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM---- 76

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            KPN+VT+  +++  C +G V     V + D M+ +G+QP++IT+ +++    + G   +
Sbjct: 77  CKPNVVTFTTLMNGLCREGRV--VEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVS 134

Query: 318 ARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           A NL  +M     I  D+  Y+ ++D + K  +   A  +  EM  K I P++VTYS MI
Sbjct: 135 ALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMI 194

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G+  +G+  +A  +  EM    I  D V+++ +++   K G    A  + +EM SSG+ 
Sbjct: 195 NGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVC 254

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKA-----------DCVSPNLLTYSTLIDVYS 485
            + VT N LL G    GK  +   MF+ M+            + V P++ TY+ LI    
Sbjct: 255 PNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLI 314

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
             G + EA +++ E    G+  D V YS++I+ LCK   ++ A  + D M  +   PN+V
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIV 374

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
           T+N++I  + ++      VDD             L+  C    + +     T   +I+ F
Sbjct: 375 TFNTLITGYCKAGM----VDD------------GLELFCEMGRRGIVANAITYITLIRGF 418

Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
                 K G               L +FQ+M    + P+ +T   +L         + A 
Sbjct: 419 -----RKVGNINGS----------LDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKAL 463

Query: 666 MLLEELRL-FDNQVYG 680
            +LEEL++  D+ + G
Sbjct: 464 AMLEELQMSMDHHLVG 479



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 199/386 (51%), Gaps = 31/386 (8%)

Query: 291 LRNGVQ--PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +++G+Q   D  +FN L+           A + F ++   G    + T+NTLL  +C   
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++  A ++  +M      PNVVT++T+++G  + GR+ +A+ +   M   G+  ++++Y 
Sbjct: 65  RVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 409 TVLSIYAKLGRFEEALLVCKEMES-SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           T++    K+G    AL + ++ME  S I+ D V Y+A++ G  K G++ + + +F +M+ 
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + P+++TYS +I+ +   G + EA ++ +E     +  DVV +S LI+AL K G + S
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
           A  LL EM   G+ PNVVT N+++D    S   +   D +E     QK   ++DA  + +
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLK---DALEMFKAMQKSMMDIDATHAFN 297

Query: 588 --DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
             + DVQ            +  L++    +GK         L    ++++M    I P+ 
Sbjct: 298 GVEPDVQ-----------TYNILISGLINEGK--------FLEAEELYEEMPHRGIVPDT 338

Query: 646 VTFSAILNACSRCNSFEDASMLLEEL 671
           VT+S+++N   + +  ++A+ + + +
Sbjct: 339 VTYSSMINGLCKQSRLDEATQMFDSM 364



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 147/281 (52%), Gaps = 12/281 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S MI+     GK   A+ + +  L       V  FS LI+A  + G    A  +   M  
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLR-----------NGVQPDRITFNSL 305
             + PN+VT N ++D     G   K  +E+F  M +           NGV+PD  T+N L
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSG-KLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           ++     G +  A  L+ EM HRGI  D  TY+++++ +CK +++D A ++   M +K+ 
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           SPN+VT++T+I GY KAG +DD L +F EM   GI  + ++Y T++  + K+G    +L 
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           + +EM SSG+  D +T   +L G   + +  +   M E+++
Sbjct: 430 IFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 148/287 (51%), Gaps = 16/287 (5%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ ++    + G+WS+A +     + R  + +      S +I+ L + G ++ A+++ + 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVR--KISPDVVTFSGLINALVKEGDLNSAQDLLQE 247

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR----------YN-LKPNLVTYN 267
            ++ G    V   + L+     SG  ++A+ +F +M++          +N ++P++ TYN
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
            +I      G  F    E++++M   G+ PD +T++S++  +C +  L EA + +F+ M 
Sbjct: 308 ILISGLINEG-KFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQ-MFDSMG 365

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +    +I T+NTL+   CK   +D   E+  EM  + I  N +TY T+I G+ K G ++
Sbjct: 366 SKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNIN 425

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +L++F EM   G+  D ++   +L+        ++AL + +E++ S
Sbjct: 426 GSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMS 472



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 124/302 (41%), Gaps = 44/302 (14%)

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           +  ++ +++ LI  +        A+  F +  + G    +V ++ L+  LC    V  A+
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES-ANLDAMCSQDD 588
            L  +M K    PNVVT+ ++++   R               G+  E+ A LD M     
Sbjct: 71  DLFHQMCK----PNVVTFTTLMNGLCRE--------------GRVVEAVALLDRMV---- 108

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK-IKPNVVT 647
               E G   NQI   +G +V      G        + +  L + +KM +L  IKP+VV 
Sbjct: 109 ----EDGLQPNQI--TYGTIVDGMCKMG--------DTVSALNLLRKMEELSHIKPDVVI 154

Query: 648 FSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGY-RDNIWVQALSLFDE 703
           +SAI++   +     DA  L  E++   +F + V      ++ G+     W +A  L  E
Sbjct: 155 YSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIV--TYSCMINGFCSSGKWSEAQRLLQE 212

Query: 704 VKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGA 763
           + +   S     ++ L + L   G    AQ ++ E     V  NV + + L   L  SG 
Sbjct: 213 MLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGK 272

Query: 764 AR 765
            +
Sbjct: 273 LK 274


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 198/369 (53%), Gaps = 17/369 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +++ L R G+V  A  + +  + +G       +  ++    + G    A+++   M+ 
Sbjct: 85  TTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEE 144

Query: 257 YN-LKPNLVTYNAVIDACGKGGVDFKHV--VEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            + +KP++V Y+A+ID   K G   +H     +F +M   G+ PD +T++ ++      G
Sbjct: 145 LSHIKPDVVIYSAIIDGLWKDG---RHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSG 201

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            W  A+ L  EM+ R I  D+ T++ L++A+ K   ++ A +++ EM +  + PNVVT +
Sbjct: 202 KWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCN 261

Query: 374 TMIDGYAKAGRLDDALNMFSEMK-----------FLGIGLDRVSYNTVLSIYAKLGRFEE 422
           T++DG   +G+L DAL MF  M+           F G+  D  +YN ++S     G+F E
Sbjct: 262 TLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLE 321

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A  + +EM   GI  D VTY++++ G  KQ + DE  +MF+ M +   SPN++T++TLI 
Sbjct: 322 AEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLIT 381

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            Y K G+  + +++F E  + G+ A+ + Y  LI    K G +  ++ +  EM   G+ P
Sbjct: 382 GYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYP 441

Query: 543 NVVTYNSII 551
           + +T  +++
Sbjct: 442 DTITIRNML 450



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 179/350 (51%), Gaps = 13/350 (3%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  F+ L++   R G   EA+++ + M    L+PN +TY  ++D   K G D    + + 
Sbjct: 81  VVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG-DTVSALNLL 139

Query: 288 DDMLR-NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             M   + ++PD + +++++    + G    A+NLF EM  +GI  DI TY+ +++  C 
Sbjct: 140 RKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCS 199

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +   A  ++ EM  + ISP+VVT+S +I+   K G L+ A ++  EM   G+  + V+
Sbjct: 200 SGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVT 259

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESS-----------GIRKDAVTYNALLGGYGKQGKY 455
            NT+L      G+ ++AL + K M+ S           G+  D  TYN L+ G   +GK+
Sbjct: 260 CNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKF 319

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            E   ++E+M    + P+ +TYS++I+   K     EA Q+F          ++V ++ L
Sbjct: 320 LEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTL 379

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           I   CK G+V+  + L  EM + GI  N +TY ++I  F +      ++D
Sbjct: 380 ITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 226/496 (45%), Gaps = 51/496 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I       K+  A + F      G+  T+  F+ L+          EA+ +F+ M    
Sbjct: 21  LIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM---- 76

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            KPN+VT+  +++  C +G V     V + D M+ +G+QP++IT+ +++    + G   +
Sbjct: 77  CKPNVVTFTTLMNGLCREGRV--VEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVS 134

Query: 318 ARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           A NL  +M     I  D+  Y+ ++D + K  +   A  +  EM  K I P++VTYS MI
Sbjct: 135 ALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMI 194

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G+  +G+  +A  +  EM    I  D V+++ +++   K G    A  + +EM SSG+ 
Sbjct: 195 NGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVC 254

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKA-----------DCVSPNLLTYSTLIDVYS 485
            + VT N LL G    GK  +   MF+ M+            + V P++ TY+ LI    
Sbjct: 255 PNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLI 314

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
             G + EA +++ E    G+  D V YS++I+ LCK   ++ A  + D M  +   PN+V
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIV 374

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
           T+N++I  + ++      VDD             L+  C    + +     T   +I+ F
Sbjct: 375 TFNTLITGYCKAGM----VDD------------GLELFCEMGRRGIVANAITYITLIRGF 418

Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
                 K G               L +FQ+M    + P+ +T   +L         + A 
Sbjct: 419 -----RKVGNINGS----------LDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAL 463

Query: 666 MLLEELRL-FDNQVYG 680
            +LEEL++  D+ + G
Sbjct: 464 AMLEELQMSMDHHLVG 479



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 199/386 (51%), Gaps = 31/386 (8%)

Query: 291 LRNGVQ--PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +++G+Q   D  +FN L+           A + F ++   G    + T+NTLL  +C   
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++  A ++  +M      PNVVT++T+++G  + GR+ +A+ +   M   G+  ++++Y 
Sbjct: 65  RVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 409 TVLSIYAKLGRFEEALLVCKEMES-SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           T++    K+G    AL + ++ME  S I+ D V Y+A++ G  K G++ + + +F +M+ 
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + P+++TYS +I+ +   G + EA ++ +E     +  DVV +S LI+AL K G + S
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
           A  LL EM   G+ PNVVT N+++D    S   +   D +E     QK   ++DA  + +
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLK---DALEMFKAMQKSMMDIDATHAFN 297

Query: 588 --DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
             + DVQ            +  L++    +GK         L    ++++M    I P+ 
Sbjct: 298 GVEPDVQ-----------TYNILISGLINEGK--------FLEAEELYEEMPHRGIVPDT 338

Query: 646 VTFSAILNACSRCNSFEDASMLLEEL 671
           VT+S+++N   + +  ++A+ + + +
Sbjct: 339 VTYSSMINGLCKQSRLDEATQMFDSM 364



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 146/281 (51%), Gaps = 12/281 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S MI+     GK   A+ + +  L       V  FS LI+A  + G    A  +   M  
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLR-----------NGVQPDRITFNSL 305
             + PN+VT N ++D     G   K  +E+F  M +           NGV+PD  T+N L
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSG-KLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           ++     G +  A  L+ EM HRGI  D  TY+++++ +CK +++D A ++   M +K+ 
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           SPN+VT++T+I GY KAG +DD L +F EM   GI  + ++Y T++  + K+G    +L 
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           + +EM SSG+  D +T   +L G   + +      M E+++
Sbjct: 430 IFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 147/287 (51%), Gaps = 16/287 (5%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ ++    + G+WS+A +     + R  + +      S +I+ L + G ++ A+++ + 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVR--KISPDVVTFSGLINALVKEGDLNSAQDLLQE 247

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR----------YN-LKPNLVTYN 267
            ++ G    V   + L+     SG  ++A+ +F +M++          +N ++P++ TYN
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
            +I      G  F    E++++M   G+ PD +T++S++  +C +  L EA + +F+ M 
Sbjct: 308 ILISGLINEG-KFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQ-MFDSMG 365

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +    +I T+NTL+   CK   +D   E+  EM  + I  N +TY T+I G+ K G ++
Sbjct: 366 SKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNIN 425

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +L++F EM   G+  D ++   +L+        + AL + +E++ S
Sbjct: 426 GSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMS 472



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 124/302 (41%), Gaps = 44/302 (14%)

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           +  ++ +++ LI  +        A+  F +  + G    +V ++ L+  LC    V  A+
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES-ANLDAMCSQDD 588
            L  +M K    PNVVT+ ++++   R               G+  E+ A LD M     
Sbjct: 71  DLFHQMCK----PNVVTFTTLMNGLCRE--------------GRVVEAVALLDRMV---- 108

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK-IKPNVVT 647
               E G   NQI   +G +V      G        + +  L + +KM +L  IKP+VV 
Sbjct: 109 ----EDGLQPNQI--TYGTIVDGMCKMG--------DTVSALNLLRKMEELSHIKPDVVI 154

Query: 648 FSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGY-RDNIWVQALSLFDE 703
           +SAI++   +     DA  L  E++   +F + V      ++ G+     W +A  L  E
Sbjct: 155 YSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIV--TYSCMINGFCSSGKWSEAQRLLQE 212

Query: 704 VKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGA 763
           + +   S     ++ L + L   G    AQ ++ E     V  NV + + L   L  SG 
Sbjct: 213 MLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGK 272

Query: 764 AR 765
            +
Sbjct: 273 LK 274


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 219/470 (46%), Gaps = 30/470 (6%)

Query: 145 ILKKFEFKLCGA--DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMI 200
           +LK  E +  G   +D T+  ++  L  +GE  KA Q     + R  +K         + 
Sbjct: 251 LLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQ--LVDIMRLSKKASAFTYNPLIT 308

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
            +L R   V+ A  +     NEG   TV  ++ LI    ++G  + A   F+ M+   L 
Sbjct: 309 GLLAR-DFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLL 367

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           P+L+TYN++I+   K G + K  + +F D+ R G+ P  +T+N L+    R G  E AR 
Sbjct: 368 PDLITYNSLINGYCKAG-NLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARR 426

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L  EM       D+ TY  L++  C    + +      EM +K + P+   Y+T I    
Sbjct: 427 LKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAEL 486

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
             G + +A  +  EM   GI  D V+YN ++    K G  ++A ++  +M + G+R D V
Sbjct: 487 TIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCV 546

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY  L+  + ++G+  E + +F+ M A  +SP+++TY+  I  Y + G    A   FR+ 
Sbjct: 547 TYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKM 606

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            + G++ + V Y+ L+ ALC+ G  ESA     EM + G+ PN  TY  +ID        
Sbjct: 607 LEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLID-------- 658

Query: 561 ECTVDDVERDLGKQKESANLDAM---CSQDDKDVQEAGRTDNQIIKVFGQ 607
                      G  KE   + A+   C    K +     T N + K FG+
Sbjct: 659 -----------GSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGE 697



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 204/408 (50%), Gaps = 33/408 (8%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F +M R+GV P     N +L V      W+  R ++++M+  G++  IFTYNTLLD+ CK
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241

Query: 347 GAQMDLAFEIMAEMPAK--NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
             +MD A  ++ +M A+     PN VTY+ +I+G A+ G L+ A  +   M+ L      
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMR-LSKKASA 300

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +YN +++        E+A  +  EME+ GI    VTYN L+ G  K G  +  +  F++
Sbjct: 301 FTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDE 360

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M+A  + P+L+TY++LI+ Y K G  K+A+ +F + K+AGL   V+ Y+ LID  C+ G 
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGD 420

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESANLDA 582
           +E A  L +EMT+E   P+V TY  +++         C V ++   R    +  S  L+ 
Sbjct: 421 LEGARRLKEEMTEEDCLPDVCTYTILMNG-------SCMVRNLAMVRIFFDEMLSKGLEP 473

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI----LCILG------- 631
            C   +  +  A  T   I   F QL  E   +G   +     +    LC  G       
Sbjct: 474 DCFAYNTRIS-AELTIGAITNAF-QLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYV 531

Query: 632 VFQKMHKLKIKPNVVTFSAILNA-CSRCNSFEDASMLLEELRLFDNQV 678
           ++ KM    ++ + VT++ +++A C R         L+E   +FD  V
Sbjct: 532 LWMKMVTDGLRLDCVTYTCLIHAHCER-------GRLIEAKNIFDGMV 572



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 159/368 (43%), Gaps = 70/368 (19%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L + G  + A+  F+    +G    +  +++LI+ Y ++G  ++A+ +F  +KR
Sbjct: 339 NTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKR 398

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVD---------------------------------FKH 282
             L P ++TYN +ID  C  G ++                                    
Sbjct: 399 AGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAM 458

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           V   FD+ML  G++PD   +N+ ++     G    A  L  EM+ RGI  D  TYN L+D
Sbjct: 459 VRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLID 518

Query: 343 AICKGAQMDLAFEIMAEM--------------------------PAKNI---------SP 367
            +CK   +  A+ +  +M                           AKNI         SP
Sbjct: 519 GLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSP 578

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           +VVTY+  I  Y + G L  A   F +M   G+  + V+YN ++    ++GR E A    
Sbjct: 579 SVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHF 638

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
            EM   G+  +  TY  L+ G  K+G +    R++ +M    + P+  T++ L   + +G
Sbjct: 639 HEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEG 698

Query: 488 GLYKEAMQ 495
            +Y +A+Q
Sbjct: 699 HMY-DAVQ 705



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 124/252 (49%), Gaps = 3/252 (1%)

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           + +  F+  L++G     +A++  ISA    G    A  +   M    +  + VTYN +I
Sbjct: 458 MVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLI 517

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRG 329
           D   K G   K    ++  M+ +G++ D +T+  L+ A C RG L EA +N+F+ MV  G
Sbjct: 518 DGLCKTG-SLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEA-KNIFDGMVASG 575

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +   + TY   +   C+   + LA+    +M  + + PN VTY+ ++    + GR + A 
Sbjct: 576 LSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAY 635

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
             F EM   G+  ++ +Y  ++    K G +  A+ +  EM   GI  D  T+NAL  G+
Sbjct: 636 QHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGF 695

Query: 450 GKQGKYDEVRRM 461
           G+   YD V+ +
Sbjct: 696 GEGHMYDAVQYL 707



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 1/127 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +  I    R G + LA   F   L EG       ++ L+ A  R G  + A   F+ M  
Sbjct: 584 TIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLE 643

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L PN  TY  +ID   K G ++ H + ++ +M + G+ PD  T N+L      G +++
Sbjct: 644 RGLVPNKYTYTLLIDGSCKEG-NWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGHMYD 702

Query: 317 AARNLFN 323
           A + L N
Sbjct: 703 AVQYLEN 709


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 246/524 (46%), Gaps = 49/524 (9%)

Query: 255 KRYNLKP-----------NLVTYNAVIDACGKGGVDFKHVVEIF-DDMLRNGVQPDRITF 302
           +R NL P           ++  YN V+ +  + G +    +EIF  +M R+GV P  +T+
Sbjct: 26  QRVNLCPLKFFFVRSSSRSVADYNIVLQSLCRAG-ETARALEIFRGEMARDGVAPTIVTY 84

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           N+++    +     A   LF E+V RG   D+ TYNTL+D++CK   ++ A  +   M +
Sbjct: 85  NTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSS 144

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM--KFLGIGLDRVSYNTVLSIYAKLGRF 420
           +   PNVVTYS +I+G  K GR+D+A  +  EM  K   +  + ++YN+ L    K    
Sbjct: 145 RGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMT 204

Query: 421 EEALLVCKEMESSGIR--KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
            EA  + + +    +R   D VT++ L+ G  K G+ DE     + M A    PN++TY+
Sbjct: 205 AEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYN 262

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            L++   K    + A  +       G+  DV+ YS L+DA CK   V+ A+ LL  M   
Sbjct: 263 ALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR 322

Query: 539 GIRPNVVTYNSIIDAFGRSATT----ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEA 594
           G  PNVVT+NSIID   +S  +    +  +    R L   K + N+    +    + ++A
Sbjct: 323 GCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQA 382

Query: 595 GRTDNQIIK--------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
                +++          FG L+      G+ E    ++IL ++G       L + PNVV
Sbjct: 383 SALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEA--ARDILDLMG------NLGVPPNVV 434

Query: 647 TFSAILNACSRCNSFEDASMLLEELR----LFDNQVYG-VAHGLLMGYRDNIWVQALSLF 701
           T++ +++   +    E+    LEE+     + ++  YG + + L    R +    AL L 
Sbjct: 435 TYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTD---DALQLV 491

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE--GKRRQ 743
            ++K       +  YN L D LW  G+   A  V+ E  GK  Q
Sbjct: 492 SKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQ 535



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 215/444 (48%), Gaps = 45/444 (10%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           DY  +L+ L   GE ++A++ F   + R+          + +I+ L +  ++     +FE
Sbjct: 47  DYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTY-NTIINGLCKSNELGAGMELFE 105

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKG 276
             +  G+   V  ++ LI +  ++G  +EA  +   M      PN+VTY+ +I+  C  G
Sbjct: 106 ELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVG 165

Query: 277 GVDFKHVVEIFDDM------------------------------------LRNG---VQP 297
            +D     E+  +M                                    LR+G   V P
Sbjct: 166 RID--EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 223

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
           D +TF++L+    + G  + A N  ++M+  G   ++ TYN L++ +CK  +M+ A  ++
Sbjct: 224 DTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMI 281

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
             M  K ++P+V+TYS ++D + KA R+D+AL +   M   G   + V++N+++    K 
Sbjct: 282 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 341

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
            R  EA  +  ++ +  +  D VT+N L+ G  K G +++   +FE+M A  + P+++T+
Sbjct: 342 DRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTF 401

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
             LID   K G  + A  I       G+  +VV Y+ L+  LCK+G +E     L+EM  
Sbjct: 402 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVS 461

Query: 538 EGIRPNVVTYNSIIDAFGRSATTE 561
            G  P  +TY S++ A  R++ T+
Sbjct: 462 SGCVPESMTYGSLVYALCRASRTD 485



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 203/382 (53%), Gaps = 9/382 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYG--NTVYAFSALISAYGRSGYCQEAISVFNSM 254
           S +I+ L ++G++D A+ + +    +       +  +++ +    +     EA  +  S+
Sbjct: 155 SVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL 214

Query: 255 KRYNLK--PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
           +  +L+  P+ VT++ +ID  C  G  D        DDM+  G  P+ +T+N+L+    +
Sbjct: 215 RDGSLRVSPDTVTFSTLIDGLCKCGQTDEA----CNDDMIAGGYVPNVVTYNALVNGLCK 270

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
               E A  +   MV +G+  D+ TY+ L+DA CK +++D A E++  M ++  +PNVVT
Sbjct: 271 ADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVT 330

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           ++++IDG  K+ R  +A  +  ++    +  D+V++N +++   K G FE+A  + +EM 
Sbjct: 331 FNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMV 390

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           +  ++ D +T+ AL+ G  K G+ +  R + + M    V PN++TY+ L+    K G  +
Sbjct: 391 AKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIE 450

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           E  +   E   +G   + + Y +L+ ALC+    + A+ L+ ++   G  P+ VTYN ++
Sbjct: 451 EPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILV 510

Query: 552 DAFGRSATTECTVDDVERDLGK 573
           D   +S  TE  +  +E  +GK
Sbjct: 511 DGLWKSGKTEQAITVLEEMVGK 532



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 171/324 (52%), Gaps = 7/324 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+++ L +  K++ A  + E+ +++G    V  +S L+ A+ ++    EA+ + + M  
Sbjct: 262 NALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS 321

Query: 257 YNLKPNLVTYNAVIDACGKG---GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
               PN+VT+N++ID   K    G  F+  +++++ ML     PD++TFN L+A   + G
Sbjct: 322 RGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRML----VPDKVTFNILIAGACKAG 377

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            +E A  LF EMV + +  D+ T+  L+D +CK  Q++ A +I+  M    + PNVVTY+
Sbjct: 378 NFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYN 437

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            ++ G  K+GR+++      EM   G   + ++Y +++    +  R ++AL +  +++S 
Sbjct: 438 VLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSF 497

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G   D VTYN L+ G  K GK ++   + E+M      P+  T++       + G     
Sbjct: 498 GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGT 557

Query: 494 MQIFREFKQAGLKADVVLYSALID 517
           M++ R     G+  D    S+++D
Sbjct: 558 MELLRVVLAKGMLPDATTCSSILD 581



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 173/344 (50%), Gaps = 5/344 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           FS LI    + G   EA +  + M      PN+VTYNA+++  C    ++  H   + + 
Sbjct: 228 FSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHA--MIES 283

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M+  GV PD IT++ L+    +    + A  L + M  RG   ++ T+N+++D +CK  +
Sbjct: 284 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 343

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              AF+I  ++  + + P+ VT++ +I G  KAG  + A  +F EM    +  D +++  
Sbjct: 344 SGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGA 403

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    K G+ E A  +   M + G+  + VTYN L+ G  K G+ +E     E+M +  
Sbjct: 404 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSG 463

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P  +TY +L+    +     +A+Q+  + K  G   D V Y+ L+D L K+G  E A+
Sbjct: 464 CVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAI 523

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           ++L+EM  +G +P+  T+ +      RS     T++ +   L K
Sbjct: 524 TVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAK 567



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 188/361 (52%), Gaps = 13/361 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L + G+ D A N  +  +  GY   V  ++AL++   ++   + A ++  SM  
Sbjct: 229 STLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVD 286

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSR--- 311
             + P+++TY+ ++DA C    VD    +E+   M   G  P+ +TFNS++  +C     
Sbjct: 287 KGVTPDVITYSVLVDAFCKASRVD--EALELLHGMASRGCTPNVVTFNSIIDGLCKSDRS 344

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
           G  ++ A  ++N M    +  D  T+N L+   CK    + A  +  EM AKN+ P+V+T
Sbjct: 345 GEAFQIALQVYNRM----LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMT 400

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           +  +IDG  KAG+++ A ++   M  LG+  + V+YN ++    K GR EE     +EM 
Sbjct: 401 FGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMV 460

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           SSG   +++TY +L+    +  + D+  ++  ++K+    P+ +TY+ L+D   K G  +
Sbjct: 461 SSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTE 520

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +A+ +  E    G + D   ++A    L ++G +   + LL  +  +G+ P+  T +SI+
Sbjct: 521 QAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580

Query: 552 D 552
           D
Sbjct: 581 D 581


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 190/381 (49%), Gaps = 26/381 (6%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A ++F+  + EG+   V  +  LI+   + G    AI +  SM + N +PN+  Y
Sbjct: 145 GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY 204

Query: 267 NAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           N +ID+  K     + V E   +F +M+  G+ PD  T+NSL+        W+    L N
Sbjct: 205 NTIIDSLCKD----RQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLN 260

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EMV   I  D+ ++NT++DA+CK  ++  A +++ +M  + + PNVVTY+ ++DG+    
Sbjct: 261 EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLS 320

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE-------------------EAL 424
            +D+A+ +F  M   G   + +SYNT+++ Y K+ R +                   EA+
Sbjct: 321 EMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAV 380

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            V   M   G   + ++YN L+ GY K  + D+   +F +M    + P+ +TYSTLI   
Sbjct: 381 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 440

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
                 ++A+ +F E        ++V Y  L+D LCKN  +  A++LL  +    + P++
Sbjct: 441 CHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDI 500

Query: 545 VTYNSIIDAFGRSATTECTVD 565
              N  ID   R+   E   D
Sbjct: 501 QVNNIAIDGMCRAGELEAARD 521



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 141/551 (25%), Positives = 249/551 (45%), Gaps = 63/551 (11%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+    L +V  A ++    L  G+      F+ LI      G   EA+ +F+ M    
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +P++VTY  +I+   K G +    + +   M++   QP+   +N+++    +      A
Sbjct: 162 FRPDVVTYGTLINGLCKVG-NTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            NLF+EMV +GI  DIFTYN+L+ A+C   +      ++ EM    I P+VV+++T++D 
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDA 280

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K G++ +A ++  +M   G+  + V+Y  ++  +  L   +EA+ V   M   G   +
Sbjct: 281 LCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340

Query: 439 AVTYNALLGGYGKQGK-------------------YDEVRRMFEQMKADCVSPNLLTYST 479
            ++YN L+ GY K  +                    DE  ++F+ M      PN+++Y+T
Sbjct: 341 VISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNT 400

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LI+ Y K     +AM +F E  +  L  D V YS LI  LC    ++ A++L  EM    
Sbjct: 401 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACS 460

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
             PN+VTY  ++D   ++      +      L K  E +NLD        D+Q      +
Sbjct: 461 QIPNLVTYRILLDYLCKNRYLAEAM-----ALLKAIEGSNLDP-------DIQVNNIAID 508

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
            + +  G+L A +                   +F  +    ++P+V T+S ++N   R  
Sbjct: 509 GMCRA-GELEAAR------------------DLFSNLSSKGLQPDVWTYSIMINGLCRRG 549

Query: 660 SFEDASMLLEELR----LFDNQVYG-VAHGLLMGYRDNIWVQALSLFDEVKL----MDSS 710
             ++AS L  E+       +  +Y  +  G L   R+N   +A+ L  E+       D+S
Sbjct: 550 LLDEASKLFREMDENGCTLNGCIYNTITRGFL---RNNETSRAIQLLQEMVARGFSADAS 606

Query: 711 TASAFYNALTD 721
           T + F   L+D
Sbjct: 607 TMTLFVKMLSD 617



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 128/558 (22%), Positives = 242/558 (43%), Gaps = 97/558 (17%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           F+ L+++  +  +    +S+ + M  + + PN+ T + +I++ C    V F     +   
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGF--AFSVLAK 121

Query: 290 MLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +L+ G QPD  TF +L+  +C  G + EA  +LF++M+  G   D+ TY TL++ +CK  
Sbjct: 122 ILKLGHQPDTATFTTLIRGICVEGKIGEAL-HLFDKMIGEGFRPDVVTYGTLINGLCKVG 180

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
               A  ++  M  KN  PNV  Y+T+ID   K  ++ +A N+FSEM   GI  D  +YN
Sbjct: 181 NTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYN 240

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           +++     L  ++    +  EM  S I  D V++N ++    K+GK  E   + ++M   
Sbjct: 241 SLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR 300

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV--- 525
            V PN++TY+ L+D +       EA+++F      G   +V+ Y+ LI+  CK   +   
Sbjct: 301 GVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 360

Query: 526 ----------------ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
                           + AV + D M  +G  PNV++YN++I+ +       C +  +++
Sbjct: 361 IHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGY-------CKIQRIDK 413

Query: 570 DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI 629
            +                                +FG++             CRQE++  
Sbjct: 414 AM-------------------------------YLFGEM-------------CRQELI-- 427

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY 689
                        P+ VT+S +++        +DA  L  E+         V + +L+ Y
Sbjct: 428 -------------PDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 474

Query: 690 --RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN 747
             ++    +A++L   ++  +        N   D +   G+   A+ +      + +  +
Sbjct: 475 LCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 534

Query: 748 VWSESCLDLHLMSSGAAR 765
           VW+ S     +M +G  R
Sbjct: 535 VWTYS-----IMINGLCR 547



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 205/423 (48%), Gaps = 26/423 (6%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   G  S AI+     V++  + N      + +I  L +  +V  A N+F  
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA--YNTIIDSLCKDRQVTEAFNLFSE 226

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            + +G    ++ +++LI A       +   ++ N M    + P++V++N V+DA C +G 
Sbjct: 227 MVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGK 286

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           V   H  ++ D M++ GV+P+ +T+ +L+   C    + EA + +F+ MV +G   ++ +
Sbjct: 287 VTEAH--DVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVK-VFDTMVCKGCMPNVIS 343

Query: 337 YNTLLDAICKGAQ-------------------MDLAFEIMAEMPAKNISPNVVTYSTMID 377
           YNTL++  CK  +                   MD A ++   M  K   PNV++Y+T+I+
Sbjct: 344 YNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLIN 403

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GY K  R+D A+ +F EM    +  D V+Y+T++     + R ++A+ +  EM +     
Sbjct: 404 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 463

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + VTY  LL    K     E   + + ++   + P++   +  ID   + G  + A  +F
Sbjct: 464 NLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 523

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
                 GL+ DV  YS +I+ LC+ GL++ A  L  EM + G   N   YN+I   F R+
Sbjct: 524 SNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRN 583

Query: 558 ATT 560
             T
Sbjct: 584 NET 586



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/392 (23%), Positives = 171/392 (43%), Gaps = 20/392 (5%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L N  EW          V  +   +      + ++  L + GKV  A ++ + 
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS--FNTVVDALCKEGKVTEAHDVVDK 296

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +  G    V  ++AL+  +       EA+ VF++M      PN+++YN +I+  C    
Sbjct: 297 MIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 356

Query: 278 VD-----------------FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           +D                     V++FD M+  G  P+ I++N+L+    +    + A  
Sbjct: 357 IDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMY 416

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           LF EM  + +  D  TY+TL+  +C   ++  A  +  EM A +  PN+VTY  ++D   
Sbjct: 417 LFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLC 476

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K   L +A+ +   ++   +  D    N  +    + G  E A  +   + S G++ D  
Sbjct: 477 KNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVW 536

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY+ ++ G  ++G  DE  ++F +M  +  + N   Y+T+   + +      A+Q+ +E 
Sbjct: 537 TYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 596

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
              G  AD    +  +  L  +GL +S   +L
Sbjct: 597 VARGFSADASTMTLFVKMLSDDGLDQSLKQIL 628



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 178/438 (40%), Gaps = 35/438 (7%)

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A + FN M+          +N LL +I K         +  +M +  I PN+ T   +
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+ +    R+  A ++ +++  LG   D  ++ T++      G+  EAL +  +M   G 
Sbjct: 103 INSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGF 162

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R D VTY  L+ G  K G      R+   M      PN+  Y+T+ID   K     EA  
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFN 222

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F E    G+  D+  Y++LI ALC     +   +LL+EM    I P+VV++N+++DA  
Sbjct: 223 LFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALC 282

Query: 556 RSATTECTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRT-DNQIIK----- 603
           +        D V++ + +  E      +A +D  C   + D  EA +  D  + K     
Sbjct: 283 KEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMD--EAVKVFDTMVCKGCMPN 340

Query: 604 -------VFGQLVAEKAGQGKKENRCRQEILCILG------VFQKMHKLKIKPNVVTFSA 650
                  + G    ++  +            C L       VF  M      PNV++++ 
Sbjct: 341 VISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNT 400

Query: 651 ILNACSRCNSFEDASMLLEEL----RLFDNQVYG-VAHGLLMGYRDNIWVQALSLFDEVK 705
           ++N   +    + A  L  E+     + D   Y  + HGL    R      A++LF E+ 
Sbjct: 401 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVER---LQDAIALFHEMV 457

Query: 706 LMDSSTASAFYNALTDML 723
                     Y  L D L
Sbjct: 458 ACSQIPNLVTYRILLDYL 475



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 153/314 (48%), Gaps = 24/314 (7%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR--------------SGYC-----QE 246
           L ++D A  +F+T + +G    V +++ LI+ Y +                 C      E
Sbjct: 319 LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDE 378

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A+ VF++M      PN+++YN +I+  C    +D    + +F +M R  + PD +T+++L
Sbjct: 379 AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID--KAMYLFGEMCRQELIPDTVTYSTL 436

Query: 306 L-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           +  +C    L +A   LF+EMV      ++ TY  LLD +CK   +  A  ++  +   N
Sbjct: 437 IHGLCHVERLQDAIA-LFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSN 495

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           + P++   +  IDG  +AG L+ A ++FS +   G+  D  +Y+ +++   + G  +EA 
Sbjct: 496 LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEAS 555

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            + +EM+ +G   +   YN +  G+ +  +     ++ ++M A   S +  T +  + + 
Sbjct: 556 KLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 615

Query: 485 SKGGLYKEAMQIFR 498
           S  GL +   QI R
Sbjct: 616 SDDGLDQSLKQILR 629



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 134/329 (40%), Gaps = 72/329 (21%)

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI--------- 435
           +D A++ F+ M  +      V +N +L+  AK+      L +  +M+S GI         
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 436 --------------------------RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
                                     + D  T+  L+ G   +GK  E   +F++M  + 
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P+++TY TLI+   K G    A+++     Q   + +V  Y+ +ID+LCK+  V  A 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
           +L  EM  +GI P++ TYNS+I A        C    V   L +  +S  +  + S    
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHAL----CNLCEWKHVATLLNEMVDSKIMPDVVS---- 273

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
                          F  +V     +GK              V  KM +  ++PNVVT++
Sbjct: 274 ---------------FNTVVDALCKEGKVTEA--------HDVVDKMIQRGVEPNVVTYT 310

Query: 650 AILNACSRCNSFEDASMLLEELRLFDNQV 678
           A+++     +  ++A      +++FD  V
Sbjct: 311 ALMDGHCLLSEMDEA------VKVFDTMV 333


>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
 gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 205/401 (51%), Gaps = 5/401 (1%)

Query: 158 DYTFLLREL--GNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
           +Y+ ++R L   NR   S  +Q     + R++ + D  +L + +I    + G +D A   
Sbjct: 236 NYSLIIRSLMKNNRAN-SSILQKIYREIDRDKLEVDV-QLWNDIIVGFAKAGDLDKALEF 293

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
                  G          +I   G  G  +EA ++F  M+   L+P    YNA++    K
Sbjct: 294 LGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVK 353

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            G+  +    +  +M R+GV P+  T++ L+        WE+AR +  EM    +  + +
Sbjct: 354 AGL-LRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAY 412

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            ++ +L +     +    F+++ EM    + P+ + Y+ +ID + K   LD A+  F  M
Sbjct: 413 VFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRM 472

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              GI  D +++NT++  + K G+ + A  + +EM   G      T+N ++  +G Q ++
Sbjct: 473 LSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERW 532

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D+V+ +   M++  + PN +TY+TLID+Y K G + +A++   + K AGLK    +Y+AL
Sbjct: 533 DDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNAL 592

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           ++A  + GL + AVS    M  +G++P+++  NS+I+AFG+
Sbjct: 593 LNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGK 633



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 186/375 (49%), Gaps = 34/375 (9%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           LG  G+ + A+ IFE   + G      A++AL+  Y ++G  ++A  V + M+R  + PN
Sbjct: 316 LGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPN 375

Query: 263 LVTYNAVIDACG----------------------------------KGGVDFKHVVEIFD 288
             TY+ +IDA G                                  +   +++   ++  
Sbjct: 376 EQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLR 435

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +M  +GV+PDRI +N L+    +    + A   F+ M+  GI+ D  T+NTL+D  CK  
Sbjct: 436 EMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAG 495

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           + D A E+  EM  K   P   T++ MI+ +    R DD  N+ + M+  G+  + V+Y 
Sbjct: 496 KHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYT 555

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T++ IY K GRF++A+    +M+++G++  +  YNALL  Y ++G  D+    F  M+ D
Sbjct: 556 TLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDD 615

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + P+LL  ++LI+ + K     EA  + +  K+  LK DVV Y+ L+ AL      +  
Sbjct: 616 GLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKV 675

Query: 529 VSLLDEMTKEGIRPN 543
            S+ +EM   G  P+
Sbjct: 676 PSVYEEMILSGCTPD 690



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 127/540 (23%), Positives = 237/540 (43%), Gaps = 87/540 (16%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGN-TVYAFSALISAYGRSGYCQEAISVFNS 253
           L S +I  LG+      ++ ++E  L     N T   ++ALISA  R+   ++A+++   
Sbjct: 171 LYSILIHALGQ------SEKLYEAFLLSQKQNLTPLTYNALISACARNNDIEKALNLICR 224

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE-IFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M+      +LV Y+ +I +  K       +++ I+ ++ R+ ++ D   +N ++   ++ 
Sbjct: 225 MREDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKA 284

Query: 313 G---------------------------LW--------EAARNLFNEMVHRGIDQDIFTY 337
           G                           +W        E A  +F EM   G+      Y
Sbjct: 285 GDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAY 344

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N LL    K   +  A  +++EM    + PN  TYS +ID Y  A R + A  +  EM+ 
Sbjct: 345 NALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEA 404

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             +  +   ++ +L+ Y   G +++   V +EME SG+R D + YN L+  +GK    D 
Sbjct: 405 SNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDH 464

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
               F++M ++ + P+ +T++TL+D + K G +  A ++F E  + G       ++ +I+
Sbjct: 465 AMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMIN 524

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA----TTECTVDDV------ 567
           +       +   +LL  M  +G+ PN VTY ++ID +G+S       EC +DD+      
Sbjct: 525 SFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIEC-LDDMKAAGLK 583

Query: 568 --------------ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
                         +R L  Q  S    A  +  D  ++ +    N +I  FG       
Sbjct: 584 PSSTMYNALLNAYAQRGLSDQAVS----AFWAMRDDGLKPSLLALNSLINAFG------- 632

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
                  + R+++   + V Q M +  +KP+VVT++ ++ A      F+    + EE+ L
Sbjct: 633 -------KDRRDVEAFV-VLQYMKENDLKPDVVTYTTLMKALILVEKFDKVPSVYEEMIL 684



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 168/343 (48%), Gaps = 11/343 (3%)

Query: 181 FAVKREERK----NDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALIS 236
           F V   ER     N+Q    S +I   G   + + A+ + +           Y FS +++
Sbjct: 362 FVVSEMERSGVLPNEQT--YSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILA 419

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQ 296
           +Y   G  Q+   V   M+   ++P+ + YN +ID  GK      H +  FD ML  G++
Sbjct: 420 SYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNC-LDHAMATFDRMLSEGIE 478

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           PD IT+N+L+    + G  + A  LF EM+ +G      T+N ++++     + D    +
Sbjct: 479 PDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNL 538

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           +  M ++ + PN VTY+T+ID Y K+GR DDA+    +MK  G+      YN +L+ YA+
Sbjct: 539 LTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQ 598

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
            G  ++A+     M   G++   +  N+L+  +GK  +  E   + + MK + + P+++T
Sbjct: 599 RGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVT 658

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGL----KADVVLYSAL 515
           Y+TL+        + +   ++ E   +G     KA  +L SAL
Sbjct: 659 YTTLMKALILVEKFDKVPSVYEEMILSGCTPDRKARAMLRSAL 701



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/464 (23%), Positives = 205/464 (44%), Gaps = 75/464 (16%)

Query: 247 AISVFNSMKRYNLKPNL-VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A +V + ++++NL  +  + Y+ +I A G+     + + E F    +  + P  +T+N+L
Sbjct: 152 AYAVVSWLQKHNLCFSYELLYSILIHALGQS----EKLYEAFLLSQKQNLTP--LTYNAL 205

Query: 306 LAVCSRGGLWEAARNLFNEM--------------------------------VHRGIDQ- 332
           ++ C+R    E A NL   M                                ++R ID+ 
Sbjct: 206 ISACARNNDIEKALNLICRMREDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRD 265

Query: 333 ----DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
               D+  +N ++    K   +D A E +  +    +S    T  T+I G    GR ++A
Sbjct: 266 KLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEA 325

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             +F EM+  G+     +YN +L  Y K G   +A  V  EME SG+  +  TY+ L+  
Sbjct: 326 EAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDA 385

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           YG   +++  R + ++M+A  V PN   +S ++  Y   G +++  Q+ RE + +G++ D
Sbjct: 386 YGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPD 445

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            + Y+ LID   K   ++ A++  D M  EGI P+ +T+N+++D   ++           
Sbjct: 446 RIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKA----------- 494

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
              GK   +  L       +K       T N +I  FG        Q + ++        
Sbjct: 495 ---GKHDRAEEL--FEEMMEKGYLPCNTTFNIMINSFGD-------QERWDD-------- 534

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           +  +   M    + PN VT++ +++   +   F+DA   L++++
Sbjct: 535 VKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMK 578



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 11/151 (7%)

Query: 153 LCGADDYTFLLRELGNRGEWSKAIQCF----AFAVKREERKNDQGKLASAMISILGRLGK 208
           L  A  YT L+   G  G +  AI+C     A  +K          + +A+++   + G 
Sbjct: 548 LPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLK------PSSTMYNALLNAYAQRGL 601

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
            D A + F    ++G   ++ A ++LI+A+G+     EA  V   MK  +LKP++VTY  
Sbjct: 602 SDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTT 661

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDR 299
           ++ A       F  V  ++++M+ +G  PDR
Sbjct: 662 LMKALILVE-KFDKVPSVYEEMILSGCTPDR 691


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 220/445 (49%), Gaps = 16/445 (3%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           ++++ +I+   R+G   +A+ VF+ M    + PN +TYN +ID   KGG D +    + D
Sbjct: 16  FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGG-DLEAGFRLRD 74

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M+ +G++P+ IT+N LL+   R G       L +EM  + +  D FTY+ L D + +  
Sbjct: 75  QMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNG 134

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
                  +  +     ++    T S +++G  K G++  A  +   +   G+   RV YN
Sbjct: 135 DSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYN 194

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+++ Y + G  E A     +M+S  I+ D +TYNAL+ G  K  +    + +  +M+ +
Sbjct: 195 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 254

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V+P + T++TLID Y + G  ++   +  E ++ GLK +VV Y ++++A CKNG +  A
Sbjct: 255 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 314

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER----DLGKQKESANL--DA 582
           V++LD+M  + + PN   YN+IIDA+      +     VE+     +     + NL    
Sbjct: 315 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 374

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC--RQEILCILGVFQKMHKLK 640
           +C+Q    + EA    N +     +L+ +        + C  R  I   L + Q+MHK  
Sbjct: 375 LCNQ--SQISEAEEIINSLSN--HRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 430

Query: 641 IKPNVVTFSAI---LNACSRCNSFE 662
           IK  V T+  +   L    R N  E
Sbjct: 431 IKSTVRTYHQLISGLGGAGRLNEME 455



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 183/358 (51%), Gaps = 1/358 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ + R G+   A  +F+             ++ +I  + + G  +    + + M  
Sbjct: 19  NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 78

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           + LKPN +TYN ++    + G        + D+M    + PD  T++ L    SR G  +
Sbjct: 79  HGLKPNAITYNVLLSGLCRAG-RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 137

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           A  +LF + +  G+    +T + LL+ +CK  ++ +A E++  +    + P  V Y+T+I
Sbjct: 138 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 197

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY + G L+ A + F +MK   I  D ++YN +++   K  R   A  +  EM+ +G+ 
Sbjct: 198 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 257

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
               T+N L+  YG+ G+ ++   +  +M+ + + PN+++Y ++++ + K G   EA+ I
Sbjct: 258 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 317

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             +     +  +  +Y+A+IDA  ++G  + A  L+++M   GI P++VTYN +I   
Sbjct: 318 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 375



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 180/380 (47%), Gaps = 3/380 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L   L   G+    +  F   +K      D     S +++ L + GKV +A+ + ++
Sbjct: 123 YSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY--TCSILLNGLCKDGKVSIAEEVLQS 180

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +N G   T   ++ LI+ Y ++G  + A S F  MK  ++KP+ +TYNA+I+   K   
Sbjct: 181 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE- 239

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
              +  ++  +M  NGV P   TFN+L+    R G  E    + +EM   G+  ++ +Y 
Sbjct: 240 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG 299

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           ++++A CK  ++  A  I+ +M  K++ PN   Y+ +ID Y + G  D A  +  +MK  
Sbjct: 300 SIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 359

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI    V+YN ++       +  EA  +   + +  +  DAV+YN L+     +G  D+ 
Sbjct: 360 GISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKA 419

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + ++M    +   + TY  LI      G   E   ++++  Q  +     +++ +++A
Sbjct: 420 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 479

Query: 519 LCKNGLVESAVSLLDEMTKE 538
             K G    A  L  EM ++
Sbjct: 480 YSKYGNEIKAEDLRKEMLQK 499



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 177/389 (45%), Gaps = 42/389 (10%)

Query: 290 MLRNGVQP-DRITFNSLLAVCSRGGLWEAARN-----LFNEMVHRGIDQDIFTYNTLLDA 343
           M R+G  P +  ++N ++A     G+W A R      +F+EM  R +  +  TYNT++D 
Sbjct: 5   MGRDGAPPPNAFSYNVVIA-----GMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDG 59

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
             KG  ++  F +  +M    + PN +TY+ ++ G  +AGR+ +   +  EM    +  D
Sbjct: 60  HIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPD 119

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +Y+ +    ++ G  +  L +  +   +G+     T + LL G  K GK      + +
Sbjct: 120 GFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQ 179

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
            +    + P  + Y+TLI+ Y + G  + A   F + K   +K D + Y+ALI+ LCK  
Sbjct: 180 SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 239

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
            + +A  LL EM   G+ P V T+N++IDA+GR+   E                      
Sbjct: 240 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE---------------------K 278

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
           C     ++QE G   N  +  +G +V      GK        I   + +   M    + P
Sbjct: 279 CFIVLSEMQENGLKPN--VVSYGSIVNAFCKNGK--------IPEAVAILDDMFHKDVLP 328

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELR 672
           N   ++AI++A       + A +L+E+++
Sbjct: 329 NAQVYNAIIDAYVEHGPNDQAFILVEKMK 357


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 203/396 (51%), Gaps = 5/396 (1%)

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           +  ++ F  M R  V P   + N LL   ++ G  +  +  F +M+  G    +FTYN +
Sbjct: 42  EEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIM 101

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +D +CK   ++ A  +  EM  + + P+ VTY++MIDG+ K GRLDD +  F EMK +  
Sbjct: 102 IDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 161

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D ++YN +++ + K G+  + L   +EM+ +G++ + V+Y+ L+  + K+G   +  +
Sbjct: 162 EPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIK 221

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
            +  M+   + PN  TY++LID Y K G   +A ++  E  Q G++ +VV Y+ALID LC
Sbjct: 222 FYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLC 281

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD---DVERDLGKQKES 577
                   + LLDEM +  I+  VVT+  +ID   ++      +D    +  D G Q  +
Sbjct: 282 GWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANA 341

Query: 578 ANLDAMCSQDDKDVQ-EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQK 635
           A   AM     K  Q EA  T  + +   G +    A     +   +Q  +L  L +  K
Sbjct: 342 AIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 401

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           M +  +K +++ +++++   S CN  + A   LEE+
Sbjct: 402 MVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 437



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 191/391 (48%), Gaps = 4/391 (1%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           L   L + G   +AIQCF+  +KR  R   + +  + ++    +LGK D  K  F+  + 
Sbjct: 31  LFSVLIDLGMVEEAIQCFS-KMKRF-RVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIG 88

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
            G   TV+ ++ +I    + G  + A  +F  MK   L P+ VTYN++ID  GK G    
Sbjct: 89  AGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVG-RLD 147

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             V  F++M     +PD IT+N+L+    + G        F EM   G+  ++ +Y+TL+
Sbjct: 148 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLV 207

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           DA CK   M  A +   +M    + PN  TY+++ID Y K G L DA  + +EM  +G+ 
Sbjct: 208 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVE 267

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + V+Y  ++          E L +  EM    I+   VT+  L+ G  K     +    
Sbjct: 268 WNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDY 327

Query: 462 FEQMKADC-VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           F ++  D  +  N   Y+ +ID   KG   + A  +F +  Q GL  D   Y++L+D   
Sbjct: 328 FGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNF 387

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           K G V  A++L D+M + G++ +++ Y S++
Sbjct: 388 KQGNVLEALALRDKMVETGMKLDLLAYTSLV 418



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 175/367 (47%), Gaps = 41/367 (11%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL----------------------- 259
           G+G     F AL S     G  +EAI  F+ MKR+ +                       
Sbjct: 24  GFG----VFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGV 79

Query: 260 ------------KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA 307
                       KP + TYN +ID   K G D +    +F++M   G+ PD +T+NS++ 
Sbjct: 80  KRFFKDMIGAGAKPTVFTYNIMIDCMCKEG-DVEAARGLFEEMKFRGLIPDTVTYNSMID 138

Query: 308 VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
              + G  +     F EM     + D+ TYN L++  CK  ++    E   EM    + P
Sbjct: 139 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKP 198

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           NVV+YST++D + K G +  A+  + +M+ +G+  +  +Y +++  Y K+G   +A  + 
Sbjct: 199 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLA 258

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
            EM   G+  + VTY AL+ G        E   + ++M    +   ++T+  LID   K 
Sbjct: 259 NEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKN 318

Query: 488 GLYKEAMQIF-REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            L  +A+  F R     GL+A+  +Y+A+ID LCK   VE+A +L ++M ++G+ P+   
Sbjct: 319 KLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTA 378

Query: 547 YNSIIDA 553
           Y S++D 
Sbjct: 379 YTSLMDG 385



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 167/343 (48%), Gaps = 4/343 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI   G++G++D     FE   +      V  ++ALI+ + + G   + +  F  MKR
Sbjct: 134 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKR 193

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             LKPN+V+Y+ ++DA  K G+  +  ++ + DM R G+ P+  T+ SL+ A C  G L 
Sbjct: 194 NGLKPNVVSYSTLVDAFCKEGM-MQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLS 252

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +A R L NEM+  G++ ++ TY  L+D +C          ++ EM   +I   VVT+  +
Sbjct: 253 DAFR-LANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVL 311

Query: 376 IDGYAKAGRLDDALNMFSEMKF-LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           IDG  K   +  A++ F  +    G+  +   Y  ++    K  + E A  + ++M   G
Sbjct: 312 IDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKG 371

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  D   Y +L+ G  KQG   E   + ++M    +  +LL Y++L+   S     ++A 
Sbjct: 372 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKAR 431

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
               E    G+  D VL  +++    + G +  AV L   + K
Sbjct: 432 SFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVELQSYLMK 474


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 214/420 (50%), Gaps = 39/420 (9%)

Query: 179 FAFAVKREERK-NDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALI 235
           FAF+V  +  K   Q  +A+   +I  L   GK+    ++F+  + EG+   V  +  LI
Sbjct: 112 FAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLI 171

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG----------------GV- 278
           +   + G    AI +  SM++ N +P++V Y ++ID+  K                 G+ 
Sbjct: 172 NGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGIS 231

Query: 279 -----------------DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARN 320
                            ++KHV  + ++M+ + + P+ + F++++ A+C  G + EA  +
Sbjct: 232 PSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEA-HD 290

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           + + M+ RG++ ++ TYN L+D  C  ++MD A ++   M  K  +P+VV+YST+I+GY 
Sbjct: 291 VVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYC 350

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K  R++ A+ +F EM    +  + V+Y+T++     +GR ++A+ +  EM + G   D V
Sbjct: 351 KIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFV 410

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           +Y  LL    K  + DE   + + ++   + P++  Y+ +ID   + G  + A  +F   
Sbjct: 411 SYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNL 470

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
              GL  +V  Y+ +I+ LC+ GL+  A  L  EM ++G  PN  TYN I   F R+  T
Sbjct: 471 SSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNET 530



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 216/421 (51%), Gaps = 18/421 (4%)

Query: 142 LGDILKKFEFKLCGAD------DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL 195
           +G++L  F+ K+ G         Y  L+  L   G  S AI+     ++  E+ N Q  +
Sbjct: 145 IGEVLHLFD-KMIGEGFQPNVVTYGTLINGLCKVGSTSAAIR----LLRSMEQGNCQPDV 199

Query: 196 A--SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
              +++I  L +  +V  A N+F   +++G   +++ +++LI A       +   ++ N 
Sbjct: 200 VVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNE 259

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSR 311
           M    + PN+V ++ V+DA C +G V   H  ++ D M++ GV+P+ +T+N+L+   C R
Sbjct: 260 MVNSKIMPNVVIFSTVVDALCKEGKVMEAH--DVVDMMIKRGVEPNVVTYNALMDGHCLR 317

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
             + EA + +F+ MV +G   D+ +Y+TL++  CK  +++ A  +  EM  K + PN VT
Sbjct: 318 SEMDEAVK-VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVT 376

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           YST++ G    GRL DA+ +F EM   G   D VSY  +L    K  R +EA+ + K +E
Sbjct: 377 YSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE 436

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            S +  D   Y  ++ G  + G+ +  R +F  + +  + PN+ TY+ +I+   + GL  
Sbjct: 437 GSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLA 496

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA ++F E K+ G   +   Y+ +     +N      + LL EM   G   +V T   ++
Sbjct: 497 EASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLV 556

Query: 552 D 552
           +
Sbjct: 557 E 557



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 181/367 (49%), Gaps = 1/367 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+    L ++  A ++    L  G+   +  F+ LI      G   E + +F+ M    
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +PN+VTY  +I+   K G      + +   M +   QPD + + S++    +      A
Sbjct: 160 FQPNVVTYGTLINGLCKVG-STSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 218

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            NLF+EM+H+GI   IFTYN+L+ A+C   +      ++ EM    I PNVV +ST++D 
Sbjct: 219 FNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDA 278

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K G++ +A ++   M   G+  + V+YN ++  +      +EA+ V   M   G   D
Sbjct: 279 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 338

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            V+Y+ L+ GY K  + ++   +FE+M    + PN +TYSTL+      G  ++A+ +F 
Sbjct: 339 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFH 398

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E    G   D V Y  L+D LCKN  ++ A++LL  +    + P++  Y  +ID   R+ 
Sbjct: 399 EMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAG 458

Query: 559 TTECTVD 565
             E   D
Sbjct: 459 ELEAARD 465



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 233/507 (45%), Gaps = 42/507 (8%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G    +Y  + LI+++        A SV   + +   +PN+ T+N +I   C +G +   
Sbjct: 89  GIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIG-- 146

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            V+ +FD M+  G QP+ +T+ +L+    + G   AA  L   M       D+  Y +++
Sbjct: 147 EVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSII 206

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           D++CK  Q+  AF + +EM  + ISP++ TY+++I              + +EM    I 
Sbjct: 207 DSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIM 266

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + V ++TV+    K G+  EA  V   M   G+  + VTYNAL+ G+  + + DE  ++
Sbjct: 267 PNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKV 326

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F+ M     +P++++YSTLI+ Y K    ++AM +F E  +  L  + V YS L+  LC 
Sbjct: 327 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 386

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
            G ++ A++L  EM   G  P+ V+Y  ++D   ++        D    L K  E +N+D
Sbjct: 387 VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRL-----DEAIALLKAIEGSNMD 441

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLK 640
                           D QI  +              +  CR  E+     +F  +    
Sbjct: 442 P---------------DIQIYTIV------------IDGMCRAGELEAARDLFSNLSSKG 474

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQAL 698
           + PNV T++ ++N   +     +AS L  E++       G  + L+  G+ R+N  ++ +
Sbjct: 475 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGI 534

Query: 699 SLFDEVKL----MDSSTASAFYNALTD 721
            L  E+       D ST++     L+D
Sbjct: 535 QLLQEMLARGFSADVSTSTVLVEMLSD 561



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 108/467 (23%), Positives = 211/467 (45%), Gaps = 35/467 (7%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F+ ML     P    F  LL   ++   +    +L ++M   GI  +I+T N L+++ C 
Sbjct: 47  FNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCH 106

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  AF ++A++      PN+ T++T+I G    G++ + L++F +M   G   + V+
Sbjct: 107 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVT 166

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T+++   K+G    A+ + + ME    + D V Y +++    K  +  +   +F +M 
Sbjct: 167 YGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMI 226

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              +SP++ TY++LI        +K    +  E   + +  +VV++S ++DALCK G V 
Sbjct: 227 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 286

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM-CS 585
            A  ++D M K G+ PNVVTYN+++D         C   +++  +         D M C 
Sbjct: 287 EAHDVVDMMIKRGVEPNVVTYNALMDG-------HCLRSEMDEAVKV------FDTMVCK 333

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
               DV       N   K+                   Q I   + +F++M + ++ PN 
Sbjct: 334 GFAPDVVSYSTLINGYCKI-------------------QRIEKAMYLFEEMCRKELIPNT 374

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDE 703
           VT+S +++        +DA  L  E+         V++ +L+ Y  ++    +A++L   
Sbjct: 375 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 434

Query: 704 VKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
           ++  +       Y  + D +   G+   A+ +      + +  NVW+
Sbjct: 435 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWT 481



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 153/311 (49%), Gaps = 3/311 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V  FS ++ A  + G   EA  V + M +  ++PN+VTYNA++D  C +  +D    V++
Sbjct: 269 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMD--EAVKV 326

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           FD M+  G  PD +++++L+    +    E A  LF EM  + +  +  TY+TL+  +C 
Sbjct: 327 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 386

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A  +  EM  +   P+ V+Y  ++D   K  RLD+A+ +   ++   +  D   
Sbjct: 387 VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQI 446

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y  V+    + G  E A  +   + S G+  +  TY  ++ G  +QG   E  ++F +MK
Sbjct: 447 YTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 506

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
               SPN  TY+ +   + +       +Q+ +E    G  ADV   + L++ L  +GL +
Sbjct: 507 RKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQ 566

Query: 527 SAVSLLDEMTK 537
           S   +L E  +
Sbjct: 567 SVKQILSEFLQ 577



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 171/345 (49%), Gaps = 5/345 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L N  EW          V  +   N    + S ++  L + GKV  A ++ + 
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPN--VVIFSTVVDALCKEGKVMEAHDVVDM 294

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +  G    V  ++AL+  +       EA+ VF++M      P++V+Y+ +I+   K   
Sbjct: 295 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQ- 353

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             +  + +F++M R  + P+ +T+++L+  +C  G L +A   LF+EMV RG   D  +Y
Sbjct: 354 RIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIA-LFHEMVTRGQIPDFVSY 412

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             LLD +CK  ++D A  ++  +   N+ P++  Y+ +IDG  +AG L+ A ++FS +  
Sbjct: 413 CILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS 472

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  +  +Y  +++   + G   EA  +  EM+  G   +  TYN +  G+ +  +   
Sbjct: 473 KGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLR 532

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             ++ ++M A   S ++ T + L+++ S  GL +   QI  EF Q
Sbjct: 533 GIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 179/393 (45%), Gaps = 34/393 (8%)

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
           H         +NTL DA+        +F  M  M      P++  ++ ++    K     
Sbjct: 27  HNTFHSKSLNFNTLDDALS-------SFNRMLHMHPP---PSIADFTKLLISITKMKHYS 76

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
             L++  +M   GI  +  + N +++ +  L R   A  V  ++   G + +  T+N L+
Sbjct: 77  TVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLI 136

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G   +GK  EV  +F++M  +   PN++TY TLI+   K G    A+++ R  +Q   +
Sbjct: 137 RGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQ 196

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            DVV+Y+++ID+LCK+  V  A +L  EM  +GI P++ TYNS+I A       +  V  
Sbjct: 197 PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK-HVTA 255

Query: 567 VERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQIIK--VFGQLVAEKAGQGK 617
           +  ++   K   N       +DA+C +    V EA    + +IK  V   +V   A    
Sbjct: 256 LLNEMVNSKIMPNVVIFSTVVDALCKEG--KVMEAHDVVDMMIKRGVEPNVVTYNA---L 310

Query: 618 KENRC-RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL---RL 673
            +  C R E+   + VF  M      P+VV++S ++N   +    E A  L EE+    L
Sbjct: 311 MDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKEL 370

Query: 674 FDNQVY--GVAHGLLMGYRDNIWVQALSLFDEV 704
             N V    + HGL    R      A++LF E+
Sbjct: 371 IPNTVTYSTLMHGLCHVGR---LQDAIALFHEM 400


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 184/363 (50%), Gaps = 14/363 (3%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G    A  +F+  + +    TV  ++ LI          EA S+F +M+   + PNL 
Sbjct: 205 RQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLY 264

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TYN ++D   K     K  +E++ +ML +G+ P+ +TF  L+    +     +AR    +
Sbjct: 265 TYNTMMDGYCKIA-HVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLID 323

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G+  +IF YN L+D  CK   +  A  + +E+    I P+V TYS +I G     R
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +++A  +  EMK  G   + V+YNT++  Y K G  E+A+ VC +M   GI  + +T++ 
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ GY K GK +    ++ +M    + P+++ Y+ LID + K G  KEA ++ +E ++AG
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLL-------------DEMTKEGIRPNVVTYNSII 551
           L  +V   S LID LCK+G +  A+ L              +E+ +    PN V Y ++I
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563

Query: 552 DAF 554
              
Sbjct: 564 QGL 566



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 186/355 (52%), Gaps = 3/355 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G+ D    ++   +  G    V  +  LI    R G   +A  +F+ M    + P 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +V Y  +I   CG+  +       +F  M  +G+ P+  T+N+++    +    + A  L
Sbjct: 228 VVIYTILIRGLCGESRIS--EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           + EM+  G+  ++ T+  L+D +CK  +M  A + + +M +  + PN+  Y+ +IDGY K
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           AG L +AL++ SE++   I  D  +Y+ ++     + R EEA  + +EM+  G   +AVT
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN L+ GY K+G  ++   +  QM    + PN++T+STLID Y K G  + AM ++ E  
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             GL  DVV Y+ALID   K+G  + A  L  EM + G+ PNV T + +ID   +
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 207/413 (50%), Gaps = 18/413 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+     +G++ KA + F   +  E++      + + +I  L    ++  A+++F T
Sbjct: 196 YGTLIDGCCRQGDFLKAFRLFDEMI--EKKIFPTVVIYTILIRGLCGESRISEAESMFRT 253

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             N G    +Y ++ ++  Y +  + ++A+ ++  M    L PN+VT+  +ID   K   
Sbjct: 254 MRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTD- 312

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +     +   DM   GV P+   +N L+   C  G L EA  +L +E+    I  D+FTY
Sbjct: 313 EMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL-SLHSEIEKHEILPDVFTY 371

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           + L+  +C   +M+ A  ++ EM  K   PN VTY+T+IDGY K G ++ A+ + S+M  
Sbjct: 372 SILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE 431

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI  + ++++T++  Y K G+ E A+ +  EM   G+  D V Y AL+ G+ K G   E
Sbjct: 432 KGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKE 491

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF-------------REFKQAG 504
             R+ ++M+   + PN+ T S LID   K G   +A+++F              E  ++ 
Sbjct: 492 AFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSL 551

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
              + V+Y+ALI  LC +G +  A     +M   G+RP+V T   II    R+
Sbjct: 552 CSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRA 604



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 212/485 (43%), Gaps = 40/485 (8%)

Query: 208 KVDLAKN--IFETALNEGYGNTVYA-----FSALISAYGRSGYCQEAISVFNSMKRY--- 257
           + DLAKN  ++   ++   G  +YA        LI     S   +   SVFN + R    
Sbjct: 63  RADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNVLSRLESS 122

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
              PN+  +  +I A  + G+    V E      +  V P     N +L    + G ++ 
Sbjct: 123 KFTPNV--FGVLIIAFSEMGL----VEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDT 176

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
              ++ +MV RG   ++ TY TL+D  C+      AF +  EM  K I P VV Y+ +I 
Sbjct: 177 MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR 236

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G     R+ +A +MF  M+  G+  +  +YNT++  Y K+   ++AL + +EM   G+  
Sbjct: 237 GLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLP 296

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + VT+  L+ G  K  +    R+    M +  V PN+  Y+ LID Y K G   EA+ + 
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E ++  +  DV  YS LI  LC    +E A  LL EM K+G  PN VTYN++ID + + 
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416

Query: 558 ATTECTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
              E  ++   +   K  E      S  +D  C     +      T+  I  +   +VA 
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476

Query: 612 KA--------GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
            A        G  K+  R  +E          M +  + PNV T S +++   +     D
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKE----------MQEAGLHPNVFTLSCLIDGLCKDGRISD 526

Query: 664 ASMLL 668
           A  L 
Sbjct: 527 AIKLF 531



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 187/413 (45%), Gaps = 16/413 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+R L      S+A     F   R           + M+    ++  V  A  +++ 
Sbjct: 231 YTILIRGLCGESRISEAES--MFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQE 288

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L +G    V  F  LI    ++     A      M  + + PN+  YN +ID   K G 
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG- 347

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           +    + +  ++ ++ + PD  T++ L+         E A  L  EM  +G   +  TYN
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+D  CK   M+ A E+ ++M  K I PN++T+ST+IDGY KAG+++ A+ +++EM   
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D V+Y  ++  + K G  +EA  + KEM+ +G+  +  T + L+ G  K G+  + 
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA 527

Query: 459 RRMF-------------EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
            ++F              ++     SPN + Y+ LI      G   +A + F + + +GL
Sbjct: 528 IKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGL 587

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           + DV     +I    +   +   + L  ++ K GI PN   Y  +   +  S 
Sbjct: 588 RPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESG 640



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 14/291 (4%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V+ +S LI         +EA  +   MK+    PN VTYN +ID   K G + +  +E+ 
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEG-NMEKAIEVC 426

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
             M   G++P+ ITF++L+    + G  EAA  L+ EMV +G+  D+  Y  L+D   K 
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKD 486

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF-------------SE 394
                AF +  EM    + PNV T S +IDG  K GR+ DA+ +F             +E
Sbjct: 487 GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNE 546

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           +       + V Y  ++      GR  +A     +M  SG+R D  T   ++ G+ +   
Sbjct: 547 LDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMH 606

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
             +V  +   +    + PN   Y  L   Y + G  K A++   +    G+
Sbjct: 607 LRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGI 657



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 130/282 (46%), Gaps = 14/282 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L  + +++ A  + +    +G+      ++ LI  Y + G  ++AI V + M  
Sbjct: 372 SILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE 431

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++PN++T++ +ID   K G   +  + ++ +M+  G+ PD + + +L+    + G  +
Sbjct: 432 KGIEPNIITFSTLIDGYCKAG-KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTK 490

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA-------------EMPAK 363
            A  L  EM   G+  ++FT + L+D +CK  ++  A ++               E+   
Sbjct: 491 EAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRS 550

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
             SPN V Y+ +I G    GR+  A   FS+M+  G+  D  +   ++  + +     + 
Sbjct: 551 LCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDV 610

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +++  ++   GI  ++  Y  L  GY + G      R  E +
Sbjct: 611 MMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDL 652



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 104/219 (47%), Gaps = 16/219 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    + GK++ A  ++   + +G    V A++ALI  + + G  +EA  +   M+ 
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIF-------------DDMLRNGVQPDRITFN 303
             L PN+ T + +ID   K G      +++F             +++ R+   P+ + + 
Sbjct: 502 AGLHPNVFTLSCLIDGLCKDG-RISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYT 560

Query: 304 SLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           +L+  +C+ G +++A++  F++M   G+  D+FT   ++    +   +     + A++  
Sbjct: 561 ALIQGLCTDGRIFKASK-FFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILK 619

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             I PN   Y  +  GY ++G L  AL    ++  +GIG
Sbjct: 620 MGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIG 658



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 105/242 (43%), Gaps = 14/242 (5%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++ A  +      +G    +  FS LI  Y ++G  + A+ ++  M    L P++V Y
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF--- 322
            A+ID   K G + K    +  +M   G+ P+  T + L+  +C  G + +A +      
Sbjct: 477 TALIDGHFKDG-NTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKT 535

Query: 323 ---------NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
                    NE+       +   Y  L+  +C   ++  A +  ++M    + P+V T  
Sbjct: 536 GTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCI 595

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I G+ +A  L D + + +++  +GI  +   Y  +   Y + G  + AL   +++   
Sbjct: 596 VIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGI 655

Query: 434 GI 435
           GI
Sbjct: 656 GI 657


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 235/524 (44%), Gaps = 73/524 (13%)

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR---YNLKPNLVTY 266
           D    +F      GY   V++++ALI         QEA+ +   M     YN  PN+V+Y
Sbjct: 144 DAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSY 203

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N VID   K G                  + D+  F                  LF+EM+
Sbjct: 204 NTVIDGFFKEG------------------EVDKAYF------------------LFHEMM 227

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +G+  D+ TYN+L+D +CK   MD A  I+  M  K + P+  TY+ MI GY   G+L+
Sbjct: 228 GQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLE 287

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A+ +  +M   G+  D V+Y+ ++  Y K+GR  EA  V   M   G + ++  Y+ LL
Sbjct: 288 EAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILL 347

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GY  +G   +VR + + M  D +      ++ LI  Y+K G   +AM  F E +Q GL+
Sbjct: 348 HGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLR 407

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR----SATTEC 562
            DVV YS +I  LCK G VE AV   ++M  EG+ PN++++ S+I             E 
Sbjct: 408 PDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEEL 467

Query: 563 TVDDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIKV--------FGQLVAEK 612
             + + R +       N  +D +C +    V EA    + +I +        +  L+   
Sbjct: 468 AFEMINRGIHPDAIFMNTIMDNLCKEG--RVVEAQDFFDMVIHIGVKPDVVSYNTLIDGY 525

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              GK +   +Q          +M  + ++P+  T++++LN   +    EDA  L  E+ 
Sbjct: 526 CFVGKMDESIKQ--------LDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMF 577

Query: 673 LFDNQVYGVA-----HGLLMGYRDNIWVQALSLFDEVKLMDSST 711
             D +   +      HGL    R    V A  L+  +K++D  T
Sbjct: 578 RKDVKFCAITSNIMLHGLFQAGR---IVAARELY--MKMVDRGT 616



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 209/396 (52%), Gaps = 5/396 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L++     G  ++A   F   V++ ++ N    +   ++      G +   +++ + 
Sbjct: 308 YSLLIQYYCKIGRCAEARSVFDSMVRKGQKPN--STIYHILLHGYATKGALIDVRDLLDL 365

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            + +G      AF+ LI AY + G   +A++ F  M++  L+P++V+Y+ VI    K G 
Sbjct: 366 MIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTG- 424

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             +  V  F+ M+  G+ P+ I+F SL+  +CS G  W+    L  EM++RGI  D    
Sbjct: 425 RVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGE-WKKVEELAFEMINRGIHPDAIFM 483

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           NT++D +CK  ++  A +    +    + P+VV+Y+T+IDGY   G++D+++     M  
Sbjct: 484 NTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVS 543

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           +G+  D  +YN++L+ Y K GR E+AL + +EM    ++  A+T N +L G  + G+   
Sbjct: 544 IGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVA 603

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            R ++ +M        + TY+T++    +     EA+++F + +    + DV  +S +I+
Sbjct: 604 ARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVIN 663

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           AL K G ++ A SL   M   G  P+V+TY+ +I +
Sbjct: 664 ALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKS 699



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 232/487 (47%), Gaps = 44/487 (9%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V +++ +I  + + G   +A  +F+ M    L P++VTYN++ID  C    +D    V I
Sbjct: 200 VVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMD--KAVAI 257

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
              M   GV PD  T+N ++   CS G L EA R L  +M   G+  D+ TY+ L+   C
Sbjct: 258 LQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVR-LLKKMSGSGLQPDVVTYSLLIQYYC 316

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  +   A  +   M  K   PN   Y  ++ GYA  G L D  ++   M   GI  +  
Sbjct: 317 KIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHR 376

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           ++N ++  YAK G  ++A+    EM  +G+R D V+Y+ ++    K G+ ++    F QM
Sbjct: 377 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQM 436

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
            ++ +SPN++++++LI      G +K+  ++  E    G+  D +  + ++D LCK G V
Sbjct: 437 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 496

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKESANLDAM 583
             A    D +   G++P+VV+YN++ID +      + ++  ++R   +G + +S   +++
Sbjct: 497 VEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSL 556

Query: 584 CS--------QD---------DKDVQEAGRTDNQIIKVF---GQLVAEKAGQGKKENRCR 623
            +        +D          KDV+    T N ++      G++VA +    K  +R  
Sbjct: 557 LNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGT 616

Query: 624 Q--------------EILCI---LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
           Q              E  C+   L +F+ +   + + +V TFS ++NA  +    ++A  
Sbjct: 617 QLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKS 676

Query: 667 LLEELRL 673
           L   + L
Sbjct: 677 LFSAMVL 683



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 182/355 (51%), Gaps = 5/355 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I    + G VD A   F      G    V ++S +I    ++G  ++A+  FN M    
Sbjct: 381 LICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEG 440

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
           L PN++++ ++I   C  G  ++K V E+  +M+  G+ PD I  N+++  +C  G + E
Sbjct: 441 LSPNIISFTSLIHGLCSIG--EWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVE 498

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           A ++ F+ ++H G+  D+ +YNTL+D  C   +MD + + +  M +  + P+  TY++++
Sbjct: 499 A-QDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLL 557

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY K GR++DAL ++ EM    +    ++ N +L    + GR   A  +  +M   G +
Sbjct: 558 NGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQ 617

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
               TYN +LGG  +    DE  RMFE +++     ++ T+S +I+   K G   EA  +
Sbjct: 618 LRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSL 677

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           F      G   DV+ YS +I +  + GL+E + +L   M K G   +    N I+
Sbjct: 678 FSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIV 732



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 176/346 (50%), Gaps = 9/346 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I IL + G+V+ A   F   ++EG    + +F++LI      G  ++   +   M  
Sbjct: 414 STVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMIN 473

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLL-AVCSRG 312
             + P+ +  N ++D   K G     VVE    FD ++  GV+PD +++N+L+   C  G
Sbjct: 474 RGIHPDAIFMNTIMDNLCKEG----RVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVG 529

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            + E+ + L + MV  G+  D +TYN+LL+   K  +++ A  +  EM  K++    +T 
Sbjct: 530 KMDESIKQL-DRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITS 588

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + M+ G  +AGR+  A  ++ +M   G  L   +YNTVL    +    +EAL + +++ S
Sbjct: 589 NIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS 648

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
                D  T++ ++    K G+ DE + +F  M      P+++TYS +I  + + GL +E
Sbjct: 649 KEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEE 708

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           +  +F   ++ G  AD  + + ++  L + G V  A + L ++ ++
Sbjct: 709 SDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEK 754



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 186/436 (42%), Gaps = 79/436 (18%)

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR-------NLFNEMVHR 328
           G +  +  + +FD++L          FNS+L V +R     + R       +LFN MV  
Sbjct: 26  GSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRS 85

Query: 329 GID------------------------------------QDIFTYNTLLDAICKGAQMDL 352
           G++                                    Q++ T N L+  +C G + D 
Sbjct: 86  GVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNV-TLNQLIKGLCDGNRTDD 144

Query: 353 AFE-IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG---IGLDRVSYN 408
           A + +   MP    +P+V +Y+ +I G     +  +AL +   M   G      + VSYN
Sbjct: 145 AMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYN 204

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           TV+  + K G  ++A  +  EM   G+  D VTYN+L+ G  K    D+   + + M   
Sbjct: 205 TVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDK 264

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V P+  TY+ +I  Y   G  +EA+++ ++   +GL+ DVV YS LI   CK G    A
Sbjct: 265 GVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEA 324

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
            S+ D M ++G +PN   Y+ ++  +   AT    +D   RDL        LD M  +D 
Sbjct: 325 RSVFDSMVRKGQKPNSTIYHILLHGY---ATKGALID--VRDL--------LDLMI-RDG 370

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
              +          + F  L+   A  G  +          +  F +M +  ++P+VV++
Sbjct: 371 IPFEH---------RAFNILICAYAKHGAVDK--------AMTAFTEMRQNGLRPDVVSY 413

Query: 649 SAILNACSRCNSFEDA 664
           S +++   +    EDA
Sbjct: 414 STVIHILCKTGRVEDA 429



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 129/288 (44%), Gaps = 38/288 (13%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +T L+  L + GEW K ++  AF +       D     + ++  L + G+V  A++ F+ 
Sbjct: 448 FTSLIHGLCSIGEWKK-VEELAFEMINRGIHPD-AIFMNTIMDNLCKEGRVVEAQDFFDM 505

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            ++ G    V +++ LI  Y   G   E+I   + M    L+P+  TYN++++   K G 
Sbjct: 506 VIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNG- 564

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +  + ++ +M R  V+   IT N +L    + G   AAR L+ +MV RG    I TYN
Sbjct: 565 RVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYN 624

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNIS-------------------------------- 366
           T+L  +C+ + +D A  +  ++ +K                                   
Sbjct: 625 TVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLR 684

Query: 367 ---PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
              P+V+TYS MI  + + G L+++ N+F  M+  G   D    N ++
Sbjct: 685 GPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIV 732


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 235/488 (48%), Gaps = 44/488 (9%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID-ACGKGGVDF 280
           +G+   V  +S +IS   ++G   EA+ +   M    + P++ TY  ++D  C  G VD 
Sbjct: 4   KGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVD- 62

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
               E+F  M+  G   + + +N+L+    +    E A  L  EM  +G + D  TYNT+
Sbjct: 63  -EADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTI 121

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG- 399
           L  +C+  ++  A +    MP++  SP+VV Y+ ++D   K G++ +A  +F  M     
Sbjct: 122 LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADR 181

Query: 400 -IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            +  D ++YNT++  + ++ + +EA+ + K++ + G   D VTYN++L G  ++   DE 
Sbjct: 182 KVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 241

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             MF++M     +PN  TYS ++  + + G     ++++ E  +     DV+L +A+ID 
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDM 301

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
           LCK   V+ A  +L+EM+K G  P+VVTYN ++D   ++            D   +  S 
Sbjct: 302 LCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLV---------DKAHELFST 352

Query: 579 NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
            +D  C+ D                V   +V     +  K +  R        +F +M +
Sbjct: 353 MVDNGCAPD---------------IVSYSVVLNGLCKTNKVHDARV-------LFDRMIE 390

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA-----HGLLMGYRDNI 693
            K+ P+VVTF+ +++   +    ++A  LL+ +   +    GV      HGL    RD  
Sbjct: 391 RKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLC---RDKR 447

Query: 694 WVQALSLF 701
             +A+ LF
Sbjct: 448 TDEAVRLF 455



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 192/364 (52%), Gaps = 5/364 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +IS L + GKV  A  + E    +G    V  ++ ++    R+G   EA  +F+ M  
Sbjct: 14  STIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIE 73

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                N V YNA+I+   K   + +   ++ ++M   G +PD IT+N++L+   R G   
Sbjct: 74  RGCSANTVAYNALINGLCKDE-NIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVS 132

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA---FEIMAEMPAKNISPNVVTYS 373
            A+  F+ M  RG   D+  YN LLDA+ K  ++  A   F+ M +M  + ++P+++TY+
Sbjct: 133 EAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM-DMADRKVAPDLITYN 191

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+IDG+ +  + D+A+ +F ++   G   D V+YN++L   A+    +EA  + K+M  S
Sbjct: 192 TLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDS 251

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G   +  TY+ +L G+ + G       ++E+M     SP++L  + +ID+  K     +A
Sbjct: 252 GCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDA 311

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            ++  E  + G   DVV Y+ L+D LCK  LV+ A  L   M   G  P++V+Y+ +++ 
Sbjct: 312 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNG 371

Query: 554 FGRS 557
             ++
Sbjct: 372 LCKT 375



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 196/409 (47%), Gaps = 42/409 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S L R+GKV  AK  F++  + GY   V A++ L+ A  + G   EA  +F +M  
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178

Query: 257 YNLK--PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            + K  P+L+TYN +ID  C     D    +++F D++  G  PD +T+NS+L   +R  
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTD--EAMKLFKDVIAKGYMPDTVTYNSILLGLARKS 236

Query: 314 LWEAARNLFNEMVHRG-----------------------------------IDQDIFTYN 338
             + A  +F +MV  G                                      D+   N
Sbjct: 237 NMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCN 296

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            ++D +CK  ++D A +++ EM      P+VVTY+ ++DG  K   +D A  +FS M   
Sbjct: 297 AVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 356

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   D VSY+ VL+   K  +  +A ++   M    +  D VT+N L+ G  K GK DE 
Sbjct: 357 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 416

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
           + + + M    V P+ +T +TL+    +     EA+++F+   + G  ADV+ ++ ++  
Sbjct: 417 KDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAG 476

Query: 519 LCKNGLVESAVSLLDEMTKEG--IRPNVVTYNSIIDAFGRSATTECTVD 565
           LC+ G +  A+     M K      P+VVTY ++++A   +   +  VD
Sbjct: 477 LCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVD 525



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 197/408 (48%), Gaps = 11/408 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT ++  L   G+  +A + F   ++R    N      +A+I+ L +   ++ A  + E 
Sbjct: 48  YTIIVDRLCRAGKVDEADELFHKMIERGCSANTVA--YNALINGLCKDENIERAYKLLEE 105

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             ++GY      ++ ++S   R G   EA   F+SM      P++V YN ++DA  K G 
Sbjct: 106 MASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEG- 164

Query: 279 DFKHVVEIFD-----DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
               V E +      DM    V PD IT+N+L+    R    + A  LF +++ +G   D
Sbjct: 165 ---KVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPD 221

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             TYN++L  + + + MD A E+  +M     +PN  TYS ++ G+ + G +   L ++ 
Sbjct: 222 TVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYE 281

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           EM       D +  N V+ +  K  + ++A  V +EM   G   D VTYN LL G  K  
Sbjct: 282 EMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTN 341

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
             D+   +F  M  +  +P++++YS +++   K     +A  +F    +  L  DVV ++
Sbjct: 342 LVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFN 401

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            L+D LCK G ++ A  LLD M++  + P+ VT  +++    R   T+
Sbjct: 402 ILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTD 449



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 196/409 (47%), Gaps = 48/409 (11%)

Query: 290 MLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           M   G +PD +T++++++ +C  G + EA   +  EM  +G++ D+ TY  ++D +C+  
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALE-MVEEMTEKGVNPDVATYTIIVDRLCRAG 59

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++D A E+  +M  +  S N V Y+ +I+G  K   ++ A  +  EM   G   D ++YN
Sbjct: 60  KVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYN 119

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK-A 467
           T+LS   ++G+  EA      M S G   D V YN LL    K+GK  E   +F+ M  A
Sbjct: 120 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMA 179

Query: 468 D-CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           D  V+P+L+TY+TLID + +     EAM++F++    G   D V Y++++  L +   ++
Sbjct: 180 DRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMD 239

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE---------- 576
            A  +  +M   G  PN  TY+ ++       +  C V ++ R L   +E          
Sbjct: 240 EAEEMFKKMVDSGCAPNGATYSIVL-------SGHCRVGNMARCLELYEEMTEKRFSPDV 292

Query: 577 ---SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI----LCI 629
              +A +D +C    K V +A +   ++ K+           G   +     I    LC 
Sbjct: 293 LLCNAVIDMLCKA--KKVDDAHKVLEEMSKI-----------GAVPDVVTYNILLDGLCK 339

Query: 630 LGVFQKMHKL-------KIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             +  K H+L          P++V++S +LN   + N   DA +L + +
Sbjct: 340 TNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 388



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 175/340 (51%), Gaps = 5/340 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R   +D A+ +F+  ++ G       +S ++S + R G     + ++  M      P+
Sbjct: 232 LARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPD 291

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           ++  NAVID  C    VD  H  ++ ++M + G  PD +T+N LL    +  L + A  L
Sbjct: 292 VLLCNAVIDMLCKAKKVDDAH--KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHEL 349

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F+ MV  G   DI +Y+ +L+ +CK  ++  A  +   M  + + P+VVT++ ++DG  K
Sbjct: 350 FSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCK 409

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           AG+LD+A ++   M    +  D V+  T++    +  R +EA+ + + M   G   D + 
Sbjct: 410 AGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLP 469

Query: 442 YNALLGGYGKQGKYDEVRRMFEQM-KADC-VSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           +N +L G  ++GK  +    F+ M K+D   SP+++TY+TL++   + G   +A+  F++
Sbjct: 470 HNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQ 529

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
              +G   D V Y+ L++ L K G    A  L   M ++G
Sbjct: 530 MTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 569



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 171/353 (48%), Gaps = 7/353 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +L  L  +    +A + F   V      N  G   S ++S   R+G +     ++E 
Sbjct: 225 YNSILLGLARKSNMDEAEEMFKKMVDSGCAPN--GATYSIVLSGHCRVGNMARCLELYEE 282

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
              + +   V   +A+I    ++    +A  V   M +    P++VTYN ++D  C    
Sbjct: 283 MTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNL 342

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           VD  H  E+F  M+ NG  PD ++++ +L    +      AR LF+ M+ R +  D+ T+
Sbjct: 343 VDKAH--ELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTF 400

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L+D +CK  ++D A +++  M   N+ P+ VT +T++ G  +  R D+A+ +F  M  
Sbjct: 401 NILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVE 460

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG--IRKDAVTYNALLGGYGKQGKY 455
            G   D + +N VL+   + G+  +ALL  K M  S      D VTY  L+    + G+ 
Sbjct: 461 KGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRV 520

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           D+    F+QM     +P+ + Y+TL++   K G + +A ++ +  K+ G  +D
Sbjct: 521 DQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 5/146 (3%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G   + ++  L R  + D A  +F+  + +G    V   + +++   R G   +A+  F 
Sbjct: 432 GVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFK 491

Query: 253 SMKRYN--LKPNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC 309
           SM + +    P++VTY  +++A  + G VD    V+ F  M  +G  PD + +N+L+   
Sbjct: 492 SMVKSDGEFSPDVVTYTTLVNALIEAGRVD--QAVDYFQQMTGSGCAPDYVAYNTLMNGL 549

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIF 335
            + G    A  L   M  +G   D F
Sbjct: 550 RKQGRHIQADRLTQAMKEKGFLSDCF 575


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 192/391 (49%), Gaps = 40/391 (10%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +D A   +   L+ G    V  +S++I+A  ++    +A+ V  SM +  + PN  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N+++   C  G    K  +     M  +GV+PD +T+NSL+    + G    AR +F+ M
Sbjct: 273 NSIVHGYCSSG--QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 326 VHRGIDQDIFTYNTLLDAIC-KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
             RG+  +I TY TLL     KGA +++   ++  M    I PN   +S +I  YAK G+
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL------------------- 425
           +D A+ +FS+M+  G+  D V+Y TV+ I  K GR E+A+                    
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 426 ----------------VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
                           +  EM   GI  D + +N+++  + K+G+  E  ++F+ M    
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           V P+++TYSTLID Y   G   EA ++       G+K D V Y+ LI+  CK   +E A+
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            L  EM   G+ P+++TYN I+    ++  T
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRT 600



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 131/513 (25%), Positives = 247/513 (48%), Gaps = 44/513 (8%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V +++ +I+ + + G   +A   ++ M    + PN+VTY+++I A C    +D    +E+
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD--KAMEV 256

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
              M++NGV P+  T+NS++   CS G   EA      +M   G++ D+ TYN+L+D +C
Sbjct: 257 LTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAI-GFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  +   A ++   M  + + P + TY T++ GYA  G L +   +   M   GI  +  
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            ++ ++  YAK G+ ++A+LV  +M   G+  D VTY  ++G   K G+ ++  R FEQM
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             + +SP  + Y++LI        + +A ++  E    G+  D + ++++ID+ CK G V
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
             +  L D M + G++P+++TY+++ID +  +              GK  E+  L  + S
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLA--------------GKMDEATKL--LAS 539

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
                ++    T N +I  + ++              R E   +L  F++M    + P++
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKI-------------SRMEDALVL--FREMESSGVSPDI 584

Query: 646 VTFSAILNACSRCNSFEDASMLL----EELRLFDNQVYGVA-HGLLMGYRDNIWVQALSL 700
           +T++ IL    +      A  L     E     +   Y +  HGL    ++N+  +AL +
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC---KNNLTDEALRM 641

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           F  + L D    +  +N +   L   G+   A+
Sbjct: 642 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 176/320 (55%), Gaps = 1/320 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y FS LI AY + G   +A+ VF+ M++  L P+ VTY  VI    K G   +  +  F+
Sbjct: 375 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG-RVEDAMRYFE 433

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M+   + P  I +NSL+        W+ A+ L  EM+ RGI  D   +N+++D+ CK  
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++  + ++   M    + P+++TYST+IDGY  AG++D+A  + + M  +G+  D V+YN
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+++ Y K+ R E+AL++ +EMESSG+  D +TYN +L G  +  +    + ++  +   
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
                L TY+ ++    K  L  EA+++F+      L+ +   ++ +I AL K G  + A
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 529 VSLLDEMTKEGIRPNVVTYN 548
             L   ++  G+ P+V TY+
Sbjct: 674 KDLFAALSANGLVPDVRTYS 693



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 233/485 (48%), Gaps = 34/485 (7%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKRYNLKPNLVT 265
           G++DL        + +G+     AF+ L+          +A+  V   M +    PN+ +
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 266 YNAVIDACGKGGVD---FKHVVEIFDDMLRNG--VQPDRITFNSLLAVCSRGGLWEAARN 320
           YN ++    KG  D    +  +E+   M  +G    PD +++ +++    + G  + A  
Sbjct: 165 YNILL----KGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
            ++EM+ RGI  ++ TY++++ A+CK   MD A E++  M    + PN  TY++++ GY 
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
            +G+  +A+    +M   G+  D V+YN+++    K GR  EA  +   M   G++ +  
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY  LL GY  +G   E+  + + M  + + PN   +S LI  Y+K G   +AM +F + 
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGR- 556
           +Q GL  D V Y  +I  LCK+G VE A+   ++M  E + P  + YNS+I +   F + 
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 557 SATTECTVDDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIKV--------FG 606
               E  ++ ++R +       N  +D+ C +    V E+ +  + ++++        + 
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEG--RVIESEKLFDLMVRIGVKPDIITYS 518

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            L+      GK +   +        +   M  + +KP+ VT++ ++N   + +  EDA +
Sbjct: 519 TLIDGYCLAGKMDEATK--------LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570

Query: 667 LLEEL 671
           L  E+
Sbjct: 571 LFREM 575



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 182/342 (53%), Gaps = 3/342 (0%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD 279
           ++G    V  +++L+    ++G C EA  +F+SM +  LKP + TY  ++     KG + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
             H   + D M+RNG+ P+   F+ L+   ++ G  + A  +F++M  +G++ D  TY T
Sbjct: 357 EMH--GLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++  +CK  +++ A     +M  + +SP  + Y+++I       + D A  +  EM   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I LD + +N+++  + K GR  E+  +   M   G++ D +TY+ L+ GY   GK DE  
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++   M +  + P+ +TY+TLI+ Y K    ++A+ +FRE + +G+  D++ Y+ ++  L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +     +A  L   +T+ G +  + TYN I+    ++  T+
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 138/575 (24%), Positives = 260/575 (45%), Gaps = 61/575 (10%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY---NLKPNLVTYNA 268
           A+++F+  L  G G ++Y  +  ++   R      A+S +N M R     + PNL TY  
Sbjct: 38  ARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYGI 96

Query: 269 VIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           +I +C   G +D         ++++ G + D I F  LL  +C+     +A   +   M 
Sbjct: 97  LIGSCCCAGRLDLGFAA--LGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP--AKNISPNVVTYSTMIDGYAKAGR 384
             G   ++F+YN LL  +C   +   A E++  MP    +  P+VV+Y+T+I+G+ K G 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD A   + EM   GI  + V+Y+++++   K    ++A+ V   M  +G+  +  TYN+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++ GY   G+  E     ++M +D V P+++TY++L+D   K G   EA ++F    + G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           LK ++  Y  L+      G +     LLD M + GI PN   ++ +I A+ +       V
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG----KV 390

Query: 565 DDVERDLGKQKESA-NLDAMCSQDDKDVQ-EAGRTDNQIIKVFGQLVAEKAGQGK----- 617
           D       K ++   N D +       +  ++GR ++  ++ F Q++ E+   G      
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA-MRYFEQMIDERLSPGNIVYNS 449

Query: 618 ---------KENRCRQEILCILG----------------------------VFQKMHKLK 640
                    K ++ ++ IL +L                             +F  M ++ 
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQAL 698
           +KP+++T+S +++        ++A+ LL  +     +   V +  L+ GY + +    AL
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 699 SLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
            LF E++    S     YN +   L+   +   A+
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 183/358 (51%), Gaps = 1/358 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++  L + G+   A+ +F++    G    +  +  L+  Y   G   E   + + M R
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN   ++ +I A  K G      + +F  M + G+ PD +T+ +++ +  + G  E
Sbjct: 368 NGIHPNHYVFSILICAYAKQG-KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A   F +M+   +      YN+L+ ++C   + D A E++ EM  + I  + + ++++I
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D + K GR+ ++  +F  M  +G+  D ++Y+T++  Y   G+ +EA  +   M S G++
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTYN L+ GY K  + ++   +F +M++  VSP+++TY+ ++    +      A ++
Sbjct: 547 PDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +    ++G + ++  Y+ ++  LCKN L + A+ +   +    ++    T+N +I A 
Sbjct: 607 YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 664



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 204/489 (41%), Gaps = 84/489 (17%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ---DIF 335
           D +HV   FD++LR G        N  LA  +R     AA + +N M   G D+   ++ 
Sbjct: 37  DARHV---FDELLRRGRGASIYGLNCALADVARHS-PAAAVSRYNRMARAGADEVTPNLC 92

Query: 336 TYNTLLDAICKGAQMDLAFE------------------------------------IMAE 359
           TY  L+ + C   ++DL F                                     ++  
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG--IGLDRVSYNTVLSIYAKL 417
           M      PNV +Y+ ++ G     R  +AL +   M   G     D VSY TV++ + K 
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G  ++A     EM   GI  + VTY++++    K    D+   +   M  + V PN  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           ++++  Y   G  KEA+   ++    G++ DVV Y++L+D LCKNG    A  + D MTK
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
            G++P + TY +++  +   AT    V+              LD M           G  
Sbjct: 333 RGLKPEITTYGTLLQGY---ATKGALVE----------MHGLLDLMVRN--------GIH 371

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
            N    VF  L+   A QGK +    Q +L    VF KM +  + P+ VT+  ++    +
Sbjct: 372 PNHY--VFSILICAYAKQGKVD----QAML----VFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 658 CNSFEDASMLLEEL---RLF-DNQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTA 712
               EDA    E++   RL   N VY  + H L +  +   W +A  L  E+        
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK---WDKAKELILEMLDRGICLD 478

Query: 713 SAFYNALTD 721
           + F+N++ D
Sbjct: 479 TIFFNSIID 487



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 192/379 (50%), Gaps = 13/379 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           ++ L+     +G+  +A+    F+  R++  N        +I IL + G+V+ A   FE 
Sbjct: 377 FSILICAYAKQGKVDQAM--LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQ 434

Query: 219 ALNE--GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
            ++E    GN VY  ++LI +        +A  +   M    +  + + +N++ID+  K 
Sbjct: 435 MIDERLSPGNIVY--NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492

Query: 277 GVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G     V+E   +FD M+R GV+PD IT+++L+      G  + A  L   MV  G+  D
Sbjct: 493 G----RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             TYNTL++  CK ++M+ A  +  EM +  +SP+++TY+ ++ G  +  R   A  ++ 
Sbjct: 549 CVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            +   G  L+  +YN +L    K    +EAL + + +  + ++ +  T+N ++G   K G
Sbjct: 609 GITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVG 668

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           + DE + +F  + A+ + P++ TYS + +   + GL +E   +F   ++ G  A+  + +
Sbjct: 669 RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728

Query: 514 ALIDALCKNGLVESAVSLL 532
           +++  L + G +  A + L
Sbjct: 729 SIVRKLLQRGDITRAGTYL 747



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 145/346 (41%), Gaps = 77/346 (22%)

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA--FEIMAEMPAKNISPNVVTYS 373
           E AR++F+E++ RG    I+  N  L  + + +       +  MA   A  ++PN+ TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I     AGRLD           LG              +A LG       V K+    
Sbjct: 96  ILIGSCCCAGRLD-----------LG--------------FAALGN------VIKK---- 120

Query: 434 GIRKDAVTYNALLGGYGKQGK----YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           G R DA+ +  LL G     +     D V R   Q+   C+ PN+ +Y+ L+        
Sbjct: 121 GFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL--GCI-PNVFSYNILLKGLCDENR 177

Query: 490 YKEAMQIFREFKQAG--LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
            +EA+++ +     G     DVV Y+ +I+   K G ++ A     EM   GI PNVVTY
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237

Query: 548 NSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
           +SII A  ++                Q     ++ + S     V    RT N I+  +  
Sbjct: 238 SSIIAALCKA----------------QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
                +GQ K+           +G  +KMH   ++P+VVT++++++
Sbjct: 282 -----SGQPKEA----------IGFLKKMHSDGVEPDVVTYNSLMD 312


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 145/466 (31%), Positives = 224/466 (48%), Gaps = 35/466 (7%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I +LGR GK++ A  I +   +EG G  V  ++ LI A   +     A  VF  MK    
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH 324

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAA 318
           KP+ VTY  ++D       D   V + + +M ++G  PD +TF  L+ A+C  G   EA 
Sbjct: 325 KPDRVTYITLLDRFSDNR-DLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L + M  +GI  ++ TYNTL+  + +  ++D A E+   M +  + P   TY   ID 
Sbjct: 384 DTL-DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y K+G    AL  F +MK  GI  + V+ N  L   AK GR  EA  +   ++  G+  D
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           +VTYN ++  Y K G+ DE  ++  +M  +   P+++  ++LI+   K     EA ++F 
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
             K+  LK  VV Y+ L+  L KNG ++ A+ L + M ++G  PN +T+N++ D      
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD------ 616

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
              C   + E  L  +     +D  C  D         T N II  FG +   K GQ K 
Sbjct: 617 ---CLCKNDEVTLALKMLFKMMDMGCVPD-------VFTYNTII--FGLV---KNGQVK- 660

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
                 E +C    F +M KL + P+ VT   +L    + +  EDA
Sbjct: 661 ------EAMCF---FHQMKKL-VYPDFVTLCTLLPGVVKASLIEDA 696



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 179/354 (50%), Gaps = 24/354 (6%)

Query: 210  DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
            DL  +I   A   G  N V +FS  + A   +G C++  S+   + RY+ K N V+    
Sbjct: 718  DLIGSILAEA---GIDNAV-SFSERLVA---NGICRDGDSILVPIIRYSCKHNNVS---- 766

Query: 270  IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
                       + + E F   L  GVQP   T+N L+       + E A+++F ++   G
Sbjct: 767  ---------GARTLFEKFTKDL--GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815

Query: 330  IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
               D+ TYN LLDA  K  ++D  FE+  EM       N +T++ +I G  KAG +DDAL
Sbjct: 816  CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875

Query: 390  NMFSE-MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            +++ + M          +Y  ++   +K GR  EA  + + M   G R +   YN L+ G
Sbjct: 876  DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935

Query: 449  YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            +GK G+ D    +F++M  + V P+L TYS L+D     G   E +  F+E K++GL  D
Sbjct: 936  FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995

Query: 509  VVLYSALIDALCKNGLVESAVSLLDEM-TKEGIRPNVVTYNSIIDAFGRSATTE 561
            VV Y+ +I+ L K+  +E A+ L +EM T  GI P++ TYNS+I   G +   E
Sbjct: 996  VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 173/370 (46%), Gaps = 36/370 (9%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G+    Y+++ LI    +S +C EA+ V+  M     +P+L TY++++   GK   D   
Sbjct: 183 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR-DIDS 241

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           V+ +  +M   G++P+  TF   + V  R G    A  +   M   G   D+ TY  L+D
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301

Query: 343 AICKGAQMDLAFEIM-----------------------------------AEMPAKNISP 367
           A+C   ++D A E+                                    +EM      P
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           +VVT++ ++D   KAG   +A +    M+  GI  +  +YNT++    ++ R ++AL + 
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
             MES G++  A TY   +  YGK G        FE+MK   ++PN++  +  +   +K 
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G  +EA QIF   K  GL  D V Y+ ++    K G ++ A+ LL EM + G  P+V+  
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541

Query: 548 NSIIDAFGRS 557
           NS+I+   ++
Sbjct: 542 NSLINTLYKA 551



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 171/342 (50%), Gaps = 4/342 (1%)

Query: 212  AKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
            A+ +FE    + G    +  ++ LI     +   + A  VF  +K     P++ TYN ++
Sbjct: 768  ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827

Query: 271  DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE-MVHRG 329
            DA GK G     + E++ +M  +  + + IT N +++   + G  + A +L+ + M  R 
Sbjct: 828  DAYGKSG-KIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886

Query: 330  IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
                  TY  L+D + K  ++  A ++   M      PN   Y+ +I+G+ KAG  D A 
Sbjct: 887  FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946

Query: 390  NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
             +F  M   G+  D  +Y+ ++     +GR +E L   KE++ SG+  D V YN ++ G 
Sbjct: 947  ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006

Query: 450  GKQGKYDEVRRMFEQMKAD-CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            GK  + +E   +F +MK    ++P+L TY++LI      G+ +EA +I+ E ++AGL+ +
Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1066

Query: 509  VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            V  ++ALI     +G  E A ++   M   G  PN  TY  +
Sbjct: 1067 VFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 234/522 (44%), Gaps = 55/522 (10%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            M+    ++G++D A  +    +  G    V   ++LI+   ++    EA  +F  MK   
Sbjct: 509  MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568

Query: 259  LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
            LKP +VTYN ++   GK G   +  +E+F+ M++ G  P+ ITFN+L   +C    +  A
Sbjct: 569  LKPTVVTYNTLLAGLGKNG-KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627

Query: 318  ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
             + LF +M+  G   D+FTYNT++  + K  Q+  A     +M  K + P+ VT  T++ 
Sbjct: 628  LKMLF-KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLP 685

Query: 378  GYAKAGRLDDALNMFSEMKFLGIGLDRVS----YNTVLSIYAKLGRFEEALLVCKEMESS 433
            G  KA  ++DA  + +   FL    D+ +     + + SI A+ G  + A+   + + ++
Sbjct: 686  GVVKASLIEDAYKIIT--NFLYNCADQPANLFWEDLIGSILAEAG-IDNAVSFSERLVAN 742

Query: 434  GIRKDAVTYNALLGGYG-KQGKYDEVRRMFEQMKADC-VSPNLLTYSTLIDVYSKGGLYK 491
            GI +D  +    +  Y  K       R +FE+   D  V P L TY+ LI    +  + +
Sbjct: 743  GICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIE 802

Query: 492  EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             A  +F + K  G   DV  Y+ L+DA  K+G ++    L  EM+      N +T+N +I
Sbjct: 803  IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVI 862

Query: 552  DAFGRSATTECTVD---DV--ERDL----------------------GKQKESANLDAMC 584
                ++   +  +D   D+  +RD                        KQ     LD  C
Sbjct: 863  SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC 922

Query: 585  SQD-------DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG------ 631
              +            +AG  D     +F ++V E      K      + LC++G      
Sbjct: 923  RPNCAIYNILINGFGKAGEAD-AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981

Query: 632  -VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              F+++ +  + P+VV ++ I+N   + +  E+A +L  E++
Sbjct: 982  HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMK 1023



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 120/501 (23%), Positives = 210/501 (41%), Gaps = 82/501 (16%)

Query: 247 AISVFNSMK-RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           + S F S+    NL     T N +++A    G   + +  +FD M +  ++ D  T+ ++
Sbjct: 101 SFSYFKSVAGNLNLVHTTETCNYMLEALRVDG-KLEEMAYVFDLMQKRIIKRDTNTYLTI 159

Query: 306 LAVCS-RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
               S +GGL +A   L  +M   G   + ++YN L+  + K      A E+   M  + 
Sbjct: 160 FKSLSVKGGLKQAPYAL-RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG 218

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
             P++ TYS+++ G  K   +D  + +  EM+ LG+  +  ++   + +  + G+  EA 
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            + K M+  G   D VTY  L+       K D  + +FE+MK     P+ +TY TL+D +
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
           S         Q + E ++ G   DVV ++ L+DALCK G    A   LD M  +GI PN+
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398

Query: 545 VTYNSI-----------------------------------IDAFGRSATTECTVDDVER 569
            TYN++                                   ID +G+S  +   ++  E+
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458

Query: 570 DLGKQKESANLDAMCSQDDKDVQEAGR---------------------TDNQIIKVFGQL 608
              K K  A     C+     + +AGR                     T N ++K + ++
Sbjct: 459 --MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 516

Query: 609 ----VAEKAGQGKKENRCRQEILCI----------------LGVFQKMHKLKIKPNVVTF 648
                A K      EN C  +++ +                  +F +M ++K+KP VVT+
Sbjct: 517 GEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTY 576

Query: 649 SAILNACSRCNSFEDASMLLE 669
           + +L    +    ++A  L E
Sbjct: 577 NTLLAGLGKNGKIQEAIELFE 597



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 108/199 (54%), Gaps = 4/199 (2%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            +I  L + G++  AK +FE  L+ G       ++ LI+ +G++G    A ++F  M +  
Sbjct: 897  LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956

Query: 259  LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            ++P+L TY+ ++D  C  G VD    +  F ++  +G+ PD + +N ++    +    E 
Sbjct: 957  VRPDLKTYSVLVDCLCMVGRVD--EGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEE 1014

Query: 318  ARNLFNEM-VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LFNEM   RGI  D++TYN+L+  +     ++ A +I  E+    + PNV T++ +I
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074

Query: 377  DGYAKAGRLDDALNMFSEM 395
             GY+ +G+ + A  ++  M
Sbjct: 1075 RGYSLSGKPEHAYAVYQTM 1093



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 4/218 (1%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
            Y  L+  L   G   +A Q F   +    R N    + + +I+  G+ G+ D A  +F+ 
Sbjct: 894  YGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN--CAIYNILINGFGKAGEADAACALFKR 951

Query: 219  ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + EG    +  +S L+      G   E +  F  +K   L P++V YN +I+  GK   
Sbjct: 952  MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH- 1010

Query: 279  DFKHVVEIFDDM-LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              +  + +F++M    G+ PD  T+NSL+      G+ E A  ++NE+   G++ ++FT+
Sbjct: 1011 RLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1070

Query: 338  NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            N L+       + + A+ +   M     SPN  TY  +
Sbjct: 1071 NALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 188/372 (50%), Gaps = 13/372 (3%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L + GK++ A+N+F+  L+ G   +  A+++LI     +    +A  +F  M R  
Sbjct: 329 LIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 388

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             P+ VTYN +IDA  K G+  +   ++   M+ +G  PD +T+N+++    +    E A
Sbjct: 389 CPPSPVTYNVMIDASCKRGM-LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA 447

Query: 319 RNLFNEMVHRGIDQDIFTYNTLL---------DAICKGAQMDLAFEIMAEMPAKNISPNV 369
             LFNEM   G   +  ++NT++         D  C+  ++D AF ++  M      P+V
Sbjct: 448 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDV 507

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           VTYST+I G     R+DDA ++  +M         V+ NT++    K GR +EA  V   
Sbjct: 508 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 567

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M SSG   D VTYN L+ G+ + G+ +  R +   M A  ++PN++TY+ L+    K   
Sbjct: 568 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 627

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
             EA  +F + K +G   ++  Y+ALI   C  G V+  + L  EM   GI P+ V Y +
Sbjct: 628 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 687

Query: 550 IIDAF---GRSA 558
           +       GRSA
Sbjct: 688 LAAELCKSGRSA 699



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 221/494 (44%), Gaps = 50/494 (10%)

Query: 180 AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYG 239
           A  V RE R+       + ++      G+VD A+ +     +E       ++  ++    
Sbjct: 199 ALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLC 258

Query: 240 RSGYCQEAISVFNSMK------RYNLKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLR 292
           ++G  +EA+ +F   +        +  P+L  YN VI   C    +D    V++F+ M  
Sbjct: 259 KAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRID--EAVQMFEKMNE 316

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
             V PD  ++  L+   ++ G    ARNLF +++H G+      Y +L+  +C     D 
Sbjct: 317 RNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 376

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A E+ A+M  +   P+ VTY+ MID   K G L++A ++  +M   G   D V+YNTV+ 
Sbjct: 377 ARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 436

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ---------GKYDEVRRMFE 463
              K  R EEALL+  EME  G   +  ++N ++ G  +Q         GK DE  R+ +
Sbjct: 437 GLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLK 496

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M  D   P+++TYSTLI          +A  +  +  +   K  VV  + LI  LCK G
Sbjct: 497 RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAG 556

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
            ++ A  +LD M   G  P+VVTYN+++    R+  TE           + +E  +    
Sbjct: 557 RIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE-----------RARELLS---- 601

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
                 D+   G   N  +  +  LV+      +    C        GVF +M      P
Sbjct: 602 ------DMVARGLAPN--VVTYTALVSGLCKANRLPEAC--------GVFAQMKSSGCAP 645

Query: 644 NVVTFSA-ILNACS 656
           N+ T++A IL  CS
Sbjct: 646 NLFTYTALILGFCS 659



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 189/375 (50%), Gaps = 16/375 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI    + G ++ A ++ +  + +G+   V  ++ ++    +S   +EA+ +FN M+R
Sbjct: 397 NVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMER 456

Query: 257 YNLKPNLVTYNAVI----------DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL 306
               PN  ++N +I           AC +G +D      +   M  +G  PD +T+++L+
Sbjct: 457 LGCTPNRRSHNTIILGLCQQSKIDQACQRGKLD--EAFRLLKRMTDDGHVPDVVTYSTLI 514

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
           +        + AR+L  +MV R     + T NTL+  +CK  ++  A E++  M +   S
Sbjct: 515 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 574

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P+VVTY+T++ G+ +AG+ + A  + S+M   G+  + V+Y  ++S   K  R  EA  V
Sbjct: 575 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGV 634

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
             +M+SSG   +  TY AL+ G+   G+ D   ++F +M    +SP+ + Y TL     K
Sbjct: 635 FAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCK 694

Query: 487 GGLYKEAMQIFREFKQAGLKADV---VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            G    A++I RE +++ L+++     +Y   +D L + G +E A+  + +M + G  P 
Sbjct: 695 SGRSARALEILREGRES-LRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPA 753

Query: 544 VVTYNSIIDAFGRSA 558
                S++    +S 
Sbjct: 754 PERCASLVAGLCKSG 768



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 154/649 (23%), Positives = 266/649 (40%), Gaps = 112/649 (17%)

Query: 160 TFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETA 219
           +FL  EL  RG   +A Q        E          + ++  L +  +VD A  +  T 
Sbjct: 118 SFLAHELCLRGSMERAFQLL------EIMPVANSSAYNIVVVALCKAARVDDALELARTM 171

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGV 278
             +       +  +++     SG   EA+ V+   +R   +P LVT N +++  C +G V
Sbjct: 172 SEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRR---EPCLVTLNVLLEGFCSRGQV 228

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAAR------------------ 319
           D     E+   M      PD +++ ++L  +C  G + EA R                  
Sbjct: 229 DKAR--ELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPP 286

Query: 320 ----------------------NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
                                  +F +M  R +  D ++Y  L+D + K  +++ A  + 
Sbjct: 287 SLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLF 346

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
            ++    ++P+ V Y+++I G   A   DDA  +F++M   G     V+YN ++    K 
Sbjct: 347 QKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKR 406

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G  EEA  + K+M   G   D VTYN ++ G  K  + +E   +F +M+    +PN  ++
Sbjct: 407 GMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSH 466

Query: 478 STLI---------DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
           +T+I         D   + G   EA ++ +     G   DVV YS LI  LC    V+ A
Sbjct: 467 NTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 526

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-LDAMCSQD 587
             LL++M K   +P VVT N++I    ++              G+ KE+   LDAM S  
Sbjct: 527 RHLLEDMVKRQCKPTVVTQNTLIHGLCKA--------------GRIKEAREVLDAMVS-- 570

Query: 588 DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
                 +G++ + +   +  LV      G+ E R R+       +   M    + PNVVT
Sbjct: 571 ------SGQSPDVV--TYNTLVHGHCRAGQTE-RARE-------LLSDMVARGLAPNVVT 614

Query: 648 FSAILNACSRCNSFEDASMLLEELR-------LFDNQVYGVAHGLLMGYRDNIWVQ-ALS 699
           ++A+++   + N   +A  +  +++       LF          L++G+     V   L 
Sbjct: 615 YTALVSGLCKANRLPEACGVFAQMKSSGCAPNLF------TYTALILGFCSAGQVDGGLK 668

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGK---RRQVW 745
           LF E+     S     Y  L   L   G+   A  ++ EG+   R + W
Sbjct: 669 LFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAW 717



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 124/525 (23%), Positives = 217/525 (41%), Gaps = 88/525 (16%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           F+++I  +   G   EA+ +F+ M+  +  P    YN +ID+  K   + + V ++   M
Sbjct: 13  FTSVIQGWCNVGRTFEAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQ-ETEAVKKMVQVM 70

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT-------------- 336
           +  G  PD  TF ++L    + G  + A  + +EM  R I     T              
Sbjct: 71  VDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSM 130

Query: 337 -----------------YNTLLDAICKGAQMDLAFEIMAEMPAKNI-------------- 365
                            YN ++ A+CK A++D A E+   M  K I              
Sbjct: 131 ERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGL 190

Query: 366 ------------------SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
                              P +VT + +++G+   G++D A  +   M       D VSY
Sbjct: 191 MDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSY 250

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT------YNALLGGYGKQGKYDEVRRM 461
            TVL    K GR EEA+ +  + E       + +      YN ++ G  +  + DE  +M
Sbjct: 251 CTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQM 310

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           FE+M    VSP+  +Y  LID  +K G   +A  +F++   +G+    V Y++LI  LC 
Sbjct: 311 FEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCM 370

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL--GKQKESAN 579
               + A  L  +M + G  P+ VTYN +IDA  +    E   D +++ +  G   +   
Sbjct: 371 ANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 430

Query: 580 ----LDAMCSQDD--------KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC-RQEI 626
               +D +C             +++  G T N+  +    ++     Q K +  C R ++
Sbjct: 431 YNTVMDGLCKSSRVEEALLLFNEMERLGCTPNR--RSHNTIILGLCQQSKIDQACQRGKL 488

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                + ++M      P+VVT+S +++        +DA  LLE++
Sbjct: 489 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 533



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 88/419 (21%), Positives = 165/419 (39%), Gaps = 75/419 (17%)

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M  + I P  + ++++I G+   GR  +A+ +FS M+        V YN ++   +K   
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV-YNVLIDSLSKRQE 59

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            E    + + M   G   D+ T+  +L G  K GK DE   + ++M++  + P   T S 
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           L       G  + A Q+      A   A    Y+ ++ ALCK   V+ A+ L   M+++ 
Sbjct: 120 LAHELCLRGSMERAFQLLEIMPVANSSA----YNIVVVALCKAARVDDALELARTMSEKR 175

Query: 540 I--------------------------------RPNVVTYNSIIDAFGRSATTECTVDDV 567
           I                                 P +VT N +++ F       C+   V
Sbjct: 176 IPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGF-------CSRGQV 228

Query: 568 ERDLGKQKESANLDAMCSQDD-------KDVQEAGRTDNQIIKVFG-QLVAEKAGQGKKE 619
           ++   ++   A  D  C+ D+         + +AGR + + +++FG + +   +      
Sbjct: 229 DK--ARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVE-EAVRLFGDRELPSSSSSSSSP 285

Query: 620 NRCRQEILCILGV------------FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
              R   + ILG+            F+KM++  + P+  ++  +++  ++     DA  L
Sbjct: 286 PSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNL 345

Query: 668 LEELRLFDNQVYGVA-----HGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
            ++L         VA     HGL M    N +  A  LF ++       +   YN + D
Sbjct: 346 FQKLLHSGVTPSTVAYTSLIHGLCMA---NSFDDARELFADMNRRGCPPSPVTYNVMID 401


>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
          Length = 617

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 203/422 (48%), Gaps = 26/422 (6%)

Query: 140 VSLGDILKKFEFKLCGADDYTFLLRELGN-RGEWSKAIQCFAFAVKREERKNDQGKLASA 198
           + L  +L++ +F L     Y+ LL  L N R     A+        RE R      L S 
Sbjct: 175 LRLLSLLREHDF-LPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSD 233

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRY 257
           +IS   R    D A  +  +A   G      A +ALISA G +G   EA ++F       
Sbjct: 234 LISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAG 293

Query: 258 NLKPNLVTYNAVIDACGKGGV---DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
            +KP    YNA++    KG V     K+  ++ D+M + GV PD  T++ L+   +R G 
Sbjct: 294 EIKPRTRAYNALL----KGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGR 349

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           WE+AR L  EM   G+    + ++ +L           AF ++ EM A  + P+   Y+ 
Sbjct: 350 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNV 409

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           MID + K   L  A++ F++M+  GI  D V++NT++  + K GR + A  + +EM  S 
Sbjct: 410 MIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN 469

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
                 TYN ++   G+Q  ++ V  M  +MK   + PN++TY+TL+DVY + G YKEA+
Sbjct: 470 CPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAI 529

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
                 K  GLK    +Y AL++A  + GL                RP+V+TY +++ A 
Sbjct: 530 DCIEAMKADGLKPSPTMYHALVNAYAQRGL----------------RPDVITYTTLMKAL 573

Query: 555 GR 556
            R
Sbjct: 574 IR 575



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 194/425 (45%), Gaps = 53/425 (12%)

Query: 250 VFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC 309
           +   ++   L+P+   ++ +I A  +  +     +E+       G+ P      +L++  
Sbjct: 215 LLGDLRESRLEPDAPLFSDLISAFARAALP-DAALELLASAQAIGLTPRSNAVTALISAL 273

Query: 310 SRGGLWEAARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
              G    A  LF E    G I      YN LL    + A +  A +++ EM    ++P+
Sbjct: 274 GTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPD 333

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
             TYS ++D Y +AGR + A  +  EM+  G+      ++ +L+ +   G +++A  V +
Sbjct: 334 EATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLR 393

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
           EM++SG+R D   YN ++  +GK          F +M+ + + P+++T++TLID + KGG
Sbjct: 394 EMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGG 453

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
            +  A ++F E +++        Y+ +I+ L +    E   ++L EM ++G+ PN++TY 
Sbjct: 454 RHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYT 513

Query: 549 SIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD--NQIIKVFG 606
           +++D +GRS              G+ KE+            D  EA + D       ++ 
Sbjct: 514 TLVDVYGRS--------------GRYKEAI-----------DCIEAMKADGLKPSPTMYH 548

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            LV   A +G                        ++P+V+T++ ++ A  R   F+   +
Sbjct: 549 ALVNAYAQRG------------------------LRPDVITYTTLMKALIRVEQFDKVPV 584

Query: 667 LLEEL 671
           + EE+
Sbjct: 585 IYEEM 589



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/428 (21%), Positives = 187/428 (43%), Gaps = 69/428 (16%)

Query: 248 ISVFNSMKRYNLKPNLVTYNAVIDAC--GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           + + + ++ ++  P+L +Y+ ++ +    +   D   +  +  D+  + ++PD   F+ L
Sbjct: 175 LRLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDL 234

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-PAKN 364
           ++  +R  L +AA  L       G+         L+ A+    ++  A  +  E   A  
Sbjct: 235 ISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGE 294

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           I P    Y+ ++ GY +   L +A  +  EM   G+  D  +Y+ ++  Y + GR+E A 
Sbjct: 295 IKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
           ++ KEME+ G++  +  ++ +L G+  +G + +   +  +M+A  V P+   Y+ +ID +
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            K      AM  F + ++ G++ DVV ++ LIDA CK G  + A  L +EM +    P  
Sbjct: 415 GKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGT 474

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
            TYN +I+                  LG+Q+    ++AM S+    ++E G         
Sbjct: 475 TTYNIMINL-----------------LGEQEHWEGVEAMLSE----MKEQG--------- 504

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
                                               + PN++T++ +++   R   +++A
Sbjct: 505 ------------------------------------LVPNIITYTTLVDVYGRSGRYKEA 528

Query: 665 SMLLEELR 672
              +E ++
Sbjct: 529 IDCIEAMK 536



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 59/281 (20%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +LK+ E        Y F  +L    +RG+W KA     FAV RE + +            
Sbjct: 356 LLKEMEADGVKPSSYVFSRILAGFRDRGDWQKA-----FAVLREMQAS------------ 398

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
                               G     + ++ +I  +G+      A+  FN M+   ++P+
Sbjct: 399 --------------------GVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPD 438

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           +VT+N +IDA  KGG       E+F++M  +   P   T+N ++ +      WE    + 
Sbjct: 439 VVTWNTLIDAHCKGG-RHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAML 497

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA-------------------K 363
           +EM  +G+  +I TY TL+D   +  +   A + +  M A                   +
Sbjct: 498 SEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQR 557

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
            + P+V+TY+T++    +  + D    ++ EM   G   DR
Sbjct: 558 GLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDR 598


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 214/420 (50%), Gaps = 39/420 (9%)

Query: 179 FAFAVKREERK-NDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALI 235
           FAF+V  +  K   Q  +A+   +I  L   GK+    ++F+  + EG+   V  +  LI
Sbjct: 121 FAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLI 180

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG----------------GV- 278
           +   + G    AI +  SM++ N +P++V Y ++ID+  K                 G+ 
Sbjct: 181 NGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGIS 240

Query: 279 -----------------DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARN 320
                            ++KHV  + ++M+ + + P+ + F++++ A+C  G + EA  +
Sbjct: 241 PSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEA-HD 299

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           + + M+ RG++ ++ TYN L+D  C  ++MD A ++   M  K  +P+VV+YST+I+GY 
Sbjct: 300 VVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYC 359

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K  R++ A+ +F EM    +  + V+Y+T++     +GR ++A+ +  EM + G   D V
Sbjct: 360 KIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFV 419

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           +Y  LL    K  + DE   + + ++   + P++  Y+ +ID   + G  + A  +F   
Sbjct: 420 SYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNL 479

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
              GL  +V  Y+ +I+ LC+ GL+  A  L  EM ++G  PN  TYN I   F R+  T
Sbjct: 480 SSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNET 539



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 216/421 (51%), Gaps = 18/421 (4%)

Query: 142 LGDILKKFEFKLCGAD------DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL 195
           +G++L  F+ K+ G         Y  L+  L   G  S AI+     ++  E+ N Q  +
Sbjct: 154 IGEVLHLFD-KMIGEGFQPNVVTYGTLINGLCKVGSTSAAIR----LLRSMEQGNCQPDV 208

Query: 196 A--SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
              +++I  L +  +V  A N+F   +++G   +++ +++LI A       +   ++ N 
Sbjct: 209 VVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNE 268

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSR 311
           M    + PN+V ++ V+DA C +G V   H  ++ D M++ GV+P+ +T+N+L+   C R
Sbjct: 269 MVNSKIMPNVVIFSTVVDALCKEGKVMEAH--DVVDMMIKRGVEPNVVTYNALMDGHCLR 326

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
             + EA + +F+ MV +G   D+ +Y+TL++  CK  +++ A  +  EM  K + PN VT
Sbjct: 327 SEMDEAVK-VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVT 385

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           YST++ G    GRL DA+ +F EM   G   D VSY  +L    K  R +EA+ + K +E
Sbjct: 386 YSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE 445

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            S +  D   Y  ++ G  + G+ +  R +F  + +  + PN+ TY+ +I+   + GL  
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLA 505

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA ++F E K+ G   +   Y+ +     +N      + LL EM   G   +V T   ++
Sbjct: 506 EASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLV 565

Query: 552 D 552
           +
Sbjct: 566 E 566



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 181/367 (49%), Gaps = 1/367 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+    L ++  A ++    L  G+   +  F+ LI      G   E + +F+ M    
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +PN+VTY  +I+   K G      + +   M +   QPD + + S++    +      A
Sbjct: 169 FQPNVVTYGTLINGLCKVG-STSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 227

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            NLF+EM+H+GI   IFTYN+L+ A+C   +      ++ EM    I PNVV +ST++D 
Sbjct: 228 FNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDA 287

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K G++ +A ++   M   G+  + V+YN ++  +      +EA+ V   M   G   D
Sbjct: 288 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 347

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            V+Y+ L+ GY K  + ++   +FE+M    + PN +TYSTL+      G  ++A+ +F 
Sbjct: 348 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFH 407

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E    G   D V Y  L+D LCKN  ++ A++LL  +    + P++  Y  +ID   R+ 
Sbjct: 408 EMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAG 467

Query: 559 TTECTVD 565
             E   D
Sbjct: 468 ELEAARD 474



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 233/507 (45%), Gaps = 42/507 (8%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G    +Y  + LI+++        A SV   + +   +PN+ T+N +I   C +G +   
Sbjct: 98  GIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIG-- 155

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            V+ +FD M+  G QP+ +T+ +L+    + G   AA  L   M       D+  Y +++
Sbjct: 156 EVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSII 215

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           D++CK  Q+  AF + +EM  + ISP++ TY+++I              + +EM    I 
Sbjct: 216 DSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIM 275

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + V ++TV+    K G+  EA  V   M   G+  + VTYNAL+ G+  + + DE  ++
Sbjct: 276 PNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKV 335

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F+ M     +P++++YSTLI+ Y K    ++AM +F E  +  L  + V YS L+  LC 
Sbjct: 336 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 395

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
            G ++ A++L  EM   G  P+ V+Y  ++D   ++        D    L K  E +N+D
Sbjct: 396 VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRL-----DEAIALLKAIEGSNMD 450

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLK 640
                           D QI  +              +  CR  E+     +F  +    
Sbjct: 451 P---------------DIQIYTIV------------IDGMCRAGELEAARDLFSNLSSKG 483

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQAL 698
           + PNV T++ ++N   +     +AS L  E++       G  + L+  G+ R+N  ++ +
Sbjct: 484 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGI 543

Query: 699 SLFDEVKL----MDSSTASAFYNALTD 721
            L  E+       D ST++     L+D
Sbjct: 544 QLLQEMLARGFSADVSTSTVLVEMLSD 570



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 108/467 (23%), Positives = 211/467 (45%), Gaps = 35/467 (7%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F+ ML     P    F  LL   ++   +    +L ++M   GI  +I+T N L+++ C 
Sbjct: 56  FNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCH 115

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  AF ++A++      PN+ T++T+I G    G++ + L++F +M   G   + V+
Sbjct: 116 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVT 175

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T+++   K+G    A+ + + ME    + D V Y +++    K  +  +   +F +M 
Sbjct: 176 YGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMI 235

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              +SP++ TY++LI        +K    +  E   + +  +VV++S ++DALCK G V 
Sbjct: 236 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 295

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM-CS 585
            A  ++D M K G+ PNVVTYN+++D         C   +++  +         D M C 
Sbjct: 296 EAHDVVDMMIKRGVEPNVVTYNALMDG-------HCLRSEMDEAVKV------FDTMVCK 342

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
               DV       N   K+                   Q I   + +F++M + ++ PN 
Sbjct: 343 GFAPDVVSYSTLINGYCKI-------------------QRIEKAMYLFEEMCRKELIPNT 383

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDE 703
           VT+S +++        +DA  L  E+         V++ +L+ Y  ++    +A++L   
Sbjct: 384 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 443

Query: 704 VKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
           ++  +       Y  + D +   G+   A+ +      + +  NVW+
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWT 490



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 152/308 (49%), Gaps = 3/308 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V  FS ++ A  + G   EA  V + M +  ++PN+VTYNA++D  C +  +D    V++
Sbjct: 278 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMD--EAVKV 335

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           FD M+  G  PD +++++L+    +    E A  LF EM  + +  +  TY+TL+  +C 
Sbjct: 336 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 395

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A  +  EM  +   P+ V+Y  ++D   K  RLD+A+ +   ++   +  D   
Sbjct: 396 VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQI 455

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y  V+    + G  E A  +   + S G+  +  TY  ++ G  +QG   E  ++F +MK
Sbjct: 456 YTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 515

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
               SPN  TY+ +   + +       +Q+ +E    G  ADV   + L++ L  +GL +
Sbjct: 516 RKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQ 575

Query: 527 SAVSLLDE 534
           S   +L E
Sbjct: 576 SVKQILSE 583



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 171/345 (49%), Gaps = 5/345 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L N  EW          V  +   N    + S ++  L + GKV  A ++ + 
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPN--VVIFSTVVDALCKEGKVMEAHDVVDM 303

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +  G    V  ++AL+  +       EA+ VF++M      P++V+Y+ +I+   K   
Sbjct: 304 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQ- 362

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             +  + +F++M R  + P+ +T+++L+  +C  G L +A   LF+EMV RG   D  +Y
Sbjct: 363 RIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIA-LFHEMVTRGQIPDFVSY 421

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             LLD +CK  ++D A  ++  +   N+ P++  Y+ +IDG  +AG L+ A ++FS +  
Sbjct: 422 CILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS 481

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  +  +Y  +++   + G   EA  +  EM+  G   +  TYN +  G+ +  +   
Sbjct: 482 KGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLR 541

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             ++ ++M A   S ++ T + L+++ S  GL +   QI  EF Q
Sbjct: 542 GIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 179/393 (45%), Gaps = 34/393 (8%)

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
           H         +NTL DA+        +F  M  M      P++  ++ ++    K     
Sbjct: 36  HNTFHSKSLNFNTLDDALS-------SFNRMLHMHPP---PSIADFTKLLISITKMKHYS 85

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
             L++  +M   GI  +  + N +++ +  L R   A  V  ++   G + +  T+N L+
Sbjct: 86  TVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLI 145

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G   +GK  EV  +F++M  +   PN++TY TLI+   K G    A+++ R  +Q   +
Sbjct: 146 RGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQ 205

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            DVV+Y+++ID+LCK+  V  A +L  EM  +GI P++ TYNS+I A       +  V  
Sbjct: 206 PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK-HVTA 264

Query: 567 VERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQIIK--VFGQLVAEKAGQGK 617
           +  ++   K   N       +DA+C +    V EA    + +IK  V   +V   A    
Sbjct: 265 LLNEMVNSKIMPNVVIFSTVVDALCKEG--KVMEAHDVVDMMIKRGVEPNVVTYNA---L 319

Query: 618 KENRC-RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL---RL 673
            +  C R E+   + VF  M      P+VV++S ++N   +    E A  L EE+    L
Sbjct: 320 MDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKEL 379

Query: 674 FDNQVY--GVAHGLLMGYRDNIWVQALSLFDEV 704
             N V    + HGL    R      A++LF E+
Sbjct: 380 IPNTVTYSTLMHGLCHVGR---LQDAIALFHEM 409


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 186/355 (52%), Gaps = 3/355 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G+ D    ++   +  G    V  +  LI    R G   +A  +F+ M    + P 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +V Y  +I   CG+  +       +F  M  +G+ P+  T+N+++    +    + A  L
Sbjct: 228 VVIYTILIRGLCGESRIS--EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           + EM+  G+  ++ T+  L+D +CK  +M  A + + +M +  + PN+  Y+ +IDGY K
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           AG L +AL++ SE++   I  D  +Y+ ++     + R EEA  + +EM+  G   +AVT
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN L+ GY K+G  ++   +  QM    + PN++T+STLID Y K G  + AM ++ E  
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             GL  DVV Y+ALID   K+G  + A  L  EM + G+ PNV T + +ID   +
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 173/328 (52%), Gaps = 1/328 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G    A  +F+  + +    TV  ++ LI          EA S+F +M+   + PNL 
Sbjct: 205 RQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLY 264

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TYN ++D   K     K  +E++ +ML +G+ P+ +TF  L+    +     +AR    +
Sbjct: 265 TYNTMMDGYCKIA-HVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLID 323

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G+  +IF YN L+D  CK   +  A  + +E+    I P+V TYS +I G     R
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +++A  +  EMK  G   + V+YNT++  Y K G  E+A+ VC +M   GI  + +T++ 
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ GY K GK +    ++ +M    + P+++ Y+ LID + K G  KEA ++ +E ++AG
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLL 532
           L  +V   S LID LCK+G +  A+ L 
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 212/485 (43%), Gaps = 40/485 (8%)

Query: 208 KVDLAKN--IFETALNEGYGNTVYA-----FSALISAYGRSGYCQEAISVFNSMKRY--- 257
           + DLAKN  ++   ++   G  +YA        LI     S   +   SVFN + R    
Sbjct: 63  RADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNVLSRLESS 122

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
              PN+  +  +I A  + G+    V E      +  V P     N +L    + G ++ 
Sbjct: 123 KFTPNV--FGVLIIAFSEMGL----VEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDT 176

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
              ++ +MV RG   ++ TY TL+D  C+      AF +  EM  K I P VV Y+ +I 
Sbjct: 177 MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR 236

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G     R+ +A +MF  M+  G+  +  +YNT++  Y K+   ++AL + +EM   G+  
Sbjct: 237 GLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLP 296

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + VT+  L+ G  K  +    R+    M +  V PN+  Y+ LID Y K G   EA+ + 
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E ++  +  DV  YS LI  LC    +E A  LL EM K+G  PN VTYN++ID + + 
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416

Query: 558 ATTECTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
              E  ++   +   K  E      S  +D  C     +      T+  I  +   +VA 
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476

Query: 612 KA--------GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
            A        G  K+  R  +E          M +  + PNV T S +++   +     D
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKE----------MQEAGLHPNVFTLSCLIDGLCKDGRISD 526

Query: 664 ASMLL 668
           A  L 
Sbjct: 527 AIKLF 531



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 15/273 (5%)

Query: 283 VVEIFDDMLR-NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
           V+  F  +LR N    D  +    L  C+        + +   +++ G +  IF   +L+
Sbjct: 614 VLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLI 673

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
                   +  A  +  E+P+KN+    ++++++I  Y    R + AL +F +M+   + 
Sbjct: 674 SMYSATGNVADAHNMFDEIPSKNL----ISWTSVISAYVDNQRPNKALQLFRQMQMDDVQ 729

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D V+    LS  A LG  +    +   +   G+  D    N+L+  Y K G+    RR 
Sbjct: 730 PDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRF 789

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ-AGLKADVVLYSALIDALC 520
                   V PN +T+  ++   S  GL +E  Q FR  K+   L+  +  +  ++D LC
Sbjct: 790 ------SLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLC 843

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           + GL+  A   + +M    +RPN V + +++ A
Sbjct: 844 RAGLLTEAYEFILKMP---VRPNAVVWRTLLGA 873



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 136/300 (45%), Gaps = 26/300 (8%)

Query: 173 SKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFS 232
           SK +  F   +++     D   L  A+ +   +   V+  K +    +N G+   ++  +
Sbjct: 612 SKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVE-GKQMHALVINFGFEPIIFLQT 670

Query: 233 ALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH---VVEIFDD 289
           +LIS Y  +G   +A ++F+ +       NL+++ +VI A     VD +     +++F  
Sbjct: 671 SLISMYSATGNVADAHNMFDEIP----SKNLISWTSVISA----YVDNQRPNKALQLFRQ 722

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M  + VQPD +T    L+ C+  G  +    +   + HRG+D D+   N+L++   K  +
Sbjct: 723 MQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGE 782

Query: 350 MDLA--FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS- 406
           +  A  F +        + PN VT+  ++   + AG +++    F  MK       R+S 
Sbjct: 783 IGTARRFSL--------VLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISH 834

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +  ++ +  + G   EA     +M    +R +AV +  LLG    QG +D+   +  Q+K
Sbjct: 835 FGCMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLLGACSLQGMWDKKMLVRNQIK 891



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 100/495 (20%), Positives = 194/495 (39%), Gaps = 96/495 (19%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    + GK++ A  ++   + +G    V A++ALI  + + G  +EA  +   M+ 
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFN----SLLAVCSRG 312
             L PN+ T + +ID   K G      +++F  + + G        N    SL  +CS  
Sbjct: 502 AGLHPNVFTLSCLIDGLCKDG-RISDAIKLF--LAKTGTDTTGSKTNELDRSLYQMCS-- 556

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP----------- 361
                A +LF     RGI +       +        Q         + P           
Sbjct: 557 ----LALSLF-----RGISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQ 607

Query: 362 AKNISPNVVTYSTM-------IDGYA-----KAGRLDDALNMFSEMKFLGI--GLDRVSY 407
           + N S  ++ +  +       ID ++     KA  L  +L    +M  L I  G + + +
Sbjct: 608 SSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIF 667

Query: 408 --NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
              +++S+Y+  G   +A  +  E+ S    K+ +++ +++  Y    + ++  ++F QM
Sbjct: 668 LQTSLISMYSATGNVADAHNMFDEIPS----KNLISWTSVISAYVDNQRPNKALQLFRQM 723

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           + D V P+++T +  +   +  G       I    +  GL  D+ L ++LI+   K G +
Sbjct: 724 QMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEI 783

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
            +A           + PN VT+  ++ A   +      V++ ++     KE  +L    S
Sbjct: 784 GTARRF------SLVLPNDVTFMGVLMACSHAG----LVEEGKQHFRSMKEDYSLRPRIS 833

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH----KLKI 641
                              FG               C  ++LC  G+  + +    K+ +
Sbjct: 834 H------------------FG---------------CMVDLLCRAGLLTEAYEFILKMPV 860

Query: 642 KPNVVTFSAILNACS 656
           +PN V +  +L ACS
Sbjct: 861 RPNAVVWRTLLGACS 875



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/242 (19%), Positives = 100/242 (41%), Gaps = 43/242 (17%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G +P      SL+++ S  G    A N+F+E+  +    ++ ++ +++ A     + + A
Sbjct: 661 GFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKA 716

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
            ++  +M   ++ P++VT +  +   A  G LD    + + ++  G+  D    N+++++
Sbjct: 717 LQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINM 776

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD----- 468
           Y+K G    A         S +  + VT+  +L      G  +E ++ F  MK D     
Sbjct: 777 YSKCGEIGTA------RRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRP 830

Query: 469 ------------C----------------VSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
                       C                V PN + + TL+   S  G++ + M +  + 
Sbjct: 831 RISHFGCMVDLLCRAGLLTEAYEFILKMPVRPNAVVWRTLLGACSLQGMWDKKMLVRNQI 890

Query: 501 KQ 502
           KQ
Sbjct: 891 KQ 892



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/135 (22%), Positives = 67/135 (49%), Gaps = 11/135 (8%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L +++I++  + G++  A+       N+        F  ++ A   +G  +E    F SM
Sbjct: 769 LNNSLINMYSKCGEIGTARRFSLVLPND------VTFMGVLMACSHAGLVEEGKQHFRSM 822

Query: 255 KR-YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           K  Y+L+P +  +  ++D   + G+    + E ++ +L+  V+P+ + + +LL  CS  G
Sbjct: 823 KEDYSLRPRISHFGCMVDLLCRAGL----LTEAYEFILKMPVRPNAVVWRTLLGACSLQG 878

Query: 314 LWEAARNLFNEMVHR 328
           +W+    + N++  R
Sbjct: 879 MWDKKMLVRNQIKQR 893


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 209/413 (50%), Gaps = 21/413 (5%)

Query: 163 LRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE 222
           LR L  RG+  +A++    ++   E     G  A A+I  L   G+   A+ +      +
Sbjct: 66  LRGLVRRGDLEEALR-LVESMSGLEPSAAPGPCA-ALIKKLCASGRTAEARRVLAACEPD 123

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
                V A++A+++ Y  +G    A  +   M    ++P+  TYN +I   CG+G     
Sbjct: 124 -----VMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNA 175

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
            VV   DDMLR G  PD +T+  LL A C R G ++ A  L +EM  +G   DI TYN +
Sbjct: 176 LVV--LDDMLRRGCVPDVVTYTILLEATCKRSG-YKQAMKLLDEMRAKGCAPDIITYNVV 232

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           ++ IC+  ++D A E +  +P+    PN V+Y+ ++ G   A R +DA  + +EM   G 
Sbjct: 233 VNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGY 292

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             + V++N ++S   + G  E A+ V  ++   G   ++++YN +L  + KQ K D    
Sbjct: 293 PPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 352

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
             E M +    P++++Y+TL+    +GG    A+++  + K  G    ++ Y+ +ID L 
Sbjct: 353 FVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLT 412

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE------CTVDDV 567
           K G  + A+ LL+EM  +G++P+++TY++I     R    E      C V D+
Sbjct: 413 KAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDM 465



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 181/355 (50%), Gaps = 6/355 (1%)

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY-GRSGYCQEAISVFNSMKRYNLK 260
           + GR G+   A  + +  L  G    V  ++ L+ A   RSGY ++A+ + + M+     
Sbjct: 166 LCGR-GRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGY-KQAMKLLDEMRAKGCA 223

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           P+++TYN V++  C +G VD    +E    +  +G +P+ +++N +L        WE A 
Sbjct: 224 PDIITYNVVVNGICQEGRVD--DAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAE 281

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            L  EM  +G   ++ T+N L+  +C+   ++ A E++ ++P    +PN ++Y+ ++  +
Sbjct: 282 KLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAF 341

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K  ++D A+     M   G   D VSYNT+L+   + G  + A+ +  +++  G     
Sbjct: 342 CKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVL 401

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           ++YN ++ G  K GK  E   +  +M    + P+++TYST+     +    +EA++ F +
Sbjct: 402 ISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCK 461

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +  G++ + VLY+A++  LCK     +A+ L   M   G  PN  TY  +I+  
Sbjct: 462 VQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGL 516



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 206/429 (48%), Gaps = 45/429 (10%)

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDM 290
           +ALI     SG   EA  V  +      +P+++ YNA++   C  G +D      +  DM
Sbjct: 98  AALIKKLCASGRTAEARRVLAA-----CEPDVMAYNAMVAGYCVTGQLDAAR--RLVADM 150

Query: 291 LRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
               ++PD  T+N+L+  +C RG    A   + ++M+ RG   D+ TY  LL+A CK + 
Sbjct: 151 ---PMEPDSYTYNTLIRGLCGRGRTGNALV-VLDDMLRRGCVPDVVTYTILLEATCKRSG 206

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              A +++ EM AK  +P+++TY+ +++G  + GR+DDA+     +   G   + VSYN 
Sbjct: 207 YKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNI 266

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           VL       R+E+A  +  EM   G   + VT+N L+    ++G  +    + +Q+    
Sbjct: 267 VLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYG 326

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            +PN L+Y+ ++  + K      AM         G   D+V Y+ L+ ALC+ G V++AV
Sbjct: 327 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAV 386

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            LL ++  +G  P +++YN++ID   ++              GK KE+  L+ +     K
Sbjct: 387 ELLHQLKDKGCTPVLISYNTVIDGLTKA--------------GKTKEA--LELLNEMVTK 430

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
            +Q    T + I                +E+R  + I      F K+  + I+PN V ++
Sbjct: 431 GLQPDIITYSTISSGLC-----------REDRIEEAI----RAFCKVQDMGIRPNTVLYN 475

Query: 650 AI-LNACSR 657
           AI L  C R
Sbjct: 476 AILLGLCKR 484



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 166/314 (52%), Gaps = 3/314 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+VD A    ++  + G      +++ ++     +   ++A  +   M +    PN+VT+
Sbjct: 240 GRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTF 299

Query: 267 NAVID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +I   C +G V+    +E+ D + + G  P+ +++N +L    +    + A      M
Sbjct: 300 NMLISFLCRRGLVE--PAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 357

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V RG   DI +YNTLL A+C+G ++D A E++ ++  K  +P +++Y+T+IDG  KAG+ 
Sbjct: 358 VSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 417

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            +AL + +EM   G+  D ++Y+T+ S   +  R EEA+    +++  GIR + V YNA+
Sbjct: 418 KEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAI 477

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           L G  K+ +      +F  M ++   PN  TY+ LI+  +  GL KEA ++  E    G+
Sbjct: 478 LLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGV 537

Query: 506 KADVVLYSALIDAL 519
            +  ++  A I  L
Sbjct: 538 VSKGLINKAAIRLL 551



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 163/329 (49%), Gaps = 1/329 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + +    +G    +  ++ +++   + G   +AI    S+  +  +PN V+YN V+ 
Sbjct: 210 AMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLK 269

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
                   ++   ++  +M + G  P+ +TFN L++   R GL E A  + +++   G  
Sbjct: 270 GLCTAE-RWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCT 328

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            +  +YN +L A CK  +MD A   +  M ++   P++V+Y+T++    + G +D A+ +
Sbjct: 329 PNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVEL 388

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
             ++K  G     +SYNTV+    K G+ +EAL +  EM + G++ D +TY+ +  G  +
Sbjct: 389 LHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCR 448

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           + + +E  R F +++   + PN + Y+ ++    K      A+ +F      G   +   
Sbjct: 449 EDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNEST 508

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGI 540
           Y+ LI+ L   GLV+ A  LL E+   G+
Sbjct: 509 YTILIEGLTYEGLVKEARELLGELCSRGV 537



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 177/369 (47%), Gaps = 34/369 (9%)

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +PD + +N+++A     G  +AAR L  +M    ++ D +TYNTL+  +C   +   A  
Sbjct: 121 EPDVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRTGNALV 177

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++ +M  +   P+VVTY+ +++   K      A+ +  EM+  G   D ++YN V++   
Sbjct: 178 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGIC 237

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           + GR ++A+   K + S G   + V+YN +L G     ++++  ++  +M      PN++
Sbjct: 238 QEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVV 297

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           T++ LI    + GL + AM++  +  + G   + + Y+ ++ A CK   ++ A++ ++ M
Sbjct: 298 TFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 357

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
              G  P++V+YN+++ A  R    +  V+ + +                  DK      
Sbjct: 358 VSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ----------------LKDKGCTPVL 401

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
            + N +I         KAG+ K+           L +  +M    ++P+++T+S I +  
Sbjct: 402 ISYNTVIDGL-----TKAGKTKEA----------LELLNEMVTKGLQPDIITYSTISSGL 446

Query: 656 SRCNSFEDA 664
            R +  E+A
Sbjct: 447 CREDRIEEA 455



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 125/546 (22%), Positives = 229/546 (41%), Gaps = 67/546 (12%)

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
           N V    ++ + L  +  RG L EA R L   M              L+  +C   +   
Sbjct: 54  NAVPHRAVSNDRLRGLVRRGDLEEALR-LVESMSGLEPSAAPGPCAALIKKLCASGRTAE 112

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A  ++A        P+V+ Y+ M+ GY   G+LD A  + ++M    +  D  +YNT++ 
Sbjct: 113 ARRVLAA-----CEPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIR 164

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
                GR   AL+V  +M   G   D VTY  LL    K+  Y +  ++ ++M+A   +P
Sbjct: 165 GLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAP 224

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           +++TY+ +++   + G   +A++  +     G + + V Y+ ++  LC     E A  L+
Sbjct: 225 DIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLM 284

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCS 585
            EM+++G  PNVVT+N +I    R    E  ++ +++ + K   + N       L A C 
Sbjct: 285 AEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQ-IPKYGCTPNSLSYNPILHAFCK 343

Query: 586 QDDKDVQEA------GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
           Q   D   A       R     I  +  L+      G+ +              + +H+L
Sbjct: 344 QKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVD-----------AAVELLHQL 392

Query: 640 KIK---PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIW 694
           K K   P +++++ +++  ++    ++A  LL E+     Q   + +  +     R++  
Sbjct: 393 KDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRI 452

Query: 695 VQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
            +A+  F +V+ M     +  YNA+   L                KRR+      + + +
Sbjct: 453 EEAIRAFCKVQDMGIRPNTVLYNAILLGLC---------------KRRE------THNAI 491

Query: 755 DLHL-MSSGAARAMVHAWLLNIHSIVFEG--HELPKLLSILTGWGKHSKVVGDGALRRAV 811
           DL + M S         + + I  + +EG   E  +LL  L   G    VV  G + +A 
Sbjct: 492 DLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRG----VVSKGLINKAA 547

Query: 812 EVLLTG 817
             LL G
Sbjct: 548 IRLLDG 553



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 113/237 (47%), Gaps = 1/237 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +IS L R G V+ A  + +     G      +++ ++ A+ +      A++    M    
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             P++V+YN ++ A  +GG +    VE+   +   G  P  I++N+++   ++ G  + A
Sbjct: 362 CYPDIVSYNTLLTALCRGG-EVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEA 420

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L NEMV +G+  DI TY+T+   +C+  +++ A     ++    I PN V Y+ ++ G
Sbjct: 421 LELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLG 480

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
             K     +A+++F  M   G   +  +Y  ++      G  +EA  +  E+ S G+
Sbjct: 481 LCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGV 537



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 86/171 (50%), Gaps = 5/171 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +++ L R G+VD A  +     ++G    + +++ +I    ++G  +EA+ + N M  
Sbjct: 370 NTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVT 429

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS-LLAVCSRGGL 314
             L+P+++TY+ +    C +  ++    +  F  +   G++P+ + +N+ LL +C R   
Sbjct: 430 KGLQPDIITYSTISSGLCREDRIE--EAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRET 487

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
             A  +LF  M+  G   +  TY  L++ +     +  A E++ E+ ++ +
Sbjct: 488 HNAI-DLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGV 537


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 176/329 (53%), Gaps = 7/329 (2%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKR--YNLKPNLVTYNAVIDA-CGKGGVDFKHVV 284
           V   + ++    +SG  QEA++         +   PN VTYN +IDA C  G +   +  
Sbjct: 209 VVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAY-- 266

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE--MVHRGIDQDIFTYNTLLD 342
           E+ + M   GV  + +T N+++    R G   AA   F E   V      +  TY+TL+ 
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVG 326

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A+     + +A E+  E  ++  SP+ + Y TMI G  +AGRL+DA +M S MK  G  L
Sbjct: 327 ALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKL 386

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D  +YN +++ + +  R  EA  + +EM+  GIR D  TYN LL G  K G +  V  + 
Sbjct: 387 DTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELL 446

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +M  D   P+++T+ TL+  Y K G   EA++I R   ++G+  + V+Y+ LID LCK 
Sbjct: 447 GKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKR 506

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           G V+ A+ L DEM ++ +  NV T+N+++
Sbjct: 507 GDVDLAIELFDEMKEKSVPANVTTFNALL 535



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 183/379 (48%), Gaps = 13/379 (3%)

Query: 198 AMISILGRLGKV-DLAKNIFETALNEGYGNT---VYAFSALISAYGRSGYCQEAISVFNS 253
           A  SIL  L +V D+       AL +G  +    V  +  L++   ++G   +A+ V + 
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDG 197

Query: 254 MKRYNL--KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLR-NGVQPDRITFNSLLAVCS 310
           M R +L  +P++VT N V+D   K G   + +  +   M   +G  P+ +T+N L+    
Sbjct: 198 MSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC 257

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP--- 367
           R G    A  L  +M + G+ Q+I T NT++  +C+  +   A E   E   + + P   
Sbjct: 258 RVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGK 315

Query: 368 -NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
            N VTYST++        +  A+ +F E    G   D + Y T++S   + GR E+A  +
Sbjct: 316 GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSM 375

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
              M+ +G + D   YN L+ G+ ++ +  E   + ++MK   + P++ TY+TL+    K
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCK 435

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G +    ++  +    G +  V+ +  L+   CK G ++ A+ +L  M + GI PN V 
Sbjct: 436 AGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVI 495

Query: 547 YNSIIDAFGRSATTECTVD 565
           YN++ID   +    +  ++
Sbjct: 496 YNTLIDFLCKRGDVDLAIE 514



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 155/325 (47%), Gaps = 3/325 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    R+G + +A  + E   NEG    +   + ++    R+G    A+  F   + 
Sbjct: 250 NCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRT 309

Query: 257 Y--NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
                K N VTY+ ++ A      +    +E+F + +  G  PD I + ++++  ++ G 
Sbjct: 310 VWPEGKGNAVTYSTLVGALLHTN-NVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGR 368

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E A ++ + M   G   D   YN L+   C+  ++  A+E++ EM    I P+V TY+T
Sbjct: 369 LEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNT 428

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++ G  KAG       +  +M   G     +++ T++  Y K+G+ +EAL + + M+ SG
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I  + V YN L+    K+G  D    +F++MK   V  N+ T++ L+       + ++A 
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAF 548

Query: 495 QIFREFKQAGLKADVVLYSALIDAL 519
           ++  + ++     D V    L++ L
Sbjct: 549 ELMDQMREERCFPDYVTVDVLMEWL 573



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 193/433 (44%), Gaps = 44/433 (10%)

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPA-KNISPNVVTYSTMIDGYAKAGRLDDALNM 391
           D+F +N++L A+ +   +     I A M    ++ P+VVTY  +++G  KAGR+ DAL +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 392 FSEM--KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS--GIRKDAVTYNALLG 447
              M  + L I  D V+ NTV+    K GR +EAL   ++  SS  G   + VTYN L+ 
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL-- 505
            + + G       + E+M+ + V  N++T +T++    + G    A++ FRE +      
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           K + V YS L+ AL     V  A+ L  E   EG  P+ + Y ++I              
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGL----------- 363

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQEAG-RTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                     ++  L+  CS     ++EAG + D    K +  L+A           CR+
Sbjct: 364 ---------TQAGRLEDACSMASS-MKEAGFKLDT---KAYNILIA---------GFCRK 401

Query: 625 EILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH 683
           + L     + Q+M ++ I+P+V T++ +L+   +   F     LL ++     Q   +  
Sbjct: 402 KRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITF 461

Query: 684 GLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKR 741
           G L+ GY +     +AL +   +        +  YN L D L   G    A  +  E K 
Sbjct: 462 GTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKE 521

Query: 742 RQVWENVWSESCL 754
           + V  NV + + L
Sbjct: 522 KSVPANVTTFNAL 534



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 3/269 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++  L     V +A  +F   ++EG+      +  +IS   ++G  ++A S+ +SMK 
Sbjct: 322 STLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKE 381

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              K +   YN +I   C K         E+  +M   G++PD  T+N+LL+   + G +
Sbjct: 382 AGFKLDTKAYNILIAGFCRKK--RLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            A   L  +M+  G    + T+ TL+   CK  ++D A  I+  M    I PN V Y+T+
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID   K G +D A+ +F EMK   +  +  ++N +L         E+A  +  +M     
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERC 559

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
             D VT + L+      G+ D ++R  +Q
Sbjct: 560 FPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 3/217 (1%)

Query: 181 FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           F  K  E  +    +   MIS L + G+++ A ++  +    G+     A++ LI+ + R
Sbjct: 341 FHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCR 400

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
                EA  +   MK   ++P++ TYN ++    K G DF  V E+   M+ +G QP  I
Sbjct: 401 KKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAG-DFAAVDELLGKMIDDGCQPSVI 459

Query: 301 TFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           TF +L+   C  G + EA R +   M   GI  +   YNTL+D +CK   +DLA E+  E
Sbjct: 460 TFGTLVHGYCKVGKIDEALR-ILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDE 518

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           M  K++  NV T++ ++ G       + A  +  +M+
Sbjct: 519 MKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMR 555


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 195/380 (51%), Gaps = 17/380 (4%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ + +  L       V  FSALI+A+ + G   EA  +++ M   ++ P+ VTY+++ID
Sbjct: 307 AEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMID 366

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
             C +  +D      +F      G  PD ITFN+L+A   R    +    L +EM   G+
Sbjct: 367 GFCKQNRLDAAE--HMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGL 424

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             +  TY TL+   C+   ++ A +++ EM +  + PNVVT +T++DG    G+L DAL 
Sbjct: 425 VANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALE 484

Query: 391 MFSEMK-----------FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
           MF  M+           F G+  D  +YN ++      G+F EA  + +EM   GI  D 
Sbjct: 485 MFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 544

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           +TY++++ G  KQ + DE  +MF+ M +   SP+++T++TLI  Y K G+  + +++F E
Sbjct: 545 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCE 604

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             Q G+ AD + Y  LI    K   ++ A+ +  EM   G+ P+ +T  +++        
Sbjct: 605 MGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 664

Query: 560 TECTV---DDVERDLGKQKE 576
            E  V   +D++  +G Q E
Sbjct: 665 LERAVAMLEDLQMSVGYQLE 684



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 234/469 (49%), Gaps = 34/469 (7%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K+  A + F      G+  TV  F+ L+          EA+ +F+ M     KPN+VT+ 
Sbjct: 131 KLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFT 186

Query: 268 AVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
            +++  C +G V     V + D ML +G+QP++IT+ +++    + G   +A NL  +M 
Sbjct: 187 TLMNGLCREGRV--VEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 244

Query: 327 HRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
               I  ++  YNT++D + K  +   A  +  EM  K I P++VTY+ MI+G+  +GR 
Sbjct: 245 EVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRW 304

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            DA  +  EM    I  D V+++ +++ + K G+F EA  +  EM    I    VTY+++
Sbjct: 305 SDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSM 364

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G+ KQ + D    MF        SP+++T++TLI  Y +     + +++  E  +AGL
Sbjct: 365 IDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGL 424

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
            A+ + Y+ LI   C+ G + +A  LL EM   G+ PNVVT N+++D         C   
Sbjct: 425 VANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGL-------C--- 474

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI---IKVFGQLVAEKAGQGKKENRC 622
               D GK K++  +     +   D+ +A R  N +   ++ +  L+     +GK     
Sbjct: 475 ----DNGKLKDALEMFKAMQKSKMDI-DASRPFNGVEPDVQTYNILICGLINEGK----- 524

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               L    ++++M    I P+ +T+S++++   + +  ++A+ + + +
Sbjct: 525 ---FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 570



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 153/316 (48%), Gaps = 47/316 (14%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS--------------- 241
           S+MI    +  ++D A+++F     +G    +  F+ LI+ Y R+               
Sbjct: 362 SSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 421

Query: 242 ---------------GYCQ-----EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
                          G+CQ      A  +   M    + PN+VT N ++D     G   K
Sbjct: 422 AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNG-KLK 480

Query: 282 HVVEIFDDMLR-----------NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
             +E+F  M +           NGV+PD  T+N L+      G +  A  L+ EM HRGI
Sbjct: 481 DALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGI 540

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             D  TY++++D +CK +++D A ++   M +K+ SP+VVT++T+I GY KAG +DD L 
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLE 600

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +F EM   GI  D ++Y T++  + K+   + AL + +EM SSG+  D +T   +L G  
Sbjct: 601 LFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLW 660

Query: 451 KQGKYDEVRRMFEQMK 466
            + + +    M E ++
Sbjct: 661 SKEELERAVAMLEDLQ 676



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 148/305 (48%), Gaps = 32/305 (10%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           +++F  M+R+   P  I F  L+ V  R G  +   +L  +M    +  + +++  L+  
Sbjct: 66  IDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKC 125

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM-------- 395
            C  +++  A     ++      P VVT++T++ G     R+ +AL++F +M        
Sbjct: 126 FCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPNVVTF 185

Query: 396 ---------------------KFLGIGL--DRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
                                + L  GL  ++++Y T++    K+G    AL + ++ME 
Sbjct: 186 TTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEE 245

Query: 433 -SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            S I  + V YN ++ G  K G++ +   +F +M+   + P+++TY+ +I+ +   G + 
Sbjct: 246 VSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWS 305

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +A Q+ +E  +  +  DVV +SALI+A  K G    A  L DEM    I P+ VTY+S+I
Sbjct: 306 DAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMI 365

Query: 552 DAFGR 556
           D F +
Sbjct: 366 DGFCK 370



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 149/330 (45%), Gaps = 50/330 (15%)

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A ++   M      P+V+ +  ++    + GR D  +++  +M+ L +  +  S+  
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++  +    +   AL    ++   G     VT+N LL G   + +  E   +F QM    
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM---- 177

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             PN++T++TL++   + G   EA+ +     + GL+ + + Y  ++D +CK G   SA+
Sbjct: 178 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 530 SLLDEMTKEG-IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           +LL +M +   I PNVV YN+IID   +               G+  ++ NL        
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKD--------------GRHSDAHNLFI------ 277

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLKI 641
            ++QE         ++F  +V            C     CI G       + Q+M + KI
Sbjct: 278 -EMQEK--------EIFPDIVTYN---------CMINGFCISGRWSDAEQLLQEMLERKI 319

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            P+VVTFSA++NA  +   F +A  L +E+
Sbjct: 320 NPDVVTFSALINAFVKEGKFFEAEELYDEM 349



 Score = 42.7 bits (99), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQV-YGVAHGL 685
           L +F +M     KPNVVTF+ ++N   R     +A  LL+ +    L  NQ+ YG     
Sbjct: 171 LDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDG 226

Query: 686 LMGYRDNIWVQALSLFDEVKLMDSSTASA-FYNALTDMLWHFGQKRGAQLVVLEGKRRQV 744
           +    D   V AL+L  +++ +     +   YN + D LW  G+   A  + +E + +++
Sbjct: 227 MCKMGDT--VSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEI 284

Query: 745 WENVWSESCL 754
           + ++ + +C+
Sbjct: 285 FPDIVTYNCM 294



 Score = 39.3 bits (90), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 50/247 (20%), Positives = 100/247 (40%), Gaps = 37/247 (14%)

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L  G+ +    D+   +F  M      P+++ +  L+ V  + G     + + ++ +   
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           +  +   ++ L+   C    +  A+S   ++TK G  P VVT+N+++          C  
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGL-------CVE 164

Query: 565 DDVER--DLGKQKESAN-------LDAMCSQD---------DKDVQEAGRTDNQIIKVFG 606
           D +    DL  Q    N       ++ +C +          D+ + E G   NQI   +G
Sbjct: 165 DRISEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDR-MLEDGLQPNQI--TYG 221

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK-IKPNVVTFSAILNACSRCNSFEDAS 665
            +V      G        + +  L + +KM ++  I PNVV ++ I++   +     DA 
Sbjct: 222 TIVDGMCKMG--------DTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAH 273

Query: 666 MLLEELR 672
            L  E++
Sbjct: 274 NLFIEMQ 280


>gi|222626074|gb|EEE60206.1| hypothetical protein OsJ_13175 [Oryza sativa Japonica Group]
          Length = 789

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 156/601 (25%), Positives = 274/601 (45%), Gaps = 58/601 (9%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGG----LWEAARNLFNEMVHR---GIDQDIFTYNTLLD 342
           M  +GV P   T+N++LA C+R       ++    LF EM H     +  D+ TYNTLL 
Sbjct: 1   MKASGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDPSPSVRPDLTTYNTLLA 60

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A    A  D +  ++  M    + P+  +Y  ++D +A AG L     +F+EM   G   
Sbjct: 61  AAAVRALSDQSEMLLRTMLEAGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTP 120

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D  +Y  ++  +  +G   EA+ V ++M++ G    A TY  LL  YG+QG++D VR +F
Sbjct: 121 DPSAYLGLMEAHTLVGATAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELF 180

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +M+   V P+  TY+ L  V+  GG +KE +++F++   + ++ D+     ++ A  + 
Sbjct: 181 REMRT-TVPPDTATYNVLFRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRG 239

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC------------------TV 564
           GL E A  +LD +T EG+ P    Y  +++A G +A  E                   T 
Sbjct: 240 GLHEDAREVLDYITTEGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETY 299

Query: 565 DDVERDLGK----QKESANLDAMCS----QDDKDVQEA-------GRTDNQIIKVFGQLV 609
           + +     K    Q+  A    M +    Q DKD  +A       G   +  +K + ++ 
Sbjct: 300 NALANAFAKGGLFQEAEAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMR 359

Query: 610 AEKAGQGKKENRCRQEILCILGV-------FQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
             +    ++         CI GV       F+++  +   P+++ +  +L+  +R + + 
Sbjct: 360 KSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWT 419

Query: 663 DASMLLEELRL-FDNQVYGVAHGLLMGYRDNI--WVQALSLFDEVKLMDSSTASAFYNAL 719
           DA  LLEE++    +  + V   ++ G  D+   W     + D   L     +  F+NAL
Sbjct: 420 DAYDLLEEMKTNRASSTHQVIASMIKGEYDDDSNWQMVEYVLDNSNLEGCDYSLRFFNAL 479

Query: 720 TDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL----DLHLMSSGAARAMVHAWLLNI 775
            D+LW FGQK  A  V+ +  +  ++  ++ ++ L    D+H MS G +   V  WL  +
Sbjct: 480 LDVLWWFGQKGRAARVLDQALKYGLFPELFRDTKLVWSADVHRMSVGGSLVAVSVWLNKL 539

Query: 776 HSIVFEGHELPKLLS--ILTGWGKHSKVVGDGALRRAVEVLLTG-MGAPFWVANCNLGRF 832
           +  +    +LP+L S  +L G  + S V     + + V   L   + + F     N GR 
Sbjct: 540 YDRLKGDEDLPQLASVVVLRGQMEKSTVTRGLPIAKVVYSFLNDTLSSSFHYPKWNKGRI 599

Query: 833 I 833
           I
Sbjct: 600 I 600



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 139/284 (48%), Gaps = 9/284 (3%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           +G   T   +  L+  YGR G       +F  M R  + P+  TYN +    G GG  FK
Sbjct: 151 DGCPPTAATYRVLLDLYGRQGRFDGVRELFREM-RTTVPPDTATYNVLFRVFGDGGF-FK 208

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            VVE+F DML + V+PD  T  +++  C RGGL E AR + + +   G+      Y  L+
Sbjct: 209 EVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTGLV 268

Query: 342 DAICKGAQMD---LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM-KF 397
           +A+   A  +   +AF +M E+ +    P + TY+ + + +AK G   +A  +FS M   
Sbjct: 269 EALGHAAMYEEAYVAFNMMTEIGSL---PTIETYNALANAFAKGGLFQEAEAIFSRMTNN 325

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             I  D+ S++ ++  Y +  + ++A+    EM  S    D  +   +L  Y   G  DE
Sbjct: 326 AAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDE 385

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
            +  FE++++    P+++ Y  ++ +Y++   + +A  +  E K
Sbjct: 386 SKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMK 429



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 154/330 (46%), Gaps = 3/330 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +     +F      G+     A+  L+ A+   G   EA++V   M+     P   TY
Sbjct: 101 GNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAEAVAVLRQMQADGCPPTAATY 160

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
             ++D  G+ G  F  V E+F +M R  V PD  T+N L  V   GG ++    LF +M+
Sbjct: 161 RVLLDLYGRQG-RFDGVRELFREM-RTTVPPDTATYNVLFRVFGDGGFFKEVVELFQDML 218

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
           H  ++ DI T   ++ A  +G   + A E++  +  + + P    Y+ +++    A   +
Sbjct: 219 HSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTGLVEALGHAAMYE 278

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM-ESSGIRKDAVTYNAL 445
           +A   F+ M  +G      +YN + + +AK G F+EA  +   M  ++ I+KD  +++AL
Sbjct: 279 EAYVAFNMMTEIGSLPTIETYNALANAFAKGGLFQEAEAIFSRMTNNAAIQKDKDSFDAL 338

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +  Y +  + D+  + + +M+    +P+  +   +++ Y   G+  E+ + F E +    
Sbjct: 339 IEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSMVT 398

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEM 535
              ++ Y  ++    +N     A  LL+EM
Sbjct: 399 VPSIIAYCMMLSLYARNDRWTDAYDLLEEM 428



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 4/239 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L R  G+ G + + ++ F   +   E + D     + M++  GR G  + A+ + + 
Sbjct: 194 YNVLFRVFGDGGFFKEVVELFQ-DMLHSEVEPDIDTCENVMVAC-GRGGLHEDAREVLDY 251

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              EG   T  A++ L+ A G +   +EA   FN M      P + TYNA+ +A  KGG+
Sbjct: 252 ITTEGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKGGL 311

Query: 279 DFKHVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            F+    IF  M  N  +Q D+ +F++L+    +G   + A   + EM     + D  + 
Sbjct: 312 -FQEAEAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSL 370

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
             +L+A C    +D + E   E+ +    P+++ Y  M+  YA+  R  DA ++  EMK
Sbjct: 371 EGVLNAYCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMK 429


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 213/418 (50%), Gaps = 12/418 (2%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++  L   G+V  A+ +F+   +      V  +  LI  +   G  + A+ + + M    
Sbjct: 265 LLKALCDAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEMVAGG 321

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWE 316
           ++PN   Y +V+   C KG +     + + +DM++  V  D   + ++L+  C++G L  
Sbjct: 322 VEPNATVYTSVVALLCDKGWI--SDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLV- 378

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +AR  F+EM  +G+  D  TY T+++ +C+  +++ A +++ EM A+ +  + VTY+ +I
Sbjct: 379 SARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLI 438

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DGY K G++ +A  M + M   G+  + V+Y  +     K G  + A  +  EM + G+ 
Sbjct: 439 DGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLE 498

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +A TYN+L+ G  K G  ++  R    M   C+ P++ TY+TLID   K G    A  +
Sbjct: 499 LNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSL 558

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF-- 554
            +E    G+K  +V Y+ L++  C +G VE    LLD M ++ I PN  TYNS++  +  
Sbjct: 559 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCI 618

Query: 555 --GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
                +TTE       RD+G  + + N+        ++++EA    +++I+   +L A
Sbjct: 619 ENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTA 676



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 253/526 (48%), Gaps = 46/526 (8%)

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           ++L RL  +D A  +F+    E     V +++ L+ A   +G  ++A  +F+ M      
Sbjct: 237 AVLSRL-PLDEAIELFQ----ELPHKNVCSYNILLKALCDAGRVKDARQLFDEMAS---A 288

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV-CSRGGLWEAA 318
           P++VTY  +I   C  G  + ++ V++ D+M+  GV+P+   + S++A+ C +G + +A 
Sbjct: 289 PDVVTYGILIHGHCALG--ELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDAL 346

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           R +  +MV R +  D   Y T+L   C    +  A     EM  K ++ + VTY+TMI+G
Sbjct: 347 R-VVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMING 405

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             +A  L++A  +  EM    + +D V+Y  ++  Y K G+  EA  +   M   G+  +
Sbjct: 406 LCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPN 465

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VTY AL  G  KQG       +  +M    +  N  TY++LI+   K G  ++AM+   
Sbjct: 466 VVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMA 525

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +   A LK DV  Y+ LIDALCK+G ++ A SLL EM  +GI+P +VTYN +++ F  S 
Sbjct: 526 DMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 585

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
             E          G +K    LD M    +K++     T N ++K   Q   E   +   
Sbjct: 586 RVE----------GGKKL---LDWML---EKNIHPNAATYNSLMK---QYCIENNMKSTT 626

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
           E            +++ M    + PN  T++ ++    +  + ++A    +E+     ++
Sbjct: 627 E------------IYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRL 674

Query: 679 YGVAHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASAFYNALTDM 722
              ++  L+    +   +V+A  LF +++    +  S  Y+   D+
Sbjct: 675 TATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDL 720



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 199/448 (44%), Gaps = 43/448 (9%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           E Y +T   FS+  +++     C  +  +   +++Y + P+    NAV+       +   
Sbjct: 191 EHYISTYKTFSSDPASFDFLLLCLPSAPLLRRLRQYGISPSPEACNAVLSR-----LPLD 245

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             +E+F ++    V     ++N LL      G  + AR LF+EM       D+ TY  L+
Sbjct: 246 EAIELFQELPHKNV----CSYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILI 298

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
              C   +++ A +++ EM A  + PN   Y++++      G + DAL +  +M    + 
Sbjct: 299 HGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVI 358

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
           LD   Y TVLS +   G    A     EM+  G+  D VTY  ++ G  +  + +E  ++
Sbjct: 359 LDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKL 418

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            ++M A  +  + +TY+ LID Y K G   EA Q+     Q G+  +VV Y+AL D LCK
Sbjct: 419 LQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCK 478

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
            G V++A  LL EM+ +G+  N  TYNS+I+   ++   E             +  A++D
Sbjct: 479 QGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLE----------QAMRTMADMD 528

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
             C + D             +  +  L+      G  +            + Q+M    I
Sbjct: 529 TACLKPD-------------VYTYTTLIDALCKSGDLDR--------AHSLLQEMLDKGI 567

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLE 669
           KP +VT++ ++N        E    LL+
Sbjct: 568 KPTIVTYNVLMNGFCMSGRVEGGKKLLD 595



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 190/394 (48%), Gaps = 3/394 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT ++  L ++G  S A++     V+R+   ++   L + ++S     G +  A+  F+ 
Sbjct: 329 YTSVVALLCDKGWISDALRVVEDMVQRKVILDEA--LYTTVLSGFCNKGDLVSARRWFDE 386

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G       ++ +I+   R+   +EA  +   M    L  + VTY  +ID   K G 
Sbjct: 387 MQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRG- 445

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                 ++ + M++ GV P+ +T+ +L     + G  +AA  L +EM ++G++ +  TYN
Sbjct: 446 KMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYN 505

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L++ +CK   ++ A   MA+M    + P+V TY+T+ID   K+G LD A ++  EM   
Sbjct: 506 SLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDK 565

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI    V+YN +++ +   GR E    +   M    I  +A TYN+L+  Y  +      
Sbjct: 566 GIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKST 625

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +++ M++  V PN  TY+ LI  + K    KEA+    E  Q G +     YSALI  
Sbjct: 626 TEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRL 685

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           L K      A  L  +M KEG+      Y+  ID
Sbjct: 686 LNKKKKFVEARELFHDMRKEGLTAESDVYDFYID 719



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 183/382 (47%), Gaps = 3/382 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT +L    N+G+   A + F   ++R+    D G   + MI+ L R  +++ A+ + + 
Sbjct: 364 YTTVLSGFCNKGDLVSARRWFD-EMQRKGLATD-GVTYTTMINGLCRAVELEEAEKLLQE 421

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                       ++ LI  Y + G   EA  + N+M +  + PN+VTY A+ D   K G 
Sbjct: 422 MWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQG- 480

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           D +   E+  +M   G++ +  T+NSL+    + G  E A     +M    +  D++TY 
Sbjct: 481 DVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYT 540

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+DA+CK   +D A  ++ EM  K I P +VTY+ +++G+  +GR++    +   M   
Sbjct: 541 TLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEK 600

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            I  +  +YN+++  Y      +    + K M S  +  +  TYN L+ G+ K     E 
Sbjct: 601 NIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEA 660

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
               ++M          +YS LI + +K   + EA ++F + ++ GL A+  +Y   ID 
Sbjct: 661 LYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDL 720

Query: 519 LCKNGLVESAVSLLDEMTKEGI 540
                 +ES ++L DE+ +  I
Sbjct: 721 NFNEDNLESTLALCDELVEASI 742



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 177/389 (45%), Gaps = 64/389 (16%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G+ P     N   AV SR  L EA   LF E+ H+    ++ +YN LL A+C   ++  A
Sbjct: 227 GISPSPEACN---AVLSRLPLDEAI-ELFQELPHK----NVCSYNILLKALCDAGRVKDA 278

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
            ++  EM +   +P+VVTY  +I G+   G L++A+ +  EM   G+  +   Y +V+++
Sbjct: 279 RQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVAL 335

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
               G   +AL V ++M    +  D   Y  +L G+  +G     RR F++M+   ++ +
Sbjct: 336 LCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATD 395

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +TY+T+I+   +    +EA ++ +E     L  D V Y+ LID  CK G +  A  + +
Sbjct: 396 GVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHN 455

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
            M + G+ PNVVTY ++ D                              +C Q D     
Sbjct: 456 AMVQRGVTPNVVTYTALTDG-----------------------------LCKQGD----- 481

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL----CILGVFQK-------MHKLKIK 642
                   ++   +L+ E + +G + N C    L    C  G  ++       M    +K
Sbjct: 482 --------VQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLK 533

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEEL 671
           P+V T++ +++A  +    + A  LL+E+
Sbjct: 534 PDVYTYTTLIDALCKSGDLDRAHSLLQEM 562



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 125/315 (39%), Gaps = 40/315 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+     RG+ ++A Q     V+R    N      +A+   L + G V  A  +   
Sbjct: 434 YTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPN--VVTYTALTDGLCKQGDVQAANELLHE 491

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
             N+G       +++LI+   ++GY ++A+     M    LKP++ TY  +IDA C  G 
Sbjct: 492 MSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGD 551

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D  H   +  +ML  G++P  +T+N L+      G  E  + L + M+ + I  +  TY
Sbjct: 552 LDRAH--SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATY 609

Query: 338 NTLL-----------------------------------DAICKGAQMDLAFEIMAEMPA 362
           N+L+                                      CK   M  A     EM  
Sbjct: 610 NSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQ 669

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
           K       +YS +I    K  +  +A  +F +M+  G+  +   Y+  + +       E 
Sbjct: 670 KGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLES 729

Query: 423 ALLVCKEMESSGIRK 437
            L +C E+  + I K
Sbjct: 730 TLALCDELVEASIVK 744


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 192/391 (49%), Gaps = 40/391 (10%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +D A   +   L+ G    V  +S++I+A  ++    +A+ V  SM +  + PN  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N+++   C  G    K  +     M  +GV+PD +T+NSL+    + G    AR +F+ M
Sbjct: 273 NSIVHGYCSSG--QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 326 VHRGIDQDIFTYNTLLDAIC-KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
             RG+  +I TY TLL     KGA +++   ++  M    I PN   +S +I  YAK G+
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL------------------- 425
           +D A+ +FS+M+  G+  D V+Y TV+ I  K GR E+A+                    
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 426 ----------------VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
                           +  EM   GI  D + +N+++  + K+G+  E  ++F+ M    
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           V P+++TYSTLID Y   G   EA ++       G+K D V Y+ LI+  CK   +E A+
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            L  EM   G+ P+++TYN I+    ++  T
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRT 600



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 247/513 (48%), Gaps = 44/513 (8%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V +++ +I+ + + G   +A   ++ M    + PN+VTY+++I A C    +D    +E+
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD--KAMEV 256

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
              M++NGV P+  T+NS++   CS G   EA      +M   G++ D+ TYN+L+D +C
Sbjct: 257 LTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAI-GFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  +   A ++   M  + + P + TY T++ GYA  G L +   +   M   GI  +  
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            ++ ++  YAK G+ ++A+LV  +M   G+  D VTY  ++G   K G+ ++  R FEQM
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             + +SP  + Y++LI        + +A ++  E    G+  D + ++++ID+ CK G V
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
             +  L D M + G++P+++TY+++ID +       C         GK  E+  L  + S
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGY-------CLA-------GKMDEATKL--LAS 539

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
                ++    T N +I  + ++              R E   +L  F++M    + P++
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKI-------------SRMEDALVL--FREMESSGVSPDI 584

Query: 646 VTFSAILNACSRCNSFEDASMLL----EELRLFDNQVYGVA-HGLLMGYRDNIWVQALSL 700
           +T++ IL    +      A  L     E     +   Y +  HGL    ++N+  +AL +
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC---KNNLTDEALRM 641

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           F  + L D    +  +N +   L   G+   A+
Sbjct: 642 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 176/320 (55%), Gaps = 1/320 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y FS LI AY + G   +A+ VF+ M++  L P+ VTY  VI    K G   +  +  F+
Sbjct: 375 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG-RVEDAMRYFE 433

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M+   + P  I +NSL+        W+ A+ L  EM+ RGI  D   +N+++D+ CK  
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++  + ++   M    + P+++TYST+IDGY  AG++D+A  + + M  +G+  D V+YN
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+++ Y K+ R E+AL++ +EMESSG+  D +TYN +L G  +  +    + ++  +   
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
                L TY+ ++    K  L  EA+++F+      L+ +   ++ +I AL K G  + A
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 529 VSLLDEMTKEGIRPNVVTYN 548
             L   ++  G+ P+V TY+
Sbjct: 674 KDLFAALSANGLVPDVRTYS 693



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 233/485 (48%), Gaps = 34/485 (7%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKRYNLKPNLVT 265
           G++DL        + +G+     AF+ L+          +A+  V   M +    PN+ +
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 266 YNAVIDACGKGGVD---FKHVVEIFDDMLRNG--VQPDRITFNSLLAVCSRGGLWEAARN 320
           YN ++    KG  D    +  +E+   M  +G    PD +++ +++    + G  + A  
Sbjct: 165 YNILL----KGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
            ++EM+ RGI  ++ TY++++ A+CK   MD A E++  M    + PN  TY++++ GY 
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
            +G+  +A+    +M   G+  D V+YN+++    K GR  EA  +   M   G++ +  
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY  LL GY  +G   E+  + + M  + + PN   +S LI  Y+K G   +AM +F + 
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGR- 556
           +Q GL  D V Y  +I  LCK+G VE A+   ++M  E + P  + YNS+I +   F + 
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 557 SATTECTVDDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIKV--------FG 606
               E  ++ ++R +       N  +D+ C +    V E+ +  + ++++        + 
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEG--RVIESEKLFDLMVRIGVKPDIITYS 518

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            L+      GK +   +        +   M  + +KP+ VT++ ++N   + +  EDA +
Sbjct: 519 TLIDGYCLAGKMDEATK--------LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570

Query: 667 LLEEL 671
           L  E+
Sbjct: 571 LFREM 575



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 182/342 (53%), Gaps = 3/342 (0%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD 279
           ++G    V  +++L+    ++G C EA  +F+SM +  LKP + TY  ++     KG + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
             H   + D M+RNG+ P+   F+ L+   ++ G  + A  +F++M  +G++ D  TY T
Sbjct: 357 EMH--GLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++  +CK  +++ A     +M  + +SP  + Y+++I       + D A  +  EM   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I LD + +N+++  + K GR  E+  +   M   G++ D +TY+ L+ GY   GK DE  
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++   M +  + P+ +TY+TLI+ Y K    ++A+ +FRE + +G+  D++ Y+ ++  L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +     +A  L   +T+ G +  + TYN I+    ++  T+
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 137/567 (24%), Positives = 257/567 (45%), Gaps = 61/567 (10%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY---NLKPNLVTYNA 268
           A+++F+  L  G G ++Y  +  ++   R      A+S +N M R     + PNL TY  
Sbjct: 38  ARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYGI 96

Query: 269 VIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           +I +C   G +D         ++++ G + D I F  LL  +C+     +A   +   M 
Sbjct: 97  LIGSCCCAGRLDLGFAA--LGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP--AKNISPNVVTYSTMIDGYAKAGR 384
             G   ++F+YN LL  +C   +   A E++  MP    +  P+VV+Y+T+I+G+ K G 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD A   + EM   GI  + V+Y+++++   K    ++A+ V   M  +G+  +  TYN+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++ GY   G+  E     ++M +D V P+++TY++L+D   K G   EA ++F    + G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           LK ++  Y  L+      G +     LLD M + GI PN   ++ +I A+ +       V
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG----KV 390

Query: 565 DDVERDLGKQKESA-NLDAMCSQDDKDVQ-EAGRTDNQIIKVFGQLVAEKAGQGK----- 617
           D       K ++   N D +       +  ++GR ++  ++ F Q++ E+   G      
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA-MRYFEQMIDERLSPGNIVYNS 449

Query: 618 ---------KENRCRQEILCILG----------------------------VFQKMHKLK 640
                    K ++ ++ IL +L                             +F  M ++ 
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQAL 698
           +KP+++T+S +++        ++A+ LL  +     +   V +  L+ GY + +    AL
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 699 SLFDEVKLMDSSTASAFYNALTDMLWH 725
            LF E++    S     YN +   L+ 
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQ 596



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 183/358 (51%), Gaps = 1/358 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++  L + G+   A+ +F++    G    +  +  L+  Y   G   E   + + M R
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN   ++ +I A  K G      + +F  M + G+ PD +T+ +++ +  + G  E
Sbjct: 368 NGIHPNHYVFSILICAYAKQG-KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A   F +M+   +      YN+L+ ++C   + D A E++ EM  + I  + + ++++I
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D + K GR+ ++  +F  M  +G+  D ++Y+T++  Y   G+ +EA  +   M S G++
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTYN L+ GY K  + ++   +F +M++  VSP+++TY+ ++    +      A ++
Sbjct: 547 PDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +    ++G + ++  Y+ ++  LCKN L + A+ +   +    ++    T+N +I A 
Sbjct: 607 YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 664



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 204/489 (41%), Gaps = 84/489 (17%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ---DIF 335
           D +HV   FD++LR G        N  LA  +R     AA + +N M   G D+   ++ 
Sbjct: 37  DARHV---FDELLRRGRGASIYGLNCALADVARHS-PAAAVSRYNRMARAGADEVTPNLC 92

Query: 336 TYNTLLDAICKGAQMDLAFE------------------------------------IMAE 359
           TY  L+ + C   ++DL F                                     ++  
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG--IGLDRVSYNTVLSIYAKL 417
           M      PNV +Y+ ++ G     R  +AL +   M   G     D VSY TV++ + K 
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G  ++A     EM   GI  + VTY++++    K    D+   +   M  + V PN  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           ++++  Y   G  KEA+   ++    G++ DVV Y++L+D LCKNG    A  + D MTK
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
            G++P + TY +++  +   AT    V+              LD M           G  
Sbjct: 333 RGLKPEITTYGTLLQGY---ATKGALVE----------MHGLLDLMVRN--------GIH 371

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
            N    VF  L+   A QGK +    Q +L    VF KM +  + P+ VT+  ++    +
Sbjct: 372 PNHY--VFSILICAYAKQGKVD----QAML----VFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 658 CNSFEDASMLLEEL---RLF-DNQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTA 712
               EDA    E++   RL   N VY  + H L +  +   W +A  L  E+        
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK---WDKAKELILEMLDRGICLD 478

Query: 713 SAFYNALTD 721
           + F+N++ D
Sbjct: 479 TIFFNSIID 487



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 192/379 (50%), Gaps = 13/379 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           ++ L+     +G+  +A+    F+  R++  N        +I IL + G+V+ A   FE 
Sbjct: 377 FSILICAYAKQGKVDQAM--LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQ 434

Query: 219 ALNEGY--GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
            ++E    GN VY  ++LI +        +A  +   M    +  + + +N++ID+  K 
Sbjct: 435 MIDERLSPGNIVY--NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492

Query: 277 GVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G     V+E   +FD M+R GV+PD IT+++L+      G  + A  L   MV  G+  D
Sbjct: 493 G----RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             TYNTL++  CK ++M+ A  +  EM +  +SP+++TY+ ++ G  +  R   A  ++ 
Sbjct: 549 CVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            +   G  L+  +YN +L    K    +EAL + + +  + ++ +  T+N ++G   K G
Sbjct: 609 GITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVG 668

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           + DE + +F  + A+ + P++ TYS + +   + GL +E   +F   ++ G  A+  + +
Sbjct: 669 RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728

Query: 514 ALIDALCKNGLVESAVSLL 532
           +++  L + G +  A + L
Sbjct: 729 SIVRKLLQRGDITRAGTYL 747



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 145/346 (41%), Gaps = 77/346 (22%)

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA--FEIMAEMPAKNISPNVVTYS 373
           E AR++F+E++ RG    I+  N  L  + + +       +  MA   A  ++PN+ TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I     AGRLD           LG              +A LG       V K+    
Sbjct: 96  ILIGSCCCAGRLD-----------LG--------------FAALGN------VIKK---- 120

Query: 434 GIRKDAVTYNALLGGYGKQGK----YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           G R DA+ +  LL G     +     D V R   Q+   C+ PN+ +Y+ L+        
Sbjct: 121 GFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL--GCI-PNVFSYNILLKGLCDENR 177

Query: 490 YKEAMQIFREFKQAG--LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
            +EA+++ +     G     DVV Y+ +I+   K G ++ A     EM   GI PNVVTY
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237

Query: 548 NSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
           +SII A  ++                Q     ++ + S     V    RT N I+  +  
Sbjct: 238 SSIIAALCKA----------------QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
                +GQ K+           +G  +KMH   ++P+VVT++++++
Sbjct: 282 -----SGQPKEA----------IGFLKKMHSDGVEPDVVTYNSLMD 312


>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
          Length = 1435

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 217/416 (52%), Gaps = 8/416 (1%)

Query: 157 DDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF 216
           D+  F++R +G    W +A+  F +  +     +   +  + ++ +LGR  +  +A+ +F
Sbjct: 156 DEVAFVVRAVGE-SSWRRALDAFEWLARSSAPAS---RAVAVVLGVLGRARQDSIAEEVF 211

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
                EG   TV  F+A++  Y RSG   +A  + ++M    + P+LV++N +I+A  K 
Sbjct: 212 LRFAGEG--ATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKS 269

Query: 277 GVDFKHV-VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G     V +++  ++ ++G++PD IT+N+L++ CS+    E A  +F +M+      D++
Sbjct: 270 GCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLW 329

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYN ++    +  + + A  +  E+  K   P+ +TY++++  +AK G +D   +   ++
Sbjct: 330 TYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQL 389

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G   + ++YNT++ +Y K+GR + A+ +  EM + G   DAVTY  ++   GK  + 
Sbjct: 390 VKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRI 449

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            E  ++ E M    + P L+ +S LI  Y+KGG   +A   F     +G+K D + Y  +
Sbjct: 450 AEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVM 509

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           +D   ++G  E  + L  +M  +  RP+   Y  ++ A  +    E  +++V +D+
Sbjct: 510 LDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCE-EIEEVIQDM 564



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 151/657 (22%), Positives = 293/657 (44%), Gaps = 52/657 (7%)

Query: 231  FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI-DACGKGGVDFKHVVEIFDD 289
            + ++IS Y + G+ + A  + +   +  +  N+++   +I +A GK  +      EI   
Sbjct: 713  YESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGK--IKLWQQAEILVK 770

Query: 290  MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
             LR     DR  +N+L+   +  GL+E AR +F+ M+  G    + + N ++ A+    +
Sbjct: 771  GLRQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGR 830

Query: 350  MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            +D  + ++ E+   N   +  T   ++D +AKAG + + + +++ MK  G   +   Y +
Sbjct: 831  LDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRS 890

Query: 410  VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
            ++S+     RF +  L+  EME +G + D    NALL  Y   G +D   +++  +    
Sbjct: 891  MISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAG 950

Query: 470  VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            + P+  TY+TLI +Y +    +E   +  E  + GL   +  Y +L+ A  K  L E A 
Sbjct: 951  LEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQAD 1010

Query: 530  SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
             + +EM  +  + N   Y+ ++  +              R+ G   ++ NL A+  +D  
Sbjct: 1011 QIFEEMRSKSYQLNRSIYHMMMKIY--------------RNAGNHSKAENLLAVMKED-- 1054

Query: 590  DVQEAGRTDNQIIKVFGQL----VAEKAGQGKKENRCRQEILCILGVFQ----------- 634
             ++    T + ++  +G       AE      K +      L    VF            
Sbjct: 1055 GIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHG 1114

Query: 635  -----KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY 689
                 +M +  ++P+   ++  + A S C    DA +LL+ L+   +  + +   LL   
Sbjct: 1115 TTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQ---DCGFDLPIRLLTER 1171

Query: 690  RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVW-ENV 748
              ++  +  +  +E++ ++ S A  F NA+ D+LW F  +  A  +      R ++ +NV
Sbjct: 1172 TPSLLSEIANYLEELEALEDSAALNFVNAVEDLLWAFECRATASRIFQLAVERSIYRDNV 1231

Query: 749  W----SESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGH-ELPKLLSILTGWGKHSKVVG 803
            +     +   D   +S+GAA   +  WL ++     +G  E PK + ++TG G+++ V  
Sbjct: 1232 FRVAQKDWGADFRKLSAGAALVGLTLWLDHMQDASLQGSPESPKSVVLVTGEGEYNMV-- 1289

Query: 804  DGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDDRTH 860
              +LR+ +   L  MG+PF       GRF+     +  WL++S     L L D   H
Sbjct: 1290 --SLRKTIRAYLLEMGSPFLPCRARSGRFVVKDYSLKMWLKDSPFCMDLELKDAPAH 1344



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 186/395 (47%), Gaps = 42/395 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQE--AISVFNSM 254
           +AM+ +  R G+ D A+ + +T  + G    + +F+ LI+A  +SG      A+ +   +
Sbjct: 225 NAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEV 284

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML----------------------- 291
           ++  L+P+++TYN +I AC +   + +  V +F+DM+                       
Sbjct: 285 RQSGLRPDVITYNTLISACSQSS-NLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGK 343

Query: 292 ------------RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
                         G  PD IT+NSLL   ++ G  +   +   ++V  G  ++  TYNT
Sbjct: 344 AEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNT 403

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++    K  ++DLA  +  EM A   +P+ VTY+ MID   K  R+ +A  +  +M   G
Sbjct: 404 MIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAG 463

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           +    ++++ ++  YAK GR  +A      M +SG++ D + Y  +L  + + G  +++ 
Sbjct: 464 LKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKML 523

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            ++ +M  D   P+   Y  L+   +K    +E  ++ ++ +        ++ + LI A 
Sbjct: 524 CLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLCRMNLGIISTMLIKAR 583

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           C    V     LL +   +G +P++ +  SI++A+
Sbjct: 584 C----VSQGAKLLKKACLQGYKPDIKSLRSIMNAY 614



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 141/616 (22%), Positives = 263/616 (42%), Gaps = 77/616 (12%)

Query: 154 CG-ADDYTFLLRELGNRGEWSKAIQ----CFAFA----VKREERKNDQGKLA-------- 196
           CG A++   L REL  +G    AI      +AFA    V + E   +Q   A        
Sbjct: 341 CGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEIT 400

Query: 197 -SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + MI + G++G++DLA  +++     G       ++ +I + G+     EA  V   M 
Sbjct: 401 YNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMT 460

Query: 256 RYNLKPNLVTYNAVIDACGKGG--VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
              LKP L+ ++A+I A  KGG   D ++    FD M+ +GV+PDR+ +  +L V +R G
Sbjct: 461 DAGLKPTLIAFSALICAYAKGGRRADAENT---FDCMIASGVKPDRLAYLVMLDVFARSG 517

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             E    L+ +M++     D   Y  LL A+ K  + +   E++ +M       N+   S
Sbjct: 518 DTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELL-CRMNLGIIS 576

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL----LVCKE 429
           TM+    KA  +     +  +    G   D  S  ++++ Y    + EE L     +C+ 
Sbjct: 577 TML---IKARCVSQGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECICEH 633

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           +  S   +D ++  +++    KQ       +  +++       N   Y  LI    +   
Sbjct: 634 VSFS---QDLISECSIMLLCRKQTSISAYEQYSQRLMLKYPGQNCNLYEYLITCLIEAEF 690

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
           + EA Q+F + +  G++A   +Y ++I   CK G  E+A  L+D+  + GI  N+++   
Sbjct: 691 FSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRV 750

Query: 550 -IIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
            II+A+G+              L +Q E            K +++A   D +I       
Sbjct: 751 IIIEAYGKI------------KLWQQAEILV---------KGLRQASGIDRRIWNALIHA 789

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
            AE     K              VF  M K    P V + + ++ A       ++  +++
Sbjct: 790 YAESGLYEKAR-----------AVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVV 838

Query: 669 EELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAF------YNALTDM 722
           EEL+  + ++      LL+    + + +A  +F+ +K+ +   A+ +      Y ++  +
Sbjct: 839 EELQDMNFKISKSTVLLLL----DAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISL 894

Query: 723 LWHFGQKRGAQLVVLE 738
           L H  + R  +L++ E
Sbjct: 895 LCHHNRFRDVELMIAE 910



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/360 (23%), Positives = 158/360 (43%), Gaps = 1/360 (0%)

Query: 194  KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
            ++ +A+I      G  + A+ +F+  +  G   TV + + ++ A    G   E   V   
Sbjct: 781  RIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEE 840

Query: 254  MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            ++  N K +  T   ++DA  K G D   V++I++ M   G  P+   + S++++     
Sbjct: 841  LQDMNFKISKSTVLLLLDAFAKAG-DVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHN 899

Query: 314  LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             +     +  EM   G   D+   N LL+        D   ++   +    + P+  TY+
Sbjct: 900  RFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYN 959

Query: 374  TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            T+I  Y ++ R ++   + +EM   G+     SY ++L+  AK    E+A  + +EM S 
Sbjct: 960  TLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSK 1019

Query: 434  GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
              + +   Y+ ++  Y   G + +   +   MK D + P + T   L+  Y   G  +EA
Sbjct: 1020 SYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREA 1079

Query: 494  MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
              +    K + L+   + YS + DA  KNG      + L EM ++G+ P+   +   I A
Sbjct: 1080 ENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRA 1139



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 137/315 (43%), Gaps = 1/315 (0%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            ++    + G V     I+      GY   ++ + ++IS        ++   +   M+   
Sbjct: 856  LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAG 915

Query: 259  LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             KP+L   NA+++     G +F    +++  +L  G++PD  T+N+L+ +  R    E  
Sbjct: 916  FKPDLAILNALLNMYTAAG-NFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEG 974

Query: 319  RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
              L NEM  RG+   + +Y +LL A  K    + A +I  EM +K+   N   Y  M+  
Sbjct: 975  FTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKI 1034

Query: 379  YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
            Y  AG    A N+ + MK  GI     + + +++ Y   G+  EA  V   ++SS +   
Sbjct: 1035 YRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVS 1094

Query: 439  AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
             + Y+ +   Y K G Y+       +MK D V P+   ++  I   S      +A+ + +
Sbjct: 1095 TLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLK 1154

Query: 499  EFKQAGLKADVVLYS 513
              +  G    + L +
Sbjct: 1155 SLQDCGFDLPIRLLT 1169



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 123/251 (49%), Gaps = 34/251 (13%)

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE--AMQIFR 498
            +NA++G Y + G++D+ R++ + M    + P+L++++TLI+  SK G      A+ +  
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLF 282

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E +Q+GL+ DV+ Y+ LI A  ++  +E AV++ ++M     RP++ TYN+++   GR  
Sbjct: 283 EVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCG 342

Query: 559 TTE------------------CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
             E                   T + +     K+     ++  C Q    + +AG   N+
Sbjct: 343 KAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQ----LVKAGFKKNE 398

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           I   +  ++      G+ +          +G++ +M  +   P+ VT++ ++++  + N 
Sbjct: 399 I--TYNTMIHMYGKMGRLD--------LAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNR 448

Query: 661 FEDASMLLEEL 671
             +A  +LE++
Sbjct: 449 IAEAGKVLEDM 459


>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
 gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
          Length = 834

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 242/525 (46%), Gaps = 38/525 (7%)

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   D +TY T++  + +  Q     +++ +M      P VVTY+ +I  Y +A  L+DA
Sbjct: 333 GFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDA 392

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           + +F++M+  G   DRV+Y T++ I+AK G    A+ + + M+++G+  D  TY+ ++  
Sbjct: 393 VEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINC 452

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            GK G      ++F +M      PNL+TY+ +I + +K   Y+ A++++R+ + AG + D
Sbjct: 453 LGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPD 512

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            V YS +++ L  +G ++ A ++  EM ++   P+   Y  ++D +G++   E   +  +
Sbjct: 513 KVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQ 572

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
             L           +C            T N ++  F ++           NR       
Sbjct: 573 AMLHA--------GLCPNVP--------TCNSLLSAFLRV-----------NRLPDA--- 602

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
              + Q M  L + P++ T++ +L+ C+   S  D     E + +  +  +     L   
Sbjct: 603 -YNLLQSMLNLGLNPSLQTYTLLLSCCTEARSPYDMGCYCELMSVTGHPAHMFLSSLPSA 661

Query: 689 YRD--NIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWE 746
             D  N+        D +   D  +     +A+ D L   G K  A  V     +R V+ 
Sbjct: 662 GPDGQNVRHHVSKFLDMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEIAAQRNVYP 721

Query: 747 NVWSE--SC---LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKV 801
           +   E  SC   ++LH+MS G A   +   L      +     +P  + I+TGWG+ S+V
Sbjct: 722 DAVKEKSSCYWLINLHVMSEGTAVTALSRTLAWFRRQMLVSGVIPSRIDIVTGWGRRSRV 781

Query: 802 VGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRES 846
            G   +R+AV+ LL     PF+  N N G F+  G  ++ WL +S
Sbjct: 782 TGSSLVRQAVQELLHIFSFPFFTENGNTGCFVGCGEPLSRWLLQS 826



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 158/306 (51%), Gaps = 2/306 (0%)

Query: 247 AISVFNSMKRY-NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A+  F+ +K+    K +  TY  ++   G+    F  + ++ D M+R+G QP  +T+N L
Sbjct: 321 ALGFFHWLKQLPGFKHDGYTYTTMVGILGRAK-QFVAINKLLDQMVRDGCQPTVVTYNRL 379

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    R      A  +FN+M   G + D  TY TL+D   K   ++ A E+   M A  +
Sbjct: 380 IHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGL 439

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           SP+  TYS MI+   KAG L  A  +F EM   G   + V+YN ++++ AK   ++ AL 
Sbjct: 440 SPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALK 499

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + ++M+++G   D VTY+ ++   G  G  DE   +F +MK     P+   Y  L+D++ 
Sbjct: 500 LYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWG 559

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G  ++A + ++    AGL  +V   ++L+ A  +   +  A +LL  M   G+ P++ 
Sbjct: 560 KAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQ 619

Query: 546 TYNSII 551
           TY  ++
Sbjct: 620 TYTLLL 625



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/513 (24%), Positives = 216/513 (42%), Gaps = 69/513 (13%)

Query: 74  PNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHF--GRPKIAMSTRHSVVAEEALHH 131
           PN +P         S+    P    R + +FVS  H      +I    R    AEEAL +
Sbjct: 248 PNRRP---------SRDTKMPAVVARSARQFVSTGHVVENVSQILRQLRWGPSAEEALVN 298

Query: 132 VTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKND 191
           +     D      +LK+ +       D+T  L        W K +  F         K+D
Sbjct: 299 LNCHM-DAYQANQVLKQLQ-------DHTVALGFF----HWLKQLPGF---------KHD 337

Query: 192 QGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF 251
            G   + M+ ILGR  +      + +  + +G   TV  ++ LI +YGR+ Y  +A+ VF
Sbjct: 338 -GYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVF 396

Query: 252 NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
           N M++   +P+ VTY  +ID   K G      +E++  M   G+ PD  T++ ++    +
Sbjct: 397 NQMQKAGCEPDRVTYCTLIDIHAKAGF-LNFAMEMYQRMQAAGLSPDTFTYSVMINCLGK 455

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            G   AA  LF EM+ +G   ++ TYN ++    K      A ++  +M      P+ VT
Sbjct: 456 AGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVT 515

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           YS +++    +G LD+A  +FSEMK      D   Y  ++ ++ K G  E+A    + M 
Sbjct: 516 YSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAML 575

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG---- 487
            +G+  +  T N+LL  + +  +  +   + + M    ++P+L TY+ L+   ++     
Sbjct: 576 HAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLLSCCTEARSPY 635

Query: 488 --GLYKEAMQI--------FREFKQAGLKADVV---------------------LYSALI 516
             G Y E M +              AG     V                     L  A++
Sbjct: 636 DMGCYCELMSVTGHPAHMFLSSLPSAGPDGQNVRHHVSKFLDMMHSEDRESKRGLVDAVV 695

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
           D L K+GL E A S+ +   +  + P+ V   S
Sbjct: 696 DFLHKSGLKEEAGSVWEIAAQRNVYPDAVKEKS 728



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 128/263 (48%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G + D  T+ +++ +  R   + A   L ++MV  G    + TYN L+ +  +   ++ A
Sbjct: 333 GFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDA 392

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
            E+  +M      P+ VTY T+ID +AKAG L+ A+ M+  M+  G+  D  +Y+ +++ 
Sbjct: 393 VEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINC 452

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
             K G    A  +  EM   G   + VTYN ++    K   Y    +++  M+     P+
Sbjct: 453 LGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPD 512

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +TYS +++V    G   EA  IF E K+     D  +Y  L+D   K G VE A     
Sbjct: 513 KVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQ 572

Query: 534 EMTKEGIRPNVVTYNSIIDAFGR 556
            M   G+ PNV T NS++ AF R
Sbjct: 573 AMLHAGLCPNVPTCNSLLSAFLR 595


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 207/402 (51%), Gaps = 3/402 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT ++  L   G+  KA   F   + R    +      S++IS L +   +D A  +F  
Sbjct: 211 YTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVV--TYSSIISALSKTQAMDKATQVFTR 268

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +  G       +++L+  Y  SG  +EAI +F  M R+ ++P++VTY A++D   K G 
Sbjct: 269 MVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGK 328

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                 +IFD +++ G +PD  T+ +LL   +  G      +L + M+ +G+      +N
Sbjct: 329 S-TEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFN 387

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            ++ A  K  ++D A  + + M  + ++P++V Y T++D    AGR+DDAL+ F+ +K  
Sbjct: 388 MIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSE 447

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  + V + T++       ++++   +  EM   GI  D + +NA++G   K+G+  E 
Sbjct: 448 GLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEA 507

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
           + +F+ M    + PN  TY+TLID Y   G   EAM++       G+K   V Y+ +I+ 
Sbjct: 508 KNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIING 567

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
             +NG +E  ++LL EM  +G+ P +VTY  ++    ++  T
Sbjct: 568 YSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRT 609



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 171/328 (52%), Gaps = 3/328 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V A++ +I+   R G   +A S+F++M      P++VTY+++I A  K         ++F
Sbjct: 208 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQA-MDKATQVF 266

Query: 288 DDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             M++NGV PD I + SL+   CS G   EA   +F +M   G++ D+ TY  L+D +CK
Sbjct: 267 TRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAI-GIFKKMCRHGVEPDVVTYTALMDYLCK 325

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +   A +I   +  +   P+  TY T++ GYA  G L +  ++   M   G+ L    
Sbjct: 326 NGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHI 385

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +N ++  YAK  + +EALLV   M   G+  D V Y  +L      G+ D+    F  +K
Sbjct: 386 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 445

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           ++ ++PN++ ++TLI        + +  ++  E    G+  D + ++A++  LCK G V 
Sbjct: 446 SEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVI 505

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            A +L D M + GI PN  TYN++ID +
Sbjct: 506 EAKNLFDLMVRIGIEPNTNTYNTLIDGY 533



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 139/557 (24%), Positives = 233/557 (41%), Gaps = 115/557 (20%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR---YNLKPNLVTYNA 268
           A  +F+  L  G   +++  +  +S   R+     AIS+FN M R    +  PN+ TY  
Sbjct: 46  AHQVFDRLLKRGDRASIFDLNRALSDVARASPAV-AISLFNRMPRAGATSAAPNIATYGI 104

Query: 269 VIDAC---GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           VI  C   G+  + F  V  +    LR+  +P+ +  +S   +C+ GG       +   M
Sbjct: 105 VIGCCRRLGRLDLAFATVGRVITTGLRH--EPNPLQSSSQGPLCTAGGRAMRMDIVLRRM 162

Query: 326 VHRGIDQDIFTYNTLLDAIC------------------KG-------------------A 348
              G   D+F+Y  LL  +C                  KG                    
Sbjct: 163 PELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREG 222

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           Q+D A+ +   M  +  SP+VVTYS++I   +K   +D A  +F+ M   G+  D + Y 
Sbjct: 223 QLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYT 282

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           +++  Y   G+ +EA+ + K+M   G+  D VTY AL+    K GK  E R++F+ +   
Sbjct: 283 SLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKR 342

Query: 469 CVSPNLLTYSTLIDVYSKGG-----------LYKEAMQ---------------------- 495
              P+  TY TL+  Y+  G           + K+ MQ                      
Sbjct: 343 GHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEA 402

Query: 496 --IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             +F   +Q GL  D+V Y  ++D LC  G V+ A+S  + +  EG+ PN+V + ++I  
Sbjct: 403 LLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHG 462

Query: 554 FGRSATTECTVDDVER---------DLGKQKESANLDAMCSQDDKD--VQEAGRTDNQII 602
                   CT D  ++         D G   ++   +A+     K   V EA    + ++
Sbjct: 463 L-------CTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMV 515

Query: 603 KV--------FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
           ++        +  L+      GK +     E + +LGV   M    +KP+ VT++ I+N 
Sbjct: 516 RIGIEPNTNTYNTLIDGYCLDGKMD-----EAMKLLGV---MVFNGVKPSDVTYNTIING 567

Query: 655 CSRCNSFEDASMLLEEL 671
            S+    ED   LL E+
Sbjct: 568 YSQNGRIEDGLTLLREM 584



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 78/393 (19%), Positives = 145/393 (36%), Gaps = 101/393 (25%)

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP---AKNISPNVVTYST 374
           A  +F+ ++ RG    IF  N  L  + + A   +A  +   MP   A + +PN+ TY  
Sbjct: 46  AHQVFDRLLKRGDRASIFDLNRALSDVAR-ASPAVAISLFNRMPRAGATSAAPNIATYGI 104

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
                                              V+    +LGR + A      + ++G
Sbjct: 105 -----------------------------------VIGCCRRLGRLDLAFATVGRVITTG 129

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +R +                                 PN L  S+   + + GG      
Sbjct: 130 LRHE---------------------------------PNPLQSSSQGPLCTAGGRAMRMD 156

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK-EGIRP-NVVTYNSIID 552
            + R   + G K D+  Y+ L+  LC +   + A+ LL  M   +G  P +VV Y ++I+
Sbjct: 157 IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVIN 216

Query: 553 AFGRSATTE--CTVDDVERDLGKQKESANLDAMCSQDDKD--VQEAGRTDNQIIK----- 603
              R    +   ++ D   D G   +     ++ S   K   + +A +   +++K     
Sbjct: 217 GLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMP 276

Query: 604 ---VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
              ++  LV      GK +          +G+F+KM +  ++P+VVT++A+++   +   
Sbjct: 277 DCIMYTSLVHGYCSSGKPKE--------AIGIFKKMCRHGVEPDVVTYTALMDYLCKNGK 328

Query: 661 FEDASMLLEEL----RLFDNQVYGVAHGLLMGY 689
             +A  + + L       D+  YG    LL GY
Sbjct: 329 STEARKIFDSLVKRGHKPDSTTYGT---LLHGY 358


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 191/378 (50%), Gaps = 5/378 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+ L   G+V+ A +        G   TV+ F+A I A    G  ++A  +F  MK+
Sbjct: 302 STLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKK 361

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              KPN+ TY ++I     G    +  + +F  M R+GV P+ +T+N+L+ V       +
Sbjct: 362 KGCKPNVYTYTSLIS----GQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEID 417

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +A  +FN M   G   +  +YN L+   C     + A  ++  M     +P +VTY+ +I
Sbjct: 418 SALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIII 477

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            GY  +G  D A+ +   MK  G   D  SY  ++S + K+ + E A  +  EM   G+ 
Sbjct: 478 KGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLC 537

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + VTY AL+ GY K  K D   RM E+MK     PN+ TY+ LI   +K   +  A ++
Sbjct: 538 PNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 597

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +   +  +  DVV YS +I+ LC NG +  A+ + ++M K G  PN+ TY+S+I A G+
Sbjct: 598 CKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQ 657

Query: 557 SATTECTVDDVERDLGKQ 574
               E   +++  +L KQ
Sbjct: 658 EGRVE-EAEEMFSELKKQ 674



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 212/424 (50%), Gaps = 18/424 (4%)

Query: 137 RDDVSLGDILKKFEFKLC--GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK 194
           RD  S  +I  + + + C   A  Y+ L+  L N G  ++A+  F   + R       G 
Sbjct: 277 RDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALD-FISEMTR------HGV 329

Query: 195 LAS-----AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS 249
           L +     A I  L  +G+++ A  IF     +G    VY +++LIS    S   + AI 
Sbjct: 330 LPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVS---RMAIG 386

Query: 250 VFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC 309
           +F+ M R  + PN VTYNA+++   +  ++    + +F+ M ++G  P+  ++N L+   
Sbjct: 387 LFHRMSRDGVVPNTVTYNALMNVLMEN-MEIDSALIVFNMMGKHGCLPNTSSYNELIRGY 445

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
              G  E A ++   M+       + TYN ++   C     D+A  ++  M A    P+ 
Sbjct: 446 CTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDE 505

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
            +Y+ +I G+ K  +++ A  MF+EM   G+  + V+Y  ++S Y K  + + A  + + 
Sbjct: 506 WSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLER 565

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M+ SG R +  TYN L+ G  KQ  +     + + M  + +SP+++TYST+I+     G 
Sbjct: 566 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGA 625

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
              A+++F +  + G   ++  YS+LI AL + G VE A  +  E+ K+G+ P+ VTY  
Sbjct: 626 IPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVK 685

Query: 550 IIDA 553
           +I+ 
Sbjct: 686 MIEV 689



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 222/464 (47%), Gaps = 42/464 (9%)

Query: 201 SILGRLGKVDLAKNI---FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++L +L K+++   +   +   L EG    +  ++++I+A  + G  ++A S+ N + + 
Sbjct: 198 TLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKS 257

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
            +KP+  TY ++I    +   D     EIF+ M   G +P+  T+++L+  +C+ G + E
Sbjct: 258 GMKPDTFTYTSMILGYCRNR-DLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNE 316

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           A  +  +EM   G+   + T+   + A+C   +++ A++I  +M  K   PNV TY+++I
Sbjct: 317 AL-DFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLI 375

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G  +  R+  A+ +F  M   G+  + V+YN ++++  +    + AL+V   M   G  
Sbjct: 376 SG-QRVSRM--AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCL 432

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +  +YN L+ GY   G  ++   M   M     +P L+TY+ +I  Y   G    A+++
Sbjct: 433 PNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRV 492

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
               K  G + D   Y+ LI   CK   +E A  + +EM   G+ PN VTY ++I  + +
Sbjct: 493 LELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCK 552

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
               +C    +ER                     ++ +G   N  ++ +  L+    G  
Sbjct: 553 DEKLDCAARMLER---------------------MKRSGCRPN--VQTYNVLI---HGLT 586

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           K+ N    E LC     + M + KI P+VVT+S ++N    CN+
Sbjct: 587 KQNNFSGAEELC-----KVMLEEKISPDVVTYSTVINGL--CNN 623



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 207/446 (46%), Gaps = 38/446 (8%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +A++  +   +   K  L TY  ++    K  +    V++ +  +LR G+QP+ + +NS+
Sbjct: 176 QALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMT-STVMDRYHQILREGLQPNLLIYNSV 234

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    + G    A ++ N++   G+  D FTY +++   C+   +D AFEI   M  +  
Sbjct: 235 INALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGC 294

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            PN  TYST+I+G   +GR+++AL+  SEM   G+     ++   +     +GR E+A  
Sbjct: 295 EPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWK 354

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM----FEQMKADCVSPNLLTYSTLI 481
           +  +M+  G + +  TY +L+ G         V RM    F +M  D V PN +TY+ L+
Sbjct: 355 IFIDMKKKGCKPNVYTYTSLISG-------QRVSRMAIGLFHRMSRDGVVPNTVTYNALM 407

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           +V  +      A+ +F    + G   +   Y+ LI   C  G  E A+S+L  M K    
Sbjct: 408 NVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPT 467

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE--AGRTDN 599
           P +VTYN II  +  S  T+  +    R L   K +      C  D+    E  +G    
Sbjct: 468 PTLVTYNIIIKGYCDSGDTDVAI----RVLELMKANG-----CQPDEWSYTELISGFCKI 518

Query: 600 QIIKVFGQLVAEKAGQGKKENR----------CRQEIL-CILGVFQKMHKLKIKPNVVTF 648
             +++   +  E   +G   N           C+ E L C   + ++M +   +PNV T+
Sbjct: 519 SKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTY 578

Query: 649 SAILNACSRCNSFEDAS----MLLEE 670
           + +++  ++ N+F  A     ++LEE
Sbjct: 579 NVLIHGLTKQNNFSGAEELCKVMLEE 604



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/427 (24%), Positives = 174/427 (40%), Gaps = 60/427 (14%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A++++L    ++D A  +F      G      +++ LI  Y   G  ++A+S+  +M +
Sbjct: 404 NALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLK 463

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               P LVTYN +I   C  G  D    + + + M  NG QPD  ++  L++   +    
Sbjct: 464 GRPTPTLVTYNIIIKGYCDSGDTDV--AIRVLELMKANGCQPDEWSYTELISGFCKISKM 521

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  +FNEM+ RG+  +  TY  L+   CK  ++D A  ++  M      PNV TY+ +
Sbjct: 522 ELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVL 581

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G  K      A  +   M    I  D V+Y+TV++     G    AL +  +M   G 
Sbjct: 582 IHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGC 641

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +  TY++L+   G++G+ +E   MF ++K   + P+ +TY  +I+V    G    A  
Sbjct: 642 LPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFD 701

Query: 496 IFREFKQAG----------------------------------------LKADVV----- 510
              E   AG                                        +  DV+     
Sbjct: 702 FLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSS 761

Query: 511 ------------LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
                       LY AL+  L ++G    A +L   M  +   PN  TY   + +  R+ 
Sbjct: 762 KLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRAL 821

Query: 559 TTECTVD 565
             +  +D
Sbjct: 822 KVDLAMD 828



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/381 (22%), Positives = 166/381 (43%), Gaps = 25/381 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS   ++ K++LA  +F   ++ G       ++ALIS Y +      A  +   MKR
Sbjct: 509 TELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKR 568

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +PN+ TYN +I    K   +F    E+   ML   + PD +T+++++      G   
Sbjct: 569 SGCRPNVQTYNVLIHGLTKQN-NFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIP 627

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +FN+MV  G   ++ TY++L+ A+ +  +++ A E+ +E+  + + P+ VTY  MI
Sbjct: 628 LALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMI 687

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS------IYAKLGRFEEALLVCKEM 430
           +    +G++D A +   EM   G      +Y+ ++       +Y KL     A       
Sbjct: 688 EVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAAST-STF 746

Query: 431 ESSGIRKDAVT-----------------YNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           +   I KD ++                 Y+ALL    + G++ E   ++  M +    PN
Sbjct: 747 DDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPN 806

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
             TY   +    +      AM +F+       +  +  Y  LI  LC+    + A  + +
Sbjct: 807 QDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFE 866

Query: 534 EMTKEGIRPNVVTYNSIIDAF 554
           +M    +  + + +  +I+  
Sbjct: 867 KMLSRALNADEIVWTILINGL 887



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 144/340 (42%), Gaps = 31/340 (9%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L  +  +S A +     V  EE+ +      S +I+ L   G + LA  +F  
Sbjct: 578 YNVLIHGLTKQNNFSGAEE--LCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNK 635

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +  G    ++ +S+LI A G+ G  +EA  +F+ +K+  L P+ VTY  +I+ C   G 
Sbjct: 636 MVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSG- 694

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE--------AARNLFNEMVHRGI 330
                 +   +M+  G QP   T++ L+       ++         A+ + F++ +   I
Sbjct: 695 KVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQI---I 751

Query: 331 DQDIFT-----------------YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           ++D+ +                 Y+ LL  + +  +   A  +   M +++  PN  TY 
Sbjct: 752 NKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYK 811

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
             +    +A ++D A+++F  M      L    Y  ++    +L R +EA  V ++M S 
Sbjct: 812 HFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSR 871

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
            +  D + +  L+ G    G  D        M+ +  +P+
Sbjct: 872 ALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNPS 911


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 179/334 (53%), Gaps = 1/334 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G+   +  F++L++ Y      ++AI++F+ +     KPN+VTY  +I    K      H
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR-HLNH 206

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            VE+F+ M  NG +P+ +T+N+L+      G W  A  L  +M+ R I+ ++ T+  L+D
Sbjct: 207 AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A  K  ++  A E+   M   ++ P+V TY ++I+G    G LD+A  MF  M+  G   
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           + V Y T++  + K  R E+ + +  EM   G+  + +TY  L+ GY   G+ D  + +F
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            QM +    P++ TY+ L+D     G  ++A+ IF   ++  +  ++V Y+ +I  +CK 
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           G VE A  L   +  +G++PNV+TY ++I  F R
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 177/340 (52%), Gaps = 1/340 (0%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           +++ A  +F+  L  G+   V  ++ LI    ++ +   A+ +FN M     +PN+VTYN
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           A++    + G  +     +  DM++  ++P+ ITF +L+    + G    A+ L+N M+ 
Sbjct: 228 ALVTGLCEIG-RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
             +  D+FTY +L++ +C    +D A ++   M      PN V Y+T+I G+ K+ R++D
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
            + +F EM   G+  + ++Y  ++  Y  +GR + A  V  +M S     D  TYN LL 
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           G    GK ++   +FE M+   +  N++TY+ +I    K G  ++A  +F      G+K 
Sbjct: 407 GLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKP 466

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           +V+ Y+ +I   C+ GL+  A SL  +M ++G  PN   Y
Sbjct: 467 NVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 194/405 (47%), Gaps = 24/405 (5%)

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G   + F   +++F  M+ +   P  I F  LL+V ++   ++   +LF +M   GI   
Sbjct: 58  GLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPL 117

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           + T N ++  +C  +Q   A   + +M      P++VT++++++GY    R++DA+ +F 
Sbjct: 118 LCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFD 177

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           ++  +G   + V+Y T++    K      A+ +  +M ++G R + VTYNAL+ G  + G
Sbjct: 178 QILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIG 237

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           ++ +   +   M    + PN++T++ LID + K G   EA +++    Q  +  DV  Y 
Sbjct: 238 RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG 297

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           +LI+ LC  GL++ A  +   M + G  PN V Y ++I  F +S   E  +  +  ++ +
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM-KIFYEMSQ 356

Query: 574 QKESAN-------LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
           +   AN       +   C     DV +         +VF Q+ + +A    +      + 
Sbjct: 357 KGVVANTITYTVLIQGYCLVGRPDVAQ---------EVFNQMSSRRAPPDIRTYNVLLDG 407

Query: 627 LCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           LC  G       +F+ M K ++  N+VT++ I+    +    EDA
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDA 452



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 200/446 (44%), Gaps = 32/446 (7%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           ++  F+ L+S   +       IS+F  M+   + P L T N V+          +     
Sbjct: 82  SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC-F 140

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M++ G +PD +TF SLL         E A  LF++++  G   ++ TY TL+  +CK
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              ++ A E+  +M      PNVVTY+ ++ G  + GR  DA  +  +M    I  + ++
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +  ++  + K+G+  EA  +   M    +  D  TY +L+ G    G  DE R+MF  M+
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            +   PN + Y+TLI  + K    ++ M+IF E  Q G+ A+ + Y+ LI   C  G  +
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A  + ++M+     P++ TYN ++D    +              GK +++  +     +
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN--------------GKVEKALMIFEYMRK 426

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
            + D+          I  +  ++      GK E+           +F  +    +KPNV+
Sbjct: 427 REMDIN---------IVTYTIIIQGMCKLGKVEDA--------FDLFCSLFSKGMKPNVI 469

Query: 647 TFSAILNACSRCNSFEDASMLLEELR 672
           T++ +++   R     +A  L ++++
Sbjct: 470 TYTTMISGFCRRGLIHEADSLFKKMK 495



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 157/316 (49%), Gaps = 1/316 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L +   ++ A  +F      G    V  ++AL++     G   +A  +   M +
Sbjct: 192 TTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK 251

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++PN++T+ A+IDA  K G       E+++ M++  V PD  T+ SL+      GL +
Sbjct: 252 RRIEPNVITFTALIDAFVKVG-KLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD 310

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            AR +F  M   G   +   Y TL+   CK  +++   +I  EM  K +  N +TY+ +I
Sbjct: 311 EARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLI 370

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            GY   GR D A  +F++M       D  +YN +L      G+ E+AL++ + M    + 
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD 430

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + VTY  ++ G  K GK ++   +F  + +  + PN++TY+T+I  + + GL  EA  +
Sbjct: 431 INIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSL 490

Query: 497 FREFKQAGLKADVVLY 512
           F++ K+ G   +  +Y
Sbjct: 491 FKKMKEDGFLPNESVY 506



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 134/284 (47%), Gaps = 3/284 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   G W  A       +KR    N      +A+I    ++GK+  AK ++  
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT--FTALIDAFVKVGKLMEAKELYNV 283

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +       V+ + +LI+     G   EA  +F  M+R    PN V Y  +I    K   
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK- 342

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +  ++IF +M + GV  + IT+  L+      G  + A+ +FN+M  R    DI TYN
Sbjct: 343 RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYN 402

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            LLD +C   +++ A  I   M  + +  N+VTY+ +I G  K G+++DA ++F  +   
Sbjct: 403 VLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK 462

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G+  + ++Y T++S + + G   EA  + K+M+  G   +   Y
Sbjct: 463 GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 108/219 (49%)

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           +Y  +L       Q + A ++   M      P+++ ++ ++   AK  R D  +++F +M
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           + LGI     + N V+       +   A     +M   G   D VT+ +LL GY    + 
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           ++   +F+Q+      PN++TY+TLI    K      A+++F +    G + +VV Y+AL
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +  LC+ G    A  LL +M K  I PNV+T+ ++IDAF
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 107/267 (40%), Gaps = 51/267 (19%)

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           +F +AL +   M  S      + +  LL    K  +YD V  +FEQM+   + P L T +
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            ++           A     +  + G + D+V +++L++  C    +E A++L D++   
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
           G +PNVVTY ++I    ++                                      R  
Sbjct: 183 GFKPNVVTYTTLIRCLCKN--------------------------------------RHL 204

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAI 651
           N  +++F Q+    +             LC +G       + + M K +I+PNV+TF+A+
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264

Query: 652 LNACSRCNSFEDASMLLEELRLFDNQV 678
           ++A      F     L+E   L++  +
Sbjct: 265 IDA------FVKVGKLMEAKELYNVMI 285



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 33/148 (22%)

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV 681
           CR    C LG   KM KL  +P++VTF+++LN     N  EDA      + LFD Q+ G 
Sbjct: 135 CRAS--CFLG---KMMKLGFEPDLVTFTSLLNGYCHWNRIEDA------IALFD-QILG- 181

Query: 682 AHGLLMGYRDNIWV---------------QALSLFDEVKLMDSSTASAFYNALTDMLWHF 726
                MG++ N+                  A+ LF+++    S      YNAL   L   
Sbjct: 182 -----MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEI 236

Query: 727 GQKRGAQLVVLEGKRRQVWENVWSESCL 754
           G+   A  ++ +  +R++  NV + + L
Sbjct: 237 GRWGDAAWLLRDMMKRRIEPNVITFTAL 264


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 183/333 (54%), Gaps = 1/333 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           ++++ +I+   ++G   +A+ +F+ M    + PN +TYN +ID   K G D +    ++ 
Sbjct: 189 FSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKG-DLESGFRLWS 247

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            MLR+G++P+ IT+N LL+   R G       + +EM  R +  D FTY+ L D   +  
Sbjct: 248 QMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTG 307

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
                  +  E   K +     T S +++G  K G++  A  +   +   G+    V YN
Sbjct: 308 DSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYN 367

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+++ Y ++G  E A  + ++M+S  IR D +TYNAL+ G GK  +  E   +  +M+ +
Sbjct: 368 TLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKN 427

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V+P++ T++TLID Y + G  ++   I  + ++ GLK +VV Y ++++A CKNG +  A
Sbjct: 428 GVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEA 487

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           V++LD+M  + + P    YN+IIDA+    +T+
Sbjct: 488 VAILDDMFIKDVLPGAQVYNAIIDAYIECGSTD 520



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 205/415 (49%), Gaps = 38/415 (9%)

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           PN  +YN VI    K G D    V++FD+M    V P+ IT+N+++    + G  E+   
Sbjct: 186 PNAFSYNVVIAGLWKAGTDC-DAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFR 244

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L+++M+  G+  ++ TYN LL  +C+  +M     ++ EM ++ + P+  TYS + DG++
Sbjct: 245 LWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHS 304

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           + G     L++F E    G+ +   + + +L+   K G+  +A  V + + +SG+ +  V
Sbjct: 305 RTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTV 364

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
            YN L+ GY + G  +    +F+QMK+  + P+ +TY+ LI+   K     EA  +  E 
Sbjct: 365 IYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEM 424

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           ++ G+   V  ++ LIDA  + G +E    +L +M ++G++PNVV+Y SI++AF ++   
Sbjct: 425 EKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKI 484

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDD---KDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
                              L+A+   DD   KDV    +  N II  + +  +       
Sbjct: 485 -------------------LEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQA--- 522

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                         + +KM    + P++VT++ ++    + +   +A  LL+ LR
Sbjct: 523 ------------FMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLR 565



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 190/377 (50%), Gaps = 10/377 (2%)

Query: 202 ILGRLGKVDLAKN--IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I G + K DL     ++   L  G    V  ++ L+S   R+G   E  +V + M    +
Sbjct: 230 IDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKM 289

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            P+  TY+ + D   + G D + ++ +F++ ++ GV+    T + LL    + G    A 
Sbjct: 290 VPDGFTYSILFDGHSRTG-DSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAE 348

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            +   +V+ G+ Q    YNTL++  C+   ++ AF I  +M ++ I P+ +TY+ +I+G 
Sbjct: 349 EVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGL 408

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K  R+ +A ++  EM+  G+     ++NT++  Y + G+ E+  ++  +M+  G++ + 
Sbjct: 409 GKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNV 468

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           V+Y +++  + K GK  E   + + M    V P    Y+ +ID Y + G   +A  +  +
Sbjct: 469 VSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEK 528

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
            K +G+   +V Y+ LI  LCK   +  A  LLD +   G+ P+V++YN++I A      
Sbjct: 529 MKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISAC----- 583

Query: 560 TECTVDDVERDLGKQKE 576
             C   + +R L  +KE
Sbjct: 584 --CYRSNTDRALELEKE 598



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 182/359 (50%), Gaps = 1/359 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S L R G++     + +   +       + +S L   + R+G  Q  +S+F    +
Sbjct: 262 NVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVK 321

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +K    T + +++   K G       E+   ++ +G+    + +N+L+    + G  E
Sbjct: 322 KGVKIGAYTCSILLNGLCKDG-KISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLE 380

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A ++F +M  R I  D  TYN L++ + K  ++  A +++ EM    ++P+V T++T+I
Sbjct: 381 GAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLI 440

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y +AG+L+    + S+M+  G+  + VSY ++++ + K G+  EA+ +  +M    + 
Sbjct: 441 DAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVL 500

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             A  YNA++  Y + G  D+   + E+MK+  V P+++TY+ LI    K     EA ++
Sbjct: 501 PGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEEL 560

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
               +  GL  DV+ Y+ LI A C     + A+ L  EM K GI+P+  TY  +  + G
Sbjct: 561 LDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLG 619



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 197/419 (47%), Gaps = 43/419 (10%)

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV-QPDRITFNSLLAVCSRGGLWEA- 317
           +P+  T+N  + AC   G D    V +   M  +G   P+  ++N ++A     GLW+A 
Sbjct: 149 RPDTFTWNKAVQACVVAG-DLDEAVGMLRRMGCDGAPAPNAFSYNVVIA-----GLWKAG 202

Query: 318 ----ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
               A  LF+EM  + +  +  TYNT++D   K   ++  F + ++M    + PNV+TY+
Sbjct: 203 TDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYN 262

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            ++ G  +AGR+ +   +  EM    +  D  +Y+ +   +++ G  +  L + +E    
Sbjct: 263 VLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKK 322

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G++  A T + LL G  K GK  +   + + +    +    + Y+TLI+ Y + G  + A
Sbjct: 323 GVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGA 382

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             IF++ K   ++ D + Y+ALI+ L K   +  A  L+ EM K G+ P+V T+N++IDA
Sbjct: 383 FSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDA 442

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
           +GR+   E                      C     D+QE G   N +   +G +V    
Sbjct: 443 YGRAGQLE---------------------KCFIILSDMQEKGLKPNVV--SYGSIVNAFC 479

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             GK        IL  + +   M    + P    ++AI++A   C S + A ML E+++
Sbjct: 480 KNGK--------ILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMK 530



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 187/398 (46%), Gaps = 36/398 (9%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ-DIFTYNTLLDAIC 345
           F+ ++    +PD  T+N  +  C   G  + A  +   M   G    + F+YN ++  + 
Sbjct: 140 FELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLW 199

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K      A ++  EMP K + PN +TY+TMIDG+ K G L+    ++S+M   G+  + +
Sbjct: 200 KAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVI 259

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +YN +LS   + GR  E   V  EM S  +  D  TY+ L  G+ + G    +  +FE+ 
Sbjct: 260 TYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEES 319

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
               V     T S L++   K G   +A ++ +    +GL    V+Y+ LI+  C+ G +
Sbjct: 320 VKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDL 379

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           E A S+  +M    IRP+ +TYN++I+  G+          VER           D +  
Sbjct: 380 EGAFSIFQQMKSRLIRPDHITYNALINGLGK----------VERITEAH------DLVIE 423

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
            +   V  +  T N +I  +G     +AGQ +K         C + +   M +  +KPNV
Sbjct: 424 MEKNGVNPSVETFNTLIDAYG-----RAGQLEK---------CFI-ILSDMQEKGLKPNV 468

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRLFD----NQVY 679
           V++ +I+NA  +     +A  +L+++ + D     QVY
Sbjct: 469 VSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVY 506



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 185/389 (47%), Gaps = 17/389 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L       G+    +  F  +VK+  +        S +++ L + GK+  A+ + +T
Sbjct: 296 YSILFDGHSRTGDSQTMLSLFEESVKKGVKIG--AYTCSILLNGLCKDGKISKAEEVLQT 353

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +N G   T   ++ LI+ Y + G  + A S+F  MK   ++P+ +TYNA+I+  GK   
Sbjct: 354 LVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGK--- 410

Query: 279 DFKHVVEIFD---DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
             + + E  D   +M +NGV P   TFN+L+    R G  E    + ++M  +G+  ++ 
Sbjct: 411 -VERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVV 469

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           +Y ++++A CK  ++  A  I+ +M  K++ P    Y+ +ID Y + G  D A  +  +M
Sbjct: 470 SYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKM 529

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           K  G+    V+YN ++    K  +  EA  +   + + G+  D ++YN L+     +   
Sbjct: 530 KSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNT 589

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV----L 511
           D    + ++M    + P+  TY  L       G   E   ++++     L  DVV    +
Sbjct: 590 DRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQM----LDKDVVPCSGI 645

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGI 540
           Y+ ++DA  K G      +L  EM+ +GI
Sbjct: 646 YNIMVDAYAKCGEESKVEALRKEMSDKGI 674



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 113/277 (40%), Gaps = 73/277 (26%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+ LG++ ++  A ++       G   +V  F+ LI AYGR+G  ++   + + M+ 
Sbjct: 402 NALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQE 461

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML------------------------- 291
             LKPN+V+Y ++++A  K G      V I DDM                          
Sbjct: 462 KGLKPNVVSYGSIVNAFCKNG-KILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTD 520

Query: 292 ----------RNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
                      +GV P  +T+N L+  +C +  + EA   L + + + G+  D+ +YNTL
Sbjct: 521 QAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEA-EELLDSLRNYGLAPDVISYNTL 579

Query: 341 LDAICKGAQMDLAFEIMAEM------PA-----------------------------KNI 365
           + A C  +  D A E+  EM      P+                             K++
Sbjct: 580 ISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDV 639

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            P    Y+ M+D YAK G       +  EM   GI +
Sbjct: 640 VPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAV 676



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 5/185 (2%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           ++ +A+I      G  D A  + E   + G   ++  ++ LI    +     EA  + +S
Sbjct: 504 QVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDS 563

Query: 254 MKRYNLKPNLVTYNAVIDACG-KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           ++ Y L P++++YN +I AC  +   D    +E+  +M + G++P   T+  L +     
Sbjct: 564 LRNYGLAPDVISYNTLISACCYRSNTD--RALELEKEMWKCGIKPSPRTYRMLFSSLGGA 621

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G      NL+ +M+ + +      YN ++DA  K  +      +  EM  K I+  V  Y
Sbjct: 622 GRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIA--VGDY 679

Query: 373 STMID 377
           ++M +
Sbjct: 680 TSMTN 684


>gi|168054024|ref|XP_001779433.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669118|gb|EDQ55711.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 570

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 149/574 (25%), Positives = 263/574 (45%), Gaps = 77/574 (13%)

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           T+N +L V  RG  WE ++ +  +M +  +  D  TY+TL+    +    D A      M
Sbjct: 45  TYNVMLKVLRRGRQWEFSQQIAEDMANADVRPDNITYSTLISCANRCNYQDAAMAWFDRM 104

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
                 P+VVTYSTMID Y K G+ D+A+ ++  +K  G   D+V+Y T++ ++ + G  
Sbjct: 105 HEAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVKQAGWKPDKVTYGTMVRLFGRAGYI 164

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
             A+ + +EM+ SG++ DA+ YN ++   G+ G+     ++FE+M+ + V PN +T ST+
Sbjct: 165 RAAVSIFEEMKGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEMEREGVKPNAVTLSTV 224

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           ++ YS+ G   E +++F+  +Q G+  DV++Y+A++    + GL   A   L EMT+ G 
Sbjct: 225 METYSRCGNVMEGLEVFQRLRQ-GVACDVIVYNAVLKMCREAGLASEAEQYLREMTESGH 283

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
           +PN  TY ++I  + +                                    EA RT +Q
Sbjct: 284 QPNDWTYRNMISVYAKKGMA-------------------------------VEAHRTFSQ 312

Query: 601 IIKVFGQL-------VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
           +++   Q+       + +  G  K+ N+  QEIL       +M  +   P+      ILN
Sbjct: 313 MVEAGYQIDVMAYTSLLQAYGNAKEYNKV-QEIL------DEMTSVNCAPDERLCCVILN 365

Query: 654 ACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQAL-----SLFDEVKLMD 708
               C++ E+  +L   LR+  + +  +   +   + +N+ ++ L     SL  ++    
Sbjct: 366 LLDSCDTDEELGILRSCLRMCSSTMDTIVGQI---FEENLVLRELRGELQSLLSDIT--- 419

Query: 709 SSTASAFYNALTDMLWHFGQKRGA-QLVV----------LEGKRRQVWENVWSESCLDLH 757
                   N+L  + WH G +  + QL+           L+ K   +W        L L 
Sbjct: 420 EEAHKPICNSLMQLSWHKGDRNHSFQLLSLFRVLGVYTGLQTKSPTMWS-------LHLR 472

Query: 758 LMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTG 817
            +S+GAA   + +WL ++   + EG ELP  + I TG G       +  L   +  LL  
Sbjct: 473 SLSTGAAHCALLSWLSSVRYAIKEGQELPGRIIIETGVGNQLN-ADEFRLIVVISSLLKE 531

Query: 818 MGAPFWVANCNLGRFISTGPMVASWLRESGTLKV 851
             +PF           ++G  V  WL ES +L +
Sbjct: 532 CSSPFKECADRKDWLEASGVDVTQWL-ESTSLDL 564



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 158/296 (53%), Gaps = 2/296 (0%)

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           N+ TYN ++    +G   ++   +I +DM    V+PD IT+++L++  +R    +AA   
Sbjct: 42  NIYTYNVMLKVLRRGR-QWEFSQQIAEDMANADVRPDNITYSTLISCANRCNYQDAAMAW 100

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F+ M   G   D+ TY+T++D   K  + D A  +   +      P+ VTY TM+  + +
Sbjct: 101 FDRMHEAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVKQAGWKPDKVTYGTMVRLFGR 160

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           AG +  A+++F EMK  G+  D + YN +++   + GR   AL V +EME  G++ +AVT
Sbjct: 161 AGYIRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEMEREGVKPNAVT 220

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
            + ++  Y + G   E   +F++++   V+ +++ Y+ ++ +  + GL  EA Q  RE  
Sbjct: 221 LSTVMETYSRCGNVMEGLEVFQRLRQG-VACDVIVYNAVLKMCREAGLASEAEQYLREMT 279

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           ++G + +   Y  +I    K G+   A     +M + G + +V+ Y S++ A+G +
Sbjct: 280 ESGHQPNDWTYRNMISVYAKKGMAVEAHRTFSQMVEAGYQIDVMAYTSLLQAYGNA 335



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 140/323 (43%), Gaps = 37/323 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +IS   R    D A   F+     G    V  +S +I  YG+ G   EAI+++  +K+
Sbjct: 82  STLISCANRCNYQDAAMAWFDRMHEAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVKQ 141

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              KP+ VTY  ++   G+ G   +  V IF++M  +GVQPD I +N ++A   R G   
Sbjct: 142 AGWKPDKVTYGTMVRLFGRAGY-IRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRAGRMG 200

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +F EM   G                                   + PN VT ST++
Sbjct: 201 HALKVFEEMEREG-----------------------------------VKPNAVTLSTVM 225

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           + Y++ G + + L +F  ++  G+  D + YN VL +  + G   EA    +EM  SG +
Sbjct: 226 ETYSRCGNVMEGLEVFQRLR-QGVACDVIVYNAVLKMCREAGLASEAEQYLREMTESGHQ 284

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +  TY  ++  Y K+G   E  R F QM       +++ Y++L+  Y     Y +  +I
Sbjct: 285 PNDWTYRNMISVYAKKGMAVEAHRTFSQMVEAGYQIDVMAYTSLLQAYGNAKEYNKVQEI 344

Query: 497 FREFKQAGLKADVVLYSALIDAL 519
             E        D  L   +++ L
Sbjct: 345 LDEMTSVNCAPDERLCCVILNLL 367


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 176/329 (53%), Gaps = 7/329 (2%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKR--YNLKPNLVTYNAVIDA-CGKGGVDFKHVV 284
           V   + ++    +SG  QEA++         +   PN VTYN +IDA C  G +   +  
Sbjct: 209 VVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAY-- 266

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE--MVHRGIDQDIFTYNTLLD 342
           E+ + M   GV  + +T N+++    R G   AA   F E   V      +  TY+TL+ 
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVG 326

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A+     + +A E+  E  ++  SP+ + Y TMI G  +AGRL+DA +M S MK  G  L
Sbjct: 327 ALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKL 386

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D  +YN +++ + +  R  EA  + +EM+  GIR D  TYN LL G  K G +  V  + 
Sbjct: 387 DTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELL 446

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +M  D   P+++T+ TL+  Y K G   EA++I R   ++G+  + V+Y+ LID LCK 
Sbjct: 447 GKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKR 506

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           G V+ A+ L DEM ++ +  NV T+N+++
Sbjct: 507 GDVDLAIELFDEMKEKSVPANVTTFNALL 535



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 183/379 (48%), Gaps = 13/379 (3%)

Query: 198 AMISILGRLGKV-DLAKNIFETALNEGYGNT---VYAFSALISAYGRSGYCQEAISVFNS 253
           A  SIL  L +V D+       AL +G  +    V  +  L++   ++G   +A+ V + 
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDG 197

Query: 254 MKRYNL--KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLR-NGVQPDRITFNSLLAVCS 310
           M R +L  +P++VT N V+D   K G   + +  +   M   +G  P+ +T+N L+    
Sbjct: 198 MSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC 257

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP--- 367
           R G    A  L  +M + G+ Q+I T NT++  +C+  +   A E   E   + + P   
Sbjct: 258 RVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGK 315

Query: 368 -NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
            N VTYST++        +  A+ +F E    G   D + Y T++S   + GR E+A  +
Sbjct: 316 GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSM 375

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
              M+ +G + D   YN L+ G+ ++ +  E   + ++MK   + P++ TY+TL+    K
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCK 435

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G +    ++  +    G +  V+ +  L+   CK G ++ A+ +L  M + GI PN V 
Sbjct: 436 AGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVI 495

Query: 547 YNSIIDAFGRSATTECTVD 565
           YN++ID   +    +  ++
Sbjct: 496 YNTLIDFLCKRGDVDLAIE 514



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 155/325 (47%), Gaps = 3/325 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    R+G + +A  + E   NEG    +   + ++    R+G    A+  F   + 
Sbjct: 250 NCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRT 309

Query: 257 Y--NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
                K N VTY+ ++ A      +    +E+F + +  G  PD I + ++++  ++ G 
Sbjct: 310 VWPEGKGNAVTYSTLVGALLHTN-NVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGR 368

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E A ++ + M   G   D   YN L+   C+  ++  A+E++ EM    I P+V TY+T
Sbjct: 369 LEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNT 428

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++ G  KAG       +  +M   G     +++ T++  Y K+G+ +EAL + + M+ SG
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I  + V YN L+    K+G  D    +F++MK   V  N+ T++ L+       + ++A 
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAF 548

Query: 495 QIFREFKQAGLKADVVLYSALIDAL 519
           ++  + ++     D V    L++ L
Sbjct: 549 ELMDQMREERCFPDYVTVDVLMEWL 573



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 3/269 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++  L     V +A  +F   ++EG+      +  +IS   ++G  ++A S+ +SMK 
Sbjct: 322 STLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKE 381

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              K +   YN +I   C K         E+  +M   G++PD  T+N+LL+   + G +
Sbjct: 382 AGFKLDTKAYNILIAGFCRKK--RLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            A   L  +M+  G    + T+ TL+   CK  ++D A  I+  M    I PN V Y+T+
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID   K G +D A+ +F EMK   +  +  ++N +L         E+A  +  +M     
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERC 559

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
             D VT + L+      G+ D ++R  +Q
Sbjct: 560 FPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 193/433 (44%), Gaps = 44/433 (10%)

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPA-KNISPNVVTYSTMIDGYAKAGRLDDALNM 391
           D+F +N++L A+ +   +     I A M    ++ P+VVTY  +++G  KAGR+ DAL +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 392 FSEM--KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS--GIRKDAVTYNALLG 447
              M  + L I  D V+ NTV+    K GR +EAL   ++  SS  G   + VTYN L+ 
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL-- 505
            + + G       + E+M+ + V  N++T +T++    + G    A++ FRE +      
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           K + V YS L+ AL     V  A+ L  E   EG  P+ + Y ++I              
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGL----------- 363

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQEAG-RTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                     ++  L+  CS     ++EAG + D    K +  L+A           CR+
Sbjct: 364 ---------TQAGRLEDACSMASS-MKEAGFKLDT---KAYNILIA---------GFCRK 401

Query: 625 EILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH 683
           + L     + Q+M ++ I+P+V T++ +L+   +   F     LL ++     Q   +  
Sbjct: 402 KRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITF 461

Query: 684 GLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKR 741
           G L+ GY +     +AL +   +        +  YN L D L   G    A  +  E K 
Sbjct: 462 GTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKE 521

Query: 742 RQVWENVWSESCL 754
           + V  NV + + L
Sbjct: 522 KSVPANVTTFNAL 534



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 3/217 (1%)

Query: 181 FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           F  K  E  +    +   MIS L + G+++ A ++  +    G+     A++ LI+ + R
Sbjct: 341 FHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCR 400

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
                EA  +   MK   ++P++ TYN ++    K G DF  V E+   M+ +G QP  I
Sbjct: 401 KKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAG-DFAAVDELLGKMIDDGCQPSVI 459

Query: 301 TFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           TF +L+   C  G + EA R +   M   GI  +   YNTL+D +CK   +DLA E+  E
Sbjct: 460 TFGTLVHGYCKVGKIDEALR-ILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDE 518

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           M  K++  NV T++ ++ G       + A  +  +M+
Sbjct: 519 MKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMR 555


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  189 bits (479), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 173/305 (56%), Gaps = 9/305 (2%)

Query: 252 NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
           +S+   N KP +++Y+ +IDA  K   +     ++F++M   G+ P  I++ SL+     
Sbjct: 231 SSLYGINFKPVVISYSIIIDALCKDRRE-DEARDLFEEMKVQGMTPTVISYTSLM----- 284

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
              WE A+ LFNEMV++G+  ++ T+N L+D +CK  ++  A +++  M  + I PN++T
Sbjct: 285 ---WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLT 341

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+++I+G+   G L+ A  +F  M   G   D + Y  +++ Y K  + EEA+ +   M 
Sbjct: 342 YNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGML 401

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G R D  TY ALL G  + GK  + +++F  MK   +  +L  Y   ++   K G   
Sbjct: 402 QVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLF 461

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EAM++F + K   +K D+  ++ LID LCK G +E+A  L +++ +E ++P+VVTYN +I
Sbjct: 462 EAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 521

Query: 552 DAFGR 556
             F R
Sbjct: 522 HEFCR 526



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 207/423 (48%), Gaps = 21/423 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L++ L      SKA   F    K     N        ++  L R G + +A  + + 
Sbjct: 169 YTTLIKGLCMEHRISKAALLFTRMQKLGCTPN--AITYGTLMKGLCRTGNISIALKLHQE 226

Query: 219 ALNEG--YG----NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
            LN+   YG      V ++S +I A  +     EA  +F  MK   + P +++Y +++  
Sbjct: 227 MLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM-- 284

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
                  ++    +F++M+  GVQP+ +TFN L+ V  + G    A++L   M+ RGI  
Sbjct: 285 -------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVP 337

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           ++ TYN+L++  C    ++ A E+   MP+K   P+V+ Y+ +I+GY K  ++++A+ ++
Sbjct: 338 NLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLY 397

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           + M  +G   D  +Y  +L+   + G+  +A  +   M+  GI  D   Y   L G  K 
Sbjct: 398 NGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKN 457

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G   E   +F ++K+  +  ++  ++ LID   K G  + A ++F +  Q  L+ DVV Y
Sbjct: 458 GCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTY 517

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD----DVE 568
           + +I   C+ G V  A  L  +M K G  P+ +TY ++I  F  S   E  V+     V+
Sbjct: 518 NIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 577

Query: 569 RDL 571
           RD+
Sbjct: 578 RDV 580



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 221/469 (47%), Gaps = 51/469 (10%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           +F+ L+S   +  +  +   ++N M+   + P+  T N +++  C    V     + +  
Sbjct: 98  SFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVG--EGLAVMA 155

Query: 289 DMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            +LR G  PD +T+ +L+  +C    + +AA  LF  M   G   +  TY TL+  +C+ 
Sbjct: 156 GILRRGYIPDIVTYTTLIKGLCMEHRISKAAL-LFTRMQKLGCTPNAITYGTLMKGLCRT 214

Query: 348 AQMDLAFEIMAEMP------AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             + +A ++  EM         N  P V++YS +ID   K  R D+A ++F EMK  G+ 
Sbjct: 215 GNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMT 274

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
              +SY +++        +EEA  +  EM + G++ + VT+N L+    K+GK  E + +
Sbjct: 275 PTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDL 326

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            E M    + PNLLTY++LI+ +   G    A ++F      G + DV+ Y+ LI+  CK
Sbjct: 327 LEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCK 386

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK------ 575
              VE A+ L + M + G RP+V TY +++    +       V D ++  G  K      
Sbjct: 387 TSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK----VGDAKKLFGVMKVYGIPG 442

Query: 576 ----ESANLDAMCSQDDKDVQEAGRTDNQI--------IKVFGQLVAEKAGQGKKENRCR 623
                   L+ +C   +  + EA    N++        I+ F  L+      GK E    
Sbjct: 443 DLYIYGIFLNGLCK--NGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWE 500

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                   +F+K+ + +++P+VVT++ +++   R      A++L +++ 
Sbjct: 501 --------LFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKME 541



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 184/350 (52%), Gaps = 13/350 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L +  + D A+++FE    +G   TV ++++L+         +EA  +FN M  
Sbjct: 246 SIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLFNEMVN 297

Query: 257 YNLKPNLVTYNAVIDACGKGG--VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
             ++PN+VT+N +ID   K G  ++ K ++E+   M++ G+ P+ +T+NSL+      G 
Sbjct: 298 QGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEV---MIQRGIVPNLLTYNSLIEGFCLVGD 354

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             +AR LF  M  +G + D+  Y  L++  CK ++++ A ++   M      P+V TY  
Sbjct: 355 LNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGA 414

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++ G  + G++ DA  +F  MK  GI  D   Y   L+   K G   EA+ +  +++S  
Sbjct: 415 LLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYN 474

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I+ D   +N L+ G  K GK +    +FE++  + + P+++TY+ +I  + +GG   +A 
Sbjct: 475 IKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKAN 534

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            +F++ ++ G   D + Y+ LI    ++  +E  V LL  M +  +  +V
Sbjct: 535 ILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 220/473 (46%), Gaps = 57/473 (12%)

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C  G +      + F  M+ +   P   +F  LL+  ++   +     L+N+M   GI  
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D  T N LL+ +C   ++     +MA +  +   P++VTY+T+I G     R+  A  +F
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM--ESS--GI--RKDAVTYNALL 446
           + M+ LG   + ++Y T++    + G    AL + +EM  +SS  GI  +   ++Y+ ++
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
               K  + DE R +FE+MK   ++P +++Y++L        +++EA ++F E    G++
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSL--------MWEEAKRLFNEMVNQGVQ 301

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            +VV ++ LID LCK G V  A  LL+ M + GI PN++TYNS+I+ F       C V D
Sbjct: 302 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGF-------CLVGD 354

Query: 567 VE--RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
           +   R+L     S      C  D              +  +  L+       K E     
Sbjct: 355 LNSARELFVSMPSKG----CEPD--------------VICYTVLINGYCKTSKVEEA--- 393

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYG 680
                + ++  M ++  +P+V T+ A+L    +     DA  L   ++++    D  +YG
Sbjct: 394 -----MKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYG 448

Query: 681 V-AHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
           +  +GL    ++    +A+ LF+++K  +       +N L D L   G+   A
Sbjct: 449 IFLNGLC---KNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETA 498



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 105/211 (49%), Gaps = 3/211 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+       +  +A++ +   ++  +R +   K   A+++ L + GKV  AK +F  
Sbjct: 377 YTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDV--KTYGALLTGLFQGGKVGDAKKLFGV 434

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G    +Y +   ++   ++G   EA+ +FN +K YN+K ++  +N +ID   K G 
Sbjct: 435 MKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAG- 493

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +   E+F+ + +  +QPD +T+N ++    RGG    A  LF +M   G   D  TY 
Sbjct: 494 KLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYA 553

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
           TL+    +  +++   E++  M  +++S +V
Sbjct: 554 TLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 192/362 (53%), Gaps = 4/362 (1%)

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNT-VYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           I G     +L K +    + E YG+  VY+++A+IS + ++     A  VF+ M+     
Sbjct: 104 IKGFFNSRNLKKAMRVMEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFS 163

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           P++VTYN +I + C +G ++     E+ D++L++G +P  IT+  L+      G    A 
Sbjct: 164 PDVVTYNIMIGSLCSRGKLEL--AFEVMDELLKDGCKPSVITYTILIEATILEGRINEAL 221

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            LF+E+V RG+  D++TYN ++  ICK    D A + +  + A+  +P+VV+Y+ ++  +
Sbjct: 222 ELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSF 281

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
               R +D   +  +M   G   + V+++ ++S + + GR  EA+ V + M+  G+  D+
Sbjct: 282 LNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDS 341

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
            +Y+ L+  + K+G+ D      E+M +D   P+++ Y+T++    K G    A+ +F +
Sbjct: 342 YSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEK 401

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             + G    V  Y+ +  AL   G    A+ ++ EM ++GI P+ +TYNS+I    R   
Sbjct: 402 LDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGL 461

Query: 560 TE 561
            +
Sbjct: 462 VD 463



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 178/338 (52%), Gaps = 6/338 (1%)

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD--DML 291
           L++   R+G   E++    S+     KP++V    +I    KG  + +++ +     ++L
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLI----KGFFNSRNLKKAMRVMEIL 123

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
                PD  ++N++++  S+    ++A  +F+ M  RG   D+ TYN ++ ++C   +++
Sbjct: 124 ETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLE 183

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
           LAFE+M E+      P+V+TY+ +I+     GR+++AL +F E+   G+  D  +YN ++
Sbjct: 184 LAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAII 243

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
               K G  + AL   + + + G   D V+YN LL  +  + ++++  R+ + M      
Sbjct: 244 RGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCE 303

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           PN++T+S LI  + + G  +EA+ +    K+ GL  D   Y  LI A CK G ++ A+  
Sbjct: 304 PNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEY 363

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           L++M  +G  P++V YN+I+    +    +  +D  E+
Sbjct: 364 LEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEK 401



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 172/357 (48%), Gaps = 1/357 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI  L   GK++LA  + +  L +G   +V  ++ LI A    G   EA+ +F+ +    
Sbjct: 172 MIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRG 231

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           L+P+L TYNA+I    K G++    ++    +   G  PD +++N LL        WE  
Sbjct: 232 LRPDLYTYNAIIRGICKEGME-DRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDG 290

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L  +MV  G + ++ T++ L+ + C+  ++  A  ++  M  K ++P+  +Y  +I  
Sbjct: 291 ERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISA 350

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           + K GRLD A+    +M   G   D V+YNT+L+   K G  + AL V ++++  G    
Sbjct: 351 FCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPT 410

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
              YN +       G   +   M  +M    + P+ +TY++LI    + GL  EA+ +  
Sbjct: 411 VRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLV 470

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           + +    +  V+ ++ ++  +CK   V   + LL  M ++G  PN  +Y  +I+   
Sbjct: 471 DMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIA 527



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/388 (23%), Positives = 181/388 (46%), Gaps = 35/388 (9%)

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
            + ++  G +PD +    L+    +   L +A R +  E++    D D+++YN ++    
Sbjct: 85  LESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM--EILETYGDPDVYSYNAMISGFS 142

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  Q+D A ++   M ++  SP+VVTY+ MI      G+L+ A  +  E+   G     +
Sbjct: 143 KANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVI 202

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y  ++      GR  EAL +  E+ S G+R D  TYNA++ G  K+G  D        +
Sbjct: 203 TYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHL 262

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
            A   +P++++Y+ L+  +     +++  ++ ++   +G + +VV +S LI + C+ G V
Sbjct: 263 SARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRV 322

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
             AV++L+ M ++G+ P+  +Y+ +I AF +    +  ++ +E+ +            C 
Sbjct: 323 REAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDG---------CL 373

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
            D              I  +  ++A     G  +          L VF+K+ ++   P V
Sbjct: 374 PD--------------IVNYNTILATLCKFGCAD--------LALDVFEKLDEVGCPPTV 411

Query: 646 VTFSAILNACSRC-NSFEDASMLLEELR 672
             ++ + +A   C N  +   M+ E +R
Sbjct: 412 RAYNTMFSALWSCGNKIKALEMISEMIR 439


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 192/350 (54%), Gaps = 6/350 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN-SMKRYNLKP 261
           L R+GKVD A+ +    LN+     V  F+ LI+ Y   G   EA +V + SM      P
Sbjct: 332 LCRMGKVDEARML----LNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 387

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           ++ TYN +I    K G       E+ ++M   G +P+ IT+  L+    + G  E ARN+
Sbjct: 388 DIFTYNTLILGLCKKGY-LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 446

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            +EM  +G+  +   YN L+ A+CK  ++  A  +  +M +K   P++ T++++I G  K
Sbjct: 447 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 506

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
             + ++AL ++ +M   G+  + ++YNT++  + + G  +EAL +  +M   G   D +T
Sbjct: 507 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 566

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN L+    + G  ++   +FE M +  ++PN ++ + LI+   + G  + A++  R+  
Sbjct: 567 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 626

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             GL  D+V Y++LI+ LCK G  + A++L D++  EGI P+ +TYN++I
Sbjct: 627 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 676



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 229/474 (48%), Gaps = 41/474 (8%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            +I  L ++G+V+    + E  L  G    V  F+  I    +     EA  + + M   
Sbjct: 257 TLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLR 316

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGV-QPDRITFNSLL-AVCSRGGL 314
              PN  TY  ++   C  G VD          ML N V  P+ + FN+L+    SRG L
Sbjct: 317 GFTPNSFTYGVLMHGLCRMGKVDEAR-------MLLNKVPNPNVVLFNTLINGYVSRGRL 369

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA   +   M+  G   DIFTYNTL+  +CK   +  A E+M EM  K   PNV+TY+ 
Sbjct: 370 DEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTI 429

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +ID + K GRL++A N+  EM   G+ L+ V YN ++S   K  + ++AL +  +M S G
Sbjct: 430 LIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG 489

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
            + D  T+N+L+ G  K  K++E   +++ M  + V  N +TY+TLI  + + G  +EA+
Sbjct: 490 CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEAL 549

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++  +    G   D + Y+ LI ALC+ G +E  ++L ++M  +G+ PN ++ N +I+  
Sbjct: 550 KLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGL 609

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            R+   +  ++ +                     +D+   G T +  I  +  L+     
Sbjct: 610 CRTGNIQHALEFL---------------------RDMIHRGLTPD--IVTYNSLINGLCK 646

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
            G+ +          L +F K+    I P+ +T++ +++   +   F+DA +LL
Sbjct: 647 TGRAQEA--------LNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLL 692



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 184/356 (51%), Gaps = 2/356 (0%)

Query: 207 GKVDLAKNIF-ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           G++D AK +  E+ L+ G G  ++ ++ LI    + GY   A  + N M+    +PN++T
Sbjct: 367 GRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVIT 426

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           Y  +ID   K G   +    + D+M   G+  + + +N L++   +    + A N+F +M
Sbjct: 427 YTILIDRFCKEG-RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 485

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             +G   DIFT+N+L+  +CK  + + A  +  +M  + +  N +TY+T+I  + + G +
Sbjct: 486 SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 545

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            +AL + ++M F G  LD ++YN ++    + G  E+ L + ++M S G+  + ++ N L
Sbjct: 546 QEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL 605

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  + G           M    ++P+++TY++LI+   K G  +EA+ +F + +  G+
Sbjct: 606 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 665

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             D + Y+ LI   CK G+ + A  LL      G  PN VT+  ++  F +    E
Sbjct: 666 CPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 124/516 (24%), Positives = 220/516 (42%), Gaps = 50/516 (9%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           +GY +    +  LI   G +G  +   ++   MK+  +      +  ++   G+ G+  +
Sbjct: 105 KGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQ 164

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
               + D       +P   ++N +L V   G   +   N+F EM+ +GI   ++T+  ++
Sbjct: 165 ATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVM 224

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
            A+C   ++D A  ++ +M      PN + Y T+I    K GR+++ L +  EM  +G  
Sbjct: 225 KALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCI 284

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D  ++N  +    K+ R  EA  +   M   G   ++ TY  L+ G  + GK DE R +
Sbjct: 285 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 344

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE-FKQAGLKADVVLYSALIDALC 520
             ++     +PN++ ++TLI+ Y   G   EA  +  E     G   D+  Y+ LI  LC
Sbjct: 345 LNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLC 400

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVE-RDLGKQKE 576
           K G + SA  L++EM  +G  PNV+TY  +ID F   GR       +D++  + L     
Sbjct: 401 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAV 460

Query: 577 SAN--LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
             N  + A+C   D+ VQ+A                                   L +F 
Sbjct: 461 GYNCLISALCK--DEKVQDA-----------------------------------LNMFG 483

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDN 692
            M     KP++ TF++++    + N FE+A  L +++ L       + +  L+    R  
Sbjct: 484 DMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 543

Query: 693 IWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
              +AL L +++           YN L   L   G 
Sbjct: 544 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 579



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 163/327 (49%), Gaps = 1/327 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L + G +  A+ +      +G    V  ++ LI  + + G  +EA +V + M  
Sbjct: 393 NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 452

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L  N V YN +I A  K     +  + +F DM   G +PD  TFNSL+    +   +E
Sbjct: 453 KGLALNAVGYNCLISALCKDE-KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 511

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L+ +M+  G+  +  TYNTL+ A  +   M  A +++ +M  +    + +TY+ +I
Sbjct: 512 EALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 571

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
               +AG ++  L +F +M   G+  + +S N +++   + G  + AL   ++M   G+ 
Sbjct: 572 KALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLT 631

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTYN+L+ G  K G+  E   +F++++ + + P+ +TY+TLI  + K G++ +A  +
Sbjct: 632 PDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLL 691

Query: 497 FREFKQAGLKADVVLYSALIDALCKNG 523
                 +G   + V +  L+    K G
Sbjct: 692 LSRGVDSGFIPNEVTWYILVSNFIKEG 718



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 163/316 (51%), Gaps = 5/316 (1%)

Query: 140 VSLGDILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS 197
           VS  +++ + + K C  +   YT L+      G   +A         +    N  G   +
Sbjct: 406 VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG--YN 463

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            +IS L +  KV  A N+F    ++G    ++ F++LI    +    +EA+ ++  M   
Sbjct: 464 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 523

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            +  N +TYN +I A  + G   +  +++ +DML  G   D IT+N L+    R G  E 
Sbjct: 524 GVIANTITYNTLIHAFLRRGA-MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEK 582

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
              LF +M+ +G++ +  + N L++ +C+   +  A E + +M  + ++P++VTY+++I+
Sbjct: 583 GLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLIN 642

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K GR  +ALN+F +++  GI  D ++YNT++S + K G F++A L+      SG   
Sbjct: 643 GLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIP 702

Query: 438 DAVTYNALLGGYGKQG 453
           + VT+  L+  + K+G
Sbjct: 703 NEVTWYILVSNFIKEG 718


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 150/579 (25%), Positives = 264/579 (45%), Gaps = 60/579 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI  LGR   VD  + + +    EG   +   F  +I+ Y R G  ++A+ +F  ++ + 
Sbjct: 85  MIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFG 144

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +P +  YN ++DA       F+ +  I+ +M R+G +P+  T+N LL    +    + A
Sbjct: 145 CQPTVKIYNHLLDAMLSEN-RFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGA 203

Query: 319 RNLFNEMVHRGIDQDIFTY------------------------------NTLLDAICKGA 348
             L  EM ++G + D+ +Y                              N L++  C+  
Sbjct: 204 CKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREY 263

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++   F ++ +M  K I PNV+TYST+I   +  G ++ AL ++++M   G   +  ++ 
Sbjct: 264 KVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFT 323

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           +++  Y   GR  EAL +   M   G   + V YN L+ G    GK  E   +  +M+ +
Sbjct: 324 SLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERN 383

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
             SPN+ TY  LID ++K G    A +I+ +    G   +VV+Y+++++ LC++ +   A
Sbjct: 384 GCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQA 443

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
            SL+++M+ +   PN VT+N+ I     S   EC +     +L  Q E       CS + 
Sbjct: 444 WSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAI-----NLFCQMEQYG----CSPNI 494

Query: 589 KDVQEA--GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL----CILGVFQKMHKL--- 639
           K   E   G      IK   +LV E   +G + N      +    C +G F++  KL   
Sbjct: 495 KTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGK 554

Query: 640 ----KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA--HGLLMGYRDNI 693
                +KP+ +T++ +  A       + A  LL++L      V  VA    LL G  + I
Sbjct: 555 MLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQI 614

Query: 694 WVQALSLF-----DEVKLMDSSTASAFYNALTDMLWHFG 727
            V+   L+     +E   ++++T +A    L + L H G
Sbjct: 615 GVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLG 653



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 190/360 (52%), Gaps = 10/360 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS + +LGKV+ A+      L+  +   V  ++ALI+ + R    +E   +   M  
Sbjct: 223 TTVISSMSKLGKVEEARE-----LSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVE 277

Query: 257 YNLKPNLVTYNAVIDAC-GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
             + PN++TY+ VI +  G G V+    + ++  M   G  P+  TF SL+     RG +
Sbjct: 278 KGIDPNVITYSTVISSLSGIGNVEL--ALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRV 335

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA  N++N M   G + ++  YNTL+  +C   +M  A  + ++M     SPNV TY  
Sbjct: 336 LEAL-NIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGA 394

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDG+AKAG L  A  ++++M   G   + V Y +++++  +   F +A  + ++M +  
Sbjct: 395 LIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDN 454

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              + VT+N  + G    G+ +    +F QM+    SPN+ TY+ ++D   K    KEA+
Sbjct: 455 CPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEAL 514

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++  E ++ G++ ++V Y+ +    C  G  E A+ LL +M   G++P+ +TYN++  A+
Sbjct: 515 ELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAY 574



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 217/513 (42%), Gaps = 77/513 (15%)

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           +TY  +I+  G+   D   V  +   M   G+      F +++    R GL E A  +F 
Sbjct: 80  LTYQIMIEKLGRE-CDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFY 138

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
            +   G    +  YN LLDA+    +  +   I + M      PNV TY+ ++    K  
Sbjct: 139 RIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNN 198

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           R+D A  +  EM   G   D VSY TV+S  +KLG+ EEA    +E+ S   + +   YN
Sbjct: 199 RVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA----REL-SIRFQPNVSVYN 253

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI---------------------- 481
           AL+ G+ ++ K  EV  +  QM    + PN++TYST+I                      
Sbjct: 254 ALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVR 313

Query: 482 ----DVYSKGGLYK---------EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
               +VY+   L K         EA+ I+    + G + +VV Y+ LI  LC +G +  A
Sbjct: 314 GCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEA 373

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSA-------------TTECTVDDVERDLGKQK 575
           VS+  +M + G  PNV TY ++ID F ++              T  C  + V        
Sbjct: 374 VSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVY------ 427

Query: 576 ESANLDAMCS----QDDKDVQEAGRTDN--QIIKVFGQLVAEKAGQGKKENRCRQEILCI 629
            ++ ++ +C          + E   TDN       F   +      G+ E        C 
Sbjct: 428 -TSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVE--------CA 478

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY 689
           + +F +M +    PN+ T++ +L+   + N  ++A  L+ E+     ++  V +  + G 
Sbjct: 479 INLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGG 538

Query: 690 RDNI--WVQALSLFDEVKLMDSSTASAFYNALT 720
             N+  + +AL L  ++ +      +  YN LT
Sbjct: 539 FCNVGKFEEALKLLGKMLVGGVKPDAITYNTLT 571



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 115/244 (47%), Gaps = 23/244 (9%)

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           S   +   +TY  ++   G++   D V+ + +QMK + +S +   +  +I+ Y + GL +
Sbjct: 72  SKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAE 131

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +A+++F   ++ G +  V +Y+ L+DA+      +    +   M ++G  PNV TYN ++
Sbjct: 132 QALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILL 191

Query: 552 DAFGRSATTE--CTVDDVERDLGKQKESANLDAMCSQDDK--DVQEAGRTDNQI---IKV 604
            A  ++   +  C +     + G + +  +   + S   K   V+EA     +    + V
Sbjct: 192 KALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSV 251

Query: 605 FGQLVAEKAGQGKKENRCRQ----EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           +  L+            CR+    E+  +LG   +M +  I PNV+T+S ++++ S   +
Sbjct: 252 YNALI---------NGFCREYKVKEVFLLLG---QMVEKGIDPNVITYSTVISSLSGIGN 299

Query: 661 FEDA 664
            E A
Sbjct: 300 VELA 303


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 207/402 (51%), Gaps = 3/402 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT ++  L   G+  KA   F   + R    +      S++IS L +   +D A  +F  
Sbjct: 210 YTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVV--TYSSIISALSKTQAMDKATQVFTR 267

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +  G       +++L+  Y  SG  +EAI +F  M R+ ++P++VTY A++D   K G 
Sbjct: 268 MVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGK 327

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                 +IFD +++ G +PD  T+ +LL   +  G      +L + M+ +G+      +N
Sbjct: 328 S-TEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFN 386

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            ++ A  K  ++D A  + + M  + ++P++V Y T++D    AGR+DDAL+ F+ +K  
Sbjct: 387 MIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSE 446

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  + V + T++       ++++   +  EM   GI  D + +NA++G   K+G+  E 
Sbjct: 447 GLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEA 506

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
           + +F+ M    + PN  TY+TLID Y   G   EAM++       G+K   V Y+ +I+ 
Sbjct: 507 KNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIING 566

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
             +NG +E  ++LL EM  +G+ P +VTY  ++    ++  T
Sbjct: 567 YSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRT 608



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 171/328 (52%), Gaps = 3/328 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V A++ +I+   R G   +A S+F++M      P++VTY+++I A  K         ++F
Sbjct: 207 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQA-MDKATQVF 265

Query: 288 DDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             M++NGV PD I + SL+   CS G   EA   +F +M   G++ D+ TY  L+D +CK
Sbjct: 266 TRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAI-GIFKKMCRHGVEPDVVTYTALMDYLCK 324

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +   A +I   +  +   P+  TY T++ GYA  G L +  ++   M   G+ L    
Sbjct: 325 NGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHI 384

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +N ++  YAK  + +EALLV   M   G+  D V Y  +L      G+ D+    F  +K
Sbjct: 385 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 444

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           ++ ++PN++ ++TLI        + +  ++  E    G+  D + ++A++  LCK G V 
Sbjct: 445 SEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVI 504

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            A +L D M + GI PN  TYN++ID +
Sbjct: 505 EAKNLFDLMVRIGIEPNTNTYNTLIDGY 532



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 140/558 (25%), Positives = 233/558 (41%), Gaps = 118/558 (21%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR---YNLKPNLVTYNA 268
           A  +F+  L  G   +++  +  +S   R+     AIS+FN M R    +  PN+ TY  
Sbjct: 46  AHQVFDRLLKRGDRASIFDLNRALSDVARASPAV-AISLFNRMPRAGATSAAPNIATYGI 104

Query: 269 VIDAC---GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNE 324
           VI  C   G+  + F  V  +    +  G++   I F+ LL  +C R    +A   +   
Sbjct: 105 VIGCCRRLGRLDLAFATVGRV----ITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRR 160

Query: 325 MVHRGIDQDIFTYNTLLDAIC------------------KG------------------- 347
           M   G   D+F+Y  LL  +C                  KG                   
Sbjct: 161 MPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLRE 220

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            Q+D A+ +   M  +  SP+VVTYS++I   +K   +D A  +F+ M   G+  D + Y
Sbjct: 221 GQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMY 280

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
            +++  Y   G+ +EA+ + K+M   G+  D VTY AL+    K GK  E R++F+ +  
Sbjct: 281 TSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVK 340

Query: 468 DCVSPNLLTYSTLIDVYSKGG-----------LYKEAMQ--------------------- 495
               P+  TY TL+  Y+  G           + K+ MQ                     
Sbjct: 341 RGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDE 400

Query: 496 ---IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
              +F   +Q GL  D+V Y  ++D LC  G V+ A+S  + +  EG+ PN+V + ++I 
Sbjct: 401 ALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIH 460

Query: 553 AFGRSATTECTVDDVER---------DLGKQKESANLDAMCSQDDKD--VQEAGRTDNQI 601
                    CT D  ++         D G   ++   +A+     K   V EA    + +
Sbjct: 461 GL-------CTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLM 513

Query: 602 IKV--------FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
           +++        +  L+      GK +     E + +LGV   M    +KP+ VT++ I+N
Sbjct: 514 VRIGIEPNTNTYNTLIDGYCLDGKMD-----EAMKLLGV---MVFNGVKPSDVTYNTIIN 565

Query: 654 ACSRCNSFEDASMLLEEL 671
             S+    ED   LL E+
Sbjct: 566 GYSQNGRIEDGLTLLREM 583



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 149/382 (39%), Gaps = 80/382 (20%)

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP---AKNISPNVVTYST 374
           A  +F+ ++ RG    IF  N  L  + + A   +A  +   MP   A + +PN+ TY  
Sbjct: 46  AHQVFDRLLKRGDRASIFDLNRALSDVAR-ASPAVAISLFNRMPRAGATSAAPNIATYGI 104

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
                                              V+    +LGR + A      + ++G
Sbjct: 105 -----------------------------------VIGCCRRLGRLDLAFATVGRVITTG 129

Query: 435 IRKDAVTYNALLGGY-GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           +R   + ++ LL G   ++   D +  +  +M      P+L +Y+ L+         ++A
Sbjct: 130 LRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQA 189

Query: 494 MQIFREFK--QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           + +       +     DVV Y+ +I+ L + G ++ A SL D M   G  P+VVTY+SII
Sbjct: 190 LDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSII 249

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
            A  ++   +       R +   K     D +                    ++  LV  
Sbjct: 250 SALSKTQAMDKATQVFTRMV---KNGVMPDCI--------------------MYTSLVHG 286

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               GK +          +G+F+KM +  ++P+VVT++A+++   +     +A  + + L
Sbjct: 287 YCSSGKPKE--------AIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSL 338

Query: 672 ----RLFDNQVYGVAHGLLMGY 689
                  D+  YG    LL GY
Sbjct: 339 VKRGHKPDSTTYGT---LLHGY 357


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 192/350 (54%), Gaps = 6/350 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN-SMKRYNLKP 261
           L R+GKVD A+ +    LN+     V  F+ LI+ Y   G   EA +V + SM      P
Sbjct: 350 LCRMGKVDEARML----LNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 405

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           ++ TYN +I    K G       E+ ++M   G +P+ IT+  L+    + G  E ARN+
Sbjct: 406 DIFTYNTLILGLCKKGY-LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 464

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            +EM  +G+  +   YN L+ A+CK  ++  A  +  +M +K   P++ T++++I G  K
Sbjct: 465 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 524

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
             + ++AL ++ +M   G+  + ++YNT++  + + G  +EAL +  +M   G   D +T
Sbjct: 525 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 584

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN L+    + G  ++   +FE M +  ++PN ++ + LI+   + G  + A++  R+  
Sbjct: 585 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 644

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             GL  D+V Y++LI+ LCK G  + A++L D++  EGI P+ +TYN++I
Sbjct: 645 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 694



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 229/475 (48%), Gaps = 41/475 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
             +I  L ++G+V+    + E  L  G    V  F+  I    +     EA  + + M  
Sbjct: 274 QTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLL 333

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGV-QPDRITFNSLL-AVCSRGG 313
               PN  TY  ++   C  G VD          ML N V  P+ + FN+L+    SRG 
Sbjct: 334 RGFTPNSFTYGVLMHGLCRMGKVDEAR-------MLLNKVPNPNVVLFNTLINGYVSRGR 386

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           L EA   +   M+  G   DIFTYNTL+  +CK   +  A E+M EM  K   PNV+TY+
Sbjct: 387 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 446

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +ID + K GRL++A N+  EM   G+ L+ V YN ++S   K  + ++AL +  +M S 
Sbjct: 447 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK 506

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G + D  T+N+L+ G  K  K++E   +++ M  + V  N +TY+TLI  + + G  +EA
Sbjct: 507 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 566

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           +++  +    G   D + Y+ LI ALC+ G +E  ++L ++M  +G+ PN ++ N +I+ 
Sbjct: 567 LKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 626

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
             R+   +  ++ +                     +D+   G T +  I  +  L+    
Sbjct: 627 LCRTGNIQHALEFL---------------------RDMIHRGLTPD--IVTYNSLINGLC 663

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
             G+ +          L +F K+    I P+ +T++ +++   +   F+DA +LL
Sbjct: 664 KTGRAQEA--------LNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLL 710



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 184/356 (51%), Gaps = 2/356 (0%)

Query: 207 GKVDLAKNIF-ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           G++D AK +  E+ L+ G G  ++ ++ LI    + GY   A  + N M+    +PN++T
Sbjct: 385 GRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVIT 444

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           Y  +ID   K G   +    + D+M   G+  + + +N L++   +    + A N+F +M
Sbjct: 445 YTILIDRFCKEG-RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 503

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             +G   DIFT+N+L+  +CK  + + A  +  +M  + +  N +TY+T+I  + + G +
Sbjct: 504 SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 563

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            +AL + ++M F G  LD ++YN ++    + G  E+ L + ++M S G+  + ++ N L
Sbjct: 564 QEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL 623

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  + G           M    ++P+++TY++LI+   K G  +EA+ +F + +  G+
Sbjct: 624 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 683

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             D + Y+ LI   CK G+ + A  LL      G  PN VT+  ++  F +    E
Sbjct: 684 CPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 124/516 (24%), Positives = 221/516 (42%), Gaps = 50/516 (9%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           +GY +    +  LI   G +G  +   ++   MK+  +      +  ++   G+ G+  +
Sbjct: 123 KGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQ 182

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
               + D       +P   ++N +L V   G   +   N+F EM+ +GI   ++T+  ++
Sbjct: 183 ATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVM 242

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
            A+C   ++D A  ++ +M      PN + Y T+I   +K GR+++ L +  EM  +G  
Sbjct: 243 KALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCI 302

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D  ++N  +    K+ R  EA  +   M   G   ++ TY  L+ G  + GK DE R +
Sbjct: 303 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 362

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE-FKQAGLKADVVLYSALIDALC 520
             ++     +PN++ ++TLI+ Y   G   EA  +  E     G   D+  Y+ LI  LC
Sbjct: 363 LNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLC 418

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVE-RDLGKQKE 576
           K G + SA  L++EM  +G  PNV+TY  +ID F   GR       +D++  + L     
Sbjct: 419 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAV 478

Query: 577 SAN--LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
             N  + A+C   D+ VQ+A                                   L +F 
Sbjct: 479 GYNCLISALCK--DEKVQDA-----------------------------------LNMFG 501

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDN 692
            M     KP++ TF++++    + N FE+A  L +++ L       + +  L+    R  
Sbjct: 502 DMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 561

Query: 693 IWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
              +AL L +++           YN L   L   G 
Sbjct: 562 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 597



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 163/327 (49%), Gaps = 1/327 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L + G +  A+ +      +G    V  ++ LI  + + G  +EA +V + M  
Sbjct: 411 NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 470

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L  N V YN +I A  K     +  + +F DM   G +PD  TFNSL+    +   +E
Sbjct: 471 KGLALNAVGYNCLISALCKDE-KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 529

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L+ +M+  G+  +  TYNTL+ A  +   M  A +++ +M  +    + +TY+ +I
Sbjct: 530 EALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 589

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
               +AG ++  L +F +M   G+  + +S N +++   + G  + AL   ++M   G+ 
Sbjct: 590 KALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLT 649

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTYN+L+ G  K G+  E   +F++++ + + P+ +TY+TLI  + K G++ +A  +
Sbjct: 650 PDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLL 709

Query: 497 FREFKQAGLKADVVLYSALIDALCKNG 523
                 +G   + V +  L+    K G
Sbjct: 710 LSRGVDSGFIPNEVTWYILVSNFIKEG 736



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 163/316 (51%), Gaps = 5/316 (1%)

Query: 140 VSLGDILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS 197
           VS  +++ + + K C  +   YT L+      G   +A         +    N  G   +
Sbjct: 424 VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG--YN 481

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            +IS L +  KV  A N+F    ++G    ++ F++LI    +    +EA+ ++  M   
Sbjct: 482 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 541

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            +  N +TYN +I A  + G   +  +++ +DML  G   D IT+N L+    R G  E 
Sbjct: 542 GVIANTITYNTLIHAFLRRGA-MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEK 600

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
              LF +M+ +G++ +  + N L++ +C+   +  A E + +M  + ++P++VTY+++I+
Sbjct: 601 GLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLIN 660

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K GR  +ALN+F +++  GI  D ++YNT++S + K G F++A L+      SG   
Sbjct: 661 GLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIP 720

Query: 438 DAVTYNALLGGYGKQG 453
           + VT+  L+  + K+G
Sbjct: 721 NEVTWYILVSNFIKEG 736


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 186/355 (52%), Gaps = 1/355 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+    L +VD A ++    L  G+      F+ L+      G   EA+ VF+ M  
Sbjct: 95  TIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVG 154

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +PN+VTY  +++   K        + +F +M+  G+ PD  T+NSL+        W+
Sbjct: 155 EGFQPNVVTYGTLMNGLCKDR-QLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWK 213

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               L NEMV   I  ++ + N ++DA+CK  ++  A +++  M    + P+VVTY+ ++
Sbjct: 214 HVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALM 273

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG+     +D+A+ +F  M   G   + VSYNT+++ Y K+ R ++A+ + +EM    + 
Sbjct: 274 DGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELI 333

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + +TY+ L+ G    G+  +   +F +M A    PNL+TYS L+D   K     EAM +
Sbjct: 334 PNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMAL 393

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            +  + + L  DV +Y+  ID +C+ G +E+A  L   +   G++P+V T+N +I
Sbjct: 394 LKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMI 448



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 199/392 (50%), Gaps = 11/392 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKN--DQGKLASAMISILGRLGKVDLAKNIF 216
           +T L+R L   G+  +A+  F   V    + N    G L +     L +  ++  A N+F
Sbjct: 129 FTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNG----LCKDRQLTEALNLF 184

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
              + +G    ++ +++LI A       +   ++ N M +  + PN+V+ N V+DA C +
Sbjct: 185 SEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKE 244

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           G V   H  ++ D M++ GV+PD +T+ +L+   C R  + EA + +F+ MV  G   ++
Sbjct: 245 GKVTEAH--DVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVK-VFDMMVRNGCVCNV 301

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            +YNTL++  CK  ++D A  +  EM  + + PN +TYST+I G    GRL DA+ +F+E
Sbjct: 302 VSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNE 361

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G   + V+Y+ +L    K  R  EA+ + K +E S +  D   YN  + G  + G 
Sbjct: 362 MVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGD 421

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            +  R +F  +    + P++ T++ +I    K GL  EA ++FRE  + G   +   Y+ 
Sbjct: 422 LEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNT 481

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
           +   L +N     A+ LL+EM   G   +V T
Sbjct: 482 ITQGLLQNNKTSRAIQLLEEMLARGFSADVST 513



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 201/379 (53%), Gaps = 5/379 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++  L  +GK+  A ++F+  + EG+   V  +  L++   +     EA+++F+ M  
Sbjct: 130 TTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIA 189

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
             + P++ TYN++I A C     ++KHV  + ++M+++ + P+ ++ N ++ A+C  G +
Sbjct: 190 KGISPDIFTYNSLIHALCNL--CEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKV 247

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA  ++ + M+  G++ D+ TY  L+D  C  ++MD A ++   M       NVV+Y+T
Sbjct: 248 TEA-HDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNT 306

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I+GY K  R+D A+ +F EM    +  + ++Y+T++     +GR ++A+ +  EM + G
Sbjct: 307 LINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACG 366

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              + VTY+ LL    K  +  E   + + ++   + P++  Y+  ID   + G  + A 
Sbjct: 367 QIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAAR 426

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +F      GL+ DV  ++ +I  LCK GL++ A  L  EM + G   N  TYN+I    
Sbjct: 427 DLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGL 486

Query: 555 GRSATTECTVDDVERDLGK 573
            ++  T   +  +E  L +
Sbjct: 487 LQNNKTSRAIQLLEEMLAR 505



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 178/345 (51%), Gaps = 5/345 (1%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G    VY  + +I+++        A+SV   + +   +P+  T+  ++   C  G +   
Sbjct: 86  GIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKI--G 143

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
             +++FD M+  G QP+ +T+ +L+  +C    L EA  NLF+EM+ +GI  DIFTYN+L
Sbjct: 144 EALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEAL-NLFSEMIAKGISPDIFTYNSL 202

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           + A+C   +      ++ EM    I PNVV+ + ++D   K G++ +A ++   M   G+
Sbjct: 203 IHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGV 262

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D V+Y  ++  +      +EA+ V   M  +G   + V+YN L+ GY K  + D+   
Sbjct: 263 EPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMY 322

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +FE+M    + PN +TYSTLI      G  ++A+ +F E    G   ++V YS L+D LC
Sbjct: 323 LFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLC 382

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           KN  +  A++LL  +    + P+V  YN  ID   R+   E   D
Sbjct: 383 KNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARD 427



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 171/344 (49%), Gaps = 7/344 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L N  EW          VK +   N      + ++  L + GKV  A ++ + 
Sbjct: 199 YNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS--LNIVVDALCKEGKVTEAHDVVDM 256

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +  G    V  ++AL+  +       EA+ VF+ M R     N+V+YN +I+  C    
Sbjct: 257 MIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQR 316

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           +D    + +F++M R  + P+ +T+++L+  +C  G L +A   LFNEMV  G   ++ T
Sbjct: 317 ID--KAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIA-LFNEMVACGQIPNLVT 373

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y+ LLD +CK  ++  A  ++  +   N+ P+V  Y+  IDG  +AG L+ A ++FS + 
Sbjct: 374 YSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLA 433

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  D  ++N ++    K G  +EA  + +EM+ +G  ++  TYN +  G  +  K  
Sbjct: 434 PRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTS 493

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
              ++ E+M A   S ++ T + L+ + S  GL +   QI  EF
Sbjct: 494 RAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQILCEF 537



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 186/400 (46%), Gaps = 35/400 (8%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F  ML     P    F  LL   ++   +    +L  +M   GI  D++T   ++++ C 
Sbjct: 44  FHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCH 103

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++D A  ++A++      P+  T++T++ G    G++ +AL++F +M   G   + V+
Sbjct: 104 LNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVT 163

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T+++   K  +  EAL +  EM + GI  D  TYN+L+       ++  V  +  +M 
Sbjct: 164 YGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 223

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + PN+++ + ++D   K G   EA  +     Q G++ DVV Y+AL+D  C    ++
Sbjct: 224 KSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMD 283

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            AV + D M + G   NVV+YN++I+ +       C +  +++ +   +E      MC Q
Sbjct: 284 EAVKVFDMMVRNGCVCNVVSYNTLINGY-------CKIQRIDKAMYLFEE------MCRQ 330

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
           +           N +   +  L+      G+ ++         + +F +M      PN+V
Sbjct: 331 E--------LIPNTM--TYSTLIHGLCHVGRLQDA--------IALFNEMVACGQIPNLV 372

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLF----DNQVYGVA 682
           T+S +L+   + +   +A  LL+ +       D QVY +A
Sbjct: 373 TYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIA 412



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 105/463 (22%), Positives = 202/463 (43%), Gaps = 43/463 (9%)

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
           +N  Q   + FN+L          + A + F+ M+H      IF +  LL +I K     
Sbjct: 24  QNNFQSKSLHFNTL----------DDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYS 73

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
               +  +M +  I P+V T + +I+ +    R+D AL++ +++  LG   D  ++ T++
Sbjct: 74  TVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLV 133

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
                +G+  EAL V  +M   G + + VTY  L+ G  K  +  E   +F +M A  +S
Sbjct: 134 RGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGIS 193

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P++ TY++LI        +K    +  E  ++ +  +VV  + ++DALCK G V  A  +
Sbjct: 194 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDV 253

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
           +D M + G+ P+VVTY +++D  G    +E  +D+  +       +  +  + S      
Sbjct: 254 VDMMIQGGVEPDVVTYAALMD--GHCLRSE--MDEAVKVFDMMVRNGCVCNVVSY----- 304

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
                  N +I  + ++          E  CRQE++               PN +T+S +
Sbjct: 305 -------NTLINGYCKIQRIDKAMYLFEEMCRQELI---------------PNTMTYSTL 342

Query: 652 LNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDS 709
           ++        +DA  L  E+         V + +L+ Y  +++   +A++L   ++  + 
Sbjct: 343 IHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNL 402

Query: 710 STASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES 752
                 YN   D +   G    A+ +      R +  +VW+ +
Sbjct: 403 DPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHN 445


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 224/496 (45%), Gaps = 73/496 (14%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           A++A+I  + R   C  A+     M    + P++ TYN +ID   K     K   E+  +
Sbjct: 228 AYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDK-ASEMLHE 286

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M+  GV PD +TFNS++    + G +E A +L   M  R       TYNTL+  +CK   
Sbjct: 287 MVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQN 346

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A +++ E  +    P+VVTYS + DG  K GR+D+A  +  EM   G   + V+YNT
Sbjct: 347 VDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNT 406

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    K  + E+A  + + + SSG   D VTY  ++ G  K+G+ D+  +M E M    
Sbjct: 407 LIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 466

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV------------------- 510
            +P+++TY+ L++   + G   EA  IF+E       AD +                   
Sbjct: 467 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 526

Query: 511 -------------LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
                        +Y+AL+D  CK G ++   ++ ++M   G  PN+ TYN ++D   + 
Sbjct: 527 KVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKH 586

Query: 558 ATTE-------------CTVDDVERDL--------GKQKESAN-LDAMCSQDDKDVQEAG 595
              +             C  D V  ++         K KE+   LD M         +AG
Sbjct: 587 GKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMI--------QAG 638

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
              + +   +  L+A    Q  KE R    +    G+ + M K  + P+ VT++ +++  
Sbjct: 639 IPPDAV--TYNTLMA----QFCKEERFDDAV----GILKNMIKAGVDPDNVTYNTLISGL 688

Query: 656 SRCNSFEDASMLLEEL 671
           S+ N   DA  L+ E+
Sbjct: 689 SQTNRLGDAYELMHEM 704



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 141/592 (23%), Positives = 252/592 (42%), Gaps = 85/592 (14%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           D  TF  ++  L   G++ +A    A   +R  R +      + +IS L +   VD AK+
Sbjct: 295 DTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPS--CCTYNTLISGLCKQQNVDRAKD 352

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           + +  ++ G+   V  +S L     + G   EA  +   M      PNLVTYN +ID   
Sbjct: 353 LVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLC 412

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K     K   E+ + ++ +G  PD +T+  ++    + G  + A  +   M+ RG    +
Sbjct: 413 KASKTEK-AYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSV 471

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS---------------------------- 366
            TY  L++ +C+  ++D A  I  EM +K+ +                            
Sbjct: 472 ITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDG 531

Query: 367 ----PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
               P +  Y+ ++DGY K GRLD+  N+F +M   G   +  +YN V+    K G+ +E
Sbjct: 532 IRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDE 591

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A    + M S+G   D V+YN ++ G  K  K  E R++ +QM    + P+ +TY+TL+ 
Sbjct: 592 AFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMA 651

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL--------------------------- 515
            + K   + +A+ I +   +AG+  D V Y+ L                           
Sbjct: 652 QFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVV 711

Query: 516 ---------IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECT 563
                    ID LCK G ++ A+ L+D MT  G+  N VTYN  ID     GR       
Sbjct: 712 SACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSL 771

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ----GKKE 619
           + +++    +   +  +  +C  +  D   A +   +++ V G  +             +
Sbjct: 772 LSEMDTLRDEVSYTTVIIGLCKAEQLD--RASKLAREMVAVKGLCITSHTFNLLIDAFTK 829

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            +   E L +LG+   M +    P+V+T++ ++    + +  + A  L +E+
Sbjct: 830 TKRLDEALTLLGL---MVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 878



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 172/376 (45%), Gaps = 12/376 (3%)

Query: 185 REERKNDQGKLASAMIS-ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGY 243
           RE  +  +G L  A++S +L RL     A   F  A + G+ ++ +  +  +     +G 
Sbjct: 81  RERLEQWRGTLQPAVVSRVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGS 140

Query: 244 CQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
                ++F  M      P+  TY+ VI + C    +D      + D     G +P+   +
Sbjct: 141 SDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQID--KAFTMLDKAKVRGFKPEVSVY 198

Query: 303 NSLL-AVCSRGGLWEAARNLFNEMVHRGI-DQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
             L  A C  G L +A        + R I   D   YN ++   C+    D A E + EM
Sbjct: 199 TILTRAFCKTGRLKDALE------IFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEM 252

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
             + ++P+V TY+ +IDG  KA + D A  M  EM   G+  D V++N+++    K G+F
Sbjct: 253 NERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKF 312

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           E A  +   M     R    TYN L+ G  KQ   D  + + ++  +    P+++TYS L
Sbjct: 313 ERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSIL 372

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
            D   K G   EA ++ +E    G   ++V Y+ LID LCK    E A  LL+ +   G 
Sbjct: 373 ADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGF 432

Query: 541 RPNVVTYNSIIDAFGR 556
            P+VVTY  I+D   +
Sbjct: 433 VPDVVTYTIIVDGLCK 448



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/443 (23%), Positives = 197/443 (44%), Gaps = 31/443 (6%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G +    T N  L      G  +    +F  M+  G   D +TY+ ++ ++C+  Q+D A
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKA 179

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
           F ++ +   +   P V  Y+ +   + K GRL DAL +F  +       D ++YN ++  
Sbjct: 180 FTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHG 235

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           + +    + AL   KEM    +  D  TYN L+ G  K  K D+   M  +M    V+P+
Sbjct: 236 HCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPD 295

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +T+++++D   K G ++ A  +     +   +     Y+ LI  LCK   V+ A  L+D
Sbjct: 296 TVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVD 355

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ------KESANLDAMC--S 585
           E    G  P+VVTY+ + D   +    +   + V+   GK         +  +D +C  S
Sbjct: 356 EFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKAS 415

Query: 586 QDDK--DVQEAGRTDNQIIKV--FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
           + +K  ++ E+  +   +  V  +  +V     +G+ +          L + + M K   
Sbjct: 416 KTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDK--------ALKMVEGMLKRGC 467

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLF 701
            P+V+T++A++    R    ++A  + +E+   D     +A+  L+    N + ++    
Sbjct: 468 TPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLV----NGYCKSSRTK 523

Query: 702 DEVKLMDSSTASAF---YNALTD 721
           +  K++D    + +   YNAL D
Sbjct: 524 EAQKVVDGIRGTPYIDVYNALMD 546



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 155/340 (45%), Gaps = 35/340 (10%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + GKVD A    E+  + G    V +++ +I    ++   +EA  V + M +  + P+
Sbjct: 583 LCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPD 642

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
            VTYN ++    K    F   V I  +M++ GV PD +T+N+L++  S+      A  L 
Sbjct: 643 AVTYNTLMAQFCKEE-RFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELM 701

Query: 323 NEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           +EM+  G +     TYNT++D +CK   +  A  +M  M    +  N VTY+  ID   K
Sbjct: 702 HEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCK 761

Query: 382 AGRLDDALNMFSEMKFLG---------IGL------DRVS------------------YN 408
            GRLD+A ++ SEM  L          IGL      DR S                  +N
Sbjct: 762 EGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFN 821

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            ++  + K  R +EAL +   M   G     +TYN ++    K  K D+   +F++M   
Sbjct: 822 LLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVR 881

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            +  + ++Y+ LI      G  KEA+Q+  E   +  + D
Sbjct: 882 GIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEID 921



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 8/245 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEG-YGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           + +IS L +  ++  A  +    L  G   +    ++ +I    + G  ++A+ + + M 
Sbjct: 682 NTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT 741

Query: 256 RYNLKPNLVTYNAVID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
            + ++ N VTYN  ID  C +G +D    +    D LR     D +++ +++    +   
Sbjct: 742 GHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR-----DEVSYTTVIIGLCKAEQ 796

Query: 315 WEAARNLFNEMVH-RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            + A  L  EMV  +G+     T+N L+DA  K  ++D A  ++  M  +  SP+V+TY+
Sbjct: 797 LDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYN 856

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I    K  ++D A  +F EM   GI    VSY  ++      GR +EAL V +EM SS
Sbjct: 857 MVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASS 916

Query: 434 GIRKD 438
               D
Sbjct: 917 DCEID 921


>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
          Length = 665

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 163/602 (27%), Positives = 268/602 (44%), Gaps = 102/602 (16%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK---LASAMISILGRLGKVDLAKNI 215
           Y  ++   G  G W KA++     + ++  +N  G      + ++S L    +   A + 
Sbjct: 84  YNNVINACGAAGNWKKALE-----LCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISY 138

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK--RYNLKPNLVTYNAVIDA- 272
           FE        +  +  + +I    + G C EAI +FNSM+  R    P++VTY +++ + 
Sbjct: 139 FEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSY 198

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C  G V+  +   IFD M+  GV+P+ + +NSLL   +  G+   A  +FN +   G+  
Sbjct: 199 CIYGQVE--NCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRP 256

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           DI +Y +LL+A  + AQ + A E+  +M   +  PN V+Y+ +ID Y  AG L +A+ + 
Sbjct: 257 DIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLL 316

Query: 393 SEM-----------------------------------KFLGIGLDRVSYNTVLSIYAKL 417
            EM                                   +  GI L+ V+YN+ +  Y   
Sbjct: 317 HEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSF 376

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM------------ 465
           G +E+AL +   M  S ++ DAVTYN L+ G  K GKY E  R FE M            
Sbjct: 377 GDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGK 436

Query: 466 ------------KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
                       K+ C  P++LTY+TLI  Y+ GG +K A  +F+E +  G+  D ++ S
Sbjct: 437 LSEAESTFSSMKKSGCF-PDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICS 495

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           +L++A  K G  E  + L++ M K+ I  N  +Y  II          CT+    RD   
Sbjct: 496 SLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEII--------ASCTMI---RDWKT 544

Query: 574 QKESAN-LDAMCSQDDKD--------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
             E    LD+  S             + + G+T+N ++K+F ++V   +  G        
Sbjct: 545 ASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTEN-MMKLFYKMVTSCSTVGLSTYAVVL 603

Query: 625 EILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL-RLFDN 676
             L ++G       V Q M    + P +  F  +L    R N  + A+ + E++  L D 
Sbjct: 604 RNLLVVGKWRKYIEVLQWMEDSGVHPTLYMFQNVLPYIWRENGMDFAATMQEKISSLRDK 663

Query: 677 QV 678
           Q 
Sbjct: 664 QT 665



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 179/328 (54%), Gaps = 3/328 (0%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +  +I  Y R     +A  +F  M+ +  KP+   YN++I A  + G  ++  + I +DM
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAG-QWRWAINIMEDM 72

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           LR  + P R T+N+++  C   G W+ A  L  +M   G+  D+ T+N +L A+  GAQ 
Sbjct: 73  LRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQY 132

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL--DRVSYN 408
             A      M   N++ +  T + +I    K G+  +A+ +F+ M+        D V+Y 
Sbjct: 133 SKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYT 192

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           +++  Y   G+ E    +   M + G++ + V YN+LLG Y  +G + E   +F  +K +
Sbjct: 193 SIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKN 252

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + P++++Y++L++ Y +    ++A ++F + K+   K + V Y+ALIDA    G+++ A
Sbjct: 253 GLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEA 312

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           V LL EM K+GI+P+VV+ ++++ A GR
Sbjct: 313 VGLLHEMEKDGIQPDVVSISTLLAACGR 340



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 217/495 (43%), Gaps = 46/495 (9%)

Query: 181 FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           F   +E R      + +++I    R G+   A NI E  L      T   ++ +I+A G 
Sbjct: 34  FFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGA 93

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
           +G  ++A+ +   M    + P+LVT+N V+ A  K G  +   +  F+ M    V  D  
Sbjct: 94  AGNWKKALELCKKMTENGVGPDLVTHNIVLSAL-KNGAQYSKAISYFEIMKGANVTSDTF 152

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGID--QDIFTYNTLLDAICKGAQMDLAFEIMA 358
           T N ++    + G    A  LFN M  R      D+ TY +++ + C   Q++    I  
Sbjct: 153 TLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFD 212

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
            M A+ + PN+V Y++++  YA  G   +AL +F+ +K  G+  D VSY ++L+ Y +  
Sbjct: 213 LMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSA 272

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           + E+A  V  +M+ +  + + V+YNAL+  YG  G   E   +  +M+ D + P++++ S
Sbjct: 273 QPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSIS 332

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           TL+    +         I    +  G+  + V Y++ I +    G  E A+ L   M + 
Sbjct: 333 TLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRES 392

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
            ++P+ VTYN +I    +              LGK  ES                     
Sbjct: 393 NVKPDAVTYNILISGSSK--------------LGKYTES--------------------- 417

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
              ++ F  +V  K    K+      E       F  M K    P+V+T++ ++ A +  
Sbjct: 418 ---LRFFEDMVDSKVSSTKEGKLSEAE-----STFSSMKKSGCFPDVLTYTTLIQAYNAG 469

Query: 659 NSFEDASMLLEELRL 673
             ++ A  L +E+ +
Sbjct: 470 GGWKRAWDLFKEMEV 484



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 108/254 (42%), Gaps = 40/254 (15%)

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  ++  Y +  + D+ R +F +M+     P+   Y++LI  +S+ G ++ A+ I  +  
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +A +      Y+ +I+A    G  + A+ L  +MT+ G+ P++VT+N ++ A    A   
Sbjct: 74  RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133

Query: 562 CTVDDVERDLGKQKES----ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
             +   E   G    S     N+   C        EA       I++F  +        +
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEA-------IELFNSM-------RE 179

Query: 618 KENRCRQEIL---------CILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
           +  +C  +++         CI G       +F  M    +KPN+V ++++L A      +
Sbjct: 180 RRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGA------Y 233

Query: 662 EDASMLLEELRLFD 675
               M  E L +F+
Sbjct: 234 ASRGMHREALAIFN 247


>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Glycine max]
          Length = 564

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 194/361 (53%), Gaps = 5/361 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           M+ + G+L + DLA ++ +   + G   TV+ FSAL+  Y R+G   EA+  FN M+ Y 
Sbjct: 184 MLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRMEDYG 243

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             P++V ++ VI + C K   +     + F D L++  +PD + + SL+    R G    
Sbjct: 244 CTPDMVAFSIVISSLCKKRRAN---EAQSFFDSLKHRFEPDVVVYTSLVHGWCRAGDISK 300

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +F++M   GI  +++TY+ ++D++C+  Q+  A ++ +EM      PN VT+++++ 
Sbjct: 301 AEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMR 360

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            + KAGR +  L ++++MK LG   D +SYN ++  + +    EEA  +   M   G+  
Sbjct: 361 VHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAP 420

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +A T+N + G   K    +   RM+ +MK     PN LTY+ L+ ++++       +++ 
Sbjct: 421 NASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMK 480

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG-IRPNVVTYNSIIDAFGR 556
           +E  ++ ++ +V  Y  LI   C      +A  L+ EM +E  +RPN+  Y ++++   +
Sbjct: 481 KEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRK 540

Query: 557 S 557
           +
Sbjct: 541 A 541



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 174/341 (51%), Gaps = 17/341 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-----SAMISILGRLGKVDLAK 213
           ++ L+R     G  ++A+  F        R  D G        S +IS L +  + + A+
Sbjct: 216 FSALVRRYVRAGLAAEAVHAF-------NRMEDYGCTPDMVAFSIVISSLCKKRRANEAQ 268

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA- 272
           + F++ L   +   V  +++L+  + R+G   +A  VF+ MK   +KPN+ TY+ VID+ 
Sbjct: 269 SFFDS-LKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSL 327

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C  G +   H  ++F +M+  G  P+ +TFNSL+ V  + G  E    ++N+M   G   
Sbjct: 328 CRCGQITRAH--DVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPA 385

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D  +YN ++++ C+   ++ A +I+  M  K ++PN  T++ +    AK   ++ A  M+
Sbjct: 386 DTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMY 445

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           + MK L    + ++YN ++ ++A+    +  L + KEM+ S +  +  TY  L+  +   
Sbjct: 446 ARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDM 505

Query: 453 GKYDEVRR-MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             ++   + M E ++  C+ PNL  Y T++++  K G  K+
Sbjct: 506 KHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKK 546



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 159/316 (50%), Gaps = 3/316 (0%)

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           YN ++D  GK    F     + D M   GV+    TF++L+    R GL   A + FN M
Sbjct: 181 YNEMLDLAGKLR-QFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRM 239

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              G   D+  ++ ++ ++CK  + + A      +  +   P+VV Y++++ G+ +AG +
Sbjct: 240 EDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHR-FEPDVVVYTSLVHGWCRAGDI 298

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             A  +FS+MK  GI  +  +Y+ V+    + G+   A  V  EM  +G   +AVT+N+L
Sbjct: 299 SKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSL 358

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +  + K G+ ++V +++ QMK      + ++Y+ +I+ + +    +EA +I     + G+
Sbjct: 359 MRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGV 418

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
             +   ++ +   + K   V  A  +   M +   +PN +TYN ++  F  S +T+  V 
Sbjct: 419 APNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTD-MVL 477

Query: 566 DVERDLGKQKESANLD 581
            +++++ + +   N++
Sbjct: 478 KMKKEMDESQVEPNVN 493



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 143/325 (44%), Gaps = 50/325 (15%)

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+ M+D   K  + D A ++   MK  G+ +   +++ ++  Y + G   EA+     ME
Sbjct: 181 YNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRME 240

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G   D V ++ ++    K+ + +E +  F+ +K     P+++ Y++L+  + + G   
Sbjct: 241 DYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHR-FEPDVVVYTSLVHGWCRAGDIS 299

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +A ++F + K AG+K +V  YS +ID+LC+ G +  A  +  EM   G  PN VT+NS++
Sbjct: 300 KAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLM 359

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
               +                                     AGRT+ +++KV+ Q+  +
Sbjct: 360 RVHVK-------------------------------------AGRTE-KVLKVYNQM--K 379

Query: 612 KAGQGKK--------ENRCRQEILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
           + G            E+ CR E L     +   M K  + PN  TF+ I    ++ +   
Sbjct: 380 RLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVN 439

Query: 663 DASMLLEELRLFDNQVYGVAHGLLM 687
            A  +   ++  + Q   + + +LM
Sbjct: 440 GAHRMYARMKELNCQPNTLTYNILM 464



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 125/280 (44%), Gaps = 8/280 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+      G+ SKA + F+       + N      S +I  L R G++  A ++F  
Sbjct: 285 YTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYT--YSIVIDSLCRCGQITRAHDVFSE 342

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            ++ G       F++L+  + ++G  ++ + V+N MKR     + ++YN +I++  +   
Sbjct: 343 MIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDE- 401

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           + +   +I + M++ GV P+  TFN +    ++      A  ++  M       +  TYN
Sbjct: 402 NLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYN 461

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM--- 395
            L+    +    D+  ++  EM    + PNV TY  +I  +      ++A  +  EM   
Sbjct: 462 ILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEE 521

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           K L   L    Y TVL +  K G+ ++   +  +M + G 
Sbjct: 522 KCLRPNLS--VYETVLELLRKAGQLKKHEELVDKMVARGF 559


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 208/400 (52%), Gaps = 4/400 (1%)

Query: 160 TFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETA 219
           +  +  L + G+   A    A  VKR     D   L + M  +  + G+   A N+++ A
Sbjct: 95  SIFINSLTHLGQMGLAFSVMAKIVKRG-FGVDPFTLTTLMKGLCLK-GRTFEALNLYDHA 152

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
           +++G+      +  LI+   + G  ++AI +   M++  ++PNL+ YN V+D   K G+ 
Sbjct: 153 VSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGL- 211

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR-GIDQDIFTYN 338
                 +  +M+  G+  D  T+NSL+      G ++ A  L NEMV +  +  D++T+N
Sbjct: 212 VTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFN 271

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+DA+CK   +  A  +   M  + + P+VV+ + +++G+   G + +A  +F  M   
Sbjct: 272 ILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVER 331

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   + +SY+T+++ Y K+   +EAL +  EM    +  D VTYN LL G  K G+    
Sbjct: 332 GKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYE 391

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + E M+A   +P+L+TY+ L+D Y K     +A+ +F+     G+  ++  Y+ LID 
Sbjct: 392 WDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDG 451

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           LCK G +++A  +   ++ +G RPN+ TYN +I+   R  
Sbjct: 452 LCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREG 491



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 225/463 (48%), Gaps = 25/463 (5%)

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVTYNA 268
           D A + F   L+     ++ + + L+S+  ++ +    +S+ + +  +   KP+LVT + 
Sbjct: 37  DDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSI 96

Query: 269 VIDAC---GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNE 324
            I++    G+ G+ F  + +I    ++ G   D  T  +L+  +C +G  +EA  NL++ 
Sbjct: 97  FINSLTHLGQMGLAFSVMAKI----VKRGFGVDPFTLTTLMKGLCLKGRTFEAL-NLYDH 151

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
            V +G   D   Y TL++ +CK  +   A E++ +M    + PN++ Y+ ++DG  K G 
Sbjct: 152 AVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGL 211

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM-ESSGIRKDAVTYN 443
           + +A  + SEM   GI +D  +YN+++  +   G+F+ A+ +  EM     +R D  T+N
Sbjct: 212 VTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFN 271

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+    K G   E R +F  M    + P++++ + L++ +   G   EA ++F    + 
Sbjct: 272 ILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVER 331

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           G   +V+ YS LI+  CK  +V+ A+ LL EM +  + P+ VTYN ++D   +S      
Sbjct: 332 GKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYE 391

Query: 564 VDDVE--RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
            D VE  R  G+  +    + +   DD   +E     ++ + +F  +V        +   
Sbjct: 392 WDLVEAMRASGQAPDLITYNVL--LDDYLKREC---LDKALALFQHIVDTGISPNIRTYN 446

Query: 622 CRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSR 657
              + LC  G       +FQ +     +PN+ T++ ++N   R
Sbjct: 447 ILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRR 489



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 188/363 (51%), Gaps = 6/363 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   G+   AI+      K   R N    + + ++  L + G V  A  +   
Sbjct: 164 YGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLI--MYNMVVDGLCKEGLVTEACGLCSE 221

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVTYNAVIDACGKGG 277
            + +G    V+ +++LI  +  +G  Q A+ + N M  + +++P++ T+N ++DA  K G
Sbjct: 222 MVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLG 281

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           +       +F  M++ G++PD ++ N+L+   C RG + EA + +F+ MV RG   ++ +
Sbjct: 282 M-VAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEA-KEVFDRMVERGKLPNVIS 339

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y+TL++  CK   +D A  ++ EM  +N+ P+ VTY+ ++DG +K+GR+    ++   M+
Sbjct: 340 YSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMR 399

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G   D ++YN +L  Y K    ++AL + + +  +GI  +  TYN L+ G  K G+  
Sbjct: 400 ASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMK 459

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
             + +F+ +      PN+ TY+ +I+   + GL  EA  +  E    G   + V +  L+
Sbjct: 460 AAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLV 519

Query: 517 DAL 519
            AL
Sbjct: 520 RAL 522



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 202/453 (44%), Gaps = 34/453 (7%)

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI-SPNVVTYS 373
           ++ A + F+ M+H      I + N LL +I K         + + + +K    P++VT S
Sbjct: 36  FDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLS 95

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
             I+     G++  A ++ +++   G G+D  +  T++      GR  EAL +     S 
Sbjct: 96  IFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSK 155

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G   D V Y  L+ G  K GK  +   +  +M+   V PNL+ Y+ ++D   K GL  EA
Sbjct: 156 GFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEA 215

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT-KEGIRPNVVTYNSIID 552
             +  E    G+  DV  Y++LI   C  G  + AV LL+EM  KE +RP+V T+N ++D
Sbjct: 216 CGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVD 275

Query: 553 A---FGRSATTECTVDDVERDLGKQKESANLDAM--------CSQDDKDV----QEAGRT 597
           A    G  A     V  +    G + +  + +A+        C  + K+V     E G+ 
Sbjct: 276 ALCKLGMVAEAR-NVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKL 334

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
            N I   +  L+      G  + +   E L +L    +MH+  + P+ VT++ +L+  S+
Sbjct: 335 PNVI--SYSTLI-----NGYCKVKMVDEALRLL---TEMHQRNLVPDTVTYNCLLDGLSK 384

Query: 658 CNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAF 715
                    L+E +R        + + +L+    +     +AL+LF  +     S     
Sbjct: 385 SGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRT 444

Query: 716 YNALTDMLWHFGQKRGA----QLVVLEGKRRQV 744
           YN L D L   G+ + A    QL+ ++G R  +
Sbjct: 445 YNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNI 477


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 154/616 (25%), Positives = 287/616 (46%), Gaps = 76/616 (12%)

Query: 103 RFVSKMHFGRPKIAMSTRHSVVAEEALHHVTA---------------FARDDVSLGDILK 147
           RFV ++ F  P      +H+ ++  A+ H+                   R  VS  +I+ 
Sbjct: 87  RFVDQLGFNFPNF----KHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVN 142

Query: 148 KF--EFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISIL 203
                +  CG++D  F  L+R      +  +A +  AF + R +         +A+I  L
Sbjct: 143 SLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYE--AFTLLRSKGYTVSIDACNALIGSL 200

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
            R+G V+LA  I++     G G  VY  + +++A  + G  ++  +  + ++   + P++
Sbjct: 201 VRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDI 260

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           VTYN +I A    G+  +   E+   M   G  P   T+N+++    + G +E A+ +F 
Sbjct: 261 VTYNTLISAYSSQGL-MEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 319

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EM+  G+  D  TY +LL   CK         I ++M ++++ P++V +S+M+  + ++G
Sbjct: 320 EMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSG 379

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            LD AL  F+ +K  G+  D V Y  ++  Y + G   EA+ +  EM   G   D VTYN
Sbjct: 380 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYN 439

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            +L G  K+    E  ++F +M    + P+  T + LID + K G  + AM++F++ K+ 
Sbjct: 440 TILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEK 499

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
            +K DVV Y+ L+D   K G +++A  +  +M  + I P  ++++ +++A        C+
Sbjct: 500 RIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNAL-------CS 552

Query: 564 VDDVERDLGKQKESANL-DAMCSQDDKDVQEAGRTDNQIIKVF--------GQLVAEKA- 613
                   G   E+  + D M S   K ++      N +IK +        G++  EK  
Sbjct: 553 K-------GHLSEAFRVWDEMIS---KSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMI 602

Query: 614 ----------------GQGKKENRCRQEILCILGVFQKMHKLK--IKPNVVTFSAILNAC 655
                           G  K+EN  +       G+ +KM + +  + P+V T+++IL+  
Sbjct: 603 SEGFVPDCISYNTLIYGFVKEENMSKA-----FGLVKKMEEKQGGLVPDVFTYNSILHGF 657

Query: 656 SRCNSFEDASMLLEEL 671
            R N  ++A  +L ++
Sbjct: 658 CRENQMKEAEAVLRKM 673



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 207/404 (51%), Gaps = 9/404 (2%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           G   Y  ++  L   G++ +A + FA  + R     D     S ++    +   V+  +N
Sbjct: 294 GVYTYNTVINGLCKHGKYERAKEVFA-EMLRSGLSPDSTTYRSLLMEACKKGDAVE-TEN 351

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-C 273
           IF    +      +  FS+++S + RSG   +A+  FNS+K   L P+ V Y  +I   C
Sbjct: 352 IFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 411

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQ 332
            KG +     + + ++ML+ G   D +T+N++L  +C R  L EA + LFNEM  RG+  
Sbjct: 412 RKGMIS--EAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK-LFNEMTERGLFP 468

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D +T   L+D  CK   +  A E+  +M  K I  +VVTY+T++DG+ K G +D A  ++
Sbjct: 469 DSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIW 528

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           ++M    I    +S++ +++     G   EA  V  EM S  I+   +  N+++ GY + 
Sbjct: 529 ADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRS 588

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR--EFKQAGLKADVV 510
           G   +     E+M ++   P+ ++Y+TLI  + K     +A  + +  E KQ GL  DV 
Sbjct: 589 GNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVF 648

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            Y++++   C+   ++ A ++L +M + G+ P+  TY S+I+ F
Sbjct: 649 TYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGF 692



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 154/349 (44%), Gaps = 38/349 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S+M+S+  R G +D A   F +    G       ++ LI  Y R G   EA+++ N M +
Sbjct: 369 SSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQ 428

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                ++VTYN ++    K  +      ++F++M   G+ PD  T   L+    + G  +
Sbjct: 429 QGCAMDVVTYNTILHGLCKRKM-LGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQ 487

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLD---------------------------------- 342
            A  LF +M  + I  D+ TYNTLLD                                  
Sbjct: 488 NAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILV 547

Query: 343 -AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
            A+C    +  AF +  EM +K+I P V+  ++MI GY ++G   D      +M   G  
Sbjct: 548 NALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFV 607

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESS--GIRKDAVTYNALLGGYGKQGKYDEVR 459
            D +SYNT++  + K     +A  + K+ME    G+  D  TYN++L G+ ++ +  E  
Sbjct: 608 PDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAE 667

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            +  +M    V+P+  TY++LI+ +       EA +   E  Q G   D
Sbjct: 668 AVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 145/309 (46%), Gaps = 6/309 (1%)

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT--FNSLLAVCSRGGL 314
           Y  + +L      +D  G    +FKH       M+   V+  R++   + +L +  R G+
Sbjct: 76  YRCRNDLSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGV 135

Query: 315 --WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              E   +L +   + G +  +F  + L+    +  ++  A+E    + +K  + ++   
Sbjct: 136 SRVEIVNSLVSTYSNCGSNDSVF--DLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDAC 193

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +I    + G ++ A  ++ E+   G+G++  + N +++   K G+ E+      E++ 
Sbjct: 194 NALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQE 253

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G+  D VTYN L+  Y  QG  +E   +   M +   SP + TY+T+I+   K G Y+ 
Sbjct: 254 KGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYER 313

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A ++F E  ++GL  D   Y +L+   CK G      ++  +M    + P++V ++S++ 
Sbjct: 314 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMS 373

Query: 553 AFGRSATTE 561
            F RS   +
Sbjct: 374 LFTRSGNLD 382


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 240/524 (45%), Gaps = 59/524 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI  L R G++D A  +       G   TV  ++ L+ A  RSG  +EA  +   M  
Sbjct: 220 TVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVE 279

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L+P++VT+  +I+   +G   F  V  +  +M   G+ P+ + +N L+    R G   
Sbjct: 280 GRLRPSIVTFGILINGLARGQ-RFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF+EMV +GI Q + TYN +  A+CK  +M+ A +I+ EM    ++ +   +++++
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398

Query: 377 DGYAKA-GRLDDALNMFSEM--KFL---------------------------------GI 400
             + +  GRLD  L +  EM  +FL                                 G+
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGL 458

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
           G++  + N ++    +    +EA  V K M  SG+  D +TYN ++    K  K +E  +
Sbjct: 459 GVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQ 518

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + + M      P+L T++T +  Y   G  ++ + +  + K  GLK D+V Y  +ID  C
Sbjct: 519 LRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYC 578

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR--SATTECTVDDVERDLGKQKESA 578
           K   V  A   L E+ K G+RPN V YN++I  +GR  S +    V D  +  G Q    
Sbjct: 579 KAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPI 638

Query: 579 NLDA----MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG--- 631
             ++    MC      V+EA        ++F Q + +    G        +  C +G   
Sbjct: 639 TYNSLMYWMCHAG--LVEEAK-------EIFAQCILKNIELGVIGYTIIIQGFCKIGKID 689

Query: 632 ----VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                F++MH   I+PN +T++ ++ A  +C + E+A  L +E+
Sbjct: 690 EAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEM 733



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 174/339 (51%), Gaps = 8/339 (2%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
            +A I    + G  +EA  ++  +    L  N+ T NA+I    +G  + K   ++   M
Sbjct: 430 MTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGN-NMKEATKVLKAM 488

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           + +GV+ DRIT+N ++  C +    E A  L ++M+ RG   D+FT+NT L A C   ++
Sbjct: 489 VDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKV 548

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           +    ++ +M ++ + P++VTY T+IDGY KA  +  A     E+   G+  + V YN +
Sbjct: 549 EDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNAL 608

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +  Y + G   +A+ V   M+ +GI+   +TYN+L+      G  +E + +F Q     +
Sbjct: 609 IGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNI 668

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
              ++ Y+ +I  + K G   EA+  F+E     ++ + + Y+ L+ A CK G  E A  
Sbjct: 669 ELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFK 728

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           L DEM   GI P+ V+YN++I          C VD +++
Sbjct: 729 LFDEMVSSGIVPDTVSYNTLISGC-------CEVDSLDK 760



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 174/354 (49%), Gaps = 3/354 (0%)

Query: 183 VKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSG 242
           V R  + ND   + +A I  L + GK + A  I+   L +G G  +   +ALI    +  
Sbjct: 419 VARFLKPNDA--VMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGN 476

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
             +EA  V  +M    ++ + +TYN +I  C K     +  +++ DDM++ G +PD  TF
Sbjct: 477 NMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKAS-KMEEAIQLRDDMIKRGFKPDLFTF 535

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           N+ L      G  E   +L ++M   G+  DI TY T++D  CK   +  A + + E+  
Sbjct: 536 NTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIK 595

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
             + PN V Y+ +I GY + G + DA+ +   MK  GI    ++YN+++      G  EE
Sbjct: 596 NGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEE 655

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A  +  +     I    + Y  ++ G+ K GK DE    F++M    + PN +TY+TL+ 
Sbjct: 656 AKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMY 715

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
            Y K G  +EA ++F E   +G+  D V Y+ LI   C+   ++  V    EM+
Sbjct: 716 AYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMS 769



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 230/501 (45%), Gaps = 33/501 (6%)

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLR-NGVQPDRITFNS 304
           A   F  +      P++ T N +++A G GG +D     ++F +M   N V PD  T+  
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLAR--KVFGEMRDGNAVAPDVYTYTV 221

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           ++    R G  +AA  +  E+   GI   + TYN L+DA+C+  +++ AF++   M    
Sbjct: 222 MIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGR 281

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           + P++VT+  +I+G A+  R  +   +  EM+  GI  + V YN ++  + + G   EAL
Sbjct: 282 LRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEAL 341

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +  EM S GI++  VTYN +     K+G+ +   ++ ++M    ++ +   +++++  +
Sbjct: 342 RLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWH 401

Query: 485 SKG-GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            +G G     +++ RE     LK +  + +A I  LCK G  E A  +   +  +G+  N
Sbjct: 402 LRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVN 461

Query: 544 VVTYNSIIDAF--GRSATTECTVDDVERDLGKQKESANLDAM---CSQDDKDVQEAGRTD 598
           + T N++I     G +      V     D G + +    + M   C +  K ++EA +  
Sbjct: 462 IATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASK-MEEAIQLR 520

Query: 599 NQIIK--------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
           + +IK         F   +      GK E+        IL +  +M    +KP++VT+  
Sbjct: 521 DDMIKRGFKPDLFTFNTFLRAYCNLGKVED--------ILHLLDQMKSEGLKPDIVTYGT 572

Query: 651 ILNACSRCNSFEDASMLLEEL---RLFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKL 706
           I++   +      A+  L EL    L  N V  + + L+ GY R+     A+ + D +K 
Sbjct: 573 IIDGYCKAKDVHKANKYLIELIKNGLRPNAV--IYNALIGGYGRNGSISDAIGVLDTMKH 630

Query: 707 MDSSTASAFYNALTDMLWHFG 727
                    YN+L   + H G
Sbjct: 631 NGIQPTPITYNSLMYWMCHAG 651



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 130/240 (54%), Gaps = 1/240 (0%)

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN-ISPNVVT 371
           G    A + F E+  RG    I T N L++A+  G Q+DLA ++  EM   N ++P+V T
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+ MI    +AG +D A  M +E++  GI    V+YN ++    + GR EEA  +   M 
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
              +R   VT+  L+ G  +  ++ EV  + ++M+   ++PN + Y+ LI  + + G   
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA+++F E    G+K  VV Y+ +  ALCK G +E A  +LDEM   G+  +   +NS++
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 1/227 (0%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           LGKV+   ++ +   +EG    +  +  +I  Y ++    +A      + +  L+PN V 
Sbjct: 545 LGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVI 604

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           YNA+I   G+ G      + + D M  NG+QP  IT+NSL+      GL E A+ +F + 
Sbjct: 605 YNALIGGYGRNG-SISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQC 663

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           + + I+  +  Y  ++   CK  ++D A     EM  ++I PN +TY+T++  Y K G  
Sbjct: 664 ILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNK 723

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           ++A  +F EM   GI  D VSYNT++S   ++   ++ +    EM S
Sbjct: 724 EEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS 770



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 116/280 (41%), Gaps = 69/280 (24%)

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA-GLKADVVLYSALIDALC 520
           F ++     SP++ T + L++    GG    A ++F E +    +  DV  Y+ +I ALC
Sbjct: 168 FLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALC 227

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           + G +++A  +L E+ + GI+P VVTYN +                             +
Sbjct: 228 RAGEIDAAFVMLAELERSGIQPTVVTYNVL-----------------------------M 258

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
           DA+C         +GR              E+A Q K                 +M + +
Sbjct: 259 DALC--------RSGRV-------------EEAFQLKG----------------RMVEGR 281

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQAL 698
           ++P++VTF  ++N  +R   F +   +L+E+  F      V +  L+G+  R+    +AL
Sbjct: 282 LRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEAL 341

Query: 699 SLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
            LFDE+           YN +   L   G+   A+ ++ E
Sbjct: 342 RLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDE 381


>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 234/477 (49%), Gaps = 34/477 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-K 255
           S ++ +LG+   V+ A +IF          T   ++++I    + G+ ++   ++N M  
Sbjct: 163 SEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCN 222

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             +  P+ VTY+A+I A GK G D    + +FD+M  NG+ P    + ++L +  + G  
Sbjct: 223 EGDCLPDTVTYSALIAAFGKLGRD-DSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRV 281

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  L  EM  +G    ++TY  L+  + K  +++ A+ I   M  +   P+VV  + +
Sbjct: 282 EKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNL 341

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL-SIYAKLGRFEEALLVCKEMESSG 434
           I+   KAGRL DA+ +F EM+ L    + V+YNTV+ +++    R  EA L  ++M+ +G
Sbjct: 342 INLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENG 401

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +   + TY+ L+ G+ K  + ++   + E+M     +P    Y +LI+   K   Y+ A 
Sbjct: 402 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAAN 461

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++F+E ++    +   +Y+ +I  L K G +  AV L +EM K G  P+V  YN+++   
Sbjct: 462 ELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGM 521

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            R   T    D+    L   +E+      C+ D         + N I+  F +    K  
Sbjct: 522 VRVGMT----DEAHSLLRTMEENG-----CTPDLN-------SHNIILNGFARTGGPKGA 565

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                          + +F +M   KIKP+VV+++ +L   SR   FE+A+ L++E+
Sbjct: 566 ---------------IEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEM 607



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 193/396 (48%), Gaps = 37/396 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+I+  G+LG+ D A ++F+     G   T   ++ ++  Y + G  ++A+ +   MK 
Sbjct: 234 SALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKE 293

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                 + TY  +I   GK G   +    IF +ML+ G +PD +  N+L+ +  + G   
Sbjct: 294 KGCALTVYTYTELIKGVGKAG-KVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLA 352

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKG-AQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            A  LF EM       ++ TYNT++ A+ +  A+   AF    +M    + P+  TYS +
Sbjct: 353 DAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSIL 412

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS----------------------- 412
           IDG+ K  R++ AL +  EM   G      +Y ++++                       
Sbjct: 413 IDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCG 472

Query: 413 -----IYA-------KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
                +YA       K GR  EA+ +  EM+  G   D   YNAL+ G  + G  DE   
Sbjct: 473 YSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHS 532

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +   M+ +  +P+L +++ +++ +++ G  K A+++F   K + +K DVV Y+ ++  L 
Sbjct: 533 LLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLS 592

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           + G+ E A  L+ EM  +G   +++TY+SI++A G+
Sbjct: 593 RAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGK 628



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 199/405 (49%), Gaps = 51/405 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+   G  G    AI  F     +E   +   K+ + ++ I  +LG+V+ A  + + 
Sbjct: 233 YSALIAAFGKLGRDDSAISLFDEM--KENGLHPTAKIYTTILGIYFKLGRVEKALGLVQE 290

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G   TVY ++ LI   G++G  +EA S+F +M +   KP++V  N +I+  GK G 
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAG- 349

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-------AVCSRGGLWEAARNLFNEMVHRGID 331
                +++F++M      P+ +T+N+++       A  S   LW      + +M   G+ 
Sbjct: 350 RLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLW------YEKMKENGVV 403

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA--------- 382
              FTY+ L+D  CK  +++ A  ++ EM  K  +P    Y ++I+   KA         
Sbjct: 404 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANEL 463

Query: 383 --------------------------GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
                                     GRL +A+++F+EMK LG   D  +YN ++S   +
Sbjct: 464 FQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVR 523

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
           +G  +EA  + + ME +G   D  ++N +L G+ + G       MF +MK   + P++++
Sbjct: 524 VGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVS 583

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           Y+T++   S+ G+++EA ++ +E    G + D++ YS++++A+ K
Sbjct: 584 YNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGK 628



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 198/454 (43%), Gaps = 69/454 (15%)

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           KR N + +  TY A+I    + G+    + +   +M+R+         + ++ V  +  +
Sbjct: 116 KRRNFEHDSTTYMALIHCLDEAGM-LGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKM 174

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYS 373
              A ++F ++  R       TYN+++  + +    +   E+  EM  + +  P+ VTYS
Sbjct: 175 VNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYS 234

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I  + K GR D A+++F EMK  G+      Y T+L IY KLGR E+AL + +EM+  
Sbjct: 235 ALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEK 294

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G      TY  L+ G GK GK +E   +F  M  +   P+++  + LI++  K G   +A
Sbjct: 295 GCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADA 354

Query: 494 MQIFRE------------------------------------FKQAGLKADVVLYSALID 517
           +++F E                                     K+ G+      YS LID
Sbjct: 355 IKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILID 414

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
             CK   VE A+ LL+EM ++G  P    Y S+I+A G++               K+ E+
Sbjct: 415 GFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKA---------------KRYEA 459

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
           AN +      +     + R    +IK  G     K G+  +           + +F +M 
Sbjct: 460 AN-ELFQELRENCGYSSARVYAVMIKHLG-----KCGRLSEA----------VDLFNEMK 503

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           KL   P+V  ++A+++   R    ++A  LL  +
Sbjct: 504 KLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTM 537


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 237/501 (47%), Gaps = 47/501 (9%)

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           +A N+F   L+     T++ F  ++ A+        A+S+   M ++   PN V Y  +I
Sbjct: 200 VAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLI 259

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS-LLAVCSRGGLWEAARNLFNEMVHRG 329
            +  K        +++ ++M   G  PD  TFN  +L +C    + EAA+ + N M+ RG
Sbjct: 260 HSLSKCN-RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAK-MVNRMLIRG 317

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
              D  TY  L++ +CK  ++D A ++   +P     P +V ++T+I G+   GRLDDA 
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAK 373

Query: 390 NMFSEM-KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            + S+M    GI  D  +YN+++  Y K G    AL V  +M + G + +  +Y  L+ G
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           + K GK DE   +  +M AD + PN + ++ LI  + K     EA++IFRE  + G K D
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR------------ 556
           V  +++LI  LC+   ++ A+ LL +M  EG+  N VTYN++I+AF R            
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553

Query: 557 ------SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII--KVFGQL 608
                 S   E T + + + L +  E     ++  +  +D          I+   +    
Sbjct: 554 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613

Query: 609 VAEKAGQGKKENRCRQEI------------LCILG-------VFQKMHKLKIKPNVVTFS 649
           + E+A + +KE   R               LC  G       +F+K+    I P+ VTF+
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673

Query: 650 AILNACSRCNSFEDASMLLEE 670
            +++   +     DA +LL+E
Sbjct: 674 TLMSWLCKGGFVYDACLLLDE 694



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 191/350 (54%), Gaps = 6/350 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRYNLKP 261
           L ++G+VD AK++F           +  F+ LI  +   G   +A +V + M   Y + P
Sbjct: 332 LCKIGRVDAAKDLFYRIPKP----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           ++ TYN++I    K G+     +E+  DM   G +P+  ++  L+    + G  + A N+
Sbjct: 388 DVCTYNSLIYGYWKEGL-VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            NEM   G+  +   +N L+ A CK  ++  A EI  EMP K   P+V T++++I G  +
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
              +  AL +  +M   G+  + V+YNT+++ + + G  +EA  +  EM   G   D +T
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 566

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN+L+ G  + G+ D+ R +FE+M  D  +P+ ++ + LI+   + G+ +EA++  +E  
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             G   D+V +++LI+ LC+ G +E  +++  ++  EGI P+ VT+N+++
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 189/350 (54%), Gaps = 6/350 (1%)

Query: 207 GKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           G++D AK +    +   G    V  +++LI  Y + G    A+ V + M+    KPN+ +
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426

Query: 266 YNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFN 323
           Y  ++D  C  G +D      + ++M  +G++P+ + FN L+ A C    + EA   +F 
Sbjct: 427 YTILVDGFCKLGKID--EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE-IFR 483

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EM  +G   D++T+N+L+  +C+  ++  A  ++ +M ++ +  N VTY+T+I+ + + G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            + +A  + +EM F G  LD ++YN+++    + G  ++A  + ++M   G     ++ N
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+ G  + G  +E     ++M     +P+++T+++LI+   + G  ++ + +FR+ +  
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           G+  D V ++ L+  LCK G V  A  LLDE  ++G  PN  T++ ++ +
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 182/360 (50%), Gaps = 6/360 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L +  +++ A  +    L  G+      +  L++   + G    A  +F  +     KP 
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPE 352

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +V +N +I      G        +  DM+ + G+ PD  T+NSL+    + GL   A  +
Sbjct: 353 IVIFNTLIHGFVTHG-RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            ++M ++G   ++++Y  L+D  CK  ++D A+ ++ EM A  + PN V ++ +I  + K
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
             R+ +A+ +F EM   G   D  ++N+++S   ++   + AL + ++M S G+  + VT
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN L+  + ++G+  E R++  +M       + +TY++LI    + G   +A  +F +  
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + G     +  + LI+ LC++G+VE AV    EM   G  P++VT+NS+I+   R+   E
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 167/318 (52%), Gaps = 11/318 (3%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G V LA  +     N+G    VY+++ L+  + + G   EA +V N M    LKPN V +
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCS----RGGLWEAARNL 321
           N +I A  K        VEIF +M R G +PD  TFNSL++ +C     +  LW     L
Sbjct: 463 NCLISAFCKEH-RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW-----L 516

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             +M+  G+  +  TYNTL++A  +  ++  A +++ EM  +    + +TY+++I G  +
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCR 576

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           AG +D A ++F +M   G     +S N +++   + G  EEA+   KEM   G   D VT
Sbjct: 577 AGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 636

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           +N+L+ G  + G+ ++   MF +++A+ + P+ +T++TL+    KGG   +A  +  E  
Sbjct: 637 FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGI 696

Query: 502 QAGLKADVVLYSALIDAL 519
           + G   +   +S L+ ++
Sbjct: 697 EDGFVPNHRTWSILLQSI 714



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 173/376 (46%), Gaps = 42/376 (11%)

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI---DACG 274
           T    GY ++   +  LI   G +G  +    +   MK   +      + +++   D  G
Sbjct: 101 TGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAG 160

Query: 275 KGGVDFKHVVEIFDDMLRN--GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
             G   + ++E     +RN    +P   ++N +L +   G   + A N+F +M+ R I  
Sbjct: 161 FPGQTTRLMLE-----MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP 215

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
            +FT+  ++ A C   ++D A  ++ +M      PN V Y T+I   +K  R+++AL + 
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            EM  +G   D  ++N V+    K  R  EA  +   M   G   D +TY  L+ G  K 
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335

Query: 453 GKYDEVRRMFEQMK---------------------------ADCVS-----PNLLTYSTL 480
           G+ D  + +F ++                            +D V+     P++ TY++L
Sbjct: 336 GRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I  Y K GL   A+++  + +  G K +V  Y+ L+D  CK G ++ A ++L+EM+ +G+
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455

Query: 541 RPNVVTYNSIIDAFGR 556
           +PN V +N +I AF +
Sbjct: 456 KPNTVGFNCLISAFCK 471



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 157/332 (47%), Gaps = 43/332 (12%)

Query: 170 GEWSKAIQCFAFAVKREER-KNDQGKLASAMISILG--RLGKVDLAKNIFETALNEGYGN 226
           G W + +   A  V  + R K  +  + S  I + G  +LGK+D A N+      +G   
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD-FKHVVE 285
               F+ LISA+ +     EA+ +F  M R   KP++ T+N++I   G   VD  KH + 
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS--GLCEVDEIKHALW 515

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +  DM+  GV  + +T+N+L+    R G  + AR L NEMV +G   D  TYN+L+  +C
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575

Query: 346 KGAQMDLA-----------------------------------FEIMAEMPAKNISPNVV 370
           +  ++D A                                    E   EM  +  +P++V
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           T++++I+G  +AGR++D L MF +++  GI  D V++NT++S   K G   +A L+  E 
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEG 695

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
              G   +  T++ LL     Q   D  RR F
Sbjct: 696 IEDGFVPNHRTWSILLQSIIPQETLD--RRRF 725


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 150/558 (26%), Positives = 252/558 (45%), Gaps = 77/558 (13%)

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           +A N+F   L+     T++ F  ++ A         A+SV   M ++   PN V Y  +I
Sbjct: 194 VAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLI 253

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS-LLAVCSRGGLWEAARNLFNEMVHRG 329
            +  K        +++ ++M   G  PD  TFN  +L +C    + EAA+ + N M+ RG
Sbjct: 254 HSLSKCN-RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAK-MVNRMLIRG 311

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
              D  TY  L++ +CK  ++D A ++   +P     P  V ++T+I G+   GRLDDA 
Sbjct: 312 FTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPTSVIFNTLIHGFVTHGRLDDAK 367

Query: 390 NMFSEM-KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            + S+M    GI  D  +YN+++  Y K G    AL V ++M + G + +  +Y  L+ G
Sbjct: 368 AVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDG 427

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           + K GK DE   +  +M AD + PN + ++ LI  + K     EA++IFRE  + G K D
Sbjct: 428 FCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 487

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR------------ 556
           V  +++LI  LC+   ++ A+ LL +M  EG+  N VTYN++I+AF R            
Sbjct: 488 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 547

Query: 557 ------SATTECTVDDVERDLGKQKESANLDAMCSQDDKD-------------------- 590
                 S   E T + + + L +  E     ++  +  +D                    
Sbjct: 548 EMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSG 607

Query: 591 -VQEAGRTDNQI--------IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
            V+EA     ++        I  F  L+      G+ E+         L +F+K+    I
Sbjct: 608 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG--------LTMFRKLQAEGI 659

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLF 701
            P+ VT++ +++   +     DA +LL+E         G+  G +    D  W   L   
Sbjct: 660 PPDTVTYNTLMSWLCKGGFVYDACLLLDE---------GIEDGFVPN--DRTWSILLQSL 708

Query: 702 DEVKLMDSSTASAFYNAL 719
              + +D  T   FYNA+
Sbjct: 709 VPQETLDRRT---FYNAV 723



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 191/350 (54%), Gaps = 6/350 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRYNLKP 261
           L ++G+VD AK++F          T   F+ LI  +   G   +A +V + M   Y + P
Sbjct: 326 LCKIGRVDAAKDLFYRIPKP----TSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 381

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           ++ TYN++I    K G+     +E+  DM   G +P+  ++  L+    + G  + A NL
Sbjct: 382 DVCTYNSLIYGYWKKGL-VGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNL 440

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            NEM   G+  +   +N L+ A CK  ++  A EI  EMP K   P+V T++++I G  +
Sbjct: 441 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 500

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
              +  AL +  +M   G+  + V+YNT+++ + + G  +EA  +  EM   G   D +T
Sbjct: 501 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEIT 560

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN+L+ G  + G+ D+ R +FE+M  D + P+ ++ + LI+   + G+ +EA++  +E  
Sbjct: 561 YNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMV 620

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             G   D+V +++LI+ LC+ G +E  +++  ++  EGI P+ VTYN+++
Sbjct: 621 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLM 670



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 190/351 (54%), Gaps = 6/351 (1%)

Query: 207 GKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           G++D AK +    +   G    V  +++LI  Y + G    A+ V   M+    KPN+ +
Sbjct: 361 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYS 420

Query: 266 YNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFN 323
           Y  ++D  C  G +D      + ++M  +G++P+ + FN L+ A C    + EA   +F 
Sbjct: 421 YTILVDGFCKLGKID--EAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE-IFR 477

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EM  +G   D++T+N+L+  +C+  ++  A  ++ +M ++ +  N VTY+T+I+ + + G
Sbjct: 478 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 537

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            + +A  + +EM F G  LD ++YN+++    + G  ++A  + ++M   G+   +++ N
Sbjct: 538 EIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCN 597

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+ G  + G  +E     ++M     +P+++T+++LI+   + G  ++ + +FR+ +  
Sbjct: 598 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 657

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           G+  D V Y+ L+  LCK G V  A  LLDE  ++G  PN  T++ ++ + 
Sbjct: 658 GIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 181/360 (50%), Gaps = 6/360 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L +  +++ A  +    L  G+      +  L++   + G    A  +F  +     KP 
Sbjct: 291 LCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPT 346

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNL 321
            V +N +I      G        +  DM+ + G+ PD  T+NSL+    + GL   A  +
Sbjct: 347 SVIFNTLIHGFVTHG-RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEV 405

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             +M ++G   ++++Y  L+D  CK  ++D A+ ++ EM A  + PN V ++ +I  + K
Sbjct: 406 LRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCK 465

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
             R+ +A+ +F EM   G   D  ++N+++S   ++   + AL + ++M S G+  + VT
Sbjct: 466 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 525

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN L+  + ++G+  E R++  +M       + +TY++LI    + G   +A  +F +  
Sbjct: 526 YNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKML 585

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + GL    +  + LI+ LC++G+VE AV    EM   G  P++VT+NS+I+   R+   E
Sbjct: 586 RDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 645



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 149/659 (22%), Positives = 279/659 (42%), Gaps = 109/659 (16%)

Query: 171 EWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLG-KVDLAKNIFE-TALNEGYGNTV 228
           EW K ++ F      +  +N   K+    +  L  L   V  +  +F  T   +GY ++ 
Sbjct: 50  EWEKLLKPFDL----DSLRNSFHKITPFQLCKLLELPLDVSTSMELFSWTGSQKGYRHSF 105

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI---DACGKGGVDFKHVVE 285
             +  LI   G +G  +    +   MK   +      + +++   D  G  G   + ++E
Sbjct: 106 DVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLE 165

Query: 286 IFDDMLRN--GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
                +RN    +P   ++N +L +   G   + A N+F +M+ R I   +FT+  ++ A
Sbjct: 166 -----MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKA 220

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +C   ++D A  ++ +M      PN V Y T+I   +K  R+++AL +  EM  +G   D
Sbjct: 221 LCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 280

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             ++N V+    K  R  EA  +   M   G   D +TY  L+ G  K G+ D  + +F 
Sbjct: 281 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFY 340

Query: 464 QMK---------------------------ADCVS-----PNLLTYSTLIDVYSKGGLYK 491
           ++                            +D V+     P++ TY++LI  Y K GL  
Sbjct: 341 RIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVG 400

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            A+++ R+ +  G K +V  Y+ L+D  CK G ++ A +LL+EM+ +G++PN V +N +I
Sbjct: 401 LALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLI 460

Query: 552 DAFGRS----------------------------ATTECTVDDVE------RDLGKQKES 577
            AF +                              +  C VD+++      RD+  +   
Sbjct: 461 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 520

Query: 578 AN-------LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCI 629
           AN       ++A   +   +++EA +  N+++   G L+ E       +  CR  E+   
Sbjct: 521 ANTVTYNTLINAFLRRG--EIKEARKLVNEMV-FQGSLLDEITYNSLIKGLCRAGEVDKA 577

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL---------FDNQVYG 680
             +F+KM +  + P+ ++ + ++N   R    E+A    +E+ L         F++ + G
Sbjct: 578 RSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 637

Query: 681 VAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEG 739
           +        R       L++F +++       +  YN L   L   G    A L++ EG
Sbjct: 638 LC-------RAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEG 689



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 5/245 (2%)

Query: 144 DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           +I ++   K C  D YTF  L+  L    E   A+      +      N      + +I+
Sbjct: 474 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT--YNTLIN 531

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
              R G++  A+ +    + +G       +++LI    R+G   +A S+F  M R  L P
Sbjct: 532 AFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVP 591

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           + ++ N +I+   + G+  +  VE   +M+  G  PD +TFNSL+    R G  E    +
Sbjct: 592 SSISCNILINGLCRSGM-VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 650

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F ++   GI  D  TYNTL+  +CKG  +  A  ++ E       PN  T+S ++     
Sbjct: 651 FRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVP 710

Query: 382 AGRLD 386
              LD
Sbjct: 711 QETLD 715


>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 367

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 189/356 (53%)

Query: 188 RKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEA 247
           R    G   + ++ +LGR G    A+ +F+  L+ G    +++F+++I AY R G  ++A
Sbjct: 5   RLKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKA 64

Query: 248 ISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA 307
             ++  M    ++ + +T + ++   GK  +  +   +IF  +  NG+ P   T+N+LL+
Sbjct: 65  WRMYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLS 124

Query: 308 VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
           V SRGG  E  + L  EM    +  +I T+NTLL    +G ++  A E+   +    + P
Sbjct: 125 VLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKP 184

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
            VVTY+ ++  Y +A +  +A+ +F EM+ +G   D + Y+ ++S+Y K G  EEA LV 
Sbjct: 185 TVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVF 244

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           +++++ G   + VT+  L+  +G QGK  E+   F +M A    P+L  Y+ ++  Y + 
Sbjct: 245 RQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRY 304

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           G   +A  +FR  +  G+  + V Y  +I A C +     A  +LD+MT+ G  P+
Sbjct: 305 GHSVQAAILFRRMQAQGISPNAVSYDTMIQAYCHSKQAADAQIVLDQMTRAGFSPD 360



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 183/345 (53%), Gaps = 5/345 (1%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           + ++ ++   GR+G   +A  +F+ M    ++  L ++N++I A  + G+ FK    +++
Sbjct: 11  HTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGL-FKKAWRMYE 69

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGL-WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           DM+ +G+Q D IT ++LL+   +  L  E A  +F+++   GI   + TYNTLL  + +G
Sbjct: 70  DMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLSVLSRG 129

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
              +   E+  EM    + PN++T++T++  + + GRL +A  ++  +   G+    V+Y
Sbjct: 130 GHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPTVVTY 189

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
             ++ +Y +  + +EA+ V  EM   G + D + Y+ ++  YGK G  +E   +F Q++ 
Sbjct: 190 TGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQN 249

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
           D   PN++T+  LI  +   G  +E    F E   +G   D+ LY+ ++ A  + G    
Sbjct: 250 DGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYGHSVQ 309

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRS---ATTECTVDDVER 569
           A  L   M  +GI PN V+Y+++I A+  S   A  +  +D + R
Sbjct: 310 AAILFRRMQAQGISPNAVSYDTMIQAYCHSKQAADAQIVLDQMTR 354



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 167/304 (54%), Gaps = 2/304 (0%)

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           +++  LKPN  TY  V+   G+ G+  +   E+FD+ML +GV+    +FNS++   +R G
Sbjct: 1   VQKGRLKPNGHTYTLVLGVLGRAGLTIQ-ARELFDEMLSSGVEVGLHSFNSMIGAYARKG 59

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA-QMDLAFEIMAEMPAKNISPNVVTY 372
           L++ A  ++ +MV  GI  D  T +TLL  + K    ++ A +I +++    I P V TY
Sbjct: 60  LFKKAWRMYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETY 119

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T++   ++ G  +    +  EM+ L +  + +++NT+L ++ + GR +EA  V + +  
Sbjct: 120 NTLLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILD 179

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           +G++   VTY  L+  Y +  K+ E   +F +M+     P+L+ YS +I VY K G  +E
Sbjct: 180 AGLKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEE 239

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A  +FR+ +  G   +VV +  LI A    G ++   +  +EM   G  P++  YN ++ 
Sbjct: 240 AALVFRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMG 299

Query: 553 AFGR 556
           A+GR
Sbjct: 300 AYGR 303



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 1/200 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++  A  +++  L+ G   TV  ++ L+  Y R+   +EAI VF  M+R   KP+L+ Y
Sbjct: 165 GRLKEAAEVYQRILDAGLKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIY 224

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           + +I   GK G   +    +F  +  +G  P+ +T+  L+      G  +     FNEM+
Sbjct: 225 SLMISVYGKAG-SAEEAALVFRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEML 283

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G   D+  YN ++ A  +      A  +   M A+ ISPN V+Y TMI  Y  + +  
Sbjct: 284 ASGCLPDLTLYNVMMGAYGRYGHSVQAAILFRRMQAQGISPNAVSYDTMIQAYCHSKQAA 343

Query: 387 DALNMFSEMKFLGIGLDRVS 406
           DA  +  +M   G   DR S
Sbjct: 344 DAQIVLDQMTRAGFSPDRSS 363



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 125/245 (51%), Gaps = 9/245 (3%)

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++ +  TY  +LG  G+ G   + R +F++M +  V   L +++++I  Y++ GL+K+A 
Sbjct: 6   LKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAW 65

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGL-VESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           +++ +  ++G++AD +  S L+  + K  L VE+A  +  ++ + GI P V TYN+++  
Sbjct: 66  RMYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLSV 125

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDA-----MCSQDDKDVQEAGRTDNQIIKV-FGQ 607
             R   TE    ++E ++ + +   N+       M       ++EA     +I+      
Sbjct: 126 LSRGGHTE-RCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKP 184

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
            V    G  +   R  +    I  VF +M ++  KP+++ +S +++   +  S E+A+++
Sbjct: 185 TVVTYTGLVQMYCRASKHKEAI-EVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALV 243

Query: 668 LEELR 672
             +L+
Sbjct: 244 FRQLQ 248



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 132/290 (45%), Gaps = 38/290 (13%)

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + PN  TY+ ++ V  + GL  +A ++F E   +G++  +  ++++I A  + GL + A 
Sbjct: 6   LKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAW 65

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            + ++M + GI+ + +T ++++   G+   T+  V+  E+   K KE+  L  +      
Sbjct: 66  RMYEDMVESGIQADEITLSTLLSGVGK---TQLPVETAEKIFSKIKENGILPRV------ 116

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTF 648
                  T N ++ V  +        G    RC++ EI        +M +L++ PN++TF
Sbjct: 117 ------ETYNTLLSVLSR--------GGHTERCKELEI--------EMQRLEVVPNIITF 154

Query: 649 SAILNACSRCNSFEDASMLLEELRLFDNQVYGVA---HGLLMGY-RDNIWVQALSLFDEV 704
           + +L    +    ++A+ + +  R+ D  +        GL+  Y R +   +A+ +F E+
Sbjct: 155 NTLLMMHVQGGRLKEAAEVYQ--RILDAGLKPTVVTYTGLVQMYCRASKHKEAIEVFLEM 212

Query: 705 KLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
           + +        Y+ +  +    G    A LV  + +      NV +  CL
Sbjct: 213 RRVGCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNVVTWCCL 262


>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
 gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 855

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 244/537 (45%), Gaps = 62/537 (11%)

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   D  TY T++  + +  Q     +++ EM      PN VTY+ +I  Y +A  L +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           +N+F++M+  G   DRV+Y T++ I+AK G  + A+ + + M+ +G+  D  TY+ ++  
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            GK G      R+F +M     +PNL+T++ +I +++K   Y+ A++++R+ + AG + D
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            V YS +++ L   G +E A  +  EM ++   P+   Y  ++D +G++           
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNV-------- 585

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
            D   Q   A L A        ++    T N ++  F  L   +  +             
Sbjct: 586 -DKAWQWYQAMLQA-------GLRPNVPTCNSLLSTF--LRVHRMSEA------------ 623

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV----AHG 684
              + Q M  L + P++ T++ +L+ C+   S  D          F  Q+  V    AH 
Sbjct: 624 -YNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMG--------FCGQLMAVSGHPAHM 674

Query: 685 LLM----------GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
            L+            RD++     +  D +   D  +     +A+ D L   G K  A  
Sbjct: 675 FLLKMPPAGPDGQKVRDHV----SNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGS 730

Query: 735 VVLEGKRRQVW-----ENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLL 789
           V      + V+     E  +S   ++LH+MS G A   +   L      +    + P  +
Sbjct: 731 VWEVAAGKNVYPDALREKSYSYWLINLHVMSEGTAVIALSRTLAWFRKQMLVSGDCPSRI 790

Query: 790 SILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRES 846
            I+TGWG+ S+V G   +R+AVE LL     PF+  N N G F+ +G  + +WL ES
Sbjct: 791 DIVTGWGRRSRVTGTSMVRQAVEELLNIFNFPFFTENGNSGCFVGSGEPLKNWLLES 847



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 163/306 (53%), Gaps = 2/306 (0%)

Query: 247 AISVFNSMKRY-NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A+  F  +KR    K +  TY  ++   G+    F  + ++ D+M+R+G +P+ +T+N L
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK-QFGEINKLLDEMVRDGCKPNTVTYNRL 400

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    R    + A N+FN+M   G + D  TY TL+D   K   +D+A ++   M    +
Sbjct: 401 IHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGL 460

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           SP+  TYS +I+   KAG L  A  +F EM   G   + V++N +++++AK   +E AL 
Sbjct: 461 SPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALK 520

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + ++M+++G + D VTY+ ++   G  G  +E   +F +M+     P+   Y  L+D++ 
Sbjct: 521 LYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWG 580

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G   +A Q ++   QAGL+ +V   ++L+    +   +  A +LL  M   G+ P++ 
Sbjct: 581 KAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQ 640

Query: 546 TYNSII 551
           TY  ++
Sbjct: 641 TYTLLL 646



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 167/357 (46%), Gaps = 23/357 (6%)

Query: 125 AEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVK 184
           AEEALH+   F  D      +LK+        D+Y      LG           F + +K
Sbjct: 313 AEEALHNF-GFRMDAYQANQVLKQM-------DNYA---NALG-----------FFYWLK 350

Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
           R+      G   + M+  LGR  +      + +  + +G       ++ LI +YGR+ Y 
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           +EA++VFN M+    +P+ VTY  +ID   K G      ++++  M   G+ PD  T++ 
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGF-LDIAMDMYQRMQEAGLSPDTFTYSV 469

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           ++    + G   AA  LF EMV +G   ++ T+N ++    K    + A ++  +M    
Sbjct: 470 IINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAG 529

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
             P+ VTYS +++     G L++A  +F+EM+      D   Y  ++ ++ K G  ++A 
Sbjct: 530 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAW 589

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
              + M  +G+R +  T N+LL  + +  +  E   + + M A  + P+L TY+ L+
Sbjct: 590 QWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 130/299 (43%), Gaps = 1/299 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I I  + G +D+A ++++     G     + +S +I+  G++G+   A  +F  M    
Sbjct: 435 LIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG 494

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             PNLVT+N +I    K   +++  ++++ DM   G QPD++T++ ++ V    G  E A
Sbjct: 495 CTPNLVTFNIMIALHAKA-RNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEA 553

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +F EM  +    D   Y  L+D   K   +D A++    M    + PNV T ++++  
Sbjct: 554 EGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLST 613

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           + +  R+ +A N+   M  LG+     +Y  +LS         +     + M  SG    
Sbjct: 614 FLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSGHPAH 673

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
                    G   Q   D V    + M ++           ++D   K GL +EA  ++
Sbjct: 674 MFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVW 732


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 202/403 (50%), Gaps = 36/403 (8%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++  A  +F   +  G+   V ++S +I+   +SG    A+ +   M+    KPNLV Y
Sbjct: 176 GEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAY 235

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA-------- 317
             +ID+  K  +     +++  +M+  G+ PD +T++++L   CS G L EA        
Sbjct: 236 TTIIDSLCKDTL-VNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMV 294

Query: 318 --------------------------ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
                                     AR +F  M  +G + + +TYN L+D  C   QMD
Sbjct: 295 GRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMD 354

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A +++  M  K  +P V +Y+ +I+GY K  RLD+A ++  EM    +  D V+Y+T++
Sbjct: 355 EAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLM 414

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
               ++GR +EAL + KEM SSG+  D +TY+ LL G  K G  DE  ++ + M+   + 
Sbjct: 415 QGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIE 474

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P+++ Y+ LI+     G  + A ++F +    G++  +  Y+ +I  L K GL + A  L
Sbjct: 475 PDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYEL 534

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
             +M  +G  PN  +YN II  F ++  +   +  ++  +GK+
Sbjct: 535 FRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKR 577



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 200/405 (49%), Gaps = 27/405 (6%)

Query: 184 KREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGY 243
           KR   +N+ G L++  ISI       D A   F   L      +V  F   + +  +   
Sbjct: 55  KRSLPQNNGGFLSNNSISI-------DDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQ 107

Query: 244 CQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
               +S+ N M  + +  N+ + N +I+  C    V F   + +   M + G+QPD ITF
Sbjct: 108 YSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVF--AISVLGKMFKLGIQPDAITF 165

Query: 303 NSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           N+L+   C  G + EA   LFNEMV RG   D+ +Y+T+++ +CK     +A +++ +M 
Sbjct: 166 NTLINGRCIEGEIKEAV-GLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKME 224

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            K   PN+V Y+T+ID   K   ++DA+++ SEM   GI  D V+Y+T+L  +  LG   
Sbjct: 225 EKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLN 284

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           EA ++  EM    +  + VT+  L+ G  K+G   E R +FE M      PN  TY+ L+
Sbjct: 285 EATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALM 344

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           D Y       EA ++       G    V  Y+ LI+  CK   ++ A SLL EM+++ + 
Sbjct: 345 DGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELT 404

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCS 585
           P+ VTY++++          C V       G+ +E+ NL   MCS
Sbjct: 405 PDTVTYSTLMQGL-------CQV-------GRPQEALNLFKEMCS 435



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 159/353 (45%), Gaps = 40/353 (11%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           LG ++ A  +F   +          F+ L+    + G   EA  VF +M +   +PN  T
Sbjct: 280 LGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYT 339

Query: 266 YNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFN 323
           YNA++D  C    +D     ++ D M+  G  P   ++N L+   C R  L EA ++L  
Sbjct: 340 YNALMDGYCLNNQMD--EAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEA-KSLLV 396

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EM  + +  D  TY+TL+  +C+  +   A  +  EM +  + P+++TYST++DG  K G
Sbjct: 397 EMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHG 456

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            LD+AL +   M                                   + S I  D V YN
Sbjct: 457 HLDEALKLLKSM-----------------------------------QESKIEPDIVLYN 481

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+ G    GK +  + +F ++ AD + P + TY+ +I    K GL  EA ++FR+ +  
Sbjct: 482 ILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDD 541

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           G   +   Y+ +I    +N    +A+ L+DEM  +    +  T+  ++D   R
Sbjct: 542 GFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESR 594



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 143/354 (40%), Gaps = 68/354 (19%)

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +DDAL  F  M  +      V +   L   AK  ++   + +C +M+  G+  +  + N 
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+    +         +  +M    + P+ +T++TLI+     G  KEA+ +F E  + G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
            + DV+ YS +I+ LCK+G    A+ LL +M ++G +PN+V Y +I              
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTI-------------- 238

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                          +D++C   D  V +A             L++E   +G        
Sbjct: 239 ---------------IDSLCK--DTLVNDAM-----------DLLSEMVDRG-------- 262

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG 684
                           I P+VVT+S IL+         +A++L  E+   +     V   
Sbjct: 263 ----------------IPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFT 306

Query: 685 LLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVV 736
           +L+    ++ +  +A  +F+ +    +   +  YNAL D      Q   AQ V+
Sbjct: 307 ILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVL 360


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 210/396 (53%), Gaps = 13/396 (3%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
           G    AIQCF  +  R+ R +   +    ++  + +L         +   L+ G+   VY
Sbjct: 184 GFIPDAIQCFRLS--RKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVY 241

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD----FKHVV 284
            F+ L++ + + G   +A  VF+ + + +L+P +V++N +I+  C  G +D     KH +
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           E      ++  +PD  T+++L+    +    + A  LF+EM  RG+  +   + TL+   
Sbjct: 302 E------KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
            +  ++DL  E   +M +K + P++V Y+T+++G+ K G L  A N+   M   G+  D+
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           ++Y T++  + + G  E AL + KEM+ +GI  D V ++AL+ G  K+G+  +  R   +
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    + P+ +TY+ ++D + K G  +   ++ +E +  G    VV Y+ L++ LCK G 
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           +++A  LLD M   G+ P+ +TYN++++   R A +
Sbjct: 536 MKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANS 571



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 160/311 (51%), Gaps = 10/311 (3%)

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           NV  ++ +++ + K G + DA  +F E+    +    VS+NT+++ Y K+G  +E   + 
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
            +ME S  R D  TY+AL+    K+ K D    +F++M    + PN + ++TLI  +S+ 
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G      + +++    GL+ D+VLY+ L++  CKNG + +A +++D M + G+RP+ +TY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418

Query: 548 NSIIDAFGRSATTECTV------DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
            ++ID F R    E  +      D    +L +   SA +  MC +    V +A R   ++
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE--GRVIDAERALREM 476

Query: 602 IKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           ++  G    +       +  C++ +      + ++M      P+VVT++ +LN   +   
Sbjct: 477 LRA-GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535

Query: 661 FEDASMLLEEL 671
            ++A MLL+ +
Sbjct: 536 MKNADMLLDAM 546


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 187/352 (53%), Gaps = 6/352 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G +DLA N+            V  F+ +I +  +  + + A+ +F  M+   ++PN
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +VTYN++I+  C  G   +     +  +ML   + P+ +TFN+L+    + G    A  L
Sbjct: 293 VVTYNSLINCLCNYG--RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             EM+ R ID D  TYN L++  C   ++D A ++   M +K+  PN+ TY+T+I+G+ K
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
             R++D + +F EM   G+  + V+Y T++  + + G  + A +V K+M S+ +  D +T
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y+ LL G    GK D    +F+ ++   +  N+  Y+T+I+   K G   EA  +F    
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL- 529

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
              +K DVV Y+ +I  LC   L++ A  L  +M ++G  PN  TYN++I A
Sbjct: 530 --SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 187/357 (52%), Gaps = 3/357 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++S + ++ K +L  ++ E     G  + +Y +S  I+ + R      A++V   M +  
Sbjct: 89  LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            +P++VT +++++  C    +     V + D M+  G +PD  TF +L+           
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRI--SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  L ++MV RG   D+ TY T+++ +CK   +DLA  ++ +M A  I  NVV ++T+ID
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
              K   ++ A+++F+EM+  GI  + V+YN++++     GR+ +A  +   M    I  
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + VT+NAL+  + K+GK  E  ++ E+M    + P+ +TY+ LI+ +       EA Q+F
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +         ++  Y+ LI+  CK   VE  V L  EM++ G+  N VTY +II  F
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 192/362 (53%), Gaps = 15/362 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S  I+   R  ++ LA  +    +  GY   +   S+L++ Y  S    +A+++ + M  
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKH-----VVEIFDDMLRNGVQPDRITFNSLL-AVCS 310
              KP+  T+  +I         F H      V + D M++ G QPD +T+ +++  +C 
Sbjct: 182 MGYKPDTFTFTTLIHGL------FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           RG + + A NL N+M    I  ++  +NT++D++CK   +++A ++  EM  K I PNVV
Sbjct: 236 RGDI-DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TY+++I+     GR  DA  + S M    I  + V++N ++  + K G+  EA  + +EM
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA-DCVSPNLLTYSTLIDVYSKGGL 489
               I  D +TYN L+ G+    + DE ++MF+ M + DC+ PN+ TY+TLI+ + K   
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL-PNIQTYNTLINGFCKCKR 413

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
            ++ +++FRE  Q GL  + V Y+ +I    + G  +SA  +  +M    +  +++TY+ 
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473

Query: 550 II 551
           ++
Sbjct: 474 LL 475



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 222/460 (48%), Gaps = 17/460 (3%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L  + KVD A ++F   +      ++  F+ L+SA  +    +  IS+   M+   +  +
Sbjct: 58  LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           L TY+  I+  C +  +     + +   M++ G +PD +T +SLL           A  L
Sbjct: 118 LYTYSIFINCFCRRSQLSL--ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            ++MV  G   D FT+ TL+  +    +   A  ++ +M  +   P++VTY T+++G  K
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G +D ALN+ ++M+   I  + V +NT++    K    E A+ +  EME+ GIR + VT
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN+L+      G++ +  R+   M    ++PN++T++ LID + K G   EA ++  E  
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           Q  +  D + Y+ LI+  C +  ++ A  +   M  +   PN+ TYN++I+ F +    E
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415

Query: 562 CTVDDVE--RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
              D VE  R++ ++    N     +   +   +AG  D+  + VF Q+V+ +       
Sbjct: 416 ---DGVELFREMSQRGLVGN-TVTYTTIIQGFFQAGDCDSAQM-VFKQMVSNRVPTDIMT 470

Query: 620 NRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAIL 652
                  LC  G       +F+ + K +++ N+  ++ ++
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 143/291 (49%), Gaps = 12/291 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L N G WS A +  +  +  E++ N      +A+I    + GK+  A+ + E 
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNML--EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +          ++ LI+ +       EA  +F  M   +  PN+ TYN +I+    G  
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN----GFC 409

Query: 279 DFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
             K V   VE+F +M + G+  + +T+ +++    + G  ++A+ +F +MV   +  DI 
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TY+ LL  +C   ++D A  I   +    +  N+  Y+TMI+G  KAG++ +A ++F   
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS- 528

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
             L I  D V+YNT++S        +EA  + ++M+  G   ++ TYN L+
Sbjct: 529 --LSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 8/189 (4%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G  D A+ +F+  ++      +  +S L+      G    A+ +F  +++  ++ N+  Y
Sbjct: 447 GDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIY 506

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEM 325
           N +I+   K G     V E +D      ++PD +T+N++++ +CS+  L E A +LF +M
Sbjct: 507 NTMIEGMCKAG----KVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQE-ADDLFRKM 561

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              G   +  TYNTL+ A  +      + E++ EM +     +  T S ++      GRL
Sbjct: 562 KEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRL 620

Query: 386 DDA-LNMFS 393
           D + LNM S
Sbjct: 621 DKSFLNMLS 629


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 143/541 (26%), Positives = 256/541 (47%), Gaps = 43/541 (7%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKV 209
           CG ++  F  L+R      +  +  +  AF + R      +G L S  A  S+LG L K+
Sbjct: 44  CGTNNLVFDLLIRTYVQARKLREGTE--AFRILRS-----KGYLVSINACNSLLGGLVKI 96

Query: 210 D---LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           D   LA  +    +  G    VY  + +++A  + G   +  S  + M+   +  ++VTY
Sbjct: 97  DWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTY 156

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N +I A  + G+  +   EI + M   G++P   T+N+++    + G +  A+ +  EM+
Sbjct: 157 NTLIGAYCREGL-LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 215

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
           + G+  D  TYNTLL   C+      A EI  EM  + + P++V++S++I  +++   LD
Sbjct: 216 NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLD 275

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            AL  F +MK  G+  D V Y  ++  Y + G   EAL +  EM   G   D + YN +L
Sbjct: 276 QALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTIL 335

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G  K+    +  ++F++M      P+  T++TLI  + + G   +A+ +F    Q  +K
Sbjct: 336 NGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIK 395

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            D+V Y+ LID  CK G +E A  L D M    I PN +TY  +I+A+       C+V  
Sbjct: 396 PDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY-------CSVGH 448

Query: 567 VER-----DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK---- 617
           V       D+  +K        C+   K    +G + ++  +  G+++A+          
Sbjct: 449 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDS-SKADEFLGRMIAKGVAPDHISYN 507

Query: 618 -------KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                  +E+   +  L I     KM K  + P+++T++ ++N   R    ++A ++L +
Sbjct: 508 TLINGFVREDNMDKAFLWI----NKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRK 563

Query: 671 L 671
           +
Sbjct: 564 M 564



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 181/342 (52%), Gaps = 1/342 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           AK IF   L +G    + +FS+LI+ + R+ +  +A+  F  MK++ L P+ V Y  ++ 
Sbjct: 242 AKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMH 301

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              + G +    ++I D+ML  G   D I +N++L    +  +   A  LF+EMV RG  
Sbjct: 302 GYCRNG-NMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGAL 360

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D +T+ TL+   C+   M  A  +   M  +NI P++V Y+T+IDG+ K G ++ A  +
Sbjct: 361 PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASEL 420

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           +  M    I  + ++Y  +++ Y  +G   EA  +   M   GI+   VT N ++ GY +
Sbjct: 421 WDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCR 480

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G   +      +M A  V+P+ ++Y+TLI+ + +     +A     + ++ GL  D++ 
Sbjct: 481 SGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIIT 540

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           Y+ +++  C+ G ++ A  +L +M ++GI P+  TY ++I+ 
Sbjct: 541 YNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALING 582



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 193/446 (43%), Gaps = 70/446 (15%)

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           + GV    VVE     +      + + F+ L+    +          F  +  +G    I
Sbjct: 24  RSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSI 83

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
              N+LL  + K   ++LA+E+  E+    I  NV T + M++   K G+ DD  +  SE
Sbjct: 84  NACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSE 143

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M+  GI  D V+YNT++  Y + G  EEA  +   M   G++    TYNA++ G  K+G+
Sbjct: 144 MEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGR 203

Query: 455 Y-----------------------------------DEVRRMFEQMKADCVSPNLLTYST 479
           Y                                    E + +F +M    V P+L+++S+
Sbjct: 204 YARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSS 263

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LI V+S+     +A+  FR+ K+ GL  D V+Y+ L+   C+NG +  A+ + DEM ++G
Sbjct: 264 LIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG 323

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
              +V+ YN+I++                  L K+K   + D +    D+ V+     D 
Sbjct: 324 CVLDVIAYNTILNG-----------------LCKEKMLTDADKLF---DEMVERGALPD- 362

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
                F  L+      G             L +F  M +  IKP++V ++ +++   +  
Sbjct: 363 --FYTFTTLIHGHCQDGNMTKA--------LSLFGTMTQRNIKPDIVAYNTLIDGFCKVG 412

Query: 660 SFEDASMLLEEL---RLFDNQV-YGV 681
             E AS L + +   ++F N + YG+
Sbjct: 413 EMEKASELWDGMISRKIFPNHITYGI 438


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 205/413 (49%), Gaps = 19/413 (4%)

Query: 163 LRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE 222
           LR L  RGE   A++                   +A+I  L   G+   A+ +   +   
Sbjct: 74  LRVLVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVLAAS--- 130

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
             G  V  ++A+++ Y  +G    A  +   M    ++P+  TYN +I   CG+G     
Sbjct: 131 --GPDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTS-- 183

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           + + + +DM R G  PD +T+  LL A C R G ++ A  L +EM  +G   DI TYN +
Sbjct: 184 NALAVLEDMFRRGCLPDVVTYTILLEATCKRSG-YKQAMKLLDEMHDKGCAPDIVTYNVV 242

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           L+ IC+  +++ A E +  +P+    PN V+Y+ ++ G   A R +DA  +  EM   G 
Sbjct: 243 LNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGC 302

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             + V++N ++S   + G  E A+ V ++M   G   ++++YN LL  + KQ K  +   
Sbjct: 303 PPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAME 362

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
             E M +    P++++Y+TL+    + G    A+++  + K  G    ++ Y+ +ID L 
Sbjct: 363 FVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLT 422

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR------SATTECTVDDV 567
           K G  + A+ LLDEMT +G++P+++TY++I     R      +  T C V D+
Sbjct: 423 KAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDM 475



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 179/356 (50%), Gaps = 6/356 (1%)

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY-GRSGYCQEAISVFNSMKRYNLK 260
           + GR G+   A  + E     G    V  ++ L+ A   RSGY ++A+ + + M      
Sbjct: 176 LCGR-GRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGY-KQAMKLLDEMHDKGCA 233

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           P++VTYN V++  C +G V+    +E   ++   G +P+ +++N +L        WE A 
Sbjct: 234 PDIVTYNVVLNGICQEGRVE--DAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAE 291

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            L  EM H+G   ++ T+N L+  +C+   ++ A E++ +MP    +PN ++Y+ ++  +
Sbjct: 292 KLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAF 351

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K  ++  A+     M   G   D VSYNT+L+   + G  + A+ +  +++  G     
Sbjct: 352 CKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVL 411

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           ++YN ++ G  K GK  E   + ++M +  + P+++TYST+     +    +EA++ F +
Sbjct: 412 ISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCK 471

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            +  G++    LY+A++  LCK     +A+ L   M   G  PN  TY  +++   
Sbjct: 472 VQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLA 527



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 182/394 (46%), Gaps = 56/394 (14%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-----SAMISILGRLGKV 209
           D YT+  L+R L  RG  S A+       +R       G L      + ++    +    
Sbjct: 165 DAYTYNTLIRGLCGRGRTSNALAVLEDMFRR-------GCLPDVVTYTILLEATCKRSGY 217

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
             A  + +   ++G    +  ++ +++   + G  ++A+    ++  Y  +PN V+YN V
Sbjct: 218 KQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIV 277

Query: 270 IDACGKG---GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM- 325
           +    KG      ++   ++ ++M   G  P+ +TFN L++   R GL E A  +  +M 
Sbjct: 278 L----KGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMP 333

Query: 326 ----------------------------------VHRGIDQDIFTYNTLLDAICKGAQMD 351
                                             V RG   DI +YNTLL A+C+  ++D
Sbjct: 334 QYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVD 393

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
           +A E++ ++  K  SP +++Y+T+IDG  KAG+  +AL +  EM   G+  D ++Y+T+ 
Sbjct: 394 VAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIA 453

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           S   +  R EEA+    +++  GIR  A  YNA+L G  K+ +      +F  M +    
Sbjct: 454 SGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCM 513

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           PN  TY+ L++  +  GL KEA ++F +    G+
Sbjct: 514 PNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 167/346 (48%), Gaps = 27/346 (7%)

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D+  YN ++   C   Q+D A  ++A+MP   + P+  TY+T+I G    GR  +AL + 
Sbjct: 133 DVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVL 189

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            +M   G   D V+Y  +L    K   +++A+ +  EM   G   D VTYN +L G  ++
Sbjct: 190 EDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQE 249

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G+ ++     + + +    PN ++Y+ ++        +++A ++  E    G   +VV +
Sbjct: 250 GRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTF 309

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE---- 568
           + LI  LC+ GLVE A+ +L++M + G  PN ++YN ++ AF +       ++ VE    
Sbjct: 310 NMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVS 369

Query: 569 RDLGKQKESAN--LDAMCSQDDKDV------QEAGRTDNQIIKVFGQLV--AEKAGQGKK 618
           R       S N  L A+C   + DV      Q   +  + ++  +  ++    KAG+ K+
Sbjct: 370 RGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKE 429

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
                      L +  +M    ++P+++T+S I +   R +  E+A
Sbjct: 430 A----------LELLDEMTSKGLQPDIITYSTIASGLCREDRIEEA 465


>gi|168061839|ref|XP_001782893.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665615|gb|EDQ52293.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 713

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 168/691 (24%), Positives = 303/691 (43%), Gaps = 63/691 (9%)

Query: 176 IQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALI 235
           IQ F +     + K D+  +   +I++L    ++++A+ +FE  +  G   +   +  L+
Sbjct: 7   IQVFQWMQALPDLKPDE-LVYRTIINVLINARRMNVAEAVFEEFVKSGMSPSHDDYVILM 65

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV-DFKHVVEIFDDMLRNG 294
           S Y + G  Q  I +   M+   + P +  YN +++ C +    D   ++E    ++  G
Sbjct: 66  SGYTKCGSLQRGIGILQKMREAGIHPQVSAYNVILEGCTRSTRGDINGMMEAHRILMDMG 125

Query: 295 VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAF 354
           +Q D +TFN ++   +R G        +  M    I  D+ T + L++A  +        
Sbjct: 126 LQQDSVTFNIIMNALNRVGRIRDVDRYWALMRMGRIVPDLTTCSILINAFGRARDWHKVD 185

Query: 355 EIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF-------LG---IGLDR 404
            ++AEM    I  +++ Y+++I  Y KAG   +   +   ++        LG   +  D 
Sbjct: 186 LVLAEMETYGIKADLMIYNSLISVYGKAGLFYEVELVVKSLRAEIARREDLGNSSLAFDL 245

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD-EVRRMFE 463
           V+YNT+L +Y K GR ++ +    EM+ SG++ D +T+++L+  YGK   YD EV  +F 
Sbjct: 246 VTYNTLLDVYGKAGRLDDVIYWFGEMKKSGVQPDVLTFDSLVNAYGKASHYDGEVLELFR 305

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +        +L+ Y+TL+ ++ KGG Y +A +I  + K AG       Y++LI A  +  
Sbjct: 306 KYN---YKSDLVFYNTLLFMFGKGGHYADAWKILEDMKAAGFMPTSETYNSLILAFGRGS 362

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
             + A + L+ M   G++P   +++ +++A+  S      +   E+ + K KE   +  +
Sbjct: 363 QWQEAENTLERMKANGVKPVAQSFSFLLEAYSLSG----QIPKGEKLIVKMKEENLIYGI 418

Query: 584 CSQDD--KDVQEAGRTDNQIIKVFG--QLVAEKAGQGK---------KENRCRQEILCIL 630
              +   +    AG     II+ +   Q    K  Q           KEN   +      
Sbjct: 419 AGHNSLLRFYMRAGDI-GSIIQTYETCQTRGPKPNQSSFVPMIEALTKENTVDER---FW 474

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----------LFDNQVYG 680
           G+ Q +       +     A+L+A  RC    DA  LL  L+          LF+     
Sbjct: 475 GIAQDLENAPFDVHFAIHGALLSALGRCGQSPDADRLLGILKRLGCSPDICNLFEEG--E 532

Query: 681 VAHGLLMGYRDNIWVQALSLFD--EVKLMDSSTASAFYNALTDMLWHFGQK-RGAQLVVL 737
            A   L G  +  W +  +LF+  E + ++      F+NAL D LW F  K R  ++  L
Sbjct: 533 AAQSKLSG--EEAWKRLATLFNSLEQEGVNMEAERNFHNALIDALWRFDYKLRALKVTEL 590

Query: 738 E------GKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSI 791
                  G     W++ WS   LD+    +GAA+ ++  WL  I   +  G ++P  + I
Sbjct: 591 SVSLGVFGSNVCQWKDCWS---LDVRFAGTGAAQILLLTWLSGIRQAIKSGEKMPSKVKI 647

Query: 792 LTGWGKHSKVVGDGALRRAVEVLLTGMGAPF 822
           L  W    +   +   R  V   L  + APF
Sbjct: 648 LLAWEWQLRTGENWGARDGVSAHLNALKAPF 678


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 234/489 (47%), Gaps = 46/489 (9%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V A+S +I  + + G   +A  +F  M +  + P+ VTY++V+ A C    +D       
Sbjct: 219 VVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEA--F 276

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M+  GV P+  T+N+L+   S  G W+ A  +F EM    I  D+ T + L+ ++CK
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A ++   M  K  +PNV +Y+ M++GYA  G L D  ++F  M   GI  D  +
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 396

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +N ++  YA  G  ++A+++  EM   G++ D VTY  ++    + GK D+    F QM 
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V+P+   Y  LI  +   G   +A ++  E    G+  D+V +S++I+ LCK G V 
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 516

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A ++ D     G+ P  V Y+ ++D +       C V  +E+ L         DAM S 
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGY-------CLVGKMEKAL------RVFDAMVS- 562

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
                  AG   N +  V+G LV      G+ +          L +F++M +  IKP+ +
Sbjct: 563 -------AGIEPNDV--VYGTLVNGYCKIGRIDEG--------LSLFREMLQKGIKPSTI 605

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG------LLMG-YRDNIWVQALS 699
            ++ I++       FE    +  +++  +    G+A        +L G +++  + +A+ 
Sbjct: 606 LYNIIIDGL-----FEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIF 660

Query: 700 LFDEVKLMD 708
           LF E++ M+
Sbjct: 661 LFKELRAMN 669



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 224/505 (44%), Gaps = 83/505 (16%)

Query: 118 STRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQ 177
           S  H++    A+    AF R  V+ G +   +         Y  L+    + G+W +A++
Sbjct: 259 SVVHALCKARAMDKAEAFLRQMVNKGVLPNNWT--------YNNLIYGYSSTGQWKEAVR 310

Query: 178 CFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETA------------------ 219
            F   ++R     D   L+  M S L + GK+  A+++F+T                   
Sbjct: 311 VFK-EMRRHSILPDVVTLSMLMGS-LCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNG 368

Query: 220 -----------------LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
                            L +G    +Y F+ LI AY   G   +A+ +FN M+ + +KP+
Sbjct: 369 YATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 428

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA--- 317
           +VTY  VI A C  G +D    +E F+ M+  GV PD+  ++ L+   C+ G L +A   
Sbjct: 429 VVTYRTVIAALCRIGKMD--DAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486

Query: 318 -------------------------------ARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
                                          A+N+F+  V+ G+      Y+ L+D  C 
Sbjct: 487 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCL 546

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +M+ A  +   M +  I PN V Y T+++GY K GR+D+ L++F EM   GI    + 
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN ++    + GR   A +   EM  SGI  +  TYN +L G  K   +DE   +F++++
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELR 666

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           A  V  N++T +T+I    +    +EA  +F    ++GL   VV YS +I  L K GLVE
Sbjct: 667 AMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVE 726

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSII 551
            A  +   M   G  P+    N ++
Sbjct: 727 EAEDMFSSMQNAGCEPDSRLLNHVV 751



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 232/479 (48%), Gaps = 40/479 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S+++  L +   +D A+      +N+G     + ++ LI  Y  +G  +EA+ VF  M+R
Sbjct: 258 SSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 317

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           +++ P++VT + ++ +  K G   K   ++FD M   G  P+  ++  +L   +  G   
Sbjct: 318 HSILPDVVTLSMLMGSLCKYG-KIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLV 376

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
              +LF+ M+  GI  DI+T+N L+ A      +D A  I  EM    + P+VVTY T+I
Sbjct: 377 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
               + G++DDA+  F++M   G+  D+ +Y+ ++  +   G   +A  +  E+ ++G+ 
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D V +++++    K G+  + + +F+      + P  + YS L+D Y   G  ++A+++
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF-- 554
           F     AG++ + V+Y  L++  CK G ++  +SL  EM ++GI+P+ + YN IID    
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 616

Query: 555 -GRSATTECTVDDV-ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
            GR+   +    ++ E  +   K + N+                                
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMNKCTYNI-------------------------------- 644

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             +G  +NRC  E + +   F+++  + +K N++T + ++    +    E+A  L   +
Sbjct: 645 VLRGLFKNRCFDEAIFL---FKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASI 700



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 147/578 (25%), Positives = 251/578 (43%), Gaps = 95/578 (16%)

Query: 211 LAKNIFETALNEGYGNTV-----YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           LA  +F  A +   G  V     + ++ L+    R+   + A++ F  + R  L+ N++ 
Sbjct: 89  LAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIII 148

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRN----GVQPDRITFNSLL--------------- 306
            N ++    KG  + K   E  D +L      G  PD  +++ LL               
Sbjct: 149 ANHLL----KGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 204

Query: 307 --------AVCS--------------RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
                   AVCS              + G    A +LF EMV RGI  D  TY++++ A+
Sbjct: 205 LRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHAL 264

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK   MD A   + +M  K + PN  TY+ +I GY+  G+  +A+ +F EM+   I  D 
Sbjct: 265 CKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDV 324

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V+ + ++    K G+ +EA  V   M   G   +  +Y  +L GY  +G   ++  +F+ 
Sbjct: 325 VTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDL 384

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M  D ++P++ T++ LI  Y+  G+  +AM IF E +  G+K DVV Y  +I ALC+ G 
Sbjct: 385 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 444

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           ++ A+   ++M  +G+ P+   Y+ +I  F       CT       L K KE  + + M 
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGF-------CT----HGSLLKAKELIS-EIMN 492

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
           +    D+       N + K+   + A+                    +F     + + P 
Sbjct: 493 NGMHLDIVFFSSIINNLCKLGRVMDAQN-------------------IFDLTVNVGLHPT 533

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG------VAHGLLM-GY-RDNIWVQ 696
            V +S +++        E A      LR+FD  V        V +G L+ GY +     +
Sbjct: 534 AVVYSMLMDGYCLVGKMEKA------LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587

Query: 697 ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
            LSLF E+       ++  YN + D L+  G+   A++
Sbjct: 588 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 191/405 (47%), Gaps = 5/405 (1%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           D YTF  L++   N G   KA+    F   R+            +I+ L R+GK+D A  
Sbjct: 393 DIYTFNVLIKAYANCGMLDKAM--IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 450

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
            F   +++G     YA+  LI  +   G   +A  + + +    +  ++V ++++I+   
Sbjct: 451 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 510

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K G        IFD  +  G+ P  + ++ L+      G  E A  +F+ MV  GI+ + 
Sbjct: 511 KLG-RVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPND 569

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
             Y TL++  CK  ++D    +  EM  K I P+ + Y+ +IDG  +AGR   A   F E
Sbjct: 570 VVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 629

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   GI +++ +YN VL    K   F+EA+ + KE+ +  ++ + +T N ++ G  +  +
Sbjct: 630 MTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRR 689

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            +E + +F  +    + P ++TYS +I    K GL +EA  +F   + AG + D  L + 
Sbjct: 690 VEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 749

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
           ++  L K   +  A + L ++ +       +T   ++D F    T
Sbjct: 750 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGT 794


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 194/397 (48%), Gaps = 6/397 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT +L+ L     W    + FA  +++    N+       ++    R G V+ A  + E 
Sbjct: 284 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNE--VTFDMLVRFFCRGGMVERAIQVLEQ 341

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G        + +I+   + G   +A    N+M  Y   P+ ++Y  V+    +   
Sbjct: 342 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAE- 400

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            ++   E+  +M+R    P+ +TFN+ + +  + GL E A  L  +M   G + +I TYN
Sbjct: 401 RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYN 460

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L++  C   ++D A E+   MP K   PN +TY+T++ G   A RLD A  + +EM   
Sbjct: 461 ALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQK 517

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
               + V++N ++S + + G  +EA+ + ++M   G   + +TYN LL G  K    +E 
Sbjct: 518 DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEA 577

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +   + ++ VSP+++TYS++I V S+    +EA+++F   +  G++   V+Y+ ++ A
Sbjct: 578 LELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLA 637

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           LCK    + A+     M   G  PN +TY ++I+   
Sbjct: 638 LCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLA 674



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 185/362 (51%), Gaps = 8/362 (2%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L + +I  L R G+   A  +   A   G    V+A++ L++ Y R G    A  +  SM
Sbjct: 111 LCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM 170

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
               + P+  TY  +I   C +G V     + + DDML  G QP  +T+  LL AVC   
Sbjct: 171 P---VAPDAYTYTPIIRGLCDRGRVG--EALSLLDDMLHRGCQPSVVTYTVLLEAVCKST 225

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  +A   + +EM  +G   +I TYN +++ +C+  ++D A E +  + +    P+ V+Y
Sbjct: 226 GFGQAME-VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSY 284

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T++ G   A R +D   +F+EM       + V+++ ++  + + G  E A+ V ++M  
Sbjct: 285 TTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSG 344

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G   +    N ++    KQG+ D+  +    M +   SP+ ++Y+T++    +   +++
Sbjct: 345 HGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 404

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A ++ +E  +     + V ++  I  LC+ GL+E A  L+++M++ G   N+VTYN++++
Sbjct: 405 AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVN 464

Query: 553 AF 554
            F
Sbjct: 465 GF 466



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/548 (23%), Positives = 242/548 (44%), Gaps = 63/548 (11%)

Query: 160 TFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILG--RLGKVDLAKNIFE 217
           T L+R L  RG  S A    A  ++  ER      + +    + G  R G++D A+ +  
Sbjct: 113 TKLIRNLCRRGRTSDA----ARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIA 168

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
           +          Y ++ +I      G   EA+S+ + M     +P++VTY  +++A  K  
Sbjct: 169 SM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKS- 224

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             F   +E+ D+M   G  P+ +T+N ++    R G  + AR   N +   G   D  +Y
Sbjct: 225 TGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSY 284

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            T+L  +C   + +   E+ AEM  KN  PN VT+  ++  + + G ++ A+ +  +M  
Sbjct: 285 TTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSG 344

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   +    N V++   K GR ++A      M S G   D ++Y  +L G  +  ++++
Sbjct: 345 HGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 404

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            + + ++M      PN +T++T I +  + GL ++A  +  +  + G + ++V Y+AL++
Sbjct: 405 AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVN 464

Query: 518 ALCKNGLVESAVSL--------------------------------LDEMTKEGIRPNVV 545
             C  G V+SA+ L                                L EM ++   PNVV
Sbjct: 465 GFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVV 524

Query: 546 TYNSIIDAFGRSATTECTVDDVERDL--GKQKESANLDAMCSQDDKDV--QEA-----GR 596
           T+N ++  F +    +  ++ VE+ +  G        + +     KD   +EA     G 
Sbjct: 525 TFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGL 584

Query: 597 TDNQI---IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
             N +   I  +  ++    G   +E+R  + I     +F  +  L ++P  V ++ IL 
Sbjct: 585 VSNGVSPDIVTYSSII----GVLSREDRVEEAI----KMFHIVQDLGMRPKAVIYNKILL 636

Query: 654 A-CSRCNS 660
           A C RCN+
Sbjct: 637 ALCKRCNT 644



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 165/336 (49%), Gaps = 6/336 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           F  L+  + R G  + AI V   M  +    N    N VI+  C +G VD     +  ++
Sbjct: 319 FDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD--DAFQFLNN 376

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G  PD I++ ++L    R   WE A+ L  EMV +    +  T+NT +  +C+   
Sbjct: 377 MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 436

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++ A  ++ +M       N+VTY+ +++G+   GR+D AL +F  M       + ++Y T
Sbjct: 437 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTT 493

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +L+      R + A  +  EM       + VT+N L+  + ++G  DE   + EQM    
Sbjct: 494 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 553

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            +PNL+TY+TL+D  +K    +EA+++       G+  D+V YS++I  L +   VE A+
Sbjct: 554 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 613

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
            +   +   G+RP  V YN I+ A  +   T+  +D
Sbjct: 614 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAID 649



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/492 (22%), Positives = 205/492 (41%), Gaps = 77/492 (15%)

Query: 286 IFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           + D     G  PD      L+  +C RG   +AAR +       G   D+F YNTL+   
Sbjct: 96  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAAR-VLRAAERSGTAVDVFAYNTLVAGY 154

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C+  Q+D A  ++A MP   ++P+  TY+ +I G    GR+ +AL++  +M   G     
Sbjct: 155 CRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 211

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF-- 462
           V+Y  +L    K   F +A+ V  EM + G   + VTYN ++ G  ++G+ D+ R     
Sbjct: 212 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 271

Query: 463 ----------------------------------EQMKADCVSPNLLTYSTLIDVYSKGG 488
                                             E M+ +C+ PN +T+  L+  + +GG
Sbjct: 272 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM-PNEVTFDMLVRFFCRGG 330

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
           + + A+Q+  +    G  A+  L + +I+ +CK G V+ A   L+ M   G  P+ ++Y 
Sbjct: 331 MVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYT 390

Query: 549 SIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ- 607
           +++    R+   E       ++L K+    N    C  ++        T N  I +  Q 
Sbjct: 391 TVLKGLCRAERWE-----DAKELLKEMVRKN----CPPNEV-------TFNTFICILCQK 434

Query: 608 --------LVAEKAGQGKKENRCRQEIL----CILG----VFQKMHKLKIKPNVVTFSAI 651
                   L+ + +  G + N      L    C+ G      +  + +  KPN +T++ +
Sbjct: 435 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTL 494

Query: 652 LNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDS 709
           L         + A+ LL E+   D     V   +L+ +  +  +  +A+ L +++     
Sbjct: 495 LTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGC 554

Query: 710 STASAFYNALTD 721
           +     YN L D
Sbjct: 555 TPNLITYNTLLD 566



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 150/304 (49%), Gaps = 6/304 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R  + + AK + +  + +        F+  I    + G  ++A  +   M  +  + N
Sbjct: 396 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVN 455

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +VTYNA+++  C +G VD    +E+F  M     +P+ IT+ +LL         +AA  L
Sbjct: 456 IVTYNALVNGFCVQGRVD--SALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAEL 510

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             EM+ +    ++ T+N L+   C+   MD A E++ +M     +PN++TY+T++DG  K
Sbjct: 511 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITK 570

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
               ++AL +   +   G+  D V+Y++++ + ++  R EEA+ +   ++  G+R  AV 
Sbjct: 571 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVI 630

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN +L    K+   D     F  M ++   PN LTY TLI+  +     KE   + RE  
Sbjct: 631 YNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELC 690

Query: 502 QAGL 505
             G+
Sbjct: 691 SRGV 694



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/355 (21%), Positives = 147/355 (41%), Gaps = 35/355 (9%)

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AAR L +    RG   D++    L+  +C+  +   A  ++        + +V  Y+T++
Sbjct: 93  AAR-LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            GY + G+LD A  + + M    +  D  +Y  ++      GR  EAL +  +M   G +
Sbjct: 152 AGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              VTY  LL    K   + +   + ++M+A   +PN++TY+ +I+   + G   +A + 
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
                  G + D V Y+ ++  LC     E    L  EM ++   PN VT++ ++  F R
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 328

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
               E  +  +E+ +     +AN   +C+     + + GR D+                 
Sbjct: 329 GGMVERAIQVLEQ-MSGHGCAAN-TTLCNIVINTICKQGRVDDA---------------- 370

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                              M      P+ ++++ +L    R   +EDA  LL+E+
Sbjct: 371 -------------FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEM 412


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 193/387 (49%), Gaps = 41/387 (10%)

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           LA +     +  G+   ++ F++LI+ +      +EA+S+ N M    +KP++V Y  +I
Sbjct: 124 LASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTII 183

Query: 271 DA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
           D+ C  G VD  + + +F+ M   G++PD + + SL+      G W  A  L   M+ R 
Sbjct: 184 DSLCKNGHVD--NALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRK 241

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           I  D+ T+N L+DA  K  ++  A E+  EM   +I+PN+ TY+++I+G    GRLD+A 
Sbjct: 242 IKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEAR 301

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            MF  M+  G   D V+Y ++++ + K  + E+A+ +  EM   G+  + +TY  L+ G+
Sbjct: 302 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGF 361

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA---GLK 506
           G  GK +  + +F  M +  V PN+ TY+ L+      G   +A+ IF + ++    G+ 
Sbjct: 362 GLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVP 421

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTK----------------------------- 537
            ++  Y+ L+  LC NG +E A+ +  +M K                             
Sbjct: 422 PNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNL 481

Query: 538 ------EGIRPNVVTYNSIIDAFGRSA 558
                 +G++PNVVTY ++I    R  
Sbjct: 482 FCSLPSKGVKPNVVTYTTMISGLFREG 508



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 171/311 (54%), Gaps = 1/311 (0%)

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
            EA+ +F+ M      P+++ +  +++   K    F  V+ +   +   GV  D  T N 
Sbjct: 53  NEALDLFSHMVESRPLPSIIDFTRLLNVIAKMK-KFDVVINLCKHLQIMGVSNDLYTCNL 111

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L+    +      A +   +++  G + DIFT+ +L++  C G +++ A  ++ +M    
Sbjct: 112 LMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMG 171

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           I P+VV Y+T+ID   K G +D+AL++F++M+  GI  D V Y ++++     GR+ +A 
Sbjct: 172 IKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 231

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
           L+ + M    I+ D +T+NAL+  + K+GK  + + ++ +M    ++PN+ TY++LI+  
Sbjct: 232 LLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGL 291

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
              G   EA Q+F   +  G   DVV Y++LI+  CK   VE A+ +  EM+++G+  N 
Sbjct: 292 CMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNT 351

Query: 545 VTYNSIIDAFG 555
           +TY ++I  FG
Sbjct: 352 ITYTTLIQGFG 362



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 199/411 (48%), Gaps = 17/411 (4%)

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G   + F   +++F  M+ +   P  I F  LL V ++   ++   NL   +   G+  D
Sbjct: 46  GLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSND 105

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++T N L++  C+ +Q  LA   + ++      P++ T++++I+G+    R+++A++M +
Sbjct: 106 LYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVN 165

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           +M  +GI  D V Y T++    K G  + AL +  +ME+ GIR D V Y +L+ G    G
Sbjct: 166 QMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSG 225

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           ++ +   +   M    + P+++T++ LID + K G   +A +++ E  Q  +  ++  Y+
Sbjct: 226 RWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYT 285

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           +LI+ LC  G ++ A  +   M  +G  P+VV Y S+I+ F +    E  +  +  ++ +
Sbjct: 286 SLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAM-KIFYEMSQ 344

Query: 574 QKESANLDAMCSQDDKDVQEAGRTD--NQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
           +  + N     +     +Q  G     N   +VFG +V+       +        LC  G
Sbjct: 345 KGLTGNTITYTTL----IQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNG 400

Query: 632 -------VFQKMHKLKIK---PNVVTFSAILNACSRCNSFEDASMLLEELR 672
                  +F+ M K +I    PN+ T++ +L+        E A M+  +++
Sbjct: 401 KVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQ 451



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 189/352 (53%), Gaps = 10/352 (2%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I  L + G VD A ++F    N G    V  +++L++    SG  ++A  +   M
Sbjct: 178 IYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGM 237

Query: 255 KRYNLKPNLVTYNAVIDACGKGG--VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSR 311
            +  +KP+++T+NA+IDA  K G  +D K   E++++M++  + P+  T+ SL+  +C  
Sbjct: 238 MKRKIKPDVITFNALIDAFVKEGKLLDAK---ELYNEMIQMSIAPNIFTYTSLINGLCME 294

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
           G L EA R +F  M  +G   D+  Y +L++  CK  +++ A +I  EM  K ++ N +T
Sbjct: 295 GRLDEA-RQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTIT 353

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM- 430
           Y+T+I G+   G+ + A  +F  M   G+  +  +YN +L      G+  +AL++ ++M 
Sbjct: 354 YTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQ 413

Query: 431 --ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
             E  G+  +  TYN LL G    GK ++   +F  M+   +   ++TY+ +I    K G
Sbjct: 414 KREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAG 473

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
             K+A+ +F      G+K +VV Y+ +I  L + GL+  A  L  +M ++G+
Sbjct: 474 KVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 157/316 (49%), Gaps = 6/316 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L N G W  A       +KR+ + +      +A+I    + GK+  AK ++  
Sbjct: 214 YTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVIT--FNALIDAFVKEGKLLDAKELYNE 271

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +       ++ +++LI+     G   EA  +F  M+     P++V Y ++I+   K   
Sbjct: 272 MIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCK- 330

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +  ++IF +M + G+  + IT+ +L+      G    A+ +F  MV RG+  +I TYN
Sbjct: 331 KVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYN 390

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNIS---PNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            LL  +C   +++ A  I  +M  + I    PN+ TY+ ++ G    G+L+ AL +F +M
Sbjct: 391 VLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDM 450

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           +   + +  ++Y  ++    K G+ ++AL +   + S G++ + VTY  ++ G  ++G  
Sbjct: 451 QKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLM 510

Query: 456 DEVRRMFEQMKADCVS 471
            E   +F +MK D VS
Sbjct: 511 LEAHVLFRKMKEDGVS 526


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 203/411 (49%), Gaps = 19/411 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRL-------GKVDL 211
           Y  LL  L   G  ++A   F   +++  + N         ++I G L       G +  
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSVIRKGIKPN---------VTIYGILLHGYATEGSLSE 325

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
             +  +  +  G     + F+ +  AY +     EA+ +F+ M++  L PN+VTY A+ID
Sbjct: 326 MHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALID 385

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           A C  G VD    V  F+ M+  G+ PD   F+SL+        WE A  LF E++ +GI
Sbjct: 386 ALCKLGRVD--DAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGI 443

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             D   +NTL+  +C+  ++  A  ++  M    + P+V++Y+T++DG+   GR+D+A  
Sbjct: 444 RLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAK 503

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +   +  +G+  D+V+YNT+L  Y K  R ++A  + +EM   G+  D VTYN +L G  
Sbjct: 504 LLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLF 563

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           + G++ E + ++  M       N+ TY+ +I+   K     EA ++F       L+ D+ 
Sbjct: 564 QTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIF 623

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             + +I AL K G  E A+ L   ++  G+ P+V TY  I +   +  + E
Sbjct: 624 TANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLE 674



 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 188/400 (47%), Gaps = 8/400 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+      G        F   +K   R ND   + S ++  L    +VD A +I   
Sbjct: 95  YTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDT-VIFSQLLKGLCDAKRVDEATDILLR 153

Query: 219 ALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY---NLKPNLVTYNAVIDA-C 273
            + E G    V+++S L+  +      +EA+ + + M      +  PN+VTY  VID  C
Sbjct: 154 RMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLC 213

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
               VD      +F  M+  GV+P+  T+  L+      G W+    +  EM   G+  D
Sbjct: 214 KAQMVD--RAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPD 271

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
            + Y  LLD +CK  +   A  I   +  K I PNV  Y  ++ GYA  G L +  +   
Sbjct: 272 CYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLD 331

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M   G+  D   +N +   YAK    +EA+ +  +M    +  + VTY AL+    K G
Sbjct: 332 LMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLG 391

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           + D+    F QM  + ++P++  +S+L+        +++A ++F E    G++ D V ++
Sbjct: 392 RVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFN 451

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            L+  LC+ G V  A  L+D M + G+RP+V++YN+++D 
Sbjct: 452 TLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDG 491



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 238/533 (44%), Gaps = 82/533 (15%)

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR---SGYCQEAISVFNSMKR---Y 257
           G LG  D A  +F+  L      +V AF+ L++A  R   S   +  +S+FN M R    
Sbjct: 28  GSLGLND-ALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSI 86

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP-DRITFNSLL-AVCSRGGLW 315
            + P+  TY  +I    + G   KH    F  +L+ G +  D + F+ LL  +C    + 
Sbjct: 87  KVAPSSFTYTILIGCFCRMG-RLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVD 145

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK---NISPNVVTY 372
           EA   L   M   G   D+F+Y+ LL   C   + + A E+++ M      + +PNVVTY
Sbjct: 146 EATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTY 205

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T+IDG  KA  +D A  +F  M   G+  +  +Y  ++  Y  +G+++E + + +EM +
Sbjct: 206 TTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMST 265

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID---------- 482
            G++ D   Y  LL    K G+  E R +F+ +    + PN+  Y  L+           
Sbjct: 266 HGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSE 325

Query: 483 -------------------------VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
                                     Y+K  +  EAM IF + +Q  L  ++V Y ALID
Sbjct: 326 MHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALID 385

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER-------- 569
           ALCK G V+ AV   ++M  EG+ P++  ++S++          CTVD  E+        
Sbjct: 386 ALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGL-------CTVDKWEKAEELFFEV 438

Query: 570 -DLGKQKESANLDA-MCSQ-DDKDVQEAGRTDNQIIKV--------FGQLVAEKAGQGKK 618
            D G + ++   +  MC+   +  V EA R  + +++V        +  LV      G+ 
Sbjct: 439 LDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRI 498

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +   +        +   +  + +KP+ VT++ +L+   +    +DA  L  E+
Sbjct: 499 DEAAK--------LLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREM 543



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 206/421 (48%), Gaps = 31/421 (7%)

Query: 159 YTFLLRELGNRGEWSKAIQ-------------CFAFAVKREERKNDQGKLASAMISILGR 205
           YT L+    + G+W + +Q             C+ +AV               ++  L +
Sbjct: 240 YTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAV---------------LLDYLCK 284

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
            G+   A+NIF++ + +G    V  +  L+  Y   G   E  S  + M    + P+   
Sbjct: 285 NGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHI 344

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNE 324
           +N +  A  K  +     + IFD M +  + P+ +T+ +L+ A+C  G + +A    FN+
Sbjct: 345 FNIMFCAYAKKAM-IDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLK-FNQ 402

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+  G+  DIF +++L+  +C   + + A E+  E+  + I  + V ++T++    + GR
Sbjct: 403 MIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGR 462

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           + +A  +   M  +G+  D +SYNT++  +   GR +EA  +   + S G++ D VTYN 
Sbjct: 463 VMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNT 522

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           LL GY K  + D+   +F +M    ++P+++TY+T++    + G + EA +++     + 
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSR 582

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
            + ++  Y+ +I+ LCKN  V+ A  +   +  + ++ ++ T N +I A  +    E  +
Sbjct: 583 TQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAM 642

Query: 565 D 565
           D
Sbjct: 643 D 643



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 149/592 (25%), Positives = 247/592 (41%), Gaps = 68/592 (11%)

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR---NLFNE 324
            + D    G +     +++FD+ML +        FN LL   SR     A+    +LFN 
Sbjct: 20  VIADRAHSGSLGLNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNR 79

Query: 325 MVHR---GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN-VVTYSTMIDGYA 380
           M+      +    FTY  L+   C+  ++   F     +       N  V +S ++ G  
Sbjct: 80  MIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLC 139

Query: 381 KAGRLDDALN-MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI---R 436
            A R+D+A + +   M   G   D  SY+ +L  +    R EEAL +   M   G     
Sbjct: 140 DAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHT 199

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + VTY  ++ G  K    D  + +F+ M    V PN  TY+ LI  Y   G +KE +Q+
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQM 259

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +E    GL+ D  +Y+ L+D LCKNG    A ++ D + ++GI+PNV  Y  ++  +  
Sbjct: 260 LQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYAT 319

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
             +                    L  M S  D  V      D+ I  +     A+KA   
Sbjct: 320 EGS--------------------LSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMID 359

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM---------L 667
           +            + +F KM + ++ PN+VT+ A+++A  +    +DA +         +
Sbjct: 360 EA-----------MHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGM 408

Query: 668 LEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
             ++ +F + VYG+          + W +A  LF EV        + F+N L   L   G
Sbjct: 409 TPDIFVFSSLVYGLC-------TVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREG 461

Query: 728 QKRGAQLVVLEGKRRQVWENVWSESCL-DLHLMSSGAARAMVHAWLLNIHSIVFEGHELP 786
           +   AQ ++    R  V  +V S + L D H ++     A   A LL++  IV  G +  
Sbjct: 462 RVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEA---AKLLDV--IVSIGLKPD 516

Query: 787 KLL--SILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTG 836
           K+   ++L G+ K  ++  D A     E+L+ G+       N  L     TG
Sbjct: 517 KVTYNTLLHGYCKARRI--DDAYSLFREMLMKGLTPDVVTYNTILHGLFQTG 566



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 176/373 (47%), Gaps = 40/373 (10%)

Query: 181 FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           F   R++R +       A+I  L +LG+VD A   F   ++EG    ++ FS+L+     
Sbjct: 365 FDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCT 424

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDR 299
               ++A  +F  +    ++ + V +N ++ + C +G V       + D MLR GV+PD 
Sbjct: 425 VDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRV--MEAQRLIDLMLRVGVRPDV 482

Query: 300 ITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
           I++N+L+   C  G + EAA+ L + +V  G+  D  TYNTLL   CK  ++D A+ +  
Sbjct: 483 ISYNTLVDGHCLTGRIDEAAK-LLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFR 541

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
           EM  K ++P+VVTY+T++ G  + GR  +A  ++  M         ++  T ++IY    
Sbjct: 542 EMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSM---------INSRTQMNIY---- 588

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
                                 TYN ++ G  K    DE  +MF  + +  +  ++ T +
Sbjct: 589 ----------------------TYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTAN 626

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            +I    KGG  ++AM +F      GL  DV  Y  + + L K G +E    L   M + 
Sbjct: 627 IMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEEN 686

Query: 539 GIRPNVVTYNSII 551
           G  PN    N+++
Sbjct: 687 GTAPNSRMLNALV 699



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 161/330 (48%), Gaps = 5/330 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           ++ L+  L    +W KA + F F V  +  + D     + M + L R G+V  A+ + + 
Sbjct: 415 FSSLVYGLCTVDKWEKAEELF-FEVLDQGIRLDTVFFNTLMCN-LCREGRVMEAQRLIDL 472

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            L  G    V +++ L+  +  +G   EA  + + +    LKP+ VTYN ++   C    
Sbjct: 473 MLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARR 532

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D  +   +F +ML  G+ PD +T+N++L    + G +  A+ L+  M++     +I+TY
Sbjct: 533 IDDAY--SLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTY 590

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N +++ +CK   +D AF++   + +K++  ++ T + MI    K GR +DA+++F+ +  
Sbjct: 591 NIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISA 650

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  D  +Y  +     K G  EE   +   ME +G   ++   NAL+     +G  + 
Sbjct: 651 YGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINR 710

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
                 ++     S    T S LI +YS+G
Sbjct: 711 AGAYLSKLDEKNFSLEASTTSMLISIYSRG 740


>gi|42570403|ref|NP_850357.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|330254930|gb|AEC10024.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 683

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 237/483 (49%), Gaps = 42/483 (8%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           ++ +I  + R  +  +A  +F  M++++ KP+  TY+A+I+A G+ G  ++  + + DDM
Sbjct: 14  YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG-QWRWAMNLMDDM 72

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           LR  + P R T+N+L+  C   G W  A  +  +M   G+  D+ T+N +L A   G Q 
Sbjct: 73  LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM--KFLGIGLDRVSYN 408
             A      M    + P+  T++ +I   +K G+   AL++F+ M  K      D V++ 
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           +++ +Y+  G  E    V + M + G++ + V+YNAL+G Y   G       +   +K +
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + P++++Y+ L++ Y +     +A ++F   ++   K +VV Y+ALIDA   NG +  A
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           V +  +M ++GI+PNVV+  +++ A  RS                 K+  N+D + S   
Sbjct: 313 VEIFRQMEQDGIKPNVVSVCTLLAACSRS-----------------KKKVNVDTVLSA-- 353

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
              Q  G   N          A  +  G   N    E+   + ++Q M K K+K + VTF
Sbjct: 354 --AQSRGINLNT--------AAYNSAIGSYINAA--ELEKAIALYQSMRKKKVKADSVTF 401

Query: 649 SAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWV-QALSLFDE 703
           + +++   R + + +A   L+E+         +VY     +L  Y     V +A S+F++
Sbjct: 402 TILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYS---SVLCAYSKQGQVTEAESIFNQ 458

Query: 704 VKL 706
           +K+
Sbjct: 459 MKM 461



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 193/414 (46%), Gaps = 35/414 (8%)

Query: 148 KFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLG 207
           K +   C  +D   ++  L  R  W    +   F +++   K D  +   A+I+  GR G
Sbjct: 2   KIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPD-AETYDALINAHGRAG 60

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           +   A N+ +  L      +   ++ LI+A G SG  +EA+ V   M    + P+LVT+N
Sbjct: 61  QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 120

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            V+ A  K G  +   +  F+ M    V+PD  TFN ++   S+ G    A +LFN M  
Sbjct: 121 IVLSAY-KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 179

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           +              A C+                    P+VVT+++++  Y+  G +++
Sbjct: 180 K-------------RAECR--------------------PDVVTFTSIMHLYSVKGEIEN 206

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
              +F  M   G+  + VSYN ++  YA  G    AL V  +++ +GI  D V+Y  LL 
Sbjct: 207 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 266

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
            YG+  +  + + +F  M+ +   PN++TY+ LID Y   G   EA++IFR+ +Q G+K 
Sbjct: 267 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 326

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +VV    L+ A  ++    +  ++L      GI  N   YNS I ++  +A  E
Sbjct: 327 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 380



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 191/383 (49%), Gaps = 3/383 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCF-AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           +  ++  L   G+ S+A+  F +   KR E + D     S M  +    G+++  + +FE
Sbjct: 154 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM-HLYSVKGEIENCRAVFE 212

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
             + EG    + +++AL+ AY   G    A+SV   +K+  + P++V+Y  ++++ G+  
Sbjct: 213 AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 272

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              K   E+F  M +   +P+ +T+N+L+      G    A  +F +M   GI  ++ + 
Sbjct: 273 QPGK-AKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 331

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TLL A  +  +      +++   ++ I+ N   Y++ I  Y  A  L+ A+ ++  M+ 
Sbjct: 332 CTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK 391

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             +  D V++  ++S   ++ ++ EA+   KEME   I      Y+++L  Y KQG+  E
Sbjct: 392 KKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTE 451

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +F QMK     P+++ Y++++  Y+    + +A ++F E +  G++ D +  SAL+ 
Sbjct: 452 AESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMR 511

Query: 518 ALCKNGLVESAVSLLDEMTKEGI 540
           A  K G   +   L+D M ++ I
Sbjct: 512 AFNKGGQPSNVFVLMDLMREKEI 534



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 196/409 (47%), Gaps = 9/409 (2%)

Query: 171 EWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNT--- 227
           ++SKA+  F   +K  + + D     + +I  L +LG+   A ++F + + E        
Sbjct: 131 QYSKALSYFEL-MKGAKVRPDTTTF-NIIIYCLSKLGQSSQALDLFNS-MREKRAECRPD 187

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  F++++  Y   G  +   +VF +M    LKPN+V+YNA++ A    G+     + + 
Sbjct: 188 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS-GTALSVL 246

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            D+ +NG+ PD +++  LL    R      A+ +F  M       ++ TYN L+DA    
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 306

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             +  A EI  +M    I PNVV+  T++   +++ +  +   + S  +  GI L+  +Y
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 366

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N+ +  Y      E+A+ + + M    ++ D+VT+  L+ G  +  KY E     ++M+ 
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 426

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             +      YS+++  YSK G   EA  IF + K AG + DV+ Y++++ A   +     
Sbjct: 427 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 486

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
           A  L  EM   GI P+ +  ++++ AF +          V  DL ++KE
Sbjct: 487 ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVF--VLMDLMREKE 533



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 193/424 (45%), Gaps = 72/424 (16%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V +++ L+++YGRS    +A  VF  M++   KPN+VTYNA+IDA G  G      VEIF
Sbjct: 258 VVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF-LAEAVEIF 316

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
             M ++G++P+ ++  +LLA CSR         + +    RGI+ +   YN+ + +    
Sbjct: 317 RQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINA 376

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
           A+++ A  +   M  K +  + VT++ +I G  +  +  +A++   EM+ L I L +  Y
Sbjct: 377 AELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVY 436

Query: 408 NTVLSIYAKLGRFEEALLV--------------------------------CK---EMES 432
           ++VL  Y+K G+  EA  +                                C+   EME+
Sbjct: 437 SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 496

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK---------------ADC-------- 469
           +GI  D++  +AL+  + K G+   V  + + M+               + C        
Sbjct: 497 NGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKR 556

Query: 470 -------VSPNLLTYST-----LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
                  + P L + S      ++ ++ K G  +  M++F +   +G+  ++  Y+ L++
Sbjct: 557 AIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLE 616

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            L   G     + +L+ M+  GI+P+   Y  II    RSA  E     + + LG+ +E 
Sbjct: 617 HLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIEFE-PLIRQKLGEMREE 675

Query: 578 ANLD 581
             ++
Sbjct: 676 CKIN 679



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/389 (19%), Positives = 155/389 (39%), Gaps = 69/389 (17%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +++  GR  +   AK +F     E     V  ++ALI AYG +G+  EA+ +F  M++
Sbjct: 262 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321

Query: 257 YNLKPNLVTYNAVIDACGKG----------------------------------GVDFKH 282
             +KPN+V+   ++ AC +                                     + + 
Sbjct: 322 DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEK 381

Query: 283 VVEIFDDMLRNGVQPDRITF-----------------------------------NSLLA 307
            + ++  M +  V+ D +TF                                   +S+L 
Sbjct: 382 AIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLC 441

Query: 308 VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
             S+ G    A ++FN+M   G + D+  Y ++L A     +   A E+  EM A  I P
Sbjct: 442 AYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP 501

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           + +  S ++  + K G+  +   +   M+   I      +  + S    L  ++ A+ + 
Sbjct: 502 DSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLI 561

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           + M+           N +L  +GK GK + + ++F ++ A  V  NL TY+ L++     
Sbjct: 562 QMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAV 621

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALI 516
           G +++ +++      AG++    +Y  +I
Sbjct: 622 GNWRKYIEVLEWMSGAGIQPSNQMYRDII 650


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 269/583 (46%), Gaps = 52/583 (8%)

Query: 168 NRGEWSKAIQCFAFAVKREER--KNDQGKLA------SAMISILGRLGKVDLAKNIFETA 219
           NR     A    A AV R  R  +   GK+       + +I    R G++DL        
Sbjct: 59  NRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNV 118

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
           + +G+      F+ L+          +A+  V   M      P++ +YN ++    KG  
Sbjct: 119 VKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLL----KGLC 174

Query: 279 DFKHVVEIFD------DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           D     E  +      D    G  PD +++N++L    + G  + A + ++EM+ RGI  
Sbjct: 175 DENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILP 234

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D+ TY++++ A+CK   MD A E++  M    + P+ +TY++++ GY  +G+  +A+   
Sbjct: 235 DVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 294

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            +M+  G+  + V+Y+++++   K GR  EA  +   M   G+  D  TY  LL GY  +
Sbjct: 295 KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATK 354

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G   E+  + + M  + + P+   ++ LI  Y+K     +AM +F + +Q GL  +VV Y
Sbjct: 355 GALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCY 414

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG 572
             +ID LCK+G V+ A+   ++M  EG+ PN++ Y S+I          CT D  ++   
Sbjct: 415 GTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL-------CTCDKWDK--- 464

Query: 573 KQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
              E   L+ +         + G   N I   F  ++     +G+        ++    +
Sbjct: 465 --AEELILEML---------DRGICLNTIF--FNSIIDSHCKEGR--------VIESEKL 503

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-R 690
           F  M ++ +KP+++T++ +++ C      ++A+ LL  +     +   V +G L+ GY R
Sbjct: 504 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 563

Query: 691 DNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
            +    AL+LF E+     S     YN +   L+H  +   A+
Sbjct: 564 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 141/529 (26%), Positives = 246/529 (46%), Gaps = 38/529 (7%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSM---KRYNLKPNLVTYNAVIDACGKGGVDFKHVV 284
           V++++ L+         QEA+ + + M   +     P++V+YN V++   K G D     
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG-DSDKAY 221

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
             + +ML  G+ PD +T++S++A   +    + A  + N MV  G+  D  TYN++L   
Sbjct: 222 STYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 281

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C   Q   A   + +M +  + PNVVTYS++++   K GR  +A  +F  M   G+  D 
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +Y T+L  YA  G   E   +   M  +GI+ D   +N L+  Y KQ K D+   +F +
Sbjct: 342 ATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M+   ++PN++ Y T+IDV  K G   +AM  F +    GL  ++++Y++LI  LC    
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVERDLGKQKE----S 577
            + A  L+ EM   GI  N + +NSIID+    GR   +E   D + R +G + +    +
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR-IGVKPDIITYN 520

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKV--------FGQLVAEKAGQGKKENRCRQEILCI 629
             +D  C     D  EA +    ++ V        +G L+       + ++         
Sbjct: 521 TLIDGCCLAGKMD--EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDA-------- 570

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV----YGVA-HG 684
           L +F++M    + PN++T++ IL           A  L   +     Q+    Y +  HG
Sbjct: 571 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHG 630

Query: 685 LLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           L    ++N+  +AL +F  + L D    +  +N +   L   G+   A+
Sbjct: 631 LC---KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 676



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 181/342 (52%), Gaps = 3/342 (0%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD 279
           ++G    V  +S+L++   ++G   EA  +F+SM +  L+P++ TY  ++     KG + 
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALV 358

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
             H   + D M+RNG+QPD   FN L+   ++    + A  +F++M   G++ ++  Y T
Sbjct: 359 EMHA--LLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++D +CK   +D A     +M  + ++PN++ Y+++I G     + D A  +  EM   G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I L+ + +N+++  + K GR  E+  +   M   G++ D +TYN L+ G    GK DE  
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++   M +  V P+++TY TLI+ Y +     +A+ +F+E   +G+  +++ Y+ ++  L
Sbjct: 537 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
                  +A  L   +TK G +  + TYN I+    ++  T+
Sbjct: 597 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTD 638



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 172/358 (48%), Gaps = 36/358 (10%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD-----FKH 282
           + F+ LI AY +     +A+ VF+ M+++ L PN+V Y  VID  C  G VD     F+ 
Sbjct: 377 HVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436

Query: 283 VV----------------------------EIFDDMLRNGVQPDRITFNSLL-AVCSRGG 313
           ++                            E+  +ML  G+  + I FNS++ + C  G 
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           + E+ + LF+ MV  G+  DI TYNTL+D  C   +MD A +++A M +  + P++VTY 
Sbjct: 497 VIESEK-LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYG 555

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+I+GY +  R+DDAL +F EM   G+  + ++YN +L       R   A  +   +  S
Sbjct: 556 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS 615

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G + +  TYN +L G  K    DE  RMF+ +    +     T++ +I    K G   EA
Sbjct: 616 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA 675

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             +F      GL  DV  YS + + L + G +E    L   M + G   +    NSI+
Sbjct: 676 KDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIV 733



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 176/357 (49%), Gaps = 7/357 (1%)

Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
             F+  R+   N        +I +L + G VD A   FE  ++EG    +  +++LI   
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRNGV 295
                  +A  +   M    +  N + +N++ID+  K G     V+E   +FD M+R GV
Sbjct: 457 CTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG----RVIESEKLFDLMVRIGV 512

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +PD IT+N+L+  C   G  + A  L   MV  G+  DI TY TL++  C+ ++MD A  
Sbjct: 513 KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 572

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           +  EM +  +SPN++TY+ ++ G     R   A  ++  +   G  L+  +YN +L    
Sbjct: 573 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC 632

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K    +EAL + + +  + ++ +  T+N ++G   K G+ DE + +F    A+ + P++ 
Sbjct: 633 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVR 692

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           TYS + +   + G  +E   +F   ++ G  AD  + ++++  L + G +  A + L
Sbjct: 693 TYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYL 749


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 189/358 (52%), Gaps = 5/358 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+ L ++G+   A  +      +     V  +S +I    +     +A  +++ M    
Sbjct: 164 LINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKR 223

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
           + P +VT++++I   C  G   FK    +F++M+   + PD  TFN L+ A+C  G + E
Sbjct: 224 IPPTVVTFSSLIYGFCIVG--KFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKE 281

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           A +N+   M+  G++  + TYNTL+D  C   ++  A  +++ +    ++PN  +Y+ MI
Sbjct: 282 A-KNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMI 340

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G+ K   +D+AL +F EM   GI   +V+YN+++    K GR   A  +  EM ++ I 
Sbjct: 341 NGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIP 400

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTYN+L+  + K    D+   + +++K   + PN+ TY+ LID   KGG  K A  +
Sbjct: 401 ADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDV 460

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           F++    G   +   Y+ +I+ LCK GL + A  LL +M   GI P+ VTY +II A 
Sbjct: 461 FQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQAL 518



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 225/494 (45%), Gaps = 36/494 (7%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDF 280
           ++G    ++  S LI+ Y   G    A SVF  + +  L             C  G V+ 
Sbjct: 95  SKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGL-------------CLNGKVN- 140

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
              +   D +L  G   + +T+  L+    + G   AA  +  ++  + ++ ++  Y+T+
Sbjct: 141 -EALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTI 199

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +D +CK   +  A+ + +EM  K I P VVT+S++I G+   G+  DA  +F+EM    I
Sbjct: 200 IDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNI 259

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY---GKQGKYDE 457
             D  ++N ++    K G+ +EA  V   M   G+    VTYN L+ GY    + GK   
Sbjct: 260 NPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKH 319

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
           V  +  +M+   V+PN  +Y+ +I+ + K  +  EA+ +F E    G+    V Y++LID
Sbjct: 320 VLSIISRMR---VAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLID 376

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            LCK G +  A  L+DEM    I  ++VTYNS+ID F ++   +  +  V+    K KE 
Sbjct: 377 GLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVK----KIKEH 432

Query: 578 ANLDAMCSQD--DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF-- 633
                MC+ +     + + G+  N    VF  L+ +               LC  G+F  
Sbjct: 433 GIQPNMCTYNILIDGLCKGGQLKNA-QDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDE 491

Query: 634 -----QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA-HGLLM 687
                 KM    I P+ VT+  I+ A    +  E A  LL E+ +    VY       L+
Sbjct: 492 AEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTLV 551

Query: 688 GYRDNIWVQALSLF 701
           G   N+ +  +SL 
Sbjct: 552 GRTLNLGMNLISLL 565



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 5/197 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  L + G++  A  + +   N      +  +++LI  + ++ +  +AI++   +K 
Sbjct: 372 NSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKE 431

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           + ++PN+ TYN +ID   KGG   K+  ++F D+L  G   +  T+N ++    + GL++
Sbjct: 432 HGIQPNMCTYNILIDGLCKGG-QLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFD 490

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L ++M   GI  D  TY T++ A+    + + A +++ EM  K     VV Y+  I
Sbjct: 491 EAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIK----GVVVYAFEI 546

Query: 377 DGYAKAGRLDDALNMFS 393
                   L+  +N+ S
Sbjct: 547 RRTLVGRTLNLGMNLIS 563


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 183/339 (53%), Gaps = 5/339 (1%)

Query: 223 GYGN--TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD 279
           GYG   T  +   L++ + + G  +EA+     +      P+ VT+N++++  C  G V+
Sbjct: 221 GYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVN 280

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
               ++I D M+  G  PD  T+NSL++   + G +E A  +  +M+ R    +  TYNT
Sbjct: 281 --DALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNT 338

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+ A+CK  +++ A ++   + +K + P+V T++T+I G   +   D A+ MF EMK  G
Sbjct: 339 LISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG 398

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
              D  +Y+ ++       R +EAL++ KEMESSG  ++AV YN L+ G  K  + ++  
Sbjct: 399 CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAE 458

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +F+QM+   VS + +TY+TLID   K    +EA Q+  +    GLK D   Y++L+   
Sbjct: 459 EIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYF 518

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           C+ G +E A  ++  M   G  P++ TY ++I    R+ 
Sbjct: 519 CRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAG 557



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 182/356 (51%), Gaps = 2/356 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V+ A         EG+      F++L++ + R G   +A+ + + M      P++ TY
Sbjct: 242 GRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTY 301

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N++I    K G +F+  +EI   M+     P+ +T+N+L++   +    EAA +L   +V
Sbjct: 302 NSLISGMCKLG-EFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILV 360

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +G+  D+ T+NTL+  +C     D+A E+  EM  K   P+  TYS +ID      RL 
Sbjct: 361 SKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLK 420

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +AL +  EM+  G   + V YNT++    K  R E+A  +  +ME  G+ + +VTYN L+
Sbjct: 421 EALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLI 480

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G  K  + +E  ++ +QM  + + P+  TY++L+  + + G  ++A  I +     G +
Sbjct: 481 DGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCE 540

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-FGRSATTE 561
            D+  Y  LI  LC+ G V+ A  LL  +  +GI      YN +I A F R  T E
Sbjct: 541 PDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKE 596



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 193/382 (50%), Gaps = 3/382 (0%)

Query: 169 RGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTV 228
            G   +A++ F   V  E    DQ    S +++   R+G V+ A +I +  + +G+   V
Sbjct: 241 EGRVEEALR-FVLEVSEEGFSPDQVTFNS-LVNGFCRIGNVNDALDIVDFMIEKGFDPDV 298

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y +++LIS   + G  ++AI +   M      PN VTYN +I A  K   + +   ++  
Sbjct: 299 YTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKEN-EIEAATDLAR 357

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            ++  G+ PD  TFN+L+         + A  +F EM ++G   D FTY+ L+D++C   
Sbjct: 358 ILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYER 417

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++  A  ++ EM +   + N V Y+T+IDG  K+ R++DA  +F +M+ LG+    V+YN
Sbjct: 418 RLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYN 477

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T++    K  R EEA  +  +M   G++ D  TYN+LL  + + G  ++   + + M ++
Sbjct: 478 TLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASN 537

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
              P++ TY TLI    + G    A ++ R  +  G+      Y+ +I AL      +  
Sbjct: 538 GCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEG 597

Query: 529 VSLLDEMTKEGIRPNVVTYNSI 550
           + L  EM ++   P+ +T+  +
Sbjct: 598 MRLFREMMEKSDPPDALTHKIV 619



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 196/400 (49%), Gaps = 49/400 (12%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K+ L + +    +NEG    V  F+ LI A  ++   + AI +   M  + LKP+ +T+ 
Sbjct: 138 KLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFT 197

Query: 268 AVIDA------------------------------------CGKGGVD--FKHVVEIFDD 289
            ++                                      C +G V+   + V+E+ ++
Sbjct: 198 TLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEE 257

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
               G  PD++TFNSL+    R G    A ++ + M+ +G D D++TYN+L+  +CK  +
Sbjct: 258 ----GFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGE 313

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            + A EI+ +M  +  SPN VTY+T+I    K   ++ A ++   +   G+  D  ++NT
Sbjct: 314 FEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNT 373

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++         + A+ + +EM++ G + D  TY+ L+     + +  E   + ++M++  
Sbjct: 374 LIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSG 433

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            + N + Y+TLID   K    ++A +IF + +  G+    V Y+ LID LCKN  VE A 
Sbjct: 434 CARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEAS 493

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
            L+D+M  EG++P+  TYNS++  F       C V D+E+
Sbjct: 494 QLMDQMIMEGLKPDKFTYNSLLTYF-------CRVGDIEK 526



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 211/427 (49%), Gaps = 31/427 (7%)

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN--GVQPDRITFNSLLAVCSRGGLWEAA 318
           PN  T+  +I    +   +F H +E    +L N  G +PD   +N  L         +  
Sbjct: 88  PNATTFATLI----QSFTNF-HEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLV 142

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L ++MV+ GI  D+ T+N L+ A+CK  Q+  A  ++ EM    + P+ +T++T++ G
Sbjct: 143 EMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQG 202

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           + + G L+ AL M  +M   G  L  VS   +++ + K GR EEAL    E+   G   D
Sbjct: 203 FIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPD 262

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VT+N+L+ G+ + G  ++   + + M      P++ TY++LI    K G +++A++I +
Sbjct: 263 QVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQ 322

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +        + V Y+ LI ALCK   +E+A  L   +  +G+ P+V T+N++I     S 
Sbjct: 323 QMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSK 382

Query: 559 TTECTVDDVE--RDLGKQKE----SANLDAMCSQDD--------KDVQEAGRTDNQIIKV 604
             +  ++  E  ++ G + +    S  +D++C +          K+++ +G   N +  V
Sbjct: 383 NQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAV--V 440

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           +  L+       + E+   +EI      F +M  L +  + VT++ +++   +    E+A
Sbjct: 441 YNTLIDGLCKSRRIED--AEEI------FDQMELLGVSRSSVTYNTLIDGLCKNKRVEEA 492

Query: 665 SMLLEEL 671
           S L++++
Sbjct: 493 SQLMDQM 499



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 106/449 (23%), Positives = 203/449 (45%), Gaps = 41/449 (9%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR-GIDQDIFTYN 338
           F  +  +   +  +G  P+  TF +L+   +    +    NL   + +  G   D   YN
Sbjct: 71  FDSITTLLKQLKSSGSIPNATTFATLIQSFTN---FHEIENLLKILENELGFKPDTNFYN 127

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
             L+A+ +  ++ L   + ++M  + I  +V T++ +I    KA +L  A+ M  EM   
Sbjct: 128 IALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANH 187

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D +++ T++  + + G    AL + K+M   G     V+   L+ G+ K+G+ +E 
Sbjct: 188 GLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEA 247

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            R   ++  +  SP+ +T+++L++ + + G   +A+ I     + G   DV  Y++LI  
Sbjct: 248 LRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISG 307

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKE 576
           +CK G  E A+ +L +M      PN VTYN++I A        C  +++E   DL +   
Sbjct: 308 MCKLGEFEKAIEILQQMILRECSPNTVTYNTLISAL-------CKENEIEAATDLARILV 360

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
           S  L       +  +Q    + NQ I                           + +F++M
Sbjct: 361 SKGLLPDVCTFNTLIQGLCLSKNQDIA--------------------------MEMFEEM 394

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GYRDNIWV 695
                KP+  T+S ++++       ++A MLL+E+         V +  L+ G   +  +
Sbjct: 395 KNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRI 454

Query: 696 Q-ALSLFDEVKLMDSSTASAFYNALTDML 723
           + A  +FD+++L+  S +S  YN L D L
Sbjct: 455 EDAEEIFDQMELLGVSRSSVTYNTLIDGL 483


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 228/484 (47%), Gaps = 22/484 (4%)

Query: 202 ILGRLGKVD---LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ILG L K     +  ++F+     G  +     + LI++Y        A SVF  + +  
Sbjct: 55  ILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLG 114

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            +P+++TY  +I   C  G V  K  +   D ++  G++ D +++ +L+    + G    
Sbjct: 115 YQPDIITYTTLIRGLCLNGQV--KESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGP 172

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  L  ++       D+  YNT++D +CK   +  AF++  EM  K + PNVVTY+++I 
Sbjct: 173 ALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIY 232

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+   G+LD A  + +EM    +  +  ++NT++    K G+  EA  +   M   G+  
Sbjct: 233 GFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGP 292

Query: 438 DAVTYNALLGGY---GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           D  TYNAL+ GY    + GK   V  +  QM   C   ++ +YS +I   SK  +  EAM
Sbjct: 293 DVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTC---DVHSYSVMISGLSKMKMLDEAM 349

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +F   +   +  DVV YS+LID LCK+G + SA+  +DEM   G  PNV+TY S+IDA 
Sbjct: 350 DLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDAL 409

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            +S   +  +  +++ +  Q   AN+       D   ++   TD Q  KVF  L+ +   
Sbjct: 410 CKSHQVDKAIALLKK-IKDQGIQANMYTYNILVDGLCKDGRLTDAQ--KVFQDLLMKGHN 466

Query: 615 QGKKENRCRQEILC-------ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
                       LC        L +  KM      P+ + +  I+NA    +  + A  L
Sbjct: 467 VDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKL 526

Query: 668 LEEL 671
           L E+
Sbjct: 527 LREM 530



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 205/401 (51%), Gaps = 13/401 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+R L   G+  +++  F   +  +  K D     + +I+ L ++G+   A  +   
Sbjct: 122 YTTLIRGLCLNGQVKESLN-FHDRLVSQGIKLDHVSYGT-LINGLCKIGQTGPALRLLRK 179

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
              E     V  ++ +I    +    ++A  ++  M    + PN+VTY ++I   C  G 
Sbjct: 180 IEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQ 239

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           +D      + ++M+   V P+  TFN+L+  +C  G + E A++L   M+  G+  D+FT
Sbjct: 240 LD--KAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMRE-AKSLVAVMMKEGVGPDVFT 296

Query: 337 YNTLLDA---ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           YN L+D    + +  +    F IMA+M    ++ +V +YS MI G +K   LD+A+++F 
Sbjct: 297 YNALMDGYFLVKEAGKAKNVFNIMAQM---GVTCDVHSYSVMISGLSKMKMLDEAMDLFE 353

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M+   +  D V+Y++++    K GR   AL    EM   G   + +TY +L+    K  
Sbjct: 354 GMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSH 413

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           + D+   + +++K   +  N+ TY+ L+D   K G   +A ++F++    G   DVV YS
Sbjct: 414 QVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYS 473

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +I+ LCK  L + A++LL +M  +G  P+ + Y +II+AF
Sbjct: 474 IMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAF 514



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 194/401 (48%), Gaps = 20/401 (4%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           ++ F+ MLR    P  I F  +L    +   +    +LF  M   GI  +  T N L+++
Sbjct: 34  IDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINS 93

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C   Q++ AF + A++      P+++TY+T+I G    G++ ++LN    +   GI LD
Sbjct: 94  YCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLD 153

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            VSY T+++   K+G+   AL + +++E    R D V YN ++ G  K     +   ++ 
Sbjct: 154 HVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYC 213

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M    V PN++TY++LI  +   G   +A  +  E     +  +V  ++ L+D LCK G
Sbjct: 214 EMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEG 273

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG--RSATTECTVDDVERDLGKQKESANLD 581
            +  A SL+  M KEG+ P+V TYN+++D +   + A     V ++   +G   +  +  
Sbjct: 274 KMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYS 333

Query: 582 AMCSQDDK--------DVQEAGRTDNQIIKV--FGQLVAEKAGQGKKENRCRQEILCILG 631
            M S   K        D+ E  R +N I  V  +  L+      G+  +         L 
Sbjct: 334 VMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSA--------LK 385

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              +MH     PNV+T++++++A  + +  + A  LL++++
Sbjct: 386 YVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIK 426



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 146/274 (53%), Gaps = 2/274 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++  L + GK+  AK++    + EG G  V+ ++AL+  Y       +A +VFN M +
Sbjct: 263 NTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQ 322

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +  ++ +Y+ +I    K  +     +++F+ M    V PD + ++SL+    + G   
Sbjct: 323 MGVTCDVHSYSVMISGLSKMKM-LDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRIN 381

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +A    +EM  RG   ++ TY +L+DA+CK  Q+D A  ++ ++  + I  N+ TY+ ++
Sbjct: 382 SALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILV 441

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  K GRL DA  +F ++   G  +D V+Y+ +++   K   F+EAL +  +ME  G  
Sbjct: 442 DGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCV 501

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
            DA+ Y  ++  + ++   D+  ++  +M  DCV
Sbjct: 502 PDAIAYETIINAFFEKDMNDKAEKLLREM-IDCV 534



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 115/289 (39%), Gaps = 66/289 (22%)

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           L+DA++ F+ M  +      + +  +L    K   +   + + + ME  GI+ + +T N 
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+  Y    + +    +F ++      P+++TY+TLI      G  KE++         G
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           +K D V Y  LI+ LCK G    A+ LL ++  E  RP+VV YN+II             
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTII------------- 196

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                           D +C   DK V++A                              
Sbjct: 197 ----------------DGLCK--DKLVRDA------------------------------ 208

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
                  ++ +M + ++ PNVVT+++++         + A  LL E+ L
Sbjct: 209 -----FDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVL 252


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 197/382 (51%), Gaps = 3/382 (0%)

Query: 173 SKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFS 232
           + A   F    K+  R+N+     + +I  L  +G+VD   NIF+    +    TV  ++
Sbjct: 21  NSAFSVFNMMPKKGCRRNEVS--YTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYT 78

Query: 233 ALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLR 292
            ++ A   SG   EAI++F+ M+    +PN+ TY  +I+A  K     +    I D+M+ 
Sbjct: 79  VIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKE-TKLEEGRRILDEMVE 137

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
            G+ P   T+N+L+    + G+ EAA+ + + M     + +  TYN L+   C+   +  
Sbjct: 138 KGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHR 197

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A  ++++M    ++P+VVTY+++I G  K G LD A  + + M   G+  D+ +Y+  + 
Sbjct: 198 AMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFID 257

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              K GR EEA ++   ++  GI+ + V Y AL+ GY K GK D+   + ++M  +   P
Sbjct: 258 TLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLP 317

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           N  TY+ LID   K    +EA+ +     Q GLK  V  Y+ LI A+ K G  + A  +L
Sbjct: 318 NSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRIL 377

Query: 533 DEMTKEGIRPNVVTYNSIIDAF 554
           D+M   G +P+V  Y + I AF
Sbjct: 378 DQMVSSGYQPDVYIYTAFIHAF 399



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 123/499 (24%), Positives = 204/499 (40%), Gaps = 72/499 (14%)

Query: 120 RHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLC--GADDYTFLLRELGNRGEWSKAIQ 177
           R+ V     +H +    R D  + +I KK     C      YT ++  L   G   +AI 
Sbjct: 37  RNEVSYTNLIHGLCEVGRVDEGI-NIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAIN 95

Query: 178 CFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISA 237
              F+  RE          + MI+ + +  K++  + I +  + +G   +V  ++ALI  
Sbjct: 96  --LFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDG 153

Query: 238 YGR------------------------------SGYCQE-----AISVFNSMKRYNLKPN 262
           Y +                               G+C++     A+++ + M    L P+
Sbjct: 154 YCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPS 213

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +VTYN++I   C  G +D  +   + + M  NGV PD+ T++  +    + G  E A  L
Sbjct: 214 VVTYNSLIHGQCKIGYLDSAY--RLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVL 271

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           FN +  +GI  +   Y  L+D  CK  +MD A  ++  M  ++  PN  TY+ +IDG  K
Sbjct: 272 FNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCK 331

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
             ++ +AL +   M   G+     +Y  ++    K G F+ A  +  +M SSG + D   
Sbjct: 332 ERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYI 391

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y A +  +  +G   E   M   M    V P+ LTY+ +ID Y   GL   A  + +   
Sbjct: 392 YTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMF 451

Query: 502 QAGLKADVVLYSALIDALCKNGLV-----------------------------ESAVSLL 532
             G       YS LI  L K  L                              E+A+ L 
Sbjct: 452 DTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELF 511

Query: 533 DEMTKEGIRPNVVTYNSII 551
           ++M + G  PN+ TY  +I
Sbjct: 512 EKMLEHGCSPNINTYAKLI 530



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 8/261 (3%)

Query: 309 CSRGGLWEAARN--------LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           C  G L EA  N        +FN M  +G  ++  +Y  L+  +C+  ++D    I  +M
Sbjct: 6   CKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKM 65

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
              +  P V TY+ ++    ++GR  +A+N+FSEM+  G   +  +Y  +++   K  + 
Sbjct: 66  REDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKL 125

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           EE   +  EM   G+     TYNAL+ GY K+G  +  + + + M ++  +PN  TY+ L
Sbjct: 126 EEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNEL 185

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I  + +      AM +  +  ++ L   VV Y++LI   CK G ++SA  LL+ M + G+
Sbjct: 186 ICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGV 245

Query: 541 RPNVVTYNSIIDAFGRSATTE 561
            P+  TY+  ID   +    E
Sbjct: 246 VPDQWTYSVFIDTLCKKGRIE 266



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/423 (22%), Positives = 180/423 (42%), Gaps = 67/423 (15%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S  I  L + G+++ A  +F +   +G       ++ALI  Y ++G   +A S+ + M  
Sbjct: 253 SVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLT 312

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            +  PN  TYNA+ID  C +  V  +  + + + M++ G++    T+  L+    + G +
Sbjct: 313 EDCLPNSSTYNALIDGLCKERKV--QEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDF 370

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  + ++MV  G   D++ Y   + A C    +  A ++M+ M  + + P+ +TY+ +
Sbjct: 371 DYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLV 430

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS----------------------- 412
           ID Y   G L+ A ++   M   G      +Y+ ++                        
Sbjct: 431 IDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNV 490

Query: 413 IYA------KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
            +A      K+ +FE AL + ++M   G   +  TY  L+ G  K G+    +++F+ M 
Sbjct: 491 FFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMN 550

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQ------------------------------- 495
              VSP+   Y++L++   + G+Y +A++                               
Sbjct: 551 ERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKE 610

Query: 496 ----IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
               +F    Q G   D V +  LID L KNGL +    LL  M   G + +  TY  +I
Sbjct: 611 KAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLI 670

Query: 552 DAF 554
           +  
Sbjct: 671 EGL 673


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 200/406 (49%), Gaps = 7/406 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL  L     W +A +     + R  R        S ++S   + GKV+ ++ + + 
Sbjct: 48  YNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKE 107

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            ++ G       ++ ++++  +S    EA+ +   M R    P L+T+N +I  C +   
Sbjct: 108 VISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREK- 166

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           + +    +   M  +GV+ D +T+N+L+    + G  + A  L   M   G   D+  Y+
Sbjct: 167 NLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYS 226

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           + +  +CK  ++  A +++ +M   +  PNVVTY+T++DG  K+G++D AL M  +M   
Sbjct: 227 SFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS 286

Query: 399 -GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G GL+ V Y+TV+    KLGR +EA  V + M  +G R D VTY++L+ G  K GK +E
Sbjct: 287 DGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEE 346

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD-----VVLY 512
                 +M  +   PN +TY +L+      G   EA ++  E    G   D     V  Y
Sbjct: 347 AVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTY 406

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +ALI  LCK G ++ A+     M  +G  P+ V+Y++I++   RS 
Sbjct: 407 NALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 191/379 (50%), Gaps = 44/379 (11%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE-IFDD 289
           F+AL++ + + G   +   +  +M    ++PN+V+YN +++   K  ++  H  E +  D
Sbjct: 13  FNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCK--LERWHEAEELVRD 70

Query: 290 MLRNGVQ--PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD-------------- 333
           M+  G +  PD +T+++LL+   + G  E +R L  E++ RG+  D              
Sbjct: 71  MISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKS 130

Query: 334 ---------------------IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
                                + T+NTL+   C+   +++A  ++  M A  +  +VVTY
Sbjct: 131 ARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTY 190

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T++DG  KAGRL +A  +   MK  G   D V+Y++ +    K G+   A  V ++M  
Sbjct: 191 NTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRD 250

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYK 491
           S    + VTYN +L G  K GK D    M EQM  +D    N++ YST++D   K G  +
Sbjct: 251 SDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQ 310

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA  +     +AG + DVV YS+L++ LCK G +E AV  + EM  EG +PN VTY S++
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLV 370

Query: 552 DAF---GRSATTECTVDDV 567
                 GR A  E  V+++
Sbjct: 371 HGLCSCGRLAEAERMVEEM 389



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 201/400 (50%), Gaps = 29/400 (7%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M R G  P+ +TFN+L+   S+ G       L   M  RGI  ++ +YN LL+ +CK  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 350 MDLAFEIMAEMPAKN--ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
              A E++ +M ++    +P++VTYST++ GY KAG+++++  +  E+   G+  D + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
             V++   K  R  EAL + +EM  +G     +T+N L+ G  ++   +    + + M A
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             V  +++TY+TL+D   K G  +EA Q+    K +G   DVV YS+ +  LCK+G V +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER-------DLGKQKESANL 580
           A  +L++M      PNVVTYN+I+D   +S   +  ++ +E+        L     S  +
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 581 DAMC----SQDDKDVQEA-----GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
           D +C    +Q+ + V EA      R D   +  +  LV      GK E          + 
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPD---VVTYSSLVNGLCKAGKIEE--------AVE 349

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             ++M     KPN VT+ ++++    C    +A  ++EE+
Sbjct: 350 AVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 129/259 (49%), Gaps = 9/259 (3%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G++  A+ + E     G    V A+S+ +    +SG    A  V   M+  +  PN
Sbjct: 197 LCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPN 256

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLR-NGVQPDRITFNSLLAVCSRGGLWEAARN 320
           +VTYN ++D  C  G +D    +E+ + M   +G   + + +++++    + G  + AR+
Sbjct: 257 VVTYNTILDGLCKSGKID--TALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARS 314

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           +   M   G   D+ TY++L++ +CK  +++ A E + EM  +   PN VTY +++ G  
Sbjct: 315 VMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLC 374

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRV-----SYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
             GRL +A  M  EM   G G D       +YN ++    K GR ++AL   + M S G 
Sbjct: 375 SCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGC 434

Query: 436 RKDAVTYNALLGGYGKQGK 454
             D V+Y+ ++ G  + G+
Sbjct: 435 DPDGVSYSTIVEGLARSGR 453



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 150/318 (47%), Gaps = 33/318 (10%)

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M      PN VT++ +++G++K GR  D   +   M   GI  + VSYN +L    KL R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 420 FEEALLVCKEMESSGIRK--DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           + EA  + ++M S G R   D VTY+ LL GY K GK +E R + +++ +  + P+ L Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           + ++    K     EA+++  E  +AG    ++ ++ LI   C+   +E A SLL  M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
            G++ +VVTYN+++D   ++      + + E+ L + K S      C+ D          
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGR----LQEAEQLLERMKASG-----CAPD---------- 221

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
               +  +   V      GK        +L    V ++M      PNVVT++ IL+   +
Sbjct: 222 ----VVAYSSFVYGLCKSGK--------VLNAHQVLEQMRDSDHDPNVVTYNTILDGLCK 269

Query: 658 CNSFEDASMLLEELRLFD 675
               + A  ++E++   D
Sbjct: 270 SGKIDTALEMMEQMASSD 287


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 192/391 (49%), Gaps = 40/391 (10%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +D A   +   L+ G    V  ++++I+A  ++    +A+ V  SM +  + PN  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N+++   C  G    K  +     M  +GV+PD +T+NSL+    + G    AR +F+ M
Sbjct: 273 NSIVHGYCSSG--QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 326 VHRGIDQDIFTYNTLLDAIC-KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
             RG+  +I TY TLL     KGA +++   ++  M    I PN   +S +I  YAK G+
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL------------------- 425
           +D A+ +FS+M+  G+  D V+Y TV+ I  K GR E+A+                    
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 426 ----------------VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
                           +  EM   GI  D + +N+++  + K+G+  E  ++F+ M    
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           V PN++TYSTLID Y   G   EA ++       G+K D V Y+ LI+  CK   +E A+
Sbjct: 510 VKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            L  EM   G+ P+++TYN I+    ++  T
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRT 600



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 247/513 (48%), Gaps = 44/513 (8%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V +++ +I+ + + G   +A   ++ M    + PN+VTYN++I A C    +D    +E+
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMD--KAMEV 256

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
              M++NGV P+  T+NS++   CS G   EA      +M   G++ D+ TYN+L+D +C
Sbjct: 257 LTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAI-GFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  +   A ++   M  + + P + TY T++ GYA  G L +   +   M   GI  +  
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            ++ ++  YAK G+ ++A+LV  +M   G+  D VTY  ++G   K G+ ++  R FEQM
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             + +SP  + Y++LI        + +A ++  E    G+  D + ++++ID+ CK G V
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
             +  L D M + G++PN++TY+++ID +  +              GK  E+  L  + S
Sbjct: 496 IESEKLFDLMVRIGVKPNIITYSTLIDGYCLA--------------GKMDEATKL--LAS 539

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
                ++    T N +I  + ++              R E   +L  F++M    + P++
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKI-------------SRMEDALVL--FREMESSGVSPDI 584

Query: 646 VTFSAILNACSRCNSFEDASMLL----EELRLFDNQVYGVA-HGLLMGYRDNIWVQALSL 700
           +T++ IL    +      A  L     E     +   Y +  HGL    ++N+  +AL +
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC---KNNLTDEALRM 641

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           F  + L D    +  +N +   L   G+   A+
Sbjct: 642 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 176/320 (55%), Gaps = 1/320 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y FS LI AY + G   +A+ VF+ M++  L P+ VTY  VI    K G   +  +  F+
Sbjct: 375 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG-RVEDAMRYFE 433

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M+   + P  I +NSL+        W+ A+ L  EM+ RGI  D   +N+++D+ CK  
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++  + ++   M    + PN++TYST+IDGY  AG++D+A  + + M  +G+  D V+YN
Sbjct: 494 RVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+++ Y K+ R E+AL++ +EMESSG+  D +TYN +L G  +  +    + ++  +   
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
                L TY+ ++    K  L  EA+++F+      L+ +   ++ +I AL K G  + A
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 529 VSLLDEMTKEGIRPNVVTYN 548
             L   ++  G+ P+V TY+
Sbjct: 674 KDLFAALSANGLVPDVRTYS 693



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 233/485 (48%), Gaps = 34/485 (7%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKRYNLKPNLVT 265
           G++DL        + +G+     AF+ L+          +A+  V   M +    PN+ +
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 266 YNAVIDACGKGGVD---FKHVVEIFDDMLRNG--VQPDRITFNSLLAVCSRGGLWEAARN 320
           YN ++    KG  D    +  +E+   M  +G    PD +++ +++    + G  + A  
Sbjct: 165 YNILL----KGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
            ++EM+ RGI  ++ TYN+++ A+CK   MD A E++  M    + PN  TY++++ GY 
Sbjct: 221 TYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
            +G+  +A+    +M   G+  D V+YN+++    K GR  EA  +   M   G++ +  
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY  LL GY  +G   E+  + + M  + + PN   +S LI  Y+K G   +AM +F + 
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGR- 556
           +Q GL  D V Y  +I  LCK+G VE A+   ++M  E + P  + YNS+I +   F + 
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 557 SATTECTVDDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIKV--------FG 606
               E  ++ ++R +       N  +D+ C +    V E+ +  + ++++        + 
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEG--RVIESEKLFDLMVRIGVKPNIITYS 518

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            L+      GK +   +        +   M  + +KP+ VT++ ++N   + +  EDA +
Sbjct: 519 TLIDGYCLAGKMDEATK--------LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570

Query: 667 LLEEL 671
           L  E+
Sbjct: 571 LFREM 575



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 139/567 (24%), Positives = 257/567 (45%), Gaps = 61/567 (10%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY---NLKPNLVTYNA 268
           A+++F+  L  G G ++Y  +  ++   R      A+S +N M R     + PNL TY  
Sbjct: 38  ARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYGI 96

Query: 269 VIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           +I +C   G +D         ++++ G + D I F  LL  +C+     +A   +   M 
Sbjct: 97  LIGSCCCAGRLDLGFAA--LGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP--AKNISPNVVTYSTMIDGYAKAGR 384
             G   ++F+YN LL  +C   +   A E++  MP    +  P+VV+Y+T+I+G+ K G 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD A   + EM   GI  + V+YN++++   K    ++A+ V   M  +G+  +  TYN+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++ GY   G+  E     ++M +D V P+++TY++L+D   K G   EA ++F    + G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           LK ++  Y  L+      G +     LLD M + GI PN   ++ +I A+ +       V
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG----KV 390

Query: 565 DDVERDLGKQKESA-NLDAMCSQDDKDVQ-EAGRTDNQIIKVFGQLVAEKAGQGK----- 617
           D       K ++   N D +       +  ++GR ++  ++ F Q++ E+   G      
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA-MRYFEQMIDERLSPGNIVYNS 449

Query: 618 ---------KENRCRQEILCILG----------------------------VFQKMHKLK 640
                    K ++ ++ IL +L                             +F  M ++ 
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQAL 698
           +KPN++T+S +++        ++A+ LL  +     +   V +  L+ GY + +    AL
Sbjct: 510 VKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 699 SLFDEVKLMDSSTASAFYNALTDMLWH 725
            LF E++    S     YN +   L+ 
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQ 596



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 182/342 (53%), Gaps = 3/342 (0%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD 279
           ++G    V  +++L+    ++G C EA  +F+SM +  LKP + TY  ++     KG + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
             H   + D M+RNG+ P+   F+ L+   ++ G  + A  +F++M  +G++ D  TY T
Sbjct: 357 EMH--GLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++  +CK  +++ A     +M  + +SP  + Y+++I       + D A  +  EM   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I LD + +N+++  + K GR  E+  +   M   G++ + +TY+ L+ GY   GK DE  
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEAT 534

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++   M +  + P+ +TY+TLI+ Y K    ++A+ +FRE + +G+  D++ Y+ ++  L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +     +A  L   +T+ G +  + TYN I+    ++  T+
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 183/358 (51%), Gaps = 1/358 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++  L + G+   A+ +F++    G    +  +  L+  Y   G   E   + + M R
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN   ++ +I A  K G      + +F  M + G+ PD +T+ +++ +  + G  E
Sbjct: 368 NGIHPNHYVFSILICAYAKQG-KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A   F +M+   +      YN+L+ ++C   + D A E++ EM  + I  + + ++++I
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D + K GR+ ++  +F  M  +G+  + ++Y+T++  Y   G+ +EA  +   M S G++
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTYN L+ GY K  + ++   +F +M++  VSP+++TY+ ++    +      A ++
Sbjct: 547 PDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +    ++G + ++  Y+ ++  LCKN L + A+ +   +    ++    T+N +I A 
Sbjct: 607 YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 664



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 204/489 (41%), Gaps = 84/489 (17%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ---DIF 335
           D +HV   FD++LR G        N  LA  +R     AA + +N M   G D+   ++ 
Sbjct: 37  DARHV---FDELLRRGRGASIYGLNCALADVARHS-PAAAVSRYNRMARAGADEVTPNLC 92

Query: 336 TYNTLLDAICKGAQMDLAFE------------------------------------IMAE 359
           TY  L+ + C   ++DL F                                     ++  
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG--IGLDRVSYNTVLSIYAKL 417
           M      PNV +Y+ ++ G     R  +AL +   M   G     D VSY TV++ + K 
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G  ++A     EM   GI  + VTYN+++    K    D+   +   M  + V PN  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           ++++  Y   G  KEA+   ++    G++ DVV Y++L+D LCKNG    A  + D MTK
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
            G++P + TY +++  +   AT    V+              LD M           G  
Sbjct: 333 RGLKPEITTYGTLLQGY---ATKGALVE----------MHGLLDLMVRN--------GIH 371

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
            N    VF  L+   A QGK +    Q +L    VF KM +  + P+ VT+  ++    +
Sbjct: 372 PNHY--VFSILICAYAKQGKVD----QAML----VFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 658 CNSFEDASMLLEEL---RLF-DNQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTA 712
               EDA    E++   RL   N VY  + H L +  +   W +A  L  E+        
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK---WDKAKELILEMLDRGICLD 478

Query: 713 SAFYNALTD 721
           + F+N++ D
Sbjct: 479 TIFFNSIID 487



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 192/379 (50%), Gaps = 13/379 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           ++ L+     +G+  +A+    F+  R++  N        +I IL + G+V+ A   FE 
Sbjct: 377 FSILICAYAKQGKVDQAM--LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQ 434

Query: 219 ALNEGY--GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
            ++E    GN VY  ++LI +        +A  +   M    +  + + +N++ID+  K 
Sbjct: 435 MIDERLSPGNIVY--NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492

Query: 277 GVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G     V+E   +FD M+R GV+P+ IT+++L+      G  + A  L   MV  G+  D
Sbjct: 493 G----RVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             TYNTL++  CK ++M+ A  +  EM +  +SP+++TY+ ++ G  +  R   A  ++ 
Sbjct: 549 CVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            +   G  L+  +YN +L    K    +EAL + + +  + ++ +  T+N ++G   K G
Sbjct: 609 GITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVG 668

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           + DE + +F  + A+ + P++ TYS + +   + GL +E   +F   ++ G  A+  + +
Sbjct: 669 RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728

Query: 514 ALIDALCKNGLVESAVSLL 532
           +++  L + G +  A + L
Sbjct: 729 SIVRKLLQRGDITRAGTYL 747



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 145/346 (41%), Gaps = 77/346 (22%)

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA--FEIMAEMPAKNISPNVVTYS 373
           E AR++F+E++ RG    I+  N  L  + + +       +  MA   A  ++PN+ TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I     AGRLD           LG              +A LG       V K+    
Sbjct: 96  ILIGSCCCAGRLD-----------LG--------------FAALGN------VIKK---- 120

Query: 434 GIRKDAVTYNALLGGYGKQGK----YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           G R DA+ +  LL G     +     D V R   Q+   C+ PN+ +Y+ L+        
Sbjct: 121 GFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL--GCI-PNVFSYNILLKGLCDENR 177

Query: 490 YKEAMQIFREFKQAG--LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
            +EA+++ +     G     DVV Y+ +I+   K G ++ A     EM   GI PNVVTY
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237

Query: 548 NSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
           NSII A  ++                Q     ++ + S     V    RT N I+  +  
Sbjct: 238 NSIIAALCKA----------------QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
                +GQ K+           +G  +KMH   ++P+VVT++++++
Sbjct: 282 -----SGQPKEA----------IGFLKKMHSDGVEPDVVTYNSLMD 312


>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 805

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 147/571 (25%), Positives = 253/571 (44%), Gaps = 64/571 (11%)

Query: 153 LCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLA 212
           L  A D   LL+ L   G W  A+    +A  R E   D       ++  LGR G+ D  
Sbjct: 109 LLRAADLPSLLKALELSGHWEWALALLRWA--RAEGAADGPAPFEMVVRALGREGRHDAV 166

Query: 213 KNIF-ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
             +  E  L  G    V A++ ++ A  R G  + A+ +F+ ++R  + P  VTYN V+D
Sbjct: 167 CALLDEMPLPPGARLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLD 226

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
             G+ G  +  VV +  DM   GV+PD  T ++++A   R GL + A   F ++  RG  
Sbjct: 227 VYGRMGRSWPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHA 286

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMP------------------------------ 361
             + TYN LL    K      A  ++ EM                               
Sbjct: 287 PCVVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKC 346

Query: 362 -----AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
                 K + PN  TY+T++  Y  AG++D+AL +F  MK  G      +YN VL +  K
Sbjct: 347 IDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGK 406

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
             RF   L +  EM  SG   + VT+N LL   GK+G    V R+ E MK+  V     T
Sbjct: 407 KSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDT 466

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y+TLI  Y + G    A +++ E   AG    +  Y+AL++ L + G   +A S++ +M 
Sbjct: 467 YNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMK 526

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ---------KESANLDAMCSQD 587
            EG +PN ++Y+ ++    +       ++ +E+++ +          +     +  C + 
Sbjct: 527 SEGFKPNDMSYSLLLQCHAKGGNA-AGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRL 585

Query: 588 D------KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
           +      ++V+  G   + +I      +  K G   K           + +F+ + +L +
Sbjct: 586 EGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKA----------MEMFESIEQLGL 635

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            P+++T++++++  ++ N   +A  +L  LR
Sbjct: 636 SPDLITYNSLMDMYAKSNEPWEAEKILNRLR 666



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 212/484 (43%), Gaps = 47/484 (9%)

Query: 123 VVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFA 180
           VV   AL  V   A +      +L++ E   C  D  T+  L       G + +A +C  
Sbjct: 289 VVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCID 348

Query: 181 FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
             + +    N      + +++  G  GKVD A  +F+     G+      ++ ++   G+
Sbjct: 349 TMIGKGLLPNTFTY--NTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGK 406

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD--FKHVVE------------- 285
                  + +   M R    PN VT+N ++  CGK G++     V+E             
Sbjct: 407 KSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDT 466

Query: 286 -------------------IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
                              ++D+M   G  P   T+N+LL V SR G W AAR++ ++M 
Sbjct: 467 YNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMK 526

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G   +  +Y+ LL    KG        I  E+   NI P+ V   T++    K  RL+
Sbjct: 527 SEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLE 586

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
                F E+K  G   D V  N++LSIYAK G + +A+ + + +E  G+  D +TYN+L+
Sbjct: 587 GIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLM 646

Query: 447 GGYGKQGKYDEVRRMFEQMKADC---------VSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
             Y K  +  E  ++  ++++           + P++++Y+T+I+ + K GL KEA ++ 
Sbjct: 647 DMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVL 706

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E    G+   V+ Y  L+       +   A  ++  M +  ++P  +TY  ++D++ R+
Sbjct: 707 SEMIADGVAPCVITYHTLVGGYASREMFAEAREVVGYMIQRKLKPMELTYRRVVDSYCRA 766

Query: 558 ATTE 561
              E
Sbjct: 767 KRYE 770



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 149/326 (45%), Gaps = 10/326 (3%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I   GR G    A  +++     G+   +  ++AL++   R G    A S+ + MK   
Sbjct: 470 LICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEG 529

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            KPN ++Y+ ++    KGG +   +  I  ++ +  + P  +   +L+    +    E  
Sbjct: 530 FKPNDMSYSLLLQCHAKGG-NAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGI 588

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
              F E+  RG   D+   N++L    K      A E+   +    +SP+++TY++++D 
Sbjct: 589 ERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDM 648

Query: 379 YAKAGRLDDALNMFSEMKFLG---------IGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           YAK+    +A  + + ++            +  D VSYNTV++ + K G  +EA  V  E
Sbjct: 649 YAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVLSE 708

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M + G+    +TY+ L+GGY  +  + E R +   M    + P  LTY  ++D Y +   
Sbjct: 709 MIADGVAPCVITYHTLVGGYASREMFAEAREVVGYMIQRKLKPMELTYRRVVDSYCRAKR 768

Query: 490 YKEAMQIFREFKQAGLKADVVLYSAL 515
           Y++A        +A   +D  L  AL
Sbjct: 769 YEDARDFLAVVAEADTNSDEKLLGAL 794


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 250/489 (51%), Gaps = 23/489 (4%)

Query: 186 EERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           +E K+      S ++  L R  K++ A     T+  +  G +V +F++++S Y + G+  
Sbjct: 180 KEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVD 239

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
            A S F ++ +  L P++ ++N +I+  C  G +     +E+  DM ++GV+PD +T+N 
Sbjct: 240 MAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI--AEALELASDMNKHGVEPDSVTYNI 297

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L       G+   A  +  +M+ +G+  D+ TY  LL   C+   +D+   ++ +M ++ 
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357

Query: 365 ISPN-VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
              N ++  S M+ G  K GR+D+AL++F++MK  G+  D V+Y+ V+    KLG+F+ A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
           L +  EM    I  ++ T+ ALL G  ++G   E R + + + +   + +++ Y+ +ID 
Sbjct: 418 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 477

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y+K G  +EA+++F+   + G+   V  +++LI   CK   +  A  +LD +   G+ P+
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 537

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           VV+Y +++DA+     T+ ++D++ R++ K +     +   S   K +    + +N    
Sbjct: 538 VVSYTTLMDAYANCGNTK-SIDELRREM-KAEGIPPTNVTYSVIFKGLCRGWKHEN-CNH 594

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           V  + + EK  QG ++                M    I P+ +T++ I+    R      
Sbjct: 595 VLRERIFEKCKQGLRD----------------MESEGIPPDQITYNTIIQYLCRVKHLSG 638

Query: 664 ASMLLEELR 672
           A + LE ++
Sbjct: 639 AFVFLEIMK 647



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 181/363 (49%), Gaps = 16/363 (4%)

Query: 205 RLGKVDLAKNIFETALNEGYG-NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
           +LG +D+   + +  L+ G+  N++   S ++S   ++G   EA+S+FN MK   L P+L
Sbjct: 339 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 398

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
           V Y+ VI    K G  F   + ++D+M    + P+  T  +LL  +C +G L EA R+L 
Sbjct: 399 VAYSIVIHGLCKLG-KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA-RSLL 456

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           + ++  G   DI  YN ++D   K   ++ A E+   +    I+P+V T++++I GY K 
Sbjct: 457 DSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKT 516

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
             + +A  +   +K  G+    VSY T++  YA  G  +    + +EM++ GI    VTY
Sbjct: 517 QNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTY 576

Query: 443 NALLGGYGKQGKYDEV-----RRMFEQ-------MKADCVSPNLLTYSTLIDVYSKGGLY 490
           + +  G  +  K++        R+FE+       M+++ + P+ +TY+T+I    +    
Sbjct: 577 SVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL 636

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             A       K   L A    Y+ LID+LC  G +  A S +  + ++ +  +   Y ++
Sbjct: 637 SGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTL 696

Query: 551 IDA 553
           I A
Sbjct: 697 IKA 699



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 155/342 (45%), Gaps = 15/342 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L +LGK D+A  +++   ++          AL+    + G   EA S+ +S+  
Sbjct: 402 SIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 461

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
                ++V YN VID   K G   +  +E+F  ++  G+ P   TFNSL+   C    + 
Sbjct: 462 SGETLDIVLYNIVIDGYAKSGC-IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA R + + +   G+   + +Y TL+DA           E+  EM A+ I P  VTYS +
Sbjct: 521 EA-RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579

Query: 376 IDGYAKAGRLDDALNMFSE------------MKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
             G  +  + ++  ++  E            M+  GI  D+++YNT++    ++     A
Sbjct: 580 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 639

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
            +  + M+S  +   + TYN L+      G   +       ++   VS +   Y+TLI  
Sbjct: 640 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 699

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           +   G  + A+++F +    G    +  YSA+I+ LC+  L+
Sbjct: 700 HCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLM 741



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 123/287 (42%), Gaps = 51/287 (17%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L + +I    + G ++ A  +F+  +  G   +V  F++LI  Y ++    EA  + + +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529

Query: 255 KRYNLKPNLVTYNAVIDA---CGKG----------------------GVDFK-------- 281
           K Y L P++V+Y  ++DA   CG                         V FK        
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 589

Query: 282 ----HVVE--IFD-------DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
               HV+   IF+       DM   G+ PD+IT+N+++    R      A      M  R
Sbjct: 590 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 649

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            +D    TYN L+D++C    +  A   +  +  +N+S +   Y+T+I  +   G  + A
Sbjct: 650 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + +F ++   G  +    Y+ V++   +L R    L+ C   +S+G+
Sbjct: 710 VKLFHQLLHRGFNVSIRDYSAVIN---RLCR--RHLMNCFPGQSNGV 751


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 196/354 (55%), Gaps = 4/354 (1%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY---GRSGYCQEAISVFNSMKR 256
           I+ L + GK++ A+++ E     G+   +  ++ LI  +   G +G    A ++   M  
Sbjct: 207 INGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLA 266

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN +T+N +ID   K   +       F++M R G++P+ +T+NSL+   S  G  +
Sbjct: 267 NKICPNEITFNTLIDGFCKDE-NVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLD 325

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L+++MV  G+  +I T+N L++  CK   +  A ++  ++  +++ PN +T++TMI
Sbjct: 326 EAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMI 385

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D + KAG +++   + + M   GI  +  +YN +++   +      A  +  EME+  ++
Sbjct: 386 DAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELK 445

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTYN L+GG+ K G+  +  ++  +M    V PN +TY+TL+D Y   G  K A+++
Sbjct: 446 ADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKV 505

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             + ++ G +A+VV Y+ LI   CK G +E A  LL+EM ++G+ PN  TY+ +
Sbjct: 506 RTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 177/334 (52%), Gaps = 2/334 (0%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE-IF 287
            F+  I+   ++G   +A  V   +K +   PN+VTYN +ID  C KG     +  + I 
Sbjct: 202 TFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAIL 261

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            +ML N + P+ ITFN+L+    +     AA+N F EM  +G+  +I TYN+L++ +   
Sbjct: 262 KEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNN 321

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            ++D A  +  +M    + PN+VT++ +I+G+ K   + +A  +F ++    +  + +++
Sbjct: 322 GKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITF 381

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           NT++  + K G  EE   +   M   GI  +  TYN L+ G  +       +++  +M+ 
Sbjct: 382 NTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMEN 441

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             +  +++TY+ LI  + K G   +A ++  E    G+K + V Y+ L+D  C  G +++
Sbjct: 442 YELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKA 501

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           A+ +  +M KEG R NVVTYN +I  F ++   E
Sbjct: 502 ALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLE 535



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 192/372 (51%), Gaps = 5/372 (1%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  +F    + G+  ++ + + L+SA  +     E   V+  M +  ++PNL T+N  I+
Sbjct: 149 ACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFIN 208

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG--GLWEAARNLFNEMVHR 328
              K G       ++ +D+   G  P+ +T+N+L+   C +G  G    A  +  EM+  
Sbjct: 209 GLCKAG-KLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLAN 267

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            I  +  T+NTL+D  CK   +  A     EM  + + PN+VTY+++I+G +  G+LD+A
Sbjct: 268 KICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEA 327

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           + ++ +M  LG+  + V++N +++ + K    +EA  +  ++    +  +A+T+N ++  
Sbjct: 328 IALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDA 387

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           + K G  +E   +   M  + + PN+ TY+ LI    +    + A ++  E +   LKAD
Sbjct: 388 FCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKAD 447

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
           VV Y+ LI   CK+G    A  LL EM   G++PN VTYN+++D +      +  +  V 
Sbjct: 448 VVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAAL-KVR 506

Query: 569 RDLGKQKESANL 580
             + K+ + AN+
Sbjct: 507 TQMEKEGKRANV 518



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 199/401 (49%), Gaps = 21/401 (5%)

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           E+F  +   G +    + N LL+   +G      + ++ EM+ R I  ++ T+N  ++ +
Sbjct: 151 EVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGL 210

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK---AGRLDDALNMFSEMKFLGIG 401
           CK  +++ A +++ ++ A   SPN+VTY+T+IDG+ K   AG++  A  +  EM    I 
Sbjct: 211 CKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKIC 270

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + +++NT++  + K      A    +EM+  G++ + VTYN+L+ G    GK DE   +
Sbjct: 271 PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIAL 330

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           +++M    + PN++T++ LI+ + K  + KEA ++F +  +  L  + + ++ +IDA CK
Sbjct: 331 WDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCK 390

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
            G++E   +L + M  EGI PNV TYN +I    R+           + L  + E+  L 
Sbjct: 391 AGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAA-----KKLLNEMENYELK 445

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL----CILG------ 631
           A       ++   G   +       +L+ E    G K N      L    C+ G      
Sbjct: 446 A--DVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAAL 503

Query: 632 -VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            V  +M K   + NVVT++ ++    +    EDA+ LL E+
Sbjct: 504 KVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEM 544



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 163/322 (50%), Gaps = 1/322 (0%)

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
           G  GK+  A  I +  L          F+ LI  + +      A + F  M+R  LKPN+
Sbjct: 249 GSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNI 308

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           VTYN++I+     G      + ++D M+  G++P+ +TFN+L+    +  + + AR LF+
Sbjct: 309 VTYNSLINGLSNNG-KLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFD 367

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           ++  + +  +  T+NT++DA CK   M+  F +   M  + I PNV TY+ +I G  +  
Sbjct: 368 DIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQ 427

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            +  A  + +EM+   +  D V+YN ++  + K G   +A  +  EM + G++ + VTYN
Sbjct: 428 NVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYN 487

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+ GY  +G      ++  QM+ +    N++TY+ LI  + K G  ++A ++  E  + 
Sbjct: 488 TLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEK 547

Query: 504 GLKADVVLYSALIDALCKNGLV 525
           GL  +   Y  +   + + G +
Sbjct: 548 GLNPNRTTYDVVRLEMLEKGFI 569



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 173/400 (43%), Gaps = 33/400 (8%)

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           N +    ++  Y     +  A  +F  ++  G  L   S N +LS   K     E   V 
Sbjct: 129 NALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVY 188

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK- 486
           KEM    I+ +  T+N  + G  K GK ++   + E +KA   SPN++TY+TLID + K 
Sbjct: 189 KEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKK 248

Query: 487 ---GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
              G +Y+ A  I +E     +  + + ++ LID  CK+  V +A +  +EM ++G++PN
Sbjct: 249 GSAGKMYR-ADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPN 307

Query: 544 VVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
           +VTYNS+I+    +   +  +   D    LG +      +A+ +         G    ++
Sbjct: 308 IVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALIN---------GFCKKKM 358

Query: 602 IKVFGQLVAEKAGQGKKEN----RCRQEILCILGVFQKMHKLK-------IKPNVVTFSA 650
           IK   +L  + A Q    N        +  C  G+ ++   L        I PNV T++ 
Sbjct: 359 IKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNC 418

Query: 651 ILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMD 708
           ++    R  +   A  LL E+  ++ +   V + +L+G   +D    +A  L  E+  + 
Sbjct: 419 LIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVG 478

Query: 709 SSTASAFYNALTDMLWHFGQKRGAQLVVL----EGKRRQV 744
                  YN L D     G  + A  V      EGKR  V
Sbjct: 479 VKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANV 518


>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 845

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/537 (25%), Positives = 245/537 (45%), Gaps = 62/537 (11%)

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   D  TY T++  + +  Q      ++ EM      PN VTY+ +I  Y +A  L++A
Sbjct: 344 GFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEA 403

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           +N+F +M+  G   DRV+Y T++ I+AK G  + A+ + + M+++G+  D  TY+ ++  
Sbjct: 404 MNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINC 463

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            GK G      R+F +M     +PNL+T++ +I +++K   Y+ A++++R+ + AG + D
Sbjct: 464 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 523

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            V YS +++ L   G +E A  +  EM ++   P+   Y  ++D +G++        +VE
Sbjct: 524 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAG-------NVE 576

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
           +     +E  +           ++    T N ++  F  L   +  +             
Sbjct: 577 KAWQWYQEMLH---------AGLRPNVPTCNSLLSTF--LRVHRMSEA------------ 613

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV----AHG 684
              + Q M  L + P++ T++ +L+ C+   S  D          F  Q+  V    AH 
Sbjct: 614 -YNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMG--------FCGQLMAVSGHPAHM 664

Query: 685 LLM----------GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
            L+            RD++     +  D +   D  +     +A+ D L   G K  A  
Sbjct: 665 FLLKMPPAGPDGQKVRDHV----SNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGS 720

Query: 735 VVLEGKRRQVWENVWSE-SC----LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLL 789
           V      + V+ +   E SC    ++LH+MS G A   +   L      +    + P  +
Sbjct: 721 VWEVAAVKNVYPDALREKSCSYWLINLHVMSEGTAVIALSRTLAWFRKQMLVTGDCPSRI 780

Query: 790 SILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRES 846
            I+TGWG+ S+V G   +R+AVE LL     PF+  N N G F+  G  +  WL ES
Sbjct: 781 DIVTGWGRRSRVTGTSMVRQAVEELLNIFNFPFFTENGNSGCFVGCGEPLKKWLLES 837



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 162/306 (52%), Gaps = 2/306 (0%)

Query: 247 AISVFNSMKRY-NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A+  F  +KR    K +  TY  ++   G+    F  +  + D+M+++G +P+ +T+N L
Sbjct: 332 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK-QFGAINRLLDEMVKDGCKPNTVTYNRL 390

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    R      A N+F +M   G + D  TY TL+D   K   +D+A ++   M A  +
Sbjct: 391 IHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGL 450

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           SP+  TYS +I+   KAG L  A  +F EM   G   + V++N +++++AK   +E AL 
Sbjct: 451 SPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALK 510

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + ++M+++G + D VTY+ ++   G  G  +E   +F +M+     P+   Y  L+D++ 
Sbjct: 511 LYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWG 570

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G  ++A Q ++E   AGL+ +V   ++L+    +   +  A +LL  M   G+ P++ 
Sbjct: 571 KAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQ 630

Query: 546 TYNSII 551
           TY  ++
Sbjct: 631 TYTLLL 636



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 131/263 (49%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G + D  T+ +++    R   + A   L +EMV  G   +  TYN L+ +  +   ++ A
Sbjct: 344 GFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEA 403

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             +  +M      P+ VTY T+ID +AKAG LD A++M+  M+  G+  D  +Y+ +++ 
Sbjct: 404 MNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINC 463

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
             K G    A  +  EM   G   + VT+N ++  + K   Y+   +++  M+     P+
Sbjct: 464 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 523

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +TYS +++V    G  +EA  +F E ++     D  +Y  L+D   K G VE A     
Sbjct: 524 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQ 583

Query: 534 EMTKEGIRPNVVTYNSIIDAFGR 556
           EM   G+RPNV T NS++  F R
Sbjct: 584 EMLHAGLRPNVPTCNSLLSTFLR 606



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 166/357 (46%), Gaps = 23/357 (6%)

Query: 125 AEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVK 184
           AEEALH+   F  D      +LK+        D+Y      LG           F + +K
Sbjct: 303 AEEALHNF-GFRMDAYQANQVLKQM-------DNYA---NALG-----------FFYWLK 340

Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
           R+      G   + M+  LGR  +      + +  + +G       ++ LI +YGR+ Y 
Sbjct: 341 RQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYL 400

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
            EA++VF  M+    +P+ VTY  +ID   K G      ++++  M   G+ PD  T++ 
Sbjct: 401 NEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGF-LDIAMDMYQRMQAAGLSPDTFTYSV 459

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           ++    + G   AA  LF EMV +G   ++ T+N ++    K    + A ++  +M    
Sbjct: 460 IINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAG 519

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
             P+ VTYS +++     G L++A  +F+EM+      D   Y  ++ ++ K G  E+A 
Sbjct: 520 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKAW 579

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
              +EM  +G+R +  T N+LL  + +  +  E   + + M A  + P+L TY+ L+
Sbjct: 580 QWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 636



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 131/299 (43%), Gaps = 1/299 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I I  + G +D+A ++++     G     + +S +I+  G++G+   A  +F  M    
Sbjct: 425 LIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG 484

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             PNLVT+N +I    K   +++  ++++ DM   G QPD++T++ ++ V    G  E A
Sbjct: 485 CTPNLVTFNIMIALHAKA-RNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEA 543

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +F EM  +    D   Y  L+D   K   ++ A++   EM    + PNV T ++++  
Sbjct: 544 EGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLST 603

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           + +  R+ +A N+   M  LG+     +Y  +LS         +     + M  SG    
Sbjct: 604 FLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSGHPAH 663

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
                    G   Q   D V    + M ++           ++D   K GL +EA  ++
Sbjct: 664 MFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVW 722



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 58/243 (23%)

Query: 490 YKEAMQIFREFK-QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
           Y  A+  F   K Q G K D   Y+ ++  L +     +   LLDEM K+G +PN VTYN
Sbjct: 329 YANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYN 388

Query: 549 SIIDAFGRS---------------------ATTECTVDDVERDLGKQKESANLDAMCSQD 587
            +I ++GR+                       T CT+ D+    G    + ++       
Sbjct: 389 RLIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDM------- 441

Query: 588 DKDVQEAGRTDNQ-----IIKVFGQ---------LVAEKAGQGKKENRCRQEIL------ 627
            + +Q AG + +      II   G+         L  E  GQG   N     I+      
Sbjct: 442 YQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAK 501

Query: 628 -----CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQV 678
                  L +++ M     +P+ VT+S ++     C   E+A  +  E++    + D  V
Sbjct: 502 ARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPV 561

Query: 679 YGV 681
           YG+
Sbjct: 562 YGL 564


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 204/439 (46%), Gaps = 43/439 (9%)

Query: 163 LRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE 222
           LR L   GE  +  +     V R +  +      +++I  L + GK   A  + E   + 
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIA--CTSLIRGLCKTGKTWKATRVMEILEDS 174

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    V  ++ LIS Y ++G   E  S    + R ++ P++VTYN ++      G   K 
Sbjct: 175 GAVPDVITYNVLISGYCKTG---EIGSALQLLDRMSVSPDVVTYNTILRTLCDSG-KLKE 230

Query: 283 VVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            +E+ D  ++    PD IT+  L+ A C   G+ +A + L +EM  +G   D+ TYN L+
Sbjct: 231 AMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMK-LLDEMRDKGCKPDVVTYNVLI 289

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM------ 395
           + ICK  ++D A   +  MP+    PNV+T++ ++      GR  DA    +EM      
Sbjct: 290 NGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCS 349

Query: 396 ----------KFL-------------------GIGLDRVSYNTVLSIYAKLGRFEEALLV 426
                      FL                   G   + +SYN +L    K  + E A+  
Sbjct: 350 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEY 409

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
              M S G   D VTYN LL    K GK D    +  Q+ +   SP L+TY+T+ID  SK
Sbjct: 410 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSK 469

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G   +A+++  E K  GLK D++ YS L+  L + G V+ A++   ++ + G++PN +T
Sbjct: 470 VGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAIT 529

Query: 547 YNSIIDAFGRSATTECTVD 565
           YNSI+    ++  T   +D
Sbjct: 530 YNSIMLGLCKARQTVRAID 548



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 213/451 (47%), Gaps = 37/451 (8%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R G+++      E  +  G    + A ++LI    ++G   +A  V   ++     P+
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
           ++TYN +I    K G +    +++ D M    V PD +T+N++L  +C  G L EA   L
Sbjct: 180 VITYNVLISGYCKTG-EIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVL 235

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             +M  R    D+ TY  L++A CK + +  A +++ EM  K   P+VVTY+ +I+G  K
Sbjct: 236 DRQM-QRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICK 294

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            GRLD+A+   + M   G   + +++N +L      GR+ +A     EM   G     VT
Sbjct: 295 EGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVT 354

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           +N L+    ++G       + E+M     +PN L+Y+ L+    K    + A++      
Sbjct: 355 FNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMV 414

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G   D+V Y+ L+ ALCK+G V+ AV +L+++  +G  P ++TYN++ID   +   T 
Sbjct: 415 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT- 473

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
              DD  + L + K                   G+     I  +  LV   + +GK +  
Sbjct: 474 ---DDAIKLLDEMK-------------------GKGLKPDIITYSTLVGGLSREGKVDEA 511

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
                   +  F  + ++ +KPN +T+++I+
Sbjct: 512 --------IAFFHDLEEMGVKPNAITYNSIM 534



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 192/383 (50%), Gaps = 5/383 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +LR L + G+  +A++     ++RE   +      + +I    +   V  A  + + 
Sbjct: 215 YNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVI--TYTILIEATCKESGVGQAMKLLDE 272

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
             ++G    V  ++ LI+   + G   EAI   N M  Y  +PN++T+N ++ + C  G 
Sbjct: 273 MRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTG- 331

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             +    +   +M+R G  P  +TFN L+    R GL   A ++  +M   G   +  +Y
Sbjct: 332 -RWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSY 390

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N LL A+CK  +M+ A E +  M ++   P++VTY+T++    K G++D A+ + +++  
Sbjct: 391 NPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGS 450

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G     ++YNTV+   +K+G+ ++A+ +  EM+  G++ D +TY+ L+GG  ++GK DE
Sbjct: 451 KGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDE 510

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
               F  ++   V PN +TY++++    K      A+         G K     Y  LI+
Sbjct: 511 AIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIE 570

Query: 518 ALCKNGLVESAVSLLDEMTKEGI 540
            L   GL + A+ LL+E+   G+
Sbjct: 571 GLAYEGLAKEALELLNELCSRGV 593



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 176/349 (50%), Gaps = 3/349 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A  + +  +       V  ++ LI A  +     +A+ + + M+    KP++VTY
Sbjct: 226 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 285

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +I+  C +G +D    +   + M   G QP+ IT N +L      G W  A     EM
Sbjct: 286 NVLINGICKEGRLD--EAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEM 343

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           + +G    + T+N L++ +C+   +  A +++ +MP    +PN ++Y+ ++    K  ++
Sbjct: 344 IRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKM 403

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           + A+     M   G   D V+YNT+L+   K G+ + A+ +  ++ S G     +TYN +
Sbjct: 404 ERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTV 463

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K GK D+  ++ ++MK   + P+++TYSTL+   S+ G   EA+  F + ++ G+
Sbjct: 464 IDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGV 523

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           K + + Y++++  LCK      A+  L  M   G +P   +Y  +I+  
Sbjct: 524 KPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGL 572



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 175/408 (42%), Gaps = 58/408 (14%)

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           R G  E       +MV RG   DI    +L+  +CK  +   A  +M  +      P+V+
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV---- 426
           TY+ +I GY K G +  AL +   M    +  D V+YNT+L      G+ +EA+ V    
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238

Query: 427 -------------------CK------------EMESSGIRKDAVTYNALLGGYGKQGKY 455
                              CK            EM   G + D VTYN L+ G  K+G+ 
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           DE  R    M +    PN++T++ ++      G + +A +   E  + G    VV ++ L
Sbjct: 299 DEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNIL 358

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGK 573
           I+ LC+ GL+  A+ +L++M + G  PN ++YN ++ A  +    E  ++  D+    G 
Sbjct: 359 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGC 418

Query: 574 QKESAN----LDAMCSQDDKDV------QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
             +       L A+C     DV      Q   +  + ++  +  ++   +  GK ++  +
Sbjct: 419 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIK 478

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                   +  +M    +KP+++T+S ++   SR    ++A     +L
Sbjct: 479 --------LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDL 518



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 134/284 (47%), Gaps = 9/284 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           +  +LR + + G W  A +  A  +    RK     + +   +I+ L R G +  A ++ 
Sbjct: 320 HNIILRSMCSTGRWMDAEKFLAEMI----RKGCSPSVVTFNILINFLCRKGLIGRAIDVL 375

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
           E     G      +++ L+ A  +    + AI   + M      P++VTYN ++ A C  
Sbjct: 376 EKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKD 435

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G VD    VEI + +   G  P  IT+N+++   S+ G  + A  L +EM  +G+  DI 
Sbjct: 436 GKVDV--AVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDII 493

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TY+TL+  + +  ++D A     ++    + PN +TY++++ G  KA +   A++  + M
Sbjct: 494 TYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYM 553

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
              G      SY  ++   A  G  +EAL +  E+ S G+ K +
Sbjct: 554 VARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKS 597



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 119/279 (42%), Gaps = 36/279 (12%)

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           + G+ +E  +  E M      P+++  ++LI    K G   +A ++    + +G   DV+
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y+ LI   CK G + SA+ LLD M+   + P+VVTYN+I+        T C       D
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTIL-------RTLC-------D 224

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
            GK KE+  +       D+ +Q     D     +  +   +++G G+            +
Sbjct: 225 SGKLKEAMEVL------DRQMQRECYPDVITYTILIEATCKESGVGQA-----------M 267

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYR 690
            +  +M     KP+VVT++ ++N   +    ++A   L  +  +  Q   + H +++   
Sbjct: 268 KLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSM 327

Query: 691 DNI--WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
            +   W+ A     E+     S +   +N L + L   G
Sbjct: 328 CSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKG 366


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 182/346 (52%), Gaps = 13/346 (3%)

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
           AL+ G  N V      ++A    G   +A+ +   +  +  +P++V+YNAV+    KG  
Sbjct: 189 ALDVGNCNLV------LNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVL----KGLC 238

Query: 279 DFKH---VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
             K    V E+ ++M+R    P+ +TFN+L++   R GL+E    +  +M   G   DI 
Sbjct: 239 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIR 298

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            Y T++D ICK   + +A EI+  MP+  + PNVV Y+T++ G   A R ++   + +EM
Sbjct: 299 MYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
                 LD V++N ++  + + G  +  + + ++M   G   D +TY  ++ G+ K+G  
Sbjct: 359 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLI 418

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           DE   + + M A    PN ++Y+ ++        + +A  +  +  Q G   + + ++ L
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           I+ LCK GLVE A+ LL +M   G  P++++Y+++ID  G++  T+
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 176/355 (49%), Gaps = 1/355 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS L R G  +    +       G    +  ++ +I    + G+ + A  + N M  
Sbjct: 266 NTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPS 325

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           Y LKPN+V YN ++         ++   E+  +M       D +TFN L+    + GL +
Sbjct: 326 YGLKPNVVCYNTLLKGLCSAE-RWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD 384

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               L  +M+  G   D+ TY T+++  CK   +D A  ++  M A    PN ++Y+ ++
Sbjct: 385 RVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVL 444

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G   A R  DA ++ S+M   G  L+ +++NT+++   K G  E+A+ + K+M  +G  
Sbjct: 445 KGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCS 504

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D ++Y+ ++ G GK GK DE   +   M    +SPN + YS++    S+ G   + +Q+
Sbjct: 505 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQM 564

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           F   +   +++D VLY+A+I +LCK G  E A+  L  M   G  PN  TY  +I
Sbjct: 565 FDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 619



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 170/350 (48%), Gaps = 3/350 (0%)

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
           + + E  +       +  F+ LIS   R+G  +    V   M  +   P++  Y  +ID 
Sbjct: 247 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDG 306

Query: 273 -CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            C +G +   H  EI + M   G++P+ + +N+LL        WE    L  EM  +   
Sbjct: 307 ICKEGHLKVAH--EILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCP 364

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  T+N L+D  C+   +D   E++ +M      P+V+TY+T+I+G+ K G +D+A+ +
Sbjct: 365 LDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVML 424

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
              M   G   + +SY  VL       R+ +A  +  +M   G   + +T+N L+    K
Sbjct: 425 LKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCK 484

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           +G  ++   + +QM  +  SP+L++YST+ID   K G   EA+++       G+  + ++
Sbjct: 485 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII 544

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           YS++  AL + G +   + + D +    IR + V YN++I +  +   TE
Sbjct: 545 YSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 594



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/525 (23%), Positives = 237/525 (45%), Gaps = 44/525 (8%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           ++A+++ Y R+G  + A  +  ++    + PN  TY  V+ A C +G +     + + D+
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRI--ADALAVLDE 147

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M R G  P    ++ +L    RGG + +A  +  ++  RG   D+   N +L+AIC    
Sbjct: 148 MPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGS 207

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A  ++ ++P+    P+VV+Y+ ++ G   A R      +  EM  +    + V++NT
Sbjct: 208 VDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++S   + G FE    V  +M   G   D   Y  ++ G  K+G       +  +M +  
Sbjct: 268 LISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYG 327

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + PN++ Y+TL+        ++E  ++  E        D V ++ L+D  C+NGLV+  +
Sbjct: 328 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 387

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKESAN----LDAM 583
            LL++M   G  P+V+TY ++I+ F +    +  V  ++     G +  + +    L  +
Sbjct: 388 ELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 447

Query: 584 CSQ----DDKDVQ----EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
           CS     D +D+     + G   N I   F  L+     +G  E          + + ++
Sbjct: 448 CSAERWVDAEDLMSQMIQQGCPLNPI--TFNTLINFLCKKGLVEQA--------IELLKQ 497

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQ-------VY-GVAHGLLM 687
           M      P+++++S +++   +    ++A   LE L +  N+       +Y  +A  L  
Sbjct: 498 MLVNGCSPDLISYSTVIDGLGKAGKTDEA---LELLNVMVNKGMSPNTIIYSSIASALSR 554

Query: 688 GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
             R N  +Q   +FD ++     + +  YNA+   L   G+   A
Sbjct: 555 EGRINKVIQ---MFDNIQDTTIRSDAVLYNAVISSLCKRGETERA 596



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 143/275 (52%), Gaps = 3/275 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           F+ L+  + ++G     I +   M  +   P+++TY  VI+  C +G +D    V +   
Sbjct: 370 FNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLID--EAVMLLKS 427

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G +P+ I++  +L        W  A +L ++M+ +G   +  T+NTL++ +CK   
Sbjct: 428 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 487

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++ A E++ +M     SP++++YST+IDG  KAG+ D+AL + + M   G+  + + Y++
Sbjct: 488 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 547

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           + S  ++ GR  + + +   ++ + IR DAV YNA++    K+G+ +        M +  
Sbjct: 548 IASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG 607

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
             PN  TY+ LI   +  G  KEA ++  E    G
Sbjct: 608 CVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 189/359 (52%), Gaps = 3/359 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S + S + R+G  +    + +     G    +++ S LI+ +         +SV + + +
Sbjct: 66  SKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILK 125

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             L+P++VT+  +++  C +G +D   V+ ++DDML  G+QP+  T+N ++   S+ G  
Sbjct: 126 LGLEPSIVTFTTLLNGLCMEGKMD--QVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKA 183

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A     +M   G   ++  Y+TL+D  C   QMD A  +   M +K  +PNV TY+++
Sbjct: 184 NEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSL 243

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ++GY K  R+++A+ +  E    G+  D V++ T++S   + GR   A  + + + + G 
Sbjct: 244 MNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGH 303

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + +TY  LL G  K G  +E   +F++M+   V PNL+ Y+ LID   K G  K+  +
Sbjct: 304 TPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKE 363

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +F      GLK +V  Y+AL+ ALCK GL+  A  L  +M ++G  P+   YN II  F
Sbjct: 364 LFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGF 422



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 185/332 (55%), Gaps = 3/332 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           +  FS L S+  R G+ +  + +   ++   ++ ++ + + +I+  C    VDF   + +
Sbjct: 62  IVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFG--LSV 119

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              +L+ G++P  +TF +LL      G  +    L+++M+ RG+  +++TYN +++++ K
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             + + A   + +M      PNVV YST+IDGY   G++D+A ++F  M   G   +  +
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y ++++ Y K+ R EEA+ +  E    G+  D VT+  ++ G  + G+    +++F  + 
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYIC 299

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           A   +PN++TY  L+D   K G  +EA  +F+E +++ +K ++V+Y+ LID+LCK G ++
Sbjct: 300 AHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIK 359

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
               L   +  EG++PNV TY +++ A  +  
Sbjct: 360 DGKELFSRLIDEGLKPNVYTYTALVGALCKEG 391



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 180/351 (51%), Gaps = 3/351 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+    L +VD   ++    L  G   ++  F+ L++     G   + + +++ M  
Sbjct: 101 SILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLV 160

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             L+PN+ TYN +I++  K G      +     M + G  P+ + +++L+   C RG + 
Sbjct: 161 RGLQPNVYTYNVIINSLSKSG-KANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMD 219

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA R++F+ MV +G   +++TY +L++  CK  +++ A +++ E   K + P++VT++T+
Sbjct: 220 EA-RSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTI 278

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G  +AGR   A  +F  +   G   + ++Y  +L    K G  EEA  + +EM+ S +
Sbjct: 279 ISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTV 338

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + V Y  L+    K GK  + + +F ++  + + PN+ TY+ L+    K GL  EA +
Sbjct: 339 KPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHK 398

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
           +FR+ ++ G   D   Y+ +I    ++     A  L++EM   G   +  T
Sbjct: 399 LFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 148/275 (53%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F  ML     P  + F+ L +   R G +E    L  E+   GI+QDI + + L++  C 
Sbjct: 50  FRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCH 109

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++D    +++++    + P++VT++T+++G    G++D  + ++ +M   G+  +  +
Sbjct: 110 LHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYT 169

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN +++  +K G+  EAL   K+ME  G   + V Y+ L+ GY  +G+ DE R +F+ M 
Sbjct: 170 YNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMV 229

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           +   +PN+ TY++L++ Y K    +EA+Q+  E  + GL  D+V ++ +I  LC+ G   
Sbjct: 230 SKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPL 289

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +A  L   +   G  PN++TY  ++D   +    E
Sbjct: 290 AAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLE 324



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 154/312 (49%), Gaps = 3/312 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+D    +++  L  G    VY ++ +I++  +SG   EA+     M++    PN+V Y
Sbjct: 146 GKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNY 205

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           + +ID  C +G +D      +FD M+  G  P+  T+ SL+    +    E A  L +E 
Sbjct: 206 STLIDGYCLRGQMD--EARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDET 263

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           + +G+  DI T+ T++  +C+  +   A ++   + A   +PN++TY  ++DG  K G L
Sbjct: 264 LRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNL 323

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           ++A  +F EM+   +  + V Y  ++    K G+ ++   +   +   G++ +  TY AL
Sbjct: 324 EEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTAL 383

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +G   K+G   E  ++F +M+ D  +P+   Y+ +I  + +      A Q+  E    G 
Sbjct: 384 VGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGF 443

Query: 506 KADVVLYSALID 517
            AD    + L D
Sbjct: 444 SADAATRALLND 455



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 173/388 (44%), Gaps = 31/388 (7%)

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P +V +S +     + G  +  + +  E++FLGI  D  S + +++ +  L R +  L V
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
             ++   G+    VT+  LL G   +GK D+V  +++ M    + PN+ TY+ +I+  SK
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G   EA+   ++ ++ G   +VV YS LID  C  G ++ A S+ D M  +G  PNV T
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGK------QKESANLDAMC--------SQDDKDVQ 592
           Y S+++ + +    E  V  ++  L K         +  +  +C         Q  + + 
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYIC 299

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
             G T N  I  +G L+      G  E            +FQ+M +  +KPN+V ++ ++
Sbjct: 300 AHGHTPN--IMTYGVLLDGLCKHGNLEEA--------FALFQEMQRSTVKPNLVIYTILI 349

Query: 653 NACSRCNSFEDASMLLEELRLFDN----QVYGVAHGLLMGYRDNIWVQALSLFDEVKLMD 708
           ++  +C   +D   L    RL D      VY     +    ++ + ++A  LF +++   
Sbjct: 350 DSLCKCGKIKDGKELFS--RLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDG 407

Query: 709 SSTASAFYNALTD-MLWHFGQKRGAQLV 735
            +     YN +    L H       QLV
Sbjct: 408 CTPDKCAYNVIIQGFLQHKDPSMARQLV 435


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 223/469 (47%), Gaps = 35/469 (7%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G +  A+ +      +G   T   ++ L+SA+ R G+ ++A  V  SM  Y  +P+L 
Sbjct: 255 RKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLR 314

Query: 265 TYNAV-IDACGKGGVDFKHVVEIFDDMLRNGVQ-PDRITFNSLLAVCSRGGLWEAARNLF 322
           TYN + +  C  G VD      + D+M R G   PD +T+N+L+  C +      A  L 
Sbjct: 315 TYNVLAMGLCQAGKVD--EAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLL 372

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            EM  +G+   + T+N ++ ++CK  +++ A   + ++  + ++P+V+TY+T+ID Y KA
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA 432

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G +  A  +  EM   G+ +D  + NTVL    K+ R+E+A  +       G   D V+Y
Sbjct: 433 GNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSY 492

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             ++  Y K+   +   R+++QM    + P++ TY+TLI    +    KEA+    EF +
Sbjct: 493 GTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVE 552

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
            GL  D   Y+ +I A CK G +E+A    ++M +   +P+VVT N++++         C
Sbjct: 553 KGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGL-------C 605

Query: 563 TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
                            LD      +  V++  + D   +  +  L+      G      
Sbjct: 606 L-------------HGKLDKALKLFESWVEKGKKVD---VITYNTLIQSMCKVG------ 643

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             ++   L  F  M    ++P+  T++ +L+A S     E+A  +L +L
Sbjct: 644 --DVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKL 690



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 150/568 (26%), Positives = 256/568 (45%), Gaps = 49/568 (8%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYC--QEAISVF 251
           LA A +S   RL    LA  +  +     G   ++ A +A++SA  RS     Q ++ VF
Sbjct: 137 LADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVF 196

Query: 252 NSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCS 310
            S+    L PN  T+N ++   C KG +     +     M   G+ PD +T+N+LL    
Sbjct: 197 RSLIELRLHPNHYTFNLLVHTHCSKGTL--ADALATLSTMQGFGLSPDAVTYNTLLNAHC 254

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           R G+   AR L   M   GI     TYNTL+ A  +   +  A +++  M A    P++ 
Sbjct: 255 RKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLR 314

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL-DRVSYNTVLSIYAKLGRFEEALLVCKE 429
           TY+ +  G  +AG++D+A  +  EM+ LG  L D V+YNT++    K     +AL + +E
Sbjct: 315 TYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEE 374

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M   G++   VT+N ++    K+GK +E     E++  + ++P+++TY+TLID Y K G 
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
             +A  +  E    GLK D    + ++  LCK    E A  LL    + G  P+ V+Y +
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494

Query: 550 IIDAFGRSATTECTV----DDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIK 603
           ++ A+ +    E  +      +ER L     + N  +  +C  +   ++EA    N+ ++
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMER--LKEAIDKLNEFVE 552

Query: 604 --------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
                    +  ++     +G  EN  R           KM +   KP+VVT + ++N  
Sbjct: 553 KGLVPDETTYNIIIHAYCKEGDLENAFR--------FHNKMVENSFKPDVVTCNTLMNGL 604

Query: 656 SRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQ----------ALSLFDEVK 705
                 + A      L+LF++ V       ++ Y  N  +Q          AL  FD+++
Sbjct: 605 CLHGKLDKA------LKLFESWVEKGKKVDVITY--NTLIQSMCKVGDVDTALHFFDDME 656

Query: 706 LMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           +      +  YN +   L   G+   A 
Sbjct: 657 VKGLQPDAFTYNVVLSALSEAGRSEEAH 684



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 158/328 (48%), Gaps = 1/328 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + E   ++G   T+   + ++ +  + G  +EA+     +    L P+++TYN +ID
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           A  K G +      + D+M+  G++ D  T N++L    +   +E A  L +    RG  
Sbjct: 428 AYCKAG-NVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFV 486

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  +Y T++ A  K    + A  +  +M  + + P++ TY+T+I G  +  RL +A++ 
Sbjct: 487 PDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDK 546

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
            +E    G+  D  +YN ++  Y K G  E A     +M  +  + D VT N L+ G   
Sbjct: 547 LNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCL 606

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            GK D+  ++FE         +++TY+TLI    K G    A+  F + +  GL+ D   
Sbjct: 607 HGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFT 666

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEG 539
           Y+ ++ AL + G  E A ++L ++   G
Sbjct: 667 YNVVLSALSEAGRSEEAHNMLHKLADSG 694



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/419 (23%), Positives = 188/419 (44%), Gaps = 42/419 (10%)

Query: 177 QCFAFAVKREERKNDQGKLAS-----AMISILGRLGKVDLAKNIFETALNEGYGNTVYAF 231
           +C + A++  E   D+G   +      ++  L + GK++ A    E    EG    V  +
Sbjct: 363 RCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITY 422

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           + LI AY ++G   +A ++ + M    LK +  T N V+    K    ++   E+     
Sbjct: 423 NTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMK-RYEDAEELLHSPP 481

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
           + G  PD +++ +++A   +    E A  L+++M+ R +   I TYNTL+  +C+  ++ 
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A + + E   K + P+  TY+ +I  Y K G L++A    ++M       D V+ NT++
Sbjct: 542 EAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           +     G+ ++AL + +     G + D +TYN L+    K G  D     F+ M+   + 
Sbjct: 602 NGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQ 661

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL----------------KADVV----- 510
           P+  TY+ ++   S+ G  +EA  +  +   +G                 +ADV      
Sbjct: 662 PDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGK 721

Query: 511 ---------------LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
                           Y   ++ LC  G ++ A ++LDEM ++G+  +  TY ++++  
Sbjct: 722 PEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGL 780



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 149/321 (46%), Gaps = 4/321 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L ++ + + A+ +  +    G+     ++  +++AY +    + A+ +++ M    L P+
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
           + TYN +I    +     K  ++  ++ +  G+ PD  T+N ++ A C  G L  A R  
Sbjct: 524 ISTYNTLIKGLCRME-RLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFR-F 581

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            N+MV      D+ T NTL++ +C   ++D A ++      K    +V+TY+T+I    K
Sbjct: 582 HNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCK 641

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G +D AL+ F +M+  G+  D  +YN VLS  ++ GR EEA  +  ++  SG    +  
Sbjct: 642 VGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFA 701

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL-TYSTLIDVYSKGGLYKEAMQIFREF 500
              L      +    E     E   ++    N L TY   ++    GG  KEA  +  E 
Sbjct: 702 CPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEM 761

Query: 501 KQAGLKADVVLYSALIDALCK 521
            Q G+  D   Y  L++ L K
Sbjct: 762 MQKGMPVDCSTYITLMEGLIK 782


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 250/489 (51%), Gaps = 23/489 (4%)

Query: 186 EERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           +E K+      S ++  L R  K++ A     T+  +  G +V +F++++S Y + G+  
Sbjct: 180 KEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVD 239

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
            A S F ++ +  L P++ ++N +I+  C  G +     +E+  DM ++GV+PD +T+N 
Sbjct: 240 MAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI--AEALELASDMNKHGVEPDSVTYNI 297

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L       G+   A  +  +M+ +G+  D+ TY  LL   C+   +D+   ++ +M ++ 
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357

Query: 365 ISPN-VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
              N ++  S M+ G  K GR+D+AL++F++MK  G+  D V+Y+ V+    KLG+F+ A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
           L +  EM    I  ++ T+ ALL G  ++G   E R + + + +   + +++ Y+ +ID 
Sbjct: 418 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 477

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y+K G  +EA+++F+   + G+   V  +++LI   CK   +  A  +LD +   G+ P+
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 537

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           VV+Y +++DA+     T+ ++D++ R++ K +     +   S   K +    + +N    
Sbjct: 538 VVSYTTLMDAYANCGNTK-SIDELRREM-KAEGIPPTNVTYSVIFKGLCRGWKHEN-CNH 594

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           V  + + EK  QG ++                M    I P+ +T++ I+    R      
Sbjct: 595 VLRERIFEKCKQGLRD----------------MESEGIPPDQITYNTIIQYLCRVKHLSG 638

Query: 664 ASMLLEELR 672
           A + LE ++
Sbjct: 639 AFVFLEIMK 647



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 181/363 (49%), Gaps = 16/363 (4%)

Query: 205 RLGKVDLAKNIFETALNEGYG-NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
           +LG +D+   + +  L+ G+  N++   S ++S   ++G   EA+S+FN MK   L P+L
Sbjct: 339 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 398

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
           V Y+ VI    K G  F   + ++D+M    + P+  T  +LL  +C +G L EA R+L 
Sbjct: 399 VAYSIVIHGLCKLG-KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA-RSLL 456

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           + ++  G   DI  YN ++D   K   ++ A E+   +    I+P+V T++++I GY K 
Sbjct: 457 DSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKT 516

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
             + +A  +   +K  G+    VSY T++  YA  G  +    + +EM++ GI    VTY
Sbjct: 517 QNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTY 576

Query: 443 NALLGGYGKQGKYDEV-----RRMFEQ-------MKADCVSPNLLTYSTLIDVYSKGGLY 490
           + +  G  +  K++        R+FE+       M+++ + P+ +TY+T+I    +    
Sbjct: 577 SVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL 636

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             A       K   L A    Y+ LID+LC  G +  A S +  + ++ +  +   Y ++
Sbjct: 637 SGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTL 696

Query: 551 IDA 553
           I A
Sbjct: 697 IKA 699



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 155/342 (45%), Gaps = 15/342 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L +LGK D+A  +++   ++          AL+    + G   EA S+ +S+  
Sbjct: 402 SIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 461

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
                ++V YN VID   K G   +  +E+F  ++  G+ P   TFNSL+   C    + 
Sbjct: 462 SGETLDIVLYNIVIDGYAKSGC-IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA R + + +   G+   + +Y TL+DA           E+  EM A+ I P  VTYS +
Sbjct: 521 EA-RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579

Query: 376 IDGYAKAGRLDDALNMFSE------------MKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
             G  +  + ++  ++  E            M+  GI  D+++YNT++    ++     A
Sbjct: 580 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 639

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
            +  + M+S  +   + TYN L+      G   +       ++   VS +   Y+TLI  
Sbjct: 640 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 699

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           +   G  + A+++F +    G    +  YSA+I+ LC+  L+
Sbjct: 700 HCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLM 741



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 123/287 (42%), Gaps = 51/287 (17%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L + +I    + G ++ A  +F+  +  G   +V  F++LI  Y ++    EA  + + +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529

Query: 255 KRYNLKPNLVTYNAVIDA---CGKG----------------------GVDFK-------- 281
           K Y L P++V+Y  ++DA   CG                         V FK        
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 589

Query: 282 ----HVVE--IFD-------DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
               HV+   IF+       DM   G+ PD+IT+N+++    R      A      M  R
Sbjct: 590 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 649

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            +D    TYN L+D++C    +  A   +  +  +N+S +   Y+T+I  +   G  + A
Sbjct: 650 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + +F ++   G  +    Y+ V++   +L R    L+ C   +S+G+
Sbjct: 710 VKLFHQLLHRGFNVSIRDYSAVIN---RLCR--RHLMNCFPGQSNGV 751


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 224/455 (49%), Gaps = 43/455 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    R G+VD A  +F+   N G    +Y++S LI  + + G   +A+ VF  MK 
Sbjct: 319 SILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKN 378

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVD---------------------------------FKH 282
             + P++ +Y+ +ID  C KG +D                                 F +
Sbjct: 379 SGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFAN 438

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            ++ F  M + G+ PD I  N +L++  R   +  A  L  +    G+  + ++YN  + 
Sbjct: 439 ALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIH 498

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            IC+G+  + A +++  M  +N+ P+VV YST+I  +AK    + A+ +F +M  +GI  
Sbjct: 499 RICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITF 558

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           +  +Y  +++++    + + A  + K M+ S +  D + Y +L+ G+   G+    R +F
Sbjct: 559 NVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALF 618

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           ++M  +  SPN++TY+  I+ Y K     +A +++ + K+ G+  D +LY+ LI A C  
Sbjct: 619 DEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNT 678

Query: 523 GLVESAVSLLDEMTKEG-IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
           G +  A +L DEM +EG   PNVV Y  +I+++      +    D    L ++  +  L 
Sbjct: 679 GEMNRAEALFDEMKQEGRCTPNVVMYTCLINSY-----IKLNKRDQAEKLYEEMRAKGLS 733

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
            +CS +   V E+    +Q++K  G+L   +A QG
Sbjct: 734 RLCSSEG-SVSESWCCRHQVLKT-GKL-GGRAKQG 765



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 246/520 (47%), Gaps = 35/520 (6%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC----QEAISVFNSMKRYNLKPNL 263
           +VD  + +FE  +  G    ++ ++ +++ + R   C    + A  +   +      PN+
Sbjct: 186 RVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNV 245

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           VTY   I    K G+ F     +  ++ R     +   FN+++    +GG+ + A  +F 
Sbjct: 246 VTYGTYIKGLCKVGL-FGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFK 304

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EM + GI  D+++Y+ L+D  C+  ++D A E+  EM    I PN+ +YS +IDG+ K G
Sbjct: 305 EMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEG 364

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           R+D AL +F EMK  GI  D  SY+ ++  + + G  + A+   +EM S+     A  Y 
Sbjct: 365 RVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYC 424

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           +L+ GY K  ++    + F  M+   + P+ +  + ++ +Y +   + +A+ +  +F++ 
Sbjct: 425 SLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQEN 484

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           G+  +   Y+  I  +C+  + E A+ LL  M K  + P+VV Y+++I  F +   +E  
Sbjct: 485 GVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKA 544

Query: 564 V------DDVERDLGKQKESANLDAMCSQDDKDV--------QEAGRTDNQIIKVFGQLV 609
           V        V      +  +  ++   S    DV        +E+    +QI   +  LV
Sbjct: 545 VMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQI--AYTSLV 602

Query: 610 AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
           A     G+   R R        +F +M +    PNVVT++  +N   + N    A  L E
Sbjct: 603 AGFCNTGEM-TRAR-------ALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYE 654

Query: 670 ELRLFDNQVY--GVAHGLLMGYRDNI--WVQALSLFDEVK 705
           +++  +  VY   + + +L+    N     +A +LFDE+K
Sbjct: 655 KMK--ERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMK 692



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 229/481 (47%), Gaps = 70/481 (14%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIF 287
           + F+A+I    + G   EA  VF  MK   + P++ +Y+ +ID  C KG VD     E+F
Sbjct: 281 HCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVD--QASEVF 338

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            +M  +G+ P+  +++ L+    + G  + A  +F EM + GI  D+++Y+ L+D  C+ 
Sbjct: 339 KEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRK 398

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             MD A +   EM + N SP+   Y ++I GY K+ +  +AL  F  M+ LG+  D ++ 
Sbjct: 399 GDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIAC 458

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N +LSIY +   F +AL + ++ + +G+  +  +YN  +    +    ++  ++   M  
Sbjct: 459 NHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLK 518

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL------------------KADV 509
             V P+++ YSTLI  ++K    ++A+ +F +  + G+                  K DV
Sbjct: 519 RNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDV 578

Query: 510 -----------------VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
                            + Y++L+   C  G +  A +L DEM++EG  PNVVTY   I+
Sbjct: 579 AYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFIN 638

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
            + +              L K  ++  L        + ++E G   +QI+  +  L+A  
Sbjct: 639 EYLK--------------LNKNNQAHKL-------YEKMKERGVYPDQIL--YTMLIAAF 675

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKL-KIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              G+     R E L     F +M +  +  PNVV ++ ++N+  + N  + A  L EE+
Sbjct: 676 CNTGEMN---RAEAL-----FDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEM 727

Query: 672 R 672
           R
Sbjct: 728 R 728



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 143/578 (24%), Positives = 257/578 (44%), Gaps = 67/578 (11%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN-----LVTYNAVIDACGKGG 277
           G+ N++ +FS +I  Y  +G   E   +   +  +  + N     LV+   ++D   K  
Sbjct: 80  GFENSINSFSIIIHTYALAGMSWEVFILIRDIVTFYKEENRDAGELVS--LLLDV-EKSN 136

Query: 278 VDFKHVVEIF--DDMLR-----------NGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           V F  ++++F  + ML            +G++ + ++ N LL         +  R LF  
Sbjct: 137 VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEV 196

Query: 325 MVHRGIDQDIFTYNTLLDAICK--GAQMDL--AFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           ++  G   +I TY  +++  C+  G  +D+  A EI+ ++     +PNVVTY T I G  
Sbjct: 197 LIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLC 256

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K G    A  +   +      L+   +N V+    + G  +EA  V KEM++SGI  D  
Sbjct: 257 KVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVY 316

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           +Y+ L+ G+ ++G+ D+   +F++M+   + PN+ +YS LID + K G   +A+++F E 
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEM 376

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           K +G+  DV  YS LID  C+ G ++SA+   +EMT     P+   Y S+I  + +S   
Sbjct: 377 KNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQF 436

Query: 561 ECTVDD--VERDLGKQKESAN----LDAMCSQDD--------KDVQEAG-----RTDNQI 601
              + +  + + LG   ++      L   C + D        +  QE G      + N+ 
Sbjct: 437 ANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEF 496

Query: 602 I-KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           I ++    V EKA                L +   M K  + P+VV +S +++  ++  +
Sbjct: 497 IHRICRGSVPEKA----------------LQLLPVMLKRNVLPDVVNYSTLISCFAKRLN 540

Query: 661 FEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFY 716
            E A ML  ++      F+ + Y +   L +   D     A  LF  +K          Y
Sbjct: 541 SEKAVMLFIKMTKVGITFNVKTYTILINLFIS--DCKMDVAYRLFKGMKESRVYPDQIAY 598

Query: 717 NALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
            +L     + G+   A+ +  E  R     NV + +C 
Sbjct: 599 TSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCF 636


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 192/391 (49%), Gaps = 40/391 (10%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +D A   +   L+ G    V  +S++I+A  ++    +A+ V  SM +  + PN  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N+++   C  G    K  +     M  +GV+PD +T+NSL+    + G    AR +F+ M
Sbjct: 273 NSIVHGYCSSG--QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 326 VHRGIDQDIFTYNTLLDAIC-KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
             RG+  +I TY TLL     KGA +++   ++  M    I PN   +S +I  YAK G+
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL------------------- 425
           +D A+ +FS+M+  G+  D V+Y TV+ I  K GR E+A+                    
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 426 ----------------VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
                           +  EM   GI  D + +N+++  + K+G+  E  ++F+ M    
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           V P+++TYSTLID Y   G   EA ++       G+K D V Y+ LI+  CK   +E A+
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            L  EM   G+ P+++TYN I+    ++  T
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRT 600



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/513 (25%), Positives = 247/513 (48%), Gaps = 44/513 (8%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V +++ +I+ + + G   +A   ++ M    + PN+VTY+++I A C    +D    +E+
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD--KAMEV 256

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
              M++NGV P+  T+NS++   CS G   EA      +M   G++ D+ TYN+L+D +C
Sbjct: 257 LTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAI-GFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  +   A ++   M  + + P + TY T++ GYA  G L +   +   M   GI  +  
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            ++ ++  YAK G+ ++A+LV  +M   G+  D VTY  ++G   K G+ ++  R FEQM
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             + +SP  + Y++LI        + +A ++  E    G+  D + ++++ID+ CK G V
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
             +  L D M + G++P+++TY+++ID +  +              GK  E+  L  + S
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLA--------------GKMDEATKL--LAS 539

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
                ++    T N +I  + ++              R E   +L  F++M    + P++
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKI-------------SRMEDALVL--FREMESSGVSPDI 584

Query: 646 VTFSAILNACSRCNSFEDASMLL----EELRLFDNQVYGVA-HGLLMGYRDNIWVQALSL 700
           +T++ IL    +      A  L     E     +   Y +  HGL    ++N+  +AL +
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC---KNNLTDEALRM 641

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           F  + L D    +  +N +   L   G+   A+
Sbjct: 642 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 176/320 (55%), Gaps = 1/320 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y FS LI AY + G   +A+ VF+ M++  L P+ VTY  VI    K G   +  +  F+
Sbjct: 375 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG-RVEDAMRYFE 433

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M+   + P  I +NSL+        W+ A+ L  EM+ RGI  D   +N+++D+ CK  
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++  + ++   M    + P+++TYST+IDGY  AG++D+A  + + M  +G+  D V+YN
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+++ Y K+ R E+AL++ +EMESSG+  D +TYN +L G  +  +    + ++  +   
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
                L TY+ ++    K  L  EA+++F+      L+ +   ++ +I AL K G  + A
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 529 VSLLDEMTKEGIRPNVVTYN 548
             L   ++  G+ P+V TY+
Sbjct: 674 KDLFAALSANGLVPDVRTYS 693



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 122/485 (25%), Positives = 233/485 (48%), Gaps = 34/485 (7%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKRYNLKPNLVT 265
           G++DL        + +G+     AF+ ++          +A+  V   M +    PN+ +
Sbjct: 105 GRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 266 YNAVIDACGKGGVD---FKHVVEIFDDMLRNG--VQPDRITFNSLLAVCSRGGLWEAARN 320
           YN ++    KG  D    +  +E+   M  +G    PD +++ +++    + G  + A  
Sbjct: 165 YNILL----KGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
            ++EM+ RGI  ++ TY++++ A+CK   MD A E++  M    + PN  TY++++ GY 
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
            +G+  +A+    +M   G+  D V+YN+++    K GR  EA  +   M   G++ +  
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY  LL GY  +G   E+  + + M  + + PN   +S LI  Y+K G   +AM +F + 
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGR- 556
           +Q GL  D V Y  +I  LCK+G VE A+   ++M  E + P  + YNS+I +   F + 
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 557 SATTECTVDDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIKV--------FG 606
               E  ++ ++R +       N  +D+ C +    V E+ +  + ++++        + 
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKE--GRVIESEKLFDLMVRIGVKPDIITYS 518

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            L+      GK +   +        +   M  + +KP+ VT++ ++N   + +  EDA +
Sbjct: 519 TLIDGYCLAGKMDEATK--------LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570

Query: 667 LLEEL 671
           L  E+
Sbjct: 571 LFREM 575



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 182/342 (53%), Gaps = 3/342 (0%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD 279
           ++G    V  +++L+    ++G C EA  +F+SM +  LKP + TY  ++     KG + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
             H   + D M+RNG+ P+   F+ L+   ++ G  + A  +F++M  +G++ D  TY T
Sbjct: 357 EMH--GLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++  +CK  +++ A     +M  + +SP  + Y+++I       + D A  +  EM   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I LD + +N+++  + K GR  E+  +   M   G++ D +TY+ L+ GY   GK DE  
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++   M +  + P+ +TY+TLI+ Y K    ++A+ +FRE + +G+  D++ Y+ ++  L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +     +A  L   +T+ G +  + TYN I+    ++  T+
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 183/358 (51%), Gaps = 1/358 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++  L + G+   A+ +F++    G    +  +  L+  Y   G   E   + + M R
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN   ++ +I A  K G      + +F  M + G+ PD +T+ +++ +  + G  E
Sbjct: 368 NGIHPNHYVFSILICAYAKQG-KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A   F +M+   +      YN+L+ ++C   + D A E++ EM  + I  + + ++++I
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D + K GR+ ++  +F  M  +G+  D ++Y+T++  Y   G+ +EA  +   M S G++
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTYN L+ GY K  + ++   +F +M++  VSP+++TY+ ++    +      A ++
Sbjct: 547 PDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +    ++G + ++  Y+ ++  LCKN L + A+ +   +    ++    T+N +I A 
Sbjct: 607 YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 664



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 206/489 (42%), Gaps = 84/489 (17%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ---DIF 335
           D +HV   FD++LR G        N  LA  +R     AA + +N M   G D+   ++ 
Sbjct: 37  DARHV---FDELLRRGRGASIYGLNCALADVARHS-PAAAVSRYNRMARAGADEVTPNLC 92

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM-FSE 394
           TY  L+ + C   ++DL F  +  +  K    + + ++ M+ G     R  DA+++    
Sbjct: 93  TYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRR 152

Query: 395 MKFLGI------------GL-------------------------DRVSYNTVLSIYAKL 417
           M  LG             GL                         D VSY TV++ + K 
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G  ++A     EM   GI  + VTY++++    K    D+   +   M  + V PN  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           ++++  Y   G  KEA+   ++    G++ DVV Y++L+D LCKNG    A  + D MTK
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
            G++P + TY +++  +   AT    V+              LD M           G  
Sbjct: 333 RGLKPEITTYGTLLQGY---ATKGALVE----------MHGLLDLMVRN--------GIH 371

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
            N    VF  L+   A QGK +    Q +L    VF KM +  + P+ VT+  ++    +
Sbjct: 372 PNHY--VFSILICAYAKQGKVD----QAML----VFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 658 CNSFEDASMLLEEL---RLF-DNQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTA 712
               EDA    E++   RL   N VY  + H L +  +   W +A  L  E+        
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK---WDKAKELILEMLDRGICLD 478

Query: 713 SAFYNALTD 721
           + F+N++ D
Sbjct: 479 TIFFNSIID 487



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 192/379 (50%), Gaps = 13/379 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           ++ L+     +G+  +A+    F+  R++  N        +I IL + G+V+ A   FE 
Sbjct: 377 FSILICAYAKQGKVDQAM--LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQ 434

Query: 219 ALNEGY--GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
            ++E    GN VY  ++LI +        +A  +   M    +  + + +N++ID+  K 
Sbjct: 435 MIDERLSPGNIVY--NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492

Query: 277 GVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G     V+E   +FD M+R GV+PD IT+++L+      G  + A  L   MV  G+  D
Sbjct: 493 G----RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             TYNTL++  CK ++M+ A  +  EM +  +SP+++TY+ ++ G  +  R   A  ++ 
Sbjct: 549 CVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            +   G  L+  +YN +L    K    +EAL + + +  + ++ +  T+N ++G   K G
Sbjct: 609 GITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVG 668

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           + DE + +F  + A+ + P++ TYS + +   + GL +E   +F   ++ G  A+  + +
Sbjct: 669 RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728

Query: 514 ALIDALCKNGLVESAVSLL 532
           +++  L + G +  A + L
Sbjct: 729 SIVRKLLQRGDITRAGTYL 747



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 142/342 (41%), Gaps = 69/342 (20%)

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA--FEIMAEMPAKNISPNVVTYS 373
           E AR++F+E++ RG    I+  N  L  + + +       +  MA   A  ++PN+ TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            ++     AGRLD        +   G  +D +++  +L                      
Sbjct: 96  ILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLK--------------------- 134

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G+  D  T +A+          D V R   Q+   C+ PN+ +Y+ L+         +EA
Sbjct: 135 GLCADKRTSDAM----------DIVLRRMTQLG--CI-PNVFSYNILLKGLCDDNRSQEA 181

Query: 494 MQIFREFKQAG--LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +++ +     G     DVV Y+ +I+   K G ++ A     EM   GI PNVVTY+SII
Sbjct: 182 LELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSII 241

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
            A  ++                Q     ++ + S     V    RT N I+  +      
Sbjct: 242 AALCKA----------------QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS---- 281

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
            +GQ K+           +G  +KMH   ++P+VVT++++++
Sbjct: 282 -SGQPKEA----------IGFLKKMHSDGVEPDVVTYNSLMD 312


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 163/641 (25%), Positives = 276/641 (43%), Gaps = 122/641 (19%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+ L R G VD A  +  +  N+G     Y ++ LI  + R     E  S+ + M  
Sbjct: 271 SVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYT 330

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             LKP+ V Y A+I+   K   D     ++ ++M    ++ +  T+ +L+    + G  E
Sbjct: 331 MGLKPDHVAYTALINGFVKQS-DIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLE 389

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS---------- 366
            A +LF+EM   GI  DI TYN L++   K   M+ A+E++ E+  +N++          
Sbjct: 390 KAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIV 449

Query: 367 -------------------------PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
                                    PN+V Y+T++ G  K GR ++A+ +   MK  G+ 
Sbjct: 450 NGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLS 509

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D   YNTV+  + K G+ EE      EM + G++ +  TY A + GY + G+     R 
Sbjct: 510 PDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERS 569

Query: 462 FEQMKADCVSPNLLTYSTLIDVY-----------------------------------SK 486
           F +M    ++PN +  + LID Y                                   SK
Sbjct: 570 FIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSK 629

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G  +EAM +F E    GL  DV  Y++LI  LCK G +++A  L D+M K+GI PN+VT
Sbjct: 630 NGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVT 689

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG 606
           YN++I+   +             ++ K +E  +           + E G   N +   + 
Sbjct: 690 YNALINGLCKLG-----------EIAKARELFD----------GIPEKGLARNSV--TYS 726

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK---IKPNVVTFSAILNACSRCNSFED 663
            ++   AG  K  N        +   FQ  H +K   + P+   + A+++ C +  + E 
Sbjct: 727 TII---AGYCKSAN--------LTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEK 775

Query: 664 ASMLLEELRLFDNQV-YGVA-----HGLLMG-YRDNIWVQALSLFDEVKLMDSSTASAFY 716
           A      L LF   V  G+A     + L+ G ++    ++A  L +++     +     Y
Sbjct: 776 A------LSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTY 829

Query: 717 NALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLH 757
             L +     G  + A+ + +E ++R V  NV + + L LH
Sbjct: 830 TILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSL-LH 869



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 147/537 (27%), Positives = 239/537 (44%), Gaps = 46/537 (8%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           VY ++ LI+AY R G  +E   V   M+     PNLVTY+ VI    + G D    +E+ 
Sbjct: 232 VYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAG-DVDEALELK 290

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
             M   G+ PD   + +L+    R       +++ +EM   G+  D   Y  L++   K 
Sbjct: 291 RSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQ 350

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
           + +  AF++  EM A+ I  N  TY  +I G  K G L+ A ++FSEM  +GI  D  +Y
Sbjct: 351 SDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTY 410

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N ++  Y K+   E+A  +  E++   +  +A    A++ G    G       +F++M +
Sbjct: 411 NCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMIS 470

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + PN++ Y+T++    K G ++EA++I    K  GL  DV  Y+ +I   CK G +E 
Sbjct: 471 WGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEE 530

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE--------------------CT--VD 565
             S L EM  +G++PNV TY + I  + R+   +                    CT  +D
Sbjct: 531 GKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLID 590

Query: 566 DVERDLGKQKESANLDAMCSQDD-KDVQE-----AGRTDN----QIIKVFGQLVAEK--- 612
              +D    K  A    M  Q    DVQ       G + N    + + VF +L+ +    
Sbjct: 591 GYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVP 650

Query: 613 ---AGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
                     N C++ ++     +   M K  I PN+VT++A++N   +      A  L 
Sbjct: 651 DVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELF 710

Query: 669 E---ELRLFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
           +   E  L  N V      ++ GY +     +A  LF  +KL+     S  Y AL D
Sbjct: 711 DGIPEKGLARNSV--TYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALID 765



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 151/588 (25%), Positives = 270/588 (45%), Gaps = 46/588 (7%)

Query: 180 AFAVKREERKNDQGKLAS----AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALI 235
           AF VK EE    + KL +    A+I  L ++G ++ A+++F      G    +  ++ LI
Sbjct: 356 AFQVK-EEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLI 414

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV 295
             Y +    ++A  +   +K+ NL  N     A+++     G D     E+F +M+  G+
Sbjct: 415 EGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCG-DLTRANELFQEMISWGL 473

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +P+ + + +++    + G +E A  +   M  +G+  D+F YNT++   CK  +M+    
Sbjct: 474 KPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKS 533

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
            + EM AK + PNV TY   I GY +AG +  A   F EM   GI  + V    ++  Y 
Sbjct: 534 YLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYC 593

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K G   +A    + M   G+  D  T++ L+ G  K GK  E   +F ++    + P++ 
Sbjct: 594 KDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVF 653

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY++LI    K G  K A ++  +  + G+  ++V Y+ALI+ LCK G +  A  L D +
Sbjct: 654 TYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGI 713

Query: 536 TKEGIRPNVVTYNSIIDAFGRSA--TTECTVDDVERDLGKQKES----ANLDAMCSQDDK 589
            ++G+  N VTY++II  + +SA  T    +    + +G   +S    A +D  C   + 
Sbjct: 714 PEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNT 773

Query: 590 D---------VQEAGRTD---NQIIKVFG---------QLVAEKAGQGKKENRCRQEIL- 627
           +         V+E   +    N +I  F          QLV +        N     IL 
Sbjct: 774 EKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILI 833

Query: 628 ---CILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQ 677
              C +G       +F +M K  + PNV+T++++L+  +R     +   L +E+     +
Sbjct: 834 EYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIK 893

Query: 678 VYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
              +A  +++    ++  W++AL L D++     +     Y  L D L
Sbjct: 894 PDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDAL 941



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 201/377 (53%), Gaps = 9/377 (2%)

Query: 191 DQGKLA-----SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           DQG L      S +I  L + GK+  A  +F   L++G    V+ +++LIS   + G  +
Sbjct: 610 DQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLK 669

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
            A  + + M +  + PN+VTYNA+I+   K G +     E+FD +   G+  + +T++++
Sbjct: 670 AAFELHDDMCKKGINPNIVTYNALINGLCKLG-EIAKARELFDGIPEKGLARNSVTYSTI 728

Query: 306 LA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           +A  C    L EA + LF+ M   G+  D F Y  L+D  CK    + A  +   M  + 
Sbjct: 729 IAGYCKSANLTEAFQ-LFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG 787

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           I+ +   ++ +IDG+ K G+L +A  +  +M    I  + V+Y  ++  +  +G  +EA 
Sbjct: 788 IA-STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAE 846

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +  EM+   +  + +TY +LL GY + G+  E+  +F++M A  + P+ L +S ++D +
Sbjct: 847 QLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAH 906

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            K G + +A+++  +    G+     LY+ LIDALCK+  +   + +LDE+ K+G + ++
Sbjct: 907 LKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSL 966

Query: 545 VTYNSIIDAFGRSATTE 561
            T  +++  F R+  T+
Sbjct: 967 ATCGTLVCCFHRAGRTD 983



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 164/334 (49%), Gaps = 8/334 (2%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           F  LI  Y + G+  EA+SVF   K       L   N++     KG     + VE+F  +
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKG-----NRVELFWKV 220

Query: 291 LRN---GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            +     + PD  T+ +L+    R G  E  +++  +M  +G   ++ TY+ ++  +C+ 
Sbjct: 221 YKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRA 280

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             +D A E+   M  K + P+   Y+T+IDG+ +  R  +  +M  EM  +G+  D V+Y
Sbjct: 281 GDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAY 340

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
             +++ + K      A  V +EM +  I+ +  TY AL+ G  K G  ++   +F +M  
Sbjct: 341 TALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTM 400

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + P++ TY+ LI+ Y K    ++A ++  E K+  L A+  +  A+++ LC  G +  
Sbjct: 401 MGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTR 460

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           A  L  EM   G++PN+V Y +I+    +    E
Sbjct: 461 ANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFE 494



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 175/411 (42%), Gaps = 62/411 (15%)

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN---TLLDAICKGAQMDLAFEIM 357
           TF+ L  +    GL+  A N+   M+         T N    +LD+I K  +        
Sbjct: 109 TFSILSLILCNSGLFGNAANVLERMID--------TRNPHVKILDSIIKCYK-------- 152

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
            E+   + S +VV +  +ID Y K G L++A+++F   K     +     N++     K 
Sbjct: 153 -EINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKG 211

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
            R E    V K M  + I  D  TY  L+  Y + GK +E + +   M+     PNL+TY
Sbjct: 212 NRVELFWKVYKGMLGA-IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTY 270

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           S +I    + G   EA+++ R     GL  D  +Y+ LID  C+        S+LDEM  
Sbjct: 271 SVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYT 330

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKD 590
            G++P+ V Y ++I+ F + +        V+ ++  +K   N       +  +C   D +
Sbjct: 331 MGLKPDHVAYTALINGFVKQSDIGGAF-QVKEEMFARKIKLNTFTYYALIHGLCKIGDLE 389

Query: 591 VQEAGRTDNQI------IKVFGQLV--------AEKAG----QGKKENRCRQEILC---I 629
             E   ++  +      I+ +  L+         EKA     + KKEN      +C   +
Sbjct: 390 KAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIV 449

Query: 630 LG------------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
            G            +FQ+M    +KPN+V ++ I+    +   FE+A  +L
Sbjct: 450 NGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKIL 500



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/370 (19%), Positives = 141/370 (38%), Gaps = 75/370 (20%)

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD  +  + E+         V +  ++ IY K G   EA+ V    +++         N+
Sbjct: 144 LDSIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNS 203

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L     K  + +   ++++ M    V P++ TY+ LI+ Y + G  +E   +  + ++ G
Sbjct: 204 LSKDLLKGNRVELFWKVYKGMLGAIV-PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKG 262

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
              ++V YS +I  LC+ G V+ A+ L   M  +G+ P+   Y ++I             
Sbjct: 263 CIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLI------------- 309

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                           D  C Q                        +++ +GK       
Sbjct: 310 ----------------DGFCRQ------------------------KRSTEGK------- 322

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL-----RLFDNQVY 679
                  +  +M+ + +KP+ V ++A++N   + +    A  + EE+     +L     Y
Sbjct: 323 ------SMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYY 376

Query: 680 GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEG 739
            + HGL    +     +A  LF E+ +M        YN L +  +       A  +++E 
Sbjct: 377 ALIHGLC---KIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEI 433

Query: 740 KRRQVWENVW 749
           K+  +  N +
Sbjct: 434 KKENLTANAY 443


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 192/391 (49%), Gaps = 40/391 (10%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +D A   +   L+ G    V  +S++I+A  ++    +A+ V  SM +  + PN  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N+++   C  G    K  +     M  +GV+PD +T+NSL+    + G    AR +F+ M
Sbjct: 273 NSIVHGYCSSG--QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 326 VHRGIDQDIFTYNTLLDAIC-KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
             RG+  +I TY TLL     KGA +++   ++  M    I PN   +S +I  YAK G+
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL------------------- 425
           +D A+ +FS+M+  G+  D V+Y TV+ I  K GR E+A+                    
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 426 ----------------VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
                           +  EM   GI  D + +N+++  + K+G+  E  ++F+ M    
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           V P+++TYSTLID Y   G   EA ++       G+K D V Y+ LI+  CK   +E A+
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            L  EM   G+ P+++TYN I+    ++  T
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRT 600



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/513 (25%), Positives = 247/513 (48%), Gaps = 44/513 (8%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V +++ +I+ + + G   +A   ++ M    + PN+VTY+++I A C    +D    +E+
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD--KAMEV 256

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
              M++NGV P+  T+NS++   CS G   EA      +M   G++ D+ TYN+L+D +C
Sbjct: 257 LTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAI-GFLKKMHSDGVEPDVVTYNSLMDYLC 315

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  +   A ++   M  + + P + TY T++ GYA  G L +   +   M   GI  +  
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            ++ ++  YAK G+ ++A+LV  +M   G+  D VTY  ++G   K G+ ++  R FEQM
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             + +SP  + Y++LI        + +A ++  E    G+  D + ++++ID+ CK G V
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
             +  L D M + G++P+++TY+++ID +  +              GK  E+  L  + S
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLA--------------GKMDEATKL--LAS 539

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
                ++    T N +I  + ++              R E   +L  F++M    + P++
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKI-------------SRMEDALVL--FREMESSGVSPDI 584

Query: 646 VTFSAILNACSRCNSFEDASMLL----EELRLFDNQVYGVA-HGLLMGYRDNIWVQALSL 700
           +T++ IL    +      A  L     E     +   Y +  HGL    ++N+  +AL +
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC---KNNLTDEALRM 641

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           F  + L D    +  +N +   L   G+   A+
Sbjct: 642 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 176/320 (55%), Gaps = 1/320 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y FS LI AY + G   +A+ VF+ M++  L P+ VTY  VI    K G   +  +  F+
Sbjct: 375 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG-RVEDAMRYFE 433

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M+   + P  I +NSL+        W+ A+ L  EM+ RGI  D   +N+++D+ CK  
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++  + ++   M    + P+++TYST+IDGY  AG++D+A  + + M  +G+  D V+YN
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+++ Y K+ R E+AL++ +EMESSG+  D +TYN +L G  +  +    + ++  +   
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
                L TY+ ++    K  L  EA+++F+      L+ +   ++ +I AL K G  + A
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 529 VSLLDEMTKEGIRPNVVTYN 548
             L   ++  G+ P+V TY+
Sbjct: 674 KDLFAALSANGLVPDVRTYS 693



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 233/485 (48%), Gaps = 34/485 (7%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKRYNLKPNLVT 265
           G++DL        + +G+     AF+ L+          +A+  V   M +    PN+ +
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 266 YNAVIDACGKGGVD---FKHVVEIFDDMLRNG--VQPDRITFNSLLAVCSRGGLWEAARN 320
           YN ++    KG  D    +  +E+   M  +G    PD +++ +++    + G  + A  
Sbjct: 165 YNILL----KGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
            ++EM+ RGI  ++ TY++++ A+CK   MD A E++  M    + PN  TY++++ GY 
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
            +G+  +A+    +M   G+  D V+YN+++    K GR  EA  +   M   G++ +  
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY  LL GY  +G   E+  + + M  + + PN   +S LI  Y+K G   +AM +F + 
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGR- 556
           +Q GL  D V Y  +I  LCK+G VE A+   ++M  E + P  + YNS+I +   F + 
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 557 SATTECTVDDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIKV--------FG 606
               E  ++ ++R +       N  +D+ C +    V E+ +  + ++++        + 
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEG--RVIESEKLFDLMVRIGVKPDIITYS 518

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            L+      GK +   +        +   M  + +KP+ VT++ ++N   + +  EDA +
Sbjct: 519 TLIDGYCLAGKMDEATK--------LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570

Query: 667 LLEEL 671
           L  E+
Sbjct: 571 LFREM 575



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 182/342 (53%), Gaps = 3/342 (0%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD 279
           ++G    V  +++L+    ++G C EA  +F+SM +  LKP + TY  ++     KG + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
             H   + D M+RNG+ P+   F+ L+   ++ G  + A  +F++M  +G++ D  TY T
Sbjct: 357 EMH--GLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++  +CK  +++ A     +M  + +SP  + Y+++I       + D A  +  EM   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I LD + +N+++  + K GR  E+  +   M   G++ D +TY+ L+ GY   GK DE  
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++   M +  + P+ +TY+TLI+ Y K    ++A+ +FRE + +G+  D++ Y+ ++  L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +     +A  L   +T+ G +  + TYN I+    ++  T+
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 183/358 (51%), Gaps = 1/358 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++  L + G+   A+ +F++    G    +  +  L+  Y   G   E   + + M R
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN   ++ +I A  K G      + +F  M + G+ PD +T+ +++ +  + G  E
Sbjct: 368 NGIHPNHYVFSILICAYAKQG-KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A   F +M+   +      YN+L+ ++C   + D A E++ EM  + I  + + ++++I
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D + K GR+ ++  +F  M  +G+  D ++Y+T++  Y   G+ +EA  +   M S G++
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTYN L+ GY K  + ++   +F +M++  VSP+++TY+ ++    +      A ++
Sbjct: 547 PDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +    ++G + ++  Y+ ++  LCKN L + A+ +   +    ++    T+N +I A 
Sbjct: 607 YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 664



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 204/489 (41%), Gaps = 84/489 (17%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ---DIF 335
           D +HV   FD++LR G        N  LA  +R     AA + +N M   G D+   ++ 
Sbjct: 37  DARHV---FDELLRRGRGASIYGLNCALADVARHS-PAAAVSRYNRMARAGADEVTPNLC 92

Query: 336 TYNTLLDAICKGAQMDLAFE------------------------------------IMAE 359
           TY  L+ + C   ++DL F                                     ++  
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG--IGLDRVSYNTVLSIYAKL 417
           M      PNV +Y+ ++ G     R  +AL +   M   G     D VSY TV++ + K 
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G  ++A     EM   GI  + VTY++++    K    D+   +   M  + V PN  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           ++++  Y   G  KEA+   ++    G++ DVV Y++L+D LCKNG    A  + D MTK
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
            G++P + TY +++  +   AT    V+              LD M           G  
Sbjct: 333 RGLKPEITTYGTLLQGY---ATKGALVE----------MHGLLDLMVRN--------GIH 371

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
            N    VF  L+   A QGK +    Q +L    VF KM +  + P+ VT+  ++    +
Sbjct: 372 PNHY--VFSILICAYAKQGKVD----QAML----VFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 658 CNSFEDASMLLEEL---RLF-DNQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTA 712
               EDA    E++   RL   N VY  + H L +  +   W +A  L  E+        
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK---WDKAKELILEMLDRGICLD 478

Query: 713 SAFYNALTD 721
           + F+N++ D
Sbjct: 479 TIFFNSIID 487



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 192/379 (50%), Gaps = 13/379 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           ++ L+     +G+  +A+    F+  R++  N        +I IL + G+V+ A   FE 
Sbjct: 377 FSILICAYAKQGKVDQAM--LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQ 434

Query: 219 ALNEGY--GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
            ++E    GN VY  ++LI +        +A  +   M    +  + + +N++ID+  K 
Sbjct: 435 MIDERLSPGNIVY--NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492

Query: 277 GVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G     V+E   +FD M+R GV+PD IT+++L+      G  + A  L   MV  G+  D
Sbjct: 493 G----RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             TYNTL++  CK ++M+ A  +  EM +  +SP+++TY+ ++ G  +  R   A  ++ 
Sbjct: 549 CVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            +   G  L+  +YN +L    K    +EAL + + +  + ++ +  T+N ++G   K G
Sbjct: 609 GITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVG 668

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           + DE + +F  + A+ + P++ TYS + +   + GL +E   +F   ++ G  A+  + +
Sbjct: 669 RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728

Query: 514 ALIDALCKNGLVESAVSLL 532
           +++  L + G +  A + L
Sbjct: 729 SIVRKLLQRGDITRAGTYL 747



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 145/346 (41%), Gaps = 77/346 (22%)

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA--FEIMAEMPAKNISPNVVTYS 373
           E AR++F+E++ RG    I+  N  L  + + +       +  MA   A  ++PN+ TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I     AGRLD           LG              +A LG       V K+    
Sbjct: 96  ILIGSCCCAGRLD-----------LG--------------FAALGN------VIKK---- 120

Query: 434 GIRKDAVTYNALLGGYGKQGK----YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           G R DA+ +  LL G     +     D V R   Q+   C+ PN+ +Y+ L+        
Sbjct: 121 GFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQL--GCI-PNVFSYNILLKGLCDENR 177

Query: 490 YKEAMQIFREFKQAG--LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
            +EA+++ +     G     DVV Y+ +I+   K G ++ A     EM   GI PNVVTY
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTY 237

Query: 548 NSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
           +SII A  ++                Q     ++ + S     V    RT N I+  +  
Sbjct: 238 SSIIAALCKA----------------QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
                +GQ K+           +G  +KMH   ++P+VVT++++++
Sbjct: 282 -----SGQPKEA----------IGFLKKMHSDGVEPDVVTYNSLMD 312


>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
 gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
          Length = 651

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 251/513 (48%), Gaps = 49/513 (9%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+       +   A+ C    + +  + N+   +  ++IS     G  + A++ FE 
Sbjct: 169 YTSLIHAYAEARDMEGAVACTEEMLSQGIQLNE--AVFCSIISGYASAGNNEAAEHWFEK 226

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK--- 275
              E        +++++ AY ++G  +   ++   M+    + NL  Y  V++   +   
Sbjct: 227 FKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRD 286

Query: 276 --GGVDFKH-------------VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
               + F H              ++I ++M ++GV P+++ +  ++   +RGG + AA  
Sbjct: 287 EEKCLSFFHRLKVSPQAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFK 346

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           ++ +MV  G+  DI  YN L+ A CK  +MD A  ++  + A  + P + TY++++DGY 
Sbjct: 347 VWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYV 406

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K G +  AL +F  +K  G+    VSYN++LS  AK  + E A L+  EM ++G+     
Sbjct: 407 KGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSER 466

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
            Y AL  GY + G  ++   +F++MK + ++ +++ Y  L+      G    A ++F++ 
Sbjct: 467 IYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQI 526

Query: 501 KQAGLKADVVLYSALID-ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             AGLK + + Y  ++D A  + G VE A  L+  M ++G +P+ + YNS+I+A+G S  
Sbjct: 527 TDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGR 586

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
            E    D+E  L K  +S++      Q   D+     T N +I+V+ Q     AG   + 
Sbjct: 587 HE----DMEALLAKMVKSSS-----KQTKPDIG----TYNTLIQVYAQ-----AGFIPRA 628

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
                       +FQ + +LK+ P+  T++A++
Sbjct: 629 EE----------LFQGLARLKLVPDATTWTALM 651



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/481 (25%), Positives = 232/481 (48%), Gaps = 57/481 (11%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +  L+  Y R G    A + F +M+  ++KPN+  Y ++I A  +   D +  V   ++M
Sbjct: 134 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAE-ARDMEGAVACTEEM 192

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           L  G+Q +   F S+++  +  G  EAA + F +     +      YN+++ A C+   M
Sbjct: 193 LSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNM 252

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYA-------------------KAGRLDDALNM 391
           +    ++A+M  +    N+  Y+T+++G+A                   +AG +  AL++
Sbjct: 253 ETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALDI 312

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
             EM   G+  +++ Y  ++  YA+ G F  A  V ++M S+G++ D V YN L+  + K
Sbjct: 313 LEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCK 372

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G+ D+   + E ++A+ + P + TY++++D Y KGG  ++A+++F   K AGL+  VV 
Sbjct: 373 AGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVS 432

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           Y++L+  L K   +E+A  +L+EM   G+ P+   Y ++ + + R+        DVE+  
Sbjct: 433 YNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTG-------DVEKAF 485

Query: 572 G----KQKESANLD---------AMCSQDD--------KDVQEAGRTDNQIIKVFGQLVA 610
           G     +KE+  +D         A C+           + + +AG   NQI      L  
Sbjct: 486 GVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYC-TMLDG 544

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
             A  G+ E    +E++        M +   KP+ + +++++NA       ED   LL +
Sbjct: 545 AYARAGRVEE--AEELV------SAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAK 596

Query: 671 L 671
           +
Sbjct: 597 M 597



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/341 (21%), Positives = 147/341 (43%), Gaps = 49/341 (14%)

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P +  Y  ++D YA+ G    A   F  M+   I  +   Y +++  YA+    E A+  
Sbjct: 129 PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVAC 188

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            +EM S GI+ +   + +++ GY   G  +     FE+ KA+ + P  + Y++++  Y +
Sbjct: 189 TEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQ 248

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALC-------------------KNGLVES 527
            G  +    +  + ++ G + ++ LY+ +++                      + G +  
Sbjct: 249 AGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAK 308

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGR----SATTECTVDDVERDLGKQKESANL--D 581
           A+ +L+EM K G+ PN + Y  I+D + R    +A  +   D V   L       N+   
Sbjct: 309 ALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVH 368

Query: 582 AMCSQDDKDVQEAGRTD-----------NQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
           A C        +AGR D           N+++       +   G  K  N     I   L
Sbjct: 369 AFC--------KAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGN-----IQKAL 415

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            VF ++    ++P VV+++++L+  ++    E+A ++L E+
Sbjct: 416 EVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEM 456



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/337 (21%), Positives = 150/337 (44%), Gaps = 20/337 (5%)

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y  ++  YA+ G    A    + M +S I+ +   Y +L+  Y +    +      E+M 
Sbjct: 134 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 193

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           +  +  N   + ++I  Y+  G  + A   F +FK   L    ++Y++++ A C+ G +E
Sbjct: 194 SQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNME 253

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
           +  +LL +M +EG + N+  Y ++++ F      E  +    R L    ++ N+ A    
Sbjct: 254 TVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHR-LKVSPQAGNM-AKALD 311

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
             +++ + G + N++I     ++ +   +G        +      V++ M    +KP++V
Sbjct: 312 ILEEMDKHGVSPNKMIYA---MIMDGYARGG-------DFTAAFKVWEDMVSAGLKPDIV 361

Query: 647 TFSAILNACSRCNSFEDASMLLEEL---RLFDN-QVYGVAHGLLMGYRDNIWVQ-ALSLF 701
            ++ +++A  +    + A  +LE +   RL    + Y     +L GY     +Q AL +F
Sbjct: 362 IYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETY---TSILDGYVKGGNIQKALEVF 418

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           D +K          YN+L   L    Q   A+L++ E
Sbjct: 419 DRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNE 455


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 250/489 (51%), Gaps = 23/489 (4%)

Query: 186 EERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           +E K+      S ++  L R  K++ A     T+  +  G +V +F++++S Y + G+  
Sbjct: 193 KEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVD 252

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
            A S F ++ +  L P++ ++N +I+  C  G +     +E+  DM ++GV+PD +T+N 
Sbjct: 253 MAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI--AEALELASDMNKHGVEPDSVTYNI 310

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L       G+   A  +  +M+ +G+  D+ TY  LL   C+   +D+   ++ +M ++ 
Sbjct: 311 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 370

Query: 365 ISPN-VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
              N ++  S M+ G  K GR+D+AL++F++MK  G+  D V+Y+ V+    KLG+F+ A
Sbjct: 371 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 430

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
           L +  EM    I  ++ T+ ALL G  ++G   E R + + + +   + +++ Y+ +ID 
Sbjct: 431 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 490

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y+K G  +EA+++F+   + G+   V  +++LI   CK   +  A  +LD +   G+ P+
Sbjct: 491 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 550

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           VV+Y +++DA+     T+ ++D++ R++ K +     +   S   K +    + +N    
Sbjct: 551 VVSYTTLMDAYANCGNTK-SIDELRREM-KAEGIPPTNVTYSVIFKGLCRGWKHEN-CNH 607

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           V  + + EK  QG ++                M    I P+ +T++ I+    R      
Sbjct: 608 VLRERIFEKCKQGLRD----------------MESEGIPPDQITYNTIIQYLCRVKHLSG 651

Query: 664 ASMLLEELR 672
           A + LE ++
Sbjct: 652 AFVFLEIMK 660



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 181/363 (49%), Gaps = 16/363 (4%)

Query: 205 RLGKVDLAKNIFETALNEGYG-NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
           +LG +D+   + +  L+ G+  N++   S ++S   ++G   EA+S+FN MK   L P+L
Sbjct: 352 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 411

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
           V Y+ VI    K G  F   + ++D+M    + P+  T  +LL  +C +G L EA R+L 
Sbjct: 412 VAYSIVIHGLCKLG-KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA-RSLL 469

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           + ++  G   DI  YN ++D   K   ++ A E+   +    I+P+V T++++I GY K 
Sbjct: 470 DSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKT 529

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
             + +A  +   +K  G+    VSY T++  YA  G  +    + +EM++ GI    VTY
Sbjct: 530 QNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTY 589

Query: 443 NALLGGYGKQGKYDEV-----RRMFEQ-------MKADCVSPNLLTYSTLIDVYSKGGLY 490
           + +  G  +  K++        R+FE+       M+++ + P+ +TY+T+I    +    
Sbjct: 590 SVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL 649

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             A       K   L A    Y+ LID+LC  G +  A S +  + ++ +  +   Y ++
Sbjct: 650 SGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTL 709

Query: 551 IDA 553
           I A
Sbjct: 710 IKA 712



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 163/361 (45%), Gaps = 15/361 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L +LGK D+A  +++   ++          AL+    + G   EA S+ +S+  
Sbjct: 415 SIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 474

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
                ++V YN VID   K G   +  +E+F  ++  G+ P   TFNSL+   C    + 
Sbjct: 475 SGETLDIVLYNIVIDGYAKSGC-IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 533

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA R + + +   G+   + +Y TL+DA           E+  EM A+ I P  VTYS +
Sbjct: 534 EA-RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 592

Query: 376 IDGYAKAGRLDDALNMFSE------------MKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
             G  +  + ++  ++  E            M+  GI  D+++YNT++    ++     A
Sbjct: 593 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 652

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
            +  + M+S  +   + TYN L+      G   +       ++   VS +   Y+TLI  
Sbjct: 653 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 712

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           +   G  + A+++F +    G    +  YSA+I+ LC+  LV  +      M  +GI P+
Sbjct: 713 HCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 772

Query: 544 V 544
           +
Sbjct: 773 L 773



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 81/394 (20%), Positives = 161/394 (40%), Gaps = 67/394 (17%)

Query: 377 DGYAKAGRLDDAL-NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +G   A RL + L N F + +  G+      ++ +L + ++L   +++L + K+M+   +
Sbjct: 114 EGSGSASRLCELLSNSFRKWESTGL-----VWDMLLFLSSRLRMVDDSLYILKKMKDQNL 168

Query: 436 R----------------------------KDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
                                        K+  TY+ ++ G  +Q K ++        + 
Sbjct: 169 NVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEW 228

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + P+++++++++  Y K G    A   F    + GL   V  ++ LI+ LC  G +  
Sbjct: 229 KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 288

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGR----SATTECTVDDVERDLGKQKESANLDAM 583
           A+ L  +M K G+ P+ VTYN +   F      S   E   D +++ L     +  +  +
Sbjct: 289 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI-LL 347

Query: 584 CSQDD-----------KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
           C Q             KD+   G   N II     +++     G+ +          L +
Sbjct: 348 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC-SVMLSGLCKTGRIDEA--------LSL 398

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL---RLFDNQVYGVAHG-LLMG 688
           F +M    + P++V +S +++   +   F+ A  L +E+   R+  N      HG LL+G
Sbjct: 399 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNS---RTHGALLLG 455

Query: 689 Y-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
             +  + ++A SL D +     +     YN + D
Sbjct: 456 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 489


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 250/489 (51%), Gaps = 23/489 (4%)

Query: 186 EERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           +E K+      S ++  L R  K++ A     T+  +  G +V +F++++S Y + G+  
Sbjct: 222 KEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVD 281

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
            A S F ++ +  L P++ ++N +I+  C  G +     +E+  DM ++GV+PD +T+N 
Sbjct: 282 MAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI--AEALELASDMNKHGVEPDSVTYNI 339

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L       G+   A  +  +M+ +G+  D+ TY  LL   C+   +D+   ++ +M ++ 
Sbjct: 340 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 399

Query: 365 ISPN-VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
              N ++  S M+ G  K GR+D+AL++F++MK  G+  D V+Y+ V+    KLG+F+ A
Sbjct: 400 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 459

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
           L +  EM    I  ++ T+ ALL G  ++G   E R + + + +   + +++ Y+ +ID 
Sbjct: 460 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 519

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y+K G  +EA+++F+   + G+   V  +++LI   CK   +  A  +LD +   G+ P+
Sbjct: 520 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 579

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           VV+Y +++DA+     T+ ++D++ R++ K +     +   S   K +    + +N    
Sbjct: 580 VVSYTTLMDAYANCGNTK-SIDELRREM-KAEGIPPTNVTYSVIFKGLCRGWKHEN-CNH 636

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           V  + + EK  QG ++                M    I P+ +T++ I+    R      
Sbjct: 637 VLRERIFEKCKQGLRD----------------MESEGIPPDQITYNTIIQYLCRVKHLSG 680

Query: 664 ASMLLEELR 672
           A + LE ++
Sbjct: 681 AFVFLEIMK 689



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 181/363 (49%), Gaps = 16/363 (4%)

Query: 205 RLGKVDLAKNIFETALNEGYG-NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
           +LG +D+   + +  L+ G+  N++   S ++S   ++G   EA+S+FN MK   L P+L
Sbjct: 381 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 440

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
           V Y+ VI    K G  F   + ++D+M    + P+  T  +LL  +C +G L EA R+L 
Sbjct: 441 VAYSIVIHGLCKLG-KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA-RSLL 498

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           + ++  G   DI  YN ++D   K   ++ A E+   +    I+P+V T++++I GY K 
Sbjct: 499 DSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKT 558

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
             + +A  +   +K  G+    VSY T++  YA  G  +    + +EM++ GI    VTY
Sbjct: 559 QNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTY 618

Query: 443 NALLGGYGKQGKYDEV-----RRMFEQ-------MKADCVSPNLLTYSTLIDVYSKGGLY 490
           + +  G  +  K++        R+FE+       M+++ + P+ +TY+T+I    +    
Sbjct: 619 SVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL 678

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             A       K   L A    Y+ LID+LC  G +  A S +  + ++ +  +   Y ++
Sbjct: 679 SGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTL 738

Query: 551 IDA 553
           I A
Sbjct: 739 IKA 741



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 163/361 (45%), Gaps = 15/361 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L +LGK D+A  +++   ++          AL+    + G   EA S+ +S+  
Sbjct: 444 SIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 503

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
                ++V YN VID   K G   +  +E+F  ++  G+ P   TFNSL+   C    + 
Sbjct: 504 SGETLDIVLYNIVIDGYAKSGC-IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 562

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA R + + +   G+   + +Y TL+DA           E+  EM A+ I P  VTYS +
Sbjct: 563 EA-RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 621

Query: 376 IDGYAKAGRLDDALNMFSE------------MKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
             G  +  + ++  ++  E            M+  GI  D+++YNT++    ++     A
Sbjct: 622 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 681

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
            +  + M+S  +   + TYN L+      G   +       ++   VS +   Y+TLI  
Sbjct: 682 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 741

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           +   G  + A+++F +    G    +  YSA+I+ LC+  LV  +      M  +GI P+
Sbjct: 742 HCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801

Query: 544 V 544
           +
Sbjct: 802 L 802



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 156/357 (43%), Gaps = 40/357 (11%)

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +DD+L +  +MK   + +   SYN+VL  + +  +  +   V KE++     K+  TY+ 
Sbjct: 182 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD---VYKEIKD----KNEHTYST 234

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++ G  +Q K ++        +   + P+++++++++  Y K G    A   F    + G
Sbjct: 235 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 294

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR----SATT 560
           L   V  ++ LI+ LC  G +  A+ L  +M K G+ P+ VTYN +   F      S   
Sbjct: 295 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 354

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDD-----------KDVQEAGRTDNQIIKVFGQLV 609
           E   D +++ L     +  +  +C Q             KD+   G   N II     ++
Sbjct: 355 EVIRDMLDKGLSPDVITYTI-LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC-SVML 412

Query: 610 AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
           +     G+ +          L +F +M    + P++V +S +++   +   F+ A  L +
Sbjct: 413 SGLCKTGRIDEA--------LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 464

Query: 670 EL---RLFDNQVYGVAHG-LLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
           E+   R+  N      HG LL+G  +  + ++A SL D +     +     YN + D
Sbjct: 465 EMCDKRILPN---SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 518


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 200/393 (50%), Gaps = 3/393 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +T L++ L  +G+  +A+      V    + +  G     +I  L ++G+   A ++   
Sbjct: 130 FTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVG--YGTLIHGLCKVGETRAALDLLRR 187

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                    V  +S +I    +  +  +A  +++ M    + PN+VTY+A+I      G 
Sbjct: 188 VDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVG- 246

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K  +++F+ M+   ++PD  TFN L+    + G  +  + +F  M+ +GI  ++ TY 
Sbjct: 247 QLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYC 306

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L+D  C   +++ A  I+  M  + ++P++ +Y+ +IDG+ K  ++D+A+N+F EM   
Sbjct: 307 SLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHK 366

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            I  D V+YN+++    KLG+   AL +  EM   G+  D +TY+++L    K  + D+ 
Sbjct: 367 HIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKA 426

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +  ++K   + PN+ TY+ LID   KGG  ++A  IF +    G    V  Y+ +I  
Sbjct: 427 IALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHG 486

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            C  GL + A++LL +M      P+ VTY  II
Sbjct: 487 FCNKGLFDEALALLSKMKDNSCIPDAVTYEIII 519



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 173/299 (57%), Gaps = 5/299 (1%)

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIF-DDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           PN +T+  +I   C KG +   H   +F D+++  G Q D++ + +L+    + G   AA
Sbjct: 125 PNTITFTTLIKGLCLKGQI---HQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            +L   +    +  ++  Y+T++D +CK   ++ AF++ +EM +K ISPNVVTYS +I G
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 241

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           +   G+L DA+++F++M    I  D  ++N ++  + K G+ +E   V   M   GI+ +
Sbjct: 242 FFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPN 301

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VTY +L+ GY    + ++ + +   M    V+P++ +Y+ LID + K     EAM +F+
Sbjct: 302 VVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFK 361

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           E     +  DVV Y++LID LCK G +  A+ L+DEM   G+ P+++TY+SI+DA  ++
Sbjct: 362 EMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKN 420



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 189/361 (52%), Gaps = 7/361 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L   G++  A    +  +  G+      +  LI    + G  + A+ +   +  
Sbjct: 131 TTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDG 190

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD---DMLRNGVQPDRITFNSLLAVCSRGG 313
             ++PN+V Y+ +ID   K     KHV + FD   +M+  G+ P+ +T+++L++     G
Sbjct: 191 NLVQPNVVMYSTIIDGMCKD----KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVG 246

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             + A +LFN+M+   I  D++T+N L+D  CK  +M     + A M  + I PNVVTY 
Sbjct: 247 QLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYC 306

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           +++DGY     ++ A ++   M   G+  D  SYN ++  + K+ + +EA+ + KEM   
Sbjct: 307 SLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHK 366

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            I  D VTYN+L+ G  K GK     ++ ++M    V P+++TYS+++D   K     +A
Sbjct: 367 HIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKA 426

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           + +  + K  G++ ++  Y+ LID LCK G +E A ++ +++  +G    V TY  +I  
Sbjct: 427 IALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHG 486

Query: 554 F 554
           F
Sbjct: 487 F 487



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 176/325 (54%), Gaps = 1/325 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + S +I  + +   V+ A +++   +++G    V  +SALIS +   G  ++AI +FN M
Sbjct: 199 MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKM 258

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
              N+KP++ T+N ++D   K G   K    +F  M++ G++P+ +T+ SL+        
Sbjct: 259 ILENIKPDVYTFNILVDGFCKDG-KMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKE 317

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A+++   M  RG++ DI +YN L+D  CK  ++D A  +  EM  K+I P+VVTY++
Sbjct: 318 VNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNS 377

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDG  K G++  AL +  EM   G+  D ++Y+++L    K  + ++A+ +  +++  G
Sbjct: 378 LIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQG 437

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           IR +  TY  L+ G  K G+ ++   +FE +     +  + TY+ +I  +   GL+ EA+
Sbjct: 438 IRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAL 497

Query: 495 QIFREFKQAGLKADVVLYSALIDAL 519
            +  + K      D V Y  +I +L
Sbjct: 498 ALLSKMKDNSCIPDAVTYEIIIRSL 522



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 220/466 (47%), Gaps = 66/466 (14%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +S++ + +  +    +A S+F+ + R N  P  + +N ++ +  K    +  V+ +   M
Sbjct: 44  YSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSK-HYHTVLSLSQQM 102

Query: 291 LRNGV----------------QPDRITFNSLL-AVCSRGGLWEAARNLFNE-MVHRGIDQ 332
              G+                 P+ ITF +L+  +C +G + +A   LF++ +V  G   
Sbjct: 103 EFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQAL--LFHDNVVAMGFQL 160

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D   Y TL+  +CK  +   A +++  +    + PNVV YST+IDG  K   ++DA +++
Sbjct: 161 DQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLY 220

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           SEM   GI  + V+Y+ ++S +  +G+ ++A+ +  +M    I+ D  T+N L+ G+ K 
Sbjct: 221 SEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKD 280

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           GK  E + +F  M    + PN++TY +L+D Y       +A  I     Q G+  D+  Y
Sbjct: 281 GKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSY 340

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGRSATTECTVDDVER 569
           + LID  CK   V+ A++L  EM  + I P+VVTYNS+ID     G+ +     VD++  
Sbjct: 341 NILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEM-H 399

Query: 570 DLGKQKE----SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
           D G   +    S+ LDA+C     D   A             L+ +   QG         
Sbjct: 400 DRGVPPDIITYSSILDALCKNHQVDKAIA-------------LLTKLKDQG--------- 437

Query: 626 ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                          I+PN+ T++ +++   +    EDA  + E+L
Sbjct: 438 ---------------IRPNMYTYTILIDGLCKGGRLEDAHNIFEDL 468



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 199/442 (45%), Gaps = 56/442 (12%)

Query: 251 FNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCS 310
           FN +   + K N + Y++ I        D      +F  +LR    P  I FN +L    
Sbjct: 29  FNFIPYSSSKINFIPYSS-ISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLV 87

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           +   +    +L  +M   GI+  +F +                 ++M         PN +
Sbjct: 88  KSKHYHTVLSLSQQMEFEGINPVLFHFQH-------------PHQLMGY------HPNTI 128

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           T++T+I G    G++  AL     +  +G  LD+V Y T++    K+G    AL + + +
Sbjct: 129 TFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRV 188

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           + + ++ + V Y+ ++ G  K    ++   ++ +M +  +SPN++TYS LI  +   G  
Sbjct: 189 DGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQL 248

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           K+A+ +F +     +K DV  ++ L+D  CK+G ++   ++   M K+GI+PNVVTY S+
Sbjct: 249 KDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSL 308

Query: 551 IDAFGRSATTECTVDDV-----------ERDLGKQKESANL--DAMCSQDDKDVQEAGRT 597
           +D +       C V +V           +R +    +S N+  D  C    K V EA   
Sbjct: 309 MDGY-------CLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKI--KKVDEA--- 356

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSA 650
               + +F ++  +             + LC LG       +  +MH   + P+++T+S+
Sbjct: 357 ----MNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSS 412

Query: 651 ILNACSRCNSFEDASMLLEELR 672
           IL+A  + +  + A  LL +L+
Sbjct: 413 ILDALCKNHQVDKAIALLTKLK 434


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 194/387 (50%), Gaps = 41/387 (10%)

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           LA +     +  G+   +  F++LI+ +      +EA+S+ N M    +KP++V Y  +I
Sbjct: 125 LASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTII 184

Query: 271 DA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
           D+ C  G V++   + +FD M   G++PD + + SL+      G W  A +L   M  R 
Sbjct: 185 DSLCKNGHVNY--ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK 242

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           I  D+ T+N L+DA  K  +   A E+  EM   +I+PN+ TY+++I+G+   G +D+A 
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            MF  M+  G   D V+Y ++++ + K  + ++A+ +  EM   G+  + +TY  L+ G+
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA---GLK 506
           G+ GK +  + +F  M +  V PN+ TY+ L+      G  K+A+ IF + ++    G+ 
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA 422

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTK----------------------------- 537
            ++  Y+ L+  LC NG +E A+ + ++M K                             
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482

Query: 538 ------EGIRPNVVTYNSIIDAFGRSA 558
                 +G++PNVVTY ++I    R  
Sbjct: 483 FCSLPSKGVKPNVVTYTTMISGLFREG 509



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 208/431 (48%), Gaps = 35/431 (8%)

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
            EA+ +F  M      P+++ +  +++   K    F  V+ + D +   GV  D  T N 
Sbjct: 54  NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMK-KFDVVINLCDHLQIMGVSHDLYTCNL 112

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L+    +      A +   +M+  G + DI T+ +L++  C G +M+ A  ++ +M    
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           I P+VV Y+T+ID   K G ++ AL++F +M+  GI  D V Y ++++     GR+ +A 
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            + + M    I+ D +T+NAL+  + K+GK+ +   ++ +M    ++PN+ TY++LI+ +
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
              G   EA Q+F   +  G   DVV Y++LI+  CK   V+ A+ +  EM+++G+  N 
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
           +TY ++I  FG+                  K +   +       + V    RT N ++  
Sbjct: 353 ITYTTLIQGFGQVG----------------KPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK---IKPNVVTFSAILNACSRCNSF 661
                    G+ KK           L +F+ M K +   + PN+ T++ +L+        
Sbjct: 397 LCY-----NGKVKKA----------LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKL 441

Query: 662 EDASMLLEELR 672
           E A M+ E++R
Sbjct: 442 EKALMVFEDMR 452



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 188/349 (53%), Gaps = 4/349 (1%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I  L + G V+ A ++F+   N G    V  +++L++    SG  ++A S+   M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
            +  +KP+++T+NA+IDA  K G  F    E++++M+R  + P+  T+ SL+      G 
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEG-KFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            + AR +F  M  +G   D+  Y +L++  CK  ++D A +I  EM  K ++ N +TY+T
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM---E 431
           +I G+ + G+ + A  +FS M   G+  +  +YN +L      G+ ++AL++ ++M   E
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G+  +  TYN LL G    GK ++   +FE M+   +   ++TY+ +I    K G  K
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
            A+ +F      G+K +VV Y+ +I  L + GL   A  L  +M ++G+
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/419 (23%), Positives = 191/419 (45%), Gaps = 47/419 (11%)

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           Q + A ++   M      P+++ ++ +++  AK  + D  +N+   ++ +G+  D  + N
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +++ + +  +   A     +M   G   D VT+ +L+ G+    + +E   M  QM   
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + P+++ Y+T+ID   K G    A+ +F + +  G++ DVV+Y++L++ LC +G    A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
            SLL  MTK  I+P+V+T+N++IDAF                    KE   LDA   +  
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAF-------------------VKEGKFLDA--EELY 270

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
            ++       N  I  +  L+     +G  +   RQ       +F  M      P+VV +
Sbjct: 271 NEMIRMSIAPN--IFTYTSLINGFCMEGCVD-EARQ-------MFYLMETKGCFPDVVAY 320

Query: 649 SAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGY----RDNIWVQALSLF 701
           ++++N   +C   +DA  +  E+    L  N +      L+ G+    + N+   A  +F
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI--TYTTLIQGFGQVGKPNV---AQEVF 375

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQ---VWENVWSESCLDLH 757
             +           YN L   L + G+ + A ++  + ++R+   V  N+W+ + L LH
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL-LH 433



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 158/317 (49%), Gaps = 8/317 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L N G W  A        KR+ + +      +A+I    + GK   A+ ++  
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT--FNALIDAFVKEGKFLDAEELYNE 272

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +       ++ +++LI+ +   G   EA  +F  M+     P++V Y ++I+  C    
Sbjct: 273 MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK 332

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           VD    ++IF +M + G+  + IT+ +L+    + G    A+ +F+ MV RG+  +I TY
Sbjct: 333 VD--DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY 390

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKN---ISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
           N LL  +C   ++  A  I  +M  +    ++PN+ TY+ ++ G    G+L+ AL +F +
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M+   + +  ++Y  ++    K G+ + A+ +   + S G++ + VTY  ++ G  ++G 
Sbjct: 451 MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGL 510

Query: 455 YDEVRRMFEQMKADCVS 471
             E   +F +MK D VS
Sbjct: 511 KHEAHVLFRKMKEDGVS 527


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 229/454 (50%), Gaps = 18/454 (3%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           ++ F  L+ A  R G+   AIS+F+ +    + P++ T   +I+  C +  + F     +
Sbjct: 55  IFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSF--AFSL 112

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              +L+ G QP+ +TFN+L+      G+   A     +++ +G   D F+Y +L++ +CK
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCK 172

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             Q   A +++ +M    + PN++TYST+IDG  K   + DAL +FS +   GI +D V+
Sbjct: 173 NGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVA 232

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN+++     +G++ EA  +   M    I  D  T+N L+    K+G+  E + +F  M 
Sbjct: 233 YNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMM 292

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
                P+++TY+ L++ +       EA ++F    + GL+ DV+ Y+ LI+  CK  +V+
Sbjct: 293 KRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVD 352

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKESAN----L 580
            A+ L  E+  + + PN+ TYNS+ID   +     C  + V+   D G+  +       L
Sbjct: 353 EAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFL 412

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
           DA C    K  ++A     QI++  G            EN C+ E L I    + +  L 
Sbjct: 413 DAFCKS--KPYEKAISLFRQIVQ--GIWPDFYMYDVIVENFCKGEKLKIAE--EALQHLL 466

Query: 641 IK---PNVVTFSAILNACSRCNSFEDASMLLEEL 671
           I    PNV T++ ++NA  +  SF++A  LL ++
Sbjct: 467 IHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKM 500



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 192/356 (53%), Gaps = 6/356 (1%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           +GY    +++ +LI+   ++G  ++A+ +   M+   ++PNL+TY+ VID   K  +   
Sbjct: 154 KGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRL-IA 212

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             + +F  +   G+  D + +NSL+  C   G W  A  L   MV   I+ D +T+N L+
Sbjct: 213 DALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILV 272

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           DA+CK  ++  A  + A M  +   P++VTY+ +++G+  +  + +A  +F+ M   G+ 
Sbjct: 273 DALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLE 332

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D ++YN +++ Y K+   +EA+++ KE+    +  +  TYN+L+ G  K G+   V+ +
Sbjct: 333 PDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQEL 392

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            ++M     SP+++TY+  +D + K   Y++A+ +FR+  Q G+  D  +Y  +++  CK
Sbjct: 393 VDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCK 451

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
              ++ A   L  +   G  PNV TY  +I+A  +    +C+ D+    L K  ++
Sbjct: 452 GEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCK----DCSFDEAMTLLSKMDDN 503



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 184/369 (49%), Gaps = 7/369 (1%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           KL  A++    R+G    A ++F    ++G   ++   + LI+ Y    +   A S+  +
Sbjct: 60  KLLGAIV----RMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGT 115

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           + +   +PN+VT+N +I+  C  G V       +  D++  G   D  ++ SL+    + 
Sbjct: 116 ILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRL--DLMAKGYPLDEFSYGSLINGLCKN 173

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G    A  L  +M    +  ++ TY+T++D +CK   +  A  + + + ++ I  +VV Y
Sbjct: 174 GQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAY 233

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +++I G    G+  +A  + + M    I  D  ++N ++    K GR  EA  V   M  
Sbjct: 234 NSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMK 293

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G + D VTYNAL+ G+       E R +F +M    + P++L Y+ LI+ Y K  +  E
Sbjct: 294 RGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDE 353

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           AM +F+E +   L  ++  Y++LID LCK G +     L+DEM   G  P++VTYN  +D
Sbjct: 354 AMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLD 413

Query: 553 AFGRSATTE 561
           AF +S   E
Sbjct: 414 AFCKSKPYE 422



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 10/333 (3%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  +F    + G    V A+++LI      G  +EA  +   M R N+ P+  T+N ++D
Sbjct: 214 ALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVD 273

Query: 272 ACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVH 327
           A  K G     +VE   +F  M++ G +PD +T+N+L+   C    + EA R LFN MV 
Sbjct: 274 ALCKEG----RIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEA-RELFNRMVK 328

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           RG++ D+  YN L++  CK   +D A  +  E+  KN+ PN+ TY+++IDG  K GR+  
Sbjct: 329 RGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSC 388

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
              +  EM   G   D V+YN  L  + K   +E+A+ + +++   GI  D   Y+ ++ 
Sbjct: 389 VQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVE 447

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
            + K  K        + +      PN+ TY+ +I+   K   + EAM +  +        
Sbjct: 448 NFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPP 507

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           D V +  +I AL +    + A  L  EM + G+
Sbjct: 508 DAVTFETIIGALQERNETDKAEKLRLEMIERGL 540



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 188/397 (47%), Gaps = 20/397 (5%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F+ MLR    P    F+ LL    R G +  A +LF+++  +GI   I T   L++  C 
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
            A +  AF ++  +      PN+VT++T+I+G+   G +  A+    ++   G  LD  S
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y ++++   K G+  +AL + ++ME   +R + +TY+ ++ G  K     +  R+F  + 
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           +  +  +++ Y++LI      G ++EA ++     +  +  D   ++ L+DALCK G + 
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF----GRSATTECTVDDVERDLGKQKESAN--L 580
            A  +   M K G +P++VTYN++++ F      S   E     V+R L     + N  +
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 581 DAMCSQDDKD----VQEAGRTDNQI--IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
           +  C  D  D    + +  R  N +  +  +  L+      G+    C QE++       
Sbjct: 343 NGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMS--CVQELV------D 394

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +M      P++VT++  L+A  +   +E A  L  ++
Sbjct: 395 EMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI 431



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 6/284 (2%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           DDYTF  L+  L   G   +A   FA  +KR E+ +      +A++        V  A+ 
Sbjct: 264 DDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVT--YNALMEGFCLSNNVSEARE 321

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +F   +  G    V  ++ LI+ Y +     EA+ +F  ++  NL PNL TYN++ID   
Sbjct: 322 LFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLC 381

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K G     V E+ D+M   G  PD +T+N  L    +   +E A +LF ++V +GI  D 
Sbjct: 382 KLG-RMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV-QGIWPDF 439

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
           + Y+ +++  CKG ++ +A E +  +      PNV TY+ MI+   K    D+A+ + S+
Sbjct: 440 YMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSK 499

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           M       D V++ T++    +    ++A  +  EM   G+  D
Sbjct: 500 MDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 88/219 (40%), Gaps = 37/219 (16%)

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D+    F +M      P +  +  L+    + G Y  A+ +F +    G+   +   + L
Sbjct: 37  DDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTIL 96

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           I+  C    +  A SLL  + K G +PN+VT+N++I+ F       C    V + +  + 
Sbjct: 97  INCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGF-------CINGMVSKAMAFR- 148

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
               LD M      D    G   N +          K GQ +            L + QK
Sbjct: 149 ----LDLMAKGYPLDEFSYGSLINGLC---------KNGQTRDA----------LQLLQK 185

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
           M +  ++PN++T+S +++   +     DA      LRLF
Sbjct: 186 MEEDLVRPNLITYSTVIDGLCKDRLIADA------LRLF 218


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 153/551 (27%), Positives = 254/551 (46%), Gaps = 53/551 (9%)

Query: 196 ASAMISILGR------LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS 249
           A+A++S L R         +D+ +++    L+  +    Y F+ L+  +   G   +A+S
Sbjct: 176 ANAVLSALARSPSTSPQASLDVFRSLIALRLHPNH----YTFNLLVHTHCSKGTLADALS 231

Query: 250 VFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
             ++M+ + L P++VTYN ++ A C KG +       +   M + G+ P R T+N+L++ 
Sbjct: 232 TLSTMQGFGLSPDVVTYNTLLKAHCRKGMLG--EARTLLARMKKEGIAPTRATYNTLVSA 289

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI-SP 367
            +R G  + A N+   M   G + D++TYN L   +C+  ++D AF++  EM   +I SP
Sbjct: 290 YARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSP 349

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           +VVTY+T++D   K  R  DALN+  EM+  G+    V++N V+    + G+ EEAL   
Sbjct: 350 DVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRL 409

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           K M   G+  D +TYN L+  Y K     +   + ++M    +  +  T +TL+    K 
Sbjct: 410 KMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKE 469

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
             Y+EA ++ R   Q G   D V Y  ++ A  K    E A+ L DEM+K  + P++ TY
Sbjct: 470 KRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTY 529

Query: 548 NSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF-- 605
           N++I          CT+       GK  E+  +D +     K +     T N II  +  
Sbjct: 530 NTLIKGL-------CTI-------GKLTEA--IDKLNELMKKGLVPDDTTYNIIIHAYCK 573

Query: 606 -GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
            G L  EKA Q                   KM +   KP+VVT + ++N        E A
Sbjct: 574 EGDL--EKAFQ----------------FHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKA 615

Query: 665 SMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASAFYNALTDM 722
             L E       +V  + +  L+    +D     AL  F +++       +  YN +   
Sbjct: 616 IKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSA 675

Query: 723 LWHFGQKRGAQ 733
           L   G+   AQ
Sbjct: 676 LSEAGRSEEAQ 686



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 203/419 (48%), Gaps = 39/419 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S   RLG +  A N+ E     G+   ++ ++ L +   ++G   EA  + + M+ 
Sbjct: 284 NTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEH 343

Query: 257 YNL-KPNLVTYNAVIDACGK--GGVDFKHVVEIFDD------------------------ 289
            ++  P++VTYN ++DAC K     D  +++E   D                        
Sbjct: 344 LSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLE 403

Query: 290 --------MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
                   M   G+ PD IT+N+L+    +      A  L +EMV  G+  D FT NTLL
Sbjct: 404 EALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLL 463

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             +CK  + + A E++   P +   P+ V+Y T++  Y K  + + AL ++ EM    + 
Sbjct: 464 YNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLT 523

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
               +YNT++     +G+  EA+    E+   G+  D  TYN ++  Y K+G  ++  + 
Sbjct: 524 PSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQF 583

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
             +M  +   P+++T +TL++     G  ++A+++F  + + G K DV+ Y+ LI ALCK
Sbjct: 584 HNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCK 643

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           +G V++A+    +M   G++P+  TYN ++ A   +  +E    + +  L K  ES  L
Sbjct: 644 DGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSE----EAQNMLHKLDESGKL 698



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 207/396 (52%), Gaps = 25/396 (6%)

Query: 292 RNGVQPDRITFNSLLAVCSRGGLW--EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           R  V+P     N++L+  +R      +A+ ++F  ++   +  + +T+N L+   C    
Sbjct: 166 RGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGT 225

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  A   ++ M    +SP+VVTY+T++  + + G L +A  + + MK  GI   R +YNT
Sbjct: 226 LADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNT 285

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK-AD 468
           ++S YA+LG  ++A  V + M + G   D  TYN L  G  + GK DE  ++ ++M+   
Sbjct: 286 LVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLS 345

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            VSP+++TY+TL+D   K     +A+ +  E +  G+K+ +V ++ ++  LC+ G +E A
Sbjct: 346 IVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEA 405

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRS---ATTECTVDDVERDLGKQKESANLDA--- 582
           +  L  MT+EG+ P+V+TYN++IDA+ ++   A     +D++ R  G + ++  L+    
Sbjct: 406 LGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRS-GLKMDTFTLNTLLY 464

Query: 583 -MCSQDD-KDVQEAGRTDNQIIKV-----FGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
            +C +   ++ +E  R+  Q   V     +G ++A    + K E          L ++ +
Sbjct: 465 NLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEP--------ALYLWDE 516

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           M K K+ P++ T++ ++          +A   L EL
Sbjct: 517 MSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNEL 552



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 158/300 (52%), Gaps = 4/300 (1%)

Query: 255 KRYNLKPNLVTYNAVIDACGKG-GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV-CSRG 312
           +R +++P+L   NAV+ A  +      +  +++F  ++   + P+  TFN L+   CS+G
Sbjct: 165 RRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKG 224

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            L +A   L + M   G+  D+ TYNTLL A C+   +  A  ++A M  + I+P   TY
Sbjct: 225 TLADALSTL-STMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATY 283

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T++  YA+ G +  A N+   M   G   D  +YN + +   + G+ +EA  +  EME 
Sbjct: 284 NTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEH 343

Query: 433 -SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            S +  D VTYN L+    K  +  +   + E+M+   V  +L+T++ ++    + G  +
Sbjct: 344 LSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLE 403

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA+   +   + GL  DV+ Y+ LIDA CK   V  A  L+DEM + G++ +  T N+++
Sbjct: 404 EALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLL 463



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/414 (23%), Positives = 180/414 (43%), Gaps = 72/414 (17%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A N+ E   ++G  +++   + ++    R G  +EA+     M    L P+++TYN +ID
Sbjct: 370 ALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLID 429

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           A  K     K  V + D+M+R+G++ D  T N+LL    +   +E A  L      RG  
Sbjct: 430 AYCKARNVAKAFV-LMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFV 488

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  +Y T++ A  K  + + A  +  EM  + ++P++ TY+T+I G    G+L +A++ 
Sbjct: 489 PDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDK 548

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA---------------LLVC--------- 427
            +E+   G+  D  +YN ++  Y K G  E+A               ++ C         
Sbjct: 549 LNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCL 608

Query: 428 --------KEMES---SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
                   K  ES    G + D +TYN L+    K G  D     F  M+A  + P+  T
Sbjct: 609 HGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFT 668

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAG-------------------------LKADVVL 511
           Y+ ++   S+ G  +EA  +  +  ++G                         +K+D   
Sbjct: 669 YNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCES 728

Query: 512 -----------YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
                      Y+  +  LC  G ++ A ++LDEM ++G+  +  TY ++++  
Sbjct: 729 GGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGL 782



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 154/319 (48%), Gaps = 18/319 (5%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ +  +    G+     ++  +++AY +    + A+ +++ M +  L P++ TYN +I 
Sbjct: 475 AEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIK 534

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGI 330
                G      ++  +++++ G+ PD  T+N ++ A C  G L E A    N+M+    
Sbjct: 535 GLCTIG-KLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDL-EKAFQFHNKMLENYF 592

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             D+ T NTL++ +C   +++ A ++      K    +V+TY+T+I    K G +D AL+
Sbjct: 593 KPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALH 652

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
            F++M+  G+  D  +YN VLS  ++ GR EEA  +  +++ SG   +  +Y  +     
Sbjct: 653 FFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAE 712

Query: 451 --KQGKYDEVRRMFEQMKADCVS------PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             K GK  EV       K+DC S       +  +Y+  +     GG  KEA  +  E  Q
Sbjct: 713 EVKTGKDPEV-------KSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQ 765

Query: 503 AGLKADVVLYSALIDALCK 521
            G+  D   Y  L++ L K
Sbjct: 766 KGMSVDSSTYITLMEGLIK 784



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 143/324 (44%), Gaps = 27/324 (8%)

Query: 135 FARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK 194
           F  D+VS G ++  + FK    +   +L  E+  R + + +I  +               
Sbjct: 487 FVPDEVSYGTVMAAY-FKENKPEPALYLWDEMSKR-KLTPSIYTY--------------- 529

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
             + +I  L  +GK+  A +     + +G       ++ +I AY + G  ++A    N M
Sbjct: 530 --NTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKM 587

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
                KP++VT N +++  C  G ++    +++F+     G + D IT+N+L+    + G
Sbjct: 588 LENYFKPDVVTCNTLMNGLCLHGKLE--KAIKLFESWAEKGKKVDVITYNTLIQALCKDG 645

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             + A + F +M  RG+  D FTYN +L A+ +  + + A  ++ ++          +Y 
Sbjct: 646 DVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYP 705

Query: 374 TMIDGYA---KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
            +I   A   K G+ D  +    E      G D+ SYN  +      G+ +EA  V  EM
Sbjct: 706 -LIKSSAEEVKTGK-DPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEM 763

Query: 431 ESSGIRKDAVTYNALLGGYGKQGK 454
              G+  D+ TY  L+ G  K+ K
Sbjct: 764 MQKGMSVDSSTYITLMEGLIKRQK 787


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 222/434 (51%), Gaps = 9/434 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L   G+  +    F+ A+ R  + +    + S+++    R+G +  A  ++  
Sbjct: 313 YSILINGLFRAGKLEEGNSLFSMALARGVKMDVV--IFSSIMDAYVRVGDLGKAIEVYTR 370

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L EG    V  +S LI+   R+G   EA  VF  + +  L+P+++TY+++ID   K   
Sbjct: 371 MLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSE- 429

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           + +    ++  MLR G  PD +  + L+   SR G+ + A   F + V RG+  + + +N
Sbjct: 430 NLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFN 489

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+D   +  +     ++   M    + P+VVTY+ ++ G A+ GRLD+AL +F ++   
Sbjct: 490 ALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKK 549

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   D + Y T++  + K       L + K M+S+GI  D   YN L+  + ++G  + V
Sbjct: 550 GFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENV 609

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +  ++    + P+++TY+T+I  Y    ++ +A+++F   K    + + + ++ LIDA
Sbjct: 610 LELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDA 669

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ---- 574
            CK+G ++ A+ +   M + G  PN++TY+ +ID + ++  TE   +  E+ LG +    
Sbjct: 670 YCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPN 729

Query: 575 --KESANLDAMCSQ 586
               S  +D +C +
Sbjct: 730 IVSYSILIDGLCKK 743



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 158/646 (24%), Positives = 289/646 (44%), Gaps = 77/646 (11%)

Query: 114 KIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWS 173
           K+ +S  H   A E L  +    R DV    IL+ +E    G   Y F+      RGE  
Sbjct: 168 KMGVSISH-YAASEMLDLLIDSDRIDV----ILENYEEMCKGLGVYEFVFNSFLKRGEVE 222

Query: 174 KAIQCFAFAVKRE--ERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAF 231
           K +      V+R    +  D  K+   +   +G   ++ +A + F+  +  G    +  F
Sbjct: 223 KGLNFHRALVERGLVPKIVDCNKILKGLC--MGN--QIGVASDFFDMMVRSGPSPNLVTF 278

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV------------- 278
           S LI+ Y +     EA S++N M    + P+LV Y+ +I+   + G              
Sbjct: 279 STLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALA 338

Query: 279 ---------------------DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
                                D    +E++  ML+ G+ P+ +T++ L+  +C  G + E
Sbjct: 339 RGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLE 398

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           A   +F +++ +G++  + TY++L+D  CK   +   F +   M  K   P+VV  S +I
Sbjct: 399 AC-GVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLI 457

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G ++ G +D+AL  F +    G+ L+   +N ++    +L R  + L +   M    + 
Sbjct: 458 NGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVI 517

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTY  L+ G  +QG+ DE   +F Q+     SP+ + Y TLID + K       +QI
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F+  +  G+  D+ +Y+ LI+   + G VE+ + LL E+ K G+ P++VTYN++I  +  
Sbjct: 578 FKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCS 637

Query: 557 SATTECTVDDVE-RDLGKQKESAN-----LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
                  +   E    G+ + +A      +DA C    KD    GR D+ ++ +F  ++ 
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYC----KD----GRMDDAML-IFSSMLE 688

Query: 611 EKAGQGKKENRC-------RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
                      C        +       +++KM   ++ PN+V++S +++   +    E+
Sbjct: 689 RGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEE 748

Query: 664 ASMLLE----ELRLFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEV 704
           AS+  +       L D   YG+   L+ GY +     +A+ L+D +
Sbjct: 749 ASLAFQCAIGRHLLPDVIAYGI---LIRGYCKVGRLAEAMMLYDHM 791



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 169/349 (48%), Gaps = 1/349 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + S +I+ L R G +D A   F  A+  G     Y F+ALI    R    ++ + ++  M
Sbjct: 452 VCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILM 511

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
             Y + P++VTY  ++    + G      + +F  +L+ G  PD I + +L+    +   
Sbjct: 512 GMYKVIPDVVTYTVLVKGLAEQG-RLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRD 570

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
                 +F  M   GI  DI  YN L++   +   ++   E++ E+    + P++VTY+T
Sbjct: 571 PATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNT 630

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           MI GY        A+ +F  +K      + +++  ++  Y K GR ++A+L+   M   G
Sbjct: 631 MICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERG 690

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              + +TY+ L+ GY K    +    ++E+M  D VSPN+++YS LID   K GL +EA 
Sbjct: 691 PEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEAS 750

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             F+      L  DV+ Y  LI   CK G +  A+ L D M   GI P+
Sbjct: 751 LAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 224/482 (46%), Gaps = 28/482 (5%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           ++  G+ P  +  N +L     G     A + F+ MV  G   ++ T++TL++  CK  +
Sbjct: 231 LVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELR 290

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D AF +   M  K I P++V YS +I+G  +AG+L++  ++FS     G+ +D V +++
Sbjct: 291 LDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSS 350

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++  Y ++G   +A+ V   M   GI  + VTY+ L+ G  + G+  E   +F Q+    
Sbjct: 351 IMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQG 410

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + P++LTYS+LID + K    ++   ++    + G   DVV+ S LI+ L + G+++ A+
Sbjct: 411 LEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEAL 470

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC-SQDD 588
               +  K G+  N   +N++ID   R   T    D ++  +         D +  +   
Sbjct: 471 RFFFQAVKRGLTLNNYLFNALIDGCFRLKRTR---DGLKMYILMGMYKVIPDVVTYTVLV 527

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI--------------LGVFQ 634
           K + E GR D + + +F QL+       KK       I C               L +F+
Sbjct: 528 KGLAEQGRLD-EALALFFQLL-------KKGFSPDHIIYCTLIDGFCKKRDPATGLQIFK 579

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG-LLMGYRD-N 692
            M    I P++  ++ ++N   R    E+   LL E+  +  +   V +  ++ GY    
Sbjct: 580 LMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLK 639

Query: 693 IWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES 752
           I+ +A+ LF+ +K   +   +  +  L D     G+   A L+      R    N+ + S
Sbjct: 640 IFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYS 699

Query: 753 CL 754
           CL
Sbjct: 700 CL 701



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 142/302 (47%), Gaps = 32/302 (10%)

Query: 287 FDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           F    RN G  P  + ++ LL    R G+ + A + F  M   G+    +  + +LD + 
Sbjct: 128 FHGSFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLI 186

Query: 346 KGAQMDLAFEIMAEM------------------------------PAKNISPNVVTYSTM 375
              ++D+  E   EM                                + + P +V  + +
Sbjct: 187 DSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKI 246

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G     ++  A + F  M   G   + V+++T++++Y K  R +EA  +   M   GI
Sbjct: 247 LKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGI 306

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D V Y+ L+ G  + GK +E   +F    A  V  +++ +S+++D Y + G   +A++
Sbjct: 307 VPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIE 366

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           ++    + G+  +VV YS LI+ LC+NG V  A  +  ++ K+G+ P+V+TY+S+ID F 
Sbjct: 367 VYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFC 426

Query: 556 RS 557
           +S
Sbjct: 427 KS 428



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 183/420 (43%), Gaps = 47/420 (11%)

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            Y+ LL   C+   +D A +  A M    +S +    S M+D    + R+D  L  + EM
Sbjct: 142 VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM 201

Query: 396 -KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
            K LG+      Y  V + + K G  E+ L   + +   G+    V  N +L G     +
Sbjct: 202 CKGLGV------YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQ 255

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
                  F+ M     SPNL+T+STLI+VY K     EA  ++    + G+  D+V+YS 
Sbjct: 256 IGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSI 315

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           LI+ L + G +E   SL       G++ +VV ++SI+DA+ R             DLGK 
Sbjct: 316 LINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVG-----------DLGKA 364

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
            E              + + G + N +   +  L+      G+    C        GVF 
Sbjct: 365 IEVYT----------RMLKEGISPNVV--TYSILINGLCRNGRVLEAC--------GVFG 404

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDA----SMLLEELRLFDNQVYG-VAHGLLMGY 689
           ++ K  ++P+V+T+S++++   +  +  D      ++L +  + D  V   + +GL    
Sbjct: 405 QILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGL---S 461

Query: 690 RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKR-GAQLVVLEGKRRQVWENV 748
           R  +  +AL  F +      +  +  +NAL D  +   + R G ++ +L G  + + + V
Sbjct: 462 RQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVV 521


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 192/365 (52%), Gaps = 5/365 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           M+   G  G +    ++    +  G     + F+   SAY + G   +A+ +FN M+++ 
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
           L P+ V+Y A+IDA C  G VD   V   F+ M+  GV P+ + F+SL+  +CS    WE
Sbjct: 61  LSPDAVSYGALIDALCKLGRVDDAEVK--FNQMINEGVTPNIVVFSSLVYGLCSIDK-WE 117

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               LF EM++ GI  +I  +NT+L  +CK  ++     ++  +    + P+V++Y+T+I
Sbjct: 118 KVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLI 177

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG+  AG +D+A  +   M  +G+  +  SYNT+L  Y K GR + A  + ++M S+GI 
Sbjct: 178 DGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGIT 237

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              VTYN +L G  +  ++ E + ++  M        + TY+T+++   K     EA ++
Sbjct: 238 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKM 297

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F+     GL+ +++ ++ +I AL K G  E A+ L   +   G+ P+VVTY  + +    
Sbjct: 298 FQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIE 357

Query: 557 SATTE 561
             + E
Sbjct: 358 EGSLE 362



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 196/392 (50%), Gaps = 7/392 (1%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           +L   GN+G  S+        V      N    + +   S   + G +D A +IF     
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHH--IFNIFFSAYAKCGMIDKAMDIFNKMRQ 58

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD-F 280
            G      ++ ALI A  + G   +A   FN M    + PN+V +++++   G   +D +
Sbjct: 59  HGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLV--YGLCSIDKW 116

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
           + V E+F +ML  G+ P+ + FN++L  +C  G + E  R L + +   G+  D+ +YNT
Sbjct: 117 EKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQR-LVDSIECMGVRPDVISYNT 175

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+D  C    +D A +++  M +  + PN  +Y+T++ GY KAGR+D A ++F +M   G
Sbjct: 176 LIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNG 235

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I    V+YNT+L    +  RF EA  +   M +SG +    TYN +L G  K    DE  
Sbjct: 236 ITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAF 295

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           +MF+ + +  +  N++T++ +I    KGG  ++AM +F      GL  DVV Y  + + L
Sbjct: 296 KMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENL 355

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            + G +E   SL   M K G  PN    N+++
Sbjct: 356 IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 387



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 175/332 (52%), Gaps = 1/332 (0%)

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN 293
           ++  YG  G   E   + N M    + PN   +N    A  K G+     ++IF+ M ++
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGM-IDKAMDIFNKMRQH 59

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G+ PD +++ +L+    + G  + A   FN+M++ G+  +I  +++L+  +C   + +  
Sbjct: 60  GLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKV 119

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
            E+  EM    I PN+V ++T++    K GR+ +   +   ++ +G+  D +SYNT++  
Sbjct: 120 EELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDG 179

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           +   G  +EA  + + M S G++ ++ +YN LL GY K G+ D    +F +M ++ ++P 
Sbjct: 180 HCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPG 239

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           ++TY+T++    +   + EA +++     +G K  +  Y+ +++ LCK+  V+ A  +  
Sbjct: 240 VVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQ 299

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
            +  +G++ N++T+  +I A  +    E  +D
Sbjct: 300 SLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 331



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 181/359 (50%), Gaps = 5/359 (1%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+I  L +LG+VD A+  F   +NEG    +  FS+L+         ++   +F  M   
Sbjct: 70  ALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNV 129

Query: 258 NLKPNLVTYNAVI-DACGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            + PN+V +N ++ + C +G V + + +V+  + M   GV+PD I++N+L+      G  
Sbjct: 130 GIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECM---GVRPDVISYNTLIDGHCLAGTI 186

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  L   MV  G+  + F+YNTLL   CK  ++D A+ +  +M +  I+P VVTY+T+
Sbjct: 187 DEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTI 246

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G  +  R  +A  ++  M   G      +YNT+L+   K    +EA  + + + S G+
Sbjct: 247 LHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGL 306

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + +T+  ++G   K G+ ++   +F  + A+ + P+++TY  + +   + G  +E   
Sbjct: 307 QLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDS 366

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +F   ++ G   +  + +AL+  L   G +  A + L ++ +        T + +I  F
Sbjct: 367 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIF 425



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 128/259 (49%), Gaps = 3/259 (1%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V +++ LI  +  +G   EA  +   M    LKPN  +YN ++   C  G +D  +   +
Sbjct: 170 VISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAY--SL 227

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F  ML NG+ P  +T+N++L    +   +  A+ L+  M++ G    I+TYNT+L+ +CK
Sbjct: 228 FRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCK 287

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +D AF++   + +K +  N++T++ MI    K GR +DA+++F+ +   G+  D V+
Sbjct: 288 SNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVT 347

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y  V     + G  EE   +   ME +G   ++   NAL+     +G          ++ 
Sbjct: 348 YRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLD 407

Query: 467 ADCVSPNLLTYSTLIDVYS 485
               S    T S LI ++S
Sbjct: 408 ERNFSVEASTTSMLISIFS 426


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 222/434 (51%), Gaps = 9/434 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L   G+  +    F+ A+ R  + +    + S+++    R+G +  A  ++  
Sbjct: 313 YSILINGLFRAGKLEEGNSLFSMALARGVKMDVV--IFSSIMDAYVRVGDLGKAIEVYTR 370

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L EG    V  +S LI+   R+G   EA  VF  + +  L+P+++TY+++ID   K   
Sbjct: 371 MLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSE- 429

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           + +    ++  MLR G  PD +  + L+   SR G+ + A   F + V RG+  + + +N
Sbjct: 430 NLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFN 489

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+D   +  +     ++   M    + P+VVTY+ ++ G A+ GRLD+AL +F ++   
Sbjct: 490 ALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKK 549

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   D + Y T++  + K       L + K M+S+GI  D   YN L+  + ++G  + V
Sbjct: 550 GFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENV 609

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +  ++    + P+++TY+T+I  Y    ++ +A+++F   K    + + + ++ LIDA
Sbjct: 610 LELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDA 669

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ---- 574
            CK+G ++ A+ +   M + G  PN++TY+ +ID + ++  TE   +  E+ LG +    
Sbjct: 670 YCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPN 729

Query: 575 --KESANLDAMCSQ 586
               S  +D +C +
Sbjct: 730 IVSYSILIDGLCKK 743



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 161/651 (24%), Positives = 291/651 (44%), Gaps = 87/651 (13%)

Query: 114 KIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWS 173
           K+ +S  H   A E L  +    R DV    IL+ +E    G   Y F+      RGE  
Sbjct: 168 KMGVSISH-YAASEMLDLLIDSDRIDV----ILENYEEMCKGLGVYEFVFNSFLKRGEVE 222

Query: 174 KAIQCFAFAVKRE--ERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAF 231
           K +      V+R    +  D  K+   +   +G   ++ +A + F+  +  G    +  F
Sbjct: 223 KGLNFHRALVERGLVPKIVDCNKILKGLC--MGN--QIGVASDFFDMMVRSGPSPNLVTF 278

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV------------- 278
           S LI+ Y +     EA S++N M    + P+LV Y+ +I+   + G              
Sbjct: 279 STLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALA 338

Query: 279 ---------------------DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
                                D    +E++  ML+ G+ P+ +T++ L+  +C  G + E
Sbjct: 339 RGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLE 398

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           A   +F +++ +G++  + TY++L+D  CK   +   F +   M  K   P+VV  S +I
Sbjct: 399 AC-GVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLI 457

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G ++ G +D+AL  F +    G+ L+   +N ++    +L R  + L +   M    + 
Sbjct: 458 NGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVI 517

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTY  L+ G  +QG+ DE   +F Q+     SP+ + Y TLID + K       +QI
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F+  +  G+  D+ +Y+ LI+   + G VE+ + LL E+ K G+ P++VTYN++I  +  
Sbjct: 578 FKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCS 637

Query: 557 SATTECTVDDVE-RDLGKQKESAN-----LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
                  +   E    G+ + +A      +DA C    KD    GR D+ ++ +F  ++ 
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYC----KD----GRMDDAML-IFSSMLE 688

Query: 611 EKA------------GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
                          G  K EN           +++KM   ++ PN+V++S +++   + 
Sbjct: 689 RGPEPNILTYSCLIDGYFKTENTESA-----FELYEKMLGDRVSPNIVSYSILIDGLCKK 743

Query: 659 NSFEDASMLLE----ELRLFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEV 704
              E+AS+  +       L D   YG+   L+ GY +     +A+ L+D +
Sbjct: 744 GLMEEASLAFQCAIGRHLLPDVIAYGI---LIRGYCKVGRLAEAMMLYDHM 791



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 178/372 (47%), Gaps = 2/372 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + S +I+ L R G +D A   F  A+  G     Y F+ALI    R    ++ + ++  M
Sbjct: 452 VCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILM 511

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
             Y + P++VTY  ++    + G      + +F  +L+ G  PD I + +L+    +   
Sbjct: 512 GMYKVIPDVVTYTVLVKGLAEQG-RLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRD 570

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
                 +F  M   GI  DI  YN L++   +   ++   E++ E+    + P++VTY+T
Sbjct: 571 PATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNT 630

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           MI GY        A+ +F  +K      + +++  ++  Y K GR ++A+L+   M   G
Sbjct: 631 MICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERG 690

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              + +TY+ L+ GY K    +    ++E+M  D VSPN+++YS LID   K GL +EA 
Sbjct: 691 PEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEAS 750

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID-A 553
             F+      L  DV+ Y  LI   CK G +  A+ L D M   GI P+ +   ++ +  
Sbjct: 751 LAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYG 810

Query: 554 FGRSATTECTVD 565
           F  S    C ++
Sbjct: 811 FQDSQAKNCVLN 822



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 224/482 (46%), Gaps = 28/482 (5%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           ++  G+ P  +  N +L     G     A + F+ MV  G   ++ T++TL++  CK  +
Sbjct: 231 LVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELR 290

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D AF +   M  K I P++V YS +I+G  +AG+L++  ++FS     G+ +D V +++
Sbjct: 291 LDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSS 350

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++  Y ++G   +A+ V   M   GI  + VTY+ L+ G  + G+  E   +F Q+    
Sbjct: 351 IMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQG 410

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + P++LTYS+LID + K    ++   ++    + G   DVV+ S LI+ L + G+++ A+
Sbjct: 411 LEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEAL 470

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC-SQDD 588
               +  K G+  N   +N++ID   R   T    D ++  +         D +  +   
Sbjct: 471 RFFFQAVKRGLTLNNYLFNALIDGCFRLKRTR---DGLKMYILMGMYKVIPDVVTYTVLV 527

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI--------------LGVFQ 634
           K + E GR D + + +F QL+       KK       I C               L +F+
Sbjct: 528 KGLAEQGRLD-EALALFFQLL-------KKGFSPDHIIYCTLIDGFCKKRDPATGLQIFK 579

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG-LLMGYRD-N 692
            M    I P++  ++ ++N   R    E+   LL E+  +  +   V +  ++ GY    
Sbjct: 580 LMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLK 639

Query: 693 IWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES 752
           I+ +A+ LF+ +K   +   +  +  L D     G+   A L+      R    N+ + S
Sbjct: 640 IFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYS 699

Query: 753 CL 754
           CL
Sbjct: 700 CL 701



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 142/302 (47%), Gaps = 32/302 (10%)

Query: 287 FDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           F    RN G  P  + ++ LL    R G+ + A + F  M   G+    +  + +LD + 
Sbjct: 128 FHGSFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLI 186

Query: 346 KGAQMDLAFEIMAEM------------------------------PAKNISPNVVTYSTM 375
              ++D+  E   EM                                + + P +V  + +
Sbjct: 187 DSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKI 246

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G     ++  A + F  M   G   + V+++T++++Y K  R +EA  +   M   GI
Sbjct: 247 LKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGI 306

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D V Y+ L+ G  + GK +E   +F    A  V  +++ +S+++D Y + G   +A++
Sbjct: 307 VPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIE 366

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           ++    + G+  +VV YS LI+ LC+NG V  A  +  ++ K+G+ P+V+TY+S+ID F 
Sbjct: 367 VYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFC 426

Query: 556 RS 557
           +S
Sbjct: 427 KS 428



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 183/420 (43%), Gaps = 47/420 (11%)

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            Y+ LL   C+   +D A +  A M    +S +    S M+D    + R+D  L  + EM
Sbjct: 142 VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM 201

Query: 396 -KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
            K LG+      Y  V + + K G  E+ L   + +   G+    V  N +L G     +
Sbjct: 202 CKGLGV------YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQ 255

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
                  F+ M     SPNL+T+STLI+VY K     EA  ++    + G+  D+V+YS 
Sbjct: 256 IGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSI 315

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           LI+ L + G +E   SL       G++ +VV ++SI+DA+ R             DLGK 
Sbjct: 316 LINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVG-----------DLGKA 364

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
            E              + + G + N +   +  L+      G+    C        GVF 
Sbjct: 365 IEVYT----------RMLKEGISPNVV--TYSILINGLCRNGRVLEAC--------GVFG 404

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDA----SMLLEELRLFDNQVYG-VAHGLLMGY 689
           ++ K  ++P+V+T+S++++   +  +  D      ++L +  + D  V   + +GL    
Sbjct: 405 QILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGL---S 461

Query: 690 RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKR-GAQLVVLEGKRRQVWENV 748
           R  +  +AL  F +      +  +  +NAL D  +   + R G ++ +L G  + + + V
Sbjct: 462 RQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVV 521


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 241/484 (49%), Gaps = 25/484 (5%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I  L  L  +  AK +       G    +  ++ LI    +     EA+ +   +
Sbjct: 229 IYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDL 288

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
              +LKP++VTY  ++    K   +F+  +E+ D+ML     P     +SL+    + G 
Sbjct: 289 AGKDLKPDVVTYCTLVYGLCKVQ-EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E A NL   +V  G+  ++F YN L+D++CKG +   A  +   M    + PN VTYS 
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +ID + + G+LD AL+   EM   G+ L    YN++++ + K G    A     EM +  
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +    VTY +L+GGY  +GK ++  R++ +M    ++P++ T++TL+    + GL ++A+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++F E  +  +K + V Y+ +I+  C+ G +  A   L EMT++GI P+  +Y  +I   
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587

Query: 555 ---GRSATTECTVDDVER---DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK----- 603
              G+++  +  VD + +   +L +   +  L   C +    ++EA     ++++     
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREG--KLEEALSVCQEMVQRGVDL 645

Query: 604 ---VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
               +G L+    G  K ++R         G+ ++MH   +KP+ V ++++++A S+   
Sbjct: 646 DLVCYGVLI---DGSLKHKDR-----KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697

Query: 661 FEDA 664
           F++A
Sbjct: 698 FKEA 701



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 232/516 (44%), Gaps = 56/516 (10%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            S+++  L + GK++ A N+ +  ++ G    ++ ++ALI +  +     EA  +F+ M 
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394

Query: 256 RYNLKPNLVTYNAVIDA-CGKGGVD--FKHVVEIFD------------------------ 288
           +  L+PN VTY+ +ID  C +G +D     + E+ D                        
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454

Query: 289 -------DMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
                  +M+   ++P  +T+ SL+   CS+G + +A R L++EM  +GI   I+T+ TL
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR-LYHEMTGKGIAPSIYTFTTL 513

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           L  + +   +  A ++  EM   N+ PN VTY+ MI+GY + G +  A     EM   GI
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D  SY  ++      G+  EA +    +       + + Y  LL G+ ++GK +E   
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + ++M    V  +L+ Y  LID   K    K    + +E    GLK D V+Y+++IDA  
Sbjct: 634 VCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKS 693

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIID-----AFGRSATTECTVDDVERDLGKQK 575
           K G  + A  + D M  EG  PN VTY ++I+      F   A   C+       +  Q 
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQV 753

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIK-------VFGQLVAEKAGQGKKENRCRQEILC 628
                  + ++ + D+Q+A    N I+K        +  L+     QG+ E         
Sbjct: 754 TYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASE----- 808

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
              +  +M    + P+ +T++ ++N   R N  + A
Sbjct: 809 ---LITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 183/408 (44%), Gaps = 73/408 (17%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK++ A  ++     +G   ++Y F+ L+S   R+G  ++A+ +FN M  +N+KPN VTY
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPD--------------------------- 298
           N +I+  C +G  D     E   +M   G+ PD                           
Sbjct: 546 NVMIEGYCEEG--DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603

Query: 299 --------RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
                    I +  LL    R G  E A ++  EMV RG+D D+  Y  L+D   K    
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
            L F ++ EM  + + P+ V Y++MID  +K G   +A  ++  M   G   + V+Y  V
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723

Query: 411 LSIYAKLGRFEEALLVCKEMES-----------------------------------SGI 435
           ++   K G   EA ++C +M+                                     G+
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL 783

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +  TYN L+ G+ +QG+ +E   +  +M  D VSP+ +TY+T+I+   +    K+A++
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           ++    + G++ D V Y+ LI   C  G +  A  L +EM ++G+ PN
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 189/442 (42%), Gaps = 68/442 (15%)

Query: 231 FSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           F  LI  Y RS    + + VF  M  + +L P + T +A++     G V F+H       
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALL----HGLVKFRH------- 207

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
                                    +  A  LFN+MV  GI  D++ Y  ++ ++C+   
Sbjct: 208 -------------------------FGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  A E++A M A     N+V Y+ +IDG  K  ++ +A+ +  ++    +  D V+Y T
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    K+  FE  L +  EM            ++L+ G  K+GK +E   + +++    
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           VSPNL  Y+ LID   KG  + EA  +F    + GL+ + V YS LID  C+ G +++A+
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
           S L EM   G++ +V  YNS+I+         C   D+    G   E  N          
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLING-------HCKFGDISAAEGFMAEMIN---------- 465

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
                 +     +  +  L+     +GK     R        ++ +M    I P++ TF+
Sbjct: 466 ------KKLEPTVVTYTSLMGGYCSKGKINKALR--------LYHEMTGKGIAPSIYTFT 511

Query: 650 AILNACSRCNSFEDASMLLEEL 671
            +L+   R     DA  L  E+
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEM 533



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 6/259 (2%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R GK++ A ++ +  +  G    +  +  LI    +    +    +   M    LKP+ V
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV 683

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
            Y ++IDA  K G DFK    I+D M+  G  P+ +T+ +++    + G    A  L ++
Sbjct: 684 IYTSMIDAKSKTG-DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742

Query: 325 MVHRGIDQDIFTYNTLLDAICKG-AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           M       +  TY   LD + KG   M  A E+   +  K +  N  TY+ +I G+ + G
Sbjct: 743 MQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI-LKGLLANTATYNMLIRGFCRQG 801

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           R+++A  + + M   G+  D ++Y T+++   +    ++A+ +   M   GIR D V YN
Sbjct: 802 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861

Query: 444 ALLGGY---GKQGKYDEVR 459
            L+ G    G+ GK  E+R
Sbjct: 862 TLIHGCCVAGEMGKATELR 880


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 191/397 (48%), Gaps = 6/397 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT LL+ L     W    + FA  +++    N+       +I    R G V+ A  + E 
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNE--VTFDMLIRFFCRGGMVERAIQVLEQ 308

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G        + +I++  + G   +A  + N M  Y   P+ ++Y  V+    +   
Sbjct: 309 MTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAE- 367

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            +    E+ ++M+RN   P+ +TFN+ + +  + GL E A  L  +M   G    + TYN
Sbjct: 368 RWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYN 427

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L++  C    +D A E+   MP K   PN +TY+T++ G   A RLD A  + +EM   
Sbjct: 428 ALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRG 484

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
               + V++N ++S + + G  EEA+ + ++M   G   + +TYN LL G  K    ++ 
Sbjct: 485 DCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDA 544

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +   + +  VSP+++T+S++I + SK    +EA+Q+F   +  G++   V+Y+ ++  
Sbjct: 545 LELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLG 604

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           LCK   +++A+     M   G  PN  TY  +I+   
Sbjct: 605 LCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLA 641



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 238/488 (48%), Gaps = 25/488 (5%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L + +I  L R G+   A  +   A   G    V+A++ L++ Y R G+   A  +  SM
Sbjct: 78  LCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM 137

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
               + P+  TY  +I   C +G V     + + DDMLR G QP+ +T+  LL    R  
Sbjct: 138 P---VAPDAYTYTPLIRVLCDRGRV--ADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNS 192

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            +E A  + +EM  +G   +I TYN +++ +C+  ++D A E++  +P+    P+ V+Y+
Sbjct: 193 GFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYT 252

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T++ G   + R DD   +F+EM       + V+++ ++  + + G  E A+ V ++M   
Sbjct: 253 TLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEH 312

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G   +    N ++    KQG+ D+  ++   M +   +P+ ++Y+T++    +   + +A
Sbjct: 313 GCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDA 372

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            ++  E  +     + V ++  I  LC+ GL+E A+ L+++M++ G    VVTYN++++ 
Sbjct: 373 KELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNG 432

Query: 554 FGRSATTECTVDDVERDLGKQKESAN----LDAMCSQDDKD-----VQEAGRTDNQI-IK 603
           F      +  + ++ R +  +  +      L  +C+ +  D     V E  R D    + 
Sbjct: 433 FCVQGHIDSAL-ELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVV 491

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
            F  LV+    +G  E          + + ++M +    PN++T++ +L+  ++  S ED
Sbjct: 492 TFNVLVSFFCQKGFLEE--------AIELVEQMMEHGCTPNLITYNTLLDGITKDCSSED 543

Query: 664 ASMLLEEL 671
           A  LL  L
Sbjct: 544 ALELLHGL 551



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 214/451 (47%), Gaps = 70/451 (15%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I +L   G+V  A ++ +  L  G    V  ++ L+ A  R+   ++A++V + M+ 
Sbjct: 147 TPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRA 206

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVD---------------------------------FKH 282
               PN+VTYN +I+  C +G VD                                 +  
Sbjct: 207 KGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDD 266

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           V E+F +M+     P+ +TF+ L+    RGG+ E A  +  +M   G   +    N +++
Sbjct: 267 VEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVIN 326

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           +ICK  ++D AF+++ +M +   +P+ ++Y+T++ G  +A R DDA  + +EM       
Sbjct: 327 SICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPP 386

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           + V++NT + I  + G  E+A+++ ++M   G     VTYNAL+ G+  QG  D    +F
Sbjct: 387 NEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELF 446

Query: 463 ---------------------------------EQMKADCVSPNLLTYSTLIDVYSKGGL 489
                                            E ++ DC  PN++T++ L+  + + G 
Sbjct: 447 RSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDC-PPNVVTFNVLVSFFCQKGF 505

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
            +EA+++  +  + G   +++ Y+ L+D + K+   E A+ LL  +  +G+ P+V+T++S
Sbjct: 506 LEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSS 565

Query: 550 IIDAFGRSATTECTVD--DVERDLGKQKESA 578
           II    +    E  V    V +D+G + ++ 
Sbjct: 566 IIGILSKEDRIEEAVQLFHVVQDIGMRPKAV 596



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/438 (22%), Positives = 197/438 (44%), Gaps = 18/438 (4%)

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
           +G   D   +N+L+A   R G  +AAR L   M    +  D +TY  L+  +C   ++  
Sbjct: 105 SGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVAD 161

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A  ++ +M  +   PNVVTY+ +++   +    + A+ +  EM+  G   + V+YN +++
Sbjct: 162 ALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIIN 221

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              + GR ++A  +   + S G + D V+Y  LL G     ++D+V  +F +M      P
Sbjct: 222 GMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMP 281

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           N +T+  LI  + +GG+ + A+Q+  +  + G   +  L + +I+++CK G V+ A  LL
Sbjct: 282 NEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLL 341

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSA---TTECTVDDVERDLGKQKESANLDAMCSQDDK 589
           ++M   G  P+ ++Y +++    R+      +  ++++ R+     E      +C    K
Sbjct: 342 NDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQK 401

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG----VFQKMHKLKIKPNV 645
            + E      Q I +  Q+       G           C+ G      +    +  KPN 
Sbjct: 402 GLIE------QAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNT 455

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDE 703
           +T++ +L         + A+ L+ E+   D     V   +L+ +  +     +A+ L ++
Sbjct: 456 ITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQ 515

Query: 704 VKLMDSSTASAFYNALTD 721
           +     +     YN L D
Sbjct: 516 MMEHGCTPNLITYNTLLD 533



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/323 (21%), Positives = 140/323 (43%), Gaps = 39/323 (12%)

Query: 154 CGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDL 211
           C  D   YT +L+ L     W  A +     V+     N+     +  I IL + G ++ 
Sbjct: 349 CNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNE--VTFNTFICILCQKGLIEQ 406

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK---------------- 255
           A  + E     G    V  ++AL++ +   G+   A+ +F SM                 
Sbjct: 407 AIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLC 466

Query: 256 ----------------RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPD 298
                           R +  PN+VT+N ++   C KG ++    +E+ + M+ +G  P+
Sbjct: 467 NAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLE--EAIELVEQMMEHGCTPN 524

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
            IT+N+LL   ++    E A  L + +V +G+  D+ T+++++  + K  +++ A ++  
Sbjct: 525 LITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFH 584

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
            +    + P  V Y+ ++ G  K   +D+A++ F+ M   G   +  +Y  ++   A  G
Sbjct: 585 VVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEG 644

Query: 419 RFEEALLVCKEMESSGIRKDAVT 441
             +EA  +   + S G+    +T
Sbjct: 645 LLKEAQDLLSVLCSRGVLNKNLT 667


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 209/408 (51%), Gaps = 7/408 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCF-AFAVKREERKNDQGKLAS--AMISILGRLGK-VDLAKN 214
           YT LL+ L +     +A+       V  + R      + S   +I+ L R G+ +D A +
Sbjct: 165 YTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYH 224

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-C 273
           +F+  L++G    V  ++++ISA  ++    +A  V   M +    PN +T+N+++   C
Sbjct: 225 LFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYC 284

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
             G  +    + +F  M R+GV+PD  T+N+L+    + G    AR +F+ MV RG   +
Sbjct: 285 SSGKPN--DAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPN 342

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             TY TLL        +     ++  M    I P+   ++ +I  Y K G++DDA+ +FS
Sbjct: 343 SATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFS 402

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           +M+  G+  D V+Y  V+     +G+ ++A+     + S G+  DAV +  L+ G   + 
Sbjct: 403 KMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARD 462

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           K+D+   +  +M    + PN + ++TL++   K G+   A  IF    +  ++ DV+ Y+
Sbjct: 463 KWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYN 522

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            LID  C +G V+ A  LL+ M  +G++PN VTYN++I+ + ++   E
Sbjct: 523 TLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIE 570



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 182/355 (51%), Gaps = 1/355 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK + A  +F+    +G    V+ ++ L+    ++G   EA  +F+SM +   KPN  TY
Sbjct: 287 GKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATY 346

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
             ++      G   K +  + D M+RNG+QPD   FN L+   ++ G  + A  LF++M 
Sbjct: 347 GTLLHGYATEGSLVK-MHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMR 405

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +G++ D  TY  ++DA+C   ++D A      + ++ ++P+ V +  +I G     + D
Sbjct: 406 RQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWD 465

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            A  +  EM   GI  + + +NT+L+   K G    A  +   M    +++D +TYN L+
Sbjct: 466 KAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLI 525

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GY   GK DE  ++ E M  D V PN +TY+T+I+ Y K G  ++A  +FR+    G+ 
Sbjct: 526 DGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVN 585

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             +V YS ++  L +     +A  L   M K GI+ ++ TYN I+    ++  T+
Sbjct: 586 PGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTD 640



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 258/588 (43%), Gaps = 55/588 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISV-FNSMK 255
           S +I    R+G +DLA       +  G+      FS L+ A        EA+ +    M 
Sbjct: 95  SVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMP 154

Query: 256 RYNLKPNLVTYNAVIDAC-----GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVC 309
                PN+ +Y  ++         +  +   H + + DD  R G  PD +++N+++  + 
Sbjct: 155 VLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDT-RGGYPPDVVSYNTVINGLL 213

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
             G   + A +LF++M+ +G+  D+ TYN+++ A+ K   MD A  ++  M      PN 
Sbjct: 214 REGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNR 273

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           +T+++++ GY  +G+ +DA+ +F  M   G+  D  +YNT++    K GR  EA  +   
Sbjct: 274 ITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDS 333

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M   G + ++ TY  LL GY  +G   ++  + + M  + + P+   ++ LI  Y+K G 
Sbjct: 334 MVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGK 393

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
             +AM +F + ++ GL  D V Y  ++DALC  G V+ A++    +  EG+ P+ V + +
Sbjct: 394 VDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRN 453

Query: 550 IIDAFGR----SATTECTVDDVERDLGKQKESAN--LDAMCSQD-------------DKD 590
           +I             E  V+ + R +       N  L+ +C +                D
Sbjct: 454 LIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVD 513

Query: 591 VQEAGRTDNQIIKVF---------GQLVAEKAGQGKKENR----------CRQ-EILCIL 630
           VQ    T N +I  +          +L+      G K N           C+   I    
Sbjct: 514 VQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAF 573

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML----LEELRLFDNQVYGVAHGLL 686
            +F++M    + P +VT+S IL    +      A  L    ++    FD   Y +   +L
Sbjct: 574 SLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNI---IL 630

Query: 687 MGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           +G  ++N    AL +F  + L+D    +  +N + D L   G+   A+
Sbjct: 631 LGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAK 678



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 196/393 (49%), Gaps = 11/393 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK--NIF 216
           Y  L+  L   G   +A + F   VKR  + N     A+    + G   +  L K  ++ 
Sbjct: 311 YNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNS----ATYGTLLHGYATEGSLVKMHHLL 366

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
           +  +  G     Y F+ LI  Y + G   +A+ +F+ M+R  L P+ VTY  V+DA C  
Sbjct: 367 DMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMV 426

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           G VD    +  F  ++  G+ PD + F +L+  +C+R   W+ A  L  EM+ RGI  + 
Sbjct: 427 GKVD--DAMAQFGRLISEGLTPDAVVFRNLIHGLCARDK-WDKAEELAVEMIGRGICPNN 483

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
             +NTLL+ +CK   +  A  I   M   ++  +V+TY+T+IDGY   G++D+A  +   
Sbjct: 484 IFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEG 543

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G+  + V+YNT+++ Y K GR E+A  + ++M S G+    VTY+ +L G  +  +
Sbjct: 544 MVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARR 603

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
               + ++  M    +  ++ TY+ ++    +     +A++IF+         +   ++ 
Sbjct: 604 TAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNI 663

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           +IDAL K G  + A  L   +   G+ PNVVTY
Sbjct: 664 MIDALLKGGRHDEAKDLFASLLARGLVPNVVTY 696



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 205/435 (47%), Gaps = 43/435 (9%)

Query: 247 AISVFNSM---KRYNLKPNLVTYNAVIDACGK-GGVDFKHVVEIFDDMLRNGVQPDRITF 302
           AIS+F  M    R  + PNL+TY+ VID C + G +D          ++R+G   + ITF
Sbjct: 72  AISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAA--LGRVIRSGWTAEAITF 129

Query: 303 NSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           + LL A+C +    EA       M   G   ++F+Y  LL  +C   +   A  ++  M 
Sbjct: 130 SPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMM 189

Query: 362 AKNIS-----PNVVTYSTMIDGYAKAGR-LDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
             + +     P+VV+Y+T+I+G  + GR LD A ++F +M   G+  D V+YN+++S  +
Sbjct: 190 VADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALS 249

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K    ++A +V   M  +G   + +T+N+LL GY   GK ++   +F++M  D V P++ 
Sbjct: 250 KARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVF 309

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY+TL+    K G   EA +IF    + G K +   Y  L+      G +     LLD M
Sbjct: 310 TYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMM 369

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA----------NLDAMCS 585
            + GI+P+   +N +I  +    T    VDD      K +              +DA+C 
Sbjct: 370 VRNGIQPDHYIFNILIGTY----TKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCM 425

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK--- 642
                    G+ D+ + + FG+L++E         R     LC    + K  +L ++   
Sbjct: 426 --------VGKVDDAMAQ-FGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIG 476

Query: 643 ----PNVVTFSAILN 653
               PN + F+ +LN
Sbjct: 477 RGICPNNIFFNTLLN 491



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 202/459 (44%), Gaps = 49/459 (10%)

Query: 284 VEIFDDML---RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           + +F  M+   R  V P+ IT++ ++  CSR G  + A      ++  G   +  T++ L
Sbjct: 73  ISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPL 132

Query: 341 LDAICKGAQMDLAFEI-MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL- 398
           L A+C   +   A +I +  MP    +PNV +Y+ ++ G     R   AL++   M    
Sbjct: 133 LKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVAD 192

Query: 399 ----GIGLDRVSYNTVLSIYAKLGR-FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
               G   D VSYNTV++   + GR  + A  +  +M   G+  D VTYN+++    K  
Sbjct: 193 DTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKAR 252

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
             D+   +  +M  +   PN +T+++L+  Y   G   +A+ +F+   + G++ DV  Y+
Sbjct: 253 AMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYN 312

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            L+  LCKNG    A  + D M K G +PN  TY +++  +             E  L K
Sbjct: 313 TLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYA-----------TEGSLVK 361

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
                 LD M       V+   + D+ I   F  L+      GK ++         + +F
Sbjct: 362 MHHL--LDMM-------VRNGIQPDHYI---FNILIGTYTKHGKVDD--------AMLLF 401

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDA----SMLLEELRLFDNQVY-GVAHGLLMG 688
            KM +  + P+ VT+  +++A       +DA      L+ E    D  V+  + HGL   
Sbjct: 402 SKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCA- 460

Query: 689 YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
            RD  W +A  L  E+        + F+N L + L   G
Sbjct: 461 -RDK-WDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEG 497



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 186/398 (46%), Gaps = 7/398 (1%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           D Y F  L+      G+   A+    F+  R +  N        ++  L  +GKVD A  
Sbjct: 377 DHYIFNILIGTYTKHGKVDDAM--LLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMA 434

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
            F   ++EG       F  LI          +A  +   M    + PN + +N +++   
Sbjct: 435 QFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLC 494

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQD 333
           K G+       IFD M+R  VQ D IT+N+L+   C  G + EAA+ L   MV  G+  +
Sbjct: 495 KEGM-VARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAK-LLEGMVLDGVKPN 552

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             TYNT+++  CK  +++ AF +  +M +K ++P +VTYST++ G  +A R   A  ++ 
Sbjct: 553 EVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYL 612

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M   GI  D  +YN +L    +    ++AL + + +       +  T+N ++    K G
Sbjct: 613 WMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGG 672

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           ++DE + +F  + A  + PN++TY  ++    + GL +E   +F   ++ G  A+  + +
Sbjct: 673 RHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLN 732

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           AL+  L + G V  A   L ++ +        T  S++
Sbjct: 733 ALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLV 770



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 148/326 (45%), Gaps = 3/326 (0%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           L+  L  R +W KA +     + R    N+     + +++ L + G V  AKNIF+  + 
Sbjct: 454 LIHGLCARDKWDKAEELAVEMIGRGICPNNI--FFNTLLNHLCKEGMVARAKNIFDLMVR 511

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
                 V  ++ LI  Y   G   EA  +   M    +KPN VTYN +I+   K G   +
Sbjct: 512 VDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNG-RIE 570

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
               +F  M   GV P  +T++++L    +     AA+ L+  M+  GI  DI TYN +L
Sbjct: 571 DAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIIL 630

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             +C+    D A  I   +   +      T++ MID   K GR D+A ++F+ +   G+ 
Sbjct: 631 LGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLV 690

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + V+Y  ++    + G  EE   +   +E +G   ++   NAL+G   ++G+  +    
Sbjct: 691 PNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVY 750

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKG 487
             ++  +  S    T  +L+ + S G
Sbjct: 751 LSKIDENNFSLEASTAESLVLLVSSG 776


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 194/397 (48%), Gaps = 6/397 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT +L+ L     W    + FA  +++    N+       ++    R G V+ A  + E 
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVT--FDMLVRFFCRGGMVERAIQVLEQ 310

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G        + +I+   + G   +A    N+M  Y   P+ ++Y  V+    +   
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAE- 369

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            ++   E+  +M+R    P+ +TFN+ + +  + GL E A  L  +M   G + +I TYN
Sbjct: 370 RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYN 429

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L++  C   ++D A E+   MP K   PN +TY+T++ G   A RLD A  + +EM   
Sbjct: 430 ALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQK 486

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
               + V++N ++S + + G  +EA+ + ++M   G   + +TYN LL G  K    +E 
Sbjct: 487 DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEA 546

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +   + ++ VSP+++TYS++I V S+    +EA+++F   +  G++   V+Y+ ++ A
Sbjct: 547 LELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLA 606

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           LCK    + A+     M   G  PN +TY ++I+   
Sbjct: 607 LCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLA 643



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 198/394 (50%), Gaps = 10/394 (2%)

Query: 163 LRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE 222
           LR L  R + ++A +    A  R E  +    L + +I  L R G+   A  +   A   
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVY--LCTKLIRNLCRRGRTSDAARVLRAAERS 107

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G    V+A++ L++ Y R G    A  +  SM    + P+  TY  +I   C +G V   
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVG-- 162

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
             + + DDML  G QP  +T+  LL AVC   G  +A   + +EM  +G   +I TYN +
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAME-VLDEMRAKGCTPNIVTYNVI 221

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           ++ +C+  ++D A E +  + +    P+ V+Y+T++ G   A R +D   +F+EM     
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             + V+++ ++  + + G  E A+ V ++M   G   +    N ++    KQG+ D+  +
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQ 341

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
               M +   SP+ ++Y+T++    +   +++A ++ +E  +     + V ++  I  LC
Sbjct: 342 FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 401

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + GL+E A  L+++M++ G   N+VTYN++++ F
Sbjct: 402 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 130/548 (23%), Positives = 242/548 (44%), Gaps = 63/548 (11%)

Query: 160 TFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILG--RLGKVDLAKNIFE 217
           T L+R L  RG  S A    A  ++  ER      + +    + G  R G++D A+ +  
Sbjct: 82  TKLIRNLCRRGRTSDA----ARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIA 137

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
           +          Y ++ +I      G   EA+S+ + M     +P++VTY  +++A  K  
Sbjct: 138 SM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKS- 193

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             F   +E+ D+M   G  P+ +T+N ++    R G  + AR   N +   G   D  +Y
Sbjct: 194 TGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSY 253

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            T+L  +C   + +   E+ AEM  KN  PN VT+  ++  + + G ++ A+ +  +M  
Sbjct: 254 TTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSG 313

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   +    N V++   K GR ++A      M S G   D ++Y  +L G  +  ++++
Sbjct: 314 HGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 373

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            + + ++M      PN +T++T I +  + GL ++A  +  +  + G + ++V Y+AL++
Sbjct: 374 AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVN 433

Query: 518 ALCKNGLVESAVSL--------------------------------LDEMTKEGIRPNVV 545
             C  G V+SA+ L                                L EM ++   PNVV
Sbjct: 434 GFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVV 493

Query: 546 TYNSIIDAFGRSATTECTVDDVERDL--GKQKESANLDAMCSQDDKDV--QEA-----GR 596
           T+N ++  F +    +  ++ VE+ +  G        + +     KD   +EA     G 
Sbjct: 494 TFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGL 553

Query: 597 TDNQI---IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
             N +   I  +  ++    G   +E+R  + I     +F  +  L ++P  V ++ IL 
Sbjct: 554 VSNGVSPDIVTYSSII----GVLSREDRVEEAI----KMFHIVQDLGMRPKAVIYNKILL 605

Query: 654 A-CSRCNS 660
           A C RCN+
Sbjct: 606 ALCKRCNT 613



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 165/336 (49%), Gaps = 6/336 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           F  L+  + R G  + AI V   M  +    N    N VI+  C +G VD     +  ++
Sbjct: 288 FDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD--DAFQFLNN 345

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G  PD I++ ++L    R   WE A+ L  EMV +    +  T+NT +  +C+   
Sbjct: 346 MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 405

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++ A  ++ +M       N+VTY+ +++G+   GR+D AL +F  M       + ++Y T
Sbjct: 406 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTT 462

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +L+      R + A  +  EM       + VT+N L+  + ++G  DE   + EQM    
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            +PNL+TY+TL+D  +K    +EA+++       G+  D+V YS++I  L +   VE A+
Sbjct: 523 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
            +   +   G+RP  V YN I+ A  +   T+  +D
Sbjct: 583 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAID 618



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 150/304 (49%), Gaps = 6/304 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R  + + AK + +  + +        F+  I    + G  ++A  +   M  +  + N
Sbjct: 365 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVN 424

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +VTYNA+++  C +G VD    +E+F  M     +P+ IT+ +LL         +AA  L
Sbjct: 425 IVTYNALVNGFCVQGRVD--SALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAEL 479

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             EM+ +    ++ T+N L+   C+   MD A E++ +M     +PN++TY+T++DG  K
Sbjct: 480 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITK 539

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
               ++AL +   +   G+  D V+Y++++ + ++  R EEA+ +   ++  G+R  AV 
Sbjct: 540 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVI 599

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN +L    K+   D     F  M ++   PN LTY TLI+  +     KE   + RE  
Sbjct: 600 YNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELC 659

Query: 502 QAGL 505
             G+
Sbjct: 660 SRGV 663



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 151/362 (41%), Gaps = 35/362 (9%)

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
           +R  L EAAR L +    RG   D++    L+  +C+  +   A  ++        + +V
Sbjct: 55  ARDDLAEAAR-LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDV 113

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
             Y+T++ GY + G+LD A  + + M    +  D  +Y  ++      GR  EAL +  +
Sbjct: 114 FAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDD 170

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M   G +   VTY  LL    K   + +   + ++M+A   +PN++TY+ +I+   + G 
Sbjct: 171 MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGR 230

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
             +A +        G + D V Y+ ++  LC     E    L  EM ++   PN VT++ 
Sbjct: 231 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 290

Query: 550 IIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
           ++  F R    E  +  +E+ +     +AN   +C+     + + GR D+          
Sbjct: 291 LVRFFCRGGMVERAIQVLEQ-MSGHGCAAN-TTLCNIVINTICKQGRVDDA--------- 339

Query: 610 AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
                                     M      P+ ++++ +L    R   +EDA  LL+
Sbjct: 340 --------------------FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLK 379

Query: 670 EL 671
           E+
Sbjct: 380 EM 381


>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1285

 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 188/348 (54%), Gaps = 4/348 (1%)

Query: 225 GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG-VDFKHV 283
           G TV  F+A++  Y RSG   +   + ++M+   L+P+LV++N +I+A  K G +     
Sbjct: 60  GATVQVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSA 119

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
            ++  ++ + G++PD IT+N+L++ CS+G   + A  +F EM+      D++TYN ++  
Sbjct: 120 FDLLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSV 179

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
             +  +   A  +  E+  K   P+ VTY++++  +AK G  D    +  E+   G   D
Sbjct: 180 HGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKD 239

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            ++YNT++ +Y K+GR + AL +  EM + G   DAVTY  L+   GK  +  +  ++ E
Sbjct: 240 GITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLE 299

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M    + P L+T+S LI  Y+KGG  +EA++ F     +G+K D + Y  ++D + ++G
Sbjct: 300 EMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSG 359

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA---TTECTVDDVE 568
            +   ++L   M  +G RP+   Y  ++ A  +       E  V D+E
Sbjct: 360 DMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDME 407



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 162/653 (24%), Positives = 291/653 (44%), Gaps = 52/653 (7%)

Query: 231  FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA-VIDACGKGGVDFKHVVEIFDD 289
            + ++ISAY + G+ + A  + +   +  +  N+++    +I+A GK  +      E F  
Sbjct: 557  YESMISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTMIEAYGK--IKLWQHAENFVK 614

Query: 290  MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
             L+     DR  +N+L+   +  GL+E AR +F+ M+ +G    I + N ++ A+    +
Sbjct: 615  GLKQEPSIDRRIWNALIHAYAESGLYEHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGR 674

Query: 350  MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            +D  + I+ E+       +  T   M+D + KAG + + + +++ MK  G   +   Y +
Sbjct: 675  LDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRS 734

Query: 410  VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
            ++S+  +  R+ +  L+  EME +G   D    N LL  Y   G +D+   ++  +    
Sbjct: 735  MISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAG 794

Query: 470  VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            + PN  TY+TLI +YS+    +E   +  E  + GL   +  Y +L+ A  K  L E A 
Sbjct: 795  LEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAE 854

Query: 530  SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
             L +E+  +G R N   Y+ ++  + R A   C     E+ L   KE             
Sbjct: 855  QLFEEIRSKGYRLNRSLYHMLMKIY-RDA---CNHSKAEQLLASMKEDG----------- 899

Query: 590  DVQEAGRTDNQIIKVFGQL----VAEKAGQGKKENRCRQEILCILGVFQ----------- 634
             ++    T + ++  +G       AEK     K +      L    VF            
Sbjct: 900  -IEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFNAYLKNGDYNLG 958

Query: 635  --KMHKLK---IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY 689
              K+ ++K   +KP+   ++  + A S C    DA +LL  LR   +  + +   LL   
Sbjct: 959  ITKLLEMKADGVKPDHQVWTCFIRAASLCERTADAILLLNSLR---DCEFDLPIRLLTER 1015

Query: 690  RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA----QLVVLEG-KRRQV 744
              ++  +  +  +E+  ++ S A  F NAL D+LW F  +  A    QL V +   R  V
Sbjct: 1016 TSSLLTEVSNFLEELDALEDSAALNFVNALEDLLWAFECRATASYVFQLAVDKSIYRHNV 1075

Query: 745  WENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGH-ELPKLLSILTGWGKHSKVVG 803
            +  V  +   D   +S+GAA   +  WL  +     +G  E PK + ++TG G+++ V  
Sbjct: 1076 FRVVEKDWGADFRKLSAGAALTALTLWLDQMQDASLQGSPESPKSIVLVTGEGEYNMV-- 1133

Query: 804  DGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHD 856
              +LR+ +   L  MG+PF       GRF++    +  WL++S     L L D
Sbjct: 1134 --SLRKTIRAYLLEMGSPFLPCKTRSGRFVAKSYSLKMWLKDSAFCMDLELKD 1184



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 175/363 (48%), Gaps = 5/363 (1%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    V  ++ LISA  +     +A++VF  M     +P+L TYNA++   G+ G   + 
Sbjct: 130 GLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCG-KAQD 188

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
              +F +++  G +PD +T+NSLL   ++ G  +    +  E+V  G  +D  TYNT++ 
Sbjct: 189 AERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIH 248

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
              K  ++DLA  +  EM A   +P+ VTY+ +ID   K  R+ DA  +  EM   G+  
Sbjct: 249 MYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKP 308

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
             V+++ ++  YAK GR EEA+     M +SG++ D + Y  +L    + G   ++  ++
Sbjct: 309 TLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALY 368

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           + M  D   P+   Y  ++   +KG  Y E   + ++ +        ++ S LI A C  
Sbjct: 369 QTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVSSILIKAEC-- 426

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
             +     LL +   +G  P+  +  SI+DA+  +   E  +  ++        S NL +
Sbjct: 427 --ISQGAKLLKKACLQGHEPDSKSLLSILDAYETTGKHEEGLSLLQFIREHVPSSCNLIS 484

Query: 583 MCS 585
            CS
Sbjct: 485 ECS 487



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 189/369 (51%), Gaps = 20/369 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS   +   +D A  +FE  +       ++ ++A++S +GR G  Q+A  +F  +  
Sbjct: 139 NTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVE 198

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              KP+ VTYN+++ A  K G D   V  + ++++R G + D IT+N+++ +  + G  +
Sbjct: 199 KGFKPDAVTYNSLLYAFAKEG-DADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRLD 257

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L++EM   G   D  TY  L+D++ K  ++  A +++ EM    + P +VT+S +I
Sbjct: 258 LALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALI 317

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             YAK GR ++A+  FS M   G+  DR++Y  +L I A+ G   + + + + M + G R
Sbjct: 318 CAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDGYR 377

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC-VSPNLLTYSTLIDVYSKGGLYKEAMQ 495
            D   Y  +L    K  +YDE+  + + M+  C ++P L++ S LI    K     +  +
Sbjct: 378 PDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVS-SILI----KAECISQGAK 432

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           + ++    G + D     +++DA    G  E  +SLL     + IR +V +  ++I    
Sbjct: 433 LLKKACLQGHEPDSKSLLSILDAYETTGKHEEGLSLL-----QFIREHVPSSCNLI---- 483

Query: 556 RSATTECTV 564
               +EC++
Sbjct: 484 ----SECSI 488



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 191/426 (44%), Gaps = 29/426 (6%)

Query: 154 CG-ADDYTFLLRELGNRGEWSKAIQ----CFAFAVKRE----ERKNDQ---------GKL 195
           CG A D   + REL  +G    A+      +AFA + +    ER  ++         G  
Sbjct: 183 CGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGIT 242

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + MI + G++G++DLA  +++     G       ++ LI + G+     +A  V   M 
Sbjct: 243 YNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMA 302

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              LKP LVT++A+I A  KGG   +  V  F  M+ +GV+PDR+ +  +L + +R G  
Sbjct: 303 DAGLKPTLVTFSALICAYAKGGRR-EEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDM 361

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYST 374
                L+  M++ G   D   Y  +L A+ KG + D    ++ +M     ++P +V+ S 
Sbjct: 362 RKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVS-SI 420

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV---CKEME 431
           +I    KA  +     +  +    G   D  S  ++L  Y   G+ EE L +    +E  
Sbjct: 421 LI----KAECISQGAKLLKKACLQGHEPDSKSLLSILDAYETTGKHEEGLSLLQFIREHV 476

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            S     +     LL    K     +     + +K      +   Y  LI    +   + 
Sbjct: 477 PSSCNLISECSIMLLCKNQKIAAAMQEYSSMQMLKCGSFGQDCNLYEYLITCLEEAEFFP 536

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN-SI 550
           EA Q+F + +  G++    +Y ++I A CK G  E+A  L+DE  + GI  N+++   ++
Sbjct: 537 EASQVFSDMQFIGIEPSRKIYESMISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTM 596

Query: 551 IDAFGR 556
           I+A+G+
Sbjct: 597 IEAYGK 602



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 152/317 (47%), Gaps = 3/317 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++D    I +   + G+  +      ++ A+ ++G   E + ++N MK     PN+  Y
Sbjct: 673 GRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIY 732

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
            ++I    +    ++ V  +  +M R G +PD    N+LL + +  G ++    +++ ++
Sbjct: 733 RSMISLLCRNK-RYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSIL 791

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G++ +  TYNTL+    +  + +  F ++ EM  K ++P + +Y +++    KA   +
Sbjct: 792 EAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWE 851

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            A  +F E++  G  L+R  Y+ ++ IY       +A  +   M+  GI     T + L+
Sbjct: 852 QAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILM 911

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
             YG  G  DE  ++   +K+  +  + L YST+ + Y K G Y   +    E K  G+K
Sbjct: 912 TSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFNAYLKNGDYNLGITKLLEMKADGVK 971

Query: 507 ADVVLYSALIDA--LCK 521
            D  +++  I A  LC+
Sbjct: 972 PDHQVWTCFIRAASLCE 988



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/360 (23%), Positives = 162/360 (45%), Gaps = 1/360 (0%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           ++ +A+I      G  + A+ +F+  + +G   T+ + + ++ A    G   E   +   
Sbjct: 625 RIWNALIHAYAESGLYEHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQE 684

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           ++    K +  T   ++DA  K G D   V++I++ M   G  P+   + S++++  R  
Sbjct: 685 LQDMGFKISKSTVILMLDAFTKAG-DIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNK 743

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            +     +  EM   G + D+   NTLL         D   E+   +    + PN  TY+
Sbjct: 744 RYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYN 803

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+I  Y++  R ++   + +EM   G+     SY ++L+   K   +E+A  + +E+ S 
Sbjct: 804 TLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSK 863

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G R +   Y+ L+  Y     + +  ++   MK D + P + T   L+  Y   G   EA
Sbjct: 864 GYRLNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEA 923

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            ++    K + L+   + YS + +A  KNG     ++ L EM  +G++P+   +   I A
Sbjct: 924 EKVLNSLKSSSLEVSTLPYSTVFNAYLKNGDYNLGITKLLEMKADGVKPDHQVWTCFIRA 983



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/399 (21%), Positives = 178/399 (44%), Gaps = 49/399 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  LG++ ++  A  + E   + G   T+  FSALI AY + G  +EA+  F+ M  
Sbjct: 279 TVLIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVA 338

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +KP+ + Y  ++D   + G D + ++ ++  M+ +G +PD   +  +LA  ++G  ++
Sbjct: 339 SGVKPDRLAYLVMLDIIARSG-DMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYD 397

Query: 317 AARNLFNEM--VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
               +  +M  V +   Q + +     + I +GA++      + +   +   P+  +  +
Sbjct: 398 EIEAVVQDMEVVCQMNPQLVSSILIKAECISQGAKL------LKKACLQGHEPDSKSLLS 451

Query: 375 MIDGYAKAGRLDDALNM-----------------------------------FSEMKFL- 398
           ++D Y   G+ ++ L++                                   +S M+ L 
Sbjct: 452 ILDAYETTGKHEEGLSLLQFIREHVPSSCNLISECSIMLLCKNQKIAAAMQEYSSMQMLK 511

Query: 399 --GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
               G D   Y  +++   +   F EA  V  +M+  GI      Y +++  Y K G  +
Sbjct: 512 CGSFGQDCNLYEYLITCLEEAEFFPEASQVFSDMQFIGIEPSRKIYESMISAYCKLGFPE 571

Query: 457 EVRRMFEQMKADCVSPNLLTYS-TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
              ++ ++     +S N+L+   T+I+ Y K  L++ A    +  KQ     D  +++AL
Sbjct: 572 TAHQLMDEAVQSGISLNILSSRVTMIEAYGKIKLWQHAENFVKGLKQEP-SIDRRIWNAL 630

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           I A  ++GL E A ++ D M ++G  P + + N ++ A 
Sbjct: 631 IHAYAESGLYEHARAVFDIMIEKGPLPTIDSVNGMMRAL 669



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 128/252 (50%), Gaps = 36/252 (14%)

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK--EAMQIFR 498
            +NA++G Y + G++D+VR++ + M+   + P+L++++TLI+  +K G      A  +  
Sbjct: 65  VFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDLLL 124

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E +Q GL+ DV+ Y+ LI A  +   ++ AV++ +EM     RP++ TYN+++   GR  
Sbjct: 125 EVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCG 184

Query: 559 TTE------------------CTVDDVERDLGKQKESANLDAMCSQDDK-DVQEAGRTDN 599
             +                   T + +     K+ ++  ++ +C +  +   ++ G T N
Sbjct: 185 KAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYN 244

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
            +I ++G++       G+ +          LG++ +M  L   P+ VT++ ++++  + +
Sbjct: 245 TMIHMYGKM-------GRLD--------LALGLYDEMRALGCTPDAVTYTVLIDSLGKMD 289

Query: 660 SFEDASMLLEEL 671
              DA  +LEE+
Sbjct: 290 RISDAGKVLEEM 301


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 212/418 (50%), Gaps = 12/418 (2%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++ +L   G+V+ A+ +F+   +      V  +  LI  Y   G  + A+ + + M    
Sbjct: 268 LLKVLCGAGRVEDARQLFDEMASPP---DVVTYGILIHGYCALGELENAVKLLDDMVARG 324

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWE 316
           ++PN   Y +V+   C KG V     + + +DM+ + V  D   + ++L+  C++G L  
Sbjct: 325 VEPNATVYTSVVALLCDKGRV--SDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLV- 381

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +AR  F+EM  +G+  D  TY TL++ +C+  ++  A +++ EM A+ +  + VTY+ ++
Sbjct: 382 SARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLV 441

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DGY K G++ +A  + + M   G+  + V+Y  +     K G  + A  +  EM + G+ 
Sbjct: 442 DGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLE 501

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +A TYN+L+ G  K G  D+  R    M A  + P++ TY+TLID   K G    A  +
Sbjct: 502 LNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDL 561

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF-- 554
            +E    G+K  +V Y+ L++  C +G VE    LL+ M ++ I PN  TYNS++  +  
Sbjct: 562 LQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCI 621

Query: 555 --GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
                +TTE       R++   + + N+        + ++EA    N++I+   +L A
Sbjct: 622 GNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTA 679



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 185/362 (51%), Gaps = 11/362 (3%)

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           ++L RL  +D A  +F+   ++     V +++ L+     +G  ++A  +F+ M      
Sbjct: 240 AVLSRL-PLDEAIELFQGLPDKN----VCSYNILLKVLCGAGRVEDARQLFDEMAS---P 291

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           P++VTY  +I   C  G  + ++ V++ DDM+  GV+P+   + S++A+    G    A 
Sbjct: 292 PDVVTYGILIHGYCALG--ELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDAL 349

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            +  +MVH  +  D   Y T+L   C    +  A     EM  K ++ + VTY+T+I+G 
Sbjct: 350 TVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGL 409

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            +AG L +A  +  EM    + +D V+Y  ++  Y K G+  EA  V   M   G+  + 
Sbjct: 410 CRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNV 469

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           VTY AL  G  KQG       +  +M    +  N  TY++LI+   K G   +AM+   +
Sbjct: 470 VTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMAD 529

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
              AGLK DV  Y+ LIDALCK+G ++ A  LL EM   GI+P +VTYN +++ F  S  
Sbjct: 530 MDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGR 589

Query: 560 TE 561
            E
Sbjct: 590 VE 591



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 207/457 (45%), Gaps = 61/457 (13%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           E Y +T  AFS+  +++     C  +  +   +++Y + P+    NAV+       +   
Sbjct: 194 EHYISTYKAFSSDPASFDLLLLCLPSAPLLRRVRQYGISPSPEACNAVLSR-----LPLD 248

Query: 282 HVVEIFDDMLRNGVQPDR--ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
             +E+F  +      PD+   ++N LL V    G  E AR LF+EM       D+ TY  
Sbjct: 249 EAIELFQGL------PDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGI 299

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+   C   +++ A +++ +M A+ + PN   Y++++      GR+ DAL +  +M    
Sbjct: 300 LIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHK 359

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           + LD   Y TVLS +   G    A     EM+  G+  D VTY  L+ G  + G+  E  
Sbjct: 360 VILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAE 419

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++ ++M A  +  + +TY+ L+D Y K G   EA Q+     Q G+  +VV Y+AL D L
Sbjct: 420 KVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGL 479

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
           CK G V++A  LL EM+ +G+  N  TYNS+I+   ++      +D   R +      A+
Sbjct: 480 CKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAG----YLDQAMRTM------AD 529

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
           +DA   + D             +  +  L+               + LC  G   + H L
Sbjct: 530 MDAAGLKPD-------------VYTYTTLI---------------DALCKSGELDRAHDL 561

Query: 640 -------KIKPNVVTFSAILNACSRCNSFEDASMLLE 669
                   IKP +VT++ ++N        E    LLE
Sbjct: 562 LQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLE 598



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 192/394 (48%), Gaps = 5/394 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+      GE   A++     V R    N    + ++++++L   G+V  A  + E 
Sbjct: 297 YGILIHGYCALGELENAVKLLDDMVARGVEPN--ATVYTSVVALLCDKGRVSDALTVVED 354

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            ++         ++ ++S +   G    A   F+ M+R  L  + VTY  +I+   + G 
Sbjct: 355 MVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAG- 413

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           + K   ++  +ML   +  D +T+  L+   C RG + EA + + N MV RG+  ++ TY
Sbjct: 414 ELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQ-VHNTMVQRGVAPNVVTY 472

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             L D +CK   +  A E++ EM  K +  N  TY+++I+G  KAG LD A+   ++M  
Sbjct: 473 TALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDA 532

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  D  +Y T++    K G  + A  + +EM  +GI+   VTYN L+ G+   G+ + 
Sbjct: 533 AGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEG 592

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            +++ E M    + PN  TY++L+  Y  G   K   +I++      ++ +   Y+ LI 
Sbjct: 593 GKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIK 652

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             CK   ++ A    +EM ++G R    +Y+++I
Sbjct: 653 GHCKARSMKEAQYFHNEMIEKGFRLTASSYSALI 686



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 186/394 (47%), Gaps = 3/394 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT ++  L ++G  S A+      V  +   ++   + + ++S     G +  A+  F+ 
Sbjct: 332 YTSVVALLCDKGRVSDALTVVEDMVHHKVILDEA--VYTTVLSGFCNKGDLVSARRWFDE 389

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G       ++ LI+   R+G  +EA  V   M    L  + VTY  ++D   K G 
Sbjct: 390 MQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRG- 448

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                 ++ + M++ GV P+ +T+ +L     + G  +AA  L +EM ++G++ +  TYN
Sbjct: 449 KMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYN 508

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L++ +CK   +D A   MA+M A  + P+V TY+T+ID   K+G LD A ++  EM   
Sbjct: 509 SLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDN 568

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI    V+YN +++ +   GR E    + + M    I  +A TYN+L+  Y         
Sbjct: 569 GIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKST 628

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +++ M +  V PN  TY+ LI  + K    KEA     E  + G +     YSALI  
Sbjct: 629 TEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRL 688

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           L K      A  L  +M KEG       YN  ID
Sbjct: 689 LNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID 722



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 186/382 (48%), Gaps = 3/382 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT +L    N+G+   A + F   ++R+    D G   + +I+ L R G++  A+ + + 
Sbjct: 367 YTTVLSGFCNKGDLVSARRWFD-EMQRKGLATD-GVTYTTLINGLCRAGELKEAEKVLQE 424

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L          ++ L+  Y + G   EA  V N+M +  + PN+VTY A+ D   K G 
Sbjct: 425 MLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQG- 483

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           D +   E+  +M   G++ +  T+NSL+    + G  + A     +M   G+  D++TY 
Sbjct: 484 DVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYT 543

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+DA+CK  ++D A +++ EM    I P +VTY+ +++G+  +GR++    +   M   
Sbjct: 544 TLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEK 603

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            I  +  +YN+++  Y      +    + K M S  +  +  TYN L+ G+ K     E 
Sbjct: 604 NIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEA 663

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
           +    +M          +YS LI + +K   + EA ++F + ++ G  A+  +Y+  ID 
Sbjct: 664 QYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDF 723

Query: 519 LCKNGLVESAVSLLDEMTKEGI 540
                 +E+ ++L DE+ +  I
Sbjct: 724 NFNEDNLEATLALCDELVEASI 745



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 157/380 (41%), Gaps = 91/380 (23%)

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM------ 395
           +A+     +D A E+   +P KN    V +Y+ ++     AGR++DA  +F EM      
Sbjct: 239 NAVLSRLPLDEAIELFQGLPDKN----VCSYNILLKVLCGAGRVEDARQLFDEMASPPDV 294

Query: 396 --------------------KFL------GIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
                               K L      G+  +   Y +V+++    GR  +AL V ++
Sbjct: 295 VTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVED 354

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M    +  D   Y  +L G+  +G     RR F++M+   ++ + +TY+TLI+   + G 
Sbjct: 355 MVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGE 414

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
            KEA ++ +E     L  D V Y+ L+D  CK G +  A  + + M + G+ PNVVTY +
Sbjct: 415 LKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTA 474

Query: 550 IIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
           +                              D +C Q D             ++   +L+
Sbjct: 475 LS-----------------------------DGLCKQGD-------------VQAANELL 492

Query: 610 AEKAGQGKKENRCRQEI----LCILGVFQK-------MHKLKIKPNVVTFSAILNACSRC 658
            E + +G + N C        LC  G   +       M    +KP+V T++ +++A  + 
Sbjct: 493 HEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKS 552

Query: 659 NSFEDASMLLEELRLFDNQV 678
              + A  LL+E  + DN +
Sbjct: 553 GELDRAHDLLQE--MLDNGI 570


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 235/496 (47%), Gaps = 46/496 (9%)

Query: 202 ILGRLGKVD---LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           I+G L K+     A ++F+    +G    ++  + LI+ +   G    + +V   + +  
Sbjct: 16  IVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLG 75

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            +PN +T N ++   C KG V  K  +   D ++  G Q D++++ +LL    + G   +
Sbjct: 76  YQPNTITLNTLMKGLCLKGEV--KKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRS 133

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  L   +  R    ++  YNT++D +CK   ++ A+++ +EM A+ I PNV+TYST+I 
Sbjct: 134 ALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIY 193

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+  AG+L +A  + +EM    I  +  +Y  ++    K G+ +EA  +   M   G++ 
Sbjct: 194 GFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKP 253

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + V+YN L+ GY   G+    ++MF  M    V+PN+ +Y+ +ID   K     EAM + 
Sbjct: 254 NVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLL 313

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           RE     +  + V YS+LID  CK G + SA+ LL EM   G   +VVTY S++DA  ++
Sbjct: 314 REVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKN 373

Query: 558 AT----TECTVDDVERDL--GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
                 T   +   ER +   K   +A +D +C        + GR  N          A+
Sbjct: 374 QNLDKATALFMKMKERGIQPNKYTYTALIDGLC--------KGGRHKN----------AQ 415

Query: 612 KAGQGKKENRCRQEI---------LCILGVFQKMHKLKIK-------PNVVTFSAILNAC 655
           K  Q      CR  +         LC  G+  +   +K K       P+ VTF  I+ + 
Sbjct: 416 KLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSL 475

Query: 656 SRCNSFEDASMLLEEL 671
              +  + A  LL E+
Sbjct: 476 FEKDQNDKAEKLLHEM 491



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 203/394 (51%), Gaps = 5/394 (1%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           L++ L  +GE  K++  F   V  +  + DQ   A+ +++ L ++G+   A  +     +
Sbjct: 86  LMKGLCLKGEVKKSLH-FHDKVVAQGFQMDQVSYAT-LLNGLCKIGETRSALKLLRMIED 143

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
                 V  ++ +I    +     EA  +++ M    + PN++TY+ +I      G    
Sbjct: 144 RSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAG-QLM 202

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
               + ++M+   + P+  T+  L+ A+C  G + E A+NL   M   G+  ++ +YNTL
Sbjct: 203 EAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKE-AKNLLAVMTKEGVKPNVVSYNTL 261

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +D  C   ++  A ++   M  K ++PNV +Y+ MID   K+ R+D+A+N+  E+    +
Sbjct: 262 MDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNM 321

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             + V+Y++++  + KLGR   AL + KEM   G   D VTY +LL    K    D+   
Sbjct: 322 VPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATA 381

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F +MK   + PN  TY+ LID   KGG +K A ++F+     G + +V  Y+ +I  LC
Sbjct: 382 LFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLC 441

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           K G+++ A+++  +M + G  P+ VT+  II + 
Sbjct: 442 KEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSL 475



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 217/455 (47%), Gaps = 37/455 (8%)

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           P  + FN ++    +   +  A +LF +M  +GI+ D+FT N L++  C   QM  +F +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           + ++      PN +T +T++ G    G +  +L+   ++   G  +D+VSY T+L+   K
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
           +G    AL + + +E    R + V YN ++ G  K    +E   ++ +M A  + PN++T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           YSTLI  +   G   EA  +  E     +  +V  Y+ L+DALCK G V+ A +LL  MT
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
           KEG++PNVV+YN+++D +       C + +V+    KQ          +   K V     
Sbjct: 248 KEGVKPNVVSYNTLMDGY-------CLIGEVQN--AKQ-------MFHTMVQKGVNPNVY 291

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
           + N +I        ++  + K+ +     +  +L      HK  + PN VT+S++++   
Sbjct: 292 SYNIMI--------DRLCKSKRVDEAMNLLREVL------HK-NMVPNTVTYSSLIDGFC 336

Query: 657 RCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASA 714
           +      A  LL+E+         V +  L+    ++    +A +LF ++K         
Sbjct: 337 KLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKY 396

Query: 715 FYNALTDMLWHFGQKRGAQL----VVLEGKRRQVW 745
            Y AL D L   G+ + AQ     ++++G R  VW
Sbjct: 397 TYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVW 431



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 144/272 (52%), Gaps = 3/272 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++  L + GKV  AKN+      EG    V +++ L+  Y   G  Q A  +F++M +
Sbjct: 224 TILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQ 283

Query: 257 YNLKPNLVTYNAVID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + PN+ +YN +ID  C    VD    + +  ++L   + P+ +T++SL+    + G  
Sbjct: 284 KGVNPNVYSYNIMIDRLCKSKRVD--EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRI 341

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            +A +L  EM HRG   D+ TY +LLDA+CK   +D A  +  +M  + I PN  TY+ +
Sbjct: 342 TSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTAL 401

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K GR  +A  +F  +   G  ++  +YN ++S   K G  +EAL +  +ME +G 
Sbjct: 402 IDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGC 461

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
             DAVT+  ++    ++ + D+  ++  +M A
Sbjct: 462 IPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIA 493



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 185/413 (44%), Gaps = 42/413 (10%)

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           +P ++ ++ ++    K      A+++F +M+  GI  D  + N +++ +  LG+   +  
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           V  ++   G + + +T N L+ G   +G+  +     +++ A     + ++Y+TL++   
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G  + A+++ R  +    + +VV+Y+ +ID LCK+ LV  A  L  EM   GI PNV+
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 546 TYNSII----------DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
           TY+++I          +AFG     E  + ++  ++     +  +DA+C +    V+EA 
Sbjct: 187 TYSTLIYGFCLAGQLMEAFG--LLNEMILKNINPNV--YTYTILMDALCKEG--KVKEA- 239

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL----CILG-------VFQKMHKLKIKPN 644
                       L+A    +G K N      L    C++G       +F  M +  + PN
Sbjct: 240 ----------KNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPN 289

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA--HGLLMGY-RDNIWVQALSLF 701
           V +++ +++   +    ++A  LL E+ L  N V        L+ G+ +      AL L 
Sbjct: 290 VYSYNIMIDRLCKSKRVDEAMNLLREV-LHKNMVPNTVTYSSLIDGFCKLGRITSALDLL 348

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
            E+           Y +L D L        A  + ++ K R +  N ++ + L
Sbjct: 349 KEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTAL 401



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 90/169 (53%), Gaps = 1/169 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++I    +LG++  A ++ +   + G    V  +++L+ A  ++    +A ++F  MK 
Sbjct: 329 SSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 388

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++PN  TY A+ID   KGG   K+  ++F  +L  G + +  T+N +++   + G+ +
Sbjct: 389 RGIQPNKYTYTALIDGLCKGG-RHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLD 447

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
            A  + ++M   G   D  T+  ++ ++ +  Q D A +++ EM AK++
Sbjct: 448 EALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDL 496


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 197/389 (50%), Gaps = 13/389 (3%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
           G  S AIQCF    K   +    G     ++  + ++    +A   +   L+ GY   VY
Sbjct: 176 GYVSDAIQCFRLTKKHNLKIPFNG--CKCLLERMIKMSSPMVALEFYLEILDSGYPPNVY 233

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKG----GVDFKHVV 284
            F+ L++   + G  ++A  +F+ +++  L+P  V++N +I+  C  G    G   K V+
Sbjct: 234 TFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVM 293

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           E F       V PD  T+++L+    +    E A +LF EM  RG+  +  T+ TL++  
Sbjct: 294 EEFR------VFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQ 347

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK  ++DLA EI  +M  K +  ++V Y+T+IDG  K G   +A     EM   G+  D+
Sbjct: 348 CKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDK 407

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +Y T+L    K G  E AL + KEM   GI+ D V + A++ G  + GK  +  R   +
Sbjct: 408 FTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLRE 467

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    + P+  TY+ ++D + K G  K   ++ +E +  G    V+ Y+ L++ LCK G 
Sbjct: 468 MLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQ 527

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           V++A  LL+ M   G+ P+ +TYN ++  
Sbjct: 528 VKNADMLLNAMLNLGVVPDDITYNILLQG 556



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 199/372 (53%), Gaps = 5/372 (1%)

Query: 188 RKNDQGKLASAMISILGRLGKVDLAKNIFETAL-NEGYGNTVYAFSALISAYGRSGYCQE 246
           R N Q +  S +  ++ R GK   A ++F + L  +G  ++ + F AL+S Y   GY  +
Sbjct: 124 RMNQQAE--SLLHFVVSRKGKGS-ASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSD 180

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL 306
           AI  F   K++NLK        +++   K        +E + ++L +G  P+  TFN L+
Sbjct: 181 AIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMV-ALEFYLEILDSGYPPNVYTFNVLM 239

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
               + G  + A+ +F+E+   G+     ++NTL++  CK   ++  F +   M    + 
Sbjct: 240 NRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVF 299

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P+V TYS +IDG  K  +L+DA ++F EM   G+  + V++ T+++   K GR + AL +
Sbjct: 300 PDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEI 359

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            ++M + G++ D V YN L+ G  K G + E R+   +M    + P+  TY+TL+D   K
Sbjct: 360 YQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCK 419

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G  + A+++ +E  + G++ D V ++A+I  LC++G +  A   L EM + G++P+  T
Sbjct: 420 EGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGT 479

Query: 547 YNSIIDAFGRSA 558
           Y  ++D F +  
Sbjct: 480 YTMVMDGFCKKG 491



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 195/418 (46%), Gaps = 30/418 (7%)

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           V+   GKG         +F  +L   G       F++L++V +  G    A   F     
Sbjct: 136 VVSRKGKGSAS-----SVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKK 190

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
             +         LL+ + K +   +A E   E+      PNV T++ +++   K G++ D
Sbjct: 191 HNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKD 250

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +F E++  G+    VS+NT+++ Y K G  EE   +   ME   +  D  TY+AL+ 
Sbjct: 251 AQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALID 310

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           G  K+ + ++   +F++M    + PN +T++TLI+   K G    A++I+++    GLKA
Sbjct: 311 GLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKA 370

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           D+VLY+ LID LCK G    A   + EMTK G+ P+  TY +++D         C   D+
Sbjct: 371 DLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDG-------SCKEGDL 423

Query: 568 ERDLGKQKE-------------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
           E  L  +KE             +A +  +C   D  + +A RT  ++++  G    +   
Sbjct: 424 ELALEMRKEMVKEGIQLDNVAFTAIISGLCR--DGKIVDAERTLREMLRA-GLKPDDGTY 480

Query: 615 QGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               +  C++ ++     + ++M      P V+T++ ++N   +    ++A MLL  +
Sbjct: 481 TMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAM 538


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 193/369 (52%), Gaps = 17/369 (4%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS----------------G 242
           +I+ L + G+VD A  +F   L +G+   +  ++++I    ++                G
Sbjct: 145 VINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKG 204

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
             +EA+ +   M    L+P++VTY+ +ID   K G        IFD M+R G  PD  T+
Sbjct: 205 QLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIG-RCTEARNIFDSMVRRGQNPDAYTY 263

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
            +LL   +  G      +L   M+  GI  +   +N L+ A  K   +D A     EM  
Sbjct: 264 RTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQ 323

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
           K  SPNVVTY+T+ID   KAGR++DA++ FS+M   G+  D +++ +++     +G +++
Sbjct: 324 KGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKK 383

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
              +  EM + GI  +A+  N ++    K+G+  E    F+Q+    V P++++Y+ LID
Sbjct: 384 VEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILID 443

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            Y   G   E++++       GL+ D V YSAL++  CKNG V+ A++L  EM  + ++P
Sbjct: 444 GYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKP 503

Query: 543 NVVTYNSII 551
           N +TYN I+
Sbjct: 504 NAITYNIIL 512



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 194/372 (52%), Gaps = 7/372 (1%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           + F+ LI AY ++    +A++ F  M++    PN+VTY  VID   K G   +  V  F 
Sbjct: 296 HVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAG-RVEDAVSHFS 354

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M+  G+ PD ITF SL+      G W+    L  EM++RGI  +    NT++D++CK  
Sbjct: 355 QMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEG 414

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++  A +   ++    + P+VV+Y+ +IDGY   G++D+++ +   M  +G+  D V+Y+
Sbjct: 415 RVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYS 474

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +L+ Y K GR ++AL + +EM S  ++ +A+TYN +L G    G+    R  + ++   
Sbjct: 475 ALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDS 534

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            +   + TY+ ++    +     EA+++F+  +    + +V  ++ +I  L K G +  A
Sbjct: 535 GIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDA 594

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN---LDAMCS 585
            SL   +   G+ P+ + Y  +I +       E + D++   + K   +AN   L+A+  
Sbjct: 595 KSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEES-DELFLSMEKNGCTANSRTLNAIVR 653

Query: 586 Q--DDKDVQEAG 595
           +  +  DV+ AG
Sbjct: 654 KLLEKGDVRRAG 665



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 182/345 (52%), Gaps = 5/345 (1%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           +D A   F     +G+   V  ++ +I    ++G  ++A+S F+ M    L P+++T+ +
Sbjct: 311 LDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTS 370

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           +I   C  G  ++K V ++  +M+  G+ P+ I  N+++ ++C  G + EA  + F++++
Sbjct: 371 LIHGLCTIG--EWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEA-HDFFDQII 427

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
           H G+  D+ +Y  L+D  C   +MD + +++  M +  + P+ VTYS +++GY K GR+D
Sbjct: 428 HVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVD 487

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           DAL ++ EM    +  + ++YN +L      GR   A     ++  SGI+    TYN +L
Sbjct: 488 DALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVL 547

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
           GG  +    DE  RMF+ +++      + T++ +I    K G   +A  +F     +GL 
Sbjct: 548 GGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLV 607

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            D ++Y  +I +  + GL+E +  L   M K G   N  T N+I+
Sbjct: 608 PDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIV 652



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 233/518 (44%), Gaps = 97/518 (18%)

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALIS--AYGRSGYCQE-----AISVFNSMKR 256
           G LG  D A N+F+  L      +V+AF+ +++  A+G S   Q      A+S+FN+M +
Sbjct: 26  GSLGLED-ALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQ 84

Query: 257 Y---NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
                L  +  T+  +I   C  G +DF    E                        SRG
Sbjct: 85  VGVNKLATDACTFGILIRCFCNVGLLDFALEEE------------------------SRG 120

Query: 313 GLWEAARNLFNEMVHRGID--QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
                +R   + M   G +   ++ +YN +++ + K  ++D A+ +  EM  +   PN+V
Sbjct: 121 -----SRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIV 175

Query: 371 TYSTMIDGYAKA----------------GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY 414
           TY+++IDG  KA                G+L++A+ +  +M   G+  D V+Y+ ++  Y
Sbjct: 176 TYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYY 235

Query: 415 AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
            K+GR  EA  +   M   G   DA TY  LL GY  +G   ++  +   M  D +    
Sbjct: 236 CKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLED 295

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
             ++ LI  Y+K     +AM  F E +Q G   +VV Y+ +ID LCK G VE AVS   +
Sbjct: 296 HVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQ 355

Query: 535 MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------------LD 581
           M  EG+ P+++T+ S+I          CT+ + ++      E  N             +D
Sbjct: 356 MVSEGLSPDIITFTSLIHGL-------CTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMD 408

Query: 582 AMCSQDDKDVQEAGRTDNQIIKV--------FGQLVAEKAGQGKKENRCRQEILCILGVF 633
           ++C +    V EA    +QII V        +  L+      GK +     E + +LG  
Sbjct: 409 SLCKEGR--VLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMD-----ESIKLLG-- 459

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            +M  + ++P+ VT+SA+LN   +    +DA  L  E+
Sbjct: 460 -RMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREM 496



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 189/393 (48%), Gaps = 40/393 (10%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           A A++  +   G+++ A  + +     G    V  +S LI  Y + G C EA ++F+SM 
Sbjct: 193 AEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMV 252

Query: 256 RYNLKPNLVTYNAVIDACGKGG--VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           R    P+  TY  ++      G  VD   ++ +   M+++G+  +   FN L+   ++  
Sbjct: 253 RRGQNPDAYTYRTLLHGYATKGALVDMHDLLAL---MIQDGIPLEDHVFNILIRAYAKNE 309

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             + A   F EM  +G   ++ TY T++D +CK  +++ A    ++M ++ +SP+++T++
Sbjct: 310 TLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFT 369

Query: 374 TMI-----------------------------------DGYAKAGRLDDALNMFSEMKFL 398
           ++I                                   D   K GR+ +A + F ++  +
Sbjct: 370 SLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHV 429

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D VSY  ++  Y   G+ +E++ +   M S G+R D VTY+ALL GY K G+ D+ 
Sbjct: 430 GVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDA 489

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             ++ +M +  V PN +TY+ ++      G    A + + +   +G++  +  Y+ ++  
Sbjct: 490 LALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGG 549

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           LC+N  V+ A+ +   +  +  +  V T+N +I
Sbjct: 550 LCENSFVDEALRMFQGLRSKEFQLEVRTFNIMI 582



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 123/516 (23%), Positives = 230/516 (44%), Gaps = 60/516 (11%)

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR-------NL 321
           +++    G +  +  + +FD++L          FN +L V + G    + R       +L
Sbjct: 19  IVEQHRSGSLGLEDALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSL 78

Query: 322 FNEMVHRGIDQ---DIFTYNTLLDAICKGAQMDLAFE-----------IMAEMPAKNISP 367
           FN M   G+++   D  T+  L+   C    +D A E           +MA+    N  P
Sbjct: 79  FNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMAD-DGYNCPP 137

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL---------- 417
           NV++Y+ +I+G  K G +D A  +F EM   G   + V+YN+V+    K           
Sbjct: 138 NVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVL 197

Query: 418 ------GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
                 G+ EEA+ + K+M   G++ D VTY+ L+  Y K G+  E R +F+ M     +
Sbjct: 198 QQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQN 257

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P+  TY TL+  Y+  G   +   +     Q G+  +  +++ LI A  KN  ++ A++ 
Sbjct: 258 PDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTA 317

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE------SANLDAMCS 585
             EM ++G  PNVVTY ++ID   ++   E  V    + + +         ++ +  +C+
Sbjct: 318 FIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCT 377

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAG--QGKKENRCRQ-EILCILGVFQKMHKLKIK 642
                + E  + +    ++  + +   A       ++ C++  +L     F ++  + +K
Sbjct: 378 -----IGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVK 432

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYGVAHGLLMGYRDNIWV-QA 697
           P+VV+++ +++        +++  LL  +       DN  Y     LL GY  N  V  A
Sbjct: 433 PDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYS---ALLNGYCKNGRVDDA 489

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           L+L+ E+   D    +  YN +   L+H G+   A+
Sbjct: 490 LALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAR 525



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 188/382 (49%), Gaps = 7/382 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +  L+R         KA+   AF   R++  +      + +I IL + G+V+ A + F  
Sbjct: 298 FNILIRAYAKNETLDKAMT--AFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQ 355

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            ++EG    +  F++LI      G  ++   +   M    + PN +  N ++D+ C +G 
Sbjct: 356 MVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGR 415

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           V   H  + FD ++  GV+PD +++  L+   C  G + E+ + L   MV  G+  D  T
Sbjct: 416 VLEAH--DFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIK-LLGRMVSIGLRPDNVT 472

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y+ LL+  CK  ++D A  +  EM +K++ PN +TY+ ++ G   AGR+  A   + ++ 
Sbjct: 473 YSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIV 532

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             GI L   +YN VL    +    +EAL + + + S   + +  T+N ++ G  K G+  
Sbjct: 533 DSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIG 592

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           + + +F  +    + P+ + Y  +I  + + GL +E+ ++F   ++ G  A+    +A++
Sbjct: 593 DAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIV 652

Query: 517 DALCKNGLVESAVSLLDEMTKE 538
             L + G V  A + L ++ ++
Sbjct: 653 RKLLEKGDVRRAGTYLTKIDEK 674


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 215/440 (48%), Gaps = 19/440 (4%)

Query: 163 LRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE 222
           L  L +RG+   A++     V+   R  D   LA+ ++  L R G+ D A+ +       
Sbjct: 78  LSALVHRGDLDAALR----LVESSPRPPD-AALANRLVRDLCRRGRPDDAERVVGAC--- 129

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G   TV A+ AL   Y R+G   +A  V   M    ++PN  TYN +I   C +G V  +
Sbjct: 130 GPAATVVAYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQV--R 184

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             + + DDML  G  PD +T+N LL    +G  +  A  L + M   G   +  TYN L+
Sbjct: 185 DALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLM 244

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           D +C    +D A E++  +P+    P+ V Y+T++ G   A R  DA  + +EM      
Sbjct: 245 DGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCP 304

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            +  ++N V+    + G  ++A+ + ++M   G   + VTYNA++ G  +Q   D    +
Sbjct: 305 PNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL 364

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
             +MK+    P+++TY+TL+        + +A ++     Q G   D V ++ LI  LC+
Sbjct: 365 LSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQ 424

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-- 579
            GL+  A+ +  +M  +G  PN +TY++II    ++   +  + ++  ++G +  + +  
Sbjct: 425 KGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQAL-ELFNEMGHKGFNPDKI 483

Query: 580 --LDAMCSQDDKDVQEAGRT 597
             L A C  DD  ++EA +T
Sbjct: 484 YQLLAECLNDDDTIEEAIQT 503



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 187/392 (47%), Gaps = 35/392 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L   G+V  A ++ +  L  G    V  ++ L+ A  +    ++A+ + + M+ 
Sbjct: 171 NPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRA 230

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVD--------------------FKHVV----------- 284
               PN VTYN ++D  CG+G VD                    +  V+           
Sbjct: 231 EGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGD 290

Query: 285 --EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             E+  +MLR    P+  TFN ++    R GL + A  L  +M   G   +I TYN +++
Sbjct: 291 ADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIIN 350

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            +C+   +D A  ++++M +    P++VTY+T++ G   A +  DA  +   M   G   
Sbjct: 351 GLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLP 410

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D V++NT++    + G   +A+ V K+M   G   +++TY+ ++ G  K  K D+   +F
Sbjct: 411 DNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELF 470

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +M     +P+ + Y  L +  +     +EA+Q  R+ + +G+    VLY+A++  LC+N
Sbjct: 471 NEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRN 529

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           G  E A+ ++  M   G  P+ +TY  +I+  
Sbjct: 530 GKTEFAIDIMAYMVSSGCMPDDLTYVILIEGL 561



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 154/324 (47%), Gaps = 18/324 (5%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  +    L E        F+ +I +  R G  Q+AI +   M ++    N+VTYNA+I+
Sbjct: 291 ADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIIN 350

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
             C +  VD    + +   M   G +PD +T+N+LL        W  A  L + M   G 
Sbjct: 351 GLCEQRNVD--GAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGC 408

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             D  T+NTL+  +C+   M  A E+  +MP K  +PN +TYST+I G AKA +LD AL 
Sbjct: 409 LPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALE 468

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +F+EM   G   D++ Y  +          EEA+   ++++ SGI    V YNA+L G  
Sbjct: 469 LFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLC 527

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           + GK +    +   M +    P+ LTY  LI+  +  G   EA ++  +        DV+
Sbjct: 528 RNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL----CSRDVL 583

Query: 511 LYSALIDALCKNGLVESAVSLLDE 534
           +          N L++S   LLD+
Sbjct: 584 V----------NSLIKSEALLLDQ 597



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 37/269 (13%)

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D    N ++    + GR ++A  V   + + G     V Y AL  GY + G+  + RR+ 
Sbjct: 102 DAALANRLVRDLCRRGRPDDAERV---VGACGPAATVVAYGALTDGYCRAGRLGDARRVV 158

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
             M    V PN  TY+ LI    + G  ++A+ +  +    G   DVV Y+ L++A CK 
Sbjct: 159 GGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKG 215

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
                A+ L+D M  EG  PN VTYN ++D        E  VDD             L+ 
Sbjct: 216 RGYRQAMELIDLMRAEGCTPNNVTYNVLMDGM----CGEGDVDDA------------LEL 259

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
           + +      + +    N ++K  G   AE+ G   +             +  +M +    
Sbjct: 260 LRNLPSHGCKPSTVNYNTVLK--GLCSAERWGDADE-------------LVTEMLRENCP 304

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEEL 671
           PN  TF+ ++ +  R    + A  LLE++
Sbjct: 305 PNEATFNVVIYSLCRKGLLQQAIQLLEKM 333


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 219/448 (48%), Gaps = 46/448 (10%)

Query: 147 KKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERK---NDQGKLASAMIS 201
           K+ E K    D +TF  L+    + G  +     FAF+V  +  K   +      + +I 
Sbjct: 88  KQMELKQIQPDLFTFNILINCFCHLGHLN-----FAFSVLAKIFKLGFHPDTVTITTLIK 142

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            L   GKV  A +  +  + +G+     ++  LI+   ++G  + A+ V   +    ++P
Sbjct: 143 GLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQP 202

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           N+V YN +ID+  K  +   H  ++  +M+   + PD +T+ +L+  C   G  + A  L
Sbjct: 203 NVVMYNTIIDSLCKDKLVI-HASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGL 261

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY-- 379
           FN+M+ + I  D++T+N L+D +CK  +M  A  ++A M  + +  N+VTY++++DGY  
Sbjct: 262 FNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFL 321

Query: 380 ---------------------------------AKAGRLDDALNMFSEMKFLGIGLDRVS 406
                                             K   +D+A+N+F EM    +  + V+
Sbjct: 322 VKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVT 381

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN+++    K GR  +A  +  EM + G   D +TY++LL    K  + D+   +  ++K
Sbjct: 382 YNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIK 441

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + PN+ TY+ L+D   K G  K+A  ++++    G   DV +Y+ +++ LCK GL +
Sbjct: 442 DQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFD 501

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            A+SL+ +M   G  P+ VTY +++ A 
Sbjct: 502 EALSLVSKMEDNGCIPDAVTYETLVRAL 529



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 244/494 (49%), Gaps = 62/494 (12%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           ++ F+ ++S+  +  +   AIS    M+   ++P+L T+N +I+  C  G ++F     +
Sbjct: 64  IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNF--AFSV 121

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
              + + G  PD +T  +L+  +C  G + EA  +  ++++ +G   D  +Y TL++ +C
Sbjct: 122 LAKIFKLGFHPDTVTITTLIKGLCLNGKVREAL-HFHDDVIAKGFHLDQVSYGTLINGLC 180

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  +   A +++ ++    + PNVV Y+T+ID   K   +  A ++ SEM    I  D V
Sbjct: 181 KTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVV 240

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y T++     +GR +EA+ +  +M    I+ D  T+N L+ G  K+G+  + R +   M
Sbjct: 241 TYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVM 300

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
               V  N++TY++L+D Y       +A  +F    + G+  DV  YS +I+ LCK  +V
Sbjct: 301 IKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMV 360

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGRSATTECTVDDVERDLGKQKE----SA 578
           + AV+L  EM  + + PN VTYNS+ID    +GR +     V+++  + G+  +    S+
Sbjct: 361 DEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMH-NRGQPADVITYSS 419

Query: 579 NLDAMCS--QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
            LDA+C   Q DK +                L+ +   QG                    
Sbjct: 420 LLDALCKNHQVDKAI---------------TLITKIKDQG-------------------- 444

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL----FDNQVYGV-AHGLLMGYRD 691
               I+PN+ T++ +++   +    +DA  + ++L +     D ++Y V  +GL    ++
Sbjct: 445 ----IQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLC---KE 497

Query: 692 NIWVQALSLFDEVK 705
            ++ +ALSL  +++
Sbjct: 498 GLFDEALSLVSKME 511



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 169/312 (54%), Gaps = 1/312 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  ++ LI      G  +EA+ +FN M   N+KP++ T+N ++D   K G + K    + 
Sbjct: 239 VVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEG-EMKKARNVL 297

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
             M++ GV  + +T+NSL+           A  +FN M  RG+  D+ +Y+ +++ +CK 
Sbjct: 298 AVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKT 357

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             +D A  +  EM +K+++PN VTY+++IDG  K GR+ DA ++ +EM   G   D ++Y
Sbjct: 358 KMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITY 417

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           +++L    K  + ++A+ +  +++  GI+ +  TY  L+ G  K G+  + + +++ +  
Sbjct: 418 SSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLI 477

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
                ++  Y+ +++   K GL+ EA+ +  + +  G   D V Y  L+ AL +N   + 
Sbjct: 478 KGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDK 537

Query: 528 AVSLLDEMTKEG 539
           AV LL EM  +G
Sbjct: 538 AVKLLREMIVQG 549



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/434 (23%), Positives = 187/434 (43%), Gaps = 65/434 (14%)

Query: 322 FNEMVH-RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           FN ++H R   Q IF +N +L ++ K      A     +M  K I P++ T++ +I+ + 
Sbjct: 51  FNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFC 110

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
             G L+ A ++ +++  LG   D V+  T++      G+  EAL    ++ + G   D V
Sbjct: 111 HLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQV 170

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           +Y  L+ G  K G+     ++  ++    V PN++ Y+T+ID   K  L   A  +  E 
Sbjct: 171 SYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEM 230

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
               +  DVV Y+ LI      G ++ AV L ++M  + I+P+V T+N ++D   +    
Sbjct: 231 IVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKE--- 287

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
                      G+ K++ N+ A+  +   D      T N ++   G  +       K+EN
Sbjct: 288 -----------GEMKKARNVLAVMIKQGVDSNIV--TYNSLMD--GYFLV------KQEN 326

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG 680
           +          VF  M +  + P+V ++S ++N              L + ++ D     
Sbjct: 327 KAT-------FVFNTMARRGVTPDVQSYSIMING-------------LCKTKMVD----- 361

Query: 681 VAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGK 740
                          +A++LF E+     +  +  YN+L D L  +G+   A  +V E  
Sbjct: 362 ---------------EAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMH 406

Query: 741 RRQVWENVWSESCL 754
            R    +V + S L
Sbjct: 407 NRGQPADVITYSSL 420



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 111/228 (48%), Gaps = 6/228 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S MI+ L +   VD A N+F+   ++        +++LI    + G   +A  + N M  
Sbjct: 348 SIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHN 407

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
                +++TY++++DA C    VD    + +   +   G+QP+  T+  L+    + G  
Sbjct: 408 RGQPADVITYSSLLDALCKNHQVD--KAITLITKIKDQGIQPNIYTYTILVDGLCKNGRL 465

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A+ ++ +++ +G   D+  YN +++ +CK    D A  ++++M      P+ VTY T+
Sbjct: 466 KDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETL 525

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGL-DRVSYNTVLSIY--AKLGRF 420
           +    +  + D A+ +  EM   G  +   +S N++L +Y  A L  F
Sbjct: 526 VRALFENDKNDKAVKLLREMIVQGSAVGSNISSNSMLCVYQAAPLASF 573


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 231/462 (50%), Gaps = 21/462 (4%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDF 280
           +G    +   + LI+ +   G      SV   + +   +P+ +T+  +I   C KG V+ 
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVN- 146

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
              +   D +L  G++ D++++ +L+    + G    A  L  ++  R    ++  YNT+
Sbjct: 147 -KALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTI 205

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +DA+CK   +  A+ + +EM AK IS +VVTY+T+I G+  A +L +A+ + +EM    I
Sbjct: 206 IDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTI 265

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             +  +YN ++    K G+ +EA  V   M  + ++ D +TY+ L+ GY    +  + + 
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQH 325

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F  M    V+P++ +Y+ LI+ + K  +  EA+ +F+E  Q  +   +V YS+LID LC
Sbjct: 326 VFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC 385

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESA 578
           K+G +     L+DEM   GI  NV+TYNS+ID   ++   +  +   +  +D G +  S 
Sbjct: 386 KSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSF 445

Query: 579 N----LDAMCSQDD-KDVQEAGR---TDNQIIKVFGQLVAEKAGQGKKENRCRQEIL-CI 629
                LD +C     KD QEA +   T    + V+   V            C+Q +L   
Sbjct: 446 TFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMING-------HCKQGLLEEA 498

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           L +  KM +    PN VTF  I+NA  + +  + A  LL ++
Sbjct: 499 LTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 197/397 (49%), Gaps = 44/397 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L   G+V+ A +  +  L +G      ++  LI+   + G  + AI +   +  
Sbjct: 133 TTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDG 192

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLL-AVCSRG 312
              KPN+  YN +IDA  K    ++ V E   +F +M   G+  D +T+ +L+   C   
Sbjct: 193 RLTKPNVEMYNTIIDALCK----YQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIAS 248

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            L EA   L NEMV + I+ +++TYN L+DA+CK  ++  A  ++A M    + P+V+TY
Sbjct: 249 KLKEAI-GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITY 307

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL------- 425
           ST++DGY     L  A ++F+ M  +G+  D  SY  +++ + K    +EAL        
Sbjct: 308 STLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQ 367

Query: 426 ----------------VCK------------EMESSGIRKDAVTYNALLGGYGKQGKYDE 457
                           +CK            EM   GI  + +TYN+L+ G  K G  D 
Sbjct: 368 KNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDR 427

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +F +MK   + P   T++ L+D   KGG  K+A + F++    G   DV  Y+ +I+
Sbjct: 428 AIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMIN 487

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             CK GL+E A+++L +M + G  PN VT++ II+A 
Sbjct: 488 GHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINAL 524



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 180/348 (51%), Gaps = 3/348 (0%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           ++ + +I  L +   V  A  +F     +G    V  ++ LI  +  +   +EAI + N 
Sbjct: 200 EMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNE 259

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M    + PN+ TYN ++DA C +G V  K    +   ML+  V+PD IT+++L+      
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKV--KEAKNVLAVMLKACVKPDVITYSTLMDGYFLV 317

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              + A+++FN M   G+  D+ +Y  L++  CK   +D A  +  EM  KN+ P +VTY
Sbjct: 318 YELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           S++IDG  K+GR+    ++  EM+  GI  + ++YN+++    K G  + A+ +  +M+ 
Sbjct: 378 SSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKD 437

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            GIR  + T+  LL G  K G+  + +  F+ +       ++  Y+ +I+ + K GL +E
Sbjct: 438 QGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEE 497

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           A+ +  + ++ G   + V +  +I+AL K    + A  LL +M   G+
Sbjct: 498 ALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/459 (23%), Positives = 216/459 (47%), Gaps = 47/459 (10%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           V  F+ ML     P  I FN +L   ++   +  A +L + +  +GI  D+ T N L++ 
Sbjct: 44  VSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINC 103

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C   Q+   F ++A++  +   P+ +T++T+I G    G+++ AL+   ++   GI  D
Sbjct: 104 FCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFD 163

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
           +VSY T+++   K+G    A+ + ++++    + +   YN ++    K     E   +F 
Sbjct: 164 QVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFS 223

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M A  +S +++TY+TLI  +      KEA+ +  E     +  +V  Y+ L+DALCK G
Sbjct: 224 EMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
            V+ A ++L  M K  ++P+V+TY++++D +            +  +L K +   N  ++
Sbjct: 284 KVKEAKNVLAVMLKACVKPDVITYSTLMDGYF-----------LVYELKKAQHVFNAMSL 332

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
                 DV       N   K   ++V E                  L +F++MH+  + P
Sbjct: 333 MGV-TPDVHSYTILINGFCK--NKMVDEA-----------------LNLFKEMHQKNMVP 372

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELR---------LFDNQVYGVAHGLLMGYRDNIW 694
            +VT+S++++   +         L++E+R          +++ + G+      G+ D   
Sbjct: 373 GIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKN---GHLD--- 426

Query: 695 VQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
            +A++LF+++K       S  +  L D L   G+ + AQ
Sbjct: 427 -RAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQ 464



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 49/235 (20%), Positives = 102/235 (43%), Gaps = 30/235 (12%)

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D+    F +M     +P ++ ++ ++D ++K   Y  A+ +    +  G++ D++  + L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           I+  C  G +    S+L ++ K G +P+ +T+ ++I          C    V + L    
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGL-------CLKGQVNKALHFH- 152

Query: 576 ESANLDAMCSQDDK-DVQEAGRTDNQIIKVFG-----QLVAEKAGQGKKEN--------- 620
                D + +Q  K D    G   N + K+       +LV +  G+  K N         
Sbjct: 153 -----DKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIID 207

Query: 621 -RCRQEILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
             C+ +++    G+F +M    I  +VVT++ ++      +  ++A  LL E+ L
Sbjct: 208 ALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVL 262


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 186/366 (50%), Gaps = 1/366 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           AS ++    + G+VD A+ + +     G       +++L+  Y R         +   M+
Sbjct: 135 ASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIME 194

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              ++  + TY  ++D+    G D   V  + D+M    V  D   + +++    R G  
Sbjct: 195 NGGIEATVGTYTILVDSLSTAG-DISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNV 253

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  +F+E V  GI+ +  TY  L++  CK  QM+ A  ++A+M  + +  N + ++TM
Sbjct: 254 RRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTM 313

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDGY + G +D+AL + + M+ +GI LD  +YNT+     ++ R  EA  +   M   G+
Sbjct: 314 IDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGV 373

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + VTY  L+  + K+G   E RR+F +M      P+++TY+ ++D Y K G  +EA +
Sbjct: 374 PPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAER 433

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
             +E ++ GL  DV  Y++L+   C NG V+ A+ L +EM   G  PNVV Y ++I    
Sbjct: 434 FRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLA 493

Query: 556 RSATTE 561
           +   +E
Sbjct: 494 KEGRSE 499



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 180/342 (52%), Gaps = 1/342 (0%)

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
           + + E   N G   TV  ++ L+ +   +G   +  +V + MK  N+  ++  Y AVI+A
Sbjct: 187 QELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINA 246

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
             + G + +   E+FD+ + NG++P+  T+  L+    + G  EAA  L  +M  RG+  
Sbjct: 247 YCRAG-NVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGH 305

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           +   +NT++D  C+   +D A ++ A M    I  +V TY+T+  G  +  R+ +A  + 
Sbjct: 306 NQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLL 365

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
             M   G+  + V+Y T++SI+ K G   EA  + +EM   G     VTYN ++ GY K+
Sbjct: 366 HIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKK 425

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G   E  R  ++M+   + P++ TY++L+  +   G    A+++F E K  G + +VV Y
Sbjct: 426 GSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAY 485

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +ALI  L K G  E A  L D+M K G+ P+   Y++++ + 
Sbjct: 486 TALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 169/322 (52%), Gaps = 3/322 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++  L   G +   + + +    +     VY ++A+I+AY R+G  + A  VF+      
Sbjct: 208 LVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNG 267

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           ++PN  TY  +I+  C  G ++   +  +  DM   GV  ++I FN+++    R G+ + 
Sbjct: 268 IEPNERTYGVLINGFCKIGQMEAAEM--LLADMQGRGVGHNQIIFNTMIDGYCRQGMVDN 325

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +   M   GI+ D++TYNTL   +C+  +M  A  ++  M  K + PN VTY+T+I 
Sbjct: 326 ALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLIS 385

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            + K G + +A  +F EM   G     V+YN ++  Y K G   EA    KEME  G+  
Sbjct: 386 IHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVP 445

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  TY +L+ G+   GK D   ++FE+MK     PN++ Y+ LI   +K G  +EA Q++
Sbjct: 446 DVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLY 505

Query: 498 REFKQAGLKADVVLYSALIDAL 519
            +  +AGL  D  LYSAL+ +L
Sbjct: 506 DDMLKAGLTPDDSLYSALVGSL 527



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 192/406 (47%), Gaps = 34/406 (8%)

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           + V+D  C  G VD      + D+M R+GV+ + + +NSLL    R       + L   M
Sbjct: 136 SVVVDGFCKSGRVDDARA--LLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIM 193

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
            + GI+  + TY  L+D++     +     ++ EM AKN++ +V  Y+ +I+ Y +AG +
Sbjct: 194 ENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNV 253

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             A  +F E    GI  +  +Y  +++ + K+G+ E A ++  +M+  G+  + + +N +
Sbjct: 254 RRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTM 313

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + GY +QG  D   ++   M+   +  ++ TY+TL     +     EA  +     + G+
Sbjct: 314 IDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGV 373

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
             + V Y+ LI   CK G +  A  L  EM  +G  P+VVTYN ++D + +  +    + 
Sbjct: 374 PPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGS----IR 429

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
           + ER                   K++++ G   +  +  +  LV      GK +      
Sbjct: 430 EAERF-----------------RKEMEKKGLVPD--VYTYASLVHGHCVNGKVD------ 464

Query: 626 ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               L +F++M     +PNVV ++A+++  ++    E+A  L +++
Sbjct: 465 --VALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDM 508



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 148/300 (49%), Gaps = 7/300 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT ++      G   +A + F   V      N+  +    +I+   ++G+++ A+ +   
Sbjct: 240 YTAVINAYCRAGNVRRASEVFDECVGNGIEPNE--RTYGVLINGFCKIGQMEAAEMLLAD 297

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G G+    F+ +I  Y R G    A+ V  +M++  ++ ++ TYN +  ACG   V
Sbjct: 298 MQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTL--ACGLCRV 355

Query: 279 D-FKHVVEIFDDMLRNGVQPDRITFNSLLAV-CSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           +       +   M+  GV P+ +T+ +L+++ C  G + EA R LF EM  +G    + T
Sbjct: 356 NRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEA-RRLFREMAGKGAMPSVVT 414

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN ++D   K   +  A     EM  K + P+V TY++++ G+   G++D AL +F EMK
Sbjct: 415 YNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMK 474

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G   + V+Y  ++S  AK GR EEA  +  +M  +G+  D   Y+AL+G      + D
Sbjct: 475 HRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKD 534



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 23/182 (12%)

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE-RDL 571
           S ++D  CK+G V+ A +LLDEM + G+R N + YNS++D + R        DD   ++L
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRK------DDARVQEL 189

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL---C 628
            +  E+  ++A        V ++  T   I KV   +   KA     +      ++   C
Sbjct: 190 LEIMENGGIEATVGTYTILV-DSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYC 248

Query: 629 ILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV 681
             G       VF +     I+PN  T+  ++N   +    E A MLL      D Q  GV
Sbjct: 249 RAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLA-----DMQGRGV 303

Query: 682 AH 683
            H
Sbjct: 304 GH 305



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 72/326 (22%), Positives = 136/326 (41%), Gaps = 43/326 (13%)

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           VSP  L  S ++D + K G   +A  +  E  + G++ + + Y++L+D   +        
Sbjct: 130 VSP--LAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQ 187

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVE-RDLGKQK--ESANLDAM 583
            LL+ M   GI   V TY  ++D+    G  +  E  VD+++ +++       +A ++A 
Sbjct: 188 ELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAY 247

Query: 584 CSQDD-------------KDVQEAGRTDNQIIKVF---GQ------LVAEKAGQGKKENR 621
           C   +               ++   RT   +I  F   GQ      L+A+  G+G   N+
Sbjct: 248 CRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQ 307

Query: 622 ----------CRQEIL-CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                     CRQ ++   L V   M K+ I+ +V T++ +     R N   +A  LL  
Sbjct: 308 IIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHI 367

Query: 671 LRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           +         V +  L+    ++   V+A  LF E+    +  +   YN + D     G 
Sbjct: 368 MIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGS 427

Query: 729 KRGAQLVVLEGKRRQVWENVWSESCL 754
            R A+    E +++ +  +V++ + L
Sbjct: 428 IREAERFRKEMEKKGLVPDVYTYASL 453


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 211/444 (47%), Gaps = 53/444 (11%)

Query: 163 LRELGNRGEWSKAIQCFAFAVKREERKNDQGKL-----ASAMISILGRLGKVDLAKNIFE 217
           LR+L   GE  + ++         ER   QG +      +++I    R GK   A  I E
Sbjct: 114 LRKLVRNGELEEGLKFL-------ERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIME 166

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
              N G    V  ++ LI  Y +SG   +A+ V   ++R ++ P++VTYN ++ +    G
Sbjct: 167 ILENSGAVPDVITYNVLIGGYCKSGEIDKALQV---LERMSVAPDVVTYNTILRSLCDSG 223

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
              K  +E+ D  ++    PD IT+  L+ A C+  G+ +A + L +EM  +G   D+ T
Sbjct: 224 -KLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMK-LLDEMRKKGCKPDVVT 281

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM- 395
           YN L++ ICK  ++D A + +  MP     PNV+T++ ++      GR  DA  + ++M 
Sbjct: 282 YNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADML 341

Query: 396 ---------------------KFLGIGLD-------------RVSYNTVLSIYAKLGRFE 421
                                + LG  +D              +SYN +L  + +  + +
Sbjct: 342 RKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMD 401

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
            A+   + M S G   D VTYN LL    K GK D    +  Q+ +   SP L+TY+T+I
Sbjct: 402 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVI 461

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           D  +K G  + A ++  E ++ GLK D++ YS L+  L   G V+ A+ +  +M    I+
Sbjct: 462 DGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIK 521

Query: 542 PNVVTYNSIIDAFGRSATTECTVD 565
           P+ VTYN+I+    ++  T   +D
Sbjct: 522 PSAVTYNAIMLGLCKAQQTSRAID 545



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 217/452 (48%), Gaps = 39/452 (8%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R G+++      E  + +G    V A ++LI  + RSG  ++A  +   ++     P+
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARN 320
           ++TYN +I   C  G +D    +++ + M    V PD +T+N++L ++C  G L EA   
Sbjct: 177 VITYNVLIGGYCKSGEID--KALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEV 231

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L  +M  R    D+ TY  L++A C  + +  A +++ EM  K   P+VVTY+ +I+G  
Sbjct: 232 LDRQM-QRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 290

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K GRLD+A+   + M   G   + +++N +L      GR+ +A  +  +M   G     V
Sbjct: 291 KEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVV 350

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           T+N L+    ++        + E+M      PN L+Y+ L+  + +      A++     
Sbjct: 351 TFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 410

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
              G   D+V Y+ L+ ALCK+G  ++AV +L++++ +G  P ++TYN++ID   +   T
Sbjct: 411 VSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKT 470

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
           E   + +E                     +++  G   + I   +  L+     +GK + 
Sbjct: 471 EYAAELLE---------------------EMRRKGLKPDII--TYSTLLRGLGCEGKVDE 507

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
                    + +F  M  L IKP+ VT++AI+
Sbjct: 508 --------AIKIFHDMEGLSIKPSAVTYNAIM 531



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 177/350 (50%), Gaps = 3/350 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A  + +  +       V  ++ LI A        +A+ + + M++   KP++VTY
Sbjct: 223 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 282

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +I+  C +G +D    ++  ++M   G QP+ IT N +L      G W  A  L  +M
Sbjct: 283 NVLINGICKEGRLD--EAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADM 340

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           + +G    + T+N L++ +C+   +  A +++ +MP     PN ++Y+ ++ G+ +  ++
Sbjct: 341 LRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKM 400

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D A+     M   G   D V+YNT+L+   K G+ + A+ +  ++ S G     +TYN +
Sbjct: 401 DRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTV 460

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K GK +    + E+M+   + P+++TYSTL+      G   EA++IF + +   +
Sbjct: 461 IDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSI 520

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           K   V Y+A++  LCK      A+  L  M ++G +P   TY  +I+   
Sbjct: 521 KPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIA 570



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 174/362 (48%), Gaps = 5/362 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +LR L + G+  +A++     ++RE   +      + +I        V  A  + + 
Sbjct: 212 YNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVI--TYTILIEATCNDSGVGQAMKLLDE 269

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
              +G    V  ++ LI+   + G   EAI   N+M  Y  +PN++T+N ++ + C  G 
Sbjct: 270 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTG- 328

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             +     +  DMLR G  P  +TFN L+    R  L   A ++  +M   G   +  +Y
Sbjct: 329 -RWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSY 387

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N LL   C+  +MD A E +  M ++   P++VTY+T++    K G+ D A+ + +++  
Sbjct: 388 NPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSS 447

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G     ++YNTV+    K+G+ E A  + +EM   G++ D +TY+ LL G G +GK DE
Sbjct: 448 KGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDE 507

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             ++F  M+   + P+ +TY+ ++    K      A+       + G K     Y+ LI+
Sbjct: 508 AIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIE 567

Query: 518 AL 519
            +
Sbjct: 568 GI 569



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/378 (22%), Positives = 162/378 (42%), Gaps = 31/378 (8%)

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           R G  E        M+++G   D+    +L+   C+  +   A  IM  +      P+V+
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TY+ +I GY K+G +D AL +   M    +  D V+YNT+L      G+ +EA+ V    
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 235

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
                  D +TY  L+          +  ++ ++M+     P+++TY+ LI+   K G  
Sbjct: 236 MQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 295

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            EA++        G + +V+ ++ ++ ++C  G    A  LL +M ++G  P+VVT+N +
Sbjct: 296 DEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNIL 355

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKD---------VQEA 594
           I+   R       +D +E+ + K     N       L   C +   D         V   
Sbjct: 356 INFLCRKRLLGRAIDVLEK-MPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG 414

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
              D   I  +  L+      GK +          + +  ++      P ++T++ +++ 
Sbjct: 415 CYPD---IVTYNTLLTALCKDGKAD--------AAVEILNQLSSKGCSPVLITYNTVIDG 463

Query: 655 CSRCNSFEDASMLLEELR 672
            ++    E A+ LLEE+R
Sbjct: 464 LTKVGKTEYAAELLEEMR 481



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/306 (21%), Positives = 133/306 (43%), Gaps = 45/306 (14%)

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           + G+ +E  +  E+M      P+++  ++LI  + + G  ++A +I    + +G   DV+
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y+ LI   CK+G ++ A+ +L+ M+   + P+VVTYN+I+ +                D
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLC--------------D 221

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
            GK KE+  +       D+ +Q     D     +  +     +G G+            +
Sbjct: 222 SGKLKEAMEVL------DRQMQRECYPDVITYTILIEATCNDSGVGQA-----------M 264

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYR 690
            +  +M K   KP+VVT++ ++N   +    ++A   L  + L+  Q   + H +++   
Sbjct: 265 KLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSM 324

Query: 691 DNI--WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENV 748
            +   W+ A  L  ++     S +   +N L + L    +KR      L G+   V E +
Sbjct: 325 CSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLC---RKR------LLGRAIDVLEKM 375

Query: 749 WSESCL 754
               C+
Sbjct: 376 PKHGCM 381


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 221/469 (47%), Gaps = 35/469 (7%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G +  A+ +      +G   T   ++ L+SAY R G+ ++A  V  +M     +P+L 
Sbjct: 251 RKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLW 310

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNG-VQPDRITFNSLLAVCSRGGLWEAARNLF 322
           TYN +    C  G VD      + D+M R G + PD +T+N+L   C +      A  L 
Sbjct: 311 TYNVLAAGLCQAGKVD--EAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLL 368

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            EM  +G+   + T+N ++  +CK  +++ A   + +M    ++P+V+TY+T+I  + KA
Sbjct: 369 EEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKA 428

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G +  A  +  EM   G+ LD  + NTVL    K  R+EEA  + +     G   D V+Y
Sbjct: 429 GNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSY 488

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             ++  Y K+   +   R++++M    ++P++ TY+TLI   S+ G  KEA+    E  +
Sbjct: 489 GTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELME 548

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
            GL  D   Y+ +I A CK G +E+A    ++M +   +P+VVT N++++         C
Sbjct: 549 KGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGL-------C 601

Query: 563 TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
                         +  LD      +  V++  + D   +  +  L+      G      
Sbjct: 602 L-------------NGKLDKALKLFESWVEKGKKVD---VITYNTLIQTMCKDG------ 639

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             ++   L  F  M    ++P+  T++ +L+A S     E+A  +L +L
Sbjct: 640 --DVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKL 686



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 176/368 (47%), Gaps = 12/368 (3%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + E    +G   T+   + +I    + G  + A+   N M    L P+++TYN +I 
Sbjct: 364 ALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIH 423

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           A  K G +      + D+M+R G++ D  T N++L    +   +E A+ L      RG  
Sbjct: 424 AHCKAG-NIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFM 482

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  +Y T++ A  K    + A  +  EM  K ++P++ TY+T+I G ++ GRL +A++ 
Sbjct: 483 PDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDK 542

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
            +E+   G+  D  +YN ++  Y K G  E A     +M  +  + D VT N L+ G   
Sbjct: 543 LNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCL 602

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            GK D+  ++FE         +++TY+TLI    K G    A+  F + +  GL+ D   
Sbjct: 603 NGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFT 662

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--R 569
           Y+ ++ AL + G  E A ++L ++ + G         ++  +F        +VD+ E  +
Sbjct: 663 YNVVLSALSEAGRTEEAQNMLHKLAESG---------TLSQSFSSPLLKPSSVDEAESGK 713

Query: 570 DLGKQKES 577
           D   ++E+
Sbjct: 714 DAKTEEET 721



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 205/399 (51%), Gaps = 31/399 (7%)

Query: 292 RNGVQPDRITFNSLLAVCSRGGLW--EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           R  V+P     N++L+  +R      +A+ + F  +V   +  + +T+N L+   C    
Sbjct: 160 RVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGT 219

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  A   ++ M    +SP+ VTY+T+++ + + G L +A  + + MK  G+   R +YNT
Sbjct: 220 LADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNT 279

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM-KAD 468
           ++S YA+LG  ++A  V + M ++G   D  TYN L  G  + GK DE  R+ ++M +  
Sbjct: 280 LVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLG 339

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + P+++TY+TL D   K     +A+++  E ++ G+KA +V ++ +I  LCK+G +E A
Sbjct: 340 TLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGA 399

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDD-VERDLGKQKESAN--LDA 582
           +  L++M  +G+ P+V+TYN++I A    G  A     +D+ V R L     + N  L  
Sbjct: 400 LGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYN 459

Query: 583 MCSQDDKDVQEA----------GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
           +C +  K  +EA          G   +++   +G ++A    +   E   R        +
Sbjct: 460 LCKE--KRYEEAQGLLQSPPQRGFMPDEV--SYGTVMAAYFKEYNSEPALR--------L 507

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           + +M + K+ P++ T++ ++   SR    ++A   L EL
Sbjct: 508 WDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNEL 546



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 162/323 (50%), Gaps = 5/323 (1%)

Query: 233 ALISAYGRSGYCQEAISVFNSMKR-YNLKPNLVTYNAVIDACGKG-GVDFKHVVEIFDDM 290
           A +SAY R      A  + +S++R   ++P+L   NAV+ A  +      +  ++ F  +
Sbjct: 136 AALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSI 195

Query: 291 LRNGVQPDRITFNSLLAV-CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           +   + P+  TFN L+   CS+G L +A   L + M   G+  D  TYNTLL+A C+   
Sbjct: 196 VALRLHPNHYTFNLLVHTHCSKGTLADALSTL-STMQGFGLSPDAVTYNTLLNAHCRKGM 254

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  A  ++A M    ++P   TY+T++  YA+ G +  A  +   M   G   D  +YN 
Sbjct: 255 LGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNV 314

Query: 410 VLSIYAKLGRFEEALLVCKEMESSG-IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           + +   + G+ +EA  +  EME  G +  D VTYN L     K     +  R+ E+M+  
Sbjct: 315 LAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREK 374

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V   L+T++ +I    K G  + A+    +    GL  DV+ Y+ LI A CK G +  A
Sbjct: 375 GVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKA 434

Query: 529 VSLLDEMTKEGIRPNVVTYNSII 551
            +L+DEM + G++ +  T N+++
Sbjct: 435 YTLMDEMVRRGLKLDTFTLNTVL 457



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 9/179 (5%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+D A  +FE+ + +G    V  ++ LI    + G    A+  F  M+   L+P+  TY
Sbjct: 604 GKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTY 663

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI--TFNSLLAVCSRGGLWEAARN--LF 322
           N V+ A  + G       E   +ML    +   +  +F+S L   S     E+ ++    
Sbjct: 664 NVVLSALSEAG-----RTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTE 718

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            E V    D     Y  L++ +C   Q   A  I+ EM  K +S +  TY T+++G  K
Sbjct: 719 EETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777


>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18900-like [Glycine max]
          Length = 882

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 134/525 (25%), Positives = 239/525 (45%), Gaps = 38/525 (7%)

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   D  TY T++  + +  +     +++ +M      PNVVTY+ +I  Y +A  L +A
Sbjct: 381 GFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEA 440

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           LN+F++M+ +G   DRV+Y T++ I+AK G  + A+ + + M+  G+  D  TY+ ++  
Sbjct: 441 LNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINC 500

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            GK G      R+F +M      PN++TY+ LI + +K   Y+ A++++R+ + AG K D
Sbjct: 501 LGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPD 560

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            V YS +++ L   G +E A ++  EM +    P+   Y  +ID +G++        +VE
Sbjct: 561 KVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAG-------NVE 613

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
           +    +   A L A        +     T N ++  F ++                 +  
Sbjct: 614 K--AWEWYHAMLRA-------GLLPNVPTCNSLLSAFLRV---------------HRLPD 649

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
              + Q M  L + P++ T++ +L+ C+   S  D     E + +  +  +     +   
Sbjct: 650 AYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYDMGFCCELMAVSGHPAHAFLQSMPAA 709

Query: 689 YRD--NIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWE 746
             D  N+        D +   D        +A+ D L   G K  A  V     ++ V+ 
Sbjct: 710 GPDGQNVRDHVSKFLDLMHSEDREGKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 769

Query: 747 NVWSE--SC---LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKV 801
           +   E  +C   ++LH+MS G A   +   L      +      P  + I+TGWG+ S+V
Sbjct: 770 DAIREKSTCYWLINLHVMSDGTAVTALSRTLAWFRRQMLASGVGPNRIDIITGWGRRSRV 829

Query: 802 VGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRES 846
            G   +R+AV+ LL     PF+  N N G F+  G  ++ WL  S
Sbjct: 830 TGSSLVRQAVQELLHVFSFPFFTENGNSGCFVGCGEPLSQWLVHS 874



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 167/330 (50%), Gaps = 16/330 (4%)

Query: 247 AISVFNSMKRYNLKPNLV----TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
           A+S F  +KR   +P       TY  ++   G+   +F  + ++ + M+++G QP+ +T+
Sbjct: 369 ALSFFYWLKR---QPGFWHDGHTYTTMVGILGRAR-EFGAINKLLEQMVKDGCQPNVVTY 424

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           N L+    R      A N+FN+M   G + D  TY TL+D   K   +D+A  +   M  
Sbjct: 425 NRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQE 484

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
             +SP+  TYS MI+   K+G L  A  +F EM   G   + V+YN ++++ AK   ++ 
Sbjct: 485 VGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQT 544

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           AL + ++M+++G + D VTY+ ++   G  G  +E   +F +MK +   P+   Y  LID
Sbjct: 545 ALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLID 604

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
           ++ K G  ++A + +    +AGL  +V   ++L+ A  +   +  A +LL  M   G+ P
Sbjct: 605 LWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNP 664

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLG 572
           ++ TY  ++          CT      D+G
Sbjct: 665 SLQTYTLLLSC--------CTEAQSPYDMG 686



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 177/402 (44%), Gaps = 36/402 (8%)

Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
           F + +KR+      G   + M+ ILGR  +      + E  + +G    V  ++ LI +Y
Sbjct: 372 FFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSY 431

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
           GR+ Y  EA++VFN M+    +P+ VTY  +ID   K G      + +++ M   G+ PD
Sbjct: 432 GRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGF-LDVAMSMYERMQEVGLSPD 490

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
             T++ ++    + G   AA  LF EMV +G   +I TYN L+    K      A ++  
Sbjct: 491 TFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYR 550

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
           +M      P+ VTYS +++     G L++A  +F EMK      D   Y  ++ ++ K G
Sbjct: 551 DMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAG 610

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
             E+A      M  +G+  +  T N+LL  + +  +  +   + + M    ++P+L TY+
Sbjct: 611 NVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYT 670

Query: 479 TLIDVYSKG------GLYKEAMQI--------FREFKQAGLKADVV-------------- 510
            L+   ++       G   E M +         +    AG     V              
Sbjct: 671 LLLSCCTEAQSPYDMGFCCELMAVSGHPAHAFLQSMPAAGPDGQNVRDHVSKFLDLMHSE 730

Query: 511 -------LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
                  L  A++D L K+GL E A S+ +   ++ + P+ +
Sbjct: 731 DREGKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAI 772



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 154/368 (41%), Gaps = 14/368 (3%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I I  + G +D+A +++E     G     + +S +I+  G+SG    A  +F  M    
Sbjct: 462 LIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQG 521

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             PN+VTYN +I    K   +++  ++++ DM   G +PD++T++ ++ V    G  E A
Sbjct: 522 CVPNIVTYNILIALQAKAR-NYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEA 580

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +F EM       D   Y  L+D   K   ++ A+E    M    + PNV T ++++  
Sbjct: 581 EAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSA 640

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           + +  RL DA N+   M  LG+     +Y  +LS   +     +    C+ M  SG    
Sbjct: 641 FLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYDMGFCCELMAVSGHPAH 700

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           A   +    G   Q   D V +  + M ++           ++D   K GL +EA  ++ 
Sbjct: 701 AFLQSMPAAGPDGQNVRDHVSKFLDLMHSEDREGKRGLVDAVVDFLHKSGLKEEAGSVWE 760

Query: 499 EFKQAGLKADVVLYSA----------LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
              Q  +  D +   +          + D      L  +      +M   G+ PN +   
Sbjct: 761 VAAQKNVYPDAIREKSTCYWLINLHVMSDGTAVTALSRTLAWFRRQMLASGVGPNRI--- 817

Query: 549 SIIDAFGR 556
            II  +GR
Sbjct: 818 DIITGWGR 825


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 179/331 (54%), Gaps = 3/331 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIF 287
           + F  ++S+  ++ +    IS+F   +   + PNL T N +I+  C    + F     +F
Sbjct: 94  FHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITF--AFSVF 151

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            ++L+ G  PD IT N+L+      G  + A    +++V +G   D  +Y TL++ +CK 
Sbjct: 152 ANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKA 211

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +      ++ ++   ++ P+VV Y+T+I    K  R+ DA +++SEM   GI  +  +Y
Sbjct: 212 GETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTY 271

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           NT++  +  +G  +EA  +  EM+   I  D  T+N L+   GK+GK DE   +FE+MK 
Sbjct: 272 NTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKH 331

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + PN++TY++LID   K    + A+ + ++ K+ G++ DV  Y+ L+DALCK G +E+
Sbjct: 332 KNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLEN 391

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           A      +  +G   NV TYN +I+   ++ 
Sbjct: 392 AKQFFQHLLVKGYHLNVRTYNVMINGLCKAG 422



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 175/344 (50%), Gaps = 7/344 (2%)

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA- 272
           ++F+   + G    +   + LI+ +    +   A SVF ++ +    P+ +T N +I   
Sbjct: 114 SLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGL 173

Query: 273 --CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
             CG    + K  +   D ++  G Q D++++ +L+    + G  +A   L  ++    +
Sbjct: 174 CFCG----EIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSV 229

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             D+  Y T++  +CK  ++  A ++ +EM  K ISPNV TY+T+I G+   G L +A +
Sbjct: 230 KPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFS 289

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           + +EMK   I  D  ++N ++    K G+ +EA+ + +EM+   +  + VTY +L+ G  
Sbjct: 290 LLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLC 349

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K    +    + ++MK   + P++ +Y+ L+D   KGG  + A Q F+     G   +V 
Sbjct: 350 KNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVR 409

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            Y+ +I+ LCK GL    + L  +M  +G  P+ +T+ +II A 
Sbjct: 410 TYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICAL 453



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 170/342 (49%), Gaps = 1/342 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+    L  +  A ++F   L  GY       + LI      G  + A+   + +    
Sbjct: 134 LINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQG 193

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            + + V+Y  +I+   K G + K V  +   +  + V+PD + + +++    +      A
Sbjct: 194 FQLDQVSYGTLINGLCKAG-ETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDA 252

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            +L++EM+ +GI  ++FTYNTL+   C    +  AF ++ EM  KNI+P+V T++ +ID 
Sbjct: 253 CDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDA 312

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K G++D+A+++F EMK   +  + V+Y +++    K    E A+ +CK+M+  GI+ D
Sbjct: 313 LGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPD 372

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
             +Y  LL    K G+ +  ++ F+ +       N+ TY+ +I+   K GL+ + M +  
Sbjct: 373 VYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKS 432

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           + +  G   D + +  +I AL +    + A   L EM   G+
Sbjct: 433 KMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 191/416 (45%), Gaps = 31/416 (7%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           V  F+ ML     P    F+++L+   +   +    +LF +    G+  ++ T N L++ 
Sbjct: 78  VASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINC 137

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C  A +  AF + A +  +   P+ +T +T+I G    G +  AL    ++   G  LD
Sbjct: 138 FCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLD 197

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
           +VSY T+++   K G  +    + +++E   ++ D V Y  ++    K  +  +   ++ 
Sbjct: 198 QVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYS 257

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M    +SPN+ TY+TLI  +   G  KEA  +  E K   +  DV  ++ LIDAL K G
Sbjct: 258 EMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEG 317

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESAN-- 579
            ++ A+SL +EM  + + PN+VTY S+ID   ++   E  +   +  ++ G Q +  +  
Sbjct: 318 KIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYT 377

Query: 580 --LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
             LDA+C        + GR +N   + F  L+ +      +        LC  G+F  + 
Sbjct: 378 ILLDALC--------KGGRLENA-KQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVM 428

Query: 638 KLKIK-------PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
            LK K       P+ +TF  I+ A    +  + A   L E+         +A GLL
Sbjct: 429 DLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREM---------IARGLL 475



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 128/241 (53%), Gaps = 1/241 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I  L +  +V  A +++   + +G    V+ ++ LI  +   G  +EA S+ N M
Sbjct: 235 MYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEM 294

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           K  N+ P++ T+N +IDA GK G      + +F++M    + P+ +T+ SL+    +   
Sbjct: 295 KLKNINPDVYTFNILIDALGKEG-KIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHH 353

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E A  L  +M  +GI  D+++Y  LLDA+CKG +++ A +    +  K    NV TY+ 
Sbjct: 354 LERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNV 413

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           MI+G  KAG   D +++ S+M+  G   D +++ T++    +    ++A    +EM + G
Sbjct: 414 MINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARG 473

Query: 435 I 435
           +
Sbjct: 474 L 474


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 228/474 (48%), Gaps = 39/474 (8%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIF 287
           + F+   SAY + G   +A+ +FN M++  L P+ V+Y A+IDA C  G VD   V   F
Sbjct: 379 HIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVK--F 436

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           + M+  GV PD + F+SL+        WE    LF EM++ GI  +I  +NT+L  +CK 
Sbjct: 437 NQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKE 496

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            ++     ++  +    + P+V++Y+T+IDG+  AG +D+A  +   M  +G+  D  SY
Sbjct: 497 GRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSY 556

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           NT+L  Y K GR + A    ++M S+GI    VTYN +L G  +  ++ E + ++  M  
Sbjct: 557 NTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMIN 616

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
                ++ TY+ +++   K     EA+++F+     GL+ +++ ++ +I AL K G  E 
Sbjct: 617 SGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKED 676

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE---CTVDDVERDLGKQKESANLDAMC 584
           A+ L   +   G+  NVVTY  +++      + E        +E++ G    S  L+A+ 
Sbjct: 677 AMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKN-GTAPNSQMLNALV 735

Query: 585 SQ-----------------DDKDVQEAGRTDNQIIKVFGQ--------------LVAEKA 613
            +                 D+++      T + +I +F                 +  +A
Sbjct: 736 RRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEA 795

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
                  + R+ I     +F++M    + P+VVT++ IL+   +   F +A  L
Sbjct: 796 NSSALIKKARR-IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKEL 848



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 194/368 (52%), Gaps = 1/368 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++++ L + G+   A+  F++ + +G   +V  +  ++  Y   G   E   + N M   
Sbjct: 313 SLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVAN 372

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            + PN   +N    A  K G+     ++IF+ M + G+ PD +++ +L+    + G  + 
Sbjct: 373 GISPNHHIFNIFFSAYAKCGI-IDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDD 431

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A   FN+M++ G+  DI  +++L+  +C   + +   E+  EM    I PN+V ++T++ 
Sbjct: 432 AEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILC 491

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
              K GR+ +   +   ++ +G+  D +SYNT++  +   G  +EA  + + M S G++ 
Sbjct: 492 NLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKP 551

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D+ +YN LL GY K G+ D     F +M ++ ++P ++TY+T++    +   + EA +++
Sbjct: 552 DSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELY 611

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
                +G K D+  Y+ +++ LCK+  V+ A+ +   +  +G++ N++T+N +I A  + 
Sbjct: 612 LNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKG 671

Query: 558 ATTECTVD 565
              E  +D
Sbjct: 672 GRKEDAMD 679



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 211/484 (43%), Gaps = 81/484 (16%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            +S LI  + R G+ +   + F  + +   + + +  N +++    G  D K V E  D 
Sbjct: 96  TYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLN----GLCDGKRVGEAMDV 151

Query: 290 MLRN----GVQPDRITFNSLL-AVCSRGGLWEAAR------------------------- 319
           +L+     G  PD +++N LL  +C+     EA                           
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211

Query: 320 ------------NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
                       NLF EM+ RGI  D+ TY T++D +CK    D A  +  +M    + P
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKP 271

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           N+ TY+ +I GY   G+  + + M  EM   G   +  +Y ++L+   K GR  EA    
Sbjct: 272 NIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFF 331

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
             M   GI+    TY  +L GY  +G   E+  +   M A+ +SPN   ++     Y+K 
Sbjct: 332 DSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKC 391

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G+  +AM IF + +Q GL  D V Y ALIDALCK G V+ A    ++M  EG+ P++V +
Sbjct: 392 GIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVF 451

Query: 548 NSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
           +S++          CTVD  E+      E  N+              G   N  I  F  
Sbjct: 452 SSLVYGL-------CTVDKWEKVEELFFEMLNV--------------GIHPN--IVFFNT 488

Query: 608 LVAE--KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
           ++    K G+  +  R    I C          + ++P+V++++ +++      + ++AS
Sbjct: 489 ILCNLCKEGRVMEGQRLVDSIEC----------MGVRPDVISYNTLIDGHCLAGTIDEAS 538

Query: 666 MLLE 669
            LLE
Sbjct: 539 KLLE 542



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 205/442 (46%), Gaps = 36/442 (8%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V ++S +I+ +   G   +  ++F  M    + P++VTY  VID   K  + F     +F
Sbjct: 203 VVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQL-FDRAEAVF 261

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
             M+ NGV+P+  T+N L+      G W+    +  EM   G   +  TY +LL+ +CK 
Sbjct: 262 QQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKN 321

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +   A      M  K I P+V TY  M+ GYA  G L +  ++ + M   GI  +   +
Sbjct: 322 GRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIF 381

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N   S YAK G  ++A+ +  +M   G+  DAV+Y AL+    K G+ D+    F QM  
Sbjct: 382 NIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMIN 441

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
           + V+P+++ +S+L+        +++  ++F E    G+  ++V ++ ++  LCK G V  
Sbjct: 442 EGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVME 501

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESANLDAMCS 585
              L+D +   G+RP+V++YN++ID    + T +     +E    +G + +S + + +  
Sbjct: 502 GQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLH 561

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
              K    AGR D+                                 F+KM    I P V
Sbjct: 562 GYCK----AGRIDSAYSH-----------------------------FRKMLSNGITPGV 588

Query: 646 VTFSAILNACSRCNSFEDASML 667
           VT++ IL+   +   F +A  L
Sbjct: 589 VTYNTILHGLFQTKRFSEAKEL 610



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 182/359 (50%), Gaps = 5/359 (1%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+I  L +LG+VD A+  F   +NEG    +  FS+L+         ++   +F  M   
Sbjct: 418 ALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNV 477

Query: 258 NLKPNLVTYNAVI-DACGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            + PN+V +N ++ + C +G V + + +V+  + M   GV+PD I++N+L+      G  
Sbjct: 478 GIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECM---GVRPDVISYNTLIDGHCLAGTI 534

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  L   MV  G+  D F+YNTLL   CK  ++D A+    +M +  I+P VVTY+T+
Sbjct: 535 DEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTI 594

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G  +  R  +A  ++  M   G   D  +YN +L+   K    +EA+ + + + S G+
Sbjct: 595 LHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGL 654

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + +T+N ++G   K G+ ++   +F  + A+ +  N++TY  +++   + G  +E   
Sbjct: 655 QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDS 714

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +F   ++ G   +  + +AL+  L   G +  A + L ++ +        T + +I  F
Sbjct: 715 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIF 773



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 173/386 (44%), Gaps = 35/386 (9%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G+V   + + ++    G    V +++ LI  +  +G   EA  +   M    LKP+
Sbjct: 493 LCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPD 552

Query: 263 LVTYNAVIDA-CGKGGVD--FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
             +YN ++   C  G +D  + H    F  ML NG+ P  +T+N++L    +   +  A+
Sbjct: 553 SFSYNTLLHGYCKAGRIDSAYSH----FRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK 608

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            L+  M++ G   DI+TYN +L+ +CK   +D A ++   + +K +  N++T++ MI   
Sbjct: 609 ELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGAL 668

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K GR +DA+++F+ +   G+  + V+Y  V+    + G  EE   +   ME +G   ++
Sbjct: 669 LKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNS 728

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS-------------- 485
              NAL+     +G          ++     S    T S LI ++S              
Sbjct: 729 QMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKK 788

Query: 486 --------KGGLYKEAMQI------FREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
                      L K+A +I      FRE    GL  DVV Y+ ++  L + G    A  L
Sbjct: 789 YRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKEL 848

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRS 557
              M     + N+ TYN I++   +S
Sbjct: 849 YLSMINSRTQMNIYTYNIILNGLCKS 874



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/387 (20%), Positives = 178/387 (45%), Gaps = 29/387 (7%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +D A  + E  ++ G     ++++ L+  Y ++G    A S F  M    + P +VTY
Sbjct: 532 GTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTY 591

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N ++    +    F    E++ +M+ +G + D  T+N +L    +    + A  +F  + 
Sbjct: 592 NTILHGLFQTK-RFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLC 650

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +G+  +I T+N ++ A+ KG + + A ++ A +PA  +  NVVTY  +++   + G L+
Sbjct: 651 SKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLE 710

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +  ++FS M+  G   +    N ++      G    A     +++      +A T + L+
Sbjct: 711 EFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLI 770

Query: 447 GGYG----------------------------KQGKYDEVRRMFEQMKADCVSPNLLTYS 478
             +                             K  + D+   +F +M    ++P+++TY+
Sbjct: 771 SIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYN 830

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           T++    + G + EA +++     +  + ++  Y+ +++ LCK+  V+ A  +   +  +
Sbjct: 831 TILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSK 890

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVD 565
           G++ N++T+N +I A  +    E  +D
Sbjct: 891 GLQLNIITFNIMIGALLKGGRKEDAMD 917



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 164/356 (46%), Gaps = 29/356 (8%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           AK ++   +N G    +Y ++ +++   +S    EAI +F ++    L+ N++T+N +I 
Sbjct: 607 AKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIG 666

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           A  KGG   +  +++F  +  NG+  + +T+  ++      G  E   +LF+ M   G  
Sbjct: 667 ALLKGGRK-EDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTA 725

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA----------- 380
            +    N L+  +     +  A   ++++  +N S    T S +I  ++           
Sbjct: 726 PNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSL 785

Query: 381 -----------------KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
                            KA R+DDA ++F EM   G+  D V+YNT+L    + GRF EA
Sbjct: 786 PKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEA 845

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
             +   M +S  + +  TYN +L G  K    DE  +MF+ + +  +  N++T++ +I  
Sbjct: 846 KELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGA 905

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
             KGG  ++AM +F      GL  DVV Y  + + L + G +E    L   M K G
Sbjct: 906 LLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSG 961



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 112/482 (23%), Positives = 195/482 (40%), Gaps = 80/482 (16%)

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG-------LWEAARN 320
            + D    G +     +++FD++L +      + FN LLA  SR           E   +
Sbjct: 18  VIADRARSGSLGLGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVS 77

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           LFN MV     +D +                             ++PN  TYS +I  + 
Sbjct: 78  LFNRMV-----RDCYI---------------------------KVAPNRCTYSILIGCFC 105

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL-LVCKEMESSGIRKDA 439
           + G L+     F  +   G  +D +  N +L+      R  EA+ ++ + M   G   D 
Sbjct: 106 RMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDT 165

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCV---SPNLLTYSTLIDVYSKGGLYKEAMQI 496
           V+YN LL G   + + +E   +   M  D V    PN+++YST+I+ +   G   +   +
Sbjct: 166 VSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNL 225

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F E    G+  DVV Y+ +ID LCK  L + A ++  +M   G++PN+ TYN +I  +  
Sbjct: 226 FLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGY-- 283

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
                         +GK KE   +        +++   G   N     +G L+      G
Sbjct: 284 ------------LSIGKWKEVVRM-------LEEMSAGGPKPNCC--TYGSLLNYLCKNG 322

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
               RCR+        F  M    IKP+V T+  +L+  +   +  +   LL    +  N
Sbjct: 323 ----RCREARF----FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLN--LMVAN 372

Query: 677 QVYGVAHGLLMGY----RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
            +    H   + +    +  I  +A+ +F++++    S  +  Y AL D L   G+   A
Sbjct: 373 GISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDA 432

Query: 733 QL 734
           ++
Sbjct: 433 EV 434



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 105/202 (51%)

Query: 286  IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
            +F +ML  G+ PD +T+N++L    + G +  A+ L+  M++     +I+TYN +L+ +C
Sbjct: 813  LFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLC 872

Query: 346  KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
            K   +D AF++   + +K +  N++T++ MI    K GR +DA+++F+ +   G+  D V
Sbjct: 873  KSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVV 932

Query: 406  SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            +Y  V     + G  EE   +   ME SG   D+   NAL+    ++G          ++
Sbjct: 933  TYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKL 992

Query: 466  KADCVSPNLLTYSTLIDVYSKG 487
                 S    T S LI ++S+G
Sbjct: 993  DEKNFSLEASTTSELISLFSRG 1014


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 189/360 (52%), Gaps = 1/360 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+   RL +VD A ++    +  G+      FS+LI+          A+  F+ M    
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +PNL TYN +I    K G      V +   M + G +PD + +N+++    +  L   A
Sbjct: 185 YQPNLHTYNTIIKGFCKIG-KTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEA 243

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            ++F+E+  +G+  D+FTY+ L+  +C   Q + A  +  EM + NI P+VVT++ ++D 
Sbjct: 244 LDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDK 303

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K G L +A  +   M   G+  +  +YN++++ Y    +  EA +V   M + G   +
Sbjct: 304 LCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPN 363

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            V+YN L+ GY K  + DE R +F++M    + PN   Y+TLI    + G + EA ++F+
Sbjct: 364 VVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFK 423

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           + +  G   D+V  + L+D+LCK G +++A+ L   M    ++PN+VTY+ +I A  +S 
Sbjct: 424 DMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 171/327 (52%), Gaps = 1/327 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++I+ L    K   A   F+  +  GY   ++ ++ +I  + + G    A+ +   M +
Sbjct: 158 SSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDK 217

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +P++V YN +ID   K  +     ++IF ++   GV+PD  T++ L+         E
Sbjct: 218 AGGRPDIVIYNTIIDGLCKDRL-VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKE 276

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LFNEM+   I  D+ T+N L+D +CK   +  A  I+  M  K + PN  TY++++
Sbjct: 277 EASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLM 336

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY    ++ +A  +F  M   G   + VSYN +++ Y K  R +EA  +  EM   G+ 
Sbjct: 337 NGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLI 396

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +   YN L+ G  + G++ E R +F+ M+A   SP+L+T + L+D   K G    A+++
Sbjct: 397 PNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRL 456

Query: 497 FREFKQAGLKADVVLYSALIDALCKNG 523
           FR  + + LK ++V Y  LI A+ K+G
Sbjct: 457 FRAMQDSCLKPNLVTYDILIRAMYKSG 483



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 203/429 (47%), Gaps = 35/429 (8%)

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD-----DMLRNGVQPDR 299
           ++A+  FN M   +  P +V ++ ++ A     V  KH   +       ++LR  ++ D 
Sbjct: 66  EDALFSFNHMIHKHPLPCIVEFDKLLSAL----VRIKHYGTVLSLSKRIELLR--IERDV 119

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
             FN L+   SR    + A ++  +++  G + D  T+++L++ +C   +   A E   E
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M A    PN+ TY+T+I G+ K G+   A+ +  +M   G   D V YNT++    K   
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
             EAL +  E++  G+R D  TY+ L+ G     + +E   +F +M +  + P+++T++ 
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           L+D   K G+  EA  I +   + G++ +   Y++L++  C    V  A  + D M  +G
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDL-------GKQKESANLDAMCSQDDKDVQ 592
             PNVV+YN +I+ + ++        D  R+L       G    + N + + S     + 
Sbjct: 360 CMPNVVSYNILINGYCKAQRI-----DEARELFDEMSFRGLIPNTFNYNTLIS----GLC 410

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNV 645
           +AGR   +  ++F  + A+             + LC LG       +F+ M    +KPN+
Sbjct: 411 QAGR-HCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNL 469

Query: 646 VTFSAILNA 654
           VT+  ++ A
Sbjct: 470 VTYDILIRA 478



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 181/397 (45%), Gaps = 44/397 (11%)

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M  K+  P +V +  ++    +       L++   ++ L I  D   +N +++ +++L R
Sbjct: 75  MIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQR 134

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            + A  V  ++   G   DAVT+++L+ G   + K+      F++M A    PNL TY+T
Sbjct: 135 VDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNT 194

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +I  + K G    A+ + ++  +AG + D+V+Y+ +ID LCK+ LV  A+ +  E+  +G
Sbjct: 195 IIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKG 254

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           +RP+V TY+ ++          C  D  E       E  +L+ M      DV        
Sbjct: 255 VRPDVFTYSILMHGL-------CNSDQKEEASALFNEMMSLNIM-----PDVV------- 295

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
                F  LV         +  C++ +L    G+ + M +  ++PN  T+++++N     
Sbjct: 296 ----TFNILV---------DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQ 342

Query: 659 NSFEDASMLLEELRLFDNQVYGVAHGLLM-GYRDNIWV-QALSLFDEVKLMDSSTASAFY 716
           N   +A M+ + +         V++ +L+ GY     + +A  LFDE+        +  Y
Sbjct: 343 NKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNY 402

Query: 717 NALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESC 753
           N L   L   G+   A         R++++++ ++ C
Sbjct: 403 NTLISGLCQAGRHCEA---------RELFKDMQAQGC 430


>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
          Length = 577

 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 178/325 (54%), Gaps = 3/325 (0%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQE--AISVFNSMKRY 257
           + +  R G+ D A+ + +   ++     + +F+ LI+A  +SG      A+ + + +++ 
Sbjct: 1   MGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQA 60

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            L+P+ +TYN +I AC +G  +    V +F++M+ +  +PD  T+N++++V  R G  + 
Sbjct: 61  GLRPDAITYNTLISACSQGS-NLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQE 119

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +F E+V +G   D  TYN+LL A  K   ++    +  E+       + +TY+TMI 
Sbjct: 120 AELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIH 179

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            Y K GRLD AL ++ EM+ +G   D V+Y  ++    K+ R  EA  V +EM  +G++ 
Sbjct: 180 MYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKP 239

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
             VT++AL+  Y K G+ D+  R F++M    V P+ L Y  ++DV+++    ++ M ++
Sbjct: 240 TLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLY 299

Query: 498 REFKQAGLKADVVLYSALIDALCKN 522
           R   + G K D  LY  L+ AL K 
Sbjct: 300 RAMIKDGYKPDDGLYQVLLAALAKG 324



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 156/283 (55%), Gaps = 2/283 (0%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA--ARNLFNEMVHRGIDQDIFTY 337
           F    ++ D M    ++PD ++FN+L+   ++ G   A  A  L +E+   G+  D  TY
Sbjct: 10  FDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITY 69

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           NTL+ A  +G+ +D A  +  EM A    P++ TY+ M+  + + G+  +A  MF E+  
Sbjct: 70  NTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVE 129

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   D V+YN++L  +AK G  E    VC+E+  +G RKD +TYN ++  YGK G+ D 
Sbjct: 130 KGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDL 189

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              ++++M+A   +P+ +TY+ L+D   K     EA ++  E   AGLK  +V +SALI 
Sbjct: 190 ALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALIC 249

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           A  K+G  + A    D M + G++P+ + Y  ++D F RS  T
Sbjct: 250 AYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDET 292



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 151/285 (52%), Gaps = 1/285 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS   +   +D A  +FE  +       ++ ++A++S +GR G  QEA  +F  +  
Sbjct: 70  NTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVE 129

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +P+ VTYN+++ A  K G D + V  + +++++ G + D IT+N+++ +  + G  +
Sbjct: 130 KGFQPDAVTYNSLLYAFAKEG-DVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLD 188

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L++EM   G   D  TY  L+D++ K  ++  A +++ EM    + P +VT+S +I
Sbjct: 189 LALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALI 248

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             YAK+GR DDA   F  M   G+  DR++Y  +L ++A+     + +++ + M   G +
Sbjct: 249 CAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYK 308

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
            D   Y  LL    K  ++DE+  + + M+A      L+  S LI
Sbjct: 309 PDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILI 353



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 124/501 (24%), Positives = 230/501 (45%), Gaps = 51/501 (10%)

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE--ALLVCKEMESSGIR 436
           YA++GR DDA  +   M+   I  D VS+NT+++  AK G      AL +  E+  +G+R
Sbjct: 4   YARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLR 63

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            DA+TYN L+    +    D+   +FE+M A    P+L TY+ ++ V+ + G  +EA  +
Sbjct: 64  PDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELM 123

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F+E  + G + D V Y++L+ A  K G VE    + +E+ K G R + +TYN++I  +G+
Sbjct: 124 FKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGK 183

Query: 557 SATTECTVD--DVERDLGKQKESAN----LDAMCSQDDKDVQEAGRTDNQI--------I 602
               +  +   D  R +G   ++      +D++   D   + EAG+   ++        +
Sbjct: 184 MGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDR--ISEAGKVLEEMADAGLKPTL 241

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
             F  L+   A  G++++  R         F +M +  +KP+ + +  +L+  +R +   
Sbjct: 242 VTFSALICAYAKSGRQDDAER--------TFDRMVESGVKPDRLAYLVMLDVFARSD--- 290

Query: 663 DASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSL---FDEVKLMDSSTASAF-YNA 718
           +   L+   R      Y    GL       + + AL+     DE++ +     + F  N 
Sbjct: 291 ETRKLMVLYRAMIKDGYKPDDGLY-----QVLLAALAKGNEHDEIEGVIQDMEAVFEMNP 345

Query: 719 L---TDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNI 775
           L   + ++      +GA L+     +R   +    +   D  L +S  +  ++      I
Sbjct: 346 LVISSILIKAECISQGASLL-----KRACLQGYEPDDGPDRQL-ASNMSLGVISKSQSAI 399

Query: 776 HSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFIST 835
            + +    E PK + ++TG G+++ V    +LR+ +   L  MG+PF       GRF+  
Sbjct: 400 DASLQGAPESPKSIVLVTGEGEYNMV----SLRKTIRAYLLEMGSPFLPCRSRSGRFVVK 455

Query: 836 GPMVASWLRESGTLKVLVLHD 856
              +  WL++S     L L D
Sbjct: 456 AYSLKMWLKDSPFCLDLELKD 476



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 124/247 (50%), Gaps = 36/247 (14%)

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE--AMQIFREFKQA 503
           +G Y + G++D+ R++ + M+   + P+L++++TLI+  +K G      A+++  E +QA
Sbjct: 1   MGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQA 60

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE-- 561
           GL+ D + Y+ LI A  +   ++ AV++ +EM     RP++ TYN+++   GR    +  
Sbjct: 61  GLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEA 120

Query: 562 ----------------CTVDDVERDLGKQKESANLDAMCSQDDK-DVQEAGRTDNQIIKV 604
                            T + +     K+ +   ++ +C +  K   ++ G T N +I +
Sbjct: 121 ELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHM 180

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           +G++       G+ +          LG++ +M  +   P+ VT++ ++++  + +   +A
Sbjct: 181 YGKM-------GRLD--------LALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEA 225

Query: 665 SMLLEEL 671
             +LEE+
Sbjct: 226 GKVLEEM 232



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 110/237 (46%), Gaps = 20/237 (8%)

Query: 154 CG-ADDYTFLLRELGNRGEWSKAIQ----CFAFA----VKREERKNDQ---------GKL 195
           CG A +   + +EL  +G    A+      +AFA    V+R ER  ++         G  
Sbjct: 114 CGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGIT 173

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + MI + G++G++DLA  +++     G       ++ L+ + G+     EA  V   M 
Sbjct: 174 YNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMA 233

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              LKP LVT++A+I A  K G         FD M+ +GV+PDR+ +  +L V +R    
Sbjct: 234 DAGLKPTLVTFSALICAYAKSGRQ-DDAERTFDRMVESGVKPDRLAYLVMLDVFARSDET 292

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVT 371
                L+  M+  G   D   Y  LL A+ KG + D    ++ +M A   ++P V++
Sbjct: 293 RKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVIS 349


>gi|298705285|emb|CBJ48975.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 674

 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 238/492 (48%), Gaps = 46/492 (9%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           V +++ +I+A   +   + A  +F  M K   ++PN+ TY A+I AC K G +++  V  
Sbjct: 109 VVSYNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRG-NWEDSVNY 167

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
            + M ++G+ P+ + ++++++ C R   W+ A  L   M   GI     TYNT++ A  K
Sbjct: 168 LEQMRQSGLAPNAVIYSTVISACERSDQWQKAVKLLRTMRRDGILPVTVTYNTVISACGK 227

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             Q  LA  ++ EM      P  VT+++ +    +A +    L +  +M+   + +D+ +
Sbjct: 228 SGQWSLAVSLLDEMSDMGCPPGPVTFASAMLACERARQWHHVLRIMDQMQEDEVWVDKYA 287

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T +    +LG++   +    EM+S+G+ KD VT +  +     +G++ +  ++ E M 
Sbjct: 288 YTTAIHAAGQLGKWARCVRYLDEMDSNGVAKDVVTVSVAISACADKGQWAQAEKLLEDML 347

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            D ++PN++TY++L+ V  +GG ++ A++I    +  G+  +V  YS  I A        
Sbjct: 348 DDGLTPNVITYTSLMVVLRRGGQHERAIKILDLMRSKGVMPNVRTYSVAIAACADAKEWR 407

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A++LL EM +EG+ PN ++YN+ I A G              D G+  E+  LD M   
Sbjct: 408 RALALLKEMEREGVSPNEISYNTAIRACG--------------DAGQLSEA--LDLMDEM 451

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
           + + V+ +       +  +G  VA  A Q   + +   E+L        M + +I+PN +
Sbjct: 452 ESRGVKAS-------VVTYGTAVA--ACQRAADWKMALELLA------AMRREQIEPNEI 496

Query: 647 TFSAILNACSRC----NSFEDASMLLEELRLFDN-QVYGVAHGLLMGY--------RDNI 693
            +  I+ AC        +  DA  + E ++LF+  Q        +  Y        R+  
Sbjct: 497 VYGGIIKACCAAGQASKALVDADQIEEAIQLFNKLQARRNCSVTIHSYTPLVDALTRELR 556

Query: 694 WVQALSLFDEVK 705
           W +A+ LF E++
Sbjct: 557 WQEAIMLFQEME 568



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 239/495 (48%), Gaps = 27/495 (5%)

Query: 199 MISILGRLGKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           +I+      K   A+ IF     E G    V+ + ALISA  + G  +++++    M++ 
Sbjct: 115 VITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRGNWEDSVNYLEQMRQS 174

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            L PN V Y+ VI AC +    ++  V++   M R+G+ P  +T+N++++ C + G W  
Sbjct: 175 GLAPNAVIYSTVISACERSD-QWQKAVKLLRTMRRDGILPVTVTYNTVISACGKSGQWSL 233

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A +L +EM   G      T+ + + A  +  Q      IM +M    +  +   Y+T I 
Sbjct: 234 AVSLLDEMSDMGCPPGPVTFASAMLACERARQWHHVLRIMDQMQEDEVWVDKYAYTTAIH 293

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
              + G+    +    EM   G+  D V+ +  +S  A  G++ +A  + ++M   G+  
Sbjct: 294 AAGQLGKWARCVRYLDEMDSNGVAKDVVTVSVAISACADKGQWAQAEKLLEDMLDDGLTP 353

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + +TY +L+    + G+++   ++ + M++  V PN+ TYS  I   +    ++ A+ + 
Sbjct: 354 NVITYTSLMVVLRRGGQHERAIKILDLMRSKGVMPNVRTYSVAIAACADAKEWRRALALL 413

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           +E ++ G+  + + Y+  I A    G +  A+ L+DEM   G++ +VVTY + + A  R+
Sbjct: 414 KEMEREGVSPNEISYNTAIRACGDAGQLSEALDLMDEMESRGVKASVVTYGTAVAACQRA 473

Query: 558 ATTECTVDDVERDLGKQKESAN------LDAMCS--QDDKDVQEAGRTDNQIIKVFGQLV 609
           A  +  ++ +     +Q E         + A C+  Q  K + +A + + + I++F +L 
Sbjct: 474 ADWKMALELLAAMRREQIEPNEIVYGGIIKACCAAGQASKALVDADQIE-EAIQLFNKLQ 532

Query: 610 AEK------------AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
           A +                 +E R ++ I+    +FQ+M   KI P V  +++++ AC R
Sbjct: 533 ARRNCSVTIHSYTPLVDALTRELRWQEAIM----LFQEMEDRKIMPTVQCYTSVVRACER 588

Query: 658 CNSFEDASMLLEELR 672
              ++ A  LL+++R
Sbjct: 589 SGQYDVALRLLDDMR 603



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 185/446 (41%), Gaps = 51/446 (11%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+     RG W  ++        R+        + S +IS   R  +   A  +  T
Sbjct: 148 YGALISACAKRGNWEDSVN--YLEQMRQSGLAPNAVIYSTVISACERSDQWQKAVKLLRT 205

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G       ++ +ISA G+SG    A+S+ + M      P  VT+ + + AC +   
Sbjct: 206 MRRDGILPVTVTYNTVISACGKSGQWSLAVSLLDEMSDMGCPPGPVTFASAMLACERAR- 264

Query: 279 DFKHVVEIFDDMLR-----------------------------------NGVQPDRITFN 303
            + HV+ I D M                                     NGV  D +T +
Sbjct: 265 QWHHVLRIMDQMQEDEVWVDKYAYTTAIHAAGQLGKWARCVRYLDEMDSNGVAKDVVTVS 324

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
             ++ C+  G W  A  L  +M+  G+  ++ TY +L+  + +G Q + A +I+  M +K
Sbjct: 325 VAISACADKGQWAQAEKLLEDMLDDGLTPNVITYTSLMVVLRRGGQHERAIKILDLMRSK 384

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
            + PNV TYS  I   A A     AL +  EM+  G+  + +SYNT +      G+  EA
Sbjct: 385 GVMPNVRTYSVAIAACADAKEWRRALALLKEMEREGVSPNEISYNTAIRACGDAGQLSEA 444

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
           L +  EMES G++   VTY   +    +   +     +   M+ + + PN + Y  +I  
Sbjct: 445 LDLMDEMESRGVKASVVTYGTAVAACQRAADWKMALELLAAMRREQIEPNEIVYGGIIKA 504

Query: 484 YSKGG----------LYKEAMQIFREFKQAGLKADVVL--YSALIDALCKNGLVESAVSL 531
               G            +EA+Q+F +  QA     V +  Y+ L+DAL +    + A+ L
Sbjct: 505 CCAAGQASKALVDADQIEEAIQLFNKL-QARRNCSVTIHSYTPLVDALTRELRWQEAIML 563

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRS 557
             EM    I P V  Y S++ A  RS
Sbjct: 564 FQEMEDRKIMPTVQCYTSVVRACERS 589



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 180/413 (43%), Gaps = 38/413 (9%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV-HRGIDQDIFTYNTLLDAICKGAQMDL 352
            V+P+ +++N+++  C+     + A  +F EM   RGI  ++FTY  L+ A  K    + 
Sbjct: 104 AVEPNVVSYNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRGNWED 163

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           +   + +M    ++PN V YST+I    ++ +   A+ +   M+  GI    V+YNTV+S
Sbjct: 164 SVNYLEQMRQSGLAPNAVIYSTVISACERSDQWQKAVKLLRTMRRDGILPVTVTYNTVIS 223

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              K G++  A+ +  EM   G     VT+ + +    +  ++  V R+ +QM+ D V  
Sbjct: 224 ACGKSGQWSLAVSLLDEMSDMGCPPGPVTFASAMLACERARQWHHVLRIMDQMQEDEVWV 283

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           +   Y+T I    + G +   ++   E    G+  DVV  S  I A    G    A  LL
Sbjct: 284 DKYAYTTAIHAAGQLGKWARCVRYLDEMDSNGVAKDVVTVSVAISACADKGQWAQAEKLL 343

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA--NLDAMCSQDDKD 590
           ++M  +G+ PNV+TY S++    R               G Q E A   LD M       
Sbjct: 344 EDMLDDGLTPNVITYTSLMVVLRR---------------GGQHERAIKILDLM------- 381

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
                R+   +  V    VA  A    KE R        L + ++M +  + PN ++++ 
Sbjct: 382 -----RSKGVMPNVRTYSVAIAACADAKEWR------RALALLKEMEREGVSPNEISYNT 430

Query: 651 ILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLF 701
            + AC       +A  L++E+     +   V +G  +    R   W  AL L 
Sbjct: 431 AIRACGDAGQLSEALDLMDEMESRGVKASVVTYGTAVAACQRAADWKMALELL 483



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 151/322 (46%), Gaps = 20/322 (6%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK---LASAMISILGRLGKVDLAKNI 215
           YT  +   G  G+W++ ++        E   N   K     S  IS     G+   A+ +
Sbjct: 288 YTTAIHAAGQLGKWARCVRYL-----DEMDSNGVAKDVVTVSVAISACADKGQWAQAEKL 342

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
            E  L++G    V  +++L+    R G  + AI + + M+   + PN+ TY+  I AC  
Sbjct: 343 LEDMLDDGLTPNVITYTSLMVVLRRGGQHERAIKILDLMRSKGVMPNVRTYSVAIAACAD 402

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
              +++  + +  +M R GV P+ I++N+ +  C   G    A +L +EM  RG+   + 
Sbjct: 403 AK-EWRRALALLKEMEREGVSPNEISYNTAIRACGDAGQLSEALDLMDEMESRGVKASVV 461

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG----------RL 385
           TY T + A  + A   +A E++A M  + I PN + Y  +I     AG          ++
Sbjct: 462 TYGTAVAACQRAADWKMALELLAAMRREQIEPNEIVYGGIIKACCAAGQASKALVDADQI 521

Query: 386 DDALNMFSEMKF-LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           ++A+ +F++++      +   SY  ++    +  R++EA+++ +EME   I      Y +
Sbjct: 522 EEAIQLFNKLQARRNCSVTIHSYTPLVDALTRELRWQEAIMLFQEMEDRKIMPTVQCYTS 581

Query: 445 LLGGYGKQGKYDEVRRMFEQMK 466
           ++    + G+YD   R+ + M+
Sbjct: 582 VVRACERSGQYDVALRLLDDMR 603



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 119/251 (47%), Gaps = 12/251 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++ +L R G+ + A  I +   ++G    V  +S  I+A   +   + A+++   M+R
Sbjct: 359 TSLMVVLRRGGQHERAIKILDLMRSKGVMPNVRTYSVAIAACADAKEWRRALALLKEMER 418

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN ++YN  I ACG  G      +++ D+M   GV+   +T+ + +A C R   W+
Sbjct: 419 EGVSPNEISYNTAIRACGDAG-QLSEALDLMDEMESRGVKASVVTYGTAVAACQRAADWK 477

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGA----------QMDLAFEIMAEMPA-KNI 365
            A  L   M    I+ +   Y  ++ A C             Q++ A ++  ++ A +N 
Sbjct: 478 MALELLAAMRREQIEPNEIVYGGIIKACCAAGQASKALVDADQIEEAIQLFNKLQARRNC 537

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           S  + +Y+ ++D   +  R  +A+ +F EM+   I      Y +V+    + G+++ AL 
Sbjct: 538 SVTIHSYTPLVDALTRELRWQEAIMLFQEMEDRKIMPTVQCYTSVVRACERSGQYDVALR 597

Query: 426 VCKEMESSGIR 436
           +  +M    +R
Sbjct: 598 LLDDMRKKRMR 608


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 142/580 (24%), Positives = 272/580 (46%), Gaps = 37/580 (6%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           +L+ L   G  SK++  F   +           +   +I +  R G V  A   F     
Sbjct: 69  ILKHLSQMGVGSKSV--FGALMNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGI 126

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDF 280
            G+  +VY  + L+    +          F  M    + P++ T+N +I+  C +G    
Sbjct: 127 RGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEG--KL 184

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           K    +   M  +G  P  +T+N++L    + G ++AA  L ++M  +GI+ D  TYN L
Sbjct: 185 KKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNML 244

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +D +CK  +    + ++ +M  + ISPN +TY+++I+G+ K G++  A  +F EM  L +
Sbjct: 245 VDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNL 304

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             + V+YN ++  +   G FE+AL + + ME++G + + V+Y+ALL G  +  K++  + 
Sbjct: 305 LPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKS 364

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + E+M+ + +    + Y+ +ID   + GL  E++++  +  + G+  DVV +S LI+  C
Sbjct: 365 ILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFC 424

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN- 579
           + G +++   ++ +M K G+ PN + Y ++I  + ++         V   + +    AN 
Sbjct: 425 RVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDV-VEAFKVYVAMSRIGYDANC 483

Query: 580 ------LDAMCSQDDKDVQE--------AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
                 + ++C      V E         G   N I   F  ++    G G   N  +  
Sbjct: 484 FICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSI--TFDCII---NGYGNSGNGLKA- 537

Query: 626 ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGL 685
                 +F +M K    P+  T+  +L A  R   F++A  LL++L    + V  V +  
Sbjct: 538 ----FSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNT 593

Query: 686 LM--GYRDNIWVQALSLFDEV----KLMDSSTASAFYNAL 719
           ++   ++  +   A++LFDE+     L DS T +  +  L
Sbjct: 594 ILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGL 633



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 251/554 (45%), Gaps = 19/554 (3%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            F  LI  Y R G   +A+  F  M      P++ T N ++    K       V   F +
Sbjct: 100 VFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKER-KVGAVWLFFKE 158

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           ML   V PD  TFN L+ V    G  + A  L  +M   G    + TYNT+L+  CK  +
Sbjct: 159 MLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGR 218

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              A E++ +M +K I  +  TY+ ++D   K  R      +  +M+   I  + ++YN+
Sbjct: 219 YKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNS 278

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +++ + K G+   A  + +EM    +  + VTYNAL+ G+   G +++   + E M+A  
Sbjct: 279 IINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATG 338

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             PN ++YS L++   +   ++ +  I    +  G+    + Y+A+ID LC+NGL+  +V
Sbjct: 339 PKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESV 398

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            LLD+M K+G+ P+VVT++ +I+ F R       + +V+  + K  + A L         
Sbjct: 399 KLLDKMLKDGVVPDVVTFSVLINGFCRVG----KIKNVKEIICKMYK-AGLAPNSIIYTT 453

Query: 590 DVQEAGRTDNQIIKVFGQLVA-EKAGQGKKENRCRQEI--LCILG-------VFQKMHKL 639
            +    +T + +++ F   VA  + G       C   +  LC  G        F  M K+
Sbjct: 454 LIYNYCKTGD-VVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKI 512

Query: 640 KIKPNVVTFSAILNACSRC-NSFEDASMLLEELRLFDNQVYGVAHGLLMGY-RDNIWVQA 697
              PN +TF  I+N      N  +  SM  E ++   +  +    GLL    R   + +A
Sbjct: 513 GNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEA 572

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLH 757
             L D++  + S+  +  YN +    +  G    A  +  E  +R V  + ++ + +   
Sbjct: 573 KRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAG 632

Query: 758 LMSSGAARAMVHAW 771
           L+  G   A +H +
Sbjct: 633 LIRRGKMVAALHFY 646



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 143/577 (24%), Positives = 256/577 (44%), Gaps = 47/577 (8%)

Query: 205  RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
            + G V  A  ++      GY    +  + L+S+  + G    A   F+ M +    PN +
Sbjct: 460  KTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSI 519

Query: 265  TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
            T++ +I+  G  G   K    +FD+M++ G  P   T+  LL    R G ++ A+ L ++
Sbjct: 520  TFDCIINGYGNSGNGLK-AFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDK 578

Query: 325  MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
            + +     D  TYNT+L    K   +  A  +  EM  +N+ P+  TY+ +  G  + G+
Sbjct: 579  LHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGK 638

Query: 385  LDDALNMFSEMKFLGIGL---DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            +  AL+ +  +  LG G    ++V Y T +    + G+ + AL  C++ME +G+  D + 
Sbjct: 639  MVAALHFYGNL--LGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIA 696

Query: 442  YNALLGGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
             N +L GY + GK  +   +F  M     +SP+L TY+ L+  Y+K     +   ++   
Sbjct: 697  TNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIM 756

Query: 501  KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
             + G+  D +   +LI   CK+ +++  + LL +M  +G+  +  T+N +I  +      
Sbjct: 757  MRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKY------ 810

Query: 561  ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ---------LVAE 611
             C  D+V    GK  +  N+      +  D+     T + II V  +         L+ E
Sbjct: 811  -CETDEV----GKAFDLVNI-----MNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHE 860

Query: 612  KAGQGKKENRCRQEI-----LC----ILGVFQ---KMHKLKIKPNVVTFSAILNACSRCN 659
               +G   +R RQ I     +C    I G F+   +M  L I    V  SA++   ++C 
Sbjct: 861  MLERGCIPDR-RQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCG 919

Query: 660  SFEDASMLLEEL--RLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYN 717
              E+A ++L+ +  +     +      + M  R+   V+AL L D +   D       YN
Sbjct: 920  KVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYN 979

Query: 718  ALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
             L   L   G    A  +  E K+R +W N+ +   L
Sbjct: 980  VLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCIL 1016



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/459 (23%), Positives = 216/459 (47%), Gaps = 11/459 (2%)

Query: 99   RRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADD 158
            + + R + K+H+    +   T ++++ E      +    D V+L D + +        D 
Sbjct: 570  KEAKRLLDKLHYIPSAVDTVTYNTILVET---FKSGMLTDAVALFDEMVQRNVL---PDS 623

Query: 159  YTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF 216
            YT+  +   L  RG+   A+  +   + +     ++  + +  +  L R G+   A    
Sbjct: 624  YTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEK-VMYTTFVDGLFRAGQSKAALYFC 682

Query: 217  ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVTYNAVIDACGK 275
            E     G    + A + +++ Y R G   +A  +F  M     + P+L TYN ++    K
Sbjct: 683  EDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAK 742

Query: 276  GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
               +      +++ M+R G+ PD++T +SL+    +  + +    L  +M+  G+  D  
Sbjct: 743  KK-NLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQC 801

Query: 336  TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            T+N L+   C+  ++  AF+++  M   +I P++ T+ ++I   ++   + ++  +  EM
Sbjct: 802  TFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEM 861

Query: 396  KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
               G   DR  Y  +++   ++G    A  +  EME+ GI    V  +AL+ G  K GK 
Sbjct: 862  LERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKV 921

Query: 456  DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            +E + + + M    + P + T++TL+ ++ +     EA+++        +K DV+ Y+ L
Sbjct: 922  EEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVL 981

Query: 516  IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            I  LC +G V SA+ L  E+ + G+ PN+ TY  +IDA 
Sbjct: 982  ISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAI 1020



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 169/377 (44%), Gaps = 3/377 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G  + A  I E     G      ++SAL++   R    + + S+   M+   +    + Y
Sbjct: 322 GNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAY 381

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
            A+ID   + G+     V++ D ML++GV PD +TF+ L+    R G  +  + +  +M 
Sbjct: 382 TAMIDGLCRNGL-LNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMY 440

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G+  +   Y TL+   CK   +  AF++   M       N    + ++    K G++ 
Sbjct: 441 KAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVG 500

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            A   F  M  +G   + ++++ +++ Y   G   +A  +  EM  +G      TY  LL
Sbjct: 501 VAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLL 560

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
               + GK+ E +R+ +++     + + +TY+T++    K G+  +A+ +F E  Q  + 
Sbjct: 561 KALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVL 620

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEG-IRPNVVTYNSIIDAFGRSATTECTVD 565
            D   Y+ +   L + G + +A+     +  +G + P  V Y + +D   R+  ++  + 
Sbjct: 621 PDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALY 680

Query: 566 DVERDLGKQKESANLDA 582
             E D+ K    A+L A
Sbjct: 681 FCE-DMEKNGLCADLIA 696



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/445 (23%), Positives = 195/445 (43%), Gaps = 30/445 (6%)

Query: 124 VAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAV 183
           VAE   HH++        +G++     F  C  + Y       GN G   KA   F   +
Sbjct: 501 VAEYFFHHMS-------KIGNVPNSITFD-CIINGY-------GNSGNGLKAFSMFDEMI 545

Query: 184 KREERKN--DQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
           K     +    G L  A    L R GK   AK + +             ++ ++    +S
Sbjct: 546 KAGHHPSHFTYGGLLKA----LCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKS 601

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG-VQPDRI 300
           G   +A+++F+ M + N+ P+  TY  +     + G      +  + ++L  G V P+++
Sbjct: 602 GMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRG-KMVAALHFYGNLLGKGAVSPEKV 660

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
            + + +    R G  +AA     +M   G+  D+   N +L+   +  +M  A +I   M
Sbjct: 661 MYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMM 720

Query: 361 -PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
                ISP++ TY+ ++ GYAK   L    N+++ M   GI  D+++ ++++  + K   
Sbjct: 721 WSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAM 780

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ---MKADCVSPNLLT 476
            +  L + K+M   G+  D  T+N L+  Y +    DEV + F+    M    + P++ T
Sbjct: 781 LDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCET---DEVGKAFDLVNIMNLFDIFPDMTT 837

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           + ++I V S+    +E+  +  E  + G   D   Y AL++ +C+ G +  A  L DEM 
Sbjct: 838 HDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEME 897

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTE 561
             GI    V  ++++    +    E
Sbjct: 898 ALGISSGDVAESALVRGLAKCGKVE 922


>gi|224141335|ref|XP_002324029.1| predicted protein [Populus trichocarpa]
 gi|222867031|gb|EEF04162.1| predicted protein [Populus trichocarpa]
          Length = 629

 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 241/498 (48%), Gaps = 40/498 (8%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R  + D A  +F+   N       Y +S LI+ +G++G    ++     M++  +  +LV
Sbjct: 119 RAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFWLQQMEQDRVSGDLV 178

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
            Y+ +I+   K   D+   + IF  + R+G+ PD + +NS++ V  +  L+  A+ L  E
Sbjct: 179 LYSNLIELSRKL-CDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKE 237

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G+  D  +Y+TLL    +  +   A  + AEM       ++ T + MID Y +   
Sbjct: 238 MREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDM 297

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
             +A  +F  M+ +GI  + VSYNT+L +Y +   F EA+ + + M+   I ++ VTYN 
Sbjct: 298 AKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNT 357

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++  YGK  ++++   + ++M+   + PN +TYST+I ++ K G    A  +F++ + +G
Sbjct: 358 MIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSG 417

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           ++ D VLY  +I A  ++GLV  A  LL E+      P+ +   + I    R+       
Sbjct: 418 VEIDQVLYQTMIVAYERSGLVAHAKRLLHELK----HPDSIPRETAIKILARA------- 466

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                  G+ +E+  +        +   +AG   +  I VFG +V   +   K  N    
Sbjct: 467 -------GRIEEATWV-------FRQAFDAGEVKD--ISVFGCMVDLFSRNRKPAN---- 506

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYG 680
               ++ VF+KM      P+    + +LNA  + + FE A  L +E++    +F ++V+ 
Sbjct: 507 ----VIEVFEKMRGAGYFPDSNVIALVLNAYGKLHEFEKADALYKEMQEEECVFPDEVHF 562

Query: 681 VAHGLLMGYRDNIWVQAL 698
               L    +D + ++AL
Sbjct: 563 QMLSLYGARKDFMMIEAL 580



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 183/376 (48%), Gaps = 31/376 (8%)

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           P    +N +L    R   W+ A  LF+EM +R +  D +TY+TL+    K    D +   
Sbjct: 105 PSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFW 164

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           + +M    +S ++V YS +I+   K      A+++F  +K  GI  D V+YN++++++ K
Sbjct: 165 LQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGK 224

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
              F EA L+ KEM   G+  D V+Y+ LL  Y +  K+ E   +F +M       +L T
Sbjct: 225 AKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTT 284

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
            + +IDVY +  + KEA ++F   ++ G++ +VV Y+ L+    +  L   A+ L   M 
Sbjct: 285 CNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQ 344

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
           K+ I  NVVTYN++I  +G+S   E              ++ NL  M    ++ ++    
Sbjct: 345 KKDIEQNVVTYNTMIKVYGKSLEHE--------------KATNL--MQEMQNRGIEPNAI 388

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
           T + II ++G     KAG   K +R          +FQK+    ++ + V +  ++ A  
Sbjct: 389 TYSTIISIWG-----KAG---KLDRAAM-------LFQKLRSSGVEIDQVLYQTMIVAYE 433

Query: 657 RCNSFEDASMLLEELR 672
           R      A  LL EL+
Sbjct: 434 RSGLVAHAKRLLHELK 449



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/312 (21%), Positives = 143/312 (45%), Gaps = 16/312 (5%)

Query: 201 SILGRLGKVDL---AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++L   G+ +L   A ++F     +     V  ++ +I  YG+S   ++A ++   M+  
Sbjct: 322 TLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNR 381

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            ++PN +TY+ +I   GK G        +F  +  +GV+ D++ + +++    R GL   
Sbjct: 382 GIEPNAITYSTIISIWGKAG-KLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAH 440

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A+ L +E+ H     D     T +  + +  +++ A  +  +        ++  +  M+D
Sbjct: 441 AKRLLHELKH----PDSIPRETAIKILARAGRIEEATWVFRQAFDAGEVKDISVFGCMVD 496

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM-ESSGIR 436
            +++  +  + + +F +M+  G   D      VL+ Y KL  FE+A  + KEM E   + 
Sbjct: 497 LFSRNRKPANVIEVFEKMRGAGYFPDSNVIALVLNAYGKLHEFEKADALYKEMQEEECVF 556

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL---LTYSTLIDVYSKGGLYKEA 493
            D V +  +L  YG +  +  +  +FE++ +D   PN+     +  +  +Y +     +A
Sbjct: 557 PDEVHFQ-MLSLYGARKDFMMIEALFERLDSD---PNINKKELHLVVASIYERKNRLNDA 612

Query: 494 MQIFREFKQAGL 505
            +I     + G+
Sbjct: 613 SRIMNRMSKGGV 624


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 176/344 (51%), Gaps = 1/344 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A++  L +  K+  A  + E     G   T+  ++AL++   + G  +EAI +   +  
Sbjct: 169 TAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 228

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++VTY ++ID  GK    F+   ++F +M   G+  D + + +L+    + G   
Sbjct: 229 NGCTPDVVTYTSLIDGLGKEKRSFE-AYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIP 287

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +++  M  +G   D+ T +T++D +CK  ++  A  I   M A+ ++PN V YS +I
Sbjct: 288 QASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 347

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G  KA ++D AL M ++MK      D ++YN ++    K G  E A     EM  +G +
Sbjct: 348 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 407

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  TYN L+ G+ K G  D    +F+ M +   SPN++TY TLI    K     +A   
Sbjct: 408 PDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLY 467

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           F+  K+ G   D  +YS+L+D LCK+G +E    L DEM + G+
Sbjct: 468 FQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 511



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 227/476 (47%), Gaps = 33/476 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A++ +  R  +   A N+ +  L   +   V  ++ LI+ Y  +   +EA +V   M+ 
Sbjct: 63  NALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEE 122

Query: 257 -YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            Y + P+L T+N V+    K G      ++ F+    NG   D  T+ +++   ++    
Sbjct: 123 DYGVAPSLKTHNLVLHGLCKSG-KVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKI 181

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  L  ++   G    I TYN LL+ +CK  +++ A +++ ++     +P+VVTY+++
Sbjct: 182 QDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 241

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K  R  +A  +F EM   G+ LD V Y  ++    + G+  +A  V K M S G 
Sbjct: 242 IDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGC 301

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VT + ++ G  K G+     R+F+ M+A  ++PN + YS LI    K      A++
Sbjct: 302 VPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 361

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +  + K+A    D + Y+ LID LCK+G VE+A +  DEM + G +P+V TYN ++  F 
Sbjct: 362 MLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFC 421

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
           +                    + N DA C   D D+  +  + N +   +G L+   +G 
Sbjct: 422 K--------------------AGNTDAACGVFD-DMSSSHCSPNVV--TYGTLI---SGL 455

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            K+    +  +      FQ M +    P+   +S++++   +    E   ML +E+
Sbjct: 456 CKRRQLTKASLY-----FQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM 506



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 179/382 (46%), Gaps = 34/382 (8%)

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
           R G Q    T N+LL V +R      A NL    +      D+ T+N L+   C   + +
Sbjct: 52  RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPE 111

Query: 352 LAFEIMAEMPAK-NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
            AF ++ EM     ++P++ T++ ++ G  K+G++  A++ F      G  +D  +Y  +
Sbjct: 112 EAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAI 171

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +   AK  + ++A+ + +++ ++G      TYNALL G  K G+ +E   +  ++  +  
Sbjct: 172 VDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 231

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           +P+++TY++LID   K     EA ++F+E    GL  D V Y+ALI  L + G +  A S
Sbjct: 232 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASS 291

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
           +   MT +G  P+VVT +++ID   ++      V                     +  K 
Sbjct: 292 VYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAV---------------------RIFKS 330

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKIKPNVVTFS 649
           ++  G   N++  V+  L+            C+ +++ C L +  +M K    P+ +T++
Sbjct: 331 MEARGLAPNEV--VYSALI---------HGLCKARKMDCALEMLAQMKKAFCTPDTITYN 379

Query: 650 AILNACSRCNSFEDASMLLEEL 671
            +++   +    E A    +E+
Sbjct: 380 ILIDGLCKSGDVEAARAFFDEM 401



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 154/329 (46%), Gaps = 3/329 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  LG+  +   A  +F+     G       ++ALI    ++G   +A SV+ +M  
Sbjct: 239 TSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTS 298

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++VT + +ID   K G      V IF  M   G+ P+ + +++L+    +    +
Sbjct: 299 QGCVPDVVTLSTMIDGLCKAG-RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 357

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +  +M       D  TYN L+D +CK   ++ A     EM      P+V TY+ ++
Sbjct: 358 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILV 417

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+ KAG  D A  +F +M       + V+Y T++S   K  +  +A L  + M+  G  
Sbjct: 418 SGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCP 477

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D+  Y++L+ G  K GK +    +F++M+   V+ N  T + LI    K     EA+ +
Sbjct: 478 PDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSL 536

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLV 525
           F   ++ G+      Y+++I  L K+  V
Sbjct: 537 FNAIRKEGMPHPYA-YNSIISTLIKSAKV 564


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 235/471 (49%), Gaps = 26/471 (5%)

Query: 103 RFVSKMHFGRPKIAMSTRHSVVAEEALHHVTA---------------FARDDVSLGDILK 147
           RFV ++ F  P      +H+ ++  A+ H+                   R  VS  +I+ 
Sbjct: 97  RFVDQLGFHFPNF----KHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVN 152

Query: 148 KFE--FKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISIL 203
             +  F  CG++D  F  L+R      +  +A +  AF + R +         +A+I  L
Sbjct: 153 SLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHE--AFTLLRSKGFTVSIDACNALIGSL 210

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
            R+G V+LA  +++     G G  VY  + +++A  + G  ++  +  + ++   + P++
Sbjct: 211 VRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDI 270

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           VTYN +I A    G+  +   E+ + M   G  P   T+N+++    + G +E A+ +F 
Sbjct: 271 VTYNTLISAYSSKGL-MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 329

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EM+  G+  D  TY +LL   CK   +    ++ ++M ++++ P++V +S+M+  + ++G
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            LD AL  F+ +K  G+  D V Y  ++  Y + G    A+ +  EM   G   D VTYN
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            +L G  K+    E  ++F +M    + P+  T + LID + K G  + AM++F++ K+ 
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            ++ DVV Y+ L+D   K G +++A  +  +M  + I P  ++Y+ +++A 
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 249/505 (49%), Gaps = 42/505 (8%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K+  A   F    ++G+  ++ A +ALI +  R G+ + A  V+  + R  +  N+ T N
Sbjct: 180 KLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLN 239

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            +++A  K G   + V      +   GV PD +T+N+L++  S  GL E A  L N M  
Sbjct: 240 IMVNALCKDG-KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           +G    ++TYNT+++ +CK  + + A E+ AEM    +SP+  TY +++    K G + +
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
              +FS+M+   +  D V +++++S++ + G  ++AL+    ++ +G+  D V Y  L+ 
Sbjct: 359 TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ 418

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           GY ++G       +  +M     + +++TY+T++    K  +  EA ++F E  +  L  
Sbjct: 419 GYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP 478

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR----SATTECT 563
           D    + LID  CK G +++A+ L  +M ++ IR +VVTYN+++D FG+        E  
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538

Query: 564 VDDVERDLGKQKESANL--DAMCSQD-------------DKDVQEAGRTDNQIIKVFGQL 608
            D V +++     S ++  +A+CS+               K+++      N +IK + + 
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598

Query: 609 VAEKAGQGKKENRCRQEIL--CI------------------LGVFQKMHKLK--IKPNVV 646
                G+   E    +  +  CI                   G+ +KM + +  + P+V 
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658

Query: 647 TFSAILNACSRCNSFEDASMLLEEL 671
           T+++IL+   R N  ++A ++L ++
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKM 683



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 203/404 (50%), Gaps = 9/404 (2%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           G   Y  ++  L   G++ +A + FA  + R     D     S ++    + G V   + 
Sbjct: 304 GVYTYNTVINGLCKHGKYERAKEVFA-EMLRSGLSPDSTTYRSLLMEACKK-GDVVETEK 361

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-C 273
           +F    +      +  FS+++S + RSG   +A+  FNS+K   L P+ V Y  +I   C
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQ 332
            KG +     + + ++ML+ G   D +T+N++L  +C R  L EA + LFNEM  R +  
Sbjct: 422 RKGMISV--AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK-LFNEMTERALFP 478

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D +T   L+D  CK   +  A E+  +M  K I  +VVTY+T++DG+ K G +D A  ++
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           ++M    I    +SY+ +++     G   EA  V  EM S  I+   +  N+++ GY + 
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR--EFKQAGLKADVV 510
           G   +     E+M ++   P+ ++Y+TLI  + +     +A  + +  E +Q GL  DV 
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            Y++++   C+   ++ A  +L +M + G+ P+  TY  +I+ F
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 207/415 (49%), Gaps = 11/415 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L + GK + AK +F   L  G       + +L+    + G   E   VF+ M+ 
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 368

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            ++ P+LV +++++    + G +    +  F+ +   G+ PD + +  L+    R G+  
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSG-NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A NL NEM+ +G   D+ TYNT+L  +CK   +  A ++  EM  + + P+  T + +I
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG+ K G L +A+ +F +MK   I LD V+YNT+L  + K+G  + A  +  +M S  I 
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              ++Y+ L+     +G   E  R++++M +  + P ++  +++I  Y + G   +    
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE--GIRPNVVTYNSIIDAF 554
             +    G   D + Y+ LI    +   +  A  L+ +M +E  G+ P+V TYNSI+  F
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667

Query: 555 GR-SATTECTV---DDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIK 603
            R +   E  V     +ER +   + +    ++   SQD  ++ EA R  +++++
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQD--NLTEAFRIHDEMLQ 720



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 151/306 (49%), Gaps = 3/306 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G + +A N+    L +G    V  ++ ++    +     EA  +FN M    L P+  
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           T   +ID   K G + ++ +E+F  M    ++ D +T+N+LL    + G  + A+ ++ +
Sbjct: 482 TLTILIDGHCKLG-NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           MV + I     +Y+ L++A+C    +  AF +  EM +KNI P V+  ++MI GY ++G 
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS--GIRKDAVTY 442
             D  +   +M   G   D +SYNT++  + +     +A  + K+ME    G+  D  TY
Sbjct: 601 ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           N++L G+ +Q +  E   +  +M    V+P+  TY+ +I+ +       EA +I  E  Q
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720

Query: 503 AGLKAD 508
            G   D
Sbjct: 721 RGFSPD 726



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 143/309 (46%), Gaps = 6/309 (1%)

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT--FNSLLAVCSRGGL 314
           Y  + +L      +D  G    +FKH       M+   V+  R++   + LL +  R G+
Sbjct: 86  YRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGV 145

Query: 315 --WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              E   +L +   + G +  +F  + L+    +  ++  A E    + +K  + ++   
Sbjct: 146 SRLEIVNSLDSTFSNCGSNDSVF--DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDAC 203

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +I    + G ++ A  ++ E+   G+G++  + N +++   K G+ E+      +++ 
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G+  D VTYN L+  Y  +G  +E   +   M     SP + TY+T+I+   K G Y+ 
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A ++F E  ++GL  D   Y +L+   CK G V     +  +M    + P++V ++S++ 
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383

Query: 553 AFGRSATTE 561
            F RS   +
Sbjct: 384 LFTRSGNLD 392



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 37/199 (18%)

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
            +  LI  Y +    +EA + F   +  G    +   +ALI +L + G VE A  +  E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
           ++ G+  NV T N +++A  +    E                  +    SQ    VQE G
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKME-----------------KVGTFLSQ----VQEKG 265

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK---PNVVTFSAIL 652
              +  I  +  L++  + +G  E             F+ M+ +  K   P V T++ ++
Sbjct: 266 VYPD--IVTYNTLISAYSSKGLMEE-----------AFELMNAMPGKGFSPGVYTYNTVI 312

Query: 653 NACSRCNSFEDASMLLEEL 671
           N   +   +E A  +  E+
Sbjct: 313 NGLCKHGKYERAKEVFAEM 331


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 139/555 (25%), Positives = 260/555 (46%), Gaps = 70/555 (12%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           +S +I IL + GKV  A  + E  +  G    +  +S LI          EA  +F SM+
Sbjct: 350 SSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQ 409

Query: 256 RYNLKPNLVTYNAV--------------------IDACGKGGVDFKHVV----------- 284
           +   +P+ +TY  +                    ++  G+ G+  K  +           
Sbjct: 410 KLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLC 469

Query: 285 ---------EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
                    E+F++M   G+ PD I++ +L+      G WE A+ LFNEM+  GI  D+ 
Sbjct: 470 KDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVT 529

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           T + L+D +CK  ++  A +++  +  +    +VVT +T++ G     R+  A  +F +M
Sbjct: 530 TSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKM 589

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS----GI--RKDAVTYNALLGGY 449
           + LG   + V+  T++    + G  + AL + K M S     GI  + +A++Y+ ++ G 
Sbjct: 590 QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGL 649

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            K G+ DE R +F++MKA  V P++++Y++LI  + + G +K+A  +F E    G++ DV
Sbjct: 650 CKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDV 709

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-------------FGR 556
             +S LID LCK G V  A  LL+ M + G  PN VTY +++               F +
Sbjct: 710 TTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMK 769

Query: 557 SATTECTVDDVERD--LGKQKESANLDAMCSQDDKDVQEAGR--TDNQIIKVFGQLVAEK 612
                C  D V     +    ++ N+        K + + G+  T+ +   +   ++ + 
Sbjct: 770 MQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDG 829

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             +  +E+  R+       +F++M  L + PNV++++++++   R    EDA  L  E+ 
Sbjct: 830 LCKHGREDEARE-------LFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMV 882

Query: 673 LFDNQVYGVAHGLLM 687
               Q+  V + +++
Sbjct: 883 DQGVQLNAVTYSVMI 897



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 198/418 (47%), Gaps = 50/418 (11%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+      G+W KA +C  F    +         +S +I +L + GKV  A  + E 
Sbjct: 496 YTTLIHGFCLSGKWEKA-KCL-FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEV 553

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY--------------------- 257
            +  G    V   + L+          +A  +F  M++                      
Sbjct: 554 VIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGN 613

Query: 258 --------------------NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP 297
                               N KPN ++Y+ +ID   K G +     E+F +M   GV P
Sbjct: 614 IKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRE-DEARELFKEMKALGVIP 672

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
           D I++ SL+    R G W+ A+ LFNEMV  G+  D+ T++ L+D +CK  ++  A E++
Sbjct: 673 DVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELL 732

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
             M  +   PN VTY+T++ G     R+ +A  +F +M+ LG   D V+Y T++    + 
Sbjct: 733 EVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQT 792

Query: 418 GRFEEALLVCKEMES------SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           G  + AL + K+M S      +  + D ++Y+ ++ G  K G+ DE R +F++MKA  V 
Sbjct: 793 GNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVI 852

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           PN+++Y++LI  + + G  ++A  +F E    G++ + V YS +I   CK G ++ A+
Sbjct: 853 PNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 215/465 (46%), Gaps = 68/465 (14%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA----------SAMISILGR 205
           A  Y  L++ L   G  + A+Q        +E  ND G+            S +I  L +
Sbjct: 417 AITYGTLMKGLCQTGNINIALQ------LHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 470

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
             + D A+ +FE    +G    V +++ LI  +  SG  ++A  +FN M    ++P++ T
Sbjct: 471 DRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 530

Query: 266 YNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFN 323
            + +ID  C KG V   +  ++ + +++ G   D +T  +L+  +C +  + +A + LF 
Sbjct: 531 SSVLIDMLCKKGKVIEAN--KLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQ-LFL 587

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK------NISPNVVTYSTMID 377
           +M   G   ++ T  TL+  +C+   + +A E+   M +       N  PN ++YS +ID
Sbjct: 588 KMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIID 647

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K GR D+A  +F EMK LG+  D +SY +++  + + G++++A  +  EM   G++ 
Sbjct: 648 GLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQP 707

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  T++ L+    K+GK  E   + E M      PN +TY+TL+          EA Q+F
Sbjct: 708 DVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLF 767

Query: 498 REFKQAG-----------------------------------------LKADVVLYSALI 516
            + ++ G                                          K DV+ YS +I
Sbjct: 768 MKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIII 827

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           D LCK+G  + A  L  EM   G+ PNV++Y S+I  F RS   E
Sbjct: 828 DGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLE 872



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 218/488 (44%), Gaps = 37/488 (7%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           +S +I IL + GKV  A  + E  +  G    +  +S LI          EA  +F SM+
Sbjct: 57  SSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQ 116

Query: 256 RYNLKPNLVTYNAVIDA-CGKGGVDFKHVV--EIFDDMLRNGVQ--PDRITFNSLLAVCS 310
           +   +P+ +TY  ++   C  G ++    +  E+ +D  R G++  P  I+++ ++    
Sbjct: 117 KLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLC 176

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           +    + AR LF EM  +G+  D+ +Y +L+   C   + + A  +  EM    I P+V 
Sbjct: 177 KDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVT 236

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           T   +ID + K G++ +A  +   M   G  LD V+Y+T++       R  EA  +   M
Sbjct: 237 TSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSM 296

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD-------CVSPNLLTYSTLIDV 483
           +  G R DA+ Y  L+ G  + GK +    + ++M  D       C+ P++ T S LID+
Sbjct: 297 KKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDI 356

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K G   EA ++     Q G   D+V YS LI  LC    +  A  L   M K G RP+
Sbjct: 357 LCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPD 416

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
            +TY +++          C   ++   L   +E  N          D    G      + 
Sbjct: 417 AITYGTLMKGL-------CQTGNINIALQLHQEMLN----------DTGRYGIKCKPTLI 459

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
            +  ++ +   + ++E+  R+       +F++M    I P+V++++ +++       +E 
Sbjct: 460 SY-SIIIDGLCKDRREDEARE-------LFEEMKAQGIMPDVISYTTLIHGFCLSGKWEK 511

Query: 664 ASMLLEEL 671
           A  L  E+
Sbjct: 512 AKCLFNEM 519



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 161/280 (57%), Gaps = 13/280 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L + G+ D A+ +F+     G    V ++++LI  + RSG  ++A  +FN M  
Sbjct: 643 SIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 702

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
             ++P++ T++ +ID  C +G V   +  E+ + M++ G  P+ +T+ +L+  +C    +
Sbjct: 703 IGVQPDVTTFSVLIDMLCKEGKVIEAN--ELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 760

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA------KNISPN 368
            EA + LF +M   G   D+ TY TL+  +C+   +  A E+  +M +       N  P+
Sbjct: 761 SEATQ-LFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPD 819

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           V++YS +IDG  K GR D+A  +F EMK LG+  + +SY +++  + + G+ E+A  +  
Sbjct: 820 VISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFN 879

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           EM   G++ +AVTY+ ++ G+ K+G+ D  + +F++M+A+
Sbjct: 880 EMVDQGVQLNAVTYSVMIHGFCKEGQID--KALFQKMEAN 917



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 135/539 (25%), Positives = 240/539 (44%), Gaps = 69/539 (12%)

Query: 233 ALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDML 291
           A ++   R GY  + ++       Y+++P++ T + +ID  C +G V   +  E+ + M+
Sbjct: 31  AAMAGIMRRGYIPDIVT-------YSIRPDVTTSSMLIDILCKEGKVIEAN--ELLEVMI 81

Query: 292 RNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           + G   D +T+++L+  +C    + EA   LF  M   G   D  TY TL+  +C+   +
Sbjct: 82  QRGCILDIVTYSTLIKGLCMEHRISEATW-LFMSMQKLGCRPDAITYGTLMKGLCQTGNI 140

Query: 351 DLAFEIMAEMP------AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           ++A ++  EM            P +++YS +IDG  K  R D+A  +F EMK  G+  D 
Sbjct: 141 NIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDV 200

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           +SY +++  +   G++E+A  +  EM   GI+ D  T   L+  + K+GK  E   + E 
Sbjct: 201 ISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEV 260

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M       +++TYSTLI          EA Q+F   K+ G + D + Y  L+  LC+ G 
Sbjct: 261 MVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGK 320

Query: 525 VESAVSLLDEMTKEG-------IRPNVVTYNSIIDAFGRSATT-------------ECTV 564
           +  A+ L  EM  +        IRP+V T + +ID   +                  C +
Sbjct: 321 INIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCIL 380

Query: 565 DDVERDLGKQKESANLDAMCSQDD--------KDVQEAGRTDNQIIKVFGQLVAE--KAG 614
           D V         S  +  +C +            +Q+ G   + I   +G L+    + G
Sbjct: 381 DIVTY-------STLIKGLCMEHRISEATWLFMSMQKLGCRPDAI--TYGTLMKGLCQTG 431

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR-- 672
                 +  QE+L   G +     +K KP ++++S I++   +    ++A  L EE++  
Sbjct: 432 NINIALQLHQEMLNDTGRY----GIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQ 487

Query: 673 --LFDNQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
             + D   Y  + HG  +  +   W +A  LF+E+  +         + L DML   G+
Sbjct: 488 GIMPDVISYTTLIHGFCLSGK---WEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 543



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 15/245 (6%)

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST---------MIDGY 379
           G+  D FT+N L++ +C   +++     MA +  +   P++VTYS          +ID  
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K G++ +A  +   M   G  LD V+Y+T++       R  EA  +   M+  G R DA
Sbjct: 65  CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADC------VSPNLLTYSTLIDVYSKGGLYKEA 493
           +TY  L+ G  + G  +   ++ ++M  D         P L++YS +ID   K     EA
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            ++F+E K  G+  DV+ Y++LI   C +G  E A  L +EM   GI+P+V T   +ID 
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDM 244

Query: 554 FGRSA 558
           F +  
Sbjct: 245 FCKEG 249


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 193/379 (50%), Gaps = 5/379 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L ++G    A  + +    +G    V A++ +I +  +     EA+  F+ M  
Sbjct: 180 TTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVD 239

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
             + PN+VTY++++   C  G ++      +F  M+   V P+ +TF  L+  +C  G +
Sbjct: 240 QGIPPNVVTYSSILHGFCNLGQLN--EATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMI 297

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA R +F  M   G++ D +TY+ L+D  C  +QMD A ++   M  K  +P+V  Y+ 
Sbjct: 298 LEA-RRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNI 356

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I+G+ K+ RL++A  + SEM    +  D V+Y+T++  + + GR + A  + KEM S G
Sbjct: 357 LINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYG 416

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  D++TY+ LL G  K G  DE  R+ + M+   + P++  Y+ LI      G  + A 
Sbjct: 417 LLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAAR 476

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++F      G++  VV Y+ +I  L K GL   A  +  +M   G  PN  TYN  I  F
Sbjct: 477 ELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGF 536

Query: 555 GRSATTECTVDDVERDLGK 573
            R+      V  +E  +G+
Sbjct: 537 LRNGDPSNAVRLIEEMVGR 555



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 210/417 (50%), Gaps = 8/417 (1%)

Query: 138 DDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA- 196
           D V L D + K  F       YT +++ L   G  + A+Q      K EE+      +A 
Sbjct: 159 DAVKLFDEIGKMGFAP-SLITYTTIIKGLCKIGHTTNALQLLK---KMEEKGCKPDVVAY 214

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L +  + + A   F   +++G    V  +S+++  +   G   EA S+F  M  
Sbjct: 215 NTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIG 274

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
            N+ PN VT+  ++D   K G+  +    +F+ M  NGV+PD  T+++L+   C +  + 
Sbjct: 275 RNVMPNTVTFTILVDGLCKEGMILE-ARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMD 333

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA + LF+ MV +G    +  YN L++  CK  +++ A  +++EM  ++++P+ VTYST+
Sbjct: 334 EAQK-LFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTL 392

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G+ +AGR   A  +F EM   G+  D ++Y+ +L    K G  +EA  + K M+ S I
Sbjct: 393 MQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKI 452

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
                 YN L+ G    GK +  R +F  +    + P+++TY+ +I    K GL  EA +
Sbjct: 453 EPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACE 512

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           +FR+    G   +   Y+  I    +NG   +AV L++EM   G   +  T+  ++D
Sbjct: 513 MFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 215/448 (47%), Gaps = 37/448 (8%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVV-EI 286
           V  F+ L+ +  +  +    IS+   M   N++PN+ T   +I+       D  H     
Sbjct: 69  VVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSA 128

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
              M + G+QP  +TF +LL  +CS+  + +A + LF+E+   G    + TY T++  +C
Sbjct: 129 LGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVK-LFDEIGKMGFAPSLITYTTIIKGLC 187

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K      A +++ +M  K   P+VV Y+T+ID   K  R ++A+  FSEM   GI  + V
Sbjct: 188 KIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVV 247

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y+++L  +  LG+  EA  + K+M    +  + VT+  L+ G  K+G   E RR+FE M
Sbjct: 248 TYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMM 307

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             + V P+  TYS L+D Y       EA ++F      G    V +Y+ LI+  CK+  +
Sbjct: 308 TENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRL 367

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN------ 579
             A +LL EM    + P+ VTY++++  F ++   +     V + L K+  S        
Sbjct: 368 NEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQ-----VAQKLFKEMCSYGLLPDSI 422

Query: 580 -----LDAMCSQDDKDVQEAGR-----TDNQI---IKVFGQLVAEKAGQGKKENRCRQEI 626
                LD +C     D  EA R      +++I   I ++  L+      GK E   R+  
Sbjct: 423 TYSILLDGLCKHGHLD--EAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLE-AARE-- 477

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNA 654
                +F  +    I+P+VVT++ +++ 
Sbjct: 478 -----LFSNLFVKGIQPSVVTYTVMISG 500



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 169/337 (50%), Gaps = 4/337 (1%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G   T   F  L++         +A+ +F+ + +    P+L+TY  +I    K G    +
Sbjct: 136 GLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIG-HTTN 194

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            +++   M   G +PD + +N+++    +      A   F+EMV +GI  ++ TY+++L 
Sbjct: 195 ALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILH 254

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
             C   Q++ A  +  +M  +N+ PN VT++ ++DG  K G + +A  +F  M   G+  
Sbjct: 255 GFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEP 314

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D  +Y+ ++  Y    + +EA  +   M   G       YN L+ G+ K  + +E + + 
Sbjct: 315 DAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLL 374

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +M    ++P+ +TYSTL+  + + G  + A ++F+E    GL  D + YS L+D LCK+
Sbjct: 375 SEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKH 434

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGR 556
           G ++ A  LL  M +  I P++  YN +I     FG+
Sbjct: 435 GHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGK 471



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 210/448 (46%), Gaps = 43/448 (9%)

Query: 236 SAYGRSGYCQ---------EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           S+    G+C          +A++ FN +      P +V +N ++ +  K    +  V+ +
Sbjct: 33  SSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKK-HYSTVISL 91

Query: 287 FDDMLRNGVQPDRITFNSLL-AVC-SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
              M  + ++P+  T   L+  +C S       A +   +M   G+     T+ TLL+ +
Sbjct: 92  CKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGL 151

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C  A++  A ++  E+     +P+++TY+T+I G  K G   +AL +  +M+  G   D 
Sbjct: 152 CSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDV 211

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V+YNTV+    K  R  EA+    EM   GI  + VTY+++L G+   G+ +E   +F+Q
Sbjct: 212 VAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQ 271

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    V PN +T++ L+D   K G+  EA ++F    + G++ D   YSAL+D  C    
Sbjct: 272 MIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQ 331

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           ++ A  L D M  +G  P+V  YN +I+   +S           R L + K       + 
Sbjct: 332 MDEAQKLFDIMVGKGFAPSVRVYNILINGHCKS-----------RRLNEAKT-----LLS 375

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
              D+D+     T + +++ F Q     AG+ +   +          +F++M    + P+
Sbjct: 376 EMYDRDLTPDTVTYSTLMQGFCQ-----AGRPQVAQK----------LFKEMCSYGLLPD 420

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELR 672
            +T+S +L+   +    ++A  LL+ ++
Sbjct: 421 SITYSILLDGLCKHGHLDEAFRLLKAMQ 448



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 153/337 (45%), Gaps = 3/337 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ +L    N G+ ++A   F   + R    N      + ++  L + G +  A+ +FE 
Sbjct: 249 YSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVT--FTILVDGLCKEGMILEARRVFEM 306

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G     Y +SAL+  Y       EA  +F+ M      P++  YN +I+   K   
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSR- 365

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                  +  +M    + PD +T+++L+    + G  + A+ LF EM   G+  D  TY+
Sbjct: 366 RLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYS 425

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            LLD +CK   +D AF ++  M    I P++  Y+ +I G    G+L+ A  +FS +   
Sbjct: 426 ILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVK 485

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI    V+Y  ++S   K G   EA  + ++M  +G   ++ TYN  + G+ + G     
Sbjct: 486 GIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNA 545

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
            R+ E+M     S +  T+  L+D+ S   +    M+
Sbjct: 546 VRLIEEMVGRGFSADSSTFQMLLDLESNDEIISRFMR 582



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 144/343 (41%), Gaps = 68/343 (19%)

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
           NISP+ +T       Y     + DA+  F+++  +      V +N +L    K   +   
Sbjct: 29  NISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTV 88

Query: 424 LLVCKEMESSGIRKDA-------------------------------------VTYNALL 446
           + +CK+M+ S IR +                                      VT+  LL
Sbjct: 89  ISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLL 148

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G   + K  +  ++F+++     +P+L+TY+T+I    K G    A+Q+ ++ ++ G K
Sbjct: 149 NGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCK 208

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            DVV Y+ +ID+LCK+     A+    EM  +GI PNVVTY+SI+  F            
Sbjct: 209 PDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFC----------- 257

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
              +LG+  E+ +L           Q  GR        F  LV     +G         I
Sbjct: 258 ---NLGQLNEATSLFK---------QMIGRNVMPNTVTFTILVDGLCKEGM--------I 297

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
           L    VF+ M +  ++P+  T+SA+++     +  ++A  L +
Sbjct: 298 LEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFD 340


>gi|449459510|ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cucumis sativus]
 gi|449530101|ref|XP_004172035.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cucumis sativus]
          Length = 680

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 151/639 (23%), Positives = 290/639 (45%), Gaps = 61/639 (9%)

Query: 47  KVSLTKPPLSPSPRNAPKPAATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVS 106
           KV   K  + P  R    P  T+++ + +   +   +P   S + L P    +RS R   
Sbjct: 30  KVRFNKIKIKPRTR---IPIFTASSSSTSKDIWRRQTPSEKSTTTLLPQ-KYQRSGR--- 82

Query: 107 KMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLREL 166
                RP+ +    HS+  +E L  +    +++  L  +L  ++ +        F++  L
Sbjct: 83  -----RPRESSHLDHSIDMDELLASIGQ-TKNEQELYSVLSPYKGRELSM---RFMVSLL 133

Query: 167 GNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGN 226
               +W +++    + +  E          + ++  + R  + +LA  +F+         
Sbjct: 134 SRESDWQRSLAILDW-INEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAA 192

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
             Y +S LI+ +G+ G    A+S    M++  +  +LV Y+ +I+   K   D+   + I
Sbjct: 193 DRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKL-CDYSKAISI 251

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F  + R+G+ PD + +N+++ V  +  L+  AR L  EM    +  D  +Y+TLL+   +
Sbjct: 252 FSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVE 311

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +   A  +++EM   N   ++ T + MID Y +   + +A  +F  M+ +GI  + VS
Sbjct: 312 NEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVS 371

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNT+L +Y +   F EA+ + + M+   I+++ VTYN ++  YGK  ++++   + + M+
Sbjct: 372 YNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQ 431

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + PN +TYST+I ++ K G    +  +F++ + +G + D VLY  +I A  K GLV 
Sbjct: 432 KRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVG 491

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE--CTVDDVERDLGKQKESANLDAMC 584
            A  LL E+ +    P+ +   + I    ++   E    V     D G+ K+        
Sbjct: 492 HAKRLLHELKQ----PDNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKD-------- 539

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
                            I VF  ++   +   K +N        +L VF+KM  +   PN
Sbjct: 540 -----------------ISVFECMIDLFSRNKKHKN--------VLEVFEKMRNVGHFPN 574

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVY 679
               + +LNA  +   F+ A  L  E++    +F ++V+
Sbjct: 575 SDVIALVLNAYGKLRDFDTADALYMEMQEEGCVFTDEVH 613



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/350 (19%), Positives = 137/350 (39%), Gaps = 48/350 (13%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +LR  G    + +AI  F    ++E ++N      + MI I G+  + + A N+ + 
Sbjct: 372 YNTILRVYGEAELFGEAIHLFRLMQRKEIKQN--VVTYNTMIKIYGKTLEHEKATNLVQD 429

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G       +S +IS +G++G    +  +F  ++    + + V Y  +I A  K G+
Sbjct: 430 MQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGL 489

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
              H   +  ++     QPD I   + + + ++ G  E A  +F +    G  +DI  + 
Sbjct: 490 -VGHAKRLLHEL----KQPDNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKDISVFE 544

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            ++D   +  +     E+  +M      PN    + +++ Y K    D A  ++ EM+  
Sbjct: 545 CMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVLNAYGKLRDFDTADALYMEMQ-- 602

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
                                           E   +  D V +  +L  YG +  Y  +
Sbjct: 603 --------------------------------EEGCVFTDEVHFQ-MLSLYGARNDYKRL 629

Query: 459 RRMFEQMKADCVSPNL---LTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
             +FE++ +D   PN+     +  +  +Y +G   K+A +I     +  +
Sbjct: 630 ESLFERLDSD---PNINKKELHLVVASIYERGNRSKDASRIINRMNKIAI 676



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 47/234 (20%), Positives = 95/234 (40%), Gaps = 34/234 (14%)

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGL-KADVVLYSALIDALCKNGLVESAVSLLD 533
           L+   ++ + S+   ++ ++ I     +  L    V  Y+ ++  + +    E A  L D
Sbjct: 124 LSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFD 183

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
           EM +  +  +  TY+++I  FG+                        DA  S   K  Q+
Sbjct: 184 EMRQRALAADRYTYSTLITYFGKEGM--------------------FDAALSWLQKMEQD 223

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
                    +V G LV            C  +    + +F ++ +  I P++V ++ ++N
Sbjct: 224 ---------RVSGDLVLYSNLIELSRKLC--DYSKAISIFSRLKRSGITPDIVAYNTMIN 272

Query: 654 ACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL--MGYRDNIWVQALSLFDEVK 705
              +   F +A  LL+E+R  D     V++  L  M   +  +++ALS+  E+K
Sbjct: 273 VFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMK 326


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 218/449 (48%), Gaps = 43/449 (9%)

Query: 148 KFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLG 207
           KF  KLC       L R   +   + +  + F + V    + +D+  +   +   L R  
Sbjct: 142 KFVEKLCD-----MLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLA--LKRSD 194

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           ++ ++   F+  +      TVY+ + +I    + G  + A  +   M    +KPN+VTYN
Sbjct: 195 QMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYN 254

Query: 268 AVIDACGKGGVDFKHVVE-----------------------------------IFDDMLR 292
            +++A  K  +DF+ V E                                   +F+ ML 
Sbjct: 255 TLVNAYIKI-MDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLE 313

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
            GV+ D   F S+++   + G  + A  LF+E+  RG+  +  TY  L+   C   Q+D 
Sbjct: 314 RGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDA 373

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A  ++ EM ++ +  N+V ++T+I+GY K G +D+AL M   M+  G   D  +YNT+  
Sbjct: 374 AEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAG 433

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              KL R EEA      M   G+  +AV++  ++  + K+G   E  R+F+ MK     P
Sbjct: 434 GLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKP 493

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           N++TY+TLID YSK G  KEA ++  E +  G+ +D+  Y+ L+   C  G VE A++LL
Sbjct: 494 NVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLL 553

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +E+ ++G+  ++VTY +II    +   +E
Sbjct: 554 NEVCRKGLAISIVTYTAIISGLSKEGRSE 582



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 176/327 (53%), Gaps = 5/327 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I   G  GK+  A+ +FE  L  G    ++ F+++IS   + G  + A ++F+ +  
Sbjct: 289 TLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNE 348

Query: 257 YNLKPNLVTYNAVID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
             L  N  TY A+I   C  G +D   +  + ++M   G+  + + FN+L+   C +G +
Sbjct: 349 RGLVANAHTYGALIHGTCNSGQLDAAEM--LVNEMQSQGLDMNLVIFNTLINGYCKKGMI 406

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA R + + M  +G + DIFTYNT+   +CK  + + A   +  M  K + PN V+++ 
Sbjct: 407 DEALR-MQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTI 465

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           MID + K G L +A  +F +MK  G   + V+YNT++  Y+K G+ +EA  +  EMES G
Sbjct: 466 MIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIG 525

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  D  TY  L+ G    GK +E   +  ++    ++ +++TY+ +I   SK G  +EA 
Sbjct: 526 MTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAF 585

Query: 495 QIFREFKQAGLKADVVLYSALIDALCK 521
           +++ E   AGL  D  +Y++L+  L K
Sbjct: 586 RLYDEMMAAGLTPDDRVYTSLVANLHK 612



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 172/328 (52%), Gaps = 7/328 (2%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
           A  YT L+   G+ G+ ++A + F   ++R    +    + +++IS   +LG +  A  +
Sbjct: 285 AATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIH--VFTSIISWQCKLGNMKRAFAL 342

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CG 274
           F+     G     + + ALI     SG    A  + N M+   L  NLV +N +I+  C 
Sbjct: 343 FDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCK 402

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQD 333
           KG +D    + + D M + G + D  T+N++   +C      EA R LF  MV +G+D +
Sbjct: 403 KGMID--EALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFT-MVEKGVDPN 459

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             ++  ++D  CK   +  A  +  +M  K   PNVVTY+T+IDGY+K G+L +A  +  
Sbjct: 460 AVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKD 519

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           EM+ +G+  D  +Y T++      G+ EEAL +  E+   G+    VTY A++ G  K+G
Sbjct: 520 EMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEG 579

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           + +E  R++++M A  ++P+   Y++L+
Sbjct: 580 RSEEAFRLYDEMMAAGLTPDDRVYTSLV 607



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 17/196 (8%)

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
           KN+  +V  + ++ID            N F E KF+    D      +  +Y     FEE
Sbjct: 121 KNLRCSVSDFVSLID------------NRFHEPKFVEKLCD-----MLFRVYVDNSMFEE 163

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
              V   M  +G++ D  +    L    +  +       F++M    V   + + + +ID
Sbjct: 164 GFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVID 223

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
              K G  + A  +  E    G+K +VV Y+ L++A  K    E    +L  M  + +  
Sbjct: 224 GLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVY 283

Query: 543 NVVTYNSIIDAFGRSA 558
           N  TY  +I+ +G S 
Sbjct: 284 NAATYTLLIEWYGSSG 299


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 241/502 (48%), Gaps = 49/502 (9%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L + +I  L R G++  A  ++   +N+ +      ++ L+    ++   ++A+ V   M
Sbjct: 7   LHNVVIGGLCRAGRLRHALGVYRQ-MNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEM 65

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL---LAVCS 310
                 P+  T   V+ + C    VD     E+ ++ML  G+  + IT+++L   L  C 
Sbjct: 66  VSARHVPDNTTLTVVVQSLCLGDRVDDAR--ELVEEMLHRGMAANAITYSALVDGLCKCE 123

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           R    + A  L   M  RG    + TYN+++   C+  ++D A   M +M A+   P+++
Sbjct: 124 R---LDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TY+ +I G+ K+  +   L +  E+   G   D V+Y+TV+    K GR  +A+ + +EM
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
             +     A+TYN+L+GGY + G  DE  R+  +M  D  +P+++TY+TL+  + K G  
Sbjct: 241 SCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRL 297

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            +A ++F++     L  DVV +++L+D LC  G +E A+ LL+E+T+ G  P + TYN +
Sbjct: 298 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCV 357

Query: 551 IDAFGRS----ATTECTVDDVERDLGKQKESAN-LDAMCSQDDKDVQEAGRTDNQIIKVF 605
           +D + ++       E   D   R       + N L A C +       AGRTD Q ++  
Sbjct: 358 VDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCR-------AGRTD-QALQYL 409

Query: 606 GQLVAEKAGQGKKENRCRQEI---------LCILG-------VFQKMHKLKIKPNVVTFS 649
            QL +E          C   +         LC  G        +++M +    P   TF+
Sbjct: 410 DQLNSEG-------GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFA 462

Query: 650 AILNACSRCNSFEDASMLLEEL 671
            ++ A  + +  + A  LLEE+
Sbjct: 463 TVVFALCKAHQPQQAHELLEEM 484



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 206/425 (48%), Gaps = 25/425 (5%)

Query: 157 DDYTFLLRELGNRGEWSKAIQCFAF--AVKREERKNDQGKLASAM--------------- 199
           DD   L+ E+ +RG  + AI   A    + + ER ++   L   M               
Sbjct: 91  DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSI 150

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I+   R  +VD A    E  + EG    +  ++ALI  + +S      + +   + R   
Sbjct: 151 ITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGF 210

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            P++VTY+ VID   K G   +  V+IF++M      P  IT+NSL+    R G  + A 
Sbjct: 211 TPDIVTYSTVIDGLCKAG-RLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAI 266

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            L  +MV      D+ TY TL+ A CK  ++D A+E+  +M A  +SP+VVT+++++DG 
Sbjct: 267 RLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGL 326

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
              GR++DAL +  E+   G      +YN V+  Y K  +  +A  +  +  S G   + 
Sbjct: 327 CGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNT 386

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKAD---CVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
           VTYN L+ G  + G+ D+  +  +Q+ ++   C + ++  Y+ ++D   + G   +A+Q 
Sbjct: 387 VTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPT-SVAMYAIILDALCRDGRTDDAVQF 445

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           + E  Q G       ++ ++ ALCK    + A  LL+EM K G  P   T ++++ A+ R
Sbjct: 446 YEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCR 505

Query: 557 SATTE 561
           +   +
Sbjct: 506 AGMIQ 510



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 146/308 (47%), Gaps = 8/308 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L + G++  A +IFE         T   +++LI  Y R+G   EAI +   M  
Sbjct: 218 STVIDGLCKAGRLRDAVDIFE---EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 274

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               P++VTY  ++ A C  G +D  +  E+F  M+ N + PD +TF SL+      G  
Sbjct: 275 DKCAPDVVTYTTLMSAFCKMGRLDDAY--ELFQQMVANKLSPDVVTFTSLVDGLCGEGRM 332

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  L  E+  RG    I+TYN ++D  CK  Q+  A E++A+  ++   PN VTY+ +
Sbjct: 333 EDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNIL 392

Query: 376 IDGYAKAGRLDDALNMFSEMKFLG--IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           + G  +AGR D AL    ++   G         Y  +L    + GR ++A+   +EM   
Sbjct: 393 VAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQR 452

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G    A T+  ++    K  +  +   + E+M     +P   T   ++  Y + G+ ++A
Sbjct: 453 GYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 512

Query: 494 MQIFREFK 501
            ++  E +
Sbjct: 513 DELASELR 520



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 38/238 (15%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S   ++G++D A  +F+  +       V  F++L+      G  ++A+ +   + R
Sbjct: 285 TTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR 344

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P + TYN V+D   K     +   E+  D    G  P+ +T+N L+A C R G  +
Sbjct: 345 RGCPPTIYTYNCVVDGYCKAN-QVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTD 403

Query: 317 AARN-------------------------------------LFNEMVHRGIDQDIFTYNT 339
            A                                        + EM+ RG      T+ T
Sbjct: 404 QALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFAT 463

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           ++ A+CK  Q   A E++ EM     +P   T   ++  Y +AG +  A  + SE++ 
Sbjct: 464 VVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRL 521


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 237/487 (48%), Gaps = 45/487 (9%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           V  ++  F  A+  G    V  F+ +I  Y      ++A+   N M +YN  P+ VTYN 
Sbjct: 189 VSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNT 248

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           ++DA C KG +      ++  DM   G+ P+R T+N L+   C  G L EAA N+   M 
Sbjct: 249 ILDALCKKGRLG--DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAA-NVIELMT 305

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
              +  D++TYN L++ +C   +++ AF++  EM    + P+VV+Y+T+I+G  +  ++ 
Sbjct: 306 QNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKIS 365

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A  +  EM   G+  + V++N ++  Y K G+ ++A     +ME SG   D VTYN L+
Sbjct: 366 EAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLI 425

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GY K G   E  R  ++M    +  + +T +T++    +    +EA ++    ++ G  
Sbjct: 426 NGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYF 485

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            D V Y  LI    K+G V+ A+ L DEM ++ I P+ VTYN II    +   TE  +  
Sbjct: 486 IDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISK 545

Query: 567 ----VERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
               +E  L   + + N  L   C +   DV++A +  N+++                EN
Sbjct: 546 LNELLESGLLPDETTYNTILHGYCREG--DVEKAFQFHNKMV----------------EN 587

Query: 621 RCRQEI---------LCILGVFQKMHKL------KIKP-NVVTFSAILNACSRCNSFEDA 664
             + ++         LC+ G+ +K  KL      K K  + VT++ ++ +  +    +DA
Sbjct: 588 SFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDA 647

Query: 665 SMLLEEL 671
             LL E+
Sbjct: 648 FNLLSEM 654



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 197/424 (46%), Gaps = 46/424 (10%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++G +  A N+ E          V+ ++ LI+     G  +EA  + + M+   L P++V
Sbjct: 290 KMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVV 349

Query: 265 TYNAVIDACGKGGVDFKHVVEIF---DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +YN +I+ C    +++  + E F   ++M   GV+P+ +T N ++    + G  + A N 
Sbjct: 350 SYNTLINGC----LEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNT 405

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT---------- 371
             +M   G   D  TYNTL++  CK   M  AF  M EM  KN+  + VT          
Sbjct: 406 ITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465

Query: 372 -------------------------YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
                                    Y T+I GY K G +D AL ++ EMK   I    V+
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN ++    + G+ E+A+    E+  SG+  D  TYN +L GY ++G  ++  +   +M 
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            +   P++ T + L+      G+ ++A+++F  +   G   D V Y+ LI +LCK G ++
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLD 645

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A +LL EM ++ + P+  TYN+II A   S      + + E  + K  E   L     Q
Sbjct: 646 DAFNLLSEMEEKELGPDHYTYNAIITALTDSG----RIREAEEFMSKMLEKGXLPXQVLQ 701

Query: 587 DDKD 590
            D +
Sbjct: 702 LDXN 705



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 215/459 (46%), Gaps = 42/459 (9%)

Query: 235 ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC----GKGGVDFKHVVEIFDDM 290
           I AY +SG    A  +F  MKR  L+PNL+T N ++++         V F    E F+D 
Sbjct: 142 IGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSR--EAFNDA 199

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           ++ G+ P+  TFN ++        ++ A    N M       D  TYNT+LDA+CK  ++
Sbjct: 200 IKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRL 259

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
             A +++ +M ++ + PN  TY+ ++ GY K G L +A N+   M    +  D  +YN +
Sbjct: 260 GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNML 319

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           ++     GR EEA  +  EME+  +  D V+YN L+ G  +  K  E  ++ E+M    V
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            PN +T++ ++  Y K G   +A     + +++G   D V Y+ LI+  CK G +  A  
Sbjct: 380 KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFR 439

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
            +DEM ++ ++ + VT N+I+    R                K +E+  L +   +    
Sbjct: 440 TMDEMGRKNMKMDSVTLNTILRTLCREK--------------KLEEAYKLLSSARKRGYF 485

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
           + E           +G L+    G  K  N  R      L ++ +M + +I P+ VT++ 
Sbjct: 486 IDEVS---------YGTLI---VGYFKDGNVDRA-----LKLWDEMKEKEIIPSTVTYNC 528

Query: 651 ILNACSRCNSFEDA----SMLLEELRLFDNQVYG-VAHG 684
           I+    +C   E A    + LLE   L D   Y  + HG
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHG 567



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 166/358 (46%), Gaps = 24/358 (6%)

Query: 167 GNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGN 226
           GN GE  + +      + R+  K D   L + ++  L R  K++ A  +  +A   GY  
Sbjct: 432 GNMGEAFRTMD----EMGRKNMKMDSVTL-NTILRTLCREKKLEEAYKLLSSARKRGYFI 486

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA---CGKGGVDFKHV 283
              ++  LI  Y + G    A+ +++ MK   + P+ VTYN +I     CGK     +  
Sbjct: 487 DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKT----EQA 542

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           +   +++L +G+ PD  T+N++L    R G  E A    N+MV      D+FT N LL  
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +C    ++ A ++     +K  + + VTY+T+I    K GRLDDA N+ SEM+   +G D
Sbjct: 603 LCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPD 662

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +YN +++     GR  EA    +E  S  + K  +    L        + D    +  
Sbjct: 663 HYTYNAIITALTDSGRIREA----EEFMSKMLEKGXLPXQVL--------QLDXNETVVT 710

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
              ++    + + YS  I      G YK+AM+IF E KQ G+  D   Y  L+D L K
Sbjct: 711 SETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 178/393 (45%), Gaps = 15/393 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS----ILGRL--GKVDLA 212
           Y  L+  L N G   +A +       R+E +N   KL   ++S    I G L   K+  A
Sbjct: 316 YNMLINGLCNEGRIEEAFKL------RDEMEN--LKLLPDVVSYNTLINGCLEWSKISEA 367

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
             + E    +G        + ++  Y + G   +A +    M+     P+ VTYN +I+ 
Sbjct: 368 FKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLING 427

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
             K G +        D+M R  ++ D +T N++L    R    E A  L +    RG   
Sbjct: 428 YCKAG-NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFI 486

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D  +Y TL+    K   +D A ++  EM  K I P+ VTY+ +I G  + G+ + A++  
Sbjct: 487 DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKL 546

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           +E+   G+  D  +YNT+L  Y + G  E+A     +M  +  + D  T N LL G   +
Sbjct: 547 NELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCME 606

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G  ++  ++F    +   + + +TY+TLI    K G   +A  +  E ++  L  D   Y
Sbjct: 607 GMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTY 666

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           +A+I AL  +G +  A   + +M ++G  P  V
Sbjct: 667 NAIITALTDSGRIREAEEFMSKMLEKGXLPXQV 699



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/425 (23%), Positives = 173/425 (40%), Gaps = 59/425 (13%)

Query: 171 EWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
           EWSK  + F    +  E+      +  + M+    + GK+D A N        G+     
Sbjct: 360 EWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV 419

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV-------------------- 269
            ++ LI+ Y ++G   EA    + M R N+K + VT N +                    
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSA 479

Query: 270 ------IDACGKGGV--------DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
                 ID    G +        +    ++++D+M    + P  +T+N ++    + G  
Sbjct: 480 RKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKT 539

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A +  NE++  G+  D  TYNT+L   C+   ++ AF+   +M   +  P+V T + +
Sbjct: 540 EQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNIL 599

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G    G L+ AL +F+     G  +D V+YNT+++   K GR ++A  +  EME   +
Sbjct: 600 LRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKEL 659

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  TYNA++      G+  E      +M                    KG L  + +Q
Sbjct: 660 GPDHYTYNAIITALTDSGRIREAEEFMSKM------------------LEKGXLPXQVLQ 701

Query: 496 ------IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
                 +          +  V YS  I  LC  G  + A+ +  E  ++GI  +  TY +
Sbjct: 702 LDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYIN 761

Query: 550 IIDAF 554
           ++D  
Sbjct: 762 LMDGL 766



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 186/435 (42%), Gaps = 71/435 (16%)

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID-------------------- 377
           +T + A  +  Q   AF+I  +M    + PN++T +T+++                    
Sbjct: 139 DTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFND 198

Query: 378 ------------------GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
                             GY    +  DA+   + M       D V+YNT+L    K GR
Sbjct: 199 AIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGR 258

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
             +A  +  +M+S G+  +  TYN L+ GY K G   E   + E M  + + P++ TY+ 
Sbjct: 259 LGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNM 318

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LI+     G  +EA ++  E +   L  DVV Y+ LI+   +   +  A  LL+EM+++G
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           ++PN VT+N ++  + +    E  +DD    + K +ES      C            T N
Sbjct: 379 VKPNAVTHNIMVKWYCK----EGKMDDASNTITKMEESG-FSPDCV-----------TYN 422

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
            +I  +      KAG   +  R   E          M +  +K + VT + IL    R  
Sbjct: 423 TLINGYC-----KAGNMGEAFRTMDE----------MGRKNMKMDSVTLNTILRTLCREK 467

Query: 660 SFEDASMLLEELRLFDNQVYGVAHG-LLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYN 717
             E+A  LL   R     +  V++G L++GY +D    +AL L+DE+K  +   ++  YN
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527

Query: 718 ALTDMLWHFGQKRGA 732
            +   L   G+   A
Sbjct: 528 CIIGGLCQCGKTEQA 542



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 57/272 (20%), Positives = 106/272 (38%), Gaps = 62/272 (22%)

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL---------- 519
            SP+     T I  Y + G    A QIF++ K+  L+ +++  + L+++L          
Sbjct: 131 TSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVS 190

Query: 520 ----------------------------CKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
                                       C     + AV  L+ M K    P+ VTYN+I+
Sbjct: 191 FSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTIL 250

Query: 552 DAFGRSA----TTECTVDDVERDLGKQKESANL--DAMCS----QDDKDVQEAGRTDNQI 601
           DA  +        +  +D   R L   + + N+     C     ++  +V E    +N +
Sbjct: 251 DALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310

Query: 602 IKV--FGQLVAEKAGQGKKEN--RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
             V  +  L+     +G+ E   + R E          M  LK+ P+VV+++ ++N C  
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDE----------MENLKLLPDVVSYNTLINGCLE 360

Query: 658 CNSFEDASMLLEELRLFDNQVYGVAHGLLMGY 689
            +   +A  LLEE+     +   V H +++ +
Sbjct: 361 WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKW 392


>gi|225452658|ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic [Vitis vinifera]
 gi|296087770|emb|CBI35026.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 141/578 (24%), Positives = 269/578 (46%), Gaps = 45/578 (7%)

Query: 106 SKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRE 165
           S+ H  R +  +   HSV  +E L  ++  + ++  L  ++  ++ +        F++  
Sbjct: 73  SRQHRPRKQRVVHLDHSVDMDELLASISQTS-NEQELYSLMSPYKGRQLSI---RFMVSL 128

Query: 166 LGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYG 225
           L    +W +++    + +  E   +      + +I  + R  + +LA  +FE        
Sbjct: 129 LSREPDWQRSLALLDW-INEEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALA 187

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
              Y +S LI+ +G+ G    A+S    M++  +  +LV Y+ +I+   K   D+   + 
Sbjct: 188 PDRYTYSTLITHFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRKL-CDYSKAIS 246

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           IF  + R+G+ PD + +NS++ V  +  L+  AR L  EM   G+  D  +Y+TLL    
Sbjct: 247 IFSRLKRSGISPDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYV 306

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           +  +   A  + +EM       ++ T + MID Y +     +A  +F  M+ +GI    V
Sbjct: 307 ENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIV 366

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           SYNT+L +Y +   F EA+ + + M+   I ++ VTYN ++  YGK  ++++   + ++M
Sbjct: 367 SYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEM 426

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           +   + PN +TYST+I ++ K G    A  +F++ + +G++ D VLY  +I A  + GLV
Sbjct: 427 QNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLV 486

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
             A  LL E+     RP+ +   + I     +              G+ +E+  +     
Sbjct: 487 AHAKRLLHELK----RPDNIPRETAITILAGA--------------GRIEEATWV----- 523

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
              +   +AG   +  I VFG ++   +   K  N        ++ VF KM      P+ 
Sbjct: 524 --FRQAFDAGEVKD--ITVFGCMIDLFSRNRKHTN--------VIEVFDKMRGAGYFPDS 571

Query: 646 VTFSAILNACSRCNSFEDASMLLEELR----LFDNQVY 679
              + +LNAC +   FE A  + +E+     +F ++V+
Sbjct: 572 NVIALVLNACGKLREFEKADAIYKEMEEEGCVFSDEVH 609



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 186/392 (47%), Gaps = 31/392 (7%)

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           P    +N ++    R   WE A  LF EM  R +  D +TY+TL+    K    D A   
Sbjct: 153 PSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDSALSW 212

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           + +M    +S ++V YS +I+   K      A+++FS +K  GI  D V+YN++++++ K
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGK 272

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
              F EA L+  EM + G+  D V+Y+ LL  Y + GKY E   +F +M       +L T
Sbjct: 273 AKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTT 332

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
            + +IDVY +  + KEA ++F   ++ G++  +V Y+ L+    +  L   A+ L   M 
Sbjct: 333 CNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQ 392

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
           ++ I  NVVTYN++I  +G+S   E   + V+                   ++ ++    
Sbjct: 393 RKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQ----------------EMQNRGIEPNAI 436

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
           T + II ++     +KAG   K +R          +FQK+    I+ + V +  ++ A  
Sbjct: 437 TYSTIISIW-----DKAG---KLDRAAM-------LFQKLRSSGIEIDQVLYQTMIVAYE 481

Query: 657 RCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
           R      A  LL EL+  DN     A  +L G
Sbjct: 482 RAGLVAHAKRLLHELKRPDNIPRETAITILAG 513



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/382 (22%), Positives = 171/382 (44%), Gaps = 42/382 (10%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ LL      G++ +A+  F+     E R        + MI + G+L     A  +F +
Sbjct: 298 YSTLLSMYVENGKYVEALSVFS--EMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWS 355

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G    + +++ L+  YG +    EAI +F  M+R +++ N+VTYN +I   GK  +
Sbjct: 356 MRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKS-L 414

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           + +    +  +M   G++P+ IT+++++++  + G  + A  LF ++   GI+ D   Y 
Sbjct: 415 EHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQ 474

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISP------------------------------- 367
           T++ A  +   +  A  ++ E+   +  P                               
Sbjct: 475 TMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAGAGRIEEATWVFRQAFDAGEVK 534

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           ++  +  MID +++  +  + + +F +M+  G   D      VL+   KL  FE+A  + 
Sbjct: 535 DITVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLNACGKLREFEKADAIY 594

Query: 428 KEMESSG-IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL---LTYSTLIDV 483
           KEME  G +  D V +  +L  YG +G +  V  +FE++ +D   PN+     +  +  +
Sbjct: 595 KEMEEEGCVFSDEVHFQ-MLSLYGARGDFQMVDSLFERLDSD---PNINKKELHLVVASI 650

Query: 484 YSKGGLYKEAMQIFREFKQAGL 505
           Y +     +A QI    ++ G+
Sbjct: 651 YERANRLNDASQIMNRMRERGI 672


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 225/481 (46%), Gaps = 9/481 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + M++   ++G +  A          G     + +++LI  Y R+     A  VFN M  
Sbjct: 218 NTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPN 277

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              + N V+Y  +I   C  G +D    + +F  M  +   P   T+  ++         
Sbjct: 278 KGCRRNEVSYTTIIHGLCEAGRID--EGISLFKKMREDDCYPTVRTYTVIIHALFGNDRN 335

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
               +LFNEM  R  + ++ TY  ++DA+CK  ++D +  I+ EM  K + P+VVTY+ +
Sbjct: 336 LEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNAL 395

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I GY + GR++ AL +   M+      +  +YN ++  ++K     +A+ +  +M  S +
Sbjct: 396 IRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKL 455

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
               VTYN+L+    K G +D   ++ + +K + + P+  TYS  ID   K    +EA  
Sbjct: 456 TPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACD 515

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F   K+ G+KA+ V+Y+ALID  CK G ++ A+SLL+ M  E   PN  TYNS+I    
Sbjct: 516 LFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVC 575

Query: 556 RSATTECTVDDVER--DLGKQKESANLDAMCSQ--DDKDVQEAGRTDNQIIKVFGQLVAE 611
           +    +  +  VE    +G +   A    +  +   + D   A R  NQ++  FG     
Sbjct: 576 KEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVS-FGHKPDV 634

Query: 612 KAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                     C    +    G+  +M +  + P+ +T++ +++A  R     DA  +L+ 
Sbjct: 635 YTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKR 694

Query: 671 L 671
           +
Sbjct: 695 M 695



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 184/372 (49%), Gaps = 3/372 (0%)

Query: 181 FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           F   RE          + M+  + +  K+D ++ I    + +G   +V  ++ALI  Y  
Sbjct: 342 FNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCE 401

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH-VVEIFDDMLRNGVQPDR 299
            G  + A+ +   M+  N +PN  TYN +I  CG       H  + +   ML + + P  
Sbjct: 402 EGRIEAALEILGLMESNNCRPNERTYNELI--CGFSKRKHVHKAMTLLSKMLESKLTPSL 459

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           +T+NSL+ V  + G +++A  L + +   G+  D +TY+  +D +CK  +M+ A ++   
Sbjct: 460 VTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNS 519

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           +  K I  N V Y+ +IDG+ KAG++D+A+++   M       +  +YN+++    K G+
Sbjct: 520 LKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGK 579

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            +E L + + M   G++    TY  L+    ++G +D   R+F QM +    P++ TY+ 
Sbjct: 580 VQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTA 639

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
            I  Y   G  KEA  +     +AG+  D + Y+ LI A  + GL   A ++L  M   G
Sbjct: 640 FIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAG 699

Query: 540 IRPNVVTYNSII 551
             P+   +N++I
Sbjct: 700 CDPSHPIWNNLI 711



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 106/447 (23%), Positives = 200/447 (44%), Gaps = 71/447 (15%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           ++ +ML + + P+  T N+++   S+ G    A    +++   G+  D FTY +L+   C
Sbjct: 201 VYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYC 260

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK--------- 396
           +   ++ A+++   MP K    N V+Y+T+I G  +AGR+D+ +++F +M+         
Sbjct: 261 RNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVR 320

Query: 397 ------FLGIGLDRV--------------------SYNTVLSIYAKLGRFEEALLVCKEM 430
                     G DR                     +Y  ++    K  + +E+  +  EM
Sbjct: 321 TYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEM 380

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
              G+    VTYNAL+ GY ++G+ +    +   M+++   PN  TY+ LI  +SK    
Sbjct: 381 MEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHV 440

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            +AM +  +  ++ L   +V Y++LI   CK G  +SA  LLD + + G+ P+  TY+  
Sbjct: 441 HKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVF 500

Query: 551 IDAFGRSATTE--CTVDDVERDLG-KQKE---SANLDAMCSQDDKDVQEAGRTDNQI--- 601
           ID   +S   E  C + +  ++ G K  E   +A +D  C        +AG+ D  I   
Sbjct: 501 IDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHC--------KAGKIDEAISLL 552

Query: 602 -----------IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
                         +  L+     +GK +          L + + M K+ +KP V T++ 
Sbjct: 553 ERMHSEDCLPNSSTYNSLIYGVCKEGKVQEG--------LSMVENMSKMGVKPTVATYTI 604

Query: 651 ILNACSRCNSFEDASMLLEELRLFDNQ 677
           ++    R   F+ A+ +  ++  F ++
Sbjct: 605 LIEEMLREGDFDHANRVFNQMVSFGHK 631



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/423 (23%), Positives = 192/423 (45%), Gaps = 46/423 (10%)

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           +YN LL  + +   +D    +  EM    I PN+ T +TM++ Y+K G + +A    S++
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G+  D  +Y +++  Y +      A  V   M + G R++ V+Y  ++ G  + G+ 
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           DE   +F++M+ D   P + TY+ +I          E M +F E ++   + +V  Y+ +
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVM 360

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           +DA+CK   ++ +  +L+EM ++G+ P+VVTYN++I  +      E              
Sbjct: 361 VDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIE-------------- 406

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
             A L+ +   +  + +   RT N++I  F +               R+ +   + +  K
Sbjct: 407 --AALEILGLMESNNCRPNERTYNELICGFSK---------------RKHVHKAMTLLSK 449

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRD 691
           M + K+ P++VT++++++   +   F+ A  LL+ L+    + D   Y V    L   + 
Sbjct: 450 MLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLC--KS 507

Query: 692 NIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSE 751
               +A  LF+ +K          Y AL D     G  +  ++     +   + E + SE
Sbjct: 508 KRMEEACDLFNSLKEKGIKANEVMYTALID-----GHCKAGKI----DEAISLLERMHSE 558

Query: 752 SCL 754
            CL
Sbjct: 559 DCL 561



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 201/446 (45%), Gaps = 32/446 (7%)

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           ++N LL + +R  + +  + ++ EM++  I  +I+T NT+++A  K   +  A   ++++
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
               +SP+  TY+++I GY +   ++ A  +F+ M   G   + VSY T++    + GR 
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           +E + + K+M          TY  ++       +  E   +F +M+     PN+ TY+ +
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVM 360

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           +D   K     E+ +I  E  + GL   VV Y+ALI   C+ G +E+A+ +L  M     
Sbjct: 361 VDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNC 420

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK-DVQ-EAGRTD 598
           RPN  TYN +I  F +       V      L K  ES    ++ + +    VQ +AG  D
Sbjct: 421 RPNERTYNELICGFSKRK----HVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFD 476

Query: 599 N-----QIIKVFGQLVAEKAGQGKKENRC---RQEILCILGVFQKMHKLKIKPNVVTFSA 650
           +      ++K  G +  +       +  C   R E  C L  F  + +  IK N V ++A
Sbjct: 477 SAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDL--FNSLKEKGIKANEVMYTA 534

Query: 651 ILNACSRCNSFEDASMLLEELR---------LFDNQVYGVAHGLLMGYRDNIWVQALSLF 701
           +++   +    ++A  LLE +           +++ +YGV        ++    + LS+ 
Sbjct: 535 LIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVC-------KEGKVQEGLSMV 587

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFG 727
           + +  M      A Y  L + +   G
Sbjct: 588 ENMSKMGVKPTVATYTILIEEMLREG 613



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 3/200 (1%)

Query: 178 CFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISA 237
           C  F   +E+       + +A+I    + GK+D A ++ E   +E        +++LI  
Sbjct: 514 CDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYG 573

Query: 238 YGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP 297
             + G  QE +S+  +M +  +KP + TY  +I+   + G DF H   +F+ M+  G +P
Sbjct: 574 VCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREG-DFDHANRVFNQMVSFGHKP 632

Query: 298 DRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           D  T+ + +   C+ G + E A  +   M+  G+  D  TY  L+ A  +      AF +
Sbjct: 633 DVYTYTAFIHTYCTSGNVKE-AEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNV 691

Query: 357 MAEMPAKNISPNVVTYSTMI 376
           +  M      P+   ++ +I
Sbjct: 692 LKRMLDAGCDPSHPIWNNLI 711


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 236/487 (48%), Gaps = 45/487 (9%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           V  ++  F  A+  G    V  F+ +I  Y      ++A+   N M +YN  P+ VTYN 
Sbjct: 189 VSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNT 248

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           ++D  C KG +      ++  DM   G+ P+R T+N L+   C  G L EAA N+   M 
Sbjct: 249 ILDTLCKKGRLG--DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAA-NVIELMT 305

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
              +  D++TYN L++ +C   +++ AF++  EM    + P+VV+Y+T+I+G  +  ++ 
Sbjct: 306 QNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKIS 365

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A  +  EM   G+  + V++N ++  Y K G+ ++A     +ME SG   D VTYN L+
Sbjct: 366 EAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLI 425

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GY K G   E  R  ++M    +  + +T +T++    +    +EA ++    ++ G  
Sbjct: 426 NGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYF 485

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            D V Y  LI    K+G V+ A+ L DEM ++ I P+ VTYN II    +   TE  +  
Sbjct: 486 IDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISK 545

Query: 567 ----VERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
               +E  L   + + N  L   C +   DV++A +  N+++                EN
Sbjct: 546 LNELLESGLLPDETTYNTILHGYCREG--DVEKAFQFHNKMV----------------EN 587

Query: 621 RCRQEI---------LCILGVFQKMHKL------KIKP-NVVTFSAILNACSRCNSFEDA 664
             + ++         LC+ GV +K  KL      K K  + VT++ ++ +  +    +DA
Sbjct: 588 SFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDA 647

Query: 665 SMLLEEL 671
             LL E+
Sbjct: 648 FNLLSEM 654



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 199/424 (46%), Gaps = 46/424 (10%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++G +  A N+ E          V+ ++ LI+     G  +EA  + + M+   L P++V
Sbjct: 290 KMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVV 349

Query: 265 TYNAVIDACGKGGVDFKHVVEIF---DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +YN +I+ C    +++  + E F   ++M   GV+P+ +T N ++    + G  + A N 
Sbjct: 350 SYNTLINGC----LEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNT 405

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT---------- 371
             +M   G   D  TYNTL++  CK   M  AF  M EM  KN+  + VT          
Sbjct: 406 ITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465

Query: 372 -------------------------YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
                                    Y T+I GY K G +D AL ++ EMK   I    V+
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN ++    + G+ E+A+    E+  SG+  D  TYN +L GY ++G  ++  +   +M 
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            +   P++ T + L+      G+ ++A+++F  +   G   D V Y+ LI +LCK G ++
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLD 645

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A +LL EM ++ + P+  TYN+II A   S      + + E  + K  E  NL     Q
Sbjct: 646 DAFNLLSEMEEKELGPDHYTYNAIITALTDSG----RIREAEEFMSKMLEKGNLPDQVLQ 701

Query: 587 DDKD 590
            DK+
Sbjct: 702 LDKN 705



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 214/459 (46%), Gaps = 42/459 (9%)

Query: 235 ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC----GKGGVDFKHVVEIFDDM 290
           I AY +SG    A  +F  MKR  L+PNL+T N ++++         V F    E F+D 
Sbjct: 142 IGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSR--EAFNDA 199

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           ++ G+ P+  TFN ++        ++ A    N M       D  TYNT+LD +CK  ++
Sbjct: 200 IKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRL 259

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
             A +++ +M ++ + PN  TY+ ++ GY K G L +A N+   M    +  D  +YN +
Sbjct: 260 GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNML 319

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           ++     GR EEA  +  EME+  +  D V+YN L+ G  +  K  E  ++ E+M    V
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            PN +T++ ++  Y K G   +A     + +++G   D V Y+ LI+  CK G +  A  
Sbjct: 380 KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFR 439

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
            +DEM ++ ++ + VT N+I+    R                K +E+  L +   +    
Sbjct: 440 TMDEMGRKNMKMDSVTLNTILRTLCREK--------------KLEEAYKLLSSARKRGYF 485

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
           + E           +G L+    G  K  N  R      L ++ +M + +I P+ VT++ 
Sbjct: 486 IDEVS---------YGTLI---VGYFKDGNVDRA-----LKLWDEMKEKEIIPSTVTYNC 528

Query: 651 ILNACSRCNSFEDA----SMLLEELRLFDNQVYG-VAHG 684
           I+    +C   E A    + LLE   L D   Y  + HG
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHG 567



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 165/358 (46%), Gaps = 24/358 (6%)

Query: 167 GNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGN 226
           GN GE  + +      + R+  K D   L + ++  L R  K++ A  +  +A   GY  
Sbjct: 432 GNMGEAFRTMD----EMGRKNMKMDSVTL-NTILRTLCREKKLEEAYKLLSSARKRGYFI 486

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA---CGKGGVDFKHV 283
              ++  LI  Y + G    A+ +++ MK   + P+ VTYN +I     CGK     +  
Sbjct: 487 DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKT----EQA 542

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           +   +++L +G+ PD  T+N++L    R G  E A    N+MV      D+FT N LL  
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +C    ++ A ++     +K  + + VTY+T+I    K GRLDDA N+ SEM+   +G D
Sbjct: 603 LCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPD 662

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +YN +++     GR  EA     +M   G   D V             + D+   +  
Sbjct: 663 HYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVL------------QLDKNETVVT 710

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
              ++    + + YS  I      G YK+AM+IF E KQ G+  D   Y  L+D L K
Sbjct: 711 SETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 179/393 (45%), Gaps = 15/393 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS----ILGRL--GKVDLA 212
           Y  L+  L N G   +A +       R+E +N   KL   ++S    I G L   K+  A
Sbjct: 316 YNMLINGLCNEGRIEEAFKL------RDEMEN--LKLLPDVVSYNTLINGCLEWSKISEA 367

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
             + E    +G        + ++  Y + G   +A +    M+     P+ VTYN +I+ 
Sbjct: 368 FKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLING 427

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
             K G +        D+M R  ++ D +T N++L    R    E A  L +    RG   
Sbjct: 428 YCKAG-NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFI 486

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D  +Y TL+    K   +D A ++  EM  K I P+ VTY+ +I G  + G+ + A++  
Sbjct: 487 DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKL 546

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           +E+   G+  D  +YNT+L  Y + G  E+A     +M  +  + D  T N LL G   +
Sbjct: 547 NELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCME 606

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G  ++  ++F    +   + + +TY+TLI    K G   +A  +  E ++  L  D   Y
Sbjct: 607 GVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTY 666

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           +A+I AL  +G +  A   + +M ++G  P+ V
Sbjct: 667 NAIITALTDSGRIREAEEFMSKMLEKGNLPDQV 699



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/408 (22%), Positives = 174/408 (42%), Gaps = 25/408 (6%)

Query: 171 EWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
           EWSK  + F    +  E+      +  + M+    + GK+D A N        G+     
Sbjct: 360 EWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV 419

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            ++ LI+ Y ++G   EA    + M R N+K + VT N ++    +     +   ++   
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK-KLEEAYKLLSS 478

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
             + G   D +++ +L+    + G  + A  L++EM  + I     TYN ++  +C+  +
Sbjct: 479 ARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGK 538

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            + A   + E+    + P+  TY+T++ GY + G ++ A    ++M       D  + N 
Sbjct: 539 TEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNI 598

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +L      G  E+AL +     S G   D VTYN L+    K+G+ D+   +  +M+   
Sbjct: 599 LLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE 658

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL------------------ 511
           + P+  TY+ +I   +  G  +EA +   +  + G   D VL                  
Sbjct: 659 LGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESD 718

Query: 512 -----YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
                YS  I  LC  G  + A+ +  E  ++GI  +  TY +++D  
Sbjct: 719 SSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGL 766



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 186/435 (42%), Gaps = 71/435 (16%)

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID-------------------- 377
           +T + A  +  Q   AF+I  +M    + PN++T +T+++                    
Sbjct: 139 DTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFND 198

Query: 378 ------------------GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
                             GY    +  DA+   + M       D V+YNT+L    K GR
Sbjct: 199 AIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGR 258

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
             +A  +  +M+S G+  +  TYN L+ GY K G   E   + E M  + + P++ TY+ 
Sbjct: 259 LGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNM 318

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LI+     G  +EA ++  E +   L  DVV Y+ LI+   +   +  A  LL+EM+++G
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           ++PN VT+N ++  + +    E  +DD    + K +ES      C            T N
Sbjct: 379 VKPNAVTHNIMVKWYCK----EGKMDDASNTITKMEESG-FSPDCV-----------TYN 422

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
            +I  +      KAG   +  R   E          M +  +K + VT + IL    R  
Sbjct: 423 TLINGYC-----KAGNMGEAFRTMDE----------MGRKNMKMDSVTLNTILRTLCREK 467

Query: 660 SFEDASMLLEELRLFDNQVYGVAHG-LLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYN 717
             E+A  LL   R     +  V++G L++GY +D    +AL L+DE+K  +   ++  YN
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527

Query: 718 ALTDMLWHFGQKRGA 732
            +   L   G+   A
Sbjct: 528 CIIGGLCQCGKTEQA 542



 Score = 46.2 bits (108), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 54/270 (20%), Positives = 105/270 (38%), Gaps = 58/270 (21%)

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL---------- 519
            SP+     T I  Y + G    A QIF++ K+  L+ +++  + L+++L          
Sbjct: 131 TSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVS 190

Query: 520 ----------------------------CKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
                                       C     + AV  L+ M K    P+ VTYN+I+
Sbjct: 191 FSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTIL 250

Query: 552 DAFGRSA----TTECTVDDVERDLGKQKESANL--DAMCS----QDDKDVQEAGRTDNQI 601
           D   +        +  +D   R L   + + N+     C     ++  +V E    +N +
Sbjct: 251 DTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310

Query: 602 IKV--FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
             V  +  L+     +G+ E   +        +  +M  LK+ P+VV+++ ++N C   +
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFK--------LRDEMENLKLLPDVVSYNTLINGCLEWS 362

Query: 660 SFEDASMLLEELRLFDNQVYGVAHGLLMGY 689
              +A  LLEE+     +   V H +++ +
Sbjct: 363 KISEAFKLLEEMSEKGVKPNAVTHNIMVKW 392


>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 209/406 (51%), Gaps = 18/406 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+   G  G    AI  F     +E   +   K+ + ++ I  +LG+V+ A  + + 
Sbjct: 233 YSALIAAFGKLGRDDSAISLFDEM--KENGLHPTAKIYTTILGIYFKLGRVEKALGLVQE 290

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G   TVY ++ LI   G++G  +EA S+F +M +   KP++V  N +I+  GK G 
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAG- 349

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-------AVCSRGGLWEAARNLFNEMVHRGID 331
                +++F++M      P+ +T+N+++       A  S   LW      + +M   G+ 
Sbjct: 350 RLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLW------YEKMKENGVV 403

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
              FTY+ L+D  CK  +++ A  ++ EM  K  +P    Y ++I+   KA R + A  +
Sbjct: 404 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANEL 463

Query: 392 FSEMKF-LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           F E++   G    RV Y  ++    K GR  EA+ +  EM+  G   D   YNAL+ G  
Sbjct: 464 FQELRENCGYSSARV-YAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMV 522

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           + G  DE   +   M+ +  +P+L +++ +++ +++ G  K A+++F   K + +K DVV
Sbjct: 523 RVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVV 582

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            Y+ ++  L + G+ E A  L+ EM  +G   +++TY+SI++A G+
Sbjct: 583 SYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGK 628



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 195/410 (47%), Gaps = 38/410 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-K 255
           S ++ +LG+   V+ A +IF          T   ++++I    + G+ ++   ++N M  
Sbjct: 163 SEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCN 222

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             +  P+ VTY+A+I A GK G D    + +FD+M  NG+ P    + ++L +  + G  
Sbjct: 223 EGDCLPDTVTYSALIAAFGKLGRD-DSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRV 281

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  L  EM  +G    ++TY  L+  + K  +++ A+ I   M  +   P+VV  + +
Sbjct: 282 EKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNL 341

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI---------------------- 413
           I+   KAGRL DA+ +F EM+ L    + V+YNTV+                        
Sbjct: 342 INLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENG 401

Query: 414 --------------YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
                         + K  R E+ALL+ +EM+  G       Y +L+   GK  +Y+   
Sbjct: 402 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAAN 461

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +F++++ +C   +   Y+ +I    K G   EA+ +F E K+ G   DV  Y+AL+  +
Sbjct: 462 ELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGM 521

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
            + G+ + A SLL  M + G  P++ ++N I++ F R+   +  ++   R
Sbjct: 522 VRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTR 571



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 220/478 (46%), Gaps = 69/478 (14%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
            S ++   G++    +A+S+F  +K    KP   TYN++I    + G   + V E++++M
Sbjct: 162 LSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEG-HHEKVHELYNEM 220

Query: 291 LRNG-VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
              G   PD +T+++L+A   + G  ++A +LF+EM   G+      Y T+L    K  +
Sbjct: 221 CNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGR 280

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++ A  ++ EM  K  +  V TY+ +I G  KAG++++A ++F  M   G   D V  N 
Sbjct: 281 VEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINN 340

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG-YGKQGKYDEVRRMFEQMKAD 468
           ++++  K GR  +A+ + +EMES     + VTYN ++   +  + +  E    +E+MK +
Sbjct: 341 LINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKEN 400

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL--------- 519
            V P+  TYS LID + K    ++A+ +  E  + G       Y +LI+AL         
Sbjct: 401 GVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAA 460

Query: 520 ----------C----------------KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
                     C                K G +  AV L +EM K G  P+V  YN+++  
Sbjct: 461 NELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSG 520

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
             R   T    D+    L   +E+      C+ D         + N I+  F +    K 
Sbjct: 521 MVRVGMT----DEAHSLLRTMEENG-----CTPDL-------NSHNIILNGFARTGGPKG 564

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                           + +F +M   KIKP+VV+++ +L   SR   FE+A+ L++E+
Sbjct: 565 A---------------IEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEM 607



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 198/454 (43%), Gaps = 69/454 (15%)

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           KR N + +  TY A+I    + G+    + +   +M+R+         + ++ V  +  +
Sbjct: 116 KRRNFEHDSTTYMALIHCLDEAGM-LGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKM 174

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYS 373
              A ++F ++  R       TYN+++  + +    +   E+  EM  + +  P+ VTYS
Sbjct: 175 VNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYS 234

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I  + K GR D A+++F EMK  G+      Y T+L IY KLGR E+AL + +EM+  
Sbjct: 235 ALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEK 294

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G      TY  L+ G GK GK +E   +F  M  +   P+++  + LI++  K G   +A
Sbjct: 295 GCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADA 354

Query: 494 MQIFRE------------------------------------FKQAGLKADVVLYSALID 517
           +++F E                                     K+ G+      YS LID
Sbjct: 355 IKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILID 414

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
             CK   VE A+ LL+EM ++G  P    Y S+I+A G++               K+ E+
Sbjct: 415 GFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKA---------------KRYEA 459

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
           AN +      +     + R    +IK  G     K G+  +           + +F +M 
Sbjct: 460 AN-ELFQELRENCGYSSARVYAVMIKHLG-----KCGRLSEA----------VDLFNEMK 503

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           KL   P+V  ++A+++   R    ++A  LL  +
Sbjct: 504 KLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTM 537



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 107/221 (48%), Gaps = 1/221 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    +  +V+ A  + E    +G+     A+ +LI+A G++   + A  +F  ++ 
Sbjct: 410 SILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRE 469

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                +   Y  +I   GK G      V++F++M + G  PD   +N+L++   R G+ +
Sbjct: 470 NCGYSSARVYAVMIKHLGKCG-RLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTD 528

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +L   M   G   D+ ++N +L+   +      A E+   M    I P+VV+Y+T++
Sbjct: 529 EAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVL 588

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
              ++AG  ++A  +  EM   G   D ++Y+++L    K+
Sbjct: 589 GCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKI 629


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 155/584 (26%), Positives = 259/584 (44%), Gaps = 75/584 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++M+ +L +  ++D A  IFE           YA++ +I  YG +G   EA S+    + 
Sbjct: 170 TSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRA 229

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++V YN ++   GK G   K  + IF++M R+ + P+  T+N ++ +  + G  E
Sbjct: 230 KGCIPSVVAYNCILTCLGKKGKTDK-ALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVE 287

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AA  + + M   G+  ++ T N ++D +CK  ++D A  I   M  K  SP+  T+ ++I
Sbjct: 288 AAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLI 347

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  K GR+DDA  ++  M       + V Y +++  + K  R E+   + KEM  SG  
Sbjct: 348 DGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCS 407

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +  N  +    K G+ ++ R +FE++KA    P+  +YS LI    K G  +E  ++
Sbjct: 408 PDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYEL 467

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI------ 550
           +   K  G   D   Y+ +ID  CK+G V  A  LL+EM   G  P VVTY S+      
Sbjct: 468 YYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAK 527

Query: 551 -----------------------------IDAFGRSATTECTVDDVERDLGK-------- 573
                                        ID FG+    +     +E  + K        
Sbjct: 528 IDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYT 587

Query: 574 ---------QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                    + E  N   +C Q  KD++    T NQI      ++     + +K N+   
Sbjct: 588 WNCLLDGLVKAEEINEALVCFQSMKDLK---CTPNQITYC---ILINGLCKVRKFNKA-- 639

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVY- 679
                   +Q+M K  +KPN +T++A+++  ++  +   AS L E  R    + D+  Y 
Sbjct: 640 -----FVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYN 694

Query: 680 GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
            +  GL +  R    + A  LF+E +L   S  +    AL D L
Sbjct: 695 AMIEGLSIANR---ALDAYQLFEETRLKGCSIHTKTCVALLDAL 735



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 189/362 (52%), Gaps = 1/362 (0%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G    ++I  LG+ G+VD A  I+E  L+      V  +++LI  + +    ++   ++ 
Sbjct: 340 GATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYK 399

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            M R    P+L+  N  +D   K G   K    +F+++   G  PD  +++ L+    + 
Sbjct: 400 EMMRSGCSPDLMLLNTYMDCVFKAGETEKGRA-LFEEIKARGFLPDTRSYSILIHSLVKA 458

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G       L+  M  +G   D   YNT++D  CK  +++ A++++ EM      P VVTY
Sbjct: 459 GFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTY 518

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
            +++DG AK  RLD+A  +F E K  GI L++V Y++++  + K+GR +EA LV +EM  
Sbjct: 519 GSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQ 578

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G+  +  T+N LL G  K  + +E    F+ MK    +PN +TY  LI+   K   + +
Sbjct: 579 KGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNK 638

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A   ++E ++ GLK + + Y+A+I  L K+G V  A SL +     G  P+  +YN++I+
Sbjct: 639 AFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIE 698

Query: 553 AF 554
             
Sbjct: 699 GL 700



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 161/670 (24%), Positives = 271/670 (40%), Gaps = 105/670 (15%)

Query: 142 LGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           L  +++ F+F+      YT L+  L   GE  + +    F   +E        L + +I 
Sbjct: 48  LLQMMRHFKFRP-AFSAYTTLIGALSEVGESDRMLA--LFNQMQELGYEVNVHLLTTLIR 104

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
           +  R G+VD A ++ +   +  +   +  ++  I  +G+ G    A   F+ MK   L P
Sbjct: 105 VFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVP 164

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN---------------------------- 293
           + VTY +++    K        VEIF+ M +N                            
Sbjct: 165 DDVTYTSMMGVLCKAN-RLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSL 223

Query: 294 -------GVQPDRITFNSLLAVCSRGGLWEAARNLFNE---------------------- 324
                  G  P  + +N +L    + G  + A  +F E                      
Sbjct: 224 LERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKA 283

Query: 325 ------------MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
                       M   G+  ++ T N ++D +CK  ++D A  I   M  K  SP+  T+
Sbjct: 284 GNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATF 343

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
            ++IDG  K GR+DDA  ++  M       + V Y +++  + K  R E+   + KEM  
Sbjct: 344 CSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMR 403

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           SG   D +  N  +    K G+ ++ R +FE++KA    P+  +YS LI    K G  +E
Sbjct: 404 SGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARE 463

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
             +++   K  G   D   Y+ +ID  CK+G V  A  LL+EM   G  P VVTY S++D
Sbjct: 464 TYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVD 523

Query: 553 AFGRSATTECTVDDVERD--LGKQKESANLD---AMCSQDDKDVQEAGRTDNQIIKVFGQ 607
              +       +D ++    L ++ +S  ++    + S       + GR D   +     
Sbjct: 524 GLAK-------IDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYL----- 571

Query: 608 LVAEKAGQGKKEN----RC-------RQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
           ++ E   +G   N     C        +EI   L  FQ M  LK  PN +T+  ++N   
Sbjct: 572 VMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLC 631

Query: 657 RCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTAS 713
           +   F  A +  +E++   L  N +   A    +    N+  QA SLF+  +       S
Sbjct: 632 KVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNV-AQASSLFERFRASGGIPDS 690

Query: 714 AFYNALTDML 723
           A YNA+ + L
Sbjct: 691 ASYNAMIEGL 700



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 137/595 (23%), Positives = 256/595 (43%), Gaps = 105/595 (17%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L  +G+ D    +F      GY   V+  + LI  + R G    A+S+ + MK 
Sbjct: 65  TTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKS 124

Query: 257 YNLKPNLVTYNAVIDACGK-GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
                ++V YN  ID  GK G VD     + F +M  NG+ PD +T+ S++ V  +    
Sbjct: 125 NTFDADIVLYNVCIDCFGKVGKVDMAW--KFFHEMKANGLVPDDVTYTSMMGVLCKANRL 182

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  +F +M         + YNT++       + D A+ ++    AK   P+VV Y+ +
Sbjct: 183 DEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCI 242

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +    K G+ D AL +F EMK   +  +  +YN ++ +  K G  E A  V   M+ +G+
Sbjct: 243 LTCLGKKGKTDKALRIFEEMKRDAMP-NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGL 301

Query: 436 -----------------------------------RKDAVTYNALLGGYGKQGKYDEVRR 460
                                                D  T+ +L+ G GKQG+ D+  R
Sbjct: 302 FPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYR 361

Query: 461 MFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++E+M  AD + PN++ Y++LI  + K    ++  ++++E  ++G   D++L +  +D +
Sbjct: 362 IYERMLDADQI-PNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCV 420

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
            K G  E   +L +E+   G  P+  +Y+ +I +  ++              G  +E+  
Sbjct: 421 FKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKA--------------GFARETYE 466

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
           L    +  D+      R  N +I  F      K+G   K N+  Q       + ++M  +
Sbjct: 467 L--YYAMKDQGCVLDTRAYNTVIDGFC-----KSG---KVNKAYQ-------LLEEMKTM 509

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALS 699
              P VVT+ ++++  ++ +  ++A ML EE +         ++G+ +            
Sbjct: 510 GHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAK---------SNGIELN----------- 549

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
                           Y++L D     G+   A LV+ E  ++ +  NV++ +CL
Sbjct: 550 -------------QVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCL 591



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 197/420 (46%), Gaps = 38/420 (9%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREE--------------- 187
           I +  ++K+C  D  TF  L+  LG +G    A + +   +  ++               
Sbjct: 327 IFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFF 386

Query: 188 ---RKNDQGKLASAMI---------------SILGRLGKVDLAKNIFETALNEGYGNTVY 229
              RK D  K+   M+                 + + G+ +  + +FE     G+     
Sbjct: 387 KCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTR 446

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           ++S LI +  ++G+ +E   ++ +MK      +   YN VID  C  G V+     ++ +
Sbjct: 447 SYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVN--KAYQLLE 504

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +M   G  P  +T+ S++   ++    + A  LF E    GI+ +   Y++L+D   K  
Sbjct: 505 EMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVG 564

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++D A+ +M EM  K ++PNV T++ ++DG  KA  +++AL  F  MK L    ++++Y 
Sbjct: 565 RVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYC 624

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +++   K+ +F +A +  +EM+  G++ + +TY A++ G  K G   +   +FE+ +A 
Sbjct: 625 ILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRAS 684

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
              P+  +Y+ +I+  S      +A Q+F E +  G         AL+DAL K   +E A
Sbjct: 685 GGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 184/412 (44%), Gaps = 35/412 (8%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           +F ++ +I  +M   G  P   T   L+A C +      A +L   M H         Y 
Sbjct: 6   NFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYT 65

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+ A+ +  + D    +  +M       NV   +T+I  +++ GR+D AL++  EMK  
Sbjct: 66  TLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSN 125

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
               D V YN  +  + K+G+ + A     EM+++G+  D VTY +++G   K  + DE 
Sbjct: 126 TFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEA 185

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +FEQM+ +   P    Y+T+I  Y   G + EA  +    +  G    VV Y+ ++  
Sbjct: 186 VEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTC 245

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT--VDDVERDLG---- 572
           L K G  + A+ + +EM ++ + PN+ TYN II    ++   E    V D  ++ G    
Sbjct: 246 LGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPN 304

Query: 573 ---------KQKESANLDAMCS----QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
                    +  ++  LD  CS     D K     G T   +I   G+       QG+ +
Sbjct: 305 VRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGK-------QGRVD 357

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +  R        ++++M      PNVV +++++    +C+  ED   + +E+
Sbjct: 358 DAYR--------IYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEM 401


>gi|403366299|gb|EJY82949.1| hypothetical protein OXYTRI_19434 [Oxytricha trifallax]
          Length = 1420

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 228/459 (49%), Gaps = 47/459 (10%)

Query: 230  AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            +F+ +I    +    Q A  +FN MK   LKPN VTYN++IDAC +         ++  +
Sbjct: 586  SFNTIIKGCAQEKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCN-RLNSAWQLLSE 644

Query: 290  MLRNGVQPDRITFNSLLAVC-----SRGGL-----WEAARNLFNEMVHR--GIDQDIFTY 337
            M +N + PD  T+++L+        S+ G+      E A  L  +M     G+  D   Y
Sbjct: 645  MQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEILY 704

Query: 338  NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            N L+DA  +   ++ A  +  EM   NI P+ VTY  +I  Y  A +LD+A  +F +MK 
Sbjct: 705  NCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKD 764

Query: 398  LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
              +  + V+Y  ++    K  + E A+ V + M+  G++ + + +  L+ G+ K  K D+
Sbjct: 765  NCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAKSFKLDQ 824

Query: 458  VRRMFEQMKAD-CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ--AGLKADVVLYSA 514
               +++ MK D  + PN +T+++LID   +    K+AM+IF E KQ  +  K D++ YS 
Sbjct: 825  ALEVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEEMKQPISHTKPDLITYST 884

Query: 515  LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
            +I   C+   ++ A+ +L++M K  I  + V YNS++D         C  +++E  L   
Sbjct: 885  MIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGC-------CKANEIEMAL--- 934

Query: 575  KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
            K   N++ +       ++ +  T + +IK++G+               ++ +   LGV +
Sbjct: 935  KVYKNMEIL------KIKPSNVTYSILIKIYGK---------------QRNLPKALGVLE 973

Query: 635  KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
            +M K  I+P ++ ++ +L  C +    + A  L  ++R+
Sbjct: 974  EMKKDGIRPGLIVYTCLLQTCIKSRQLKTAEQLFHDMRI 1012



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 143/580 (24%), Positives = 257/580 (44%), Gaps = 113/580 (19%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            FS +I  Y R+    +A++V + MK   +KP+ V YN++ID C K     K  + ++D+
Sbjct: 368 TFSCMIKGYCRAQRLPQALNVLSIMKERGIKPDEVLYNSIIDGCSKNNQIAKAFL-LYDE 426

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           ML  GV P  ITFNSL+  C R G  + A  +  +M  + +  D +TY+TL   I    Q
Sbjct: 427 MLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLEQMKEKQVKPDNYTYSTLFKGIKSENQ 486

Query: 350 ---MDLAFEIMAEMPAKN-ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG------ 399
              ++ AF +  ++   N  +P+ + ++ ++D      +LD A+ +F ++K         
Sbjct: 487 RQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINCKQLDRAVELFKQLKPQSQPQIQV 546

Query: 400 ---------------------------------IGLDRVSYNTVLSIYAKLGRFEEALLV 426
                                            +  D +S+NT++   A+  + + A  +
Sbjct: 547 SNTDDADNSLSLEDSPDSAKNAPAVVNSSNHHFMRPDEISFNTIIKGCAQEKKLQLAFEM 606

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI----- 481
              M+   ++ + VTYN+L+    +  + +   ++  +M+ + + P+  TYSTLI     
Sbjct: 607 FNLMKMQCLKPNDVTYNSLIDACVRCNRLNSAWQLLSEMQQNNIVPDNFTYSTLIKGIRA 666

Query: 482 DVYSKGGL-----YKEAMQIFREFKQA--GLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           +  S+ G+      ++A  +  + KQ+  G+K D +LY+ LIDA  +   V  AV++  E
Sbjct: 667 ENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEILYNCLIDACVRFHDVNRAVAVFQE 726

Query: 535 MTKEGIRPNVVTYNSIIDAFG----------------------RSATTECTVDDVERDLG 572
           M    I+P+ VTY  +I A+G                       S T  C +D   ++  
Sbjct: 727 MQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKDNCLIPNSVTYGCLIDACVKNNQ 786

Query: 573 KQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
            ++     + M        +  G   N II  F  L+   A   K +          L V
Sbjct: 787 IERAMEVFETM--------KRDGVQLNTII--FTTLIKGFAKSFKLDQ--------ALEV 828

Query: 633 FQKMH-KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH-------- 683
           +Q M    KIKPN VTF+++++ C RCNS + A  + EE++        ++H        
Sbjct: 829 YQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEEMK------QPISHTKPDLITY 882

Query: 684 -GLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
             ++ G+ R+    QAL + ++++  +       YN+L D
Sbjct: 883 STMIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLD 922



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 181/370 (48%), Gaps = 9/370 (2%)

Query: 180  AFAVKREERKNDQGK-----LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSAL 234
            AFA+  + ++++ G      L + +I    R   V+ A  +F+         +   +  L
Sbjct: 683  AFALLEQMKQSNGGVKPDEILYNCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGIL 742

Query: 235  ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG 294
            I AYG +     A  VF  MK   L PN VTY  +IDAC K     +  +E+F+ M R+G
Sbjct: 743  IKAYGSANQLDNAFFVFKKMKDNCLIPNSVTYGCLIDACVKNN-QIERAMEVFETMKRDG 801

Query: 295  VQPDRITFNSLLAVCSRGGLWEAARNLFNEM-VHRGIDQDIFTYNTLLDAICKGAQMDLA 353
            VQ + I F +L+   ++    + A  ++  M +   I  +  T+N+L+D   +   +  A
Sbjct: 802  VQLNTIIFTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKA 861

Query: 354  FEIMAEM--PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
             EI  EM  P  +  P+++TYSTMI G+ +   +  AL M ++M+   I  D V YN++L
Sbjct: 862  MEIFEEMKQPISHTKPDLITYSTMIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLL 921

Query: 412  SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
                K    E AL V K ME   I+   VTY+ L+  YGKQ    +   + E+MK D + 
Sbjct: 922  DGCCKANEIEMALKVYKNMEILKIKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIR 981

Query: 472  PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
            P L+ Y+ L+    K    K A Q+F + +  G++ D + Y  +I+    +   +S + L
Sbjct: 982  PGLIVYTCLLQTCIKSRQLKTAEQLFHDMRIQGIRGDQLTYQTMINGCLYSQKFDSILIL 1041

Query: 532  LDEMTKEGIR 541
            L + +   ++
Sbjct: 1042 LKDASDSKVQ 1051



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 181/417 (43%), Gaps = 54/417 (12%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L +++I    +  ++  A  +++  L EG   T   F++LI    RSG   +A  V   M
Sbjct: 403 LYNSIIDGCSKNNQIAKAFLLYDEMLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLEQM 462

Query: 255 KRYNLKPNLVTYNAVIDACGKGGV--DFKHVVEIFDDMLR-NGVQPDRITFNSLLAVCSR 311
           K   +KP+  TY+ +           D +    +++ +   N   PD I FN LL  C  
Sbjct: 463 KEKQVKPDNYTYSTLFKGIKSENQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACIN 522

Query: 312 GGLWEAARNLFNEMV---------------------------------------HRGIDQ 332
               + A  LF ++                                        H  +  
Sbjct: 523 CKQLDRAVELFKQLKPQSQPQIQVSNTDDADNSLSLEDSPDSAKNAPAVVNSSNHHFMRP 582

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D  ++NT++    +  ++ LAFE+   M  + + PN VTY+++ID   +  RL+ A  + 
Sbjct: 583 DEISFNTIIKGCAQEKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNSAWQLL 642

Query: 393 SEMKFLGIGLDRVSYNTVLS-IYAKLGR---------FEEALLVCKEMESS--GIRKDAV 440
           SEM+   I  D  +Y+T++  I A+             E+A  + ++M+ S  G++ D +
Sbjct: 643 SEMQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEI 702

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
            YN L+    +    +    +F++M+   + P+ +TY  LI  Y        A  +F++ 
Sbjct: 703 LYNCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKKM 762

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           K   L  + V Y  LIDA  KN  +E A+ + + M ++G++ N + + ++I  F +S
Sbjct: 763 KDNCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAKS 819



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 220/503 (43%), Gaps = 63/503 (12%)

Query: 188 RKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEA 247
           RKN  G+       ++ RL + D   N  +  L+  +G T  A     SA+       + 
Sbjct: 189 RKN--GQFYDTYQEVVTRLTRDDCINN--QKDLHNFFGVTAKAIMLTKSAH-------KG 237

Query: 248 ISVFNSMKRYNLKPNLVT--YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           + +   M   N+ P LV    N VI+ C + G        +  + + N  + D +  ++L
Sbjct: 238 VLMIKLMSELNI-PVLVESHLNPVIEGCFRNGKQ-----NLVQEAVHNAKRTDFLASSTL 291

Query: 306 ---LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY----NTLLDAICKGAQMDLAFEIMA 358
              +   SR    + A   F+++      Q+  TY    N +LD++ K    + A +I  
Sbjct: 292 KIFVKYYSRLNQTQTALQYFHQLQQTSQAQNDPTYYQTVNQMLDSLLKAELFEEAEQIYN 351

Query: 359 EM-PAKNISPN---VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY 414
           ++       PN   ++T+S MI GY +A RL  ALN+ S MK  GI  D V YN+++   
Sbjct: 352 KVFTLSKDQPNCMDMMTFSCMIKGYCRAQRLPQALNVLSIMKERGIKPDEVLYNSIIDGC 411

Query: 415 AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
           +K  +  +A L+  EM   G+    +T+N+L+    + G  D+  R+ EQMK   V P+ 
Sbjct: 412 SKNNQIAKAFLLYDEMLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLEQMKEKQVKPDN 471

Query: 475 LTYSTL---IDVYSKGGLYKEAMQIFREFKQAG-LKADVVLYSALIDALCKNGLVESAVS 530
            TYSTL   I   ++    ++A  ++ + + +     D +L++ L+DA      ++ AV 
Sbjct: 472 YTYSTLFKGIKSENQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINCKQLDRAVE 531

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
           L  ++  +  +P +   N+  D    S + E + D  +          N  A+ +  +  
Sbjct: 532 LFKQLKPQS-QPQIQVSNT--DDADNSLSLEDSPDSAK----------NAPAVVNSSNHH 578

Query: 591 VQEAGRTD-NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
                    N IIK   Q                +++     +F  M    +KPN VT++
Sbjct: 579 FMRPDEISFNTIIKGCAQ---------------EKKLQLAFEMFNLMKMQCLKPNDVTYN 623

Query: 650 AILNACSRCNSFEDASMLLEELR 672
           ++++AC RCN    A  LL E++
Sbjct: 624 SLIDACVRCNRLNSAWQLLSEMQ 646


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 194/404 (48%), Gaps = 5/404 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   G++ +A   F    ++    ND     S +I    R GK+D A +    
Sbjct: 369 YNALINSLCKDGKFDEAELLFKEMGEKGLCANDVT--YSILIDSFCRRGKLDTAIHFLGK 426

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +  G   TVY +++LI+ + + G    A+S F+ M    LKP +V+Y ++I   C KG 
Sbjct: 427 MIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKG- 485

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
                   ++ +M   G+ P+  TF +L++   R      A  LF+EM+ + +  +  TY
Sbjct: 486 -KLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTY 544

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N +++  CK      AFE++ +M  K + P+  TY  +I      GR+ +A     ++  
Sbjct: 545 NVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHR 604

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
               L+ + Y+ +L  Y K GR  +AL VC+EM   G+  D V Y  L+ G  K+     
Sbjct: 605 EHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSA 664

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
           V  + + M    + P+ + Y+++ID YSK G  K+A  I+      G   ++V Y+ LI+
Sbjct: 665 VFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLIN 724

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            LCK GL++ A  L  EM      PN VTY   +D   R  + E
Sbjct: 725 ELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSME 768



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 220/448 (49%), Gaps = 19/448 (4%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  ++ LI    ++    EA+ + N + +  L  + VTY  ++    K   +F+    + 
Sbjct: 261 VVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQ-EFEVGAGVM 319

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           D+M+  G  P     +SL+    R G    A +L N +   G    +F YN L++++CK 
Sbjct: 320 DEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKD 379

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            + D A  +  EM  K +  N VTYS +ID + + G+LD A++   +M   GI +    Y
Sbjct: 380 GKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPY 439

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N++++ + KLG    A+    EM   G++   V+Y +L+ GY  +GK  E  R++ +M  
Sbjct: 440 NSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG 499

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             ++PN  T++TLI    +     +A ++F E  +  +  + V Y+ +I+  CK G    
Sbjct: 500 KGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVK 559

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVERDLGKQKE---SANLD 581
           A  LL++M ++G+ P+  TY  +I +    GR    +  +DD+ R+  K  E   SA L 
Sbjct: 560 AFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLH 619

Query: 582 AMCSQDDKDVQEAGRTDNQIIK--VFGQLVAEKA---GQGKKENRCRQEILCILGVFQKM 636
             C +    +++A     +++K  V   LV       G  K+     Q+   + G+ + M
Sbjct: 620 GYCKEG--RLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKE-----QDTSAVFGLLKNM 672

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDA 664
           H  +++P+ V ++++++  S+  S + A
Sbjct: 673 HDQRLRPDKVIYTSMIDGYSKAGSVKKA 700



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 133/573 (23%), Positives = 254/573 (44%), Gaps = 39/573 (6%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L ++ + ++   + +  +  G+  T  A S+L+    R G   +A  + N +K+    P+
Sbjct: 306 LCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPS 365

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
           L  YNA+I++  K G  F     +F +M   G+  + +T++ L+ + C RG L + A + 
Sbjct: 366 LFVYNALINSLCKDG-KFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKL-DTAIHF 423

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             +M+  GI   ++ YN+L++  CK   +  A     EM  K + P VV+Y+++I GY  
Sbjct: 424 LGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCN 483

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G+L +A  ++ EM   GI  +  ++ T++S   +  R  +A  +  EM    +  + VT
Sbjct: 484 KGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVT 543

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN ++ G+ K+G   +   +  QM    + P+  TY  LI      G   EA +   +  
Sbjct: 544 YNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLH 603

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +   K + + YSAL+   CK G +  A+ +  EM K G+  ++V Y  +ID         
Sbjct: 604 REHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDG-------- 655

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
                    + +Q  SA    + +  D+ ++        +I  +      KAG  KK   
Sbjct: 656 --------TIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYS-----KAGSVKKA-- 700

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV 681
                    G++  M      PN+VT++ ++N   +    + A +L +E+ + ++    V
Sbjct: 701 --------FGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHV 752

Query: 682 AHGLLMGY--RDNIWVQALSLF-DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
            +   + +  R+    +A+ L  D +K + ++T S  YN L       G+   A  ++ E
Sbjct: 753 TYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVS--YNILVRGFCKLGRVEEATKLLDE 810

Query: 739 GKRRQVWENVWSESCLDLHLMSSGAARAMVHAW 771
                ++ +  + S +       G     +  W
Sbjct: 811 MIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFW 843



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 191/423 (45%), Gaps = 70/423 (16%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++IS     GK+  A  ++     +G     Y F+ LISA  R+    +A  +F+ M  
Sbjct: 475 TSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLE 534

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLW 315
            N+ PN VTYN +I+   K G   K   E+ + M++ G+ PD  T+  L++ +CS G + 
Sbjct: 535 QNMMPNEVTYNVMIEGHCKEGNTVK-AFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVC 593

Query: 316 EA----------------------------------ARNLFNEMVHRGIDQDIFTYNTLL 341
           EA                                  A  +  EMV RG+D D+  Y  L+
Sbjct: 594 EAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLI 653

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           D   K       F ++  M  + + P+ V Y++MIDGY+KAG +  A  ++  M   G  
Sbjct: 654 DGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCT 713

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESS---------------------------- 433
            + V+Y T+++   K G  ++A L+ KEM  S                            
Sbjct: 714 PNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQL 773

Query: 434 ------GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
                 G+  + V+YN L+ G+ K G+ +E  ++ ++M  + + P+ +TYST+I    + 
Sbjct: 774 HNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRR 833

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G    A++ +      GLK D + Y+ LI   C  G +  A  L D+M + G++PN  T+
Sbjct: 834 GNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATH 893

Query: 548 NSI 550
            S+
Sbjct: 894 KSL 896



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 180/367 (49%), Gaps = 17/367 (4%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVY----AFSALISAYGRSGYCQEAISVF 251
           AS+++  L   G +D  + +FE AL + +    +     F  LI +Y +     +++ +F
Sbjct: 124 ASSLLQTLLLRGGLD-PREVFE-ALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIF 181

Query: 252 NSMKRYNLKPNLVTYNAVIDACGK-GGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVC 309
             M++  L P + T   V++   K   VD   V+ +F ++L  G++PD   + +++ + C
Sbjct: 182 RLMRQCELMPQVRTLGEVLNGLAKIRRVDM--VLVLFGEILSMGIRPDIYIYVAVIRSFC 239

Query: 310 SRGGLWEAARNLFNEMVHR--GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
                 +A      EM+ R    D ++  YN L+  +CK  ++  A EI   +  K ++ 
Sbjct: 240 ELKNFAKA-----KEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTA 294

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           + VTY T++ G  K    +    +  EM  LG      + ++++    + G+  +A  + 
Sbjct: 295 SEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLV 354

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
             ++  G       YNAL+    K GK+DE   +F++M    +  N +TYS LID + + 
Sbjct: 355 NRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRR 414

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G    A+    +   AG+K  V  Y++LI+  CK G + +AVS  DEM  +G++P VV+Y
Sbjct: 415 GKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSY 474

Query: 548 NSIIDAF 554
            S+I  +
Sbjct: 475 TSLISGY 481



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 107/469 (22%), Positives = 201/469 (42%), Gaps = 48/469 (10%)

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK-RYNLKPNLVTYNAVIDACGKGG 277
            L++ + ++  +F  LI A   +     A S+  ++  R  L P  V + A++D   K  
Sbjct: 96  GLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREV-FEALLDCFEK-- 152

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            DF   +  FD ++++ VQ  R+ F+S+L              +F  M    +   + T 
Sbjct: 153 CDFISSLG-FDLLIQSYVQEKRM-FDSVL--------------IFRLMRQCELMPQVRTL 196

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             +L+ + K  ++D+   +  E+ +  I P++  Y  +I  + +      A  M   M+ 
Sbjct: 197 GEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRME- 255

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
               L+ V YN ++    K  R  EA+ +   +   G+    VTY  L+ G  K  +++ 
Sbjct: 256 -SSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEV 314

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              + ++M      P     S+L++   + G   +A  +    K+ G    + +Y+ALI+
Sbjct: 315 GAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALIN 374

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS---------------ATTEC 562
           +LCK+G  + A  L  EM ++G+  N VTY+ +ID+F R                A  + 
Sbjct: 375 SLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKI 434

Query: 563 TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
           TV      +    +  NL A  S  D+ + +  +     +  +  L++    +GK     
Sbjct: 435 TVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPT---VVSYTSLISGYCNKGKLHEAF 491

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           R        ++ +M    I PN  TF+ +++A  R N   DA  L +E+
Sbjct: 492 R--------LYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEM 532



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 116/222 (52%), Gaps = 2/222 (0%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           ++++I  Y ++G  ++A  +++ M      PN+VTY  +I+   K G+  K  + ++ +M
Sbjct: 684 YTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAEL-LWKEM 742

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           L +   P+ +T+   L   +R G  E A  L N+M+ +G+  +  +YN L+   CK  ++
Sbjct: 743 LVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRV 801

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           + A +++ EM    I P+ +TYST+I    + G LD A+  +  M   G+  D ++YN +
Sbjct: 802 EEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFL 861

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           +      G   +A  +  +M   G++ +  T+ +L  G  ++
Sbjct: 862 IYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRK 903



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 94/186 (50%), Gaps = 4/186 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L + G +D A+ +++  L          +   +    R G  ++A+ + N M +
Sbjct: 720 TTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK 779

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             L  N V+YN ++   C  G V+     ++ D+M+ N + PD IT+++++  C R G  
Sbjct: 780 -GLLANTVSYNILVRGFCKLGRVE--EATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNL 836

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A   ++ M+++G+  D   YN L+   C   ++  AFE+  +M  + + PN  T+ ++
Sbjct: 837 DGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSL 896

Query: 376 IDGYAK 381
             G ++
Sbjct: 897 SHGASR 902


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 206/420 (49%), Gaps = 7/420 (1%)

Query: 145 ILKK-FEFKLCGADDYTFLLRELGN--RGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           I+KK FE ++   D +T+    LG+  + +   A+Q F    K     N      S +I+
Sbjct: 237 IMKKVFESEM-SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY--STLIN 293

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            L   G+V+ A ++    +  G   T +  +  I A    G  ++A  +F  MK    +P
Sbjct: 294 GLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEP 353

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           N+ TY A+I      G+  K  + +F  M R+GV P+ +T+N+L+ +       + A  +
Sbjct: 354 NVYTYTALISGLCVSGI-LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            N M   G   +I TYN ++   C       A  +M  M  +  S N+VTY+T+I GY  
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           +G    AL +   M+  G   D  SY  ++  + K+ + E A  +  EM   G+  + VT
Sbjct: 473 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y AL+ GY K  K D    + E MK     PN+ TY+ LI   +K   +  A ++ +   
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + G+  +VV Y+A+ID LCKNG    A+ + ++M ++G  PN++TY+S+I A G+    E
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 187/362 (51%), Gaps = 1/362 (0%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I  L  +G  + A  +F    N+G    VY ++ALIS    SG  + AI +F+ M R  +
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGV 386

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            PN VTYNA+I+   +     K+   + + M RNG  P+ +T+N ++      G  + A 
Sbjct: 387 FPNTVTYNALINILVENR-RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            + N M+ RG   ++ TYNT++   C       A  I+  M      P+  +Y+ +I G+
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K  +++ A  +F+EM   G+  + V+Y  ++  Y K  + + A  + + M+ SG R + 
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 565

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
            TYN L+ G  KQ  +     + + M  + + PN++TY+ +ID   K G    A+++F +
Sbjct: 566 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             + G   +++ YS+LI AL + G VE A +L  E+ + G+ P+ +TY  +I+A+  S  
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 685

Query: 560 TE 561
            E
Sbjct: 686 VE 687



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 253/550 (46%), Gaps = 46/550 (8%)

Query: 127 EALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKRE 186
           ++ H   A AR  +S  D+L +   ++ G   Y+ LL  L   G  +  +  +   +   
Sbjct: 153 KSCHSKEAMART-MSFLDMLSQSGLRM-GLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 187 ERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQE 246
            + N    + +A+I+ L + G V  A+ I +           + ++++I  + R      
Sbjct: 211 VQPNLL--IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDS 268

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD---DMLRNGVQPDRITFN 303
           A+ VFN M +   +PN VTY+ +I+    G  D   V E FD   +M+ +G+ P   T  
Sbjct: 269 ALQVFNQMAKEGCEPNTVTYSTLIN----GLCDSGRVNEAFDLIREMILHGILPTAHTCT 324

Query: 304 S-LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
             ++A+C   G +E A  LF +M ++G + +++TY  L+  +C    + +A  +   M  
Sbjct: 325 GPIIALCDM-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSR 383

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
             + PN VTY+ +I+   +  R+  A  + + M   G   + V+YN ++  Y  LG  ++
Sbjct: 384 DGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A+LV   M   G   + VTYN ++ GY   G      R+ + M+     P+  +Y+ LI 
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            + K    + A  +F E    GL  + V Y+ALID  CK+  +++A SLL+ M + G RP
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 563

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII 602
           NV TYN +I                   L KQ   +  + +C    K + E G       
Sbjct: 564 NVQTYNVLIHG-----------------LTKQNNFSGAEELC----KVMIEEG------- 595

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCI-LGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
            +F  +V   A     +  C+     + L +F KM +    PN++T+S+++ A  +    
Sbjct: 596 -IFPNVVTYTA---MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651

Query: 662 EDASMLLEEL 671
           E+A  L  EL
Sbjct: 652 EEAENLFAEL 661



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 201/403 (49%), Gaps = 29/403 (7%)

Query: 287 FDDML-RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           F DML ++G++     +++LL   SR G+  A  + ++ M+  G+  ++  YN +++A+C
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K   +  A  IM ++    +SP+  TY++MI G+ +   LD AL +F++M   G   + V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y+T+++     GR  EA  + +EM   GI   A T    +      G Y++  R+F  M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           K     PN+ TY+ LI      G+ K A+ +F    + G+  + V Y+ALI+ L +N  +
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD------VERDLGKQKESAN 579
           + A  +L+ M + G  PN+VTYN +I  +       C + D      V  ++ ++  SAN
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGY-------CILGDPKKAMLVMNNMLQRGHSAN 459

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC----------I 629
           L    +   K   ++G T +  +++   +   + G  K +     E++C           
Sbjct: 460 L-VTYNTIIKGYCDSGNTTSA-LRILDLM---RDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            G+F +M    + PN VT++A+++   +    + A+ LLE ++
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 213/440 (48%), Gaps = 12/440 (2%)

Query: 248 ISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL- 306
           +S  + + +  L+  L  Y+A++    + G+    V++ +  ML  GVQP+ + +N+++ 
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMT-AAVMDRYHRMLSEGVQPNLLIYNAVIN 223

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
           A+C  G + +A   +  ++    +  D FTY +++   C+   +D A ++  +M  +   
Sbjct: 224 ALCKDGNVADA-ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCE 282

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           PN VTYST+I+G   +GR+++A ++  EM   GI     +    +     +G +E+A  +
Sbjct: 283 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 342

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
             +M++ G   +  TY AL+ G    G       +F +M  D V PN +TY+ LI++  +
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVE 402

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
               K A  +     + G   ++V Y+ +I   C  G  + A+ +++ M + G   N+VT
Sbjct: 403 NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462

Query: 547 YNSIIDAFGRSA--TTECTVDDVERDLG-KQKESANLDAMCS-QDDKDVQEAGRTDNQII 602
           YN+II  +  S   T+   + D+ RD G K  E +  + +C       ++ A    N+++
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522

Query: 603 KVFGQLVAEKAGQGKKENRCRQEIL-CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
              G    E       +  C+ E L     + + M +   +PNV T++ +++  ++ N+F
Sbjct: 523 DD-GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 662 EDASMLLE---ELRLFDNQV 678
             A  L +   E  +F N V
Sbjct: 582 SGAEELCKVMIEEGIFPNVV 601



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 148/324 (45%), Gaps = 3/324 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+IL    ++  A  +       G    +  ++ +I  Y   G  ++A+ V N+M +
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
                NLVTYN +I   C  G       + I D M   G +PD  ++  L+    +    
Sbjct: 454 RGHSANLVTYNTIIKGYCDSGNT--TSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E+A  LFNEMV  G+  +  TY  L+D  CK  ++D A  ++  M      PNV TY+ +
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G  K      A  +   M   GI  + V+Y  ++    K G    AL +  +M   G 
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + +TY++L+   G++GK +E   +F +++   + P+ +TY  +I+ Y   G  + A  
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691

Query: 496 IFREFKQAGLKADVVLYSALIDAL 519
                 +AG +  +  Y  LI  L
Sbjct: 692 FLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 146/364 (40%), Gaps = 25/364 (6%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K+D A ++ E     G    V  ++ LI    +      A  +   M    + PN+VTY 
Sbjct: 545 KLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYT 604

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           A+ID   K G      +E+F+ M+  G  P+ +T++SL+    + G  E A NLF E+  
Sbjct: 605 AMIDGLCKNG-STSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 663

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL-- 385
            G+  D  TY  +++A     +++ AF  +  M      P + TY  +I G      L  
Sbjct: 664 HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723

Query: 386 ---------------------DDALNMFS-EMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
                                 DA+++ S ++  L  GL     N ++S  +  GR+ EA
Sbjct: 724 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 783

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
             +   M S G+  D   YN+LL    +    D    +F+ M       +L  Y  LI  
Sbjct: 784 NELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICA 843

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             +    KEA   F          D V+ + LID L ++G  +  +  L  M      P+
Sbjct: 844 LCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903

Query: 544 VVTY 547
              Y
Sbjct: 904 FHIY 907


>gi|356569143|ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/548 (24%), Positives = 255/548 (46%), Gaps = 53/548 (9%)

Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI------LGRLGKVDLAKN 214
           F++  L    +W +A+    +        ND+   + ++ +       + R  +  LA  
Sbjct: 104 FMVSLLSREPDWQRALALLDWI-------NDKALYSPSLFAYNVLLRNVLRAKQWHLAHG 156

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +F+    +G     Y +S LI+++G+ G    ++     M++ N+  +LV Y+ +ID   
Sbjct: 157 LFDEMRQKGLSPDRYTYSTLITSFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLAR 216

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K   D+   + IF  +  + + PD I +NS++ V  +  L+  AR L  EM    +  D 
Sbjct: 217 KLS-DYSKAISIFSRLKASTISPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDT 275

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            +Y+TLL       +   A  +  EM       ++ T + MID Y +     +A  +F  
Sbjct: 276 VSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWS 335

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M+ +GI  + VSYNT+L +Y +   F EA+ + + M+S  ++++ VTYN ++  YGK  +
Sbjct: 336 MRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLE 395

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
           +++   + ++MK   + PN +TYST+I ++ K G    A  +F++ + +G++ D VLY  
Sbjct: 396 HEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQT 455

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           +I A  + GLV  A  LL E+     RP+ +  ++ I    R+   E             
Sbjct: 456 MIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIGILARAGRIE------------- 498

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
              A      + D ++V++        I VFG ++   +   K  N        ++ VF+
Sbjct: 499 --EATWVFRQAFDAREVKD--------ISVFGCMINLFSKNKKYGN--------VVEVFE 540

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYR 690
           KM  +   P+    + +LNA  +   F+ A  L  ++     +F ++V+     L    +
Sbjct: 541 KMRVVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSLYGARK 600

Query: 691 DNIWVQAL 698
           D + V++L
Sbjct: 601 DFVMVESL 608



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 191/375 (50%), Gaps = 4/375 (1%)

Query: 184 KREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGY 243
           ++  R+      +  M  +L  +G+      ++  A+   Y     +   ++S   R   
Sbjct: 57  RQRSRRQQYWDRSVDMEELLAAIGQTQNEDELY--AVMSPYNGRQLSMRFMVSLLSREPD 114

Query: 244 CQEAISVFNSMKRYNL-KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
            Q A+++ + +    L  P+L  YN ++    +    +     +FD+M + G+ PDR T+
Sbjct: 115 WQRALALLDWINDKALYSPSLFAYNVLLRNVLRAK-QWHLAHGLFDEMRQKGLSPDRYTY 173

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           ++L+    + GL++++     +M    +  D+  Y+ L+D   K +    A  I + + A
Sbjct: 174 STLITSFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKA 233

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
             ISP+++ Y++MI+ + KA    +A  +  EM+   +  D VSY+T+L+IY    +F E
Sbjct: 234 STISPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVE 293

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           AL +  EM  +    D  T N ++  YG+     E  R+F  M+   + PN+++Y+TL+ 
Sbjct: 294 ALSLFFEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLR 353

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
           VY +  L+ EA+ +FR  +   ++ +VV Y+ +I+   K    E A +L+ EM K GI P
Sbjct: 354 VYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEP 413

Query: 543 NVVTYNSIIDAFGRS 557
           N +TY++II  + ++
Sbjct: 414 NAITYSTIISIWEKA 428



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/278 (20%), Positives = 133/278 (47%), Gaps = 13/278 (4%)

Query: 201 SILGRLGKVDL---AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++L   G+ DL   A ++F    ++     V  ++ +I+ YG++   ++A ++   MK+ 
Sbjct: 350 TLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKR 409

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            ++PN +TY+ +I    K G        +F  +  +GV+ D + + +++    R GL   
Sbjct: 410 GIEPNAITYSTIISIWEKAG-KLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAH 468

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A+ L +E+       D    +T +  + +  +++ A  +  +        ++  +  MI+
Sbjct: 469 AKRLLHELKR----PDNIPRDTAIGILARAGRIEEATWVFRQAFDAREVKDISVFGCMIN 524

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG-IR 436
            ++K  +  + + +F +M+ +G   D      VL+ + KL  F++A  + ++M   G + 
Sbjct: 525 LFSKNKKYGNVVEVFEKMRVVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVF 584

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
            D V +  +L  YG +  +  V  +FE++ ++   PN+
Sbjct: 585 PDEVHFQ-MLSLYGARKDFVMVESLFEKLDSN---PNI 618


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 194/375 (51%), Gaps = 9/375 (2%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + ++S L +  K+   + +++  +       +  F+  I+   R+G   +A      MK
Sbjct: 168 CNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMK 227

Query: 256 RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIF-DDMLRNGVQPDRITFNSLLAVCSRGG 313
            + + PN+VTYN ++D  C +G     +  E F  +ML N + P+ +TFN+L+    +  
Sbjct: 228 AWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDE 287

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
              AA+  F EM  +G+  +I TYN+L++ +C   +++ A ++  +M    + PN+VTY+
Sbjct: 288 NVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYN 347

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I+G+ K   + +A  +F ++    +  + +++NT++  Y K G  EE   +C  M   
Sbjct: 348 ALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDE 407

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI  +  TYN L+ G  ++      + +  +M+   +  +++TY+ LID   K    + A
Sbjct: 408 GILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNA 467

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            ++  E    GLK + V Y+ L+D  C  G +++A+++   M KE  +PNVVTYN +I  
Sbjct: 468 EKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKG 527

Query: 554 FGRSATTECTVDDVE 568
           +       C ++ +E
Sbjct: 528 Y-------CKINKLE 535



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 227/466 (48%), Gaps = 45/466 (9%)

Query: 215 IFETALNEG--YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
           +F + L +G   G T      L+ AY ++     A   F   K Y  K +L + N ++ A
Sbjct: 115 VFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSA 174

Query: 273 CGK----GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
             K    G V++     ++ +M++  +  +  TFN  +    R G    A +   +M   
Sbjct: 175 LVKENKIGDVEY-----VYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAW 229

Query: 329 GIDQDIFTYNTLLDAICK---GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           GI  ++ TYNTL+D  CK     +M  A   M EM A  I PN VT++T+IDG+ K   +
Sbjct: 230 GISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENV 289

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             A   F EM+  G+  + V+YN++++     G+ EEA+ +  +M   G++ + VTYNAL
Sbjct: 290 AAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNAL 349

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G+ K+    E  ++F+ +    + PN++T++T+ID Y K G+ +E   +       G+
Sbjct: 350 INGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGI 409

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
             +V  Y+ LI  LC+   +++A  LL+EM  +G++ +VVTYN +ID             
Sbjct: 410 LPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDG------------ 457

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
                L K  +S N + + ++    +   G   N +   +  L+     +GK        
Sbjct: 458 -----LCKNDKSRNAEKLLNE----MFNLGLKPNHV--TYNTLMDGYCMEGK-------- 498

Query: 626 ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +   L V  +M K + +PNVVT++ ++    + N  E A+ LL E+
Sbjct: 499 LKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEM 544



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 193/355 (54%), Gaps = 6/355 (1%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY---GRSGYCQEAISVFNSMKR 256
           I+ L R GK++ A++  E     G    V  ++ L+  Y   G +G   +A +    M  
Sbjct: 207 INGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLA 266

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             + PN VT+N +ID   K   +     + F++M + G++P+ +T+NSL+  +C+ G L 
Sbjct: 267 NKICPNEVTFNTLIDGFCKDE-NVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLE 325

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA  +L+++MV  G+  +I TYN L++  CK   M  A ++  ++  + + PNV+T++TM
Sbjct: 326 EAI-DLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTM 384

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID Y K G +++  ++ S M   GI  +  +YN +++   +    + A  +  EME+ G+
Sbjct: 385 IDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGL 444

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D VTYN L+ G  K  K     ++  +M    + PN +TY+TL+D Y   G  K A+ 
Sbjct: 445 KGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALN 504

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           +    ++   + +VV Y+ LI   CK   +E+A  LL+EM ++G+ PN  TY+ +
Sbjct: 505 VRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 139/247 (56%), Gaps = 1/247 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I+ L   GK++ A ++++  +  G    +  ++ALI+ + +    +EA  VF+ + +
Sbjct: 312 NSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSK 371

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L PN++T+N +IDA  K G+  +    +   ML  G+ P+  T+N L+A   R    +
Sbjct: 372 QELVPNVITFNTMIDAYCKEGM-MEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQ 430

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AA+ L NEM ++G+  D+ TYN L+D +CK  +   A +++ EM    + PN VTY+T++
Sbjct: 431 AAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLM 490

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DGY   G+L  ALN+ + M+      + V+YN ++  Y K+ + E A  +  EM   G+ 
Sbjct: 491 DGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLN 550

Query: 437 KDAVTYN 443
            +  TY+
Sbjct: 551 PNRTTYD 557


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 189/365 (51%), Gaps = 1/365 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L +LG+   A N+F+    +     V+ ++ LI +        +A  + N M  
Sbjct: 313 TVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLE 372

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P++VTYNA+ID   K G+     +EI   M  N   P+  T+N L+    RG    
Sbjct: 373 KGLIPSVVTYNALIDGYCKKGLS-ASALEILSLMESNNCSPNARTYNELILGFCRGKNIH 431

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +L ++M+ R +  ++ TYN L+   CK   +  A+++++ M    + P+  TYS  I
Sbjct: 432 KAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFI 491

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D   K G +++A ++F  +K  GI  + V Y+T++  Y K+G+  +   +  +M S+G  
Sbjct: 492 DTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCV 551

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +++TYN+L+ GY K+  + E R + + M    + P   TY+ LID   K   + +A  +
Sbjct: 552 PNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDM 611

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F +    G   DV +Y+A I A C +G ++ A  L+ +M  +GI P+ + Y   IDA+GR
Sbjct: 612 FDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGR 671

Query: 557 SATTE 561
             + +
Sbjct: 672 FGSID 676



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 229/489 (46%), Gaps = 25/489 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + M++   +LG V  A+      +  G     + +++LI  Y R+     A ++F SM  
Sbjct: 208 NTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPN 267

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
                N V+Y  +I   C    VD    +++F  M  +   P   T+  ++ A+C  G  
Sbjct: 268 KGCLRNEVSYTNLIHGFCEARRVD--EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRK 325

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA  N+F EM  +    ++ TY  L+ ++C+ +  D A +I+  M  K + P+VVTY+ 
Sbjct: 326 TEAL-NMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNA 384

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDGY K G    AL + S M+      +  +YN ++  + +     +A+ +  +M    
Sbjct: 385 LIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERK 444

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++ + VTYN L+ G  K+G      ++   M    + P+  TYS  ID   K GL +EA 
Sbjct: 445 LQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEAR 504

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +F   K+ G+KA+ V+YS LID  CK G V     LLD+M   G  PN +TYNS+ID +
Sbjct: 505 SLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGY 564

Query: 555 GRSAT---TECTVDD-VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK------- 603
            +          VD  ++RD+    ++  +       D +  +A    +Q++        
Sbjct: 565 CKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDV 624

Query: 604 -VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
            ++   +      G+ ++   + ++C      KM+   I P+ + ++  ++A  R  S +
Sbjct: 625 FIYTAFIHAYCSHGRLKD--AEVLIC------KMNAKGIMPDTMLYTLFIDAYGRFGSID 676

Query: 663 DASMLLEEL 671
            A  +L+ +
Sbjct: 677 GAFGILKRM 685



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 135/561 (24%), Positives = 257/561 (45%), Gaps = 50/561 (8%)

Query: 198 AMISILGRLGKVDLAKN--IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           +M++IL   G + +A+N  I      +   N ++    L S   R     +A     +++
Sbjct: 115 SMLNILVPNGYLRIAENMRILMIKSTDSSENALFVLEMLRSMNRRV----DAFKFKLTLR 170

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHV-VEIFDDMLRNGVQPDRITFNSLL-AVCSRGG 313
            YN+   L++   +ID       + K V +E+ DDM    V P+  T N+++   C  G 
Sbjct: 171 CYNMLLMLLSRFLMID-------EMKSVYLEMLDDM----VTPNIFTLNTMVNGYCKLGN 219

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           + EA   + +++V  G+  D FTY +L+   C+   +D A  I   MP K    N V+Y+
Sbjct: 220 VVEAELYV-SKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYT 278

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I G+ +A R+D+AL +FS+M          +Y  ++    +LGR  EAL + KEM   
Sbjct: 279 NLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEK 338

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
             + +  TY  L+    +   +D+ +++   M    + P+++TY+ LID Y K GL   A
Sbjct: 339 HCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASA 398

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           ++I    +      +   Y+ LI   C+   +  A+SLL +M +  ++PNVVTYN +I  
Sbjct: 399 LEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHG 458

Query: 554 ------FGRSATTECTVDDVERDLGKQKESANLDAMCSQD--------DKDVQEAGRTDN 599
                  G +      +++      +   S  +D +C +          + ++E G   N
Sbjct: 459 QCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKAN 518

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF--QKMHKLKIKPNVVTFSAILNACSR 657
           ++I  +  L+      GK  +          G F   KM      PN +T++++++   +
Sbjct: 519 EVI--YSTLIDGYCKVGKVSD----------GRFLLDKMLSAGCVPNSITYNSLIDGYCK 566

Query: 658 CNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAF 715
             +F++A +L++ +   D +     + +L+    +D+ + QA  +FD++    S      
Sbjct: 567 EKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFI 626

Query: 716 YNALTDMLWHFGQKRGAQLVV 736
           Y A        G+ + A++++
Sbjct: 627 YTAFIHAYCSHGRLKDAEVLI 647



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 175/422 (41%), Gaps = 65/422 (15%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S  I  L + G V+ A+++FE+   +G       +S LI  Y + G   +   + + M  
Sbjct: 488 SVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLS 547

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               PN +TYN++ID   K   +FK    + D M++  ++P   T+  L+    +   ++
Sbjct: 548 AGCVPNSITYNSLIDGYCKEK-NFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFD 606

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A ++F++M+  G   D+F Y   + A C   ++  A  ++ +M AK I P+ + Y+  I
Sbjct: 607 QAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFI 666

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL------------------------- 411
           D Y + G +D A  +   M  +G      +Y+ ++                         
Sbjct: 667 DAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVA 726

Query: 412 -SIYAKLGR---FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
            + ++   R   +E  L +  +M   G   +A TY   + G  K G  +   R+F+ MK 
Sbjct: 727 SNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKE 786

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQ-------------------------------- 495
              SPN   Y++L+    + GLY EA++                                
Sbjct: 787 KGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEK 846

Query: 496 ---IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
              +F  F Q     D +++  LID L K GL +    L   M  +G + +  TY+ +I+
Sbjct: 847 AKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIE 906

Query: 553 AF 554
            F
Sbjct: 907 GF 908



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 51/258 (19%), Positives = 84/258 (32%), Gaps = 69/258 (26%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALI------------------- 235
           L +  I   GR G +D A  I +     G   + Y +S LI                   
Sbjct: 661 LYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSD 720

Query: 236 -----------SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHV 283
                      + + R  Y +  + +F  M  +   PN  TY   I   C  G ++  H 
Sbjct: 721 LSSGVASNDFSNCWRRVDY-EFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAH- 778

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW---------------------------- 315
             +FD M   G  P+   +NSLL    + GL+                            
Sbjct: 779 -RLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCG 837

Query: 316 -------EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
                  E A+ +F   +    + D   +  L+D + K    D   ++   M  +    +
Sbjct: 838 LYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIH 897

Query: 369 VVTYSTMIDGYAKAGRLD 386
             TYS +I+G+     +D
Sbjct: 898 PKTYSMLIEGFDGIQEID 915


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 234/524 (44%), Gaps = 73/524 (13%)

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR---YNLKPNLVTY 266
           D    +F      GY   V++++ALI         QEA+ +   M     YN  PN+V+Y
Sbjct: 147 DAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSY 206

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           + +ID   K G                  + D+  F                  LF+EM+
Sbjct: 207 STIIDGFFKEG------------------EVDKAYF------------------LFDEMI 230

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +G   D+ TY++L+D +CK   M+ A  I+  M  K + PN  TY+ MI GY   G+L+
Sbjct: 231 GQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLE 290

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A+ +  +M   G+  D V+Y  ++  Y K+GR  EA  V   M   G + ++  Y+ LL
Sbjct: 291 EAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILL 350

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GY  +G   +VR + + M  D +      ++ LI  Y+K G   +AM  F E +Q GL+
Sbjct: 351 HGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLR 410

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR----SATTEC 562
            DVV YS +I  LCK G VE AV   ++M  EG+ PN++++ S+I             E 
Sbjct: 411 PDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEEL 470

Query: 563 TVDDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIKV--------FGQLVAEK 612
             + + R +       N  +D +C +    V EA    + +I +        +  L+   
Sbjct: 471 AFEMINRGIHPDAIFMNTIMDNLCKEG--RVVEAQDFFDMVIHIGVKPNVVSYNTLIDGY 528

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              GK +   +Q        F +M  + ++P+  T++A+LN   +    EDA  L  E+ 
Sbjct: 529 CFVGKMDESIKQ--------FDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMF 580

Query: 673 LFDNQVYGVA-----HGLLMGYRDNIWVQALSLFDEVKLMDSST 711
             D +   +      HGL    R    V A  L+  +K++D  T
Sbjct: 581 RKDVKFCAITSNIILHGLFQAGR---IVAARELY--MKMVDRGT 619



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 208/396 (52%), Gaps = 5/396 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L++     G  ++A   F   V++ ++ N    +   ++      G +   +++ + 
Sbjct: 311 YILLIQYYCKIGRCAEARSVFDSMVRKGQKPN--STIYHILLHGYATKGALIDVRDLLDL 368

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            + +G      AF+ LI AY + G   +A++ F  M++  L+P++V+Y+ VI    K G 
Sbjct: 369 MIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIG- 427

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             +  V  F+ M+  G+ P+ I+F SL+  +CS G  W+    L  EM++RGI  D    
Sbjct: 428 RVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGE-WKKVEELAFEMINRGIHPDAIFM 486

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           NT++D +CK  ++  A +    +    + PNVV+Y+T+IDGY   G++D+++  F  M  
Sbjct: 487 NTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVS 546

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           +G+  D  +YN +L+ Y K GR E+AL + +EM    ++  A+T N +L G  + G+   
Sbjct: 547 IGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVA 606

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            R ++ +M        + TY+T++    +     EA+++F + +    + DV  ++ +I+
Sbjct: 607 ARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVIN 666

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           AL K G ++ A SL   M   G  P+V+TY+ +I +
Sbjct: 667 ALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKS 702



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 177/355 (49%), Gaps = 5/355 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I    + G VD A   F      G    V ++S +I    + G  ++A+  FN M    
Sbjct: 384 LICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEG 443

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
           L PN++++ ++I   C  G  ++K V E+  +M+  G+ PD I  N+++  +C  G + E
Sbjct: 444 LSPNIISFTSLIHGLCSIG--EWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVE 501

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           A ++ F+ ++H G+  ++ +YNTL+D  C   +MD + +    M +  + P+  TY+ ++
Sbjct: 502 A-QDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALL 560

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY K GR++DAL ++ EM    +    ++ N +L    + GR   A  +  +M   G +
Sbjct: 561 NGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQ 620

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
               TYN +LGG  +    DE  RMFE +++     ++ T++ +I+   K G   EA  +
Sbjct: 621 LRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSL 680

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           F      G    V+ YS +I +  + GL+E +  L   M K G   +    N II
Sbjct: 681 FSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVII 735



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I IL ++G+V+ A   F   ++EG    + +F++LI      G  ++   +   M  
Sbjct: 417 STVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMIN 476

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLL-AVCSRG 312
             + P+ +  N ++D   K G     VVE    FD ++  GV+P+ +++N+L+   C  G
Sbjct: 477 RGIHPDAIFMNTIMDNLCKEG----RVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVG 532

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            + E+ +  F+ MV  G+  D +TYN LL+   K  +++ A  +  EM  K++    +T 
Sbjct: 533 KMDESIKQ-FDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITS 591

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + ++ G  +AGR+  A  ++ +M   G  L   +YNTVL    +    +EAL + +++ S
Sbjct: 592 NIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS 651

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
                D  T+N ++    K G+ DE + +F  M      P+++TYS +I    + GL +E
Sbjct: 652 KEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEE 711

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           +  +F   ++ G  AD  + + +I  L + G V  A + L ++ ++
Sbjct: 712 SDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEK 757



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 148/341 (43%), Gaps = 38/341 (11%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +T L+  L + GEW K ++  AF +       D     + ++  L + G+V  A++ F+ 
Sbjct: 451 FTSLIHGLCSIGEWKK-VEELAFEMINRGIHPD-AIFMNTIMDNLCKEGRVVEAQDFFDM 508

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            ++ G    V +++ LI  Y   G   E+I  F+ M    L+P+  TYNA+++   K G 
Sbjct: 509 VIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNG- 567

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +  + ++ +M R  V+   IT N +L    + G   AAR L+ +MV RG    I TYN
Sbjct: 568 RVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYN 627

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNIS-------------------------------- 366
           T+L  +C+ + +D A  +  ++ +K                                   
Sbjct: 628 TVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLR 687

Query: 367 ---PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
              P+V+TYS MI    + G L+++ ++F  M+  G   D    N ++    + G    A
Sbjct: 688 GPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRA 747

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
                +++      +A T   L+    ++    EV+ + E+
Sbjct: 748 GTYLTKIDEKNFSVEASTAALLIPIVSEKKYQKEVKFLPEK 788


>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Glycine max]
          Length = 461

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 183/352 (51%), Gaps = 4/352 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI  L ++ +  +  ++      +G  N V  F  ++  Y R+    EA+  FN M +Y+
Sbjct: 84  MIESLAKIRQYQIVWDLVSAMRKKGMLN-VETFCIMMRKYARANKVDEAVYTFNVMDKYD 142

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           + PNL  +N ++ A  K   + +   EIFD M +    PD  +++ LL    +      A
Sbjct: 143 VVPNLAAFNGLLSALCKSN-NVRKAQEIFDAM-KGQFVPDEKSYSILLEGWGKAPNLPRA 200

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           R +F EMV  G D D+ TY  ++D +CK  ++D A E++ EM   N  P    YS ++  
Sbjct: 201 REVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHT 260

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y    R++DA++ F EM   GI  D V+YN ++  + K+ +F+    V KEMES+G+  +
Sbjct: 261 YGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPN 320

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           + T N ++     QG+ D   R+F +M   C  P+  TY+ +I ++ +    + A++I++
Sbjct: 321 SRTCNVIISSMIGQGQTDRAFRVFCRMIKLC-EPDADTYTMMIKMFCEKNELEMALKIWK 379

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             K       +  +SALI  LC+      A  +++EM ++GIRP+ +T+  +
Sbjct: 380 YMKSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRL 431



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 172/357 (48%), Gaps = 23/357 (6%)

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            RG    I  Y+ +++++ K  Q  + +++++ M  K +  NV T+  M+  YA+A ++D
Sbjct: 71  QRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKGML-NVETFCIMMRKYARANKVD 129

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A+  F+ M    +  +  ++N +LS   K     +A  +   M+   +  D  +Y+ LL
Sbjct: 130 EAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKGQFV-PDEKSYSILL 188

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G+GK       R +F +M      P+++TY  ++DV  K G   EA+++ +E      +
Sbjct: 189 EGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCR 248

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD- 565
               +YS L+        +E A+    EM K+GI+ +VV YN++I AF       C V+ 
Sbjct: 249 PTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAF-------CKVNK 301

Query: 566 --DVERDLGKQKESANL---DAMCSQDDKDVQEAGRTDNQIIKVFGQLV------AEKAG 614
             +V R L K+ ES  +      C+     +   G+TD +  +VF +++      A+   
Sbjct: 302 FKNVHRVL-KEMESNGVAPNSRTCNVIISSMIGQGQTD-RAFRVFCRMIKLCEPDADTYT 359

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              K    + E+   L +++ M   +  P++ TFSA++      ++   A +++EE+
Sbjct: 360 MMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEM 416



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 2/221 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           M+ +L + G+VD A  + +         T + +S L+  YG     ++AI  F  M +  
Sbjct: 222 MVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKKG 281

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           +K ++V YNA+I A  K    FK+V  +  +M  NGV P+  T N +++     G  + A
Sbjct: 282 IKADVVAYNALIGAFCKVN-KFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRA 340

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +F  M+ +  + D  TY  ++   C+  ++++A +I   M +K   P++ T+S +I G
Sbjct: 341 FRVFCRMI-KLCEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKG 399

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
             +      A  +  EM   GI   R+++  +  +  K GR
Sbjct: 400 LCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGR 440



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 131/322 (40%), Gaps = 47/322 (14%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++S L +   V  A+ IF+ A+   +     ++S L+  +G++     A  VF  M  
Sbjct: 151 NGLLSALCKSNNVRKAQEIFD-AMKGQFVPDEKSYSILLEGWGKAPNLPRAREVFREMVE 209

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               P++VTY  ++D  C  G VD    VE+  +M     +P    ++ L+         
Sbjct: 210 AGCDPDVVTYGIMVDVLCKAGRVD--EAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRI 267

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A + F EM  +GI  D+  YN L+ A CK  +      ++ EM +  ++PN  T + +
Sbjct: 268 EDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVI 327

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL----------- 424
           I      G+ D A  +F  M  L    D  +Y  ++ ++ +    E AL           
Sbjct: 328 ISSMIGQGQTDRAFRVFCRMIKL-CEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQF 386

Query: 425 ------------------------LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
                                   +V +EM   GIR   +T+  L     K+G+ D ++ 
Sbjct: 387 VPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDVLKF 446

Query: 461 MFEQMKADCVSPNLLTYSTLID 482
           + E+M       NLL    L D
Sbjct: 447 LHEKM-------NLLVKEPLYD 461


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 229/465 (49%), Gaps = 21/465 (4%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           +L  + +     ++    G    V+ ++ LI    R    ++A  +F+ M   NL  ++V
Sbjct: 188 KLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIV 247

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TYN +ID   K G +     ++ + M    V P+ ITFNSLL+   +    + AR+L  E
Sbjct: 248 TYNTLIDGYCKVG-ELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKE 306

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G   D +TY+ L D + +    + A E+  +   K I  N  T S +++G  K G+
Sbjct: 307 MEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGK 366

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           ++ A  +  +    G+  D V YNT ++ Y ++G   +A+L  + MES G+R +++T+N+
Sbjct: 367 VEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNS 426

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+  +    + D+     ++M    V+P++ TY+TLID Y K   +    QI  + ++ G
Sbjct: 427 LIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIG 486

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGRSATTE 561
           +K +VV Y +LI+ LCK+G +  A  +L +M   G+ PN   YN +ID     G+     
Sbjct: 487 VKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDAL 546

Query: 562 CTVDDVER-DLGKQKESAN--LDAMCSQ------DDKDVQEAGRTDNQIIKVFGQLVAEK 612
              D++ R ++     + N  +D +C +      +D   Q      +  +  +  L++  
Sbjct: 547 RFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGY 606

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
           A  G   ++C       LG+++ M  L IKP V T+  +++ CS+
Sbjct: 607 ANAGNV-SKC-------LGLYETMKNLGIKPTVRTYHPLISGCSK 643



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 246/506 (48%), Gaps = 42/506 (8%)

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN 293
           L+S   +S   +EA+ ++  M+R + K   +   +++ +C      F  VV++F ++  +
Sbjct: 112 LLSVCCKSKMLREAVELYEFMRR-DGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENS 170

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G + D   +   +    +    +      + M  RG+  ++F YN L+  +C+  ++  A
Sbjct: 171 GFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDA 230

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
            ++  EM   N+  ++VTY+T+IDGY K G LD A  M   MK   +  + +++N++LS 
Sbjct: 231 EKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSG 290

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
             K+ + +EA  + KEME +G   D  TY+ L  G  +    +    ++EQ     +  N
Sbjct: 291 LCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRIN 350

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
             T S L++   K G  ++A +I ++F + GL AD V+Y+  ++  C+ G +  A+  ++
Sbjct: 351 NYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIE 410

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
            M   G+RPN +T+NS+ID F       C + ++++     K+ A         +K V  
Sbjct: 411 RMESFGLRPNSITFNSLIDKF-------CDMKEMDKAEEWVKKMA---------EKGVTP 454

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
           +  T N +I  +G+L           +RC Q       + ++M ++ +KPNVV++ +++N
Sbjct: 455 SVETYNTLIDGYGKLCTF--------DRCFQ-------ILEQMEEIGVKPNVVSYGSLIN 499

Query: 654 ACSRCNSFEDASMLLEEL----RLFDNQVYG--VAHGLLMGYRDNIWVQALSLFDEVKLM 707
              +     +A ++L ++     L + QVY   +    ++G   +    AL  FDE+   
Sbjct: 500 CLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKD----ALRFFDEMMRS 555

Query: 708 DSSTASAFYNALTDMLWHFGQKRGAQ 733
           + S     YN L D L   G+   A+
Sbjct: 556 EISPTLVTYNVLIDGLCKKGKLTEAE 581



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 201/410 (49%), Gaps = 8/410 (1%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +LK+ E      D YT+  L   L    + + A++ +  A ++  R N+     S +++ 
Sbjct: 303 LLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYT--GSILLNG 360

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + GKV+ A+ I +     G       ++  ++ Y R G   +AI     M+ + L+PN
Sbjct: 361 LCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPN 420

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
            +T+N++ID  C    +D     E    M   GV P   T+N+L+    +   ++    +
Sbjct: 421 SITFNSLIDKFCDMKEMD--KAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQI 478

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             +M   G+  ++ +Y +L++ +CK  ++  A  ++ +M  + + PN   Y+ +IDG   
Sbjct: 479 LEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCM 538

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G++ DAL  F EM    I    V+YN ++    K G+  EA     ++ SSG   D +T
Sbjct: 539 VGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVIT 598

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN+L+ GY   G   +   ++E MK   + P + TY  LI   SK G+ +   +++ E  
Sbjct: 599 YNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGI-ELVEKLYNEML 657

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           Q  L  D V+Y+A+I    + G  + A SL   M  +GI P+ +TYNS+I
Sbjct: 658 QMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLI 707



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 166/350 (47%), Gaps = 2/350 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  ++E A  +G     Y  S L++   + G  ++A  +        L  + V YN  ++
Sbjct: 335 AMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVN 394

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              + G D    +   + M   G++P+ ITFNSL+         + A     +M  +G+ 
Sbjct: 395 GYCRIG-DMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVT 453

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
             + TYNTL+D   K    D  F+I+ +M    + PNVV+Y ++I+   K G++ +A  +
Sbjct: 454 PSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIV 513

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
             +M   G+  +   YN ++     +G+ ++AL    EM  S I    VTYN L+ G  K
Sbjct: 514 LRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCK 573

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           +GK  E      Q+ +   SP+++TY++LI  Y+  G   + + ++   K  G+K  V  
Sbjct: 574 KGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRT 633

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           Y  LI    K G +E    L +EM +  + P+ V YN++I  +     T+
Sbjct: 634 YHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQ 682



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 202/438 (46%), Gaps = 49/438 (11%)

Query: 144 DILKKFEFKLCGADD--YTFLLRELGNRGEWSKAIQCFAFAVKREE----RKNDQGKLAS 197
           +ILKKF      AD+  Y   +      G+ +KAI      ++R E    R N      +
Sbjct: 372 EILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAI----LTIERMESFGLRPN--SITFN 425

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++I     + ++D A+   +    +G   +V  ++ LI  YG+         +   M+  
Sbjct: 426 SLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEI 485

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
            +KPN+V+Y ++I+   K G   +  + +  DM+  GV P+   +N L+   C  G + +
Sbjct: 486 GVKPNVVSYGSLINCLCKDGKILEAEI-VLRDMICRGVLPNAQVYNMLIDGSCMVGKVKD 544

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           A R  F+EM+   I   + TYN L+D +CK  ++  A + + ++ +   SP+V+TY+++I
Sbjct: 545 ALR-FFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLI 603

Query: 377 DGYAKAGRLDDALNMFSEMKFLGI-----------------GL----------------- 402
            GYA AG +   L ++  MK LGI                 G+                 
Sbjct: 604 SGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLP 663

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           DRV YN ++  YA++G  ++A  + + M   GI  D +TYN+L+ G+ ++GK   ++ + 
Sbjct: 664 DRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLV 723

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
             MKA  ++P   TY  L+  +     +  A   +RE  +     +  + + L   L + 
Sbjct: 724 NNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQE 783

Query: 523 GLVESAVSLLDEMTKEGI 540
           G ++    +  EM  +GI
Sbjct: 784 GRLQEVQVICSEMNVKGI 801



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 75/167 (44%)

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
           ++FS      I L     + +LS+  K     EA+ + + M   G     V+ + L    
Sbjct: 92  DLFSCFSACSIPLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCL 151

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
             + ++ +V  +F +++      +   Y+  I    K    K  M+     ++ G++ +V
Sbjct: 152 VNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNV 211

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +Y+ LI  LC+   +  A  + DEM    +  ++VTYN++ID + +
Sbjct: 212 FIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCK 258


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/542 (25%), Positives = 243/542 (44%), Gaps = 86/542 (15%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +I +  R+ + D+A +++           +Y+F+ LI  +        ++S F  + 
Sbjct: 109 CNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168

Query: 256 RYNLKPNLVTYNAVI------DACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLL 306
           +   +P++VT+N ++      D   +    F ++VE   +FD M+  G+ P  ITFN+L+
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLI 228

Query: 307 -AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA------- 358
             +C  G + EAA  L N+MV +G+  D+ TY T+++ +CK      A  +++       
Sbjct: 229 NGLCLEGRVLEAAA-LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 287

Query: 359 ----------------------------EMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
                                       EM  K I+PNV TY+ MIDG+   GR  DA  
Sbjct: 288 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 347

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +  +M    I  D +++N ++S   K G+  EA  +C EM    I  D VTYN+++ G+ 
Sbjct: 348 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 407

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K  ++D+ + MF+ M     SP+++T++T+IDVY +     E MQ+ RE  + GL A+  
Sbjct: 408 KHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 463

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER- 569
            Y+ LI   C+   + +A  L  EM   G+ P+ +T N ++  F  +   E  ++  E  
Sbjct: 464 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 523

Query: 570 -----DLGKQKESANLDAMCSQDDKD-------------VQEAGRTDNQIIKVF-GQLVA 610
                DL     +  +  MC     D             V+   +T N +I  F G+   
Sbjct: 524 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 583

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
             A                  +F KM     +P+  T++ ++  C +    + +  L+ E
Sbjct: 584 SDANV----------------LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 627

Query: 671 LR 672
           +R
Sbjct: 628 MR 629



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 181/358 (50%), Gaps = 5/358 (1%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + SA+I  L + G    A+ +F   L +G    V+ ++ +I  +   G   +A  +   M
Sbjct: 293 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 352

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               + P+++T+NA+I A  K G  F+   ++ D+ML   + PD +T+NS++    +   
Sbjct: 353 IEREINPDVLTFNALISASVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 411

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           ++ A+++F+ M       D+ T+NT++D  C+  ++D   +++ E+  + +  N  TY+T
Sbjct: 412 FDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 467

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I G+ +   L+ A ++F EM   G+  D ++ N +L  + +  + EEAL + + ++ S 
Sbjct: 468 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 527

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I  D V YN ++ G  K  K DE   +F  +    V P++ TY+ +I  +       +A 
Sbjct: 528 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 587

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            +F + K  G + D   Y+ LI    K G ++ ++ L+ EM   G   +  T   + D
Sbjct: 588 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 645



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 139/280 (49%), Gaps = 10/280 (3%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           ++ FD M+R+      +  N ++ V  R    + A +L+ +M  R I  +I+++N L+  
Sbjct: 91  IDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKC 150

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM-------- 395
            C   ++  +     ++      P+VVT++T++ G     R+ +AL +F  M        
Sbjct: 151 FCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFD 210

Query: 396 KFLGIGLDRV--SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           + + IGL  V  ++NT+++     GR  EA  +  +M   G+  D VTY  ++ G  K G
Sbjct: 211 QMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 270

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
                  +  +M+   + P+++ YS +ID   K G + +A  +F E  + G+  +V  Y+
Sbjct: 271 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 330

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            +ID  C  G    A  LL +M +  I P+V+T+N++I A
Sbjct: 331 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 370


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 239/486 (49%), Gaps = 22/486 (4%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+   R  + DL   +F   L  G G  V++++ALI  + + G   +A  +F  M+   
Sbjct: 195 LINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQG 254

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           + PN+VTY+++I+   K   +      +   M+  GV+P+ +T+N L+   S  G+W+ +
Sbjct: 255 IMPNVVTYSSLINGLCKTK-EMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKES 313

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +F EM    +  D+   N+ + A+CK  ++  A +I   M  K   P+V++Y  ++ G
Sbjct: 314 VRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHG 373

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           YA AG +    N+F+ M   G+  DR  +NT+++ YA+LG  +++LL+ ++M   G+  D
Sbjct: 374 YATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPD 433

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            +T++ ++  + + G+ D+    F  M    V P+   YS LI          +A ++  
Sbjct: 434 IITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELIS 493

Query: 499 EFKQAGLKADVV-LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           +    G+    +  ++++I+ LCK G V     ++D +   G RPN++T+NS++D +   
Sbjct: 494 DMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGY--- 550

Query: 558 ATTECTVDDVERDLG--KQKESANLDAMCSQDDKDVQ---EAGRTDNQIIKVFGQLVAEK 612
               C V +++  +G     ES  ++      +  V    + GR D+ +      L    
Sbjct: 551 ----CLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRV 606

Query: 613 AGQGKKEN-------RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
                  N       + R+ I+    +F +M +  +  ++ T++ +L    R N  ++A+
Sbjct: 607 TLTSVSYNIILHGLFQARRTIVA-KEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEAN 665

Query: 666 MLLEEL 671
           MLLE+L
Sbjct: 666 MLLEKL 671



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 259/559 (46%), Gaps = 70/559 (12%)

Query: 204 GRLGKVDLAKNIF-ETALNEGYGNTVYAFSALISAYGR---SGYCQE----AISVFNSMK 255
           G LG  D A+++F E  L           + L+SA  R   S  C++    A+ +F  M 
Sbjct: 120 GTLGPDD-ARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMD 178

Query: 256 RY---NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           R       P + TYN +I+ C +        + +F  +LR G+ PD  ++N+L+   S+ 
Sbjct: 179 RCACPEAAPTIYTYNILIN-CYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKE 237

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  + A +LF +M  +GI  ++ TY++L++ +CK  +MD A  ++ +M    + PN +TY
Sbjct: 238 GEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTY 297

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +I GY+ +G   +++ +F EM    +  D  + N+ ++   K GR +EA  +   M  
Sbjct: 298 NCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVL 357

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G + D ++Y ALL GY   G    +  +F  M  + V P+   ++TLI+ Y++ G+  +
Sbjct: 358 KGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDK 417

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           ++ +F +  + G+  D++ +S +I A C+ G ++ A+   + M   G+ P+   Y+ +I 
Sbjct: 418 SLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQ 477

Query: 553 AFGRSATTECTVDDVERDLGKQKE------------------SANLDAMCSQ----DDKD 590
                   +C      RDL K KE                  ++ ++ +C +    + KD
Sbjct: 478 G-------QCN----RRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKD 526

Query: 591 VQE----AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
           V +     G+  N I   F  LV      G  +          +G+   M  + ++P++ 
Sbjct: 527 VVDLIIHTGQRPNLI--TFNSLVDGYCLVGNMKE--------AVGLLDSMESVGVEPDIY 576

Query: 647 TFSAILNACSRCNSFEDA-----SMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLF 701
           T++ +++   +    +DA      ML + + L       + HGL    R    + A  +F
Sbjct: 577 TYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRT---IVAKEMF 633

Query: 702 DEVKLMDSSTASAFYNALT 720
            E  +++S  A + +   T
Sbjct: 634 HE--MIESGMAVSIHTYAT 650



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 201/408 (49%), Gaps = 14/408 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-----SAMISILGRLGKVDLAK 213
           Y  L+      GE  KA   F    K EE    QG +      S++I+ L +  ++D A+
Sbjct: 227 YNALIDGFSKEGEVDKAHDLF---YKMEE----QGIMPNVVTYSSLINGLCKTKEMDKAE 279

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
            +    +  G       ++ LI  Y  SG  +E++ VF  M    L P++   N+ + A 
Sbjct: 280 RVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTAL 339

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
            K G   K   +IFD M+  G +PD I++ +LL   +  G      NLFN MV  G+  D
Sbjct: 340 CKHG-RIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPD 398

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
              +NTL++A  +   MD +  +  +M  + ++P+++T+ST+I  + + GRLDDA+  F+
Sbjct: 399 RHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFN 458

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT-YNALLGGYGKQ 452
            M   G+  D   Y+ ++          +A  +  +M S GI    +  + +++    K+
Sbjct: 459 HMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKE 518

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G+  E + + + +      PNL+T+++L+D Y   G  KEA+ +    +  G++ D+  Y
Sbjct: 519 GRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTY 578

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           + L+D  CK+G ++ A++L  +M  + +    V+YN I+    ++  T
Sbjct: 579 NTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRT 626



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 182/396 (45%), Gaps = 41/396 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+   RLG +D +  +FE    +G    +  FS +ISA+ R G   +A+  FN M  
Sbjct: 403 NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 462

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGV-------------------- 295
             + P+   Y+ +I   C +   D     E+  DML  G+                    
Sbjct: 463 TGVPPDTAVYSCLIQGQCNRR--DLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR 520

Query: 296 ----------------QPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                           +P+ ITFNSL+   C  G + EA   L + M   G++ DI+TYN
Sbjct: 521 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAV-GLLDSMESVGVEPDIYTYN 579

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+D  CK  ++D A  +  +M  K ++   V+Y+ ++ G  +A R   A  MF EM   
Sbjct: 580 TLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIES 639

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+ +   +Y TVL    +    +EA ++ +++ S  ++ D +T+N ++    K G+  E 
Sbjct: 640 GMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEA 699

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
           + +F  +    + P +LTY  +I    K   +++A  +F   +++    D  + + +I  
Sbjct: 700 KELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRM 759

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           L   G V  A + L ++ K+GI P   T + +I  F
Sbjct: 760 LLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLF 795



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 161/338 (47%), Gaps = 8/338 (2%)

Query: 202 ILGRLGKVDL--AKNIFETALNEGYGN-TVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           I G+  + DL  AK +    L++G     +  F+++I+   + G   E   V + +    
Sbjct: 476 IQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 535

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            +PNL+T+N+++D  C  G  + K  V + D M   GV+PD  T+N+L+    + G  + 
Sbjct: 536 QRPNLITFNSLVDGYCLVG--NMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDD 593

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  LF +M+H+ +     +YN +L  + +  +  +A E+  EM    ++ ++ TY+T++ 
Sbjct: 594 ALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLG 653

Query: 378 GYAKAGRLDDALNMFSEMKF-LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           G  +    D+A NM  E  F + +  D +++N V+    K+GR +EA  +   + + G+ 
Sbjct: 654 GLCRNNCTDEA-NMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLV 712

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              +TY  ++    K+  +++   +F  M+    +P+    + +I +    G   +A   
Sbjct: 713 PTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNY 772

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
             +  + G+  +    S LI     NG     + LL E
Sbjct: 773 LSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 810


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/517 (25%), Positives = 248/517 (47%), Gaps = 40/517 (7%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           Y   +R  G +G+  +A+  F    +R +  N    + S  A+++IL   G  + A  ++
Sbjct: 158 YVEAMRFYGRKGKIQEAVDTF----ERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVY 213

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
               ++   + VY ++  I ++ R+G    A+ +  +M       N V Y  V+    + 
Sbjct: 214 MRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEF 273

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G D     E+FD+ML   + PD  TFN L+ A+C +G + E+ R LF++++ RG+  ++F
Sbjct: 274 G-DNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESER-LFDKVLKRGVCPNLF 331

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           T+N  +  +CK   +D A  ++  +  + + P+VVTY+T+I G  +  R+ +A     +M
Sbjct: 332 TFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKM 391

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G   +  +YN+++  Y K G   +A  + K+    G + D  TY +L+ G+ + G  
Sbjct: 392 VNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDP 451

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D+   +F+      + P+++ Y+TLI    + GL   A+Q+  E  + G K D+  Y+ +
Sbjct: 452 DQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLI 511

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           I+ LCK G +  A  L+ +   +G  P++ TYN+++D + R    +  ++ V R      
Sbjct: 512 INGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNR------ 565

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
                  M SQ        G T + I   +  L+       K E         ++ +F+ 
Sbjct: 566 -------MWSQ--------GMTPDVI--TYNTLLNGLCKTAKSEE--------VMEIFKA 600

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           M +    PN++T++ I+ +        +A  LL E++
Sbjct: 601 MTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMK 637



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 196/401 (48%), Gaps = 4/401 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +   ++ L   G   +A++     V RE  + D     + +I  L R  +V  A+     
Sbjct: 333 FNIFIQGLCKEGSLDRAVRLLG-CVSREGLRPDVVTY-NTVICGLCRKSRVVEAEECLHK 390

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +N G+    + ++++I  Y + G   +A  +         KP+  TY ++++   + G 
Sbjct: 391 MVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDG- 449

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           D    + +F D L  G++P  I +N+L+    + GL   A  L NEM  +G   DI+TYN
Sbjct: 450 DPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYN 509

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            +++ +CK   +  A  ++ +   K   P++ TY+T++DGY +  +LD A+ + + M   
Sbjct: 510 LIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQ 569

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D ++YNT+L+   K  + EE + + K M   G   + +TYN ++       K +E 
Sbjct: 570 GMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEA 629

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF-KQAGLKADVVLYSALID 517
             +  +MK+  ++P+++++ TLI  + K G    A  +FR   KQ  +      Y+ +I 
Sbjct: 630 VDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIIS 689

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           A  +   ++ A+ L  EM K G  P+  TY  +ID F ++ 
Sbjct: 690 AFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTG 730



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 178/350 (50%), Gaps = 8/350 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G  D A  +F+  L +G   ++  ++ LI    + G    A+ + N M     KP++ TY
Sbjct: 449 GDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTY 508

Query: 267 NAVIDACGKGGV--DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           N +I+   K G   D  H++    D +  G  PD  T+N+L+    R    ++A  L N 
Sbjct: 509 NLIINGLCKMGCLSDANHLI---GDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNR 565

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M  +G+  D+ TYNTLL+ +CK A+ +   EI   M  K  +PN++TY+T+I+    + +
Sbjct: 566 MWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKK 625

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS-GIRKDAVTYN 443
           +++A+++  EMK  G+  D VS+ T+++ + K+G  + A  + + ME    +     TYN
Sbjct: 626 VNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYN 685

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            ++  + +Q       R+F +MK +   P+  TY  LID + K G   +  +   E  + 
Sbjct: 686 IIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEK 745

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           G    +  +  +++ LC    V+ AV ++  M ++ I P+ V  N+I +A
Sbjct: 746 GFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV--NTIFEA 793



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 110/261 (42%), Gaps = 71/261 (27%)

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMK-------FLGIGLDRV---------------- 405
           + TY +M+      G+ ++  N+ SEM+         G+ ++ +                
Sbjct: 119 LFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTF 178

Query: 406 -------------SYNTVLSIYAKLGRFEE------------------------------ 422
                        SYN +++I  + G F +                              
Sbjct: 179 ERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRT 238

Query: 423 -----ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
                AL + + M   G   +AV Y  ++ G+ + G  D  R +F++M   C+ P++ T+
Sbjct: 239 GRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTF 298

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           + L+    K G   E+ ++F +  + G+  ++  ++  I  LCK G ++ AV LL  +++
Sbjct: 299 NKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSR 358

Query: 538 EGIRPNVVTYNSIIDAFGRSA 558
           EG+RP+VVTYN++I    R +
Sbjct: 359 EGLRPDVVTYNTVICGLCRKS 379



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/158 (18%), Positives = 65/158 (41%), Gaps = 36/158 (22%)

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC----------------------- 469
            G +    TY ++L   G  GK++E+  +  +M+++                        
Sbjct: 113 QGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQ 172

Query: 470 -------------VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
                          P++ +Y+ ++++  + G + +A +++   K   +++DV  Y+  I
Sbjct: 173 EAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRI 232

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            + C+ G   +A+ LL  M   G   N V Y +++  F
Sbjct: 233 KSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGF 270


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 210/439 (47%), Gaps = 36/439 (8%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           Y  LL+ L +     +A+      +  + R      + S   +I+ L R G++D A  +F
Sbjct: 170 YNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLF 229

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           +  L++G       ++ L+  Y  SG  +EAI +F  M R  ++P++VTYN ++    K 
Sbjct: 230 DEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKN 289

Query: 277 GVD------FKHVV----------------------------EIFDDMLRNGVQPDRITF 302
           G        F  +V                            ++ D M+RNG QPD   F
Sbjct: 290 GRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIF 349

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           N L+   ++ G+ + A   F++M  +G+  +I TY T++DA+C+  ++D A      + +
Sbjct: 350 NILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLIS 409

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
           + ++PN V + T+I G     + D A  +  EM   GI  + + +NT+L+   K G    
Sbjct: 410 EGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTR 469

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A  +   M    ++ D +TY  L+ GY   GK DE  ++ E M  D V PN +TY+T+I+
Sbjct: 470 AKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIIN 529

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            Y K G  ++A  +FR+    G+   +V+YS ++  L +   + +A  L   M K GI+ 
Sbjct: 530 GYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKL 589

Query: 543 NVVTYNSIIDAFGRSATTE 561
            + TYN I+    ++  T+
Sbjct: 590 PIGTYNIILQGLCQNNCTD 608



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 236/503 (46%), Gaps = 45/503 (8%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           +++  ++ +SA  R      A+S+FN M R     +L TY+ VI  C + G         
Sbjct: 65  SIFDLNSALSAVARESP-AVALSLFNRMPR----ADLCTYSIVIGCCSRAG-HLDLAFAA 118

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
              ++R G     ITF+ LL  +C      +A       M   G   + F+YN LL  +C
Sbjct: 119 LGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLC 178

Query: 346 KGAQMDLAFEIMAEMPAKN----ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
              +   A  ++  M A +      P+VV+Y+T+I+G  + G+LD A  +F EM   G+ 
Sbjct: 179 DENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMS 238

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + ++YN +L  Y   G+ +EA+ + ++M   G+  D VTYN L+    K G+  E R++
Sbjct: 239 PNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKV 298

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F+ M      P+   Y TL+  Y+  G   +  Q+     + G + D  +++ LI A  K
Sbjct: 299 FDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAK 358

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-- 579
           +G+V+ A+    +M ++G+ PN+VTY +++DA  R    +  +   +R L  +  + N  
Sbjct: 359 HGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDR-LISEGLTPNGV 417

Query: 580 -----LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR----------CRQ 624
                +  +C+ D  D  E             +L  E  G+G   N           C++
Sbjct: 418 VFRTLIHGLCACDKWDKAE-------------ELAVEMIGRGICPNTIFFNTLLNHLCKE 464

Query: 625 EILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH 683
            ++     +F  M ++ ++ +V+T++ +++        ++A+ LLE + L   +   V +
Sbjct: 465 GMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTY 524

Query: 684 GLLM-GYRDNIWVQ-ALSLFDEV 704
             ++ GY  N  ++ A SLF ++
Sbjct: 525 NTIINGYCKNGRIEDACSLFRQM 547



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 200/462 (43%), Gaps = 71/462 (15%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   G   +A + F   VK+  + +    +   ++      G +     + + 
Sbjct: 279 YNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSS--IYGTLLHGYATEGYLVQMHQLLDV 336

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +  G     Y F+ LI AY + G   EA+  F+ M++  L PN+VTY  V+DA C  G 
Sbjct: 337 MVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGK 396

Query: 278 VD--------------------FKHVV-------------EIFDDMLRNGVQPDRITFNS 304
           VD                    F+ ++             E+  +M+  G+ P+ I FN+
Sbjct: 397 VDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNT 456

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           LL    + G+   A+N+F+ MV   +  D+ TY TL+D  C   ++D A +++  M    
Sbjct: 457 LLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDG 516

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           + PN VTY+T+I+GY K GR++DA ++F +M   G+    V Y+T+L    +  R   A 
Sbjct: 517 VKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAK 576

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYG---------------------------------- 450
            +   M   GI+    TYN +L G                                    
Sbjct: 577 ELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDAL 636

Query: 451 -KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            K G++DE + +F  + A  + PN++TY  ++    + GL +E   +F   ++ G  AD 
Sbjct: 637 LKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADS 696

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            + +AL+  L + G V  A   L ++ +        T  S++
Sbjct: 697 RMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLV 738


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 147/562 (26%), Positives = 266/562 (47%), Gaps = 37/562 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI   G  GK + A ++ E    +G   +V +++ ++S  GR G   EA+  F  MK+
Sbjct: 344 NTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK 403

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            +  PNL TYN +ID   K G   +  + + D M   G+ P+ IT N ++    +    +
Sbjct: 404 -DAIPNLSTYNIMIDMLCKAG-KLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLD 461

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A ++F  + H+    D  TY +L++ + +  ++D A+++  +M   N  PN V Y+++I
Sbjct: 462 DACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             + K GR +D   +++EM  LG   D +  NT +    K G  E+   + +E+++ G  
Sbjct: 522 RNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFI 581

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            DA +Y  L+ G  K G   E   +F  MK      +   Y+T+ID + K G   +A Q+
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             E K  G +  VV Y ++ID L K   ++ A  L +E   +GI  NVV Y+S+ID FG+
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
                         +G+  E+  +        +++ + G T N  +  +  L+       
Sbjct: 702 --------------VGRIDEAYLI-------MEELMQKGLTPN--VYTWNCLLDALV--- 735

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL--F 674
            K     + ++C    FQ M  LK  PN +T+S +++   +   F  A +  +E++   F
Sbjct: 736 -KAEEISEALVC----FQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790

Query: 675 DNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
              V+     +    +    V+A +LF++ K       SA YNA+ + L +  +   A  
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850

Query: 735 VVLEGKRRQVWENVWSESCLDL 756
           +  E + +    ++++++C+ L
Sbjct: 851 LFEEARLKGC--SIYTKTCVVL 870



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 224/481 (46%), Gaps = 39/481 (8%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L + +I +  R G+VD A ++ +   +      V  ++  I  +G++G    A   F+ M
Sbjct: 237 LFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEM 296

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           K   L  + VTY ++I    K        VE+F+ M +N   P    +N+++      G 
Sbjct: 297 KANGLVLDDVTYTSMIGVLCKAD-RLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGK 355

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           +E A +L      +G    + +YN +L  + +  Q+D A +   EM  K+  PN+ TY+ 
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNI 414

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           MID   KAG+L+ AL +   MK  G+  + ++ N ++    K  R ++A  + + ++   
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKT 474

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
            R DAVTY +L+ G G+ G+ DE  +++EQM      PN + Y++LI  + K G  ++  
Sbjct: 475 CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGH 534

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +I+ E  + G   D++L +  +D + K G +E   +L  E+   G  P+  +Y  +I   
Sbjct: 535 KIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGL 594

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            ++       +  E     +++   LD              R  N +I  F      K+G
Sbjct: 595 VKAGFAH---EAYELFYTMKEQGCVLDT-------------RAYNTVIDGFC-----KSG 633

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIK---PNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +  K              +Q + ++K K   P VVT+ ++++  ++ +  ++A ML EE 
Sbjct: 634 KVNK-------------AYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 680

Query: 672 R 672
           +
Sbjct: 681 K 681



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 129/582 (22%), Positives = 255/582 (43%), Gaps = 80/582 (13%)

Query: 187 ERKNDQGKLASA---MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGY 243
           ER  D+     A   ++ ++ R  K +  + I E     G+G +      ++ ++ +S  
Sbjct: 121 ERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRK 180

Query: 244 CQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
            +EA +   +M++   +P    Y  +I A                               
Sbjct: 181 LREAFTFIQTMRKLKFRPAFSAYTNLIGALST---------------------------- 212

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
                 SR    +    LF +M   G   ++  + TL+    +  ++D A  ++ EM + 
Sbjct: 213 ------SRDS--DCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSN 264

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
           ++ P+VV Y+  ID + KAG++D A   F EMK  G+ LD V+Y +++ +  K  R  EA
Sbjct: 265 SLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEA 324

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
           + + + M+ +     A  YN ++ GYG  GK+++   + E+ +     P++++Y+ ++  
Sbjct: 325 VELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSC 384

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             + G   EA++ F E K+  +  ++  Y+ +ID LCK G +E+A+ + D M   G+ PN
Sbjct: 385 LGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPN 443

Query: 544 VVTYNSIIDAFGRSATTE--CTVDDVERDLGKQKESANLDAM--CSQDDKDVQEAGRTD- 598
           V+T N ++D   ++   +  C++ +     G   ++   DA+  CS  +  +   GR D 
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFE-----GLDHKTCRPDAVTYCSLIE-GLGRHGRVDE 497

Query: 599 -----------NQIIK--VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
                      NQI    V+  L+      G+KE+  +        ++ +M +L   P++
Sbjct: 498 AYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHK--------IYNEMLRLGCSPDL 549

Query: 646 VTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGV-AHGLLMGYRDNIWVQALSL 700
           +  +  ++   +    E    L +E++    + D + Y +  HGL+   +     +A  L
Sbjct: 550 LLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLV---KAGFAHEAYEL 606

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
           F  +K       +  YN + D     G+   A  ++ E K +
Sbjct: 607 FYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 193/382 (50%), Gaps = 40/382 (10%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V+A++ALI+ + +     +A  V + M+  +  P+ VTYN +I + C +G +D    +++
Sbjct: 154 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL--ALKV 211

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
            D +L +  QP  IT+  L+ A    GG+ EA + L +EM+ RG+  D+FTYNT++  +C
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALK-LLDEMLSRGLKPDMFTYNTIIRGMC 270

Query: 346 KGAQMDLAFE-----------------------------------IMAEMPAKNISPNVV 370
           K   +D AFE                                   +M +M ++   PNVV
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TYS +I    + G++++A+N+   MK  G+  D  SY+ +++ + + GR + A+   + M
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
            S G   D V YN +L    K GK D+   +F ++     SPN  +Y+T+       G  
Sbjct: 391 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 450

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             A+ +  E    G+  D + Y+++I  LC+ G+V+ A  LL +M      P+VVTYN +
Sbjct: 451 IRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIV 510

Query: 551 IDAFGRSATTECTVDDVERDLG 572
           +  F ++   E  +D ++  +G
Sbjct: 511 LLGFCKAHRIEDAIDVLDSMVG 532



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 177/358 (49%), Gaps = 3/358 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI  L   GK+DLA  + +  L++    TV  ++ LI A    G   EA+ + + M    
Sbjct: 195 MIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRG 254

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           LKP++ TYN +I   C +G VD     E+  ++   G +PD I++N LL      G WE 
Sbjct: 255 LKPDMFTYNTIIRGMCKEGMVD--RAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEE 312

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
              L  +M     D ++ TY+ L+  +C+  +++ A  ++  M  K ++P+  +Y  +I 
Sbjct: 313 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 372

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            + + GRLD A+     M   G   D V+YNTVL+   K G+ ++AL +  ++   G   
Sbjct: 373 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 432

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           ++ +YN +       G       M  +M ++ + P+ +TY+++I    + G+  +A ++ 
Sbjct: 433 NSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELL 492

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            + +       VV Y+ ++   CK   +E A+ +LD M   G RPN  TY  +I+  G
Sbjct: 493 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIG 550



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 217/445 (48%), Gaps = 24/445 (5%)

Query: 240 RSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV---VEIFDDMLRNGVQ 296
           RSG   E++ +  +M R    P+++    +I    KG    ++V   V + + + + G Q
Sbjct: 97  RSGNYIESLHLLETMVRKGYNPDVILCTKLI----KGFFTLRNVPKAVRVMEILEKFG-Q 151

Query: 297 PDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           PD   +N+L+   C    + +A R + + M  +    D  TYN ++ ++C   ++DLA +
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATR-VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++ ++ + N  P V+TY+ +I+     G +D+AL +  EM   G+  D  +YNT++    
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K G  + A  + + +E  G   D ++YN LL     QGK++E  ++  +M ++   PN++
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TYS LI    + G  +EAM + +  K+ GL  D   Y  LI A C+ G ++ A+  L+ M
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKESANLDAMCSQDDKDVQE 593
             +G  P++V YN+++    ++   +  ++   +  ++G    S++ + M S     +  
Sbjct: 391 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA----LWS 446

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK-------MHKLKIKPNVV 646
           +G     +  +  ++V+      +         LC  G+  K       M   +  P+VV
Sbjct: 447 SGDKIRALHMIL-EMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVV 505

Query: 647 TFSAILNACSRCNSFEDASMLLEEL 671
           T++ +L    + +  EDA  +L+ +
Sbjct: 506 TYNIVLLGFCKAHRIEDAIDVLDSM 530



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 150/302 (49%), Gaps = 13/302 (4%)

Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMI 200
           ++++  E K C  D   Y  LLR L N+G+W +  +      K    K D   +  S +I
Sbjct: 280 EMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEK---LMTKMFSEKCDPNVVTYSILI 336

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           + L R GK++ A N+ +    +G     Y++  LI+A+ R G    AI    +M      
Sbjct: 337 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 396

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           P++V YN V+   C  G  D    +EIF  +   G  P+  ++N++ +     G    A 
Sbjct: 397 PDIVNYNTVLATLCKNGKAD--QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 454

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           ++  EMV  GID D  TYN+++  +C+   +D AFE++ +M +    P+VVTY+ ++ G+
Sbjct: 455 HMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGF 514

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            KA R++DA+++   M   G   +  +Y  ++      G   EA+    E+ +  +R +A
Sbjct: 515 CKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAM----ELANDLVRINA 570

Query: 440 VT 441
           ++
Sbjct: 571 IS 572



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/399 (23%), Positives = 175/399 (43%), Gaps = 40/399 (10%)

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C+      +  ++  M  K  +P+V+  + +I G+     +  A+ +   ++  G   D 
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +YN +++ + K+ R ++A  V   M S     D VTYN ++G    +GK D   ++ +Q
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           + +D   P ++TY+ LI+     G   EA+++  E    GLK D+  Y+ +I  +CK G+
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAM 583
           V+ A  ++  +  +G  P+V++YN ++ A                + GK +E   L   M
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRAL--------------LNQGKWEEGEKLMTKM 320

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
            S+         + D  ++  +  L+      GK E          + + + M +  + P
Sbjct: 321 FSE---------KCDPNVV-TYSILITTLCRDGKIEE--------AMNLLKLMKEKGLTP 362

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWVQALS 699
           +  ++  ++ A  R    + A   LE +     L D   Y      L   ++    QAL 
Sbjct: 363 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC--KNGKADQALE 420

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           +F ++  +  S  S+ YN +   LW  G K  A  ++LE
Sbjct: 421 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 459


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 207/420 (49%), Gaps = 7/420 (1%)

Query: 145 ILKK-FEFKLCGADDYTFLLRELGN--RGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           I+KK FE ++   D +T+    LG+  + +   A+Q F    K     N      S +I+
Sbjct: 407 IMKKVFESEM-SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV--TYSTLIN 463

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            L   G+V+ A ++    +  G   T +  +  I A    G  ++A  +F  MK    +P
Sbjct: 464 GLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEP 523

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           N+ TY A+I      G+  K  + +F  M R+GV P+ +T+N+L+ +       + A  +
Sbjct: 524 NVYTYTALISGLCVSGL-LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 582

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            N M   G+  +I TYN ++   C       A  +M  M  +  S N+VTY+T+I GY  
Sbjct: 583 LNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 642

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           +G    AL +   M+  G   D  SY  ++  + K+ + E A  +  EM   G+  + VT
Sbjct: 643 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 702

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y AL+ GY K  K D    + E MK     PN+ TY+ LI   +K   +  A ++ +   
Sbjct: 703 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 762

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + G+  +VV Y+A+ID LCKNG    A+ + ++M ++G  PN++TY+S+I A G+    E
Sbjct: 763 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 822



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 184/390 (47%), Gaps = 36/390 (9%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I  L  +G  + A  +F    N+G    VY ++ALIS    SG  + AI +F+ M R  +
Sbjct: 497 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 556

Query: 260 KPNLVTYNAVIDAC----------------GKGGV------------------DFKHVVE 285
            PN VTYNA+I+                  G+ G+                  D K  + 
Sbjct: 557 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAML 616

Query: 286 IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           + ++ML+ G   + +T+N+++   C  G    A R + + M   G   D ++Y  L+   
Sbjct: 617 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR-ILDLMRDGGCKPDEWSYTELICGF 675

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK ++M+ AF +  EM    + PN VTY+ +IDGY K  +LD A ++   MK  G   + 
Sbjct: 676 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 735

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +YN ++    K   F  A  +CK M   GI  + VTY A++ G  K G       MF +
Sbjct: 736 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 795

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M      PNLLTYS+LI    + G  +EA  +F E ++ GL  D + Y  +I+A   +G 
Sbjct: 796 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 855

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           VE A + L  M K G +P + TY  +I   
Sbjct: 856 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 885



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 149/555 (26%), Positives = 254/555 (45%), Gaps = 56/555 (10%)

Query: 127 EALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKRE 186
           ++ H   A AR  +S  D+L +   ++ G   Y+ LL  L   G         A  + R 
Sbjct: 323 KSCHSKEAMART-MSFLDMLSQSGLRM-GLFAYSALLIHLSRLGM-------TAAVMDRY 373

Query: 187 ERKNDQGK-----LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
            R   +G      + +A+I+ L + G V  A+ I +           + ++++I  + R 
Sbjct: 374 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 433

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD---DMLRNGVQPD 298
                A+ VFN M +   +PN VTY+ +I+    G  D   V E FD   +M+ +G+ P 
Sbjct: 434 HDLDSALQVFNQMAKEGCEPNTVTYSTLIN----GLCDSGRVNEAFDLIREMILHGILPT 489

Query: 299 RITFNS-LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
             T    ++A+C   G +E A  LF +M ++G + +++TY  L+  +C    + +A  + 
Sbjct: 490 AHTCTGPIIALCDM-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLF 548

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
             M    + PN VTY+ +I+   +  R+  A  + + M   G+  + V+YN ++  Y  L
Sbjct: 549 HRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCIL 608

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G  ++A+LV   M   G   + VTYN ++ GY   G      R+ + M+     P+  +Y
Sbjct: 609 GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 668

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           + LI  + K    + A  +F E    GL  + V Y+ALID  CK+  +++A SLL+ M +
Sbjct: 669 TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 728

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
            G RPNV TYN +I                   L KQ   +  + +C    K + E G  
Sbjct: 729 SGCRPNVQTYNVLIHG-----------------LTKQNNFSGAEELC----KVMIEEG-- 765

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCI-LGVFQKMHKLKIKPNVVTFSAILNACS 656
                 +F  +V   A     +  C+     + L +F KM +    PN++T+S+++ A  
Sbjct: 766 ------IFPNVVTYTA---MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALG 816

Query: 657 RCNSFEDASMLLEEL 671
           +    E+A  L  EL
Sbjct: 817 QEGKVEEAENLFAEL 831



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 214/440 (48%), Gaps = 12/440 (2%)

Query: 248 ISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL- 306
           +S  + + +  L+  L  Y+A++    + G+    V++ +  ML  GVQP+ + +N+++ 
Sbjct: 335 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMT-AAVMDRYHRMLSEGVQPNLLIYNAVIN 393

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
           A+C  G + +A   +  ++    +  D FTY +++   C+   +D A ++  +M  +   
Sbjct: 394 ALCKDGNVADA-ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCE 452

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           PN VTYST+I+G   +GR+++A ++  EM   GI     +    +     +G +E+A  +
Sbjct: 453 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 512

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
             +M++ G   +  TY AL+ G    G       +F +M  D V PN +TY+ LI++  +
Sbjct: 513 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVE 572

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
               K A  +     + GL  ++V Y+ +I   C  G  + A+ +++ M + G   N+VT
Sbjct: 573 NRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 632

Query: 547 YNSIIDAFGRSA--TTECTVDDVERDLG-KQKESANLDAMCS-QDDKDVQEAGRTDNQII 602
           YN+II  +  S   T+   + D+ RD G K  E +  + +C       ++ A    N+++
Sbjct: 633 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 692

Query: 603 KVFGQLVAEKAGQGKKENRCRQEIL-CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
              G    E       +  C+ E L     + + M +   +PNV T++ +++  ++ N+F
Sbjct: 693 DD-GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 751

Query: 662 EDASMLLE---ELRLFDNQV 678
             A  L +   E  +F N V
Sbjct: 752 SGAEELCKVMIEEGIFPNVV 771



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 149/324 (45%), Gaps = 3/324 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+IL    ++  A  +       G    +  ++ +I  Y   G  ++A+ V N+M +
Sbjct: 564 NALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 623

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
                NLVTYN +I   C  G  +    + I D M   G +PD  ++  L+    +    
Sbjct: 624 RGHSANLVTYNTIIKGYCDSG--NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 681

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E+A  LFNEMV  G+  +  TY  L+D  CK  ++D A  ++  M      PNV TY+ +
Sbjct: 682 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 741

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G  K      A  +   M   GI  + V+Y  ++    K G    AL +  +M   G 
Sbjct: 742 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 801

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + +TY++L+   G++GK +E   +F +++   + P+ +TY  +I+ Y   G  + A  
Sbjct: 802 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 861

Query: 496 IFREFKQAGLKADVVLYSALIDAL 519
                 +AG +  +  Y  LI  L
Sbjct: 862 FLGRMIKAGCQPTLWTYGVLIKGL 885



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 151/376 (40%), Gaps = 25/376 (6%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            +A+I    +  K+D A ++ E     G    V  ++ LI    +      A  +   M  
Sbjct: 704  TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE 763

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              + PN+VTY A+ID   K G      +E+F+ M+  G  P+ +T++SL+    + G  E
Sbjct: 764  EGIFPNVVTYTAMIDGLCKNG-STSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 822

Query: 317  AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
             A NLF E+   G+  D  TY  +++A     +++ AF  +  M      P + TY  +I
Sbjct: 823  EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 882

Query: 377  DGYAKAGRL-----------------------DDALNMFS-EMKFLGIGLDRVSYNTVLS 412
             G      L                        DA+++ S ++  L  GL     N ++S
Sbjct: 883  KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 942

Query: 413  IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              +  GR+ EA  +   M S G+  D   YN+LL    +    D    +F+ M       
Sbjct: 943  NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 1002

Query: 473  NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
            +L  Y  LI    +    KEA   F          D V+ + LID L ++G  +  +  L
Sbjct: 1003 HLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFL 1062

Query: 533  DEMTKEGIRPNVVTYN 548
              M      P+   Y 
Sbjct: 1063 HIMETRRYMPSFHIYT 1078


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 147/562 (26%), Positives = 266/562 (47%), Gaps = 37/562 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI   G  GK + A ++ E    +G   +V +++ ++S  GR G   EA+  F  MK+
Sbjct: 344 NTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK 403

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            +  PNL TYN +ID   K G   +  + + D M   G+ P+ IT N ++    +    +
Sbjct: 404 -DAIPNLSTYNIMIDMLCKAG-KLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLD 461

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A ++F  + H+    D  TY +L++ + +  ++D A+++  +M   N  PN V Y+++I
Sbjct: 462 DACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             + K GR +D   +++EM  LG   D +  NT +    K G  E+   + +E+++ G  
Sbjct: 522 RNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFI 581

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            DA +Y  L+ G  K G   E   +F  MK      +   Y+T+ID + K G   +A Q+
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             E K  G +  VV Y ++ID L K   ++ A  L +E   +GI  NVV Y+S+ID FG+
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
                         +G+  E+  +        +++ + G T N  +  +  L+       
Sbjct: 702 --------------VGRIDEAYLI-------MEELMQKGLTPN--VYTWNCLLDALV--- 735

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL--F 674
            K     + ++C    FQ M  LK  PN +T+S +++   +   F  A +  +E++   F
Sbjct: 736 -KAEEISEALVC----FQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790

Query: 675 DNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
              V+     +    +    V+A +LF++ K       SA YNA+ + L +  +   A  
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850

Query: 735 VVLEGKRRQVWENVWSESCLDL 756
           +  E + +    ++++++C+ L
Sbjct: 851 LFEEARLKGC--SIYTKTCVVL 870



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 224/481 (46%), Gaps = 39/481 (8%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L + +I +  R G+VD A ++ +   +      V  ++  I  +G++G    A   F+ M
Sbjct: 237 LFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEM 296

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           K   L  + VTY ++I    K        VE+F+ M +N   P    +N+++      G 
Sbjct: 297 KANGLVLDDVTYTSMIGVLCKAD-RLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGK 355

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           +E A +L      +G    + +YN +L  + +  Q+D A +   EM  K+  PN+ TY+ 
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNI 414

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           MID   KAG+L+ AL +   MK  G+  + ++ N ++    K  R ++A  + + ++   
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKT 474

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
            R DAVTY +L+ G G+ G+ DE  +++EQM      PN + Y++LI  + K G  ++  
Sbjct: 475 CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGH 534

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +I+ E  + G   D++L +  +D + K G +E   +L  E+   G  P+  +Y  +I   
Sbjct: 535 KIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGL 594

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            ++       +  E     +++   LD              R  N +I  F      K+G
Sbjct: 595 VKAGFAH---EAYELFYTMKEQGCVLDT-------------RAYNTVIDGFC-----KSG 633

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIK---PNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +  K              +Q + ++K K   P VVT+ ++++  ++ +  ++A ML EE 
Sbjct: 634 KVNK-------------AYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 680

Query: 672 R 672
           +
Sbjct: 681 K 681



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 129/582 (22%), Positives = 255/582 (43%), Gaps = 80/582 (13%)

Query: 187 ERKNDQGKLASA---MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGY 243
           ER  D+     A   ++ ++ R  K +  + I E     G+G +      ++ ++ +S  
Sbjct: 121 ERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRK 180

Query: 244 CQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
            +EA +   +M++   +P    Y  +I A                               
Sbjct: 181 LREAFTFIQTMRKLKFRPAFSAYTNLIGALST---------------------------- 212

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
                 SR    +    LF +M   G   ++  + TL+    +  ++D A  ++ EM + 
Sbjct: 213 ------SRDS--DCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSN 264

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
           ++ P+VV Y+  ID + KAG++D A   F EMK  G+ LD V+Y +++ +  K  R  EA
Sbjct: 265 SLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEA 324

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
           + + + M+ +     A  YN ++ GYG  GK+++   + E+ +     P++++Y+ ++  
Sbjct: 325 VELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSC 384

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             + G   EA++ F E K+  +  ++  Y+ +ID LCK G +E+A+ + D M   G+ PN
Sbjct: 385 LGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPN 443

Query: 544 VVTYNSIIDAFGRSATTE--CTVDDVERDLGKQKESANLDAM--CSQDDKDVQEAGRTD- 598
           V+T N ++D   ++   +  C++ +     G   ++   DA+  CS  +  +   GR D 
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFE-----GLDHKTCRPDAVTYCSLIE-GLGRHGRVDE 497

Query: 599 -----------NQIIK--VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
                      NQI    V+  L+      G+KE+  +        ++ +M +L   P++
Sbjct: 498 AYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHK--------IYNEMLRLGCSPDL 549

Query: 646 VTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGV-AHGLLMGYRDNIWVQALSL 700
           +  +  ++   +    E    L +E++    + D + Y +  HGL+   +     +A  L
Sbjct: 550 LLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLV---KAGFAHEAYEL 606

Query: 701 FDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
           F  +K       +  YN + D     G+   A  ++ E K +
Sbjct: 607 FYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 233/504 (46%), Gaps = 45/504 (8%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           AF+AL++A+  +G   +A+  F+ M  +  +P    YN ++ A    GV     + +++ 
Sbjct: 139 AFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGV-ILLALALYNR 197

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M+  G  P+R T+N L+    + G+   A  +F+EM+ RGI  ++  Y  LL ++C   +
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A +++  M  K   P+ VTY+  + G  K GR+++A      ++  G  L    Y+ 
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSC 317

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    +  RF+E     K M    I  D V Y  ++ G  + G+ ++     + MK   
Sbjct: 318 LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKG 377

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P+   Y+T++ V    G  + A  +  E  Q  L  D    + +I  LCK GLV+ A+
Sbjct: 378 FVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAM 437

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            + DEM + G  P V+TYN++ID F R               G+ +E+  L         
Sbjct: 438 QIFDEMGEHGCDPTVMTYNALIDGFYRE--------------GRLEEARML--------F 475

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI--LCILGVFQKMHKL-------K 640
              E G   +  ++     +   A Q +     R+ +  +C  G   K +KL        
Sbjct: 476 HKMEMGNNPSLFLR-----LTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSG 530

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYG-VAHGLLMGYRDNIWV 695
           + P+VVT++ ++N   +  + + A  L +EL+L     D   YG +  GLL  +R+N   
Sbjct: 531 VVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREN--- 587

Query: 696 QALSLFDEVKLMDSSTASAFYNAL 719
            A+ LF  +    SS + + YN++
Sbjct: 588 DAMMLFQNILQSGSSPSLSIYNSM 611



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 179/379 (47%), Gaps = 49/379 (12%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           T + ++ ++ A   SG    A++++N M      PN  TYN ++D   K G+     +++
Sbjct: 171 TAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMA-GDALKM 229

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           FD+ML  G+ P+   +  LL+     G  + A  L   M  +G   D  TYN  L  +CK
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 347 GAQMDLAFE--IMAE---------------------------------MPAKNISPNVVT 371
             +++ AF+  +M +                                 M  +NISP+VV 
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+ MI G A+AGR++DAL+    MK  G   D   YNTVL +    G  E A  +  EM 
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML 409

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            + +  D+ T   ++ G  K+G  DE  ++F++M      P ++TY+ LID + + G  +
Sbjct: 410 QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 492 EAMQIFRE---------FKQAGLKADVVLYS----ALIDALCKNGLVESAVSLLDEMTKE 538
           EA  +F +         F +  L A+ V  S     L+  +C++G V  A  LL  +   
Sbjct: 470 EARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 539 GIRPNVVTYNSIIDAFGRS 557
           G+ P+VVTYN++I+   ++
Sbjct: 530 GVVPDVVTYNTLINGLCKA 548



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 199/420 (47%), Gaps = 32/420 (7%)

Query: 143 GDILKKFEFKL-----CGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA- 196
           GD LK F+  L          YT LL  L N G+  +A+Q             D+G L  
Sbjct: 224 GDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLG-------SMKDKGCLPD 276

Query: 197 ----SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
               +A +S L ++G+V+ A        + G+   +  +S LI    ++    E    + 
Sbjct: 277 EVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYK 336

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           +M   N+ P++V Y  +I  C + G   +  +   D M + G  PD   +N++L V    
Sbjct: 337 TMLERNISPDVVLYTIMIRGCAEAG-RIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDH 395

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  E A  L +EM+   +  D  T   ++  +CK   +D A +I  EM      P V+TY
Sbjct: 396 GDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTY 455

Query: 373 STMIDGYAKAGRLDDALNMFSEMK-------FLGIGL------DRVSYNTVLSIYAKLGR 419
           + +IDG+ + GRL++A  +F +M+       FL + L      D  S   ++    + G+
Sbjct: 456 NALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQ 515

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
             +A  + + +  SG+  D VTYN L+ G  K    D   R+F++++   +SP+ +TY T
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL-LDEMTKE 538
           LID   +     +AM +F+   Q+G    + +Y++++ +LC+   +  A++L LD + K+
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK 635



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 152/366 (41%), Gaps = 47/366 (12%)

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
           F+ +A+  A  +  +   ++ ++  ++ AGR  DA+  FS M           YNT+L  
Sbjct: 122 FDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKA 181

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
               G    AL +   M ++G   +  TYN L+ G  KQG   +  +MF++M    + PN
Sbjct: 182 LVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPN 241

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL- 532
           +  Y+ L+      G   EA+Q+    K  G   D V Y+A +  LCK G V  A   L 
Sbjct: 242 VKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLV 301

Query: 533 ---------------------------DE-------MTKEGIRPNVVTYNSIIDAFGRSA 558
                                      DE       M +  I P+VV Y  +I     + 
Sbjct: 302 MLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAG 361

Query: 559 TTECTVD--DVERDLGKQKES----ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
             E  +   DV +  G   ++      L  +C  D  D++ A    +++++    LV + 
Sbjct: 362 RIEDALSFLDVMKKKGFVPDTFCYNTVLKVLC--DHGDLERAHTLRSEMLQ--NNLVLDS 417

Query: 613 AGQGKKE-NRCRQEILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
             Q       C++ ++   + +F +M +    P V+T++A+++   R    E+A ML  +
Sbjct: 418 TTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHK 477

Query: 671 LRLFDN 676
           + + +N
Sbjct: 478 MEMGNN 483



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 124/288 (43%), Gaps = 32/288 (11%)

Query: 386 DDAL-NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           D+A+ +  ++ +  G+     ++  +++ ++  GR  +A+     M+    R  A  YN 
Sbjct: 118 DEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNT 177

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           +L      G       ++ +M A   +PN  TY+ L+D   K G+  +A+++F E    G
Sbjct: 178 ILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRG 237

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           +  +V +Y+ L+ +LC  G ++ AV LL  M  +G  P+ VTYN+ +          C V
Sbjct: 238 IMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL-------CKV 290

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                  G+  E+     M       +   G +      + G   A +  +G        
Sbjct: 291 -------GRVNEAFQRLVMLQDGGFALGLKGYS----CLIDGLFQARRFDEG-------- 331

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                 G ++ M +  I P+VV ++ ++  C+     EDA   L+ ++
Sbjct: 332 -----FGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 199/396 (50%), Gaps = 3/396 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +L      G   +A++  +   +R    ND     + +++ L + G+++ AK + E 
Sbjct: 218 YNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVT--YNVLVNGLSKKGELEQAKGLIEE 275

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            LN G   + Y ++ LI+ + + G   EA  +   M      P L TYN ++    K  V
Sbjct: 276 MLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKW-V 334

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
               V   F DML++   PD ++FNSLL    R G    A  LF+E+  R +   + TYN
Sbjct: 335 QVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYN 394

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+  +C    +D A  +  EM  + + P++ TY+ +++G  K G +  A   F+EM   
Sbjct: 395 TLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSK 454

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  DR +YNT +    K+     A  + +EM ++G   D +TYN  +    +QG ++E 
Sbjct: 455 GLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEA 514

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + E M +D + P+ +TY+++I+ + K G  ++A ++F E    G+   VV Y+ LI A
Sbjct: 515 CDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHA 574

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
                +++ A     +M ++ +  NV+TYN+II+  
Sbjct: 575 HAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGL 610



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 135/517 (26%), Positives = 236/517 (45%), Gaps = 44/517 (8%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           AKN++      G   TV  ++ ++ +Y + G   +A+ + + M+     PN VTYN +++
Sbjct: 199 AKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVN 258

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              K G + +    + ++ML +G+     T+N L+    + GL+  A +L  EMV+R   
Sbjct: 259 GLSKKG-ELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF 317

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
             + TYNTL+  +CK  Q+       ++M     +P++V++++++ GY + G + +A  +
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F E+K   +    ++YNT++      G  + AL + KEM   G+  D  TY  L+ G  K
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G     R  F +M +  + P+   Y+T I    K      A  +  E   AG   DV+ 
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVIT 497

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           Y+  + ALC+ G  E A  LL+ M  +G+ P+ VTY SII+ F ++             L
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNG-----------HL 546

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
            K +E  N         K V  +  T   +I                    +Q +     
Sbjct: 547 RKAREVFN-----EMLSKGVAPSVVTYTVLIHAHAA---------------KQMLDLAFM 586

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMG 688
            F KM +  +  NV+T++AI+N        ++A    +E+    +  N+    ++ +L+ 
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNK---FSYTILIN 643

Query: 689 YRDNI--WVQALSLFDEV---KLM-DSSTASAFYNAL 719
              N+  W +AL L+ E+   K+  DS T S F   L
Sbjct: 644 ESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 147/268 (54%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +FD M+RNG+ PD    N +L V     L   A+N++  M   GI   + TYNT+LD+ C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  ++D A E+++EM  +   PN VTY+ +++G +K G L+ A  +  EM   G+ +   
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +YN +++ + + G F EA  + +EM +        TYN L+ G  K  +   VR  F  M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
                +P+++++++L+  Y + G   EA  +F E K   L   V+ Y+ LI  LC  G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           ++A+ L  EMT +G+ P++ TY  +++ 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNG 434



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 188/402 (46%), Gaps = 4/402 (0%)

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CG 274
           F   L   +   + +F++L+  Y R+G   EA  +F+ +K  +L P ++TYN +I   C 
Sbjct: 343 FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCM 402

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
            G +D    + +  +M   G+ PD  T+  L+  C + G    AR  FNEM+ +G+  D 
Sbjct: 403 WGYLD--AALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
           F YNT +    K A   +AF +  EM A    P+V+TY+  +    + G  ++A ++   
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G+  D V+Y ++++ + K G   +A  V  EM S G+    VTY  L+  +  +  
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            D     F +M    V  N++TY+ +I+         EA + F E ++ G+  +   Y+ 
Sbjct: 581 LDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTI 640

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           LI+  C  G  E A+ L  EM    I+P+  T++  +    R       V  VE  +   
Sbjct: 641 LINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH-AVQCVESLIQNV 699

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
           +++ N+  +  + +   +   R+ + +++    L+   +  G
Sbjct: 700 EDNINVRLLRPRKNVMEENFARSQSPMLRSSAFLIGSSSELG 741



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 9/217 (4%)

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
           F +  +LD +     M  A+ +M  + +  +   V     +I G+         L +F +
Sbjct: 120 FVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVV---DVLIAGHVXC------LLVFDK 170

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G+  D  + N +L +        +A  V   ME  GI+   VTYN +L  Y K+G+
Sbjct: 171 MIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGR 230

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            D+   +  +M+     PN +TY+ L++  SK G  ++A  +  E   +GL      Y+ 
Sbjct: 231 VDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNP 290

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           LI+  C+ GL   A  L++EM      P + TYN+++
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLM 327



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 119/275 (43%), Gaps = 37/275 (13%)

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
            LLV  +M  +G+  D    N +L     +    + + ++  M+   + P ++TY+T++D
Sbjct: 164 CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLD 223

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            Y K G   +A+++  E ++ G   + V Y+ L++ L K G +E A  L++EM   G+  
Sbjct: 224 SYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNV 283

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII 602
           +  TYN +I+ F +        D VE       E  N  A  +    +    G    + +
Sbjct: 284 SAYTYNPLINGFCQKGLFVEAFDLVE-------EMVNRRAFPTLSTYNTLMYGLC--KWV 334

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
           +V G              R R         F  M K K  P++V+F+++L    R     
Sbjct: 335 QVTGV-------------RLR---------FSDMLKSKFTPDIVSFNSLLYGYCRTGCIS 372

Query: 663 DASMLLEELRLFD-----NQVYGVAHGLLM-GYRD 691
           +A +L +EL+  D          + HGL M GY D
Sbjct: 373 EAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLD 407


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 206/420 (49%), Gaps = 7/420 (1%)

Query: 145 ILKK-FEFKLCGADDYTFLLRELGN--RGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           I+KK FE ++   D +T+    LG+  + +   A+Q F    K     N      S +I+
Sbjct: 237 IMKKVFESEM-SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY--STLIN 293

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            L   G+V+ A ++    +  G   T +  +  I A    G  ++A  +F  MK    +P
Sbjct: 294 GLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEP 353

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           N+ TY A+I      G+  K  + +F  M R+GV P+ +T+N+L+ +       + A  +
Sbjct: 354 NVYTYTALISGLCVSGL-LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            N M   G   +I TYN ++   C       A  +M  M  +  S N+VTY+T+I GY  
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           +G    AL +   M+  G   D  SY  ++  + K+ + E A  +  EM   G+  + VT
Sbjct: 473 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y AL+ GY K  K D    + E MK     PN+ TY+ LI   +K   +  A ++ +   
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + G+  +VV Y+A+ID LCKNG    A+ + ++M ++G  PN++TY+S+I A G+    E
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 187/362 (51%), Gaps = 1/362 (0%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I  L  +G  + A  +F    N+G    VY ++ALIS    SG  + AI +F+ M R  +
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 386

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            PN VTYNA+I+   +     K+   + + M RNG  P+ +T+N ++      G  + A 
Sbjct: 387 FPNTVTYNALINILVENR-RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            + N M+ RG   ++ TYNT++   C       A  I+  M      P+  +Y+ +I G+
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K  +++ A  +F+EM   G+  + V+Y  ++  Y K  + + A  + + M+ SG R + 
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 565

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
            TYN L+ G  KQ  +     + + M  + + PN++TY+ +ID   K G    A+++F +
Sbjct: 566 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             + G   +++ YS+LI AL + G VE A +L  E+ + G+ P+ +TY  +I+A+  S  
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 685

Query: 560 TE 561
            E
Sbjct: 686 VE 687



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 149/555 (26%), Positives = 253/555 (45%), Gaps = 56/555 (10%)

Query: 127 EALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKRE 186
           ++ H   A AR  +S  D+L +   ++ G   Y+ LL  L   G         A  + R 
Sbjct: 153 KSCHSKEAMART-MSFLDMLSQSGLRM-GLFAYSALLIHLSRLGMT-------AAVMDRY 203

Query: 187 ERKNDQGK-----LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
            R   +G      + +A+I+ L + G V  A+ I +           + ++++I  + R 
Sbjct: 204 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 263

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD---DMLRNGVQPD 298
                A+ VFN M +   +PN VTY+ +I+    G  D   V E FD   +M+ +G+ P 
Sbjct: 264 HDLDSALQVFNQMAKEGCEPNTVTYSTLIN----GLCDSGRVNEAFDLIREMILHGILPT 319

Query: 299 RITFNS-LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
             T    ++A+C   G +E A  LF +M ++G + +++TY  L+  +C    + +A  + 
Sbjct: 320 AHTCTGPIIALCDM-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLF 378

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
             M    + PN VTY+ +I+   +  R+  A  + + M   G   + V+YN ++  Y  L
Sbjct: 379 HRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCIL 438

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G  ++A+LV   M   G   + VTYN ++ GY   G      R+ + M+     P+  +Y
Sbjct: 439 GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           + LI  + K    + A  +F E    GL  + V Y+ALID  CK+  +++A SLL+ M +
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 558

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
            G RPNV TYN +I                   L KQ   +  + +C    K + E G  
Sbjct: 559 SGCRPNVQTYNVLIHG-----------------LTKQNNFSGAEELC----KVMIEEG-- 595

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCI-LGVFQKMHKLKIKPNVVTFSAILNACS 656
                 +F  +V   A     +  C+     + L +F KM +    PN++T+S+++ A  
Sbjct: 596 ------IFPNVVTYTA---MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALG 646

Query: 657 RCNSFEDASMLLEEL 671
           +    E+A  L  EL
Sbjct: 647 QEGKVEEAENLFAEL 661



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 208/421 (49%), Gaps = 34/421 (8%)

Query: 287 FDDML-RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           F DML ++G++     +++LL   SR G+  A  + ++ M+  G+  ++  YN +++A+C
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K   +  A  IM ++    +SP+  TY++MI G+ +   LD AL +F++M   G   + V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y+T+++     GR  EA  + +EM   GI   A T    +      G Y++  R+F  M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           K     PN+ TY+ LI      GL K A+ +F    + G+  + V Y+ALI+ L +N  +
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD------VERDLGKQKESAN 579
           + A  +L+ M + G  PN+VTYN +I  +       C + D      V  ++ ++  SAN
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGY-------CILGDPKKAMLVMNNMLQRGHSAN 459

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC----------I 629
           L    +   K   ++G T +  +++   +   + G  K +     E++C           
Sbjct: 460 LVTY-NTIIKGYCDSGNTTSA-LRILDLM---RDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYGV-AHG 684
            G+F +M    + PN VT++A+++   +    + A+ LLE ++      + Q Y V  HG
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 685 L 685
           L
Sbjct: 575 L 575



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 213/440 (48%), Gaps = 12/440 (2%)

Query: 248 ISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL- 306
           +S  + + +  L+  L  Y+A++    + G+    V++ +  ML  GVQP+ + +N+++ 
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMT-AAVMDRYHRMLSEGVQPNLLIYNAVIN 223

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
           A+C  G + +A   +  ++    +  D FTY +++   C+   +D A ++  +M  +   
Sbjct: 224 ALCKDGNVADA-ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCE 282

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           PN VTYST+I+G   +GR+++A ++  EM   GI     +    +     +G +E+A  +
Sbjct: 283 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 342

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
             +M++ G   +  TY AL+ G    G       +F +M  D V PN +TY+ LI++  +
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVE 402

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
               K A  +     + G   ++V Y+ +I   C  G  + A+ +++ M + G   N+VT
Sbjct: 403 NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462

Query: 547 YNSIIDAFGRSA--TTECTVDDVERDLG-KQKESANLDAMCS-QDDKDVQEAGRTDNQII 602
           YN+II  +  S   T+   + D+ RD G K  E +  + +C       ++ A    N+++
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522

Query: 603 KVFGQLVAEKAGQGKKENRCRQEIL-CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
              G    E       +  C+ E L     + + M +   +PNV T++ +++  ++ N+F
Sbjct: 523 DD-GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 662 EDASMLLE---ELRLFDNQV 678
             A  L +   E  +F N V
Sbjct: 582 SGAEELCKVMIEEGIFPNVV 601



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 148/324 (45%), Gaps = 3/324 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+IL    ++  A  +       G    +  ++ +I  Y   G  ++A+ V N+M +
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
                NLVTYN +I   C  G       + I D M   G +PD  ++  L+    +    
Sbjct: 454 RGHSANLVTYNTIIKGYCDSGNT--TSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E+A  LFNEMV  G+  +  TY  L+D  CK  ++D A  ++  M      PNV TY+ +
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G  K      A  +   M   GI  + V+Y  ++    K G    AL +  +M   G 
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + +TY++L+   G++GK +E   +F +++   + P+ +TY  +I+ Y   G  + A  
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691

Query: 496 IFREFKQAGLKADVVLYSALIDAL 519
                 +AG +  +  Y  LI  L
Sbjct: 692 FLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 146/365 (40%), Gaps = 25/365 (6%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K+D A ++ E     G    V  ++ LI    +      A  +   M    + PN+VTY 
Sbjct: 545 KLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYT 604

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           A+ID   K G      +E+F+ M+  G  P+ +T++SL+    + G  E A NLF E+  
Sbjct: 605 AMIDGLCKNG-STSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 663

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL-- 385
            G+  D  TY  +++A     +++ AF  +  M      P + TY  +I G      L  
Sbjct: 664 HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723

Query: 386 ---------------------DDALNMFS-EMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
                                 DA+++ S ++  L  GL     N ++S  +  GR+ EA
Sbjct: 724 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 783

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
             +   M S G+  D   YN+LL    +    D    +F+ M       +L  Y  LI  
Sbjct: 784 NELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICA 843

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             +    KEA   F          D V+ + LID L ++G  +  +  L  M      P+
Sbjct: 844 LCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903

Query: 544 VVTYN 548
              Y 
Sbjct: 904 FHIYT 908


>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Glycine max]
          Length = 667

 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 235/492 (47%), Gaps = 40/492 (8%)

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           LA  +F+    +G     Y +S LI+ +G+ G    ++     M++ N+  +LV Y+ +I
Sbjct: 162 LAHGLFDEMRQKGLSPDRYTYSTLITCFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLI 221

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           D   K   D+   + IF  +  + + PD I +NS++ V  +  L+  AR L  EM    +
Sbjct: 222 DLARKLS-DYSKAISIFSRLKASTITPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAV 280

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             D  +Y+TLL       +   A  + +EM       ++ T + MID Y +     +A  
Sbjct: 281 QPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADR 340

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +F  M+ +GI  + +SYNT+L +Y +   F EA+ + + M+S  ++++ VTYN ++  YG
Sbjct: 341 LFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYG 400

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K  ++++   + ++M    + PN +TYST+I ++ K G    A  +F++ + +G++ D V
Sbjct: 401 KTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEV 460

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
           LY  +I A  + GLV  A  LL E+     RP+ +  ++ I    R+   E         
Sbjct: 461 LYQTMIVAYERTGLVAHAKRLLHELK----RPDNIPRDTAIAILARAGRIE--------- 507

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
                  A      + D ++V++        I VFG ++   +   K  N        ++
Sbjct: 508 ------EATWVFRQAFDAREVKD--------ISVFGCMINLFSKNKKYAN--------VV 545

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLL 686
            VF+KM ++   P+    + +LNA  +   F+ A  L  ++     +F ++V+     L 
Sbjct: 546 EVFEKMREVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSLY 605

Query: 687 MGYRDNIWVQAL 698
              +D + V++L
Sbjct: 606 GARKDFVMVESL 617



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 203/433 (46%), Gaps = 42/433 (9%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LLR +    +W  A   F     R++  +      S +I+  G+ G  D +    + 
Sbjct: 147 YNVLLRNVLRAKQWHLAHGLFD--EMRQKGLSPDRYTYSTLITCFGKHGLFDSSLFWLQQ 204

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +     +  +S LI    +     +AIS+F+ +K   + P+L+ YN++I+  GK  +
Sbjct: 205 MEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFGKAKL 264

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM------------- 325
            F+    +  +M  N VQPD +++++LLA+      +  A +LF+EM             
Sbjct: 265 -FREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLTTCN 323

Query: 326 --------VH--------------RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
                   +H               GI  ++ +YNTLL    +      A  +   M +K
Sbjct: 324 IMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQSK 383

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
           ++  NVVTY+TMI+ Y K    + A N+  EM   GI  + ++Y+T++SI+ K G+ + A
Sbjct: 384 DVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRA 443

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
            ++ +++ SSG+R D V Y  ++  Y + G     +R+  ++K     P+ +   T I +
Sbjct: 444 AILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELK----RPDNIPRDTAIAI 499

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            ++ G  +EA  +FR+   A    D+ ++  +I+   KN    + V + ++M + G  P+
Sbjct: 500 LARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFPD 559

Query: 544 VVTYNSIIDAFGR 556
                 +++AFG+
Sbjct: 560 SDVIALVLNAFGK 572



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 187/381 (49%), Gaps = 31/381 (8%)

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +P    +N LL    R   W  A  LF+EM  +G+  D +TY+TL+    K    D +  
Sbjct: 141 RPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCFGKHGLFDSSLF 200

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
            + +M   N+S ++V YS +ID   K      A+++FS +K   I  D ++YN++++++ 
Sbjct: 201 WLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFG 260

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K   F EA L+ +EM  + ++ D V+Y+ LL  Y    K+ E   +F +M       +L 
Sbjct: 261 KAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLT 320

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           T + +IDVY +  + KEA ++F   ++ G++ +V+ Y+ L+    +  L   A+ L   M
Sbjct: 321 TCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLM 380

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
             + ++ NVVTYN++I+ +G++   E              ++ NL  +   + + ++   
Sbjct: 381 QSKDVQQNVVTYNTMINIYGKTLEHE--------------KATNL--IQEMNKRGIEPNA 424

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
            T + II ++     EKAG+       R  IL     FQK+    ++ + V +  ++ A 
Sbjct: 425 ITYSTIISIW-----EKAGKLD-----RAAIL-----FQKLRSSGVRIDEVLYQTMIVAY 469

Query: 656 SRCNSFEDASMLLEELRLFDN 676
            R      A  LL EL+  DN
Sbjct: 470 ERTGLVAHAKRLLHELKRPDN 490



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 179/352 (50%), Gaps = 6/352 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI++ G+      A+ + +   +        ++S L++ Y  +    EA+S+F+ M  
Sbjct: 253 NSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNE 312

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                +L T N +ID  G+  +  K    +F  M + G+QP+ I++N+LL V     L+ 
Sbjct: 313 AKCPLDLTTCNIMIDVYGQLHMP-KEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFG 371

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +LF  M  + + Q++ TYNT+++   K  + + A  ++ EM  + I PN +TYST+I
Sbjct: 372 EAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTII 431

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             + KAG+LD A  +F +++  G+ +D V Y T++  Y + G    A  +  E++    R
Sbjct: 432 SIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELK----R 487

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +  +  +    + G+ +E   +F Q        ++  +  +I+++SK   Y   +++
Sbjct: 488 PDNIPRDTAIAILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYANVVEV 547

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG-IRPNVVTY 547
           F + ++ G   D  + + +++A  K    + A +L  +M +EG + P+ V +
Sbjct: 548 FEKMREVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHF 599



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 145/284 (51%), Gaps = 8/284 (2%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI + G+L     A  +F +    G    V +++ L+  YG +    EAI +F  M+  +
Sbjct: 325 MIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQSKD 384

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           ++ N+VTYN +I+  GK  ++ +    +  +M + G++P+ IT+++++++  + G  + A
Sbjct: 385 VQQNVVTYNTMINIYGK-TLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRA 443

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             LF ++   G+  D   Y T++ A  +   +  A  ++ E+      P+ +   T I  
Sbjct: 444 AILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELK----RPDNIPRDTAIAI 499

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVS-YNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            A+AGR+++A  +F +  F    +  +S +  ++++++K  ++   + V ++M   G   
Sbjct: 500 LARAGRIEEATWVFRQ-AFDAREVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFP 558

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKAD-CVSPNLLTYSTL 480
           D+     +L  +GK  ++D+   ++ QM  + CV P+ + +  L
Sbjct: 559 DSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQML 602


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 206/420 (49%), Gaps = 7/420 (1%)

Query: 145 ILKK-FEFKLCGADDYTFLLRELGN--RGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           I+KK FE ++   D +T+    LG+  + +   A+Q F    K     N      S +I+
Sbjct: 237 IMKKVFESEM-SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY--STLIN 293

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            L   G+V+ A ++    +  G   T +  +  I A    G  ++A  +F  MK    +P
Sbjct: 294 GLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEP 353

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           N+ TY A+I      G+  K  + +F  M R+GV P+ +T+N+L+ +       + A  +
Sbjct: 354 NVYTYTALISGLCVSGL-LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            N M   G   +I TYN ++   C       A  +M  M  +  S N+VTY+T+I GY  
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           +G    AL +   M+  G   D  SY  ++  + K+ + E A  +  EM   G+  + VT
Sbjct: 473 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y AL+ GY K  K D    + E MK     PN+ TY+ LI   +K   +  A ++ +   
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + G+  +VV Y+A+ID LCKNG    A+ + ++M ++G  PN++TY+S+I A G+    E
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 187/362 (51%), Gaps = 1/362 (0%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I  L  +G  + A  +F    N+G    VY ++ALIS    SG  + AI +F+ M R  +
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 386

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            PN VTYNA+I+   +     K+   + + M RNG  P+ +T+N ++      G  + A 
Sbjct: 387 FPNTVTYNALINILVENR-RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            + N M+ RG   ++ TYNT++   C       A  I+  M      P+  +Y+ +I G+
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K  +++ A  +F+EM   G+  + V+Y  ++  Y K  + + A  + + M+ SG R + 
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 565

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
            TYN L+ G  KQ  +     + + M  + + PN++TY+ +ID   K G    A+++F +
Sbjct: 566 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             + G   +++ YS+LI AL + G VE A +L  E+ + G+ P+ +TY  +I+A+  S  
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 685

Query: 560 TE 561
            E
Sbjct: 686 VE 687



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 253/550 (46%), Gaps = 46/550 (8%)

Query: 127 EALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKRE 186
           ++ H   A AR  +S  D+L +   ++ G   Y+ LL  L   G  +  +  +   +   
Sbjct: 153 KSCHSKEAMART-MSFLDMLSQSGLRM-GLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 187 ERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQE 246
            + N    + +A+I+ L + G V  A+ I +           + ++++I  + R      
Sbjct: 211 VQPNLL--IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDS 268

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD---DMLRNGVQPDRITFN 303
           A+ VFN M +   +PN VTY+ +I+    G  D   V E FD   +M+ +G+ P   T  
Sbjct: 269 ALQVFNQMAKEGCEPNTVTYSTLIN----GLCDSGRVNEAFDLIREMILHGILPTAHTCT 324

Query: 304 S-LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
             ++A+C   G +E A  LF +M ++G + +++TY  L+  +C    + +A  +   M  
Sbjct: 325 GPIIALCDM-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR 383

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
             + PN VTY+ +I+   +  R+  A  + + M   G   + V+YN ++  Y  LG  ++
Sbjct: 384 DGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A+LV   M   G   + VTYN ++ GY   G      R+ + M+     P+  +Y+ LI 
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            + K    + A  +F E    GL  + V Y+ALID  CK+  +++A SLL+ M + G RP
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 563

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII 602
           NV TYN +I                   L KQ   +  + +C    K + E G       
Sbjct: 564 NVQTYNVLIHG-----------------LTKQNNFSGAEELC----KVMIEEG------- 595

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCI-LGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
            +F  +V   A     +  C+     + L +F KM +    PN++T+S+++ A  +    
Sbjct: 596 -IFPNVVTYTA---MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651

Query: 662 EDASMLLEEL 671
           E+A  L  EL
Sbjct: 652 EEAENLFAEL 661



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 201/403 (49%), Gaps = 29/403 (7%)

Query: 287 FDDML-RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           F DML ++G++     +++LL   SR G+  A  + ++ M+  G+  ++  YN +++A+C
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K   +  A  IM ++    +SP+  TY++MI G+ +   LD AL +F++M   G   + V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y+T+++     GR  EA  + +EM   GI   A T    +      G Y++  R+F  M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           K     PN+ TY+ LI      GL K A+ +F    + G+  + V Y+ALI+ L +N  +
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD------VERDLGKQKESAN 579
           + A  +L+ M + G  PN+VTYN +I  +       C + D      V  ++ ++  SAN
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGY-------CILGDPKKAMLVMNNMLQRGHSAN 459

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC----------I 629
           L    +   K   ++G T +  +++   +   + G  K +     E++C           
Sbjct: 460 L-VTYNTIIKGYCDSGNTTSA-LRILDLM---RDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            G+F +M    + PN VT++A+++   +    + A+ LLE ++
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 213/440 (48%), Gaps = 12/440 (2%)

Query: 248 ISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL- 306
           +S  + + +  L+  L  Y+A++    + G+    V++ +  ML  GVQP+ + +N+++ 
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMT-AAVMDRYHRMLSEGVQPNLLIYNAVIN 223

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
           A+C  G + +A   +  ++    +  D FTY +++   C+   +D A ++  +M  +   
Sbjct: 224 ALCKDGNVADA-ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCE 282

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           PN VTYST+I+G   +GR+++A ++  EM   GI     +    +     +G +E+A  +
Sbjct: 283 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 342

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
             +M++ G   +  TY AL+ G    G       +F +M  D V PN +TY+ LI++  +
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVE 402

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
               K A  +     + G   ++V Y+ +I   C  G  + A+ +++ M + G   N+VT
Sbjct: 403 NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462

Query: 547 YNSIIDAFGRSA--TTECTVDDVERDLG-KQKESANLDAMCS-QDDKDVQEAGRTDNQII 602
           YN+II  +  S   T+   + D+ RD G K  E +  + +C       ++ A    N+++
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522

Query: 603 KVFGQLVAEKAGQGKKENRCRQEIL-CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
              G    E       +  C+ E L     + + M +   +PNV T++ +++  ++ N+F
Sbjct: 523 DD-GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 662 EDASMLLE---ELRLFDNQV 678
             A  L +   E  +F N V
Sbjct: 582 SGAEELCKVMIEEGIFPNVV 601



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 148/324 (45%), Gaps = 3/324 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+IL    ++  A  +       G    +  ++ +I  Y   G  ++A+ V N+M +
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
                NLVTYN +I   C  G       + I D M   G +PD  ++  L+    +    
Sbjct: 454 RGHSANLVTYNTIIKGYCDSGNT--TSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E+A  LFNEMV  G+  +  TY  L+D  CK  ++D A  ++  M      PNV TY+ +
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G  K      A  +   M   GI  + V+Y  ++    K G    AL +  +M   G 
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + +TY++L+   G++GK +E   +F +++   + P+ +TY  +I+ Y   G  + A  
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691

Query: 496 IFREFKQAGLKADVVLYSALIDAL 519
                 +AG +  +  Y  LI  L
Sbjct: 692 FLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 146/364 (40%), Gaps = 25/364 (6%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K+D A ++ E     G    V  ++ LI    +      A  +   M    + PN+VTY 
Sbjct: 545 KLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYT 604

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           A+ID   K G      +E+F+ M+  G  P+ +T++SL+    + G  E A NLF E+  
Sbjct: 605 AMIDGLCKNG-STSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 663

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL-- 385
            G+  D  TY  +++A     +++ AF  +  M      P + TY  +I G      L  
Sbjct: 664 HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723

Query: 386 ---------------------DDALNMFS-EMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
                                 DA+++ S ++  L  GL     N ++S  +  GR+ EA
Sbjct: 724 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 783

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
             +   M S G+  D   YN+LL    +    D    +F+ M       +L  Y  LI  
Sbjct: 784 NELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICA 843

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             +    KEA   F          D V+ + LID L ++G  +  +  L  M      P+
Sbjct: 844 LCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903

Query: 544 VVTY 547
              Y
Sbjct: 904 FHIY 907


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 191/353 (54%), Gaps = 12/353 (3%)

Query: 203 LGRLGKVDLAKNIFET--ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN-SMKRYNL 259
           L R+GK++ A+ I       N    NT      LI+ Y  SG  +EA S  N +M  +  
Sbjct: 333 LCRIGKLNEARKILIKIPCPNNAILNT------LINGYVMSGQLKEAQSFLNETMINFGF 386

Query: 260 KPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           +P++ TYN ++   C +G + F    ++ ++M R G +P+ IT+  L+    + GL E A
Sbjct: 387 QPDIFTYNILMHGLCKEGSLSFAR--DLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             + +EM  RG+  +   YN L+ A+C+  ++ +A  +++EM  K   P++ TY+++I G
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYG 504

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K  R+D+A  +F  M   G   + V+YNT++    + G F++AL +  +M   G   D
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            +TYN L+  + K G  ++   ++EQM  D +  + ++ + +I+   K G    A +  R
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +    G   D+V Y+++++ LCK G ++ A++L D +  EG+RP+  TYN+ I
Sbjct: 625 DAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 169/345 (48%), Gaps = 1/345 (0%)

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           ET +N G+   ++ ++ L+    + G    A  + N M R   +PN++TY  +++   K 
Sbjct: 379 ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKA 438

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G+  +    +  +M   G+  + + +N L+    R      A NL +EM  +G   D+FT
Sbjct: 439 GL-LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFT 497

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN+L+  +CK  ++D AF +   M       N VTY+T+I    + G    AL + ++M 
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
           F G  LD+++YN ++  + K+G  E+ L + ++M   G+  D ++ N ++ G  K GK D
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
                          P+++TY+++++   K G  KEA+ +F   +  G++ D   Y+  I
Sbjct: 618 NAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
              CK G+V  A        + G  P+ +T+N ++    + +  E
Sbjct: 678 SWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQE 722



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 184/417 (44%), Gaps = 66/417 (15%)

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           +A N+F   L++G   TV+ F  ++ A         A S+   M ++   PN + Y  +I
Sbjct: 201 VATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLI 260

Query: 271 DA---------------------CGKGGVDFKHVV-------------EIFDDMLRNGVQ 296
            A                     C      F  V+             ++ D ML  G  
Sbjct: 261 HALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFY 320

Query: 297 PDRITFNSLL-AVCSRGGLWEA------------------------------ARNLFNE- 324
           PD +T+  LL  +C  G L EA                              A++  NE 
Sbjct: 321 PDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNET 380

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M++ G   DIFTYN L+  +CK   +  A +++ EM  +   PNV+TY+ +++G  KAG 
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           L++A  +  EM   G+ ++ V YN ++    +  +   AL +  EM + G + D  TYN+
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G  K  + DE  R+F  M  D    N +TY+TLI    + G +++A+ +  +    G
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
              D + Y+ LI A CK G +E  + L ++M  +G+  + ++ N +I+   +    +
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 179/405 (44%), Gaps = 41/405 (10%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR- 256
             I+ LG +GK  L   +      EG       F  ++  YG++G   +AI +   M+  
Sbjct: 117 VFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAV 176

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           Y  +P   +Y+ V++    G    +    +F DML  GV P   TF  ++         +
Sbjct: 177 YLCEPTFKSYDLVLEILVTGNCP-QVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVD 235

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +A +L  +M   G   +   Y TL+ A+ +  Q+  A +++ EM      P+V T++ +I
Sbjct: 236 SACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVI 295

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSY----------------------------- 407
            G  K  ++ DA  +   M   G   D ++Y                             
Sbjct: 296 HGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNA 355

Query: 408 --NTVLSIYAKLGRFEEALLVCKE-MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
             NT+++ Y   G+ +EA     E M + G + D  TYN L+ G  K+G     R +  +
Sbjct: 356 ILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 415

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M      PN++TY+ L++   K GL +EA  +  E    GL  + V+Y+ LI ALC+   
Sbjct: 416 MSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEK 475

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           V  A++LL EM  +G +P++ TYNS+I          C VD ++ 
Sbjct: 476 VHVALNLLSEMCTKGCKPDLFTYNSLIYGL-------CKVDRIDE 513



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 121/521 (23%), Positives = 228/521 (43%), Gaps = 47/521 (9%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           +GY +T   +   I+  G  G  +    +   MK   +      +  ++   GK G   +
Sbjct: 106 KGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQ 165

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            +  + D       +P   +++ +L +   G   + A N+F +M+ +G+   +FT+  ++
Sbjct: 166 AIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVM 225

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
            A+C   ++D A  ++ +M      PN + Y T+I   ++  ++ +AL +  EM  +G  
Sbjct: 226 KALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCM 285

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D  ++N V+    K+ +  +A  +   M   G   D +TY  LL G  + GK +E R++
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI 345

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE-FKQAGLKADVVLYSALIDALC 520
              +K  C  PN    +TLI+ Y   G  KEA     E     G + D+  Y+ L+  LC
Sbjct: 346 L--IKIPC--PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLC 401

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           K G +  A  L++EM++ G  PNV+TY  +++   ++   E      E  L   + SA  
Sbjct: 402 KEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLE------EAGLVLHEMSAR- 454

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI-LGVFQKMHKL 639
                         G T N +I  +  L+            CR+E + + L +  +M   
Sbjct: 455 --------------GLTINSVI--YNCLICA---------LCRKEKVHVALNLLSEMCTK 489

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRL----FDNQVYG-VAHGLLMGYRDNIW 694
             KP++ T+++++    + +  ++A  L   + L     +N  Y  + H LL   R   +
Sbjct: 490 GCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALL---RRGAF 546

Query: 695 VQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ-KRGAQL 734
            +AL+L +++     +     YN L       G  ++G +L
Sbjct: 547 QKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLEL 587



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 122/260 (46%), Gaps = 21/260 (8%)

Query: 153 LCGA---DDYTFLLRELGNRGEWSKAI--QCFAFAVKREERKNDQGKLASAM-------- 199
           LC A   ++   +L E+  RG    ++   C   A+ R+E+ +    L S M        
Sbjct: 435 LCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPD 494

Query: 200 -------ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
                  I  L ++ ++D A  +F   L +G       ++ LI A  R G  Q+A+++ N
Sbjct: 495 LFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVN 554

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            M       + +TYN +I A  K G + +  +E+++ M+ +G+  D I+ N ++    + 
Sbjct: 555 DMLFRGCTLDKITYNGLIKAFCKVG-NIEKGLELYEQMIMDGLGADTISCNIMINGLCKV 613

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  + A     + ++RG   DI TYN++L+ +CK  ++  A  +   +  + + P+  TY
Sbjct: 614 GKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTY 673

Query: 373 STMIDGYAKAGRLDDALNMF 392
           +T I    K G ++DA   F
Sbjct: 674 NTFISWQCKEGMVNDACLFF 693



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 3/112 (2%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + MI+ L ++GKVD A      A+N G+   +  ++++++   + G  +EA+++F+ ++
Sbjct: 603 CNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQ 662

Query: 256 RYNLKPNLVTYNAVID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL 306
              ++P+  TYN  I   C +G V+       F   + NG  P  +T+N L+
Sbjct: 663 VEGVRPDAFTYNTFISWQCKEGMVN--DACLFFYRGIENGFVPSNLTWNVLV 712


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 184/366 (50%), Gaps = 8/366 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A++  L + G++D A  I E  + +G   T+  ++ +I    ++G  +EA  +F  M  
Sbjct: 115 TALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLG 174

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG----VQPDRITFNSLL-AVCSR 311
              +P+   Y A+I    K G      +   + M+ NG    V+PD +  N ++  +C+ 
Sbjct: 175 NGCRPDAFVYTALISGLAKIG-KLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCAS 233

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
           G L E A   F+E+    +D   FT+N L+ A+CK  + + A   + +M  +   P + T
Sbjct: 234 GNL-EDALAYFDEL-DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFT 291

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y++++DG+ K GRLD+AL    E    G   D V+Y +++    KLGR EE      EM 
Sbjct: 292 YTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 351

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           + G   DAVTY AL+ G+ K     +  R++ QM       + +TY+ ++D   K G   
Sbjct: 352 NRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVA 411

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA   F   ++ G  A VV YSAL+D  C  G V +AV L   M   G  PN+V+YN II
Sbjct: 412 EAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIII 471

Query: 552 DAFGRS 557
               R+
Sbjct: 472 RGLCRA 477



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 176/376 (46%), Gaps = 11/376 (2%)

Query: 187 ERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQE 246
           +RK    ++ +A+++ L + G++D A  + +          + AF+ +I+   R     E
Sbjct: 3   DRKLVDTRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDE 59

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A SV     R   +P+ VTYN  ID  C    VD     ++   M      P  +T+ +L
Sbjct: 60  AFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVD--DAFQLLKKMDEKKCLPTTVTYTAL 117

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    + G  + A  +  +MV +G    + TY  ++D + K  +++ A  I  +M     
Sbjct: 118 VDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGC 177

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMK----FLGIGLDRVSYNTVLSIYAKLGRFE 421
            P+   Y+ +I G AK G+LD+AL   ++M       G+  D V +N V+      G  E
Sbjct: 178 RPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLE 237

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           +AL    E++ S +     T+N L+    K  + +E     ++M      P L TY++L+
Sbjct: 238 DALAYFDELDDS-LDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLV 296

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           D + K G   EA+   +E  + G   D V Y+++ID LCK G VE       EM   G  
Sbjct: 297 DGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYE 356

Query: 542 PNVVTYNSIIDAFGRS 557
           P+ VTY ++ID F ++
Sbjct: 357 PDAVTYAALIDGFMKA 372



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 164/338 (48%), Gaps = 7/338 (2%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           T++ +++L+  + + G   EA+            P+ VTY ++ID   K G   +   E 
Sbjct: 288 TLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLG-RVEEGCER 346

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F +M   G +PD +T+ +L+    +  +   A  ++ +M+  G      TYN +LD +CK
Sbjct: 347 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 406

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A+     M  +     VVTYS ++DG+   G +  A+ +F  M   G   + VS
Sbjct: 407 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 466

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV---RRMFE 463
           YN ++    + G+  +A    +++    +  D  T+N+ L G  +  + D V     +FE
Sbjct: 467 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQ--RLDTVGDGVELFE 524

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
            M +   SPNL +YS L+D   + G  +  ++IF E    G+  DVV+++ LI  LC  G
Sbjct: 525 SMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAG 584

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            V+ A+ +  E+ +    P+  +Y S++DA  R    E
Sbjct: 585 RVDEALEVFRELERRSA-PDAWSYWSLLDALSRCERME 621



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 207/466 (44%), Gaps = 48/466 (10%)

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D      LL+ +CK  Q+D A  ++ EMP    SP++V ++ +I+G  +  RLD+A ++ 
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMPC---SPDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
                 G   D V+YN  +    K  R ++A  + K+M+        VTY AL+ G  K 
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G+ DE   + EQM     SP L TY+ +ID  SK G  +EA +IF +    G + D  +Y
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVY 184

Query: 513 SALIDALCKNGLVESAVSLLDEMTK----EGIRPNVVTYNSIIDAFGRSATTE---CTVD 565
           +ALI  L K G ++ A+  L++M +     G+ P+VV +N +I     S   E      D
Sbjct: 185 TALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFD 244

Query: 566 DVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
           +++  L     + N  + A+C        +A RT+  I  V          +   E RC 
Sbjct: 245 ELDDSLDLTHFTFNPLVAALC--------KAERTEEAIAFV----------KKMSERRCF 286

Query: 624 QEILC---ILGVFQKMHK-----LKIK--------PNVVTFSAILNACSRCNSFEDASML 667
             +     ++  F K+ +     L++K        P+ VT+++I++   +    E+    
Sbjct: 287 PTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 346

Query: 668 LEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWH 725
             E+R    +   V +  L+ G+ +  +  +A  ++ ++    +  ++  YN + D L  
Sbjct: 347 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 406

Query: 726 FGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAW 771
            G+   A    L  + R     V + S L     S G   A V  +
Sbjct: 407 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELF 452



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 3/233 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G+V  A   F      G   TV  +SAL+  +   G    A+ +F  M     +PN
Sbjct: 404 LCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN 463

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
           LV+YN +I    + G         F+ +L+  + PD  TFNS L  +C R         L
Sbjct: 464 LVSYNIIIRGLCRAG-KLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVEL 522

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F  MV +G   ++ +Y+ L+D IC+   +++  EI  EM ++ ++P+VV ++T+I     
Sbjct: 523 FESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCI 582

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           AGR+D+AL +F E++      D  SY ++L   ++  R EEA L+   M+  G
Sbjct: 583 AGRVDEALEVFRELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKLQG 634


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 193/397 (48%), Gaps = 6/397 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT +L+ L     W    + FA  +++    N+       ++    R G V+ A  + E 
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVT--FDMLVRFFCRGGMVERAIQVLEQ 310

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G        + +I+   + G   +A    N+M  Y   P+ ++Y  V+    +   
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAE- 369

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            ++   E+  +M+R    P+ +TFN+ + +  + GL E A  L  +M   G + +I TYN
Sbjct: 370 RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYN 429

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L++  C   ++D A E+   MP K   PN +TY+T++ G   A RLD A  + +EM   
Sbjct: 430 ALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQK 486

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
               + V++N ++S + + G  +EA+ + ++M   G   + +TYN LL G       +E 
Sbjct: 487 DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEA 546

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +   + ++ VSP+++TYS++I V S+    +EA+++F   +  G++   V+Y+ ++ A
Sbjct: 547 LELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLA 606

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           LCK    + A+     M   G  PN +TY ++I+   
Sbjct: 607 LCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLA 643



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 198/394 (50%), Gaps = 10/394 (2%)

Query: 163 LRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE 222
           LR L  R + ++A +    A  R E  +    L + +I  L R G+   A  +   A   
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVY--LCTKLIRNLCRRGRTSDAARVLRAAERS 107

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           G    V+A++ L++ Y R G    A  +  SM    + P+  TY  +I   C +G V   
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVG-- 162

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
             + + DDML  G QP  +T+  LL AVC   G  +A   + +EM  +G   +I TYN +
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAME-VLDEMRAKGCTPNIVTYNVI 221

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           ++ +C+  ++D A E +  + +    P+ V+Y+T++ G   A R +D   +F+EM     
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             + V+++ ++  + + G  E A+ V ++M   G   +    N ++    KQG+ D+  +
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQ 341

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
               M +   SP+ ++Y+T++    +   +++A ++ +E  +     + V ++  I  LC
Sbjct: 342 FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 401

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + GL+E A  L+++M++ G   N+VTYN++++ F
Sbjct: 402 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 235/518 (45%), Gaps = 31/518 (5%)

Query: 160 TFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILG--RLGKVDLAKNIFE 217
           T L+R L  RG  S A    A  ++  ER      + +    + G  R G++D A+ +  
Sbjct: 82  TKLIRNLCRRGRTSDA----ARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIA 137

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
           +          Y ++ +I      G   EA+S+ + M     +P++VTY  +++A  K  
Sbjct: 138 SM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKS- 193

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             F   +E+ D+M   G  P+ +T+N ++    R G  + AR   N +   G   D  +Y
Sbjct: 194 TGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSY 253

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            T+L  +C   + +   E+ AEM  KN  PN VT+  ++  + + G ++ A+ +  +M  
Sbjct: 254 TTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSG 313

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   +    N V++   K GR ++A      M S G   D ++Y  +L G  +  ++++
Sbjct: 314 HGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 373

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            + + ++M      PN +T++T I +  + GL ++A  +  +  + G + ++V Y+AL++
Sbjct: 374 AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVN 433

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS----ATTECTVDDVERDLGK 573
             C  G V+SA+ L   M     +PN +TY +++     +    A  E   + +++D   
Sbjct: 434 GFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAP 490

Query: 574 QKESAN--LDAMCSQDDKDVQEAGRTDNQIIK--VFGQLVAEKAGQGKKENRCRQEILCI 629
              + N  +   C +   D  EA     Q+++      L+          N C  E    
Sbjct: 491 NVVTFNVLVSFFCQKGLMD--EAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSE---- 544

Query: 630 LGVFQKMHKL---KIKPNVVTFSAILNACSRCNSFEDA 664
               + +H L    + P++VT+S+I+   SR +  E+A
Sbjct: 545 -EALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEA 581



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 164/336 (48%), Gaps = 6/336 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           F  L+  + R G  + AI V   M  +    N    N VI+  C +G VD     +  ++
Sbjct: 288 FDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD--DAFQFLNN 345

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G  PD I++ ++L    R   WE A+ L  EMV +    +  T+NT +  +C+   
Sbjct: 346 MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 405

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++ A  ++ +M       N+VTY+ +++G+   GR+D AL +F  M       + ++Y T
Sbjct: 406 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTT 462

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +L+      R + A  +  EM       + VT+N L+  + ++G  DE   + EQM    
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            +PNL+TY+TL+D  +     +EA+++       G+  D+V YS++I  L +   VE A+
Sbjct: 523 CTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
            +   +   G+RP  V YN I+ A  +   T+  +D
Sbjct: 583 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAID 618



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 149/304 (49%), Gaps = 6/304 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R  + + AK + +  + +        F+  I    + G  ++A  +   M  +  + N
Sbjct: 365 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVN 424

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +VTYNA+++  C +G VD    +E+F  M     +P+ IT+ +LL         +AA  L
Sbjct: 425 IVTYNALVNGFCVQGRVD--SALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAEL 479

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             EM+ +    ++ T+N L+   C+   MD A E++ +M     +PN++TY+T++DG   
Sbjct: 480 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITN 539

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
               ++AL +   +   G+  D V+Y++++ + ++  R EEA+ +   ++  G+R  AV 
Sbjct: 540 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVI 599

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN +L    K+   D     F  M ++   PN LTY TLI+  +     KE   + RE  
Sbjct: 600 YNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELC 659

Query: 502 QAGL 505
             G+
Sbjct: 660 SRGV 663


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 188/343 (54%), Gaps = 14/343 (4%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
            V+ F+ +I+A  ++G   +A  V   MK Y   PN+V+YN +ID  C  GG    +  +
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKAD 281

Query: 286 -IFDDMLRNGVQPDRITFNSLLAVCSRGGLWE-----AARNLFNEMVHRGIDQDIFTYNT 339
            +  +M+ N V P+  TFN L+      G W+      +  +F EM+ + +  ++ TYN+
Sbjct: 282 AVLKEMVENEVSPNLTTFNILI-----DGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNS 336

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L++ +C G +++ A  +  +M +  + PN++TY ++I+G+ K G + +AL+MF  +K  G
Sbjct: 337 LINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQG 396

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
                  YN ++  Y KLG+ ++   + +EME  GI  D  TYN L+ G  + G  +  +
Sbjct: 397 TRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++F+Q+    + P+L+T+  L++ Y   G  ++A  + +E  + GLK   + Y+ ++   
Sbjct: 457 KLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGY 515

Query: 520 CKNGLVESAVSLLDEMTKE-GIRPNVVTYNSIIDAFGRSATTE 561
           CK G +++A ++  +M KE  +R NV +YN ++  + +    E
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLE 558



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 223/444 (50%), Gaps = 48/444 (10%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           F     A+ RSGY    +S  +       KP +V   A++       V++     ++ +M
Sbjct: 169 FELGFEAFKRSGYYGYKLSAMSC------KPLMV---ALLKQNRSADVEY-----LYKEM 214

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK---G 347
           +R  +QP+  TFN ++    + G    AR++  +M   G   ++ +YNTL+D  CK    
Sbjct: 215 IRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGN 274

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +M  A  ++ EM    +SPN+ T++ +IDG+ K   L  +L +F EM    +  + ++Y
Sbjct: 275 GKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITY 334

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N++++     G+  EA+ +  +M S+G++ + +TY++L+ G+ K G   E   MF+ +K 
Sbjct: 335 NSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKG 394

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
               P    Y+ LID Y K G   +   +  E ++ G+  DV  Y+ LI  LC+NG +E+
Sbjct: 395 QGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
           A  L D++T +G+ P++VT++ +++ +       C+        G+ +++A L    S+ 
Sbjct: 455 AKKLFDQLTNKGL-PDLVTFHILMEGY-------CS-------RGESRKAAMLLKEMSK- 498

Query: 588 DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
              ++    T N ++K +      K G  K     R ++       +K  +L++  NV +
Sbjct: 499 -MGLKPRHLTYNIMMKGYC-----KEGNLKAATNMRTQM-------EKERRLRM--NVAS 543

Query: 648 FSAILNACSRCNSFEDASMLLEEL 671
           ++ +L   S+    EDA+MLL E+
Sbjct: 544 YNVLLQGYSQKGKLEDANMLLNEM 567



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 140/248 (56%), Gaps = 5/248 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I+ L   GK++ A  + +  ++ G    +  + +LI+ + ++G  +EA+ +F+S+K 
Sbjct: 335 NSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKG 394

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              +P    YN +IDA C  G +D    ++  ++M R G+ PD  T+N L+A   R G  
Sbjct: 395 QGTRPTTRMYNMLIDAYCKLGKIDDGFALK--EEMEREGIVPDVGTYNCLIAGLCRNGNI 452

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EAA+ LF+++ ++G+  D+ T++ L++  C   +   A  ++ EM    + P  +TY+ M
Sbjct: 453 EAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIM 511

Query: 376 IDGYAKAGRLDDALNMFSEM-KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           + GY K G L  A NM ++M K   + ++  SYN +L  Y++ G+ E+A ++  EM   G
Sbjct: 512 MKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571

Query: 435 IRKDAVTY 442
           +  + +TY
Sbjct: 572 LVPNRITY 579



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 181/412 (43%), Gaps = 58/412 (14%)

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD---IFTYNTLLDAIC----------- 345
           +TF  LL   +    +   R+  +  V  G D     IF   ++ D +C           
Sbjct: 103 LTF-KLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVL 161

Query: 346 ---KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
                ++ +L FE            + ++   ++    K  R  D   ++ EM    I  
Sbjct: 162 AYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQP 221

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY---GKQGKYDEVR 459
           +  ++N V++   K G+  +A  V ++M+  G   + V+YN L+ GY   G  GK  +  
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKAD 281

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            + ++M  + VSPNL T++ LID + K      ++++F+E     +  +V+ Y++LI+ L
Sbjct: 282 AVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGL 341

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
           C  G +  A+ + D+M   G++PN++TY+S+I+ F ++              G  KE+  
Sbjct: 342 CNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKN--------------GMMKEA-- 385

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI------------- 626
           LD   S   +  +   R  N +I  + +L     G   KE   R+ I             
Sbjct: 386 LDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445

Query: 627 LCILGVFQKMHKL------KIKPNVVTFSAILNA-CSRCNSFEDASMLLEEL 671
           LC  G  +   KL      K  P++VTF  ++   CSR  S   A+MLL+E+
Sbjct: 446 LCRNGNIEAAKKLFDQLTNKGLPDLVTFHILMEGYCSRGES-RKAAMLLKEM 496



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 95/458 (20%), Positives = 186/458 (40%), Gaps = 85/458 (18%)

Query: 321 LFNEMVHRGIDQDIFT--YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS---TM 375
           LF +++   ++ D+    Y  L+        ++L F+++  +       N   YS   + 
Sbjct: 70  LFRQLISSELNPDLCLRYYTWLVKNRDISVSLELTFKLLHSLA------NAKRYSKIRSF 123

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS-----IYAKLGRFEEALLVCKEM 430
           +DG+ + G      ++F  +       D V  N++++      YA   RFE      K  
Sbjct: 124 LDGFVRNGSDHQVHSIFHAISMC----DNVCVNSIIADMLVLAYANNSRFELGFEAFKRS 179

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
              G +  A++   L+    KQ +  +V  ++++M    + PN+ T++ +          
Sbjct: 180 GYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVV---------- 229

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
                                    I+ALCK G +  A  ++++M   G  PNVV+YN++
Sbjct: 230 -------------------------INALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTL 264

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
           ID + +              LG   +    DA+     K++ E   + N  +  F  L+ 
Sbjct: 265 IDGYCK--------------LGGNGKMYKADAVL----KEMVENEVSPN--LTTFNILID 304

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
              G  K +N     +   L VF++M    + PNV+T+++++N         +A  + ++
Sbjct: 305 ---GFWKDDN-----LPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDK 356

Query: 671 LRLFDNQVYGVA-HGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           +     Q   +  H L+ G+ ++ +  +AL +FD VK   +   +  YN L D     G+
Sbjct: 357 MVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGK 416

Query: 729 KRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARA 766
                 +  E +R  +  +V + +CL   L  +G   A
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 99/196 (50%), Gaps = 5/196 (2%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           ++ + +I    +LGK+D    + E    EG    V  ++ LI+   R+G  + A  +F+ 
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           +    L P+LVT++ +++  C +G  + +    +  +M + G++P  +T+N ++    + 
Sbjct: 462 LTNKGL-PDLVTFHILMEGYCSRG--ESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKE 518

Query: 313 GLWEAARNLFNEM-VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
           G  +AA N+  +M   R +  ++ +YN LL    +  +++ A  ++ EM  K + PN +T
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578

Query: 372 YSTMIDGYAKAGRLDD 387
           Y  + +     G + D
Sbjct: 579 YEIVKEEMVDKGFVPD 594


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 181/356 (50%), Gaps = 3/356 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L   G V+L+  +       G    ++ F++LI  +   G   EA+  ++ M R
Sbjct: 285 TTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIR 344

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + PN+V YNA++   C K  +     V +F+ M  NG  P+  T+++L+   ++ G  
Sbjct: 345 EGVVPNVVAYNALMHGLCSKRSLG--DAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDL 402

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  ++N M+  G   ++  Y  ++D +C+ +  + A+ ++  M  +N  PN VT++T 
Sbjct: 403 DGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF 462

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G   +GR+D A+ +F +M   G   +  +YN +L    K  RF EA  + K+ME  GI
Sbjct: 463 IKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + VTYN ++ GY   G   E   +  +M      P+ +T + +ID Y K G    A+Q
Sbjct: 523 ELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQ 582

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +           D++ Y++LI  +C +  VE A+  L  M  EGI PNV T+N ++
Sbjct: 583 LMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 186/373 (49%), Gaps = 6/373 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS L +LGKV  A+   E A++  +  +V  ++ALI+   +    +EA  + + M  
Sbjct: 220 TTLISSLCKLGKVKEAR---ELAMS--FTPSVPVYNALINGVCKEYTFEEAFQLLDEMMN 274

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN+++Y  +I+A    G + +  + +   M   G  P+  TF SL+      G   
Sbjct: 275 KGIDPNVISYTTIINALSDAG-NVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSH 333

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A + ++ M+  G+  ++  YN L+  +C    +  A  +  +M      PNV TYS +I
Sbjct: 334 EALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALI 393

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DGYAKAG LD A  +++ M   G   + V+Y  ++ +  +   F +A  + + M+     
Sbjct: 394 DGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCP 453

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + VT+N  + G    G+ D   ++F+QM      PN  TY+ L+D   K   + EA  +
Sbjct: 454 PNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGL 513

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            ++ +  G++ ++V Y+ +I   C  G++  A+ LL +M   G +P+ +T N +IDA+ +
Sbjct: 514 VKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCK 573

Query: 557 SATTECTVDDVER 569
                  +  ++R
Sbjct: 574 QGKVNIAIQLMDR 586



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 187/393 (47%), Gaps = 31/393 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI  L    ++D  + + +    EG   +   F ++I +Y R+G  ++A+  F  M+ + 
Sbjct: 82  MIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFR 141

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           +KP +  YN ++DA       F+ +  I+ +M ++G++P+  T+N LL    +    + A
Sbjct: 142 VKPTVKIYNHILDALLDEN-RFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGA 200

Query: 319 RNLFNEMVHRGIDQD------------------------------IFTYNTLLDAICKGA 348
             L  EM  +G D D                              +  YN L++ +CK  
Sbjct: 201 HKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEY 260

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
             + AF+++ EM  K I PNV++Y+T+I+  + AG ++ +L + ++M   G   +  ++ 
Sbjct: 261 TFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFT 320

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           +++  +   G   EAL     M   G+  + V YNAL+ G   +    +   +F QM+ +
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEIN 380

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
              PN+ TYS LID Y+K G    A +++      G   +VV Y+ ++D LC+N +   A
Sbjct: 381 GCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQA 440

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             L++ M  E   PN VT+N+ I     S   +
Sbjct: 441 YCLIENMQVENCPPNTVTFNTFIKGLCGSGRVD 473



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/458 (24%), Positives = 194/458 (42%), Gaps = 55/458 (12%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +   M   G+      F S++    R G  E A   F  M    +   +  YN +LDA+ 
Sbjct: 98  LLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALL 157

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
              +  +   I + M    + PNV TY+ ++    K  R+D A  +  EM   G   D V
Sbjct: 158 DENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEV 217

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           SY T++S   KLG+ +EA    +E+  S        YNAL+ G  K+  ++E  ++ ++M
Sbjct: 218 SYTTLISSLCKLGKVKEA----RELAMS-FTPSVPVYNALINGVCKEYTFEEAFQLLDEM 272

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
               + PN+++Y+T+I+  S  G  + ++ +  +    G   ++  +++LI      G  
Sbjct: 273 MNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGS 332

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
             A+   D M +EG+ PNVV YN+++          C+    +R LG        DA+  
Sbjct: 333 HEALDFWDRMIREGVVPNVVAYNALMHGL-------CS----KRSLG--------DAVSV 373

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
            +  ++   G   N  ++ +  L+   A  G  +            V+  M      PNV
Sbjct: 374 FNQMEIN--GCCPN--VRTYSALIDGYAKAGDLDGASE--------VWNWMITHGCHPNV 421

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRL---------FDNQVYGVAHGLLMGYRDNIWVQ 696
           V ++ +++   R + F  A  L+E +++         F+  + G     L G     W  
Sbjct: 422 VAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKG-----LCGSGRVDW-- 474

Query: 697 ALSLFDEVKLMDSSTASAFYNALTDMLW---HFGQKRG 731
           A+ +FD++        +  YN L D L     FG+  G
Sbjct: 475 AIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFG 512



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 177/403 (43%), Gaps = 17/403 (4%)

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TY  +++ +    +MD    ++ +M  + IS +   + ++I  Y +AG  + AL  F  
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M+   +      YN +L       RF+    +   M+  G+  +  TYN LL    K  +
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            D   ++  +M +    P+ ++Y+TLI    K G  KEA ++   F  +     V +Y+A
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPS-----VPVYNA 251

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           LI+ +CK    E A  LLDEM  +GI PNV++Y +II+A   +   E ++  + +   + 
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC------ 628
             S NL    S       + G   ++ +  + +++ E               LC      
Sbjct: 312 C-SPNLHTFTSLIKGFFLKGG--SHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLG 368

Query: 629 -ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM 687
             + VF +M      PNV T+SA+++  ++    + AS +   +         VA+  ++
Sbjct: 369 DAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMV 428

Query: 688 GY--RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
               R++++ QA  L + +++ +    +  +N     L   G+
Sbjct: 429 DVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 234/495 (47%), Gaps = 27/495 (5%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           AF+AL++A+  +G   +A+  F+ M  +  +P    YN ++ A    GV     + +++ 
Sbjct: 139 AFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGV-ILLALALYNR 197

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M+  G  P+R T+N L+    + G+   A  +F+EM+ RGI  ++  Y  LL ++C   +
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A +++  M  K   P+ VTY+  + G  K GR+++A      ++  G  L    Y+ 
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSC 317

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    +  RF+E     K M    I  D V Y  ++ G  + G+ ++     + MK   
Sbjct: 318 LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKG 377

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P+   Y+T++ V    G  + A  +  E  Q  L  D    + +I  LCK GLV+ A+
Sbjct: 378 FVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAM 437

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            + DEM + G  P V+TYN++ID F R    E       R L  + E  N  ++  +   
Sbjct: 438 QIFDEMGEHGCDPTVMTYNALIDGFYREGRLE-----EARMLFHKMEMGNNPSLFLRLTL 492

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
              +    D++ ++   +LV +    G        ++L    + + +    + P+VVT++
Sbjct: 493 GANQV--CDSESLR---KLVHDMCQSG--------QVLKAYKLLRSIIDSGVVPDVVTYN 539

Query: 650 AILNACSRCNSFEDASMLLEELRLF----DNQVYG-VAHGLLMGYRDNIWVQALSLFDEV 704
            ++N   +  + + A  L +EL+L     D   YG +  GLL  +R+N    A+ LF  +
Sbjct: 540 TLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREN---DAMMLFQNI 596

Query: 705 KLMDSSTASAFYNAL 719
               SS + + YN++
Sbjct: 597 LQSGSSPSLSIYNSM 611



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 179/379 (47%), Gaps = 49/379 (12%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           T + ++ ++ A   SG    A++++N M      PN  TYN ++D   K G+     +++
Sbjct: 171 TAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMA-GDALKM 229

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           FD+ML  G+ P+   +  LL+     G  + A  L   M  +G   D  TYN  L  +CK
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 347 GAQMDLAFE--IMAE---------------------------------MPAKNISPNVVT 371
             +++ AF+  +M +                                 M  +NISP+VV 
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+ MI G A+AGR++DAL+    MK  G   D   YNTVL +    G  E A  +  EM 
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML 409

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            + +  D+ T   ++ G  K+G  DE  ++F++M      P ++TY+ LID + + G  +
Sbjct: 410 QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 492 EAMQIFRE---------FKQAGLKADVVLYS----ALIDALCKNGLVESAVSLLDEMTKE 538
           EA  +F +         F +  L A+ V  S     L+  +C++G V  A  LL  +   
Sbjct: 470 EARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 539 GIRPNVVTYNSIIDAFGRS 557
           G+ P+VVTYN++I+   ++
Sbjct: 530 GVVPDVVTYNTLINGLCKA 548



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 199/420 (47%), Gaps = 32/420 (7%)

Query: 143 GDILKKFEFKL-----CGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA- 196
           GD LK F+  L          YT LL  L N G+  +A+Q             D+G L  
Sbjct: 224 GDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLG-------SMKDKGCLPD 276

Query: 197 ----SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
               +A +S L ++G+V+ A        + G+   +  +S LI    ++    E    + 
Sbjct: 277 EVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYK 336

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           +M   N+ P++V Y  +I  C + G   +  +   D M + G  PD   +N++L V    
Sbjct: 337 TMLERNISPDVVLYTIMIRGCAEAG-RIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDH 395

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  E A  L +EM+   +  D  T   ++  +CK   +D A +I  EM      P V+TY
Sbjct: 396 GDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTY 455

Query: 373 STMIDGYAKAGRLDDALNMFSEMK-------FLGIGL------DRVSYNTVLSIYAKLGR 419
           + +IDG+ + GRL++A  +F +M+       FL + L      D  S   ++    + G+
Sbjct: 456 NALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQ 515

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
             +A  + + +  SG+  D VTYN L+ G  K    D   R+F++++   +SP+ +TY T
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL-LDEMTKE 538
           LID   +     +AM +F+   Q+G    + +Y++++ +LC+   +  A++L LD + K+
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK 635



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 152/366 (41%), Gaps = 47/366 (12%)

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
           F+ +A+  A  +  +   ++ ++  ++ AGR  DA+  FS M           YNT+L  
Sbjct: 122 FDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKA 181

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
               G    AL +   M ++G   +  TYN L+ G  KQG   +  +MF++M    + PN
Sbjct: 182 LVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPN 241

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL- 532
           +  Y+ L+      G   EA+Q+    K  G   D V Y+A +  LCK G V  A   L 
Sbjct: 242 VKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLV 301

Query: 533 ---------------------------DE-------MTKEGIRPNVVTYNSIIDAFGRSA 558
                                      DE       M +  I P+VV Y  +I     + 
Sbjct: 302 MLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAG 361

Query: 559 TTECTVD--DVERDLGKQKES----ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
             E  +   DV +  G   ++      L  +C  D  D++ A    +++++    LV + 
Sbjct: 362 RIEDALSFLDVMKKKGFVPDTFCYNTVLKVLC--DHGDLERAHTLRSEMLQ--NNLVLDS 417

Query: 613 AGQGKKE-NRCRQEILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
             Q       C++ ++   + +F +M +    P V+T++A+++   R    E+A ML  +
Sbjct: 418 TTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHK 477

Query: 671 LRLFDN 676
           + + +N
Sbjct: 478 MEMGNN 483



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 124/288 (43%), Gaps = 32/288 (11%)

Query: 386 DDAL-NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           D+A+ +  ++ +  G+     ++  +++ ++  GR  +A+     M+    R  A  YN 
Sbjct: 118 DEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNT 177

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           +L      G       ++ +M A   +PN  TY+ L+D   K G+  +A+++F E    G
Sbjct: 178 ILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRG 237

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           +  +V +Y+ L+ +LC  G ++ AV LL  M  +G  P+ VTYN+ +          C V
Sbjct: 238 IMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL-------CKV 290

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                  G+  E+     M       +   G +      + G   A +  +G        
Sbjct: 291 -------GRVNEAFQRLVMLQDGGFALGLKGYS----CLIDGLFQARRFDEG-------- 331

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                 G ++ M +  I P+VV ++ ++  C+     EDA   L+ ++
Sbjct: 332 -----FGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374


>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
 gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
          Length = 384

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 183/348 (52%), Gaps = 2/348 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRS-GYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           A ++F   + +G   TV  ++ +I  Y R       A+ +   MK    KP+ + YN ++
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLV 60

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           +     G   +   +I DDM R+ V  + +T+ +L+   +  G  +  R LF EM  +G 
Sbjct: 61  NGLVNSG-RLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGE 119

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             + +TYN L+    +      A E+  EM     + +V TY+  I  Y K G L+D   
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER 179

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +  EM   G+  D+V+YNT+L +YAK   F +A  + +EM  +G R +  TYN +L    
Sbjct: 180 LLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSAR 239

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K+    E  ++FE +K+  V PN++TYS ++ +Y + GLY EA +++ E  +AG    ++
Sbjct: 240 KEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCII 299

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            YS LI++   +G+ + A++   +M K GI P+   Y +++DA+G++ 
Sbjct: 300 AYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAG 347



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 185/352 (52%), Gaps = 3/352 (0%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K+D A  + E     G       ++ L++    SG  + A  + + MKR  +  NLVTY 
Sbjct: 33  KLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYT 92

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            +I      G   +   ++F +M   G  P+  T+N+L+    R GL++ A  L++EM  
Sbjct: 93  NLIKEYANTG-RLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDG 151

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G  +D+ TYN  +    K   ++    ++ EM  K + P+ VTY+T++D YAK      
Sbjct: 152 VGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVK 211

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +  EM   G   +  +YN +LS   K     EA  + + ++S G+  + VTY+A+L 
Sbjct: 212 AHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLS 271

Query: 448 GYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            YG+ G Y E  +++++M +A C+ P ++ YS LI+ Y   G+Y+EA+  F++ +++G+ 
Sbjct: 272 LYGRHGLYTEAAKLWDEMIEAGCI-PCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIV 330

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            D  +Y+AL+DA  K G    A  L  EMTKEG  P+ +TY  ++ AF  + 
Sbjct: 331 PDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAG 382



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 167/341 (48%), Gaps = 1/341 (0%)

Query: 183 VKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSG 242
           V +E  K     L + +++ L   G+++ A+ I +    +     +  ++ LI  Y  +G
Sbjct: 43  VMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTG 102

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
             Q+   +F  MK     PN  TYNA+I   G+ G+ FK  +E++D+M   G   D  T+
Sbjct: 103 RLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGL-FKEALELYDEMDGVGCAKDVHTY 161

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           N  +A+  + GL E    L +EM  +G+  D  TYNTLLD   K +    A EI+ EM  
Sbjct: 162 NIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTE 221

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
               PN+ TY+ M+    K   + +A  +F  +K  G+  + V+Y+ +LS+Y + G + E
Sbjct: 222 AGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTE 281

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A  +  EM  +G     + Y+ L+  YG  G Y E    F+ M+   + P+   Y+ L+D
Sbjct: 282 AAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMD 341

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
            Y K G  +EA  ++ E  + G   D + Y  L+ A    G
Sbjct: 342 AYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAG 382



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 130/291 (44%), Gaps = 36/291 (12%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I      G++   + +F+   ++G     + ++ALI  YGR G  +EA+ +++ M    
Sbjct: 94  LIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVG 153

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
              ++ TYN  I   GK G+  + +  + D+M   GV PD++T+N+LL V ++   +  A
Sbjct: 154 CAKDVHTYNIAIAMYGKRGL-LEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKA 212

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST---- 374
             +  EM   G   +I+TYN +L +  K   +  A ++   + +K + PN+VTYS     
Sbjct: 213 HEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSL 272

Query: 375 -------------------------------MIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
                                          +I+ Y   G   +AL  F +M+  GI  D
Sbjct: 273 YGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPD 332

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
              Y  ++  Y K GR  EA L+  EM   G   D +TY  L+  +   G+
Sbjct: 333 TKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGR 383



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 170/374 (45%), Gaps = 39/374 (10%)

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKL-GRFEEALLVCKEMESSGIRKDAVTYNALL 446
           A ++F  M   G     V+Y  ++  Y +   + + AL + + M+ SG + D + YN L+
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLV 60

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G    G+ +   ++ + MK D VS NL+TY+ LI  Y+  G  ++  ++F+E K  G  
Sbjct: 61  NGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGES 120

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            +   Y+ALI    + GL + A+ L DEM   G   +V TYN  I  +G+    E    D
Sbjct: 121 PNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLE----D 176

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG---------QLVAEKAGQGK 617
           +ER          LD M   D K V     T N ++ V+          +++ E    G 
Sbjct: 177 MER---------LLDEM---DTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGY 224

Query: 618 KEN-----------RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
           + N           R  Q +     +F+ +    + PN+VT+SA+L+   R   + +A+ 
Sbjct: 225 RPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAK 284

Query: 667 LLEELRLFDNQVYGVAH-GLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLW 724
           L +E+         +A+ GL+  Y    ++ +AL+ F +++       +  Y AL D   
Sbjct: 285 LWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYG 344

Query: 725 HFGQKRGAQLVVLE 738
             G+ R A+L+  E
Sbjct: 345 KAGRCREAELLYFE 358



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 1/174 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  I       GY   ++ ++ ++S+  +     EA  +F ++K   + PN+VTY+A++ 
Sbjct: 212 AHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLS 271

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
             G+ G+ +    +++D+M+  G  P  I ++ L+      G+++ A   F +M   GI 
Sbjct: 272 LYGRHGL-YTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIV 330

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
            D   Y  L+DA  K  +   A  +  EM  +   P+ +TY  ++  +A AGRL
Sbjct: 331 PDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 188/343 (54%), Gaps = 14/343 (4%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
            V+ F+ +I+A  ++G   +A  V   MK Y   PN+V+YN +ID  C  GG    +  +
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281

Query: 286 -IFDDMLRNGVQPDRITFNSLLAVCSRGGLWE-----AARNLFNEMVHRGIDQDIFTYNT 339
            +  +M+ N V P+  TFN L+      G W+      +  +F EM+ + +  ++ +YN+
Sbjct: 282 AVLKEMVENDVSPNLTTFNILI-----DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L++ +C G ++  A  +  +M +  + PN++TY+ +I+G+ K   L +AL+MF  +K  G
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
                  YN ++  Y KLG+ ++   + +EME  GI  D  TYN L+ G  + G  +  +
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++F+Q+ +  + P+L+T+  L++ Y + G  ++A  + +E  + GLK   + Y+ ++   
Sbjct: 457 KLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515

Query: 520 CKNGLVESAVSLLDEMTKE-GIRPNVVTYNSIIDAFGRSATTE 561
           CK G +++A ++  +M KE  +R NV +YN ++  + +    E
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLE 558



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 221/444 (49%), Gaps = 48/444 (10%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           F     A+ RSGY    +S  +       KP ++   A++       V++     ++ +M
Sbjct: 169 FELGFEAFKRSGYYGYKLSALSC------KPLMI---ALLKENRSADVEY-----VYKEM 214

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK---G 347
           +R  +QP+  TFN ++    + G    AR++  +M   G   ++ +YNTL+D  CK    
Sbjct: 215 IRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGN 274

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +M  A  ++ EM   ++SPN+ T++ +IDG+ K   L  ++ +F EM    +  + +SY
Sbjct: 275 GKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISY 334

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N++++     G+  EA+ +  +M S+G++ + +TYNAL+ G+ K     E   MF  +K 
Sbjct: 335 NSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKG 394

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
               P    Y+ LID Y K G   +   +  E ++ G+  DV  Y+ LI  LC+NG +E+
Sbjct: 395 QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
           A  L D++T +G+ P++VT++ +++ + R               G+ +++A L    S+ 
Sbjct: 455 AKKLFDQLTSKGL-PDLVTFHILMEGYCRK--------------GESRKAAMLLKEMSK- 498

Query: 588 DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
              ++    T N ++K +      K G  K     R ++       +K  +L++  NV +
Sbjct: 499 -MGLKPRHLTYNIVMKGYC-----KEGNLKAATNMRTQM-------EKERRLRM--NVAS 543

Query: 648 FSAILNACSRCNSFEDASMLLEEL 671
           ++ +L   S+    EDA+MLL E+
Sbjct: 544 YNVLLQGYSQKGKLEDANMLLNEM 567



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 138/267 (51%), Gaps = 3/267 (1%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +F+  L++     V ++++LI+     G   EAIS+ + M    ++PNL+TYNA+I+   
Sbjct: 318 VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC 377

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K  +  K  +++F  +   G  P    +N L+    + G  +    L  EM   GI  D+
Sbjct: 378 KNDM-LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TYN L+  +C+   ++ A ++  ++ +K + P++VT+  +++GY + G    A  +  E
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKE 495

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS-GIRKDAVTYNALLGGYGKQG 453
           M  +G+    ++YN V+  Y K G  + A  +  +ME    +R +  +YN LL GY ++G
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTL 480
           K ++   +  +M    + PN +TY  +
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 152/365 (41%), Gaps = 73/365 (20%)

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
           N+  N +    ++  YA   R +     F    + G  L  +S   ++    K  R  + 
Sbjct: 148 NVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADV 207

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
             V KEM    I+ +  T+N ++    K GK ++ R + E MK    SPN+++Y+TLID 
Sbjct: 208 EYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDG 267

Query: 484 YSK----GGLYKE----------------------------------AMQIFREFKQAGL 505
           Y K    G +YK                                   +M++F+E     +
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV 327

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           K +V+ Y++LI+ LC  G +  A+S+ D+M   G++PN++TYN++I+ F ++        
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKN-------- 379

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
               D+ K+     LD   S   +      R  N +I  + +L     G   KE   R+ 
Sbjct: 380 ----DMLKEA----LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431

Query: 626 I-------------LCILGVFQKMHKL------KIKPNVVTFSAILNACSRCNSFEDASM 666
           I             LC  G  +   KL      K  P++VTF  ++    R      A+M
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAM 491

Query: 667 LLEEL 671
           LL+E+
Sbjct: 492 LLKEM 496



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 95/465 (20%), Positives = 184/465 (39%), Gaps = 99/465 (21%)

Query: 321 LFNEMVHRGIDQDIFT--YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS---TM 375
           LF +++   +D D+    Y+ L+        ++L F+++  +       N   YS   + 
Sbjct: 70  LFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLA------NAKRYSKIRSF 123

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS-----IYAKLGRFEEALLVCKEM 430
           +DG+ + G      ++F  +       D V  N++++      YA   RFE      K  
Sbjct: 124 LDGFVRNGSDHQVHSIFHAISMC----DNVCVNSIIADMLVLAYANNSRFELGFEAFKRS 179

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
              G +  A++   L+    K+ +  +V  ++++M    + PN+ T++            
Sbjct: 180 GYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFN------------ 227

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
                                   +I+ALCK G +  A  ++++M   G  PNVV+YN++
Sbjct: 228 -----------------------VVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTL 264

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ-DDKDVQEAGRTDNQIIKVFGQLV 609
           ID + +              LG   +    DA+  +  + DV     T N +I  F    
Sbjct: 265 IDGYCK--------------LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFW--- 307

Query: 610 AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
                  K +N     +   + VF++M    +KPNV+++++++N    CN       + E
Sbjct: 308 -------KDDN-----LPGSMKVFKEMLDQDVKPNVISYNSLINGL--CN----GGKISE 349

Query: 670 ELRLFDNQVYGVAHGLLMGY--------RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
            + + D  V       L+ Y        ++++  +AL +F  VK   +   +  YN L D
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLID 409

Query: 722 MLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARA 766
                G+      +  E +R  +  +V + +CL   L  +G   A
Sbjct: 410 AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 99/196 (50%), Gaps = 5/196 (2%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           ++ + +I    +LGK+D    + E    EG    V  ++ LI+   R+G  + A  +F+ 
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           +    L P+LVT++ +++  C KG  + +    +  +M + G++P  +T+N ++    + 
Sbjct: 462 LTSKGL-PDLVTFHILMEGYCRKG--ESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKE 518

Query: 313 GLWEAARNLFNEM-VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
           G  +AA N+  +M   R +  ++ +YN LL    +  +++ A  ++ EM  K + PN +T
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578

Query: 372 YSTMIDGYAKAGRLDD 387
           Y  + +     G + D
Sbjct: 579 YEIVKEEMVDQGFVPD 594


>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 200/389 (51%), Gaps = 28/389 (7%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L ++GK   A+ +FET L          +SAL+  Y + G  + A  V   M++ ++ PN
Sbjct: 90  LFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPN 149

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           ++T++++I+   K G+     V++  +M++  V P+ I +  L+    + G  + A +  
Sbjct: 150 VITFSSIINGYAKKGM-LSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFC 208

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            EM  R +++    ++ LL+ + +  +MD A  ++ +M +K I P++V Y+++IDGY K 
Sbjct: 209 KEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKE 268

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF--------------------EE 422
           G    AL++  EMK   I  D V+YN ++    +LG++                    E+
Sbjct: 269 GNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTED 328

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           AL +  EM+S GI  +AVTYN L+GG  K G  ++     ++M      P  +T+  L+ 
Sbjct: 329 ALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVK 388

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            YS+     + +QI  +   +GL+  + +Y+ LI   C+ G+   A  +LDEM K GI  
Sbjct: 389 AYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISA 448

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDL 571
           ++VTYN++I  +       CT   VE+ L
Sbjct: 449 DLVTYNALIRGY-------CTGSHVEKAL 470



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 181/357 (50%), Gaps = 27/357 (7%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V   S+++  + R G   EA  +F  M    L PN V+Y  +I++  K G     V+E F
Sbjct: 10  VVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSG----RVMEAF 65

Query: 288 D---DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +    M+  G+  D +T  +++    + G  + A  +F  ++   +  +  TY+ LLD  
Sbjct: 66  NLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGY 125

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK  +M+LA  ++ +M  +++ PNV+T+S++I+GYAK G L  A+++  EM    +  + 
Sbjct: 126 CKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNT 185

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           + Y  ++  Y K G  + A   CKEM+S  + +  V ++ LL    + G+ DE R +   
Sbjct: 186 IVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIID 245

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG- 523
           M +  + P+++ Y++LID Y K G    A+ I +E K+  ++ DVV Y+ALI  L + G 
Sbjct: 246 MYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK 305

Query: 524 -------------------LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
                                E A+ +L+EM   GI PN VTYN +I    ++   E
Sbjct: 306 YDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVE 362



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 231/475 (48%), Gaps = 29/475 (6%)

Query: 290 MLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           M+ NG+ PD +T +S+L   C  G L EAA  LF EM   G+D +  +Y T+++++ K  
Sbjct: 1   MIMNGIMPDVVTCSSILYGFCRHGKLTEAAV-LFREMYEMGLDPNHVSYATIINSLFKSG 59

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++  AF + ++M  + IS ++VT +T++DG  K G+  +A  +F  +  L +  + V+Y+
Sbjct: 60  RVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYS 119

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +L  Y KLG+ E A LV ++ME   +  + +T+++++ GY K+G   +   +  +M   
Sbjct: 120 ALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQR 179

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V PN + Y+ LID Y K G    A    +E K   L+   V++  L++ L + G ++ A
Sbjct: 180 NVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEA 239

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
            SL+ +M  +GI P++V Y S+ID + +                   + A L  +    +
Sbjct: 240 RSLIIDMYSKGIDPDIVNYASLIDGYFKEGN----------------QLAALSIVQEMKE 283

Query: 589 KDVQEAGRTDNQIIKVFGQL-------VAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
           K+++      N +IK   +L       V  +  +      C+ E    L +  +M    I
Sbjct: 284 KNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTE--DALDILNEMKSYGI 341

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALS 699
            PN VT++ ++    +  + E A   L+E+ + +     + H  L+  Y R     + L 
Sbjct: 342 MPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQ 401

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
           + +++       +   YN L  +    G  R A++V+ E  +R +  ++ + + L
Sbjct: 402 IHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNAL 456



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 183/373 (49%), Gaps = 21/373 (5%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R GK+  A  +F      G      +++ +I++  +SG   EA ++ + M    +  ++V
Sbjct: 22  RHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIV 81

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           T   V+D   K G   K   E+F+ +L+  + P+ +T+++LL    + G  E A  +  +
Sbjct: 82  TCTTVMDGLFKVG-KTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQK 140

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M    +  ++ T++++++   K   +  A +++ EM  +N+ PN + Y+ +IDGY KAG 
Sbjct: 141 MEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGE 200

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
            D A +   EMK   +    V ++ +L+   ++GR +EA  +  +M S GI  D V Y +
Sbjct: 201 QDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYAS 260

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY-------------- 490
           L+ GY K+G       + ++MK   +  +++ Y+ LI    + G Y              
Sbjct: 261 LIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGL 320

Query: 491 ------KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
                 ++A+ I  E K  G+  + V Y+ LI  LCK G VE A S LDEM      P  
Sbjct: 321 APDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTP 380

Query: 545 VTYNSIIDAFGRS 557
           +T+  ++ A+ RS
Sbjct: 381 ITHKFLVKAYSRS 393



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 184/379 (48%), Gaps = 22/379 (5%)

Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
           +  R  +   +   +++ L R+G++D A+++     ++G    +  +++LI  Y + G  
Sbjct: 212 KSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQ 271

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGK-GGVDFKHVVEIFDDMLRNGVQPDRITFN 303
             A+S+   MK  N++ ++V YNA+I    + G  D ++V      M+  G+ PD  T  
Sbjct: 272 LAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVC---SRMIELGLAPDCKT-- 326

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
                       E A ++ NEM   GI  +  TYN L+  +CK   ++ A   + EM   
Sbjct: 327 ------------EDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVM 374

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
              P  +T+  ++  Y+++ + D  L +  ++   G+ L    YNT+++++ +LG   +A
Sbjct: 375 EFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKA 434

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
            +V  EM   GI  D VTYNAL+ GY      ++  + + QM  D ++PN+ TY+TL+  
Sbjct: 435 KVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGG 494

Query: 484 YSKGGL----YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
            S  GL     +E  ++  E  + GL  +   Y  L+    + G  +  + L  EM  +G
Sbjct: 495 LSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKG 554

Query: 540 IRPNVVTYNSIIDAFGRSA 558
             P + TYN +I  + +S 
Sbjct: 555 FVPTLKTYNVLISDYAKSG 573



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 127/270 (47%), Gaps = 5/270 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L + G V+ A++  +  L   +  T      L+ AY RS    + + +   +    
Sbjct: 351 LIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASG 410

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           L+ +L  YN +I    + G+  K  V + D+M++ G+  D +T+N+L+     G   E A
Sbjct: 411 LELSLTVYNTLITVFCRLGMTRKAKV-VLDEMVKRGISADLVTYNALIRGYCTGSHVEKA 469

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGA----QMDLAFEIMAEMPAKNISPNVVTYST 374
              +++M   GI  +I TYNTLL  +         M+   ++++EM  + + PN  TY  
Sbjct: 470 LKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDI 529

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++ GY + G     + +  EM   G      +YN ++S YAK G+  EA  +  ++ + G
Sbjct: 530 LVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKG 589

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
              ++ TY+ L  G+       E+ R  ++
Sbjct: 590 RIPNSFTYDILTCGWLNLSYEPEIDRSLKR 619


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 142/564 (25%), Positives = 261/564 (46%), Gaps = 73/564 (12%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           +LG + LA  +FET         V+ ++ LI    +    ++A  +F  M   NL PN V
Sbjct: 78  KLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRV 137

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           T+N +ID  C  G VD    + + + M +  V+P  ITFNSLL+   +    E AR + N
Sbjct: 138 TFNTLIDGYCKAGEVDV--AIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLN 195

Query: 324 EM------------------------------------VHRGIDQDIFTYNTLLDAICKG 347
           E+                                    + +G+  D +T + LL+ +CK 
Sbjct: 196 EIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKE 255

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +++ A E++  +    + P  V Y+T+++GY + G +D A+    +M+  G+  + +++
Sbjct: 256 GKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAF 315

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N+V+  + ++   ++A    K+M   GI     TYN L+ GYG+   +    ++ E+M+ 
Sbjct: 316 NSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEE 375

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
           +   PN+++Y +LI+   K G   EA  + R+    G+  +  +Y+ LID  C  G +  
Sbjct: 376 NGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLRE 435

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
           A+   DEM+K GI   +VTYNS+I    +              +GK KE+  +  +    
Sbjct: 436 ALRFFDEMSKNGIGATIVTYNSLIKGLCK--------------MGKLKEAEEMFFL---- 477

Query: 588 DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
              +   G   + I   +  L++  +  G  + +C       L +++ M KL +KP + T
Sbjct: 478 ---ITSTGHCPDVI--TYNSLISGYSNAGNSQ-KC-------LELYETMKKLGLKPTINT 524

Query: 648 FSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQ-ALSLFDEVKL 706
           F  +++ CS+       ++  E L++  +    V + ++  Y++   VQ A SL  E+  
Sbjct: 525 FHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVD 584

Query: 707 MDSSTASAFYNALTDMLWHFGQKR 730
           M     +  YN+L  +L H  + +
Sbjct: 585 MGVRPDNKTYNSL--ILGHLKEGK 606



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 218/468 (46%), Gaps = 56/468 (11%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
           F +V+++F +M+  G +PD++ +   +    + G  + A  LF  M  R +  ++F YN 
Sbjct: 47  FDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNV 106

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+  +CK  ++  A ++  EM  +N+ PN VT++T+IDGY KAG +D A+ +   MK   
Sbjct: 107 LIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEK 166

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK-YDEV 458
           +    +++N++LS   K  R EEA  +  E++ +G   D  TY+ +  G  K        
Sbjct: 167 VEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAA 226

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             ++ +     V  +  T S L++   K G  ++A ++ +   + GL    V+Y+ +++ 
Sbjct: 227 LDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNG 286

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
            C+ G ++ A+  +++M   G+RPN + +NS+ID F      +   + V++ +G      
Sbjct: 287 YCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVG------ 340

Query: 579 NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
                     K +  +  T N +I  +G+L           +RC Q       + ++M +
Sbjct: 341 ----------KGIAPSVETYNILIDGYGRLCV--------FSRCFQ-------ILEEMEE 375

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIW---- 694
              KPNV+++ +++N   +     +A M+L ++         V  G+L     NI+    
Sbjct: 376 NGEKPNVISYGSLINCLCKDGKILEAEMVLRDM---------VGRGVL--PNANIYNMLI 424

Query: 695 ---------VQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
                     +AL  FDE+           YN+L   L   G+ + A+
Sbjct: 425 DGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAE 472



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 175/367 (47%), Gaps = 37/367 (10%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           +D A+   +  + +G   +V  ++ LI  YGR         +   M+    KPN+++Y +
Sbjct: 328 IDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGS 387

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVH 327
           +I+   K G   +  + +  DM+  GV P+   +N L+   C+ G L EA R  F+EM  
Sbjct: 388 LINCLCKDGKILEAEM-VLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALR-FFDEMSK 445

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            GI   I TYN+L+  +CK  ++  A E+   + +    P+V+TY+++I GY+ AG    
Sbjct: 446 NGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQK 505

Query: 388 ALNMFSEMKFLGI-----------------GL-----------------DRVSYNTVLSI 413
            L ++  MK LG+                 G+                 DRV YN ++  
Sbjct: 506 CLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHC 565

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           Y + G  ++A  + KEM   G+R D  TYN+L+ G+ K+GK  E + + + MKA  + P 
Sbjct: 566 YQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPE 625

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
             TYS LI  +     +  A   +RE  + G   +V + + L   L K+G ++ A S+  
Sbjct: 626 ADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICS 685

Query: 534 EMTKEGI 540
           EM   G+
Sbjct: 686 EMIANGM 692



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 183/393 (46%), Gaps = 37/393 (9%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            S +++ L + GKV+ A+ + ++ +  G       ++ +++ Y + G    AI     M+
Sbjct: 245 CSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQME 304

Query: 256 RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
              L+PN + +N+VID  C    +D     E    M+  G+ P   T+N L+    R  +
Sbjct: 305 SRGLRPNCIAFNSVIDKFCEMQMID--KAEEWVKKMVGKGIAPSVETYNILIDGYGRLCV 362

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           +     +  EM   G   ++ +Y +L++ +CK  ++  A  ++ +M  + + PN   Y+ 
Sbjct: 363 FSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNM 422

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDG    G+L +AL  F EM   GIG   V+YN+++    K+G+ +EA  +   + S+G
Sbjct: 423 LIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTG 482

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK---------------ADC---------- 469
              D +TYN+L+ GY   G   +   ++E MK               + C          
Sbjct: 483 HCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKET 542

Query: 470 ---------VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
                    +SP+ + Y+ +I  Y + G  ++A  + +E    G++ D   Y++LI    
Sbjct: 543 LFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHL 602

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           K G +     L+D+M  +G+ P   TY+ +I  
Sbjct: 603 KEGKLSETKDLVDDMKAKGLIPEADTYSLLIQG 635



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 127/239 (53%), Gaps = 2/239 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  L ++GK+  A+ +F    + G+   V  +++LIS Y  +G  Q+ + ++ +MK+
Sbjct: 456 NSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKK 515

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             LKP + T++ +I  C K G+  K    +F++ML+  + PDR+ +N+++      G  +
Sbjct: 516 LGLKPTINTFHPLISGCSKEGIKLKET--LFNEMLQMNLSPDRVVYNAMIHCYQETGHVQ 573

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +L  EMV  G+  D  TYN+L+    K  ++    +++ +M AK + P   TYS +I
Sbjct: 574 KAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLI 633

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
            G+      + A   + EM   G   +    N + +   K GR +EA  +C EM ++G+
Sbjct: 634 QGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGM 692



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 34/157 (21%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           + L + +F   L          ++A+I  Y  +G+ Q+A S+   M    ++P+  TYN+
Sbjct: 537 IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNS 596

Query: 269 VI-----------------DACGKGGV-----------------DFKHVVEIFDDMLRNG 294
           +I                 D   KG +                 DF      + +ML NG
Sbjct: 597 LILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENG 656

Query: 295 VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
             P+    N L     + G  + A+++ +EM+  G+D
Sbjct: 657 FLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGMD 693


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 190/337 (56%), Gaps = 6/337 (1%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V+A++A+IS + ++   + A +V + MKR    P++VT+N +I   CGKG +D    +++
Sbjct: 44  VFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDL--ALKV 101

Query: 287 FDDMLR-NGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           F+++L+ N  +P  IT+  L+ A    GG+ EA + L +EM+ RG++ D FTYN +   +
Sbjct: 102 FEELLKDNNCKPTLITYTILIEAYILEGGIDEALK-LLDEMLSRGLEPDTFTYNVITRGL 160

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK  ++D AFE +  + ++   P+V+TY+ ++      G+ D+     SE+   G   + 
Sbjct: 161 CKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNV 220

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V+Y+ ++S   + G+ EE++ + K M+  G+  DA  Y+ L+  + ++GK D      + 
Sbjct: 221 VTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDC 280

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M  D   P+++ Y+T++    K G    A++IF +  + G   +V  Y+ ++ AL  +G 
Sbjct: 281 MICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGD 340

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
              A+ ++ +M  +GI P+V+TYNS+I    R    +
Sbjct: 341 RYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVD 377



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 177/363 (48%), Gaps = 4/363 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGN-TVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           MI      GK+DLA  +FE  L +     T+  ++ LI AY   G   EA+ + + M   
Sbjct: 85  MIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSR 144

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            L+P+  TYN +    C +G VD     E    +   G +PD IT+N LL      G W+
Sbjct: 145 GLEPDTFTYNVITRGLCKEGKVD--RAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWD 202

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
                 +E+  RG + ++ TY+ L+ ++C+  +++ +  ++  M  K ++P+   Y  +I
Sbjct: 203 EGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLI 262

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             + + G+LD A+     M   G   D V+YNT+++   K G  + A+ +  +++  G  
Sbjct: 263 AAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCP 322

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +  +YN +L      G       M  QM +  + P+++TY++LI    + G+  EA+ +
Sbjct: 323 PNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGL 382

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             +      + ++V Y  ++  LCK   ++ A+ +L  M + G +PN  TY  +I+  G 
Sbjct: 383 LADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGF 442

Query: 557 SAT 559
           S +
Sbjct: 443 SGS 445



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 205/436 (47%), Gaps = 25/436 (5%)

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +PD   +N++++   +    E+A+ + + M  +G   D+ T+N ++   C   ++DLA +
Sbjct: 41  KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALK 100

Query: 356 IMAEM-PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY 414
           +  E+    N  P ++TY+ +I+ Y   G +D+AL +  EM   G+  D  +YN +    
Sbjct: 101 VFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGL 160

Query: 415 AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
            K G+ + A    + + S G + D +TYN LL     QGK+DE  +   ++ +    PN+
Sbjct: 161 CKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNV 220

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           +TYS LI    + G  +E++ + +  K+ GL  D   Y  LI A C+ G ++ A+  LD 
Sbjct: 221 VTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDC 280

Query: 535 MTKEGIRPNVVTYNSIIDAFGRSATTECTV------DDVERDLGKQKESANLDAMCSQDD 588
           M  +G  P++V YN+I+ A  ++   +  V      D+V         +  L A+ S  D
Sbjct: 281 MICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGD 340

Query: 589 K------DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
           +        Q   +  +  +  +  L++     G  +          +G+   M   + +
Sbjct: 341 RYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEA--------IGLLADMLSGRFQ 392

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL---MGYRDNIWVQALS 699
           PN+V++  +L    + +  +DA  +L  +     Q     + LL   +G+  +   QA+ 
Sbjct: 393 PNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGS-RTQAME 451

Query: 700 LFDEVKLMDSSTASAF 715
           L + + +M++ +  +F
Sbjct: 452 LANSLYIMNAISEDSF 467



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 139/277 (50%), Gaps = 11/277 (3%)

Query: 143 GDILKKFEF------KLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK 194
           G + + FEF      + C  D   Y  LLR L N+G+W +  +  +    R    N    
Sbjct: 164 GKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVV-- 221

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
             S +IS L R GK++ + N+ +    +G     Y +  LI+A+ R G    AI   + M
Sbjct: 222 TYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCM 281

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
                 P++V YN ++ A  K G +  H VEIF  +   G  P+  ++N++L+     G 
Sbjct: 282 ICDGFLPDIVNYNTIMAALCKNG-NGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGD 340

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A  + ++M+ +GID D+ TYN+L+  +C+   +D A  ++A+M +    PN+V+Y T
Sbjct: 341 RYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKT 400

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
           ++ G  KA R+DDA+ + + M   G   +  +Y  ++
Sbjct: 401 VLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLI 437


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 168/326 (51%), Gaps = 1/326 (0%)

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           + L+  + R G        F  M     KP + TYN +ID   K G D +    +F++M 
Sbjct: 102 NGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEG-DIEAASGLFEEMK 160

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
             G+ PD +T+NS++    + G  +     F EM     + D+ TYNTL++  CK  ++ 
Sbjct: 161 FRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLP 220

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
              E   EM    + PNVV+YST++D + K   +  AL  + +M+ LG+  +  +Y +++
Sbjct: 221 KGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLV 280

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
             Y K+G   +A  +  EM   G+  + VTY AL+ G     +  E   +F +M    V 
Sbjct: 281 DAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVI 340

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           PNL +Y+ LI  + K      A+++  E K  G+K D++LY   I +LC    +E+A  +
Sbjct: 341 PNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVV 400

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRS 557
           ++EM ++GI+ N   Y +++DA+ +S
Sbjct: 401 MNEMQEKGIKANTFIYTTLMDAYFKS 426



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 204/435 (46%), Gaps = 50/435 (11%)

Query: 172 WSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAF 231
           + +A+QCF+  +KR  R   + +  + ++    RLGK D  K  F+  +  G   TV+ +
Sbjct: 79  FEEALQCFS-KMKRC-RVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTY 136

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           + +I    + G  + A  +F  MK   L P+ VTYN++ID  GK G      V  F++M 
Sbjct: 137 NIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVG-RLDDTVYFFEEMK 195

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
               +PD IT+N+L+    + G        F EM   G+  ++ +Y+TL+DA CK   M 
Sbjct: 196 SMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQ 255

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A +   +M    + PN  TY++++D Y K G L DA  +  EM  +G+  + V+Y  ++
Sbjct: 256 QALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALI 315

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
                + R +EA  +  +M ++G+  +  +Y AL+ G+ K    D    + ++MK   + 
Sbjct: 316 DGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIK 375

Query: 472 PNLLTYSTLIDVYSKGGLYK--EAMQIFREFKQAGLKADVVLYSALIDA----------- 518
           P+LL Y T I  +S  GL K   A  +  E ++ G+KA+  +Y+ L+DA           
Sbjct: 376 PDLLLYGTFI--WSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGL 433

Query: 519 ------------------------LCKNGLVESAVSLLDEMTKE-GIRPNVVTYNSIIDA 553
                                   LCKN LV  A+     ++ + G++ N   Y ++ID 
Sbjct: 434 HLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDG 493

Query: 554 FGRSATTECTVDDVE 568
                   C  D VE
Sbjct: 494 L-------CKEDQVE 501



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 190/359 (52%), Gaps = 4/359 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI   G++G++D     FE   +      V  ++ LI+ + + G   + +  F  MK+
Sbjct: 172 NSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQ 231

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             LKPN+V+Y+ ++DA  K  +  +  ++ + DM R G+ P+  T+ SL+ A C  G L 
Sbjct: 232 SGLKPNVVSYSTLVDAFCKEDM-MQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLS 290

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +A R L +EM   G++ ++ TY  L+D +C   ++  A E+  +M    + PN+ +Y+ +
Sbjct: 291 DAFR-LADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTAL 349

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G+ KA  +D AL +  EMK  GI  D + Y T +     L + E A +V  EM+  GI
Sbjct: 350 IHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGI 409

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + +   Y  L+  Y K     E   + E+M    +    +T+  LID   K  L  +A+ 
Sbjct: 410 KANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAID 469

Query: 496 IF-REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            F R     GL+A+  +Y+A+ID LCK   VE+A +L ++M ++G+ P+   Y S+ID 
Sbjct: 470 YFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDG 528



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 146/272 (53%), Gaps = 2/272 (0%)

Query: 285 EIFDDM--LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           ++FD +   RN   P    F++L +V     ++E A   F++M    +     + N LL 
Sbjct: 47  DVFDVLWSTRNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLH 106

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
              +  + D       +M      P V TY+ MID   K G ++ A  +F EMKF G+  
Sbjct: 107 KFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIP 166

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D V+YN+++  Y K+GR ++ +   +EM+S     D +TYN L+  + K GK  +    F
Sbjct: 167 DTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFF 226

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +MK   + PN+++YSTL+D + K  + ++A++ + + ++ GL  +   Y++L+DA CK 
Sbjct: 227 REMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKI 286

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           G +  A  L DEM++ G+  NVVTY ++ID  
Sbjct: 287 GNLSDAFRLADEMSQVGVEWNVVTYTALIDGL 318



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 117/280 (41%), Gaps = 39/280 (13%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++    ++G +  A  + +     G    V  ++ALI         +EA  +F  M  
Sbjct: 277 TSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVT 336

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             + PNL +Y A+I    K   +    +E+ D+M   G++PD + + + + ++C    + 
Sbjct: 337 AGVIPNLASYTALIHGFVKAK-NMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKI- 394

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDA-------------------------------- 343
           EAA+ + NEM  +GI  + F Y TL+DA                                
Sbjct: 395 EAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVL 454

Query: 344 ---ICKGAQMDLAFEIMAEMPAK-NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
              +CK   +  A +    +     +  N   Y+ MIDG  K  +++ A  +F +M   G
Sbjct: 455 IDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKG 514

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
           +  DR +Y +++    K G   +AL +  +M   G+   A
Sbjct: 515 LVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGA 554


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 211/397 (53%), Gaps = 19/397 (4%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI---FETALNEGYGN 226
           G     IQCF     R  RK++         ++L R+ K++    +   +   L+ G+  
Sbjct: 184 GFIPDVIQCF-----RLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPL 238

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD----FK 281
            VY F+ L++ + + G   +A  VF+ + + +L+P +V++N +I+  C  G +D     K
Sbjct: 239 NVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLK 298

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
           H +E      ++  +PD  T+++L+    +    + A  LF EM  RG+  +   + TL+
Sbjct: 299 HHME------KSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLI 352

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
               +  Q+DL  E   +M +K + P++V Y+T+++G+ K G L  A N+   M   G+ 
Sbjct: 353 HGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLR 412

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D+V+Y T++  + + G  + AL + KEM+ +GI  D V ++AL+ G  K+G+  +  R 
Sbjct: 413 PDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERA 472

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
             +M    + P+ +TY+ ++D + K G  +   ++ +E +  G   +VV Y+ L++ LCK
Sbjct: 473 LREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCK 532

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            G +++A  LLD M   G+ P+ +TYN++++   R A
Sbjct: 533 LGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHA 569



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 158/311 (50%), Gaps = 10/311 (3%)

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           NV  ++ +++ + K G + DA  +F E+    +    VS+NT+++ Y K+G  +    + 
Sbjct: 239 NVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLK 298

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
             ME S  R D  TY+AL+    K+ K D   R+F +M    + PN + ++TLI  +S+ 
Sbjct: 299 HHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRN 358

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G      + +++    GL+ D+VLY+ L++  CKNG + +A +++D M + G+RP+ VTY
Sbjct: 359 GQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTY 418

Query: 548 NSIIDAFGRSATTECTV------DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
            ++ID F R    +  +      D    +L +   SA +  MC +    V +A R   ++
Sbjct: 419 TTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEG--RVIDAERALREM 476

Query: 602 IKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           ++  G    +       +  C++ +      + ++M      PNVVT++ +LN   +   
Sbjct: 477 LRA-GMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQ 535

Query: 661 FEDASMLLEEL 671
            ++A MLL+ +
Sbjct: 536 MKNADMLLDAM 546


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 191/353 (54%), Gaps = 12/353 (3%)

Query: 203 LGRLGKVDLAKNIFET--ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN-SMKRYNL 259
           L R+GK++ A+ I       N    NT      LI+ Y  SG  +EA S  N +M  +  
Sbjct: 333 LCRIGKLNEARKILIKIPCPNNAILNT------LINGYVMSGQLKEAQSFLNETMINFGF 386

Query: 260 KPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           +P++ TYN ++   C +G + F    ++ ++M R G +P+ IT+  L+    + GL E A
Sbjct: 387 QPDIFTYNILMHGLCKEGSLSFAR--DLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             + +EM  RG+  +   YN L+ A+C+  ++ +A  +++EM  K   P++ TY+++I G
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYG 504

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K  R+D+A  +F  M   G   + V+YNT++    + G F++AL +  +M   G   D
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            +TYN L+  + K G  ++   ++EQM  D +  + ++ + +I+   K G    A +  R
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +    G   D+V Y+++++ LCK G ++ A++L D +  EG+RP+  TYN+ I
Sbjct: 625 DAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 170/345 (49%), Gaps = 1/345 (0%)

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           ET +N G+   ++ ++ L+    + G    A  + N M R   +PN++TY  +++   K 
Sbjct: 379 ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKA 438

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G+  +    +  +M   G+  + + +N L+    R      A NL +EM  +G   D+FT
Sbjct: 439 GL-LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFT 497

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN+L+  +CK  ++D AF +   M       N VTY+T+I    + G    AL + ++M 
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
           F G  LD+++YN ++  + K+G  E+ L + ++M   G+  D ++ N ++ G  K GK D
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
                          P+++TY+++++   K G  KEA+ +F   +  G++ D   Y+  I
Sbjct: 618 NAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
              CK G+V  A S      + G  P+ +T+N ++    + +  E
Sbjct: 678 SWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQE 722



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 184/417 (44%), Gaps = 66/417 (15%)

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           +A N+F   L++G   TV+ F  ++ A         A S+   M ++   PN + Y  +I
Sbjct: 201 VATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLI 260

Query: 271 DA---------------------CGKGGVDFKHVV-------------EIFDDMLRNGVQ 296
            A                     C      F  V+             ++ D ML  G  
Sbjct: 261 HALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFY 320

Query: 297 PDRITFNSLL-AVCSRGGLWEA------------------------------ARNLFNE- 324
           PD +T+  LL  +C  G L EA                              A++  NE 
Sbjct: 321 PDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNET 380

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M++ G   DIFTYN L+  +CK   +  A +++ EM  +   PNV+TY+ +++G  KAG 
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           L++A  +  EM   G+ ++ V YN ++    +  +   AL +  EM + G + D  TYN+
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G  K  + DE  R+F  M  D    N +TY+TLI    + G +++A+ +  +    G
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
              D + Y+ LI A CK G +E  + L ++M  +G+  + ++ N +I+   +    +
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 179/405 (44%), Gaps = 41/405 (10%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR- 256
             I+ LG +GK  L   +      EG       F  ++  YG++G   +AI +   M+  
Sbjct: 117 VFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAV 176

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           Y  +P   +Y+ V++    G    +    +F DML  GV P   TF  ++         +
Sbjct: 177 YLCEPTFKSYDLVLEILVTGNCP-QVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVD 235

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +A +L  +M   G   +   Y TL+ A+ +  Q+  A +++ EM      P+V T++ +I
Sbjct: 236 SACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVI 295

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSY----------------------------- 407
            G  K  ++ DA  +   M   G   D ++Y                             
Sbjct: 296 HGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNA 355

Query: 408 --NTVLSIYAKLGRFEEALLVCKE-MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
             NT+++ Y   G+ +EA     E M + G + D  TYN L+ G  K+G     R +  +
Sbjct: 356 ILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 415

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M      PN++TY+ L++   K GL +EA  +  E    GL  + V+Y+ LI ALC+   
Sbjct: 416 MSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEK 475

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           V  A++LL EM  +G +P++ TYNS+I          C VD ++ 
Sbjct: 476 VHVALNLLSEMCTKGCKPDLFTYNSLIYGL-------CKVDRIDE 513



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 121/521 (23%), Positives = 227/521 (43%), Gaps = 47/521 (9%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           +GY +T   +   I+  G  G  +    +   MK   +      +  ++   GK G   +
Sbjct: 106 KGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQ 165

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            +  + D       +P   +++ +L +   G   + A N+F +M+ +G+   +FT+  ++
Sbjct: 166 AIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVM 225

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
            A+C   ++D A  ++ +M      PN + Y T+I   ++  ++ +AL +  EM  +G  
Sbjct: 226 KALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCM 285

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D  ++N V+    K+ +  +A  +   M   G   D +TY  LL G  + GK +E R++
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI 345

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE-FKQAGLKADVVLYSALIDALC 520
              +K  C  PN    +TLI+ Y   G  KEA     E     G + D+  Y+ L+  LC
Sbjct: 346 L--IKIPC--PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLC 401

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           K G +  A  L++EM++ G  PNV+TY  +++   ++   E      E  L   + SA  
Sbjct: 402 KEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLE------EAGLVLHEMSAR- 454

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE-ILCILGVFQKMHKL 639
                         G T N +I  +  L+            CR+E +   L +  +M   
Sbjct: 455 --------------GLTINSVI--YNCLICA---------LCRKEKVHVALNLLSEMCTK 489

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRL----FDNQVYG-VAHGLLMGYRDNIW 694
             KP++ T+++++    + +  ++A  L   + L     +N  Y  + H LL   R   +
Sbjct: 490 GCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALL---RRGAF 546

Query: 695 VQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ-KRGAQL 734
            +AL+L +++     +     YN L       G  ++G +L
Sbjct: 547 QKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLEL 587



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 123/260 (47%), Gaps = 21/260 (8%)

Query: 153 LCGA---DDYTFLLRELGNRGEWSKAI--QCFAFAVKREERKNDQGKLASAM-------- 199
           LC A   ++   +L E+  RG    ++   C   A+ R+E+ +    L S M        
Sbjct: 435 LCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPD 494

Query: 200 -------ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
                  I  L ++ ++D A  +F   L +G       ++ LI A  R G  Q+A+++ N
Sbjct: 495 LFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVN 554

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            M       + +TYN +I A  K G + +  +E+++ M+ +G+  D I+ N ++    + 
Sbjct: 555 DMLFRGCTLDKITYNGLIKAFCKVG-NIEKGLELYEQMIMDGLGADTISCNIMINGLCKV 613

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  + A     + ++RG   DI TYN++L+ +CK  ++  A  +   +  + + P+  TY
Sbjct: 614 GKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTY 673

Query: 373 STMIDGYAKAGRLDDALNMF 392
           +T I    K G ++DA + F
Sbjct: 674 NTFISWQCKEGMVNDACSFF 693



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 3/112 (2%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + MI+ L ++GKVD A      A+N G+   +  ++++++   + G  +EA+++F+ ++
Sbjct: 603 CNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQ 662

Query: 256 RYNLKPNLVTYNAVID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL 306
              ++P+  TYN  I   C +G V+       F   + NG  P  +T+N L+
Sbjct: 663 VEGVRPDAFTYNTFISWQCKEGMVN--DACSFFYRGIENGFVPSNLTWNVLV 712


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 234/495 (47%), Gaps = 27/495 (5%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           AF+AL++A+  +G   +A+  F+ M  +  +P    YN ++ A    GV     + +++ 
Sbjct: 139 AFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGV-ILLALALYNR 197

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M+  G  P+R T+N L+    + G+   A  +F+EM+ RGI  ++  Y  LL ++C   +
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A +++  M  K   P+ VTY+  + G  K GR+++A      ++  G  L    Y+ 
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSC 317

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    +  RF+E     K M    I  D V Y  ++ G  + G+ ++     + MK   
Sbjct: 318 LIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKG 377

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P+   Y+T++ V    G  + A  +  E  Q  L  D    + +I  LCK GLV+ A+
Sbjct: 378 FVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAM 437

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            + DEM + G  P V+TYN++ID F R    E       R L  + E  N  ++  +   
Sbjct: 438 QIFDEMGEHGCDPTVMTYNALIDGFYREGRLE-----EARMLFHKMEMGNNPSLFLRLTL 492

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
              +    D++ ++   +LV +    G        ++L    + + +    + P+VVT++
Sbjct: 493 GANQV--CDSESLR---KLVHDMCQSG--------QVLKAYKLLRSIIDSGVVPDVVTYN 539

Query: 650 AILNACSRCNSFEDASMLLEELRLF----DNQVYG-VAHGLLMGYRDNIWVQALSLFDEV 704
            ++N   +  + + A  L +EL+L     D   YG +  GLL  +R+N    A+ LF  +
Sbjct: 540 TLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREN---DAMMLFQNI 596

Query: 705 KLMDSSTASAFYNAL 719
               SS + + YN++
Sbjct: 597 LQSGSSPSLSIYNSM 611



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 179/379 (47%), Gaps = 49/379 (12%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           T + ++ ++ A   SG    A++++N M      PN  TYN ++D   K G+     +++
Sbjct: 171 TAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMA-GDALKM 229

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           FD+ML  G+ P+   +  LL+     G  + A  L   M  +G   D  TYN  L  +CK
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 347 GAQMDLAFE--IMAE---------------------------------MPAKNISPNVVT 371
             +++ AF+  +M +                                 M  +NISP+VV 
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+ MI G A+AGR++DAL+    MK  G   D   YNTVL +    G  E A  +  EM 
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML 409

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            + +  D+ T   ++ G  K+G  DE  ++F++M      P ++TY+ LID + + G  +
Sbjct: 410 QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 492 EAMQIFRE---------FKQAGLKADVVLYS----ALIDALCKNGLVESAVSLLDEMTKE 538
           EA  +F +         F +  L A+ V  S     L+  +C++G V  A  LL  +   
Sbjct: 470 EARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 539 GIRPNVVTYNSIIDAFGRS 557
           G+ P+VVTYN++I+   ++
Sbjct: 530 GVVPDVVTYNTLINGLCKA 548



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 199/420 (47%), Gaps = 32/420 (7%)

Query: 143 GDILKKFEFKL-----CGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA- 196
           GD LK F+  L          YT LL  L N G+  +A+Q             D+G L  
Sbjct: 224 GDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLG-------SMKDKGCLPD 276

Query: 197 ----SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
               +A +S L ++G+V+ A        + G+   +  +S LI    ++    E    + 
Sbjct: 277 EVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYK 336

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           +M   N+ P++V Y  +I  C + G   +  +   D M + G  PD   +N++L V    
Sbjct: 337 TMLERNISPDVVLYTIMIRGCAEAG-RIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDH 395

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  E A  L +EM+   +  D  T   ++  +CK   +D A +I  EM      P V+TY
Sbjct: 396 GDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTY 455

Query: 373 STMIDGYAKAGRLDDALNMFSEMK-------FLGIGL------DRVSYNTVLSIYAKLGR 419
           + +IDG+ + GRL++A  +F +M+       FL + L      D  S   ++    + G+
Sbjct: 456 NALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQ 515

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
             +A  + + +  SG+  D VTYN L+ G  K    D   R+F++++   +SP+ +TY T
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL-LDEMTKE 538
           LID   +     +AM +F+   Q+G    + +Y++++ +LC+   +  A++L LD + K+
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK 635



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 152/366 (41%), Gaps = 47/366 (12%)

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
           F+ +A+  A  +  +   ++ ++  ++ AGR  DA+  FS M           YNT+L  
Sbjct: 122 FDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKA 181

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
               G    AL +   M ++G   +  TYN L+ G  KQG   +  +MF++M    + PN
Sbjct: 182 LVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPN 241

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL- 532
           +  Y+ L+      G   EA+Q+    K  G   D V Y+A +  LCK G V  A   L 
Sbjct: 242 VKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLV 301

Query: 533 ---------------------------DE-------MTKEGIRPNVVTYNSIIDAFGRSA 558
                                      DE       M +  I P+VV Y  +I     + 
Sbjct: 302 MLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAG 361

Query: 559 TTECTVD--DVERDLGKQKES----ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
             E  +   DV +  G   ++      L  +C  D  D++ A    +++++    LV + 
Sbjct: 362 RIEDALSFLDVMKKKGFVPDTFCYNTVLKVLC--DHGDLERAHTLRSEMLQ--NNLVLDS 417

Query: 613 AGQGKKE-NRCRQEILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
             Q       C++ ++   + +F +M +    P V+T++A+++   R    E+A ML  +
Sbjct: 418 TTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHK 477

Query: 671 LRLFDN 676
           + + +N
Sbjct: 478 MEMGNN 483



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 124/288 (43%), Gaps = 32/288 (11%)

Query: 386 DDAL-NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           D+A+ +  ++ +  G+     ++  +++ ++  GR  +A+     M+    R  A  YN 
Sbjct: 118 DEAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNT 177

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           +L      G       ++ +M A   +PN  TY+ L+D   K G+  +A+++F E    G
Sbjct: 178 ILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRG 237

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           +  +V +Y+ L+ +LC  G ++ AV LL  M  +G  P+ VTYN+ +          C V
Sbjct: 238 IMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL-------CKV 290

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                  G+  E+     M       +   G +      + G   A +  +G        
Sbjct: 291 -------GRVNEAFQRLVMLQDGGFALGLKGYS----CLIDGLFQARRFDEG-------- 331

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                 G ++ M +  I P+VV ++ ++  C+     EDA   L+ ++
Sbjct: 332 -----FGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 183/352 (51%), Gaps = 11/352 (3%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
            +   L  G+   V  ++ LI+ + + G  ++A  +FN +++  L+P  V++N +I+   
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 275 KG-----GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
           K      G   K  +E       N + PD  T++ L+    + G  + A  LF+EM  RG
Sbjct: 270 KSRNLDEGFRLKKTME------ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG 323

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  +  T+  L+D  C+  ++D A     +M    + P++V Y+T+++G  K G ++ A 
Sbjct: 324 LRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKAR 383

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            +  EM+ +G+  D+++Y T++  Y K G  E A+ + K M   G+  D V + AL+ G+
Sbjct: 384 KLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGF 443

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            + G+  +  R   +M    + P+  TY+ +ID Y K G  K   ++ +E +  G K  V
Sbjct: 444 CRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGV 503

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + Y+ L++ LCK G +++A  LL+ M   G+ P+ +TYN +++   ++   E
Sbjct: 504 ITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE 555



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 184/361 (50%), Gaps = 3/361 (0%)

Query: 202 ILGRLGKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           ++ R GK D A ++F   L+  G   + + F AL+ AY  SG+  +AI  F  ++  N +
Sbjct: 127 LVSRKGK-DSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQ 185

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
                   ++D           +   + ++L  G  P    +N L+    + G    A+ 
Sbjct: 186 IPFHGCGYLLDKMINSNSPVT-IWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKL 244

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           +FNE+  RG+     ++NTL++ +CK   +D  F +   M    I P+V TYS +I G  
Sbjct: 245 IFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLC 304

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K GRLD A  +F EM+  G+  + +++  ++    +  R + A+    +M + G++ D V
Sbjct: 305 KEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLV 364

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
            YN LL G  K G  ++ R++ ++M+   + P+ +TY+TLID Y K G  + AM+I +  
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGM 424

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            + G+  D V ++ALI   C++G V  A   L EM + G++P+  TY  +ID + +    
Sbjct: 425 NEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNV 484

Query: 561 E 561
           +
Sbjct: 485 K 485



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 192/360 (53%), Gaps = 6/360 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+   + G +  AK IF      G   T  +F+ LI+   +S    E   +  +M+   
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           + P++ TY+ +I   C +G +D     ++FD+M + G++P+ ITF +L+    R    ++
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAE--QLFDEMQQRGLRPNGITFTALIDGQCRSRRIDS 346

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A N +++M+  G+  D+  YNTLL+ +CK   ++ A +++ EM    + P+ +TY+T+ID
Sbjct: 347 AMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLID 406

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GY K G L+ A+ +   M   G+ LD V++  ++S + + GR  +A    +EM  +G++ 
Sbjct: 407 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKP 466

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  TY  ++ GY K+G      ++ ++M+ +   P ++TY+ L++   K G  K A  + 
Sbjct: 467 DDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLL 526

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
                 G+  D + Y+ L++  CKNG  E  + L +E   +G+  +   Y S++  + +S
Sbjct: 527 EAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAYYTSLVSEYNKS 583



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 171/340 (50%), Gaps = 12/340 (3%)

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           LLD +         +   +E+      P V  Y+ +I+ + K G + DA  +F+E++  G
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           +    VS+NT+++   K    +E   + K ME + I  D  TY+ L+ G  K+G+ D   
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++F++M+   + PN +T++ LID   +      AM  + +    G+K D+V+Y+ L++ L
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
           CK G V  A  L+DEM   G++P+ +TY ++ID + +    E     +E   G  +E   
Sbjct: 374 CKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESA---MEIRKGMNEEGVV 430

Query: 580 LD-----AMCSQDDKD--VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILG 631
           LD     A+ S   +D  V++A RT  ++++  G    +       +  C++  +     
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEA-GMKPDDATYTMVIDGYCKKGNVKMGFK 489

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           + ++M     KP V+T++ ++N   +    ++A+MLLE +
Sbjct: 490 LLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAM 529



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 148/290 (51%), Gaps = 4/290 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L + G++D+A+ +F+     G       F+ALI    RS     A++ ++ M  
Sbjct: 297 SVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLT 356

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +KP+LV YN +++   K G D     ++ D+M   G++PD+IT+ +L+    + G  E
Sbjct: 357 MGVKPDLVMYNTLLNGLCKVG-DVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLE 415

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +A  +   M   G+  D   +  L+   C+  ++  A   + EM    + P+  TY+ +I
Sbjct: 416 SAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVI 475

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DGY K G +     +  EM+  G     ++YN +++   K G+ + A ++ + M + G+ 
Sbjct: 476 DGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVT 535

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            D +TYN LL G+ K GK +++ ++  + K   V  +   Y++L+  Y+K
Sbjct: 536 PDDITYNILLEGHCKNGKAEDLLKLRNE-KGLIV--DYAYYTSLVSEYNK 582



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 33/203 (16%)

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P +  Y+ LI+ + K G  ++A  IF E ++ GL+   V ++ LI+ LCK+  ++    L
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
              M +  I P+V TY+ +I    +         DV   L         D M        
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRL-----DVAEQL--------FDEM-------- 319

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKIKPNVVTFSA 650
           Q+ G   N I   F  L+         + +CR + I   +  + +M  + +KP++V ++ 
Sbjct: 320 QQRGLRPNGI--TFTALI---------DGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNT 368

Query: 651 ILNACSRCNSFEDASMLLEELRL 673
           +LN   +      A  L++E+R+
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMRM 391


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 181/356 (50%), Gaps = 3/356 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L   G V+L+  +       G    ++ F++LI  +   G   EA+  ++ M R
Sbjct: 285 TTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIR 344

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + PN+V YNA++   C K  +     V +F+ M  NG  P+  T+++L+   ++ G  
Sbjct: 345 EGVVPNVVAYNALMHGLCSKRSLG--DAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDL 402

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  ++N M+  G   ++  Y  ++D +C+ +  + A+ ++  M  +N  PN VT++T 
Sbjct: 403 DGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF 462

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G   +GR+D A+ +F +M   G   +  +YN +L    K  RF EA  + K+ME  GI
Sbjct: 463 IKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + VTYN ++ GY   G   E   +  +M      P+ +T + +ID Y K G    A+Q
Sbjct: 523 ELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQ 582

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +           D++ Y++LI  +C +  VE A+  L  M  EGI PNV T+N ++
Sbjct: 583 LMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 186/373 (49%), Gaps = 6/373 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS L +LGKV  A+   E A++  +  +V  ++ALI+   +    +EA  + + M  
Sbjct: 220 TTLISSLCKLGKVKEAR---ELAMS--FTPSVPVYNALINGVCKEYTFEEAFQLLDEMMN 274

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN+++Y  +I+A    G + +  + +   M   G  P+  TF SL+      G   
Sbjct: 275 KGIDPNVISYTTIINALSDAG-NVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSH 333

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A + ++ M+  G+  ++  YN L+  +C    +  A  +  +M      PNV TYS +I
Sbjct: 334 EALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALI 393

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DGYAKAG LD A  +++ M   G   + V+Y  ++ +  +   F +A  + + M+     
Sbjct: 394 DGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCP 453

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + VT+N  + G    G+ D   ++F+QM      PN  TY+ L+D   K   + EA  +
Sbjct: 454 PNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGL 513

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            ++ +  G++ ++V Y+ +I   C  G++  A+ LL +M   G +P+ +T N +IDA+ +
Sbjct: 514 VKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCK 573

Query: 557 SATTECTVDDVER 569
                  +  ++R
Sbjct: 574 QGKVNIAIQLMDR 586



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 187/393 (47%), Gaps = 31/393 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI  L    ++D  + + +    EG   +   F ++I +Y R+G  ++A+  F  M+ + 
Sbjct: 82  MIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFR 141

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           +KP +  YN ++DA       F+ +  I+ +M ++G++P+  T+N LL    +    + A
Sbjct: 142 VKPTVKIYNHILDALLDEN-RFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGA 200

Query: 319 RNLFNEMVHRGIDQD------------------------------IFTYNTLLDAICKGA 348
             L  EM  +G D D                              +  YN L++ +CK  
Sbjct: 201 HKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEY 260

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
             + AF+++ EM  K I PNV++Y+T+I+  + AG ++ +L + ++M   G   +  ++ 
Sbjct: 261 TFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFT 320

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           +++  +   G   EAL     M   G+  + V YNAL+ G   +    +   +F QM+ +
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEIN 380

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
              PN+ TYS LID Y+K G    A +++      G   +VV Y+ ++D LC+N +   A
Sbjct: 381 GCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQA 440

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             L++ M  E   PN VT+N+ I     S   +
Sbjct: 441 YCLIENMQVENCPPNTVTFNTFIKGLCGSGRVD 473



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/458 (24%), Positives = 194/458 (42%), Gaps = 55/458 (12%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +   M   G+      F S++    R G  E A   F  M    +   +  YN +LDA+ 
Sbjct: 98  LLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALL 157

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
              +  +   I + M    + PNV TY+ ++    K  R+D A  +  EM   G   D V
Sbjct: 158 DENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEV 217

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           SY T++S   KLG+ +EA    +E+  S        YNAL+ G  K+  ++E  ++ ++M
Sbjct: 218 SYTTLISSLCKLGKVKEA----RELAMS-FTPSVPVYNALINGVCKEYTFEEAFQLLDEM 272

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
               + PN+++Y+T+I+  S  G  + ++ +  +    G   ++  +++LI      G  
Sbjct: 273 MNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGS 332

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
             A+   D M +EG+ PNVV YN+++          C+    +R LG        DA+  
Sbjct: 333 HEALDFWDRMIREGVVPNVVAYNALMHGL-------CS----KRSLG--------DAVSV 373

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
            +  ++   G   N  ++ +  L+   A  G  +            V+  M      PNV
Sbjct: 374 FNQMEIN--GCCPN--VRTYSALIDGYAKAGDLDGASE--------VWNWMITHGCHPNV 421

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRL---------FDNQVYGVAHGLLMGYRDNIWVQ 696
           V ++ +++   R + F  A  L+E +++         F+  + G     L G     W  
Sbjct: 422 VAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKG-----LCGSGRVDW-- 474

Query: 697 ALSLFDEVKLMDSSTASAFYNALTDMLW---HFGQKRG 731
           A+ +FD++        +  YN L D L     FG+  G
Sbjct: 475 AIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFG 512



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 177/403 (43%), Gaps = 17/403 (4%)

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TY  +++ +    +MD    ++ +M  + IS +   + ++I  Y +AG  + AL  F  
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M+   +      YN +L       RF+    +   M+  G+  +  TYN LL    K  +
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            D   ++  +M +    P+ ++Y+TLI    K G  KEA ++   F  +     V +Y+A
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPS-----VPVYNA 251

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           LI+ +CK    E A  LLDEM  +GI PNV++Y +II+A   +   E ++  + +   + 
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC------ 628
             S NL    S       + G   ++ +  + +++ E               LC      
Sbjct: 312 C-SPNLHTFTSLIKGFFLKGG--SHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLG 368

Query: 629 -ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM 687
             + VF +M      PNV T+SA+++  ++    + AS +   +         VA+  ++
Sbjct: 369 DAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMV 428

Query: 688 GY--RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
               R++++ QA  L + +++ +    +  +N     L   G+
Sbjct: 429 DVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 196/390 (50%), Gaps = 39/390 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++S L    +VDLA+  F+ AL       ++ F+ +IS   ++G  ++A  V   ++ + 
Sbjct: 156 LLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWG 215

Query: 259 LKPNLVTYNAVIDA-CGKGGVD-FKHVVEIFDDMLRNGVQPDRITFNSLL---------- 306
           L P++VTYN +ID  C +G      HV  +  +M+  G+ P+ +TFN L+          
Sbjct: 216 LAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTA 275

Query: 307 --------------------------AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
                                      +CS G + E  + L +EM   G+  ++ T N++
Sbjct: 276 AAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVK-LVDEMKDLGLVPNLATLNSV 334

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           L+  CK   M  A   +  M  KN+ PNVVTY+ ++DGY +  ++ DAL +   M   G+
Sbjct: 335 LNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGV 394

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             +   YN +++ + + G +     +  EM   G+R D VTYN L+G    +G+  +  +
Sbjct: 395 RPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVK 454

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + ++M    + P  LTY+T+I+ Y + G  K A +I    ++   +A+VV Y+  I  LC
Sbjct: 455 LLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLC 514

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           + G +E    LL+EM ++G+ PN VTY++I
Sbjct: 515 RMGKMEETNELLNEMLEKGLVPNGVTYDTI 544



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 180/357 (50%), Gaps = 5/357 (1%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           + ++ + L+SA   +     A   F +  R  + P+L T+N VI    K G   +   ++
Sbjct: 149 SAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTG-QLRKAGDV 207

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRG--GLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
             D+   G+ P  +T+N+++   C RG  G       L  EMV  GI  +  T+N L++ 
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            CK +    A  +  EM  + I+ +VVTYS ++ G    G++++ + +  EMK LG+  +
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             + N+VL+ + K G   +A      ME   ++ + VTY  L+ GY +  K  +   + E
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKE 387

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
            M    V PN   Y+ LI  +++ G ++    +  E +  G++AD+V Y+ LI ALC  G
Sbjct: 388 AMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKG 447

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
            V  AV LLDEM   G+ P  +TYN+II+ +      + +  ++   + K K+ AN+
Sbjct: 448 EVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIK-SAYEIRTRMEKGKKRANV 503



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 147/286 (51%), Gaps = 8/286 (2%)

Query: 180 AFAVKREERKNDQGKLAS-----AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSAL 234
           A AV+  E    QG  AS     A++  L   GKV+    + +   + G    +   +++
Sbjct: 275 AAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSV 334

Query: 235 ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD-FKHVVEIFDDMLRN 293
           ++ + + G   +A    +SM++ N+KPN+VTY  ++D  G   +D  K  + + + M   
Sbjct: 335 LNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVD--GYRRLDKMKDALAVKEAMSGK 392

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           GV+P+   +N L+A  +R G W +   L +EM  +G+  DI TYN L+ A+C   ++  A
Sbjct: 393 GVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKA 452

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
            +++ EM    + P  +TY+T+I+GY + G +  A  + + M+      + V+YN  +  
Sbjct: 453 VKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKC 512

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
             ++G+ EE   +  EM   G+  + VTY+ +  G  ++G   +VR
Sbjct: 513 LCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPDVR 558



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 152/322 (47%), Gaps = 27/322 (8%)

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P+  + + ++     A R+D A   F       +  D  ++N V+S   K G+  +A  V
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 427 CKEMESSGIRKDAVTYNALLGGY---GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
            K++ + G+    VTYN ++ GY   G+ G+   V  + ++M    +SPN +T++ L++ 
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y K      A+++F E KQ G+ A VV YSAL+  LC  G VE  V L+DEM   G+ PN
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327

Query: 544 VVTYNSIIDAF---GRSATTECTVDDVERDLGKQKESA---------NLDAMCSQDDKDV 591
           + T NS+++ F   G     E  +D +E+   K               LD M  +D   V
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKM--KDALAV 385

Query: 592 QEA--GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
           +EA  G+      +++  L+A     G   +        + G+  +M    ++ ++VT++
Sbjct: 386 KEAMSGKGVRPNARIYNCLIAGFTRNGDWRS--------VSGLLDEMRMKGVRADIVTYN 437

Query: 650 AILNACSRCNSFEDASMLLEEL 671
            ++ A         A  LL+E+
Sbjct: 438 VLIGALCVKGEVRKAVKLLDEM 459



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 31/178 (17%)

Query: 498 REFKQA---GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           R FK A    +  D+  ++ +I  LCK G +  A  +  ++   G+ P+VVTYN+IID +
Sbjct: 171 RAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGY 230

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            +               G+     ++DA+     K++ EAG + N++   F  LV    G
Sbjct: 231 CKR--------------GRAGRMYHVDALL----KEMVEAGISPNEV--TFNVLVN---G 267

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             K  N         + VF++M +  I  +VVT+SA++         E+   L++E++
Sbjct: 268 YCKDSNTA-----AAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMK 320


>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39980, chloroplastic; Flags: Precursor
 gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 678

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/543 (24%), Positives = 256/543 (47%), Gaps = 43/543 (7%)

Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFETA 219
           F++  L    +W +++    +    EE K      A + ++  + R  + D+A  +F+  
Sbjct: 124 FMVSLLSRENDWQRSLALLDWV--HEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEM 181

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
                    Y +S LI+++G+ G    A+S    M++  +  +LV Y+ +I+   +   D
Sbjct: 182 RQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE-LSRRLCD 240

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
           +   + IF  + R+G+ PD + +NS++ V  +  L+  AR L  EM   G+  +  +Y+T
Sbjct: 241 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYST 300

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           LL    +  +   A  + AEM   N + ++ T + MID Y +   + +A  +F  ++ + 
Sbjct: 301 LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD 360

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I  + VSYNT+L +Y +   F EA+ + + M+   I ++ VTYN ++  YGK  ++++  
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            + ++M++  + PN +TYST+I ++ K G    A  +F++ + +G++ D VLY  +I A 
Sbjct: 421 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 480

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
            + GL+  A  LL E+      P+ +   + I    ++  TE            +     
Sbjct: 481 ERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTE------------EATWVF 524

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
             A  S + KD           I VFG ++   +          Q  + ++ VF+KM   
Sbjct: 525 RQAFESGEVKD-----------ISVFGCMINLYSRN--------QRYVNVIEVFEKMRTA 565

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWV 695
              P+    + +LNA  +   FE A  +  E++    +F ++V+     L    +D   V
Sbjct: 566 GYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMV 625

Query: 696 QAL 698
           ++L
Sbjct: 626 ESL 628



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 206/416 (49%), Gaps = 38/416 (9%)

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHR--GIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           +++   ++++ SR   W+ +  L +  VH        +F YN +L  + +  Q D+A  +
Sbjct: 119 QLSIRFMVSLLSRENDWQRSLALLD-WVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGL 177

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
             EM  + ++P+  TYST+I  + K G  D AL+   +M+   +  D V Y+ ++ +  +
Sbjct: 178 FDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRR 237

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
           L  + +A+ +   ++ SGI  D V YN+++  YGK   + E R + ++M    V PN ++
Sbjct: 238 LCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVS 297

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           YSTL+ VY +   + EA+ +F E K+     D+   + +ID   +  +V+ A  L   + 
Sbjct: 298 YSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLR 357

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
           K  I PNVV+YN+I+  +G +              G   E+ +L  +  +  KD+++   
Sbjct: 358 KMDIEPNVVSYNTILRVYGEAEL-----------FG---EAIHLFRLMQR--KDIEQNVV 401

Query: 597 TDNQIIKVFGQLVA-EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
           T N +IK++G+ +  EKA                  + Q+M    I+PN +T+S I++  
Sbjct: 402 TYNTMIKIYGKTMEHEKAT----------------NLVQEMQSRGIEPNAITYSTIISIW 445

Query: 656 SRCNSFEDASMLLEELRLFDNQVYGVAH-GLLMGY-RDNIWVQALSLFDEVKLMDS 709
            +    + A+ L ++LR    ++  V +  +++ Y R  +   A  L  E+KL D+
Sbjct: 446 GKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDN 501



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/342 (21%), Positives = 157/342 (45%), Gaps = 40/342 (11%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI + G+L  V  A  +F +         V +++ ++  YG +    EAI +F  M+R +
Sbjct: 336 MIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD 395

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           ++ N+VTYN +I   GK  ++ +    +  +M   G++P+ IT+++++++  + G  + A
Sbjct: 396 IEQNVVTYNTMIKIYGKT-MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRA 454

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP----------- 367
             LF ++   G++ D   Y T++ A  +   M  A  ++ E+   +  P           
Sbjct: 455 ATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKA 514

Query: 368 --------------------NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
                               ++  +  MI+ Y++  R  + + +F +M+  G   D    
Sbjct: 515 GRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVI 574

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSG-IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
             VL+ Y K   FE+A  V +EM+  G +  D V +  +L  Y  +  ++ V  +F++++
Sbjct: 575 AMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFQRLE 633

Query: 467 ADCVSPNLLT---YSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +D   PN+ +   +  +  +Y +     +A ++    ++ G+
Sbjct: 634 SD---PNVNSKELHLVVAALYERADKLNDASRVMNRMRERGI 672


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 234/489 (47%), Gaps = 46/489 (9%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V A++ +I  + + G   +A  +F  M +  + P+LVTY++V+ A C    +D       
Sbjct: 221 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEA--F 278

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M+  GV PD  T+N+L+   S  G W+ A  +F EM  + I  D+   NTL+ ++CK
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A ++   M  K  +P+V +Y+ M++GYA  G L D  ++F  M   GI  D  +
Sbjct: 339 YGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 398

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +N ++  YA  G  ++A+++  EM   G++   VTY  ++    + GK D+    F QM 
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V P+   Y  LI  +   G   +A ++  E    G++ D+V + ++I+ LCK G V 
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVM 518

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A ++ D     G+ P+ V YN ++D +       C V  +E+ L         DAM S 
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGY-------CLVGKMEKAL------RVFDAMVS- 564

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
                  AG   N +   +G LV      G+ +          L +F++M +  IKP+ +
Sbjct: 565 -------AGIEPNVV--GYGTLVNGYCKIGRIDEG--------LSLFREMLQKGIKPSTI 607

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG------LLMG-YRDNIWVQALS 699
            ++ I++       FE    +  +++  +    G+A        +L G +++  + +A+ 
Sbjct: 608 LYNIIIDGL-----FEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 662

Query: 700 LFDEVKLMD 708
           LF E++ M+
Sbjct: 663 LFKELRAMN 671



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 229/507 (45%), Gaps = 87/507 (17%)

Query: 118 STRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSKA 175
           S  H++    A+    AF R  V+ G +           D++T+  L+    + G+W +A
Sbjct: 261 SVVHALCKARAMDKAEAFLRQMVNKGVL----------PDNWTYNNLIYGYSSTGQWKEA 310

Query: 176 IQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET----------------- 218
           ++ F   ++R+    D   L + M S L + GK+  A+++F+T                 
Sbjct: 311 VRVFK-EMRRQSILPDVVALNTLMGS-LCKYGKIKEARDVFDTMAMKGQNPDVFSYTIML 368

Query: 219 ------------------ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
                              L +G    +Y F+ LI AY   G   +A+ +FN M+ + +K
Sbjct: 369 NGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 428

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA- 317
           P++VTY  VI A C  G +D    +E F+ M+  GV PD+  ++ L+   C+ G L +A 
Sbjct: 429 PHVVTYMTVIAALCRIGKMD--DAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAK 486

Query: 318 ---------------------------------ARNLFNEMVHRGIDQDIFTYNTLLDAI 344
                                            A+N+F+  V+ G+  D   YN L+D  
Sbjct: 487 ELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGY 546

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C   +M+ A  +   M +  I PNVV Y T+++GY K GR+D+ L++F EM   GI    
Sbjct: 547 CLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPST 606

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           + YN ++    + GR   A +   EM  SGI  +  TY+ +L G  K   +DE   +F++
Sbjct: 607 ILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE 666

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           ++A  V  +++T +T+I    +    +EA  +F    ++GL    V YS +I  L K GL
Sbjct: 667 LRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGL 726

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSII 551
           VE A  +   M   G  P+    N ++
Sbjct: 727 VEEAEDMFSSMQNAGCEPDSRLLNHVV 753



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 193/389 (49%), Gaps = 34/389 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S+++  L +   +D A+      +N+G     + ++ LI  Y  +G  +EA+ VF  M+R
Sbjct: 260 SSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 319

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVD------------------FKHVV------------- 284
            ++ P++V  N ++ + C  G +                   F + +             
Sbjct: 320 QSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVD 379

Query: 285 --EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             ++FD ML +G+ PD  TFN L+   +  G+ + A  +FNEM   G+   + TY T++ 
Sbjct: 380 MTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIA 439

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A+C+  +MD A E   +M  + + P+   Y  +I G+   G L  A  + SE+   G+ L
Sbjct: 440 ALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRL 499

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D V + ++++   KLGR  +A  +     + G+  DAV YN L+ GY   GK ++  R+F
Sbjct: 500 DIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF 559

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           + M +  + PN++ Y TL++ Y K G   E + +FRE  Q G+K   +LY+ +ID L + 
Sbjct: 560 DAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 619

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           G    A     EMT+ GI  N  TY+ ++
Sbjct: 620 GRTVPAKVKFHEMTESGIAMNKCTYSIVL 648



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 244/522 (46%), Gaps = 62/522 (11%)

Query: 233 ALISAYGRSGYCQ-----EAISVF-NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           A+I+++   G+C+     EA+ +  +        P++ +YN ++ +    G   +     
Sbjct: 148 AIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQA---- 203

Query: 287 FDDMLRNGVQ------PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
            DD+LR   +      PD + +N+++    + G    A +LF EMV RGI  D+ TY+++
Sbjct: 204 -DDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSV 262

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           + A+CK   MD A   + +M  K + P+  TY+ +I GY+  G+  +A+ +F EM+   I
Sbjct: 263 VHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSI 322

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D V+ NT++    K G+ +EA  V   M   G   D  +Y  +L GY  +G   ++  
Sbjct: 323 LPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTD 382

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F+ M  D ++P++ T++ LI  Y+  G+  +AM IF E +  G+K  VV Y  +I ALC
Sbjct: 383 LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALC 442

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           + G ++ A+   ++M  +G+ P+   Y+ +I  F       CT       L K KE  + 
Sbjct: 443 RIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF-------CT----HGSLLKAKELIS- 490

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
                   + +    R D   I  FG ++      G+        ++    +F     + 
Sbjct: 491 --------EIMNNGMRLD---IVFFGSIINNLCKLGR--------VMDAQNIFDLTVNVG 531

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG------VAHGLLM-GY-RDN 692
           + P+ V ++ +++        E A      LR+FD  V        V +G L+ GY +  
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKA------LRVFDAMVSAGIEPNVVGYGTLVNGYCKIG 585

Query: 693 IWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
              + LSLF E+       ++  YN + D L+  G+   A++
Sbjct: 586 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 192/405 (47%), Gaps = 5/405 (1%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           D YTF  L++   N G   KA+    F   R+            +I+ L R+GK+D A  
Sbjct: 395 DIYTFNVLIKAYANCGMLDKAM--IIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 452

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
            F   +++G     YA+  LI  +   G   +A  + + +    ++ ++V + ++I+   
Sbjct: 453 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 512

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K G        IFD  +  G+ PD + +N L+      G  E A  +F+ MV  GI+ ++
Sbjct: 513 KLG-RVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 571

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
             Y TL++  CK  ++D    +  EM  K I P+ + Y+ +IDG  +AGR   A   F E
Sbjct: 572 VGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 631

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   GI +++ +Y+ VL    K   F+EA+ + KE+ +  ++ D +T N ++ G  +  +
Sbjct: 632 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 691

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            +E + +F  +    + P  +TYS +I    K GL +EA  +F   + AG + D  L + 
Sbjct: 692 VEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 751

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
           ++  L K   +  A + L ++ +       +T   ++D F    T
Sbjct: 752 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGT 796


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 149/624 (23%), Positives = 279/624 (44%), Gaps = 62/624 (9%)

Query: 49  SLTKPPLSPSPRNA-PKPAATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRR---STRF 104
           SL  PP  P  + A P+P+A S + AP P P        ++ S+ AP   G R   S   
Sbjct: 4   SLLPPPTVPVSKTAKPRPSALSVS-APAPSP--------AATSDDAPGGGGPRRRLSALI 54

Query: 105 VSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKL---CGADDYTF 161
            S    GR   A     +      +    A        G +              + YT+
Sbjct: 55  RSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLAAARRLAASVPVAPNAYTY 114

Query: 162 --LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIFE 217
             L+R L  RG  + A+       +R           +  A     G  G V + +++  
Sbjct: 115 FPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHG 174

Query: 218 --TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVTYNAVIDACG 274
              AL+ G  N V      + A    G   EA+ +   +   +  +P++V+YNAV+    
Sbjct: 175 RGCALDVGNCNLV------LQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLC 228

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
                + HV ++ ++M+  G  P+ +TF++L+    R GL+E    +  +M   G   D+
Sbjct: 229 MAR-RWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDV 287

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
             Y T++D +CK  ++++A  I+  MP+  +SPNVV Y+T++ G   A R ++A  + +E
Sbjct: 288 RMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAE 347

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M      LD V++N ++    + G  +  + V ++M   G   D +TY  ++ G+ K+G 
Sbjct: 348 MFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGL 407

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            DE   +   M A    PN ++Y+ ++        + +A ++  +  Q G   + V ++ 
Sbjct: 408 IDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNT 467

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           LI+ LCK GLVE A+ LL +M   G  P++++Y+++ID  G++  T+           + 
Sbjct: 468 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTD-----------EA 516

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
            E  N+          + + G + N II  +  + +  +G+G+           ++ +F+
Sbjct: 517 LELLNV----------MVKKGMSPNTII--YSSIASALSGEGRINK--------VIQMFE 556

Query: 635 KMHKLKIKPNVVTFSAILNA-CSR 657
            +    ++ + V ++A++++ C R
Sbjct: 557 NIQDTTVRSDAVLYNAVISSLCKR 580



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 169/356 (47%), Gaps = 3/356 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L R G  +    +       G    V  ++ +I    +    + A  + N M  
Sbjct: 256 STLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPS 315

Query: 257 YNLKPNLVTYNAVIDACGKGGVD-FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           Y L PN+V YN ++   G    D ++    +  +M       D +TFN L+    + GL 
Sbjct: 316 YGLSPNVVCYNTLLK--GLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLV 373

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +    +  +M+  G   D+ TY T+++  CK   +D A  ++  M A    PN V+Y+ +
Sbjct: 374 DRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIV 433

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G   A R  DA  + S+M   G   + V++NT+++   K G  E+A+ + K+M  +G 
Sbjct: 434 LKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 493

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D ++Y+ ++ G GK G  DE   +   M    +SPN + YS++    S  G   + +Q
Sbjct: 494 SPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQ 553

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +F   +   +++D VLY+A+I +LCK G  + A+  L  M   G  PN  TY  +I
Sbjct: 554 MFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILI 609



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 171/353 (48%), Gaps = 9/353 (2%)

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
           +++ E  +  G    +  FS LI    R+G  +    V   M  +   P++  Y  +ID 
Sbjct: 237 QDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIID- 295

Query: 273 CGKGGVDFKHVVE----IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
               GV  +  +E    I + M   G+ P+ + +N+LL        WE A  L  EM  +
Sbjct: 296 ----GVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDK 351

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
               D  T+N L+D +C+   +D   E++ +M      P+V+TY+T+I+G+ K G +D+A
Sbjct: 352 DCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEA 411

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           + +   M   G   + VSY  VL       R+ +A  +  +M   G   + VT+N L+  
Sbjct: 412 VMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINF 471

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             K+G  ++   + +QM  +  SP+L++YST+ID   K G   EA+++     + G+  +
Sbjct: 472 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPN 531

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            ++YS++  AL   G +   + + + +    +R + V YN++I +  +   T+
Sbjct: 532 TIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETD 584



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 140/275 (50%), Gaps = 3/275 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           F+ L+    ++G     I V   M  +   P+++TY  VI+  C +G +D    V +   
Sbjct: 360 FNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLID--EAVMLLRS 417

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G +P+ +++  +L        W  A  L ++M+ +G   +  T+NTL++ +CK   
Sbjct: 418 MAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 477

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++ A E++ +M     SP++++YST+IDG  KAG  D+AL + + M   G+  + + Y++
Sbjct: 478 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSS 537

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           + S  +  GR  + + + + ++ + +R DAV YNA++    K+G+ D        M +  
Sbjct: 538 IASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSG 597

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
             PN  TY+ LI   +  G  KEA +I  E    G
Sbjct: 598 CVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 160/333 (48%), Gaps = 3/333 (0%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           ++++A+ I     + G    V  ++ L+     +   +EA  +   M   +   + VT+N
Sbjct: 302 RLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFN 361

Query: 268 AVID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
            ++D  C  G VD   V+E+ + ML +G  PD IT+ +++    + GL + A  L   M 
Sbjct: 362 ILVDFLCQNGLVD--RVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMA 419

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G   +  +Y  +L  +C   +   A E+M++M  +   PN VT++T+I+   K G ++
Sbjct: 420 ACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 479

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            A+ +  +M   G   D +SY+TV+    K G  +EAL +   M   G+  + + Y+++ 
Sbjct: 480 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIA 539

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
                +G+ ++V +MFE ++   V  + + Y+ +I    K G    A++       +G  
Sbjct: 540 SALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCV 599

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
            +   Y+ LI  L   G V+ A  +L E+  +G
Sbjct: 600 PNESTYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score = 42.7 bits (99), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 98/261 (37%), Gaps = 48/261 (18%)

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           Y  L+ ALC  G +  A+++LD+M + G  P    Y+  ++A  R++     V  V RDL
Sbjct: 114 YFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV-GVLRDL 172

Query: 572 ---GKQKESAN----LDAMCSQDDKDVQEAGRTDNQIIKVFG------------------ 606
              G   +  N    L A+C Q   D  EA R    ++  FG                  
Sbjct: 173 HGRGCALDVGNCNLVLQAVCDQGPVD--EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMA 230

Query: 607 -------QLVAEKAGQGKKENRCRQEI----LCILGVFQKMHKLKIK-------PNVVTF 648
                   L+ E    G   N          LC  G+F+++H++  +       P+V  +
Sbjct: 231 RRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMY 290

Query: 649 SAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKL 706
           + I++   +    E A  +L  +  +      V +  L+      + W +A  L  E+  
Sbjct: 291 ATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFD 350

Query: 707 MDSSTASAFYNALTDMLWHFG 727
            D       +N L D L   G
Sbjct: 351 KDCPLDDVTFNILVDFLCQNG 371


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 184/358 (51%), Gaps = 8/358 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A ++F+  + EG+   V  +  LI+   + G    AI +  SM + N +PN+  Y
Sbjct: 112 GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY 171

Query: 267 NAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           N +ID+  K     + V E   +F +M+  G+ PD  T+NSL+        W+    L N
Sbjct: 172 NTIIDSLCKD----RQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLN 227

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN-ISPNVVTYSTMIDGYAKA 382
           EMV   I  D+ ++NT++DA+CK  ++  A +++ +M  +    PNV++Y+T+I+GY K 
Sbjct: 228 EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKI 287

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
            R+D A+ +F EM    +  D V+Y+T++     + R ++A+ +  EM +     + VTY
Sbjct: 288 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 347

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             LL    K     E   + + ++   + P++   +  ID   + G  + A  +F     
Sbjct: 348 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 407

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            GL+ DV  YS +I+ LC+ GL++ A  L  EM + G   N   YN+I   F R+  T
Sbjct: 408 KGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNET 465



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 232/492 (47%), Gaps = 57/492 (11%)

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH---VVEIFDDMLRNGVQPDRITFN 303
           AIS FN M R    P+ V +N ++ +  K     KH   ++ +   M   G+ P+  T +
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAK----MKHHSTLLSLSHQMDSFGIPPNIYTLH 100

Query: 304 SLL-AVC--SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
            L+ + C  +RG + EA  +LF++M+  G   D+ TY TL++ +CK      A  ++  M
Sbjct: 101 ILINSFCHLNRGKIGEAL-HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM 159

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
             KN  PNV  Y+T+ID   K  ++ +A N+FSEM   GI  D  +YN+++     L  +
Sbjct: 160 VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEW 219

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM--KADCVSPNLLTYS 478
           +    +  EM  S I  D V++N ++    K+GK  E   + ++M  +  C+ PN+++Y+
Sbjct: 220 KHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCM-PNVISYN 278

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           TLI+ Y K     +AM +F E  +  L  D V YS LI  LC    ++ A++L  EM   
Sbjct: 279 TLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVAC 338

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
              PN+VTY  ++D   ++      +      L K  E +NLD        D+Q      
Sbjct: 339 SQIPNLVTYRILLDYLCKNRYLAEAM-----ALLKAIEGSNLDP-------DIQVNNIAI 386

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
           + + +  G+L A +                   +F  +    ++P+V T+S ++N   R 
Sbjct: 387 DGMCRA-GELEAAR------------------DLFSNLSSKGLQPDVWTYSIMINGLCRR 427

Query: 659 NSFEDASMLLEELR----LFDNQVYG-VAHGLLMGYRDNIWVQALSLFDEVKL----MDS 709
              ++AS L  E+       +  +Y  +  G L   R+N   +A+ L  E+       D+
Sbjct: 428 GLLDEASKLFREMDENGCTLNGCIYNTITRGFL---RNNETSRAIQLLQEMVARGFSADA 484

Query: 710 STASAFYNALTD 721
           ST + F   L+D
Sbjct: 485 STMTLFVKMLSD 496



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 185/397 (46%), Gaps = 8/397 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   G  S AI+     V++  + N      + +I  L +  +V  A N+F  
Sbjct: 136 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA--YNTIIDSLCKDRQVTEAFNLFSE 193

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            + +G    ++ +++LI A       +   ++ N M    + P++V++N V+DA C +G 
Sbjct: 194 MVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGK 253

Query: 278 VDFKHVVEIFDDML-RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           V   H  ++ D M+ R G  P+ I++N+L+    +    + A  LF EM  + +  D  T
Sbjct: 254 VTEAH--DVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVT 311

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y+TL+  +C   ++  A  +  EM A +  PN+VTY  ++D   K   L +A+ +   ++
Sbjct: 312 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 371

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
              +  D    N  +    + G  E A  +   + S G++ D  TY+ ++ G  ++G  D
Sbjct: 372 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 431

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E  ++F +M  +  + N   Y+T+   + +      A+Q+ +E    G  AD    +  +
Sbjct: 432 EASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFV 491

Query: 517 DALCKNGLVESAVSLLDEMTKEG--IRPNVVTYNSII 551
             L  +GL +S   +L +  K+   I  NV+    II
Sbjct: 492 KMLSDDGLDQSLKQILRDFCKQKSWIYENVMVLQEII 528



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/404 (23%), Positives = 173/404 (42%), Gaps = 41/404 (10%)

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL--GRFEEAL 424
           P+ V ++ ++   AK       L++  +M   GI  +  + + +++ +  L  G+  EAL
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +  +M   G R D VTY  L+ G  K G      R+   M      PN+  Y+T+ID  
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 178

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            K     EA  +F E    G+  D+  Y++LI ALC     +   +LL+EM    I P+V
Sbjct: 179 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 238

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
           V++N+++DA  +               GK  E+ ++       DK +Q  G   N I   
Sbjct: 239 VSFNTVVDALCKE--------------GKVTEAHDV------VDKMIQRGGCMPNVI--S 276

Query: 605 FGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           +  L+            C+ Q I   + +F +M + ++ P+ VT+S +++        +D
Sbjct: 277 YNTLI---------NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQD 327

Query: 664 ASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
           A  L  E+         V + +L+ Y  ++    +A++L   ++  +        N   D
Sbjct: 328 AIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 387

Query: 722 MLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAAR 765
            +   G+   A+ +      + +  +VW+ S     +M +G  R
Sbjct: 388 GMCRAGELEAARDLFSNLSSKGLQPDVWTYS-----IMINGLCR 426


>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 209/422 (49%), Gaps = 13/422 (3%)

Query: 147 KKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRL 206
           +KFEF       +  + R   + G + + ++ F + VK+    +++  +   + +   R 
Sbjct: 129 EKFEF---WEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRR- 184

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
            ++DL    F   ++ G   TVY+ + ++    R G  +++  +        +KP   TY
Sbjct: 185 -RIDLCLEFFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTY 243

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N +I+A  K   DF  V +I   M ++GV  +++T+  L+ +  + G       LF+EM 
Sbjct: 244 NTIINAYLKHR-DFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMR 302

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            RGI+ DI  Y +L+   C+   +  AF +  E+  K + P+  TY  +IDG  K G + 
Sbjct: 303 ERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMG 362

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            A  + +EM+  G+ + +V +NT+++ Y + G  +EA ++   ME  G + D  T N + 
Sbjct: 363 AAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIA 422

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
             + +  +YDE ++   +M    V  + ++Y+ LIDVY K G  +EA ++F E     ++
Sbjct: 423 SCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQ 482

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            + + Y+ +I A CK G V+ A  L   M   G+ P+  TY S+I         EC  D+
Sbjct: 483 PNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHG-------ECIADN 535

Query: 567 VE 568
           V+
Sbjct: 536 VD 537



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 166/323 (51%), Gaps = 1/323 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I +  + GK++  + +F+     G  + ++ +++LIS   R G  + A  +F+ +  
Sbjct: 279 TLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTE 338

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P+  TY A+ID   K G +      + ++M   GV   ++ FN+L+    R G+ +
Sbjct: 339 KGLLPSSHTYGALIDGVCKVG-EMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMID 397

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +++ M  +G   D+FT NT+     +  + D A + +  M    +  + V+Y+ +I
Sbjct: 398 EASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLI 457

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y K G +++A  +F EM    +  + ++YN ++  Y K G+ +EA  +   M+++G+ 
Sbjct: 458 DVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMD 517

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D+ TY +L+ G       DE  R+F +M    +  N +TY+ +I   SK G   EA  +
Sbjct: 518 PDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGL 577

Query: 497 FREFKQAGLKADVVLYSALIDAL 519
           + E K+ G   D  +Y+ALI ++
Sbjct: 578 YDEIKRKGYTIDNKVYTALIGSM 600



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 103/479 (21%), Positives = 193/479 (40%), Gaps = 105/479 (21%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
           F+  + +FD M++ G+  D  +    L    +    +     F  MV  G+   +++   
Sbjct: 151 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKITVYSLTI 210

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY-------------------- 379
           +++ +C+  +++ + +++ E   K I P   TY+T+I+ Y                    
Sbjct: 211 VVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDG 270

Query: 380 ---------------AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
                           K G+++D   +F EM+  GI  D   Y +++S   + G  + A 
Sbjct: 271 VVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAF 330

Query: 425 L-----------------------VCK------------EMESSGIRKDAVTYNALLGGY 449
           L                       VCK            EM+S G+    V +N L+ GY
Sbjct: 331 LLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGY 390

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            ++G  DE   +++ M+      ++ T +T+   +++   Y EA Q      + G++   
Sbjct: 391 CRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLST 450

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           V Y+ LID  CK G VE A  L  EM+ + ++PN +TYN +I A+ +             
Sbjct: 451 VSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQ------------ 498

Query: 570 DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI 629
             GK KE+  L A    +  D      T      + G+ +A+   +  +           
Sbjct: 499 --GKVKEARKLWANMKANGMDPDSYTYTS----LIHGECIADNVDEAMR----------- 541

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHG 684
             +F +M    +  N VT++ +++  S+    ++A  L +E++      DN+VY    G
Sbjct: 542 --LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALIG 598



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/458 (23%), Positives = 206/458 (44%), Gaps = 28/458 (6%)

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           F+ +  V    G++E    +F+ MV +G+  D  +    L A  K  ++DL  E    M 
Sbjct: 138 FDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMV 197

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
              +   V + + +++G  + G ++ +  +  E    GI  +  +YNT+++ Y K   F 
Sbjct: 198 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFS 257

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
               + K M+  G+  + VTY  L+    K GK ++V ++F++M+   +  ++  Y++LI
Sbjct: 258 GVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLI 317

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
               + G  K A  +F E  + GL      Y ALID +CK G + +A  L++EM  +G+ 
Sbjct: 318 SWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 377

Query: 542 PNVVTYNSIIDAFGRSATTE--CTVDDVERDLGKQKE--SANLDAMCSQDDKDVQEAGRT 597
              V +N++I+ + R    +    + DV    G Q +  + N  A C    K   EA + 
Sbjct: 378 ITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQW 437

Query: 598 DNQIIK--------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
             ++++         +  L+     +G  E   R        +F +M   +++PN +T++
Sbjct: 438 LFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKR--------LFVEMSSKEVQPNAITYN 489

Query: 650 AILNACSRCNSFEDASMLLEELRLF----DNQVY-GVAHGLLMGYRDNIWVQALSLFDEV 704
            ++ A  +    ++A  L   ++      D+  Y  + HG  +   DN+  +A+ LF E+
Sbjct: 490 VMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIA--DNV-DEAMRLFSEM 546

Query: 705 KLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
            L      S  Y  +   L   G+   A  +  E KR+
Sbjct: 547 GLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRK 584



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 7/194 (3%)

Query: 187 ERKNDQGKL--ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
           E+K  Q  +   + + S   RL + D AK      +  G   +  +++ LI  Y + G  
Sbjct: 407 EKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNV 466

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
           +EA  +F  M    ++PN +TYN +I A C +G V  K   +++ +M  NG+ PD  T+ 
Sbjct: 467 EEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKV--KEARKLWANMKANGMDPDSYTYT 524

Query: 304 SLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           SL+   C    + EA R LF+EM  +G+DQ+  TY  ++  + K  + D AF +  E+  
Sbjct: 525 SLIHGECIADNVDEAMR-LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKR 583

Query: 363 KNISPNVVTYSTMI 376
           K  + +   Y+ +I
Sbjct: 584 KGYTIDNKVYTALI 597


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 235/490 (47%), Gaps = 32/490 (6%)

Query: 202 ILGRLGKVDLAKNIFETALN-------EGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           ILG + K +   N + TA++       +G   T+  F+ L++ Y   G    A S+F  +
Sbjct: 63  ILGSIVKAN--NNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKI 120

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
            +    P  +T+N +I+     G   K  +   D ++  G   D++++ +L+    + G 
Sbjct: 121 LKLGYHPTTITFNTLINGICLNG-KLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGE 179

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             AA  +  ++  + ++ D+  YN +++++CK   +  A+++ +EM  K ISP+VVT+++
Sbjct: 180 TRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNS 239

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I G+   G+L +A  +F EM    I  D  +++ ++    K G    A  +   M   G
Sbjct: 240 LILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQG 299

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  D VTY++L+ GY    + ++ + +F  M    V+P+  +Y+ +I+   K  +  EA+
Sbjct: 300 VIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEAL 359

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +F+E    G+  D V Y++LID LCK G +  A  L+DEM   GI  +++TYNS+ID  
Sbjct: 360 SLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVL 419

Query: 555 GRSATTECTVDDVE--RDLGKQKESAN----LDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
            ++   +  +  V+  +D G Q         +D +C        + GR  N    VF  L
Sbjct: 420 CKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLC--------KGGRLKNA-QDVFQDL 470

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQ-------KMHKLKIKPNVVTFSAILNACSRCNSF 661
           + +               LC  G+F        KM    I P+ VT+  I+ A  R +  
Sbjct: 471 LIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDEN 530

Query: 662 EDASMLLEEL 671
           E A  LL E+
Sbjct: 531 EKAEKLLREM 540



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 230/483 (47%), Gaps = 49/483 (10%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLA--VCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           D  + V  F  MLR    P  + FN +L   V +    +  A +L +++  +GI   I T
Sbjct: 37  DVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVT 96

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           +N L++  C   +M  AF I A++      P  +T++T+I+G    G+L +AL+    + 
Sbjct: 97  FNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVI 156

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
            LG  LD+VSY T+++   K+G    AL + K++E   +  D V YN ++    K     
Sbjct: 157 ALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVS 216

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           +  +++ +M    +SP+++T+++LI  +   G  KEA  +F E     +  DV  +S L+
Sbjct: 217 DAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILV 276

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
           DALCK+G +  A ++L  M K+G+ P+VVTY+S++D +       C V++V +   K   
Sbjct: 277 DALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGY-------CLVNEVNK--AKHVF 327

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL-VAEKAGQGKKENRCRQEILCILGVFQK 635
           S       +     V     + N +I   G++ + ++A                L +F++
Sbjct: 328 S-------TMSRLGVAPHAHSYNIMINGLGKIKMVDEA----------------LSLFKE 364

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWV 695
           M    I P+ VT++++++   +      A  L++E+   +N   G+   +L  Y   I V
Sbjct: 365 MCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMH--NN---GIPADILT-YNSLIDV 418

Query: 696 --------QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN 747
                   +A++L  ++K      +   YN L D L   G+ + AQ V  +   +    N
Sbjct: 419 LCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVN 478

Query: 748 VWS 750
            W+
Sbjct: 479 AWT 481



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 203/422 (48%), Gaps = 29/422 (6%)

Query: 126 EEALH---HVTA--FARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFA 180
           +EALH   HV A  F  D VS                 Y  L+  L   GE   A+Q   
Sbjct: 146 KEALHFHDHVIALGFHLDQVS-----------------YRTLINGLCKIGETRAALQ--- 185

Query: 181 FAVKREERK--NDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
             +K+ E K  N    + + +I+ L +   V  A  ++   + +     V  F++LI  +
Sbjct: 186 -MLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGF 244

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
              G  +EA  +F+ M   N+ P++ T++ ++DA  K G +      +   M++ GV PD
Sbjct: 245 CVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDG-NITRAKNMLAVMMKQGVIPD 303

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
            +T++SL+           A+++F+ M   G+     +YN +++ + K   +D A  +  
Sbjct: 304 VVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFK 363

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
           EM  K I+P+ VTY+++IDG  K GR+  A  +  EM   GI  D ++YN+++ +  K  
Sbjct: 364 EMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNH 423

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
             ++A+ + K+++  GI+    TYN L+ G  K G+    + +F+ +     S N  TY+
Sbjct: 424 HIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYN 483

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            +I+   K GL+ EA  +  + +  G+  D V Y  +I AL +    E A  LL EM   
Sbjct: 484 IMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIR 543

Query: 539 GI 540
           G+
Sbjct: 544 GL 545


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 210/437 (48%), Gaps = 48/437 (10%)

Query: 163 LRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNE 222
           LR L  RGE  +A++    A     R+ D G  A A+I  L   G+   A+ +       
Sbjct: 74  LRSLVRRGELDEALRLVGSA-----RRPDAGTCA-ALIKKLSASGRTAEARRVLAAC--- 124

Query: 223 GYGNTVYAFSALISAYGRSG-------YCQE-------------------------AISV 250
             G  V A++A+++ Y  +G       +C E                         A++V
Sbjct: 125 --GPDVMAYNAMMAGYCGAGQVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAV 182

Query: 251 FNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AV 308
            + M R    P++VTY  +++A C + G  +K  +++ D+M   G  PD +T+N ++  +
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSG--YKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 240

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
           C  G + +A   L N +   G + +  +YN +L  +C   + + A E+M EM  K   PN
Sbjct: 241 CQEGRVDDAIEFLKN-LPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 299

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           VVT++ +I    + G ++ AL +  ++   G   + +SYN +L  + K  + ++A+    
Sbjct: 300 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLD 359

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            M S G   D V+YN LL    + G+ D    +  Q+K    +P L++Y+T+ID  +K G
Sbjct: 360 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 419

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
             KEA+++  E    GL+ D++ YS +   LC+   +E A+    ++   GIRPN V YN
Sbjct: 420 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 479

Query: 549 SIIDAFGRSATTECTVD 565
           +II    +   T   +D
Sbjct: 480 AIILGLCKRRETHSAID 496



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 230/497 (46%), Gaps = 39/497 (7%)

Query: 126 EEALHHVTAFARDDV-SLGDILKKFE-----------FKLCGAD--DYTFLLRELGNRGE 171
           +EAL  V +  R D  +   ++KK                CG D   Y  ++      G+
Sbjct: 84  DEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAMMAGYCGAGQ 143

Query: 172 WSKAIQ-CFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYA 230
              A + C   AV+R+    D     + +  + GR G+   A  + +  L       V  
Sbjct: 144 VDAARRWCAERAVERDAYTCD-----TLIRGLCGR-GRTANALAVLDEMLRRRCVPDVVT 197

Query: 231 FSALISAY-GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           ++ L+ A   RSGY ++A+ + + M+     P++VTYN V++  C +G VD    +E   
Sbjct: 198 YTILLEATCKRSGY-KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD--DAIEFLK 254

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           ++   G +P+ +++N +L        WE A  L  EM  +G   ++ T+N L+  +C+  
Sbjct: 255 NLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKG 314

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            ++ A E++ ++P    SPN ++Y+ ++  + K  ++D A+     M   G   D VSYN
Sbjct: 315 LVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYN 374

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+L+   + G  + A+ +  +++  G     ++YN ++ G  K GK  E   +  +M + 
Sbjct: 375 TLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 434

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + P+++TYST+     +    ++A++ F + +  G++ + VLY+A+I  LCK     SA
Sbjct: 435 GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSA 494

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           + L   M   G  PN  TY  +I+        +       RDL        LD +CS+ +
Sbjct: 495 IDLFAYMIGNGCMPNESTYTILIEGLAYEGLIK-----EARDL--------LDELCSRGE 541

Query: 589 KDVQEAGRTDNQIIKVF 605
           + + +    D   +  F
Sbjct: 542 EILLDVHLIDVAFLTTF 558



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 122/297 (41%), Gaps = 55/297 (18%)

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL---GRFEEALLVCKEMESSGIRK 437
           + G LD+AL +    +       R    T  ++  KL   GR  EA  V   + + G   
Sbjct: 79  RRGELDEALRLVGSAR-------RPDAGTCAALIKKLSASGRTAEARRV---LAACG--P 126

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D + YNA++ GY   G+ D  RR   +     V  +  T  TLI      G    A+ + 
Sbjct: 127 DVMAYNAMMAGYCGAGQVDAARRWCAERA---VERDAYTCDTLIRGLCGRGRTANALAVL 183

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E  +     DVV Y+ L++A CK    + A+ LLDEM  +G  P++VTYN +++     
Sbjct: 184 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI--- 240

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI---IKVFGQLVAEKAG 614
              E  VDD    L                 K++   G   N +   I + G   AE+  
Sbjct: 241 -CQEGRVDDAIEFL-----------------KNLPSYGCEPNTVSYNIVLKGLCTAERWE 282

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             ++             +  +M +    PNVVTF+ +++   R    E A  +LE++
Sbjct: 283 DAEE-------------LMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 326


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 250/522 (47%), Gaps = 40/522 (7%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R   +D+A+ ++   +  G   TV  ++ ++ ++ + G  QEA+ +   M++    PN V
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDV 226

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFN 323
           TYN +++     G + +   E+  +MLR G++    T++ L+   C +G L EA+R L  
Sbjct: 227 TYNVLVNGLSHSG-ELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASR-LGE 284

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EM+ RG    + TYNT++  +CK  ++  A +++  M  KN+ P++V+Y+T+I GY + G
Sbjct: 285 EMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLG 344

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            + +A  +F+E++F G+    V+YNT++    ++G  + A+ +  EM   G   D  T+ 
Sbjct: 345 NIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFT 404

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+ G+ K G     + +F++M    + P+   Y T I    K G   +A  +  E    
Sbjct: 405 ILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLAR 464

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           G   D++ Y+  ID L K G ++ A  L+ +M   G+ P+ VTY SII A   +      
Sbjct: 465 GFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHL--- 521

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
                     +K  A    M S   K +  +       +  +  L+   A +G+ +    
Sbjct: 522 ----------RKARAVFLEMLS---KGIFPS-------VVTYTVLIHSYAVRGRLK---- 557

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH 683
              L IL  F+ MH+  + PNV+T++A++N   +    + A     E++          +
Sbjct: 558 ---LAILHFFE-MHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTY 613

Query: 684 GLLMGYRDNI--WVQALSLF----DEVKLMDSSTASAFYNAL 719
            +L+    N+  W +AL L+    D     DS T SA    L
Sbjct: 614 TILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL 655



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 194/396 (48%), Gaps = 3/396 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +L     +G+  +A+Q      K     ND     + +++ L   G+++ AK + + 
Sbjct: 193 YNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVT--YNVLVNGLSHSGELEQAKELIQE 250

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L  G   + Y +  LI  Y   G   EA  +   M      P LVTYN ++    K G 
Sbjct: 251 MLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWG- 309

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                 ++ D M+   + PD +++N+L+   +R G    A  LF E+  RG+   + TYN
Sbjct: 310 RVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYN 369

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+D +C+   +D+A  +  EM      P+V T++ ++ G+ K G L  A  +F EM   
Sbjct: 370 TLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNR 429

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  DR +Y T +    KLG   +A  + +EM + G   D +TYN  + G  K G   E 
Sbjct: 430 GLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEA 489

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + ++M  + + P+ +TY+++I  +   G  ++A  +F E    G+   VV Y+ LI +
Sbjct: 490 SELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHS 549

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
               G ++ A+    EM ++G+ PNV+TYN++I+  
Sbjct: 550 YAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGL 585



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 179/355 (50%), Gaps = 3/355 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G+V  A+ + +  +N+     + +++ LI  Y R G   EA  +F  ++   L P+
Sbjct: 305 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPS 364

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
           +VTYN +ID   + G D    + + D+M+++G  PD  TF  L+   C  G L   A+ L
Sbjct: 365 VVTYNTLIDGLCRMG-DLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNL-PMAKEL 422

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F+EM++RG+  D F Y T +    K      AF +  EM A+   P+++TY+  IDG  K
Sbjct: 423 FDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHK 482

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G L +A  +  +M + G+  D V+Y +++  +   G   +A  V  EM S GI    VT
Sbjct: 483 LGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVT 542

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  L+  Y  +G+       F +M    V PN++TY+ LI+   K     +A + F E +
Sbjct: 543 YTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQ 602

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             G+  +   Y+ LI+  C  G  + A+ L  +M    I+P+  T+++++    +
Sbjct: 603 AKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNK 657



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 197/387 (50%), Gaps = 32/387 (8%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVC-SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +F  M+  G+ PD    N +L +   R    + AR ++N MV  GI   + TYNT+LD+ 
Sbjct: 141 VFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSF 200

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK  ++  A +++ +M      PN VTY+ +++G + +G L+ A  +  EM  LG+ +  
Sbjct: 201 CKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSA 260

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +Y+ ++  Y + G+ +EA  + +EM S G     VTYN ++ G  K G+  + R++ + 
Sbjct: 261 YTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDV 320

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    + P+L++Y+TLI  Y++ G   EA  +F E +  GL   VV Y+ LID LC+ G 
Sbjct: 321 MVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGD 380

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           ++ A+ L DEM K G  P+V T+  ++  F +             +L   KE    D M 
Sbjct: 381 LDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLG-----------NLPMAKEL--FDEML 427

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
           ++  +  + A      I ++ G+L   K G   K            G+ ++M      P+
Sbjct: 428 NRGLQPDRFA-----YITRIVGEL---KLGDPSKA----------FGMQEEMLARGFPPD 469

Query: 645 VVTFSAILNACSRCNSFEDASMLLEEL 671
           ++T++  ++   +  + ++AS L++++
Sbjct: 470 LITYNVFIDGLHKLGNLKEASELVKKM 496



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 132/257 (51%), Gaps = 1/257 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           +LG + +AK +F+  LN G     +A+   I    + G   +A  +   M      P+L+
Sbjct: 412 KLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLI 471

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TYN  ID   K G + K   E+   ML NG+ PD +T+ S++      G    AR +F E
Sbjct: 472 TYNVFIDGLHKLG-NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLE 530

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+ +GI   + TY  L+ +     ++ LA     EM  K + PNV+TY+ +I+G  K  +
Sbjct: 531 MLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRK 590

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +D A   F+EM+  GI  ++ +Y  +++    LG ++EAL + K+M    I+ D+ T++A
Sbjct: 591 MDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSA 650

Query: 445 LLGGYGKQGKYDEVRRM 461
           LL    K  K   VR +
Sbjct: 651 LLKHLNKDYKSHVVRHL 667



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 136/250 (54%), Gaps = 1/250 (0%)

Query: 308 VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC-KGAQMDLAFEIMAEMPAKNIS 366
           + ++  + E    +F +MV +G+  D+   N +L  +  + + +D+A E+   M    I 
Sbjct: 128 IYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIR 187

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P VVTY+TM+D + K G++ +AL +  +M+ +G   + V+YN +++  +  G  E+A  +
Sbjct: 188 PTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKEL 247

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            +EM   G+   A TY+ L+ GY ++G+ DE  R+ E+M +    P L+TY+T++    K
Sbjct: 248 IQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCK 307

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G   +A ++        L  D+V Y+ LI    + G +  A  L  E+   G+ P+VVT
Sbjct: 308 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVT 367

Query: 547 YNSIIDAFGR 556
           YN++ID   R
Sbjct: 368 YNTLIDGLCR 377



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/342 (21%), Positives = 139/342 (40%), Gaps = 51/342 (14%)

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG---YGKQGKY 455
           G     ++Y  +L I A+ G    A  V +++ S  +    V    L      Y K+   
Sbjct: 76  GFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKSML 135

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVY-SKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
           ++   +F +M +  + P+L   + ++ +   +      A +++    + G++  VV Y+ 
Sbjct: 136 EKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNT 195

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           ++D+ CK G V+ A+ LL +M K G  PN VTYN +++    S   E   + ++  L   
Sbjct: 196 MLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEML--- 252

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
                           ++ +  T + +I+ + +      GQ  + +R  +E+L    V  
Sbjct: 253 -------------RLGLEVSAYTYDPLIRGYCE-----KGQLDEASRLGEEMLSRGAV-- 292

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE---------ELRLFDNQVYGVAHGL 685
                   P +VT++ I+    +     DA  LL+         +L  ++  +YG     
Sbjct: 293 --------PTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLG 344

Query: 686 LMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
            +G       +A  LF E++      +   YN L D L   G
Sbjct: 345 NIG-------EAFLLFAELRFRGLVPSVVTYNTLIDGLCRMG 379



 Score = 43.1 bits (100), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 34/151 (22%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +  A+ +F   L++G   +V  ++ LI +Y   G  + AI  F  M    + PN++TY
Sbjct: 519 GHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 578

Query: 267 NAVIDA-CGKGGVD---------------------------------FKHVVEIFDDMLR 292
           NA+I+  C    +D                                 ++  + ++ DML 
Sbjct: 579 NALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 638

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
             +QPD  T ++LL   ++       R+L N
Sbjct: 639 REIQPDSCTHSALLKHLNKDYKSHVVRHLEN 669


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 203/388 (52%), Gaps = 7/388 (1%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +  A  + + A+ +G+      + +LI+     G  + A+ +FN  +  +LKP+LV Y
Sbjct: 329 GMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVY 388

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEM 325
           N+++    + G+   H +++ ++M+  G  PD  T+N ++  +C  G + +AA  + N+ 
Sbjct: 389 NSLVKGLCRQGL-ILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAV-VMNDA 446

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           + +G   D+FT+NTL+D  CK  ++D A +++  M    I+P+V+TY+++++G  KAG+ 
Sbjct: 447 IVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKA 506

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            +    F EM   G   + ++YN ++  + K+ + EEA  V   M   G+  DAV++N L
Sbjct: 507 KEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTL 566

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G+ + G  D    +F+++     S    T++ LI  YS     + A +IF E    G 
Sbjct: 567 IHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGY 626

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID--AFGRSATTECT 563
           K D+  Y  L+D LCK   V+ A + L EM  +G  P++ T+  +++  A     +    
Sbjct: 627 KPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVA 686

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDV 591
           +  +   +G   E   +D + S D K++
Sbjct: 687 IIHIMVRMGVVPEV--VDTILSTDKKEI 712



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 183/355 (51%), Gaps = 3/355 (0%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           KV  A       +N+G     + ++ +I  Y +SG  QEA  +          P+ VTY 
Sbjct: 295 KVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYC 354

Query: 268 AVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           ++I+  C +G  D +  +E+F++     ++PD + +NSL+    R GL   A  + NEMV
Sbjct: 355 SLINGLCAEG--DIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMV 412

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G   DI+TYN +++ +CK   +  A  +M +   K   P+V T++T+IDGY K  +LD
Sbjct: 413 EEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLD 472

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            AL +   M   GI  D ++YN+VL+   K G+ +E     +EM   G R +A+TYN L+
Sbjct: 473 SALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILI 532

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
             + K  + +E   +  +M  D + P+ ++++TLI  + + G    A  +F++  + G  
Sbjct: 533 ENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYS 592

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           A    ++ LI A      ++ A  +  EM  +G +P++ TY  ++D   ++A  +
Sbjct: 593 ATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVD 647



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 175/362 (48%), Gaps = 11/362 (3%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+++F+  L       V  F+ ++ A  + G   E+ ++   + +  +  N  T N  I 
Sbjct: 195 ARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIR 254

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGI 330
              + G   +  V + + M    V PD +T+N+L+  +C    + EAA+ L   M+++G 
Sbjct: 255 GLCEDG-RLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYL-GRMMNQGC 311

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             D FTYNT++D  CK   +  A E++ +   K   P+ VTY ++I+G    G ++ AL 
Sbjct: 312 IPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALE 371

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +F+E +   +  D V YN+++    + G    AL V  EM   G   D  TYN ++ G  
Sbjct: 372 LFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLC 431

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K G   +   +          P++ T++TLID Y K      A+Q+       G+  DV+
Sbjct: 432 KMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVI 491

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y+++++ LCK G  +      +EM  +G RPN +TYN +I+ F       C ++ +E  
Sbjct: 492 TYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENF-------CKINQLEEA 544

Query: 571 LG 572
            G
Sbjct: 545 SG 546



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 165/349 (47%), Gaps = 3/349 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++I+ L   G ++ A  +F  A  +     +  +++L+    R G    A+ V N M   
Sbjct: 355 SLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEE 414

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
              P++ TYN +I+   K G +      + +D +  G  PD  TFN+L+   C R  L +
Sbjct: 415 GCHPDIWTYNIIINGLCKMG-NISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKL-D 472

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +A  L   M   GI  D+ TYN++L+ +CK  +     E   EM  K   PN +TY+ +I
Sbjct: 473 SALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILI 532

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           + + K  +L++A  +   M   G+  D VS+NT++  + + G  + A L+ ++++  G  
Sbjct: 533 ENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYS 592

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             A T+N L+G Y  +       ++F +M +    P+L TY  L+D   K      A   
Sbjct: 593 ATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAH 652

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
             E    G    +  +  +++ L  N  V  AV+++  M + G+ P VV
Sbjct: 653 LAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV 701



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/418 (22%), Positives = 189/418 (45%), Gaps = 22/418 (5%)

Query: 144 DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           ++LK   FK    D  T+  L+  L   G+  +A++ F  A  ++ + +    + ++++ 
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLV--VYNSLVK 393

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            L R G +  A  +    + EG    ++ ++ +I+   + G   +A  V N        P
Sbjct: 394 GLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLP 453

Query: 262 NLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           ++ T+N +ID  C +  +D    +++ + M   G+ PD IT+NS+L    + G  +    
Sbjct: 454 DVFTFNTLIDGYCKRLKLD--SALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNE 511

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
            F EM+ +G   +  TYN L++  CK  Q++ A  ++  M    + P+ V+++T+I G+ 
Sbjct: 512 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFC 571

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           + G LD A  +F ++   G      ++N ++  Y+     + A  +  EM S G + D  
Sbjct: 572 RNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLY 631

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY  L+ G  K    D       +M +    P++ T+  ++++ +      EA+ I    
Sbjct: 632 TYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIM 691

Query: 501 KQAGL------------KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            + G+            K ++     L++ L K G +        E+  EG+R N +T
Sbjct: 692 VRMGVVPEVVDTILSTDKKEIAAPKILVEELMKKGHISYRAY---EVLHEGVRDNKLT 746



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 114/511 (22%), Positives = 216/511 (42%), Gaps = 50/511 (9%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT--YNAVIDACGKGGV 278
           +E   +T+ A+ ALI     +G   +  +   S  R +L P+ +   Y A I A  + G 
Sbjct: 28  SELTASTIPAYRALIRELVSAGRLDDVDAALAS-ARSHLAPDSLQPLYVASIQAYARAG- 85

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +  V+ F+ M      P    +N+++         + A  ++  M+  G+  D  T+ 
Sbjct: 86  RLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHT 145

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
             L + C   +  +A  ++  +  +        Y T++ G    G   +A ++F EM   
Sbjct: 146 VRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGR 205

Query: 399 GIGLDRVSYNTVL-------------SIYAKL----------------------GRFEEA 423
            +  D  ++N VL             ++ AK+                      GR EEA
Sbjct: 206 DVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEA 265

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
           + + + M  + +  D VTYN L+ G  K  K  E  +   +M      P+  TY+T+ID 
Sbjct: 266 VALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDG 324

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           Y K G+ +EA ++ ++    G   D V Y +LI+ LC  G +E A+ L +E   + ++P+
Sbjct: 325 YCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPD 384

Query: 544 VVTYNSIIDAFGRSA----TTECTVDDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRT 597
           +V YNS++    R        +   + VE        + N  ++ +C     ++ +A   
Sbjct: 385 LVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMG--NISDAAVV 442

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRC-RQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
            N  I V G L          +  C R ++   L + ++M    I P+V+T++++LN   
Sbjct: 443 MNDAI-VKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLC 501

Query: 657 RCNSFEDASMLLEELRLFDNQVYGVAHGLLM 687
           +    ++ +   EE+ L   +   + + +L+
Sbjct: 502 KAGKAKEVNETFEEMILKGCRPNAITYNILI 532



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 91/407 (22%), Positives = 170/407 (41%), Gaps = 22/407 (5%)

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDA-LNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           AE  ++  +  +  Y  +I     AGRLDD    + S    L     +  Y   +  YA+
Sbjct: 24  AEPSSELTASTIPAYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYAR 83

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
            GR   A+   + M+       A  YNA++        +D+  +++ +M A  V+P+  T
Sbjct: 84  AGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDART 143

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           ++  +  +   G    A+++ R   + G  A    Y  ++  L  +G   +A  L DEM 
Sbjct: 144 HTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEML 203

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
              + P+V T+N+++ A  +      +   + + L K+  SAN    C+   + + E GR
Sbjct: 204 GRDVFPDVATFNNVLHALCQKGDVMESGALLAKVL-KRGMSAN-KFTCNIWIRGLCEDGR 261

Query: 597 TDNQI--IKVFGQLVAEKA------GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
            +  +  ++  G  VA          +G  ++   QE    LG   +M      P+  T+
Sbjct: 262 LEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLG---RMMNQGCIPDDFTY 318

Query: 649 SAILNACSRCNSFEDASMLLEE--LRLF--DNQVY-GVAHGLLMGYRDNIWVQALSLFDE 703
           + I++   +    ++A+ LL++   + F  D   Y  + +GL     +    +AL LF+E
Sbjct: 319 NTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCA---EGDIERALELFNE 375

Query: 704 VKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWS 750
            +  D       YN+L   L   G    A  V+ E        ++W+
Sbjct: 376 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWT 422


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 198/385 (51%), Gaps = 9/385 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G V+ A  + E   N GY      + AL++   + G    A+     M + NL PN+V Y
Sbjct: 159 GDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVY 218

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEM 325
           NA++D   K G+     + +  +M    V+P+ +T+N L+  +C   G W     LFNEM
Sbjct: 219 NAILDGLCKRGL-VGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEM 277

Query: 326 V-HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           V  +GI  D+ T++ L+D  CK   +  A  ++  M    + PNVVTY+++I GY    +
Sbjct: 278 VAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQ 337

Query: 385 LDDALNMFSEMKFLGIGL--DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           +++A+ +F  M   G G     V++N+++  + K+   ++A+ +  EM   G+  D  T+
Sbjct: 338 MEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTW 397

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
            +L+GG+ +  K    R +F  MK     PNL T + ++D   K  L  EA+ +FR   +
Sbjct: 398 TSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMK 457

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
           +GL  D+V+Y+ ++D +CK G +  A  LL  +  +G++ +  TYN +I    R    E 
Sbjct: 458 SGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCR----EG 513

Query: 563 TVDDVERDLGKQKESANLDAMCSQD 587
            +DD E  L K KE+      CS +
Sbjct: 514 LLDDAEELLRKMKENGCPPNKCSYN 538



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 182/393 (46%), Gaps = 40/393 (10%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+++ L ++G    A    +  +    G  V  ++A++    + G   EA+ + + M   
Sbjct: 185 ALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVV 244

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDML-RNGVQPDRITFNSLLAVCSRGGLW 315
           N++PN+VTYN +I   CG+ G  ++  V +F++M+   G+ PD  TF+ L+    + GL 
Sbjct: 245 NVEPNVVTYNCLIQGLCGEFG-GWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLL 303

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM--PAKNISPNVVTYS 373
             A ++   MV  G++ ++ TYN+L+   C  +QM+ A  +   M    +   P+VVT++
Sbjct: 304 LRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHN 363

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF------------- 420
           ++I G+ K   +D A+++ SEM   G+  D  ++ +++  + ++ +              
Sbjct: 364 SLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEH 423

Query: 421 ----------------------EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
                                  EA+ + + M  SG+  D V YN +L G  K GK ++ 
Sbjct: 424 GQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDA 483

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
           R++   +    +  +  TY+ +I    + GL  +A ++ R+ K+ G   +   Y+  +  
Sbjct: 484 RKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQG 543

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           L +   +  +   L  M  +G   +  T   +I
Sbjct: 544 LLRKYDIARSRKYLQIMKDKGFPVDATTAELLI 576



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 143/282 (50%), Gaps = 5/282 (1%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID--QDIFTYNTLL 341
           V+ F  ML     P    FN L  + ++   +  A +L  +++H   D   D+ T N  +
Sbjct: 59  VDFFHRMLTLTPFPCIQDFNLLFGLVAKSQHYATAISLI-KILHSLGDGSADVCTLNIAI 117

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           + +C   +  L F ++  M    + P +VT +T+++G    G ++ AL +  +M+ LG  
Sbjct: 118 NCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYH 177

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            +  +Y  +++   K+G    AL   K+M    +  + V YNA+L G  K+G   E   +
Sbjct: 178 CNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGL 237

Query: 462 FEQMKADCVSPNLLTYSTLID-VYSKGGLYKEAMQIFREF-KQAGLKADVVLYSALIDAL 519
             +M    V PN++TY+ LI  +  + G ++E + +F E   + G+  DV  +S L+D  
Sbjct: 238 LHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGF 297

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           CK GL+  A S++  M + G+ PNVVTYNS+I  +   +  E
Sbjct: 298 CKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQME 339



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 135/310 (43%), Gaps = 38/310 (12%)

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG-LDRVSYNTVLSIYAKLGRFEEALL 425
           P +  ++ +    AK+     A+++   +  LG G  D  + N  ++    + +      
Sbjct: 72  PCIQDFNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGFA 131

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           V   M   G+    VT N ++ G   +G  +    + E+M+      N  TY  L++   
Sbjct: 132 VLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLC 191

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G    A++  ++  +  L  +VV+Y+A++D LCK GLV  A+ LL EM    + PNVV
Sbjct: 192 KIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVV 251

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
           TYN             C +  +  + G  +E   L       ++ V E G   +  ++ F
Sbjct: 252 TYN-------------CLIQGLCGEFGGWREGVGLF------NEMVAEKGIVPD--VQTF 290

Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA-CSRCNSFEDA 664
             LV    G  K+    R E      V   M ++ ++PNVVT+++++   C R       
Sbjct: 291 SILVD---GFCKEGLLLRAE-----SVVGFMVRIGVEPNVVTYNSLIAGYCLR------- 335

Query: 665 SMLLEELRLF 674
           S + E +R+F
Sbjct: 336 SQMEEAMRVF 345



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 97/247 (39%), Gaps = 35/247 (14%)

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG-LKADVVLYSALIDALC 520
           F +M      P +  ++ L  + +K   Y  A+ + +     G   ADV   +  I+ LC
Sbjct: 62  FHRMLTLTPFPCIQDFNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCLC 121

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
                    ++L  MTK G+ P +VT N+I++         C   DV   L   ++  NL
Sbjct: 122 HMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGL-------CIEGDVNHALWLVEKMENL 174

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
              C+                 + +G LV      G             L   +KM K  
Sbjct: 175 GYHCNA----------------RTYGALVNGLCKIGDTSGA--------LECLKKMVKRN 210

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG-LLMGYRDNI--WVQA 697
           + PNVV ++AIL+   +     +A  LL E+ + + +   V +  L+ G       W + 
Sbjct: 211 LGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREG 270

Query: 698 LSLFDEV 704
           + LF+E+
Sbjct: 271 VGLFNEM 277


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 210/436 (48%), Gaps = 39/436 (8%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           G    +FLL +L  +GE   A+  F   V      +    + S +++   ++G+VD+A  
Sbjct: 190 GLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVY--MCSIVVNAHCQVGRVDVAME 247

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-C 273
           + E  + EG    V  ++ L++ Y   G  +    V   M    +  N+VT   ++   C
Sbjct: 248 VLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYC 307

Query: 274 GKGGVD----------------------------------FKHVVEIFDDMLRNGVQPDR 299
            KG +D                                   +  V I D+MLR G++ + 
Sbjct: 308 KKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNM 367

Query: 300 ITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
           +  N+L+   C  G + EA R +F  MV   +  D ++YNTLLD  C+  ++  AF +  
Sbjct: 368 VICNTLIKGYCKLGQVCEAER-VFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCE 426

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
           EM    I+P VVTY+T+I G    G  DDAL+++  M   G+  + +S  T+L  + K+G
Sbjct: 427 EMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMG 486

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
             + A+++ KE+   G  K  V +N ++ G  K GK  E   +F++MK   +SP+ +TY 
Sbjct: 487 DSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYR 546

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           TL D Y K G  +EA QI    ++  + A + +Y++LID L K   +     LL EM   
Sbjct: 547 TLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTR 606

Query: 539 GIRPNVVTYNSIIDAF 554
           G+ PNVVTY ++I  +
Sbjct: 607 GLSPNVVTYGTLISGW 622



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 136/543 (25%), Positives = 254/543 (46%), Gaps = 33/543 (6%)

Query: 150 EFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKV 209
           EF  C    +  L++    RG    A+  + F       +    +  S ++  L + G+ 
Sbjct: 151 EFGFCSGV-FDMLMKAFAERGMTKHAL--YVFDEMSRIGRVPGLRSCSFLLGKLVQKGEG 207

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
            +A  +F+  +  G    VY  S +++A+ + G    A+ V   M +  L+PN+VTYN +
Sbjct: 208 RVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGL 267

Query: 270 IDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVH 327
           ++   G+G  DF+ V  +   M   GV  + +T   L+   C +G + EA + L      
Sbjct: 268 VNGYVGRG--DFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEED 325

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
             +  D   Y  L+D  C+  +M+ A  I  EM    +  N+V  +T+I GY K G++ +
Sbjct: 326 ELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCE 385

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +F  M    +  D  SYNT+L  Y + G+  +A ++C+EM   GI    VTYN ++ 
Sbjct: 386 AERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIK 445

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           G    G YD+   ++  M    V+PN ++  T++D + K G    AM +++E    G   
Sbjct: 446 GLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTK 505

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
             V ++ +I  LCK G +  A ++ D M + G+ P+ +TY ++ D + ++   +     +
Sbjct: 506 STVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQ-EAFQI 564

Query: 568 ERDLGKQKESANLDAMCSQDDK---------------DVQEAGRTDNQIIKVFGQLVAEK 612
           +  + +Q  SA+++   S  D                ++Q  G + N +   +G L++  
Sbjct: 565 KGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVV--TYGTLISGW 622

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             + K +            ++ +M +    PNVV  S I+++  R +   +A+++L+++ 
Sbjct: 623 CDEQKLDKA--------FHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKML 674

Query: 673 LFD 675
            FD
Sbjct: 675 DFD 677



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 185/401 (46%), Gaps = 9/401 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +++ L + G +  A+  +   V+R    N+       M+    ++G  D A  +++ 
Sbjct: 440 YNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEIS--CCTMLDCFFKMGDSDRAMMLWKE 497

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L  G+  +  AF+ +IS   + G   EA +VF+ MK   L P+ +TY  + D   K G 
Sbjct: 498 ILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNG- 556

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           + +   +I   M R  +      +NSL+    +        +L  EM  RG+  ++ TY 
Sbjct: 557 NVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYG 616

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+   C   ++D AF +  EM  +  +PNVV  S ++    +  R+ +A  +  +M   
Sbjct: 617 TLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDF 676

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI---RKDAVTYNALLGGYGKQGKY 455
            I      +N       K     EA  +   ++ S I     + + YN  + G  K GK 
Sbjct: 677 DI---LAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKL 733

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           DE R +   + +    P+  TY TLI   S  G   EA ++  E  + GL  ++ +Y+AL
Sbjct: 734 DEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNAL 793

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           I+ LCK G ++ A  L  ++ ++G+ PN VTYN +I  + R
Sbjct: 794 INGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCR 834



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 136/585 (23%), Positives = 249/585 (42%), Gaps = 109/585 (18%)

Query: 160 TFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETA 219
           T L+R    +G+  +A +     V+ +E      ++   ++    ++G+++ A  I +  
Sbjct: 300 TMLMRGYCKKGKMDEAEKLLR-EVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEM 358

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGV 278
           L  G    +   + LI  Y + G   EA  VF  M  +NLKP+  +YN ++D  C +G V
Sbjct: 359 LRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKV 418

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                  + ++ML +G+ P  +T+N+++      G ++ A +L++ MV RG+  +  +  
Sbjct: 419 --SKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCC 476

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           T+LD   K    D A  +  E+  +  + + V ++TMI G  K G+L +A  +F  MK L
Sbjct: 477 TMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKEL 536

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEA----------------------------------- 423
           G+  D ++Y T+   Y K G  +EA                                   
Sbjct: 537 GLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDV 596

Query: 424 --LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
             LLV  EM++ G+  + VTY  L+ G+  + K D+   ++ +M     +PN++  S ++
Sbjct: 597 TDLLV--EMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIV 654

Query: 482 --------------------------------DVYSKGGLYKEAMQIFREFKQAGL---K 506
                                           D   K  L  EA +I     ++ +    
Sbjct: 655 SSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSL 714

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
           ++ ++Y+  ID LCK+G ++ A S+L  +   G  P+  TY ++I A        C+V  
Sbjct: 715 SNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHA--------CSV-- 764

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
                     S N+D      D ++ E G   N  I ++  L+      G  +   R   
Sbjct: 765 ----------SGNVDEAFKLRD-EMLEKGLIPN--ITIYNALINGLCKLGNIDRAQR--- 808

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                +F K+++  + PN VT++ ++    R    + AS L E++
Sbjct: 809 -----LFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKM 848



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 88/409 (21%), Positives = 165/409 (40%), Gaps = 92/409 (22%)

Query: 138 DDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS 197
           +++S   +L  F FK+  +D    L +E+  RG ++K+   F                 +
Sbjct: 471 NEISCCTMLDCF-FKMGDSDRAMMLWKEILGRG-FTKSTVAF-----------------N 511

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR- 256
            MIS L ++GK+  A  +F+     G       +  L   Y ++G  QEA  +   M+R 
Sbjct: 512 TMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQ 571

Query: 257 --------YN--------------------------LKPNLVTYNAVIDA-CGKGGVDFK 281
                   YN                          L PN+VTY  +I   C +  +D  
Sbjct: 572 AMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLD-- 629

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI----------- 330
               ++ +M+  G  P+ +  + +++   R      A  + ++M+   I           
Sbjct: 630 KAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKL 689

Query: 331 -----------------DQDI-------FTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
                              DI         YN  +D +CK  ++D A  +++ + ++   
Sbjct: 690 VKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFL 749

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P+  TY T+I   + +G +D+A  +  EM   G+  +   YN +++   KLG  + A  +
Sbjct: 750 PDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRL 809

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
             ++   G+  +AVTYN L+G Y + G  D+  R+ E+M  + +S  ++
Sbjct: 810 FYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858


>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 189/394 (47%), Gaps = 35/394 (8%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           RL   D A  ++   L  GY   ++AF+ L+ A  +     +A  VF  MKR + +P+  
Sbjct: 200 RLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTF 259

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TY  +I   GK G      + +F  ML  G   + I +N+++   ++G + + A  LF++
Sbjct: 260 TYTIMIRMTGKAG-KTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSK 318

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY------------ 372
           MV  G   + FTY+ LL+ +    Q++   + + EM  K ++  +  Y            
Sbjct: 319 MVENGCQPNEFTYSVLLNVLVAEGQLN-KLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSS 377

Query: 373 ---------------------STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
                                 +M++    +G++ +A+++ +      I  D + YNTV 
Sbjct: 378 EAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVF 437

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           +   +L +      + ++M+  G   D  TYN L+  YG+ G+ D   ++FE+++     
Sbjct: 438 TALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQ 497

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P++++Y++LI+   K G   EA   F+E ++ GL  DVV YS LI+   K   VE A SL
Sbjct: 498 PDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSL 557

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
            DEM  EG  PN+VTYN ++D   RS  T   VD
Sbjct: 558 FDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVD 591



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 190/383 (49%), Gaps = 37/383 (9%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++  L +  KVD A  +FE           + ++ +I   G++G   E++++F +M    
Sbjct: 229 LLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKG 288

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC--------- 309
              NL+ YN +I+A  KG +  K V+ +F  M+ NG QP+  T++ LL V          
Sbjct: 289 FTLNLIAYNTMIEALAKGRMADKAVL-LFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKL 347

Query: 310 -----------------------SRGGLWEAARNLFNEM--VHRGIDQDIFTYNTLLDAI 344
                                  S+ G    A  LF  M  VH   D+D   Y ++L+++
Sbjct: 348 DNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKD--AYMSMLESL 405

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C   ++  A +++     K I+ + + Y+T+     +  ++    +++ +MK  G   D 
Sbjct: 406 CSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDI 465

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +YN ++S Y + GR + A+ + +E+E+S  + D ++YN+L+   GK G  DE    F++
Sbjct: 466 FTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKE 525

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M+   ++P+++TYSTLI+ + K    + A  +F E    G   ++V Y+ L+D L ++G 
Sbjct: 526 MQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGR 585

Query: 525 VESAVSLLDEMTKEGIRPNVVTY 547
              AV L  ++ ++G+ P+ +TY
Sbjct: 586 TAEAVDLYAKLKQQGLTPDSITY 608



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 191/389 (49%), Gaps = 35/389 (8%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +  LL  L    +  KA + F   +KR   + D     + MI + G+ GK D +  +F+ 
Sbjct: 226 FNMLLDALAKDQKVDKAYKVFE-DMKRRHCEPDTFTY-TIMIRMTGKAGKTDESLALFQA 283

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            L +G+   + A++ +I A  +     +A+ +F+ M     +PN  TY+ +++    +G 
Sbjct: 284 MLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQ 343

Query: 278 VD-FKHVVE-----------------------------IFDDMLRNGVQPDRITFNSLL- 306
           ++   ++VE                             +F +M     + D+  + S+L 
Sbjct: 344 LNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLE 403

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
           ++CS G + EA  +L N    + I  D   YNT+  A+ +  Q+    ++  +M      
Sbjct: 404 SLCSSGKIAEAI-DLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPP 462

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P++ TY+ +I  Y +AGR+D A+ +F E++      D +SYN++++   K G  +EA + 
Sbjct: 463 PDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMR 522

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            KEM+  G+  D VTY+ L+  +GK  K +    +F++M A+  SPNL+TY+ L+D   +
Sbjct: 523 FKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLER 582

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            G   EA+ ++ + KQ GL  D + Y+ L
Sbjct: 583 SGRTAEAVDLYAKLKQQGLTPDSITYAVL 611



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 234/504 (46%), Gaps = 51/504 (10%)

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           ++  S+ + M++  +K ++ T N +I   G    D    V +     + G++ +  ++  
Sbjct: 141 EQTESLLDDMEKRGVKGSISTVNILIGFFG----DLDRCVGLVK---KWGLRFNAYSYKC 193

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           LL    R    + A  ++ +M+  G   DIF +N LLDA+ K  ++D A+++  +M  ++
Sbjct: 194 LLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRH 253

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
             P+  TY+ MI    KAG+ D++L +F  M   G  L+ ++YNT++   AK    ++A+
Sbjct: 254 CEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAV 313

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
           L+  +M  +G + +  TY+ LL     +G+ +++  + E  K      N   Y+  +   
Sbjct: 314 LLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVEMSKK---YMNKQIYAYFVRTL 370

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
           SK G   EA ++F        K D   Y +++++LC +G +  A+ LL+   ++ I  + 
Sbjct: 371 SKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDT 430

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
           + YN++  A GR                  K+ +++         D+ E  + D     +
Sbjct: 431 IMYNTVFTALGR-----------------LKQVSHI--------HDLYEKMKQDGPPPDI 465

Query: 605 FGQ--LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
           F    L++     G+ ++  +        +F+++     +P+V+++++++N   +    +
Sbjct: 466 FTYNILISSYGRAGRVDSAVK--------IFEELENSNCQPDVISYNSLINCLGKNGDVD 517

Query: 663 DASMLLEELRLFDNQVYGVAHGLLM---GYRDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
           +A M  +E++        V +  L+   G  D + + A SLFDE+     S     YN L
Sbjct: 518 EAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEM-ACSLFDEMIAEGCSPNLVTYNIL 576

Query: 720 TDMLWHFGQKRGAQLVVLEGKRRQ 743
            D L   G  R A+ V L  K +Q
Sbjct: 577 LDCLERSG--RTAEAVDLYAKLKQ 598



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 102/237 (43%), Gaps = 39/237 (16%)

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           RFE+   +  +ME  G++    T N L+G +G      ++ R    +K   +  N  +Y 
Sbjct: 139 RFEQTESLLDDMEKRGVKGSISTVNILIGFFG------DLDRCVGLVKKWGLRFNAYSYK 192

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            L+  Y +     +A  ++ +  + G   D+  ++ L+DAL K+  V+ A  + ++M + 
Sbjct: 193 CLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRR 252

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES-ANLDAMCSQDDKDVQEAGRT 597
              P+  TY  +I   G++              GK  ES A   AM         E G T
Sbjct: 253 HCEPDTFTYTIMIRMTGKA--------------GKTDESLALFQAML--------EKGFT 290

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
            N I   +  ++ E   +G+  ++        + +F KM +   +PN  T+S +LN 
Sbjct: 291 LNLI--AYNTMI-EALAKGRMADKA-------VLLFSKMVENGCQPNEFTYSVLLNV 337


>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 962

 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 190/362 (52%), Gaps = 3/362 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I++  +LGKV  A  + +   + G  + +  +S LI+ + +      A ++F  + +  
Sbjct: 492 LINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDG 551

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           +KP++V YN +I A CG G +D    V    +M +   +P   TF  ++   +R G  + 
Sbjct: 552 IKPDVVLYNNIITAFCGMGKMD--RAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKK 609

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A ++F+ M   G    + TYN L+  + +  +M+ A +I+ EM    +SPN  TY+T++ 
Sbjct: 610 ALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMH 669

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GYA  G    A   F++++  G+ LD  +Y  +L    K GR + AL V KEM +  I +
Sbjct: 670 GYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPR 729

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +   YN L+ G+ ++G   E   + +QMK + V P++ TY++ I+  SK G  + A +  
Sbjct: 730 NTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTI 789

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E K  G+K +V  Y+ LI+   +  L E A+S  +EM   G++P+   Y+ ++ +    
Sbjct: 790 EEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSR 849

Query: 558 AT 559
           AT
Sbjct: 850 AT 851



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 142/571 (24%), Positives = 257/571 (45%), Gaps = 39/571 (6%)

Query: 172 WSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAF 231
           W   +  F   +K+  RK         M++   R G +  A+  FE     G   + + +
Sbjct: 296 WQAVVSAFE-RIKKPSRKE-----YGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVY 349

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           + LI AY      +EA+S    MK   ++ +LVTY+ ++    K G + +     F +  
Sbjct: 350 TNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTG-NAESADHWFQEAK 408

Query: 292 RNGVQPDRITF-NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
                 + I + N + A C R  + + A  L  EM   GID  I  Y+T++D        
Sbjct: 409 EKHSSLNAIIYGNIIYAYCQRCNM-DKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDE 467

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           D    +        ++P+V+TY  +I+ YAK G++  AL +  EM+  GI  +  +Y+ +
Sbjct: 468 DKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSML 527

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           ++ + KL  +  A  + +++   GI+ D V YN ++  +   GK D      ++M+    
Sbjct: 528 INGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRH 587

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            P   T+  +I  +++ G  K+A+ +F   + +G    V  Y+ALI  L +   +E A  
Sbjct: 588 KPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQ 647

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATT--ECTVDDVERDLGKQKESANLDAMCSQDD 588
           +LDEMT  G+ PN  TY +I+  +     T    T     RD G Q +    +A+     
Sbjct: 648 ILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALL---- 703

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC-----------RQEILCILGVFQKMH 637
           K   ++GR  + +      +  E + Q    N             R +I     + Q+M 
Sbjct: 704 KACCKSGRMQSAL-----AVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMK 758

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYGVAHGLLMGY-RDN 692
           +  ++P++ T+++ +NACS+    + A+  +EE++      + + Y     L+ G+ R +
Sbjct: 759 REGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTT---LINGWARAS 815

Query: 693 IWVQALSLFDEVKLMDSSTASAFYNALTDML 723
           +  +ALS F+E+KL       A Y+ L   L
Sbjct: 816 LPEKALSCFEEMKLSGLKPDRAVYHCLMTSL 846


>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
 gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 178/330 (53%), Gaps = 1/330 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  ++ LI  +G SG   E   +F  M    +K ++  Y  VI+   K G + K    +F
Sbjct: 1   VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIG-NTKRAFALF 59

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           D++   G+  +  T+ +L+    + G  EAA  L NEM  RG+D +   YNTL+D  CK 
Sbjct: 60  DELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKR 119

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             +D AF++   M  K    ++ T +T+ DG  K  + ++A      M   G+  + VSY
Sbjct: 120 GLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSY 179

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
            T++ IY K G F EA  + +EM+ +G   +AVTYN L+ G+ K+G+  E   + ++M+A
Sbjct: 180 TTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRA 239

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + P++ TY++L+      G   +A+++F E +Q GL  +VV Y+A+I  L K G  E 
Sbjct: 240 KGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEE 299

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           A  L DEMT+ G+ P+   Y S++ +  ++
Sbjct: 300 AFKLYDEMTEAGLTPDDRVYTSLVSSLHKA 329



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 161/299 (53%), Gaps = 1/299 (0%)

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           + TY  +ID  G  G     V  +F++M   G++ D   +  ++    + G  + A  LF
Sbjct: 1   VATYTLLIDWHGSSG-KIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALF 59

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           +E+  +G+  ++ TY  L+D +CK  +M+ A  ++ EM  + +  N + Y+T+IDGY K 
Sbjct: 60  DELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKR 119

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G +D+A  +   M+  G   D  + NT+     KL + EEA      M   G+  + V+Y
Sbjct: 120 GLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSY 179

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             L+  Y K+G + E +++F++MK     PN +TY+ LID +SK G  KEA ++  E + 
Sbjct: 180 TTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRA 239

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            G+  D+  Y++L+   C  G ++ AV L +E+ ++G+  NVVTY +II    +   +E
Sbjct: 240 KGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSE 298



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 176/325 (54%), Gaps = 1/325 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I   G  GK+D  + +FE    +G    ++ ++ +I+   + G  + A ++F+ +  
Sbjct: 5   TLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTE 64

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L  N+ TY A+ID   K G + +    + ++M   G+  +++ +N+L+    + GL +
Sbjct: 65  KGLVANVHTYGALIDGVCKAG-EMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLID 123

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +   M  +G + DI+T NT+ D + K  Q + A   +  M  K + PNVV+Y+T+I
Sbjct: 124 EAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLI 183

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y K G   +A  +F EMK  G   + V+YN ++  ++K GR +EA  +  EM + GI 
Sbjct: 184 DIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIF 243

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  TY +LL G    GK D+   +F +++   +  N++TY+ +I   SK G  +EA ++
Sbjct: 244 PDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKL 303

Query: 497 FREFKQAGLKADVVLYSALIDALCK 521
           + E  +AGL  D  +Y++L+ +L K
Sbjct: 304 YDEMTEAGLTPDDRVYTSLVSSLHK 328



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 140/306 (45%), Gaps = 35/306 (11%)

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           V TY+ +ID +  +G++D+   MF EM   GI  D   Y  V++   K+G  + A  +  
Sbjct: 1   VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
           E+   G+  +  TY AL+ G  K G+ +    +  +M+   +  N L Y+TLID Y K G
Sbjct: 61  ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
           L  EA ++    ++ G + D+   + + D L K    E A   L  M ++G+ PNVV+Y 
Sbjct: 121 LIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYT 180

Query: 549 SIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
           ++ID + +               G   E+  L        +++++AG   N +   +  L
Sbjct: 181 TLIDIYCKE--------------GNFVEAKKLF-------QEMKKAGGEPNAV--TYNVL 217

Query: 609 VA--EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
           +    K G+ K+    R E          M    I P++ T++++L+        +DA  
Sbjct: 218 IDGHSKKGRMKEAYELRDE----------MRAKGIFPDIYTYTSLLHGECIFGKLDDAVE 267

Query: 667 LLEELR 672
           L  E+R
Sbjct: 268 LFNEVR 273



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 3/181 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L +L + + AK    T + +G    V +++ LI  Y + G   EA  +F  MK+   +PN
Sbjct: 151 LRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPN 210

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
            VTYN +ID   K G   K   E+ D+M   G+ PD  T+ SLL   C  G L +A   L
Sbjct: 211 AVTYNVLIDGHSKKG-RMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVE-L 268

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           FNE+  +G+  ++ TY  ++  + K  + + AF++  EM    ++P+   Y++++    K
Sbjct: 269 FNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSLHK 328

Query: 382 A 382
           A
Sbjct: 329 A 329



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 132/286 (46%), Gaps = 38/286 (13%)

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY+ LID +   G   E  ++F E  + G+KAD+ +Y+ +I+  CK G  + A +L DE+
Sbjct: 3   TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
           T++G+  NV TY ++ID   ++                + E+A +         ++Q  G
Sbjct: 63  TEKGLVANVHTYGALIDGVCKAG---------------EMEAAEILV------NEMQTRG 101

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
              NQ+I  +  L+     +G  +   + +++        M K   + ++ T + I +  
Sbjct: 102 LDVNQLI--YNTLIDGYCKRGLIDEAFKVQVI--------MEKKGFENDIYTLNTIADGL 151

Query: 656 SRCNSFEDASMLLEELRLFDNQVYG--VAHGLLMGY--RDNIWVQALSLFDEVKLMDSST 711
            + N  E+A   L  L + +  V    V++  L+    ++  +V+A  LF E+K      
Sbjct: 152 RKLNQPEEAKRWL--LTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEP 209

Query: 712 ASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLH 757
            +  YN L D     G+ + A  +  E + + ++ ++++ + L LH
Sbjct: 210 NAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSL-LH 254


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 222/469 (47%), Gaps = 35/469 (7%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G +  A+ +      +G   T   ++ L+SA+ R G+ ++A  V  SM  Y  +P+L 
Sbjct: 255 RKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLR 314

Query: 265 TYNAV-IDACGKGGVDFKHVVEIFDDMLR-NGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           TYN + +  C  G VD      + D+M R +   PD +T+N+L+  C +      A  L 
Sbjct: 315 TYNVLAVGLCQAGKVD--EAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLL 372

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            EM  +G+   + T+N ++ ++CK  +++ A   + ++  + ++P+V+TY+T+ID Y KA
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA 432

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G +  A  +  EM   G+ +D  + NTVL    K+ R+E+A  +       G   D V+Y
Sbjct: 433 GNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSY 492

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             ++  Y K+   +   R+++QM    + P++ TY+TLI    +    KEA+    E  +
Sbjct: 493 GTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVE 552

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
            GL  D   Y+ +I A CK G +E+A    ++M +   +P+VVT N++++         C
Sbjct: 553 KGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGL-------C 605

Query: 563 TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
                            LD      +  V++  + D   +  +  L+      G      
Sbjct: 606 L-------------HGKLDKALKLFESWVEKGKKVD---VITYNTLIQSMCKVG------ 643

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             ++   L  F  M    ++P+  T++ +L+A S     E+A  +L +L
Sbjct: 644 --DVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKL 690



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 149/568 (26%), Positives = 255/568 (44%), Gaps = 49/568 (8%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYC--QEAISVF 251
           LA A +S   RL    LA  +  +     G   ++ A +A++SA  RS     Q ++ VF
Sbjct: 137 LADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVF 196

Query: 252 NSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCS 310
            S+    L PN  T+N ++   C KG       +     M   G+ PD +T+N+LL    
Sbjct: 197 RSLIELRLHPNHYTFNLLVHTHCSKGT--LADALATLSTMQGFGLSPDAVTYNTLLNAHC 254

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           R G+   AR L   M   GI     TYNTL+ A  +   +  A +++  M A    P++ 
Sbjct: 255 RKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLR 314

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL-DRVSYNTVLSIYAKLGRFEEALLVCKE 429
           TY+ +  G  +AG++D+A  +  EM+ L   L D V+YNT++    K     +AL + +E
Sbjct: 315 TYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEE 374

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M   G++   VT+N ++    K+GK +E     E++  + ++P+++TY+TLID Y K G 
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
             +A  +  E    GLK D    + ++  LCK    E A  LL    + G  P+ V+Y +
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494

Query: 550 IIDAFGRSATTECTV----DDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIK 603
           ++ A+ +    E  +      +ER L     + N  +  +C  +   ++EA    N++++
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMER--LKEAIDKLNELVE 552

Query: 604 --------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
                    +  ++     +G  EN  R           KM +   KP+VVT + ++N  
Sbjct: 553 KGLVPDETTYNIIIHAYCKEGDLENAFR--------FHNKMVENSFKPDVVTCNTLMNGL 604

Query: 656 SRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQ----------ALSLFDEVK 705
                 + A      L+LF++ V       ++ Y  N  +Q          AL  FD+++
Sbjct: 605 CLHGKLDKA------LKLFESWVEKGKKVDVITY--NTLIQSMCKVGDVDTALHFFDDME 656

Query: 706 LMDSSTASAFYNALTDMLWHFGQKRGAQ 733
           +      +  YN +   L   G+   A 
Sbjct: 657 VKGLQPDAFTYNVVLSALSEAGRSEEAH 684



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 159/328 (48%), Gaps = 1/328 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + E   ++G   T+   + ++ +  + G  +EA+     +    L P+++TYN +ID
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           A  K G +      + D+M+  G++ D  T N++L    +   +E A  L +    RG  
Sbjct: 428 AYCKAG-NVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFV 486

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  +Y T++ A  K    + A  +  +M  + + P++ TY+T+I G  +  RL +A++ 
Sbjct: 487 PDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDK 546

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
            +E+   G+  D  +YN ++  Y K G  E A     +M  +  + D VT N L+ G   
Sbjct: 547 LNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCL 606

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            GK D+  ++FE         +++TY+TLI    K G    A+  F + +  GL+ D   
Sbjct: 607 HGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFT 666

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEG 539
           Y+ ++ AL + G  E A ++L ++   G
Sbjct: 667 YNVVLSALSEAGRSEEAHNMLHKLADSG 694



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 190/419 (45%), Gaps = 42/419 (10%)

Query: 177 QCFAFAVKREERKNDQGKLAS-----AMISILGRLGKVDLAKNIFETALNEGYGNTVYAF 231
           +C + A++  E   D+G   +      ++  L + GK++ A    E    EG    V  +
Sbjct: 363 RCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITY 422

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           + LI AY ++G   +A ++ + M    LK +  T N V+    K    ++   E+     
Sbjct: 423 NTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMK-RYEDAEELLHSPP 481

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
           + G  PD +++ +++A   +    E A  L+++M+ R +   I TYNTL+  +C+  ++ 
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A + + E+  K + P+  TY+ +I  Y K G L++A    ++M       D V+ NT++
Sbjct: 542 EAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           +     G+ ++AL + +     G + D +TYN L+    K G  D     F+ M+   + 
Sbjct: 602 NGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQ 661

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG----------LK------ADVV----- 510
           P+  TY+ ++   S+ G  +EA  +  +   +G          LK      ADV      
Sbjct: 662 PDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGK 721

Query: 511 ---------------LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
                           Y   ++ LC  G ++ A ++LDEM ++G+  +  TY ++++  
Sbjct: 722 PEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGL 780



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 150/321 (46%), Gaps = 4/321 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L ++ + + A+ +  +    G+     ++  +++AY +    + A+ +++ M    L P+
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
           + TYN +I    +     K  ++  ++++  G+ PD  T+N ++ A C  G L  A R  
Sbjct: 524 ISTYNTLIKGLCRME-RLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFR-F 581

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            N+MV      D+ T NTL++ +C   ++D A ++      K    +V+TY+T+I    K
Sbjct: 582 HNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCK 641

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G +D AL+ F +M+  G+  D  +YN VLS  ++ GR EEA  +  ++  SG    +  
Sbjct: 642 VGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFA 701

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL-TYSTLIDVYSKGGLYKEAMQIFREF 500
              L      +    E     E   ++    N L TY   ++    GG  KEA  +  E 
Sbjct: 702 CPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEM 761

Query: 501 KQAGLKADVVLYSALIDALCK 521
            Q G+  D   Y  L++ L K
Sbjct: 762 MQKGMPVDSSTYITLMEGLIK 782


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 189/358 (52%), Gaps = 5/358 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+   R  ++D A  + +   N+G+   +  ++ LI +    G    A+   N + +
Sbjct: 130 NAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLK 189

Query: 257 YNLKPNLVTYNAVIDACG-KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            N KP +VTY  +I+A   +GG+D    +++ D+ML   +QPD  T+NS++    R G  
Sbjct: 190 ENCKPTVVTYTILIEATLLQGGID--EAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYV 247

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  + + +  +G   D+ TYN LL  +    + +  +E+M++M A+    NVVTYS +
Sbjct: 248 DRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVL 307

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I    + G++++ + +  +MK  G+  D   Y+ +++   K GR + A+ V   M S G 
Sbjct: 308 ISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGC 367

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D V YN +L    KQ + DE   +FE++     SPN  +Y+++       G    A+ 
Sbjct: 368 VPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALG 427

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG--IRPNVVTYNSII 551
           +  E    G+  D + Y++LI  LC++G+V+ A+ LL +M  E    +P+VV+YN ++
Sbjct: 428 MILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVL 485



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 213/423 (50%), Gaps = 27/423 (6%)

Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETAL 220
           + LR L N+G     + C                  + +I  L     +D A  +     
Sbjct: 78  YFLRHLVNKGHKPDVVLC------------------TKLIHGLFTSKTIDKAIQVMHILE 119

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD 279
           N G+ + + A++A+I+ + R+     A  V + MK     P++VTYN +I + C +G +D
Sbjct: 120 NHGHPDLI-AYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLD 178

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
               +E  + +L+   +P  +T+  L+ A   +GG+ EA + L +EM+   +  D+FTYN
Sbjct: 179 --SALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMK-LLDEMLEINLQPDMFTYN 235

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +++  +C+   +D AF+I++ + +K  +P+V+TY+ ++ G    G+ +    + S+M   
Sbjct: 236 SIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVAR 295

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   + V+Y+ ++S   + G+ EE + + K+M+  G++ D   Y+ L+    K+G+ D  
Sbjct: 296 GCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLA 355

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + + M +D   P+++ Y+T++    K     EA+ IF +  + G   +   Y+++  A
Sbjct: 356 IEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSA 415

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD---DVERDLGKQK 575
           L   G    A+ ++ EM  +G+ P+ +TYNS+I    R    +  ++   D+E +  + K
Sbjct: 416 LWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECK 475

Query: 576 ESA 578
            S 
Sbjct: 476 PSV 478



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 185/397 (46%), Gaps = 38/397 (9%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           +L N   PD I +N+++    R    ++A  + + M ++G   DI TYN L+ ++C    
Sbjct: 117 ILENHGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGM 176

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A E   ++  +N  P VVTY+ +I+     G +D+A+ +  EM  + +  D  +YN+
Sbjct: 177 LDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNS 236

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    + G  + A  +   + S G   D +TYN LL G   QGK++    +   M A  
Sbjct: 237 IIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARG 296

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
              N++TYS LI    + G  +E + + ++ K+ GLK D   Y  LI ALCK G V+ A+
Sbjct: 297 CEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAI 356

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKESANLDAMCS-- 585
            +LD M  +G  P++V YN+I+    +    +  +   E+  ++G    +++ ++M S  
Sbjct: 357 EVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSAL 416

Query: 586 ---------------QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL--- 627
                            DK V   G T N +I                   CR  ++   
Sbjct: 417 WSTGHKVRALGMILEMLDKGVDPDGITYNSLISCL----------------CRDGMVDEA 460

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
             L V  +M   + KP+VV+++ +L    + +   DA
Sbjct: 461 IELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDA 497



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 142/299 (47%), Gaps = 3/299 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  + R G VD A  I  +  ++GY   V  ++ L+      G  +    + + M  
Sbjct: 235 NSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVA 294

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              + N+VTY+ +I +  + G   +  V +  DM + G++PD   ++ L+A   + G  +
Sbjct: 295 RGCEANVVTYSVLISSVCRDG-KVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVD 353

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  + + M+  G   DI  YNT+L  +CK  + D A  I  ++     SPN  +Y++M 
Sbjct: 354 LAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMF 413

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA--LLVCKEMESSG 434
                 G    AL M  EM   G+  D ++YN+++S   + G  +EA  LLV  EMESS 
Sbjct: 414 SALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSE 473

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            +   V+YN +L G  K  +  +   +   M      PN  TY+ LI+    GG   +A
Sbjct: 474 CKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDA 532



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 148/338 (43%), Gaps = 45/338 (13%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LLR L N+G+W    +  +  V R                                 
Sbjct: 269 YNILLRGLLNQGKWEAGYELMSDMVAR--------------------------------- 295

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
               G    V  +S LIS+  R G  +E + +   MK+  LKP+   Y+ +I A C +G 
Sbjct: 296 ----GCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGR 351

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           VD    +E+ D M+ +G  PD + +N++LA   +    + A ++F ++   G   +  +Y
Sbjct: 352 VDL--AIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSY 409

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N++  A+        A  ++ EM  K + P+ +TY+++I    + G +D+A+ +  +M+ 
Sbjct: 410 NSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEM 469

Query: 398 LG--IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
                    VSYN VL    K+ R  +A+ V   M   G R +  TY  L+ G G  G  
Sbjct: 470 ESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCL 529

Query: 456 DEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKE 492
           ++ R +   +   D +S +  ++  L   + K  +Y++
Sbjct: 530 NDARDLATTLVNMDAISEH--SFERLYKTFCKLDVYRQ 565



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/397 (22%), Positives = 176/397 (44%), Gaps = 36/397 (9%)

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK    + +   +  +  K   P+VV  + +I G   +  +D A+ +   ++  G   D 
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDL 126

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           ++YN +++ + +  R + A  V   M++ G   D VTYN L+G    +G  D       Q
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           +  +   P ++TY+ LI+     G   EAM++  E  +  L+ D+  Y+++I  +C+ G 
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           V+ A  ++  ++ +G  P+V+TYN ++                   L + K  A  + M 
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGL----------------LNQGKWEAGYELM- 289

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
                D+   G   N +   +  L++     GK E          +G+ + M K  +KP+
Sbjct: 290 ----SDMVARGCEANVV--TYSVLISSVCRDGKVEEG--------VGLLKDMKKKGLKPD 335

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG---LLMGYRDNIWVQALSLF 701
              +  ++ A  +     D ++ + ++ + D  V  + +    L    +     +ALS+F
Sbjct: 336 GYCYDPLIAALCK-EGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIF 394

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           +++  +  S  ++ YN++   LW  G K  A  ++LE
Sbjct: 395 EKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILE 431


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 207/430 (48%), Gaps = 12/430 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  + R L   GE  +A +     +      +  G   S +  +L R G+++    +   
Sbjct: 374 YNLIARALCKEGEMERAERILEEMLSTGMTIH-SGLFNSVVAGLLQRTGRLESVVRLISE 432

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +  G        +A      +    QEA+ ++  M    L  N+ T NA+I    +G  
Sbjct: 433 MVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGK- 491

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           + K   E+   M+  G++ D IT+N ++  C +    E A  L ++M+ +G   D + +N
Sbjct: 492 NMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFN 551

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +++ A C   +M+ A  ++ +M  + + P+VV+Y T+IDGY KA  +  A    +E+   
Sbjct: 552 SIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMAC 611

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  + V YN ++  Y + G    A+ V   MES GI+   VTY +L+      G  DE 
Sbjct: 612 GLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEA 671

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
           + MFEQ + + +   ++ Y+ +I    K G   EAM  F E +   +  + + Y+ L+ A
Sbjct: 672 KTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYA 731

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
            CK+G  E A  L DEM   GI P+ V+YN+++  F +       VD +++ + K   +A
Sbjct: 732 YCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQ-------VDSLDKAIEK---AA 781

Query: 579 NLDAMCSQDD 588
            + ++ +Q+D
Sbjct: 782 EISSIMTQND 791



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 240/537 (44%), Gaps = 47/537 (8%)

Query: 142 LGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           L D++     +  GA  Y  L+  L   G   +AI        R + + ++ ++A +M++
Sbjct: 252 LSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAI--------RLKGRMEESRVAPSMVT 303

Query: 202 ILGRLGKVDLAKNIFETAL----NEGYGNTVYAF--SALISAYGRSGYCQEAISVFNSMK 255
               +  +  +    E        EG G T      + LI  + R G+  EAI +F+ M 
Sbjct: 304 FGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMV 363

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGL 314
              +K   VTYN +  A  K G + +    I ++ML  G+      FNS++A +  R G 
Sbjct: 364 SKEMKSTAVTYNLIARALCKEG-EMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGR 422

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E+   L +EMV RG+  +          +C+G +   A  I  +M  K +  N+ T + 
Sbjct: 423 LESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNA 482

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I G  +   +  A  +   M   G+ LD ++YN ++    K  + EEAL +  +M   G
Sbjct: 483 LIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKG 542

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
            + DA  +N+++  Y   GK +E   +  QMK + V P++++Y T+ID Y K    ++A 
Sbjct: 543 FKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKAN 602

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +   E    GLK + V+Y+ALI    +NG +  A+ +LD M   GI+P  VTY S++   
Sbjct: 603 EYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWM 662

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
             +      VD+ +              M  Q  K+  E G     I      ++     
Sbjct: 663 CHAGL----VDEAK-------------TMFEQSRKNSIEVGVVGYTI------MIQGLCK 699

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            GK +          +  F++M    I PN +T++ ++ A  +  + E+AS L +E+
Sbjct: 700 IGKMDEA--------MNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEM 748



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 132/572 (23%), Positives = 244/572 (42%), Gaps = 102/572 (17%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY-NLKPNLVT 265
           G + LA + F    +     +V   +AL+ A  R+G       VF+ M+    + PN  +
Sbjct: 172 GSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYS 231

Query: 266 YNAVIDA-CGKGGVD--FKHVVEIFDDMLRNGVQPDR--ITFNSLL-AVCSRGGLWEAAR 319
           Y ++I A C  G VD  FK    I  D++  G+Q     + +N L+ A+C  G + EA R
Sbjct: 232 YTSMIKALCKVGKVDDGFK----ILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIR 287

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            L   M    +   + T+  L++ + +  +      ++ EM    I+PN V  + +ID +
Sbjct: 288 -LKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWH 346

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            + G   +A+ +F EM    +    V+YN +     K G  E A  + +EM S+G+   +
Sbjct: 347 CRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHS 406

Query: 440 VTYNALLGG-YGKQGKYDEVRRMFEQMKADCVSP-------------------------- 472
             +N+++ G   + G+ + V R+  +M    + P                          
Sbjct: 407 GLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWL 466

Query: 473 ---------NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
                    N+ T + LI    +G   K A ++ R     G++ D + Y+ +I   CK+ 
Sbjct: 467 KMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDS 526

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL--- 580
            +E A+ L D+M ++G +P+   +NSII A+       C       DLGK +E+ +L   
Sbjct: 527 KIEEALKLRDDMIRKGFKPDAYMFNSIIHAY-------C-------DLGKMEEALHLLGQ 572

Query: 581 -----------------DAMCSQDDKDVQEAGRTDNQIIK--------VFGQLVAEKAGQ 615
                            D  C    KD+Q+A    N+++         ++  L+    G 
Sbjct: 573 MKIEGVQPDVVSYGTIIDGYCKA--KDIQKANEYLNELMACGLKPNAVIYNALI---GGY 627

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 675
           G+  N     I   +GV   M  + I+P  VT+ ++++        ++A  + E+ R   
Sbjct: 628 GRNGN-----ISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNS 682

Query: 676 NQVYGVAHGLLMGYRDNI--WVQALSLFDEVK 705
            +V  V + +++     I    +A++ F+E++
Sbjct: 683 IEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMR 714



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 123/235 (52%), Gaps = 1/235 (0%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           LGK++ A ++      EG    V ++  +I  Y ++   Q+A    N +    LKPN V 
Sbjct: 560 LGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVI 619

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           YNA+I   G+ G +    + + D M   G+QP  +T+ SL+      GL + A+ +F + 
Sbjct: 620 YNALIGGYGRNG-NISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQS 678

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
               I+  +  Y  ++  +CK  +MD A     EM +++I PN +TY+T++  Y K+G  
Sbjct: 679 RKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNN 738

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           ++A  +F EM   GI  D VSYNT+++ ++++   ++A+    E+ S   + D +
Sbjct: 739 EEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISSIMTQNDCL 793



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 131/255 (51%), Gaps = 4/255 (1%)

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           +  N+ +   +RG L   A + F+ +  R     + T N LL+A+ +   +    ++  E
Sbjct: 160 LLINTCVTSSARGSL-RLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDE 218

Query: 360 M-PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI--GLDRVSYNTVLSIYAK 416
           M   K ++PN  +Y++MI    K G++DD   + S++   G+      V YN ++    K
Sbjct: 219 MRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCK 278

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
            GR +EA+ +   ME S +    VT+  L+ G  +  ++ EV  +  +M+   ++PN + 
Sbjct: 279 SGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVI 338

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
            + LID + + G + EA+++F E     +K+  V Y+ +  ALCK G +E A  +L+EM 
Sbjct: 339 CNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEML 398

Query: 537 KEGIRPNVVTYNSII 551
             G+  +   +NS++
Sbjct: 399 STGMTIHSGLFNSVV 413



 Score = 46.2 bits (108), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 114/279 (40%), Gaps = 57/279 (20%)

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           L  +T +   ++G L + A+  F           V   +AL++AL + G + +   + DE
Sbjct: 160 LLINTCVTSSARGSL-RLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDE 218

Query: 535 MTK-EGIRPNVVTYNSIIDAFGRSATTECTVDD---VERDL---GKQKESAN------LD 581
           M   + + PN  +Y S+I A  +       VDD   +  DL   G Q+ +        +D
Sbjct: 219 MRDCKTVTPNGYSYTSMIKALCKVGK----VDDGFKILSDLIHAGLQQSAGAVPYNLLMD 274

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
           A+C        ++GR D + I++ G                            +M + ++
Sbjct: 275 ALC--------KSGRVD-EAIRLKG----------------------------RMEESRV 297

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALS 699
            P++VTF  ++N   R + F +   LL E+         V    L+ +  R   + +A+ 
Sbjct: 298 APSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIR 357

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           LFDE+   +  + +  YN +   L   G+   A+ ++ E
Sbjct: 358 LFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEE 396


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 199/396 (50%), Gaps = 3/396 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +L      G   +A++  +   +R    ND     + +++ L + G+++ AK + E 
Sbjct: 218 YNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVT--YNVLVNGLSKKGELEQAKGLIEE 275

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            LN G   + Y ++ LI+ + + G   EA  +   M      P L TYN ++    K  V
Sbjct: 276 MLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKW-V 334

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
               V   F DML++   PD ++FNSLL    R G    A  LF+E+  R +   + TYN
Sbjct: 335 QVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYN 394

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+  +C    +D A  +  EM  + + P++ TY+ +++G  K G +  A   F+EM   
Sbjct: 395 TLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSK 454

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  DR +YNT +    K+     A  + +EM ++G   D +TYN  +    +QG ++E 
Sbjct: 455 GLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEA 514

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + E M +D + P+ +TY+++I+ + K G  ++A ++F E    G+   VV Y+ LI A
Sbjct: 515 CDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHA 574

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
                +++ A     +M ++ +  NV+TYN+II+  
Sbjct: 575 HAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGL 610



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 135/517 (26%), Positives = 237/517 (45%), Gaps = 44/517 (8%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           AKN++      G   TV  ++ ++ +Y + G   +A+ + + M+     PN VTYN +++
Sbjct: 199 AKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVN 258

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              K G + +    + ++ML +G+     T+N L+    + GL+  A +L  EMV+R   
Sbjct: 259 GLSKKG-ELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF 317

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
             + TYNTL+  +CK  Q+       ++M     +P++V++++++ GY + G + +A  +
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F E+K   +    ++YNT++      G  + AL + KEM   G+  D  TY  L+ G  K
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G     R  F +M +  + P+   Y+T I    K      A  +  E   AG   DV+ 
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVIT 497

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           Y+  + ALC+ G  E A  LL+ M  +G+ P+ VTY SII+ F ++             L
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNG-----------HL 546

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
            K +E  N         K V  +  T   +I                 +  +Q +     
Sbjct: 547 RKAREVFN-----EMLSKGVAPSVVTYTVLIHA---------------HAAKQMLDLAFM 586

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMG 688
            F KM +  +  NV+T++AI+N        ++A    +E+    +  N+    ++ +L+ 
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNK---FSYTILIN 643

Query: 689 YRDNI--WVQALSLFDEV---KLM-DSSTASAFYNAL 719
              N+  W +AL L+ E+   K+  DS T S F   L
Sbjct: 644 ESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 147/268 (54%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +FD M+RNG+ PD    N +L V     L   A+N++  M   GI   + TYNT+LD+ C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  ++D A E+++EM  +   PN VTY+ +++G +K G L+ A  +  EM   G+ +   
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +YN +++ + + G F EA  + +EM +        TYN L+ G  K  +   VR  F  M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
                +P+++++++L+  Y + G   EA  +F E K   L   V+ Y+ LI  LC  G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           ++A+ L  EMT +G+ P++ TY  +++ 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNG 434



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 9/217 (4%)

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
           F +  +LD +     M  A+ +M  + +  +   V     +I G+         L +F +
Sbjct: 120 FVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVV---DVLIAGHVXC------LLVFDK 170

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G+  D  + N +L +        +A  V   ME  GI+   VTYN +L  Y K+G+
Sbjct: 171 MIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGR 230

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            D+   +  +M+     PN +TY+ L++  SK G  ++A  +  E   +GL      Y+ 
Sbjct: 231 VDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNP 290

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           LI+  C+ GL   A  L++EM      P + TYN+++
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLM 327



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 119/275 (43%), Gaps = 37/275 (13%)

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
            LLV  +M  +G+  D    N +L     +    + + ++  M+   + P ++TY+T++D
Sbjct: 164 CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLD 223

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            Y K G   +A+++  E ++ G   + V Y+ L++ L K G +E A  L++EM   G+  
Sbjct: 224 SYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNV 283

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII 602
           +  TYN +I+ F +        D VE       E  N  A  +    +    G    + +
Sbjct: 284 SAYTYNPLINGFCQKGLFVEAFDLVE-------EMVNRRAFPTLSTYNTLMYGLC--KWV 334

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
           +V G              R R         F  M K K  P++V+F+++L    R     
Sbjct: 335 QVTGV-------------RLR---------FSDMLKSKFTPDIVSFNSLLYGYCRTGCIS 372

Query: 663 DASMLLEELRLFD-----NQVYGVAHGLLM-GYRD 691
           +A +L +EL+  D          + HGL M GY D
Sbjct: 373 EAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLD 407



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 3/155 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I+   + G +  A+ +F   L++G   +V  ++ LI A+        A   F+ M  
Sbjct: 534 TSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLE 593

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            ++  N++TYNA+I+  C    +D     + FD+M   G+ P++ ++  L+      G W
Sbjct: 594 KSVPANVITYNAIINGLCMTRRMD--EAYKYFDEMEEKGILPNKFSYTILINESCNMGYW 651

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           E A  L+ EM+ R I  D FT++  L  + +  Q+
Sbjct: 652 EEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQV 686


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 237/496 (47%), Gaps = 38/496 (7%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           Y  +L      GE  +A+       K +ER     ++  + +I+ L + G++  AK + +
Sbjct: 240 YNTMLHSFCKGGEVQRALD---LVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQ 296

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                G   + Y ++ LI  Y + G   EA++++  M    + P + ++N ++    K G
Sbjct: 297 EMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEG 356

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
                  +   DML+  + PD I++N+L+   C  G + EA   L +E+  R +  +I T
Sbjct: 357 -KMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFI-LLDELRFRNLSFNIVT 414

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YNTL+D +C+   ++ A ++  +M  + I P+VVTY+ +++G  K G +  A   F EM 
Sbjct: 415 YNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEML 474

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
            +G+  D+ +Y   +    KLG   +A  + +EM + G   D +TYN  + G  K G  +
Sbjct: 475 HVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLE 534

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E   + ++M  D   P+ +TY++ +  + + G  +E  +IF +    G    VV Y+ LI
Sbjct: 535 EAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLI 594

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
            A   NG ++ A++   EM ++G+ PNV+TYN +I+ F       C V            
Sbjct: 595 HAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGF-------CKV------------ 635

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
              +D  C +   ++QE G   N+    +  L+ E    GK +   R        ++ +M
Sbjct: 636 -RKMDQAC-KFFIEMQEKGIFPNKY--TYTILINENCNMGKWQEALR--------LYAQM 683

Query: 637 HKLKIKPNVVTFSAIL 652
              +I+P+  T  A+L
Sbjct: 684 LGKRIRPDSCTHGALL 699



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 223/468 (47%), Gaps = 46/468 (9%)

Query: 208 KVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           K  +A   F+  L + G+  + YAF A++     +   + A  V   +  + +       
Sbjct: 118 KPTIALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERIISFEMY------ 171

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
             ++D    G ++++ ++ +F+ M+RN   PD    N +L +     L   A  ++  M 
Sbjct: 172 -GIVDVLIGGYLNYQCLL-VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMG 229

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             GI   + TYNT+L + CKG ++  A +++ +M  +   P+ VT++ +I+G +K G L 
Sbjct: 230 EYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQ 289

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            A  +  EM   G+ +   +YN ++  Y K G   EAL + +EM + G+     ++N ++
Sbjct: 290 QAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIM 349

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G+ K+GK  + R+    M    + P++++Y+TLI  + + G   EA  +  E +   L 
Sbjct: 350 YGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLS 409

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            ++V Y+ LID LC+ G +E+A+ L ++M   GI P+VVTY  +++         C + +
Sbjct: 410 FNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNG-------ACKLGN 462

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI---IKVFGQLVAEKAGQGKKENRCR 623
           +               M  +   ++   G   +Q     ++ G+L   K G   K  + +
Sbjct: 463 M--------------LMAKEFFDEMLHVGLAPDQFAYTARIVGEL---KLGDTAKAFKLQ 505

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +E+L               P+V+T++  +N   +  + E+A  LL+++
Sbjct: 506 EEML----------TKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKM 543



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 221/476 (46%), Gaps = 29/476 (6%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +A+ V+  M  Y ++P + TYN ++ +  KGG + +  +++   M   G  P  +TFN L
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGG-EVQRALDLVPKMQERGCYPSEVTFNVL 278

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +   S+ G  + A+ L  EM   G+    +TYN L+   CK   +  A  +  EM  + +
Sbjct: 279 INGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGV 338

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           SP V +++T++ G+ K G++ DA    S+M    +  D +SYNT++  + +LG   EA +
Sbjct: 339 SPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFI 398

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           +  E+    +  + VTYN L+ G  + G  +   ++ E M    + P+++TY+ L++   
Sbjct: 399 LLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGAC 458

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G    A + F E    GL  D   Y+A I    K G    A  L +EM  +G  P+V+
Sbjct: 459 KLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVI 518

Query: 546 TYNSIIDAFGRSATTECTVDDVERDL--GKQKESANLDAM--CSQDDKDVQEA------- 594
           TYN  ++   +    E   + +++ +  G   +     +      ++  ++E        
Sbjct: 519 TYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDM 578

Query: 595 -GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
             R     +  +  L+   A  G+ +          +  F +M +  + PNV+T++ ++N
Sbjct: 579 LSRGQTPTVVTYTVLIHAHALNGRLD--------WAMAYFLEMQEKGVVPNVITYNVLIN 630

Query: 654 ACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGYRDNI--WVQALSLFDEV 704
              +    + A     E++   +F N+     + +L+    N+  W +AL L+ ++
Sbjct: 631 GFCKVRKMDQACKFFIEMQEKGIFPNK---YTYTILINENCNMGKWQEALRLYAQM 683



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 214/457 (46%), Gaps = 15/457 (3%)

Query: 144 DILKKFEFKLCGADDYTF--LLRELGNRGEWSKA---IQCFAFAVKREERKNDQGKLASA 198
           D++ K + + C   + TF  L+  L  +GE  +A   IQ  A A  R           + 
Sbjct: 258 DLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYT-----YNP 312

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I    + G +  A  ++E  +  G   TV + + ++  + + G   +A    + M + N
Sbjct: 313 LICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKN 372

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           L P++++YN +I   C  G +    +  + D++    +  + +T+N+L+    R G  E 
Sbjct: 373 LMPDIISYNTLIYGFCRLGNIGEAFI--LLDELRFRNLSFNIVTYNTLIDGLCRLGDLET 430

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  L  +M++RGI  D+ TY  L++  CK   M +A E   EM    ++P+   Y+  I 
Sbjct: 431 ALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIV 490

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K G    A  +  EM   G   D ++YN  ++   KLG  EEA  + ++M   G   
Sbjct: 491 GELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVP 550

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D VTY + +  + + G   E R +F  M +   +P ++TY+ LI  ++  G    AM  F
Sbjct: 551 DHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYF 610

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E ++ G+  +V+ Y+ LI+  CK   ++ A     EM ++GI PN  TY  +I+     
Sbjct: 611 LEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNM 670

Query: 558 ATTECTVDDVERDLGK--QKESANLDAMCSQDDKDVQ 592
              +  +    + LGK  + +S    A+  + DKD +
Sbjct: 671 GKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYK 707



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 177/370 (47%), Gaps = 37/370 (10%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A+      L +     + +++ LI  + R G   EA  + + ++  NL  N+VTY
Sbjct: 356 GKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTY 415

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N +ID   + G D +  +++ +DM+  G+ PD +T+  L+    + G    A+  F+EM+
Sbjct: 416 NTLIDGLCRLG-DLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEML 474

Query: 327 HRGI--DQ---------------------------------DIFTYNTLLDAICKGAQMD 351
           H G+  DQ                                 D+ TYN  ++ +CK   ++
Sbjct: 475 HVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLE 534

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A E++ +M      P+ VTY++ +  + + G L +   +F +M   G     V+Y  ++
Sbjct: 535 EAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLI 594

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
             +A  GR + A+    EM+  G+  + +TYN L+ G+ K  K D+  + F +M+   + 
Sbjct: 595 HAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIF 654

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           PN  TY+ LI+     G ++EA++++ +     ++ D   + AL+  L K+  V+ AV  
Sbjct: 655 PNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQ-AVQF 713

Query: 532 LDEMTKEGIR 541
           ++ +  +G R
Sbjct: 714 IESLILDGDR 723



 Score = 46.2 bits (108), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 54/262 (20%), Positives = 107/262 (40%), Gaps = 22/262 (8%)

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           ++DV   G L  + + +F +  +     DV   + ++  L    L+  A+ +   M + G
Sbjct: 173 IVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYG 232

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDV----ERDLGKQKESANLDAMCSQDDKDVQEAG 595
           IRP V TYN+++ +F +    +  +D V    ER     + + N+         ++Q+A 
Sbjct: 233 IRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAK 292

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC-ILGVFQKMHKLKIKPNVVTFSAILNA 654
               ++ K  G  V+           C++ +L   L ++++M    + P V + + I+  
Sbjct: 293 GLIQEMAKA-GLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYG 351

Query: 655 CSRCNSFEDASM---------LLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVK 705
             +     DA           L+ ++  ++  +YG      +G       +A  L DE++
Sbjct: 352 FCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIG-------EAFILLDELR 404

Query: 706 LMDSSTASAFYNALTDMLWHFG 727
             + S     YN L D L   G
Sbjct: 405 FRNLSFNIVTYNTLIDGLCRLG 426


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 193/363 (53%), Gaps = 1/363 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+   +LG   L+ +IF   L +GY  T   F+ LI      G+  +A+   + +    
Sbjct: 102 LINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQG 161

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
              + V+Y  +I+   K G      +++   +    VQP+ + +N ++    +  L   A
Sbjct: 162 FHLDQVSYGTLINGLCKVG-RITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDA 220

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            +L+++MV + I  D+FTYN L+      ++++ A ++  +M  +NI+PNV T++ ++DG
Sbjct: 221 FDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDG 280

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           + K G+++DA  + + M    I  D V+YN+++  Y  + +  +A  +   M S G+  +
Sbjct: 281 FCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIAN 340

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
              Y  ++ G+ K    DE   +FE+M+   + PN++TYS+LID   K G    A+++  
Sbjct: 341 VQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVD 400

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E    G   ++V YS+++DALCKN  V+ A++LL  +  +GIRP++ TY  +I    +S 
Sbjct: 401 EMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSG 460

Query: 559 TTE 561
             E
Sbjct: 461 RLE 463



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 171/316 (54%), Gaps = 7/316 (2%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGV-DFKHVVE 285
           V+ ++ALIS +        AI +FN MK+ N+ PN+ T+N ++D  C +G V D K V+ 
Sbjct: 236 VFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLA 295

Query: 286 IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           I   M+++ ++PD +T+NSL+   CS   +   A+++F+ M   G+  ++  Y T+++  
Sbjct: 296 I---MMKDDIKPDVVTYNSLMDGYCSINKV-NKAKDIFDSMASGGVIANVQIYTTMVNGF 351

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK   +D A  +  EM  + I PNVVTYS++IDG  K GR+  AL +  EM   G   + 
Sbjct: 352 CKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNI 411

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V+Y+++L    K    ++A+ +   ++  GIR D  TY  L+ G  + G+ ++ + +FE 
Sbjct: 412 VTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFED 471

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           +     + ++  Y+ +I  +   G + +A+ +  + +  G   +   Y  +I +L +   
Sbjct: 472 LLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDE 531

Query: 525 VESAVSLLDEMTKEGI 540
            ++A  LL EM   G+
Sbjct: 532 NDTAEKLLREMIVRGL 547



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 194/404 (48%), Gaps = 38/404 (9%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           +L     P    FN +L+   +      A +L  +M   GI+ D FT+N L++   +   
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
             L+F I A++  K   P  +T++T+I G    G +  AL+   ++   G  LD+VSY T
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +++   K+GR   AL + K ++   ++ +AV YN ++    K    ++   ++ QM A  
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + P++ TY+ LI  +S       A+ +F + K+  +  +V  ++ L+D  CK G V  A 
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAK 291

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESANLDAMCSQD 587
            +L  M K+ I+P+VVTYNS++D +       C+++ V   +D+     S  + A     
Sbjct: 292 VVLAIMMKDDIKPDVVTYNSLMDGY-------CSINKVNKAKDIFDSMASGGVIA----- 339

Query: 588 DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI------------LCILG---- 631
             +VQ      N   K+    + ++A    +E RCR+ I            LC LG    
Sbjct: 340 --NVQIYTTMVNGFCKI---KMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFY 394

Query: 632 ---VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
              +  +MH     PN+VT+S+IL+A  + +  + A  LL  L+
Sbjct: 395 ALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLK 438



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 176/355 (49%), Gaps = 3/355 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            +I+ L ++G++  A  + +    +        ++ +I    ++    +A  +++ M   
Sbjct: 171 TLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK 230

Query: 258 NLKPNLVTYNAVIDACGKGGVD-FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            + P++ TYNA+I   G   V    + +++F+ M +  + P+  TFN L+    + G   
Sbjct: 231 RICPDVFTYNALIS--GFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVN 288

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A+ +   M+   I  D+ TYN+L+D  C   +++ A +I   M +  +  NV  Y+TM+
Sbjct: 289 DAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMV 348

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G+ K   +D+A+N+F EM+   I  + V+Y++++    KLGR   AL +  EM   G  
Sbjct: 349 NGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQP 408

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + VTY+++L    K    D+   +   +K   + P++ TY+ LI    + G  ++A  +
Sbjct: 409 PNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNV 468

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           F +    G   DV  Y+ +I   C  G  + A++LL +M   G  PN  TY  +I
Sbjct: 469 FEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVI 523


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 139/548 (25%), Positives = 245/548 (44%), Gaps = 93/548 (16%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +I +  R+ + D+A +++           +Y+F+ LI  +        ++S F  + 
Sbjct: 109 CNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168

Query: 256 RYNLKPNLVTYNAVI------DACGKGGVDFKHVVE--------IFDDMLRNGVQPDRIT 301
           +   +P++VT+N ++      D   +    F ++VE        +FD M+  G+ P  IT
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228

Query: 302 FNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA-- 358
           FN+L+  +C  G + EAA  L N+MV +G+  D+ TY T+++ +CK      A  +++  
Sbjct: 229 FNTLINGLCLEGRVLEAAA-LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287

Query: 359 ---------------------------------EMPAKNISPNVVTYSTMIDGYAKAGRL 385
                                            EM  K I+PNV TY+ MIDG+   GR 
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            DA  +  +M    I  D +++N ++S   K G+  EA  +C EM    I  D VTYN++
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G+ K  ++D+ + MF+ M     SP+++T++T+IDVY +     E MQ+ RE  + GL
Sbjct: 408 IYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE---- 561
            A+   Y+ LI   C+   + +A  L  EM   G+ P+ +T N ++  F  +   E    
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523

Query: 562 ---------CTVDDVERDL-------GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
                      +D V  ++       G + + A  D  CS     V+   +T N +I  F
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA-WDLFCSLPIHGVEPDVQTYNVMISGF 582

Query: 606 -GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
            G+     A                  +F KM     +P+  T++ ++  C +    + +
Sbjct: 583 CGKSAISDANV----------------LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626

Query: 665 SMLLEELR 672
             L+ E+R
Sbjct: 627 IELISEMR 634



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 179/352 (50%), Gaps = 5/352 (1%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + SA+I  L + G    A+ +F   L +G    V+ ++ +I  +   G   +A  +   M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               + P+++T+NA+I A  K G  F+   ++ D+ML   + PD +T+NS++    +   
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           ++ A+++F+ M       D+ T+NT++D  C+  ++D   +++ E+  + +  N  TY+T
Sbjct: 417 FDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I G+ +   L+ A ++F EM   G+  D ++ N +L  + +  + EEAL + + ++ S 
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I  D V YN ++ G  K  K DE   +F  +    V P++ TY+ +I  +       +A 
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            +F + K  G + D   Y+ LI    K G ++ ++ L+ EM   G   +  T
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 185/396 (46%), Gaps = 36/396 (9%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           ++ FD M+R+      +  N ++ V  R    + A +L+ +M  R I  +I+++N L+  
Sbjct: 91  IDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKC 150

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C   ++  +     ++      P+VVT++T++ G     R+ +AL +F  M   G    
Sbjct: 151 FCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG---- 206

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
                           F EA+ +  +M   G+    +T+N L+ G   +G+  E   +  
Sbjct: 207 ----------------FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M    +  +++TY T+++   K G  K A+ +  + ++  +K DVV+YSA+ID LCK+G
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIID---AFGRSATTECTVDD-VERDLGKQKESAN 579
               A  L  EM ++GI PNV TYN +ID   +FGR +  +  + D +ER++     + N
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIK--VFGQLVAEKAGQGK--KENRCRQEILCILGVFQK 635
                S  +  + EA +  ++++   +F   V   +      K NR            + 
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA--------KH 422

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           M  L   P+VVTF+ I++   R    ++   LL E+
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 153/325 (47%), Gaps = 5/325 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI      G+   A+ +    +       V  F+ALISA  + G   EA  + + M  
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P+ VTYN++I    K    F     +FD M      PD +TFN+++ V  R    +
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHN-RFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVD 449

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               L  E+  RG+  +  TYNTL+   C+   ++ A ++  EM +  + P+ +T + ++
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+ +  +L++AL +F  ++   I LD V+YN ++    K  + +EA  +   +   G+ 
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  TYN ++ G+  +    +   +F +MK +   P+  TY+TLI    K G   +++++
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629

Query: 497 FREFKQAGLKADVVLYSALIDALCK 521
             E +  G   D        + +C+
Sbjct: 630 ISEMRSNGFSGDAFTIKMAEEIICR 654


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 216/438 (49%), Gaps = 70/438 (15%)

Query: 157 DDYTFLLRELGNRGEWSKAIQCFA-----FAVKREERKNDQGKLASAMISILGRLGKVDL 211
           D+  + L+ + NRG     I C       F +K+ E+       A  ++ IL + GK D 
Sbjct: 94  DESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEK-------AIQVMEILEKHGKPD- 145

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI- 270
                           V+A++A+IS + ++     A  V + MK+   +P++VTYN +I 
Sbjct: 146 ----------------VFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIG 189

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRG 329
           + CG+G +D    + + D +L++  +P  IT+  L+ A  ++GG+ EA + L +EM+ RG
Sbjct: 190 NFCGRGRLDL--ALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMK-LLDEMLSRG 246

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFE---------------------------------- 355
           +  D +TYN +++ +CK   +D AFE                                  
Sbjct: 247 LRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGE 306

Query: 356 -IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY 414
            +M++M  K   PN +TYST+I    + G++D+A N+   MK   +  D  SY+ ++S  
Sbjct: 307 KLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISAL 366

Query: 415 AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
            + G+ + A+    +M S G   D ++YN++L    K G  DE   +FE++      PN 
Sbjct: 367 CREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNA 426

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
            +Y+TL       G    A+ +  E    G+  D + Y++LI  LC++GLV+ A+ LL +
Sbjct: 427 GSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVD 486

Query: 535 MTK-EGIRPNVVTYNSII 551
           M + E  +P V++YN+++
Sbjct: 487 MFESEKCQPTVISYNTVL 504



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 164/333 (49%), Gaps = 8/333 (2%)

Query: 240 RSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV---VEIFDDMLRNGVQ 296
           +S    E++     M     KP+++    +I    KG  + K +   +++ + + ++G +
Sbjct: 89  KSAKYDESLYFLQHMVNRGYKPDVILCTKLI----KGFFNMKKIEKAIQVMEILEKHG-K 143

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           PD   +N++++   +    + A  + + M  RG + D+ TYN L+   C   ++DLA  +
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           M ++   N  P V+TY+ +I+     G +D+A+ +  EM   G+  DR +YN V++   K
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCK 263

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
            G  + A      +  +G      TYN LL     +GK++   ++   M      PN +T
Sbjct: 264 EGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPIT 323

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           YSTLI    + G   EA  + +  K+  L  D   Y  LI ALC+ G V+ A+  LD+M 
Sbjct: 324 YSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMI 383

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
             G  P++++YNSI+ +  ++   +  ++  E+
Sbjct: 384 SGGHLPDILSYNSILASLCKNGNADEALNIFEK 416



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 162/363 (44%), Gaps = 71/363 (19%)

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
           GR G++DLA  + +  L +    TV  ++ LI A    G   EA+ + + M    L+P+ 
Sbjct: 193 GR-GRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDR 251

Query: 264 VTYNAVIDA-CGKGGVD---------------------------------FKHVVEIFDD 289
            TYN V++  C +G +D                                 +++  ++  D
Sbjct: 252 YTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSD 311

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           ML  G +P+ IT+++L+    R G  + A+N+   M  + +  D ++Y+ L+ A+C+  +
Sbjct: 312 MLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGK 371

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +DLA E + +M +    P++++Y++++    K G  D+ALN+F ++  +G   +  SYNT
Sbjct: 372 VDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNT 431

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE----VRRMFEQM 465
           +       G    AL +  EM S+GI  D +TYN+L+    + G  D+    +  MFE  
Sbjct: 432 LFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESE 491

Query: 466 KA---------------------DCVS-----------PNLLTYSTLIDVYSKGGLYKEA 493
           K                      D +            PN  TY+ LI      G   +A
Sbjct: 492 KCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDA 551

Query: 494 MQI 496
           M++
Sbjct: 552 MEL 554



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 1/211 (0%)

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           L+  CK A+ D +   +  M  +   P+V+  + +I G+    +++ A+ +   ++  G 
Sbjct: 84  LNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG- 142

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D  +YN V+S + K  R + A  V   M+  G   D VTYN L+G +  +G+ D   R
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALR 202

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + +Q+  D   P ++TY+ LI+     G   EAM++  E    GL+ D   Y+ +++ +C
Sbjct: 203 VMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMC 262

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           K G+++ A   L  ++K G    V TYN ++
Sbjct: 263 KEGMLDRAFEFLSRISKNGCVAGVSTYNILL 293



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 129/264 (48%), Gaps = 16/264 (6%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           G   Y  LLR+L N G+W    +  +  + +    N      S +I+ L R GK+D AKN
Sbjct: 285 GVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPIT--YSTLITALCRDGKIDEAKN 342

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-C 273
           + +    +      Y++  LISA  R G    AI   + M      P++++YN+++ + C
Sbjct: 343 VLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLC 402

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA-----ARNLFNEMVHR 328
             G  D    + IF+ +   G  P+  ++N+L      G LW +     A  +  EM+  
Sbjct: 403 KNGNAD--EALNIFEKLGEVGCPPNAGSYNTLF-----GALWSSGDKIRALGMILEMLSN 455

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-PAKNISPNVVTYSTMIDGYAKAGRLDD 387
           GID D  TYN+L+  +C+   +D A E++ +M  ++   P V++Y+T++ G  K  R+ D
Sbjct: 456 GIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIID 515

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVL 411
           A+ + + M   G   +  +Y  ++
Sbjct: 516 AIEVLAAMVNEGCLPNETTYTLLI 539



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 7/266 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK +  + +    L +G       +S LI+A  R G   EA +V   MK   L P+  +Y
Sbjct: 300 GKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSY 359

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           + +I A C +G VD    +E  DDM+  G  PD +++NS+LA   + G  + A N+F ++
Sbjct: 360 DPLISALCREGKVDL--AIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKL 417

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              G   +  +YNTL  A+        A  ++ EM +  I P+ +TY+++I    + G +
Sbjct: 418 GEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLV 477

Query: 386 DDALNMFSEM-KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           D A+ +  +M +        +SYNTVL    K+ R  +A+ V   M + G   +  TY  
Sbjct: 478 DQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTL 537

Query: 445 LLGGYGKQG-KYD--EVRRMFEQMKA 467
           L+ G G  G +YD  E+  +   M A
Sbjct: 538 LIQGIGFAGWRYDAMELANLLVNMDA 563



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 105/262 (40%), Gaps = 47/262 (17%)

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K   Y E++   +     G K DV+L + LI        +E A+ +++ + K G +P+V 
Sbjct: 89  KSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVF 147

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
            YN++I  F       C  D V+        S  LD M            R     +  +
Sbjct: 148 AYNAVISGF-------CKADRVDH------ASKVLDRM----------KKRGFEPDVVTY 184

Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
             L+    G+G+ +   R        V  ++ K   KP V+T++ ++ A       ++A 
Sbjct: 185 NILIGNFCGRGRLDLALR--------VMDQLLKDNCKPTVITYTILIEATITQGGIDEAM 236

Query: 666 MLLEE-----LRLFDNQVYG-VAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
            LL+E     LR  D   Y  V +G+    ++ +  +A      +         + YN L
Sbjct: 237 KLLDEMLSRGLRP-DRYTYNVVVNGMC---KEGMLDRAFEFLSRISKNGCVAGVSTYNIL 292

Query: 720 T-DML----WHFGQKRGAQLVV 736
             D+L    W +G+K  + ++V
Sbjct: 293 LRDLLNEGKWEYGEKLMSDMLV 314


>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Vitis vinifera]
          Length = 701

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 154/570 (27%), Positives = 269/570 (47%), Gaps = 60/570 (10%)

Query: 290 MLRNGVQPDR--ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
             R  ++P R  I +N  L V  +    + A  LF+EM+ RG+  D  T++T++      
Sbjct: 165 FFRKRLKPSREVILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVS 224

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
           +  + A E   +MP     P+ VTYS MID Y +AG +D AL ++   +     +D V++
Sbjct: 225 SLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTF 284

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           +T++ IY   G F+  L V +EM++ G++ + V YN LL   G+  +  + + ++++M  
Sbjct: 285 STLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTN 344

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN-GLVE 526
           + + P+  TY+ L+  Y +    ++A+ +++E K+ GL+  VVLY+ L+ A+C + G  E
Sbjct: 345 NGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLL-AMCADVGYTE 403

Query: 527 SAVSLLDEMTKEG-IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES-ANLDAMC 584
            A ++ ++M   G   P+  T++S+I  +  S              GK  E+ A L+AM 
Sbjct: 404 EAAAIFEDMKSSGNCMPDSWTFSSLITIYSCS--------------GKVSEAEAMLNAML 449

Query: 585 SQDDKDVQEAGRTDN-----QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
                   EAG   N      +I+ +G           K NR  +    ++  F ++ +L
Sbjct: 450 --------EAGFEPNIFVLTSLIQCYG-----------KANRTDE----VVRTFDRLLEL 486

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL--MGYRDNIWVQA 697
            I P+      +LN  ++ +  E+   L++ +   + ++  V   LL           +A
Sbjct: 487 DITPDDRFCGCMLNVMTQ-SPKEELGKLIDCIDKANPKLGNVVKLLLEEQNGEGTFRKEA 545

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES----C 753
             LFD +    +    A+ N L D+  +      A  +   G   +++ ++ S+S     
Sbjct: 546 SELFDSIS---ADVKKAYCNCLIDLCVNLNLLEKACELFDLGLTLEIYIDIQSKSPTQWS 602

Query: 754 LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEV 813
           L L  +S GAA   +H W+ ++   V  G ELP +L I TG GKH     D  L    E 
Sbjct: 603 LHLKSLSLGAALTALHIWMNDLSKAVEVGEELPAVLGINTGHGKHK--YSDKGLASVFES 660

Query: 814 LLTGMGAPFWVANCNLGRFISTGPMVASWL 843
            L  + APF  A   +G F++T     SWL
Sbjct: 661 HLKELNAPFHEAPDKVGWFLTTKVAATSWL 690



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 174/342 (50%), Gaps = 16/342 (4%)

Query: 245 QEAISVFNSMK------------RYNLKPN--LVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           Q+A+ V N+M             R  LKP+  ++ YN  +    K   +     ++FD+M
Sbjct: 144 QDAVIVLNNMTNPETALLAFGFFRKRLKPSREVILYNVTLKVFRKCR-NLDRAEKLFDEM 202

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           L  GV+PD ITF+++++      L   A   F +M   G   D  TY+ ++DA  +   +
Sbjct: 203 LERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNV 262

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           D+A ++      +    + VT+ST+I  Y  +G  D  LN++ EMK LG+  + V YNT+
Sbjct: 263 DMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTL 322

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           L    +  R  +A  + KEM ++G++    TY ALL  YG+    ++   ++++MK   +
Sbjct: 323 LDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGL 382

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG-LKADVVLYSALIDALCKNGLVESAV 529
             +++ Y+TL+ + +  G  +EA  IF + K +G    D   +S+LI     +G V  A 
Sbjct: 383 ELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAE 442

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           ++L+ M + G  PN+    S+I  +G++  T+  V   +R L
Sbjct: 443 AMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLL 484



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 225/501 (44%), Gaps = 32/501 (6%)

Query: 17  QNHQYPHNHL---KNNHHRQSHHPSSRPHWTSHKVSLTKPPLSPSPRNAPKPAATSTTVA 73
            +H Y HN L   + +  R  +  S +P+  S   S T   ++      P P  T    A
Sbjct: 14  HDHHYLHNSLSFSRKSRLRSFNSFSFKPNSLSLH-SRTFLQITHVSLEDPIPQETQKADA 72

Query: 74  PNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGR----PKIAMSTRHSVVAEEAL 129
            NP   +S  P   +KS +  +    R+++     +  R     KIA S       EE +
Sbjct: 73  SNPP--NSQDPDRKTKSYIWVNPRSPRASKLRQHSYDARYASLVKIAESLDSCEATEEDV 130

Query: 130 HHVTAFARDDVSLGD-ILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREER 188
             V         LGD IL++         D   +L  + N      A+  F F  KR  +
Sbjct: 131 SQVLR------CLGDKILEQ---------DAVIVLNNMTNP---ETALLAFGFFRKRL-K 171

Query: 189 KNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAI 248
            + +  L +  + +  +   +D A+ +F+  L  G       FS +IS    S    +A+
Sbjct: 172 PSREVILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAV 231

Query: 249 SVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
             F  M  +   P+ VTY+A+IDA G+ G +    ++++D       + D +TF++L+ +
Sbjct: 232 EWFEKMPEFGCHPDDVTYSAMIDAYGRAG-NVDMALKLYDRARTEKWRIDPVTFSTLIRI 290

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
               G ++   N++ EM   G+  ++  YNTLLDA+ +  +   A  I  EM    + P+
Sbjct: 291 YGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPS 350

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
             TY+ ++  Y +A   +DAL ++ EMK  G+ L  V YNT+L++ A +G  EEA  + +
Sbjct: 351 WGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFE 410

Query: 429 EMESSG-IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           +M+SSG    D+ T+++L+  Y   GK  E   M   M      PN+   ++LI  Y K 
Sbjct: 411 DMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKA 470

Query: 488 GLYKEAMQIFREFKQAGLKAD 508
               E ++ F    +  +  D
Sbjct: 471 NRTDEVVRTFDRLLELDITPD 491



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 164/375 (43%), Gaps = 80/375 (21%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SAMI   GR G VD+A  +++ A  E +      FS LI  YG SG     ++V+  MK 
Sbjct: 250 SAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKA 309

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +KPNLV YN ++DA G+    ++    I+ +M  NG+QP   T+ +LL    R    E
Sbjct: 310 LGVKPNLVIYNTLLDAMGRAKRPWQ-AKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAE 368

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  ++ EM  +G++  +  YNTLL A+C                               
Sbjct: 369 DALIVYKEMKEKGLELSVVLYNTLL-AMC------------------------------- 396

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGL-DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
              A  G  ++A  +F +MK  G  + D  +++++++IY+  G+  EA  +   M  +G 
Sbjct: 397 ---ADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGF 453

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP---------NLLTYS------TL 480
             +     +L+  YGK  + DEV R F+++    ++P         N++T S       L
Sbjct: 454 EPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDITPDDRFCGCMLNVMTQSPKEELGKL 513

Query: 481 IDVYSK-------------------GGLYKEAMQIFREFKQAGLKADV--VLYSALIDAL 519
           ID   K                   G   KEA ++F       + ADV     + LID L
Sbjct: 514 IDCIDKANPKLGNVVKLLLEEQNGEGTFRKEASELFD-----SISADVKKAYCNCLID-L 567

Query: 520 CKN-GLVESAVSLLD 533
           C N  L+E A  L D
Sbjct: 568 CVNLNLLEKACELFD 582


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 236/489 (48%), Gaps = 46/489 (9%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V A++ +I  + + G   +A  +F  M +  + P+ VTY++V+ A C    +D       
Sbjct: 219 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEA--F 276

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M+  GV P+  T+N+L+   S  G W+ A  +F EM  + I  D+ T+N L+ ++CK
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCK 336

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A ++   M  K  +P+V +Y+ M++GYA  G L D  ++F  M   GI     +
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICT 396

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +N ++  YA  G  ++A+++  EM   G++ + +TY  ++    + GK D+    F QM 
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMI 456

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V+P+   Y  LI  +   G   +A ++  E    G+  D+VL+S++I+ LCK G V 
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVM 516

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A ++ D     G+ P  V Y+ ++D +       C V  +E+ L         DAM S 
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGY-------CLVGKMEKAL------RVFDAMVS- 562

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
                  AG   N +  V+G LV      G+ +          L +F++M +  IKP+ +
Sbjct: 563 -------AGIEPNDV--VYGTLVNGYCKIGRIDEG--------LSLFREMLQKGIKPSTI 605

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG------LLMG-YRDNIWVQALS 699
            ++ I++       FE    +  +++  +    G+A        +L G +++  + +A+ 
Sbjct: 606 LYNIIIDGL-----FEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 660

Query: 700 LFDEVKLMD 708
           LF E++ M+
Sbjct: 661 LFKELRAMN 669



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 193/364 (53%), Gaps = 1/364 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S+++  L +   +D A+      +N+G     + ++ LI  Y  +G  +EA+ VF  M+R
Sbjct: 258 SSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 317

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            ++ P++VT+N ++ +  K G   K   ++FD M   G  PD  ++N +L   +  G   
Sbjct: 318 QSILPDVVTFNMLMGSLCKYG-KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 376

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
              +LF+ M+  GI   I T+N L+ A      +D A  I  EM    + PNV+TY+T+I
Sbjct: 377 DMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVI 436

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
               + G++DDA+  F++M   G+  D+ +Y+ ++  +   G   +A  +  E+ ++G+ 
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D V +++++    K G+  + + +F+      + P  + YS L+D Y   G  ++A+++
Sbjct: 497 LDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F     AG++ + V+Y  L++  CK G ++  +SL  EM ++GI+P+ + YN IID    
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 616

Query: 557 SATT 560
           +  T
Sbjct: 617 AGRT 620



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 222/505 (43%), Gaps = 83/505 (16%)

Query: 118 STRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQ 177
           S  H++    A+    AF R  V+ G +   +         Y  L+    + G+W +A++
Sbjct: 259 SVVHALCKARAMDKAEAFLRQMVNKGVLPNNWT--------YNNLIYGYSSTGQWKEAVR 310

Query: 178 CFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETA------------------ 219
            F   ++R+    D       M S L + GK+  A+++F+T                   
Sbjct: 311 VFK-EMRRQSILPDVVTFNMLMGS-LCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 368

Query: 220 -----------------LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
                            L +G    +  F+ LI AY   G   +A+ +FN M+ + +KPN
Sbjct: 369 YATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPN 428

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA--- 317
           ++TY  VI A C  G +D    +E F+ M+  GV PD+  ++ L+   C+ G L +A   
Sbjct: 429 VLTYTTVIAALCRIGKMD--DAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486

Query: 318 -------------------------------ARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
                                          A+N+F+  V+ G+      Y+ L+D  C 
Sbjct: 487 ISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCL 546

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +M+ A  +   M +  I PN V Y T+++GY K GR+D+ L++F EM   GI    + 
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN ++    + GR   A +   EM  SGI  +  TY+ +L G  K   +DE   +F++++
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 666

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           A  V  +++T +T+I    +    +EA  +F    ++GL   VV YS +I  L K GLVE
Sbjct: 667 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVE 726

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSII 551
            A  +   M   G  P+    N ++
Sbjct: 727 EAEDMFSSMQNAGCEPDSRLLNHVV 751



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 139/548 (25%), Positives = 249/548 (45%), Gaps = 63/548 (11%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRYNLKPNL 263
           R  + +LA   F   L  G    +   + L+  +  +    EA+ +  +        P++
Sbjct: 123 RAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDV 182

Query: 264 VTYNAVIDAC---GKGGVDFKHVVEIFDDMLRNGVQ------PDRITFNSLLAVCSRGGL 314
            +Y+ ++ +    GK G          DD+LR   +      PD + +N+++    + G 
Sbjct: 183 FSYSILLKSLCDQGKSGQA--------DDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGD 234

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A +LF EMV RGI  D  TY++++ A+CK   MD A   + +M  K + PN  TY+ 
Sbjct: 235 VNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNN 294

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I GY+  G+  +A+ +F EM+   I  D V++N ++    K G+ +EA  V   M   G
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKG 354

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D  +YN +L GY  +G   ++  +F+ M  D ++P + T++ LI  Y+  G+  +AM
Sbjct: 355 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAM 414

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            IF E +  G+K +V+ Y+ +I ALC+ G ++ A+   ++M  +G+ P+   Y+ +I  F
Sbjct: 415 IIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGF 474

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
                  CT       L K KE  +          ++   G   +  I +F  ++     
Sbjct: 475 -------CT----HGSLLKAKELIS----------EIMNNGMHLD--IVLFSSIINNLCK 511

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
            G+        ++    +F     + + P  V +S +++        E A      LR+F
Sbjct: 512 LGR--------VMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKA------LRVF 557

Query: 675 DNQVYG------VAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHF 726
           D  V        V +G L+ GY +     + LSLF E+       ++  YN + D L+  
Sbjct: 558 DAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 617

Query: 727 GQKRGAQL 734
           G+   A++
Sbjct: 618 GRTVPAKV 625



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 189/401 (47%), Gaps = 3/401 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +  L++   N G   KA+    F   R+          + +I+ L R+GK+D A   F  
Sbjct: 397 FNVLIKAYANCGMLDKAM--IIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQ 454

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +++G     YA+  LI  +   G   +A  + + +    +  ++V ++++I+   K G 
Sbjct: 455 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLG- 513

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                  IFD  +  G+ P  + ++ L+      G  E A  +F+ MV  GI+ +   Y 
Sbjct: 514 RVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYG 573

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL++  CK  ++D    +  EM  K I P+ + Y+ +IDG  +AGR   A   F EM   
Sbjct: 574 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 633

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI +++ +Y+ VL    K   F+EA+ + KE+ +  ++ D +T N ++ G  +  + +E 
Sbjct: 634 GIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 693

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
           + +F  +    + P ++TYS +I    K GL +EA  +F   + AG + D  L + ++  
Sbjct: 694 KDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRE 753

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
           L K   +  A + L ++ +       +T   ++D F    T
Sbjct: 754 LLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGT 794



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 48/242 (19%), Positives = 106/242 (43%), Gaps = 31/242 (12%)

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV---E 568
           Y+ L+D   +    E A++   ++ + G+R +++  N ++  F  +  T+  +D +    
Sbjct: 114 YAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRT 173

Query: 569 RDLGKQKE----SANLDAMCSQ------DD--KDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
            +LG   +    S  L ++C Q      DD  + + E G   +  +  +  ++     +G
Sbjct: 174 PELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEG 233

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL----R 672
                C         +F++M +  I P+ VT+S++++A  +  + + A   L ++     
Sbjct: 234 DVNKAC--------DLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 285

Query: 673 LFDNQVYGVAHGLLMGYRDN-IWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRG 731
           L +N  Y   + L+ GY     W +A+ +F E++          +N L   L  +G+ + 
Sbjct: 286 LPNNWTY---NNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKE 342

Query: 732 AQ 733
           A+
Sbjct: 343 AR 344


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 186/356 (52%), Gaps = 7/356 (1%)

Query: 211 LAKNIFETA---LNEGYGNT---VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           +  N FE A    NE  GN    VY+F  +I      GY  +   V   M+   L PN+V
Sbjct: 141 IKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVV 200

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
            Y  +ID C K G D +   ++F  M    V  ++ T+  L+    + GL +    L+ +
Sbjct: 201 VYTTLIDGCCKNG-DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEK 259

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   GI  +++TYN+++   C   +++ AFE+  EM  + ++ NVVTY+T+I G  +  R
Sbjct: 260 MKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERR 319

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           + +A  +   MK  G+  + +SYNT++  Y  +G  ++A  +  +M+SSG      TYN 
Sbjct: 320 VLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNI 379

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G+ +      V  M  +M+A  +SP+ +TY+ L+D   +    ++A QI+   ++AG
Sbjct: 380 LIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAG 439

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           L AD+ +Y  LI  LC  G ++ A  L   + +  ++PN V YN++I  + +  ++
Sbjct: 440 LVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSS 495



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 168/326 (51%), Gaps = 3/326 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y ++ LI+ + + G  ++ I ++  MK   + PN+ TYN++I  C   G    +  E+FD
Sbjct: 235 YTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDG-KLNNAFELFD 293

Query: 289 DMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           +M   GV  + +T+N+L+  +C    + EA R L   M   G+  ++ +YNTL+D  C  
Sbjct: 294 EMRERGVACNVVTYNTLIGGLCQERRVLEAER-LMCRMKRDGLSPNLISYNTLIDGYCSI 352

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             +D A  +  +M +   SP++ TY+ +I G+++A       +M  EM+  G+   +V+Y
Sbjct: 353 GNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTY 412

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
             ++    +    E+A  +   ME +G+  D   Y  L+ G    G   E  ++F+ +  
Sbjct: 413 TILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDE 472

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + PN + Y+T+I  Y K G    A+++ +E  + G+  +V  Y++ I  LCK+     
Sbjct: 473 MHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTE 532

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDA 553
           A  LL +M + G++P++  +N I  A
Sbjct: 533 AEVLLKDMIELGLKPSISIWNMISKA 558



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 204/406 (50%), Gaps = 39/406 (9%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F+ M+  G+ P   TFN+LL +  +   +E A  +FNE     +  D++++  ++   C+
Sbjct: 118 FNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCE 176

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +D  FE++ +M    +SPNVV Y+T+IDG  K G ++    +F +M  L +  ++ +
Sbjct: 177 VGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYT 236

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y  +++ + K+G  ++ + + ++M+ +GI  +  TYN+++      GK +    +F++M+
Sbjct: 237 YTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMR 296

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V+ N++TY+TLI    +     EA ++    K+ GL  +++ Y+ LID  C  G ++
Sbjct: 297 ERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLD 356

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE----RDLGKQKESAN--L 580
            A SL ++M   G  P++ TYN +I  F  +  +    D V     R L   K +    +
Sbjct: 357 KASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILM 416

Query: 581 DAMCSQDDKD--------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG- 631
           DA+   D+ +        +++AG   +  I ++G L+                 LC++G 
Sbjct: 417 DALVRSDNIEKAFQIYSSMEKAGLVAD--IYIYGVLIHG---------------LCVVGD 459

Query: 632 ------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                 +F+ + ++ +KPN V ++ ++    +  S   A  LL+E+
Sbjct: 460 MKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEM 505



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 36/213 (16%)

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F QM    + P   T++ L+ +  K   +++A ++F E K   +K DV  +  +I   C+
Sbjct: 118 FNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETK-GNVKLDVYSFGIMIKGCCE 176

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ--KESAN 579
            G ++    +L +M + G+ PNVV Y ++ID         C   D+ER  GKQ   +   
Sbjct: 177 VGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGC-------CKNGDIER--GKQLFYKMGE 227

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
           LD + +Q          T   +I  F ++  +K G               + +++KM   
Sbjct: 228 LDVVANQ---------YTYTVLINGFFKMGLKKDG---------------IELYEKMKLT 263

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            I PNV T+++++  C       +A  L +E+R
Sbjct: 264 GIVPNVYTYNSMICRCCNDGKLNNAFELFDEMR 296


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 187/366 (51%), Gaps = 1/366 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           AS ++    + G+V  A+ + +     G       +++L+ AY R         +   M+
Sbjct: 146 ASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVME 205

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              ++P + TY  ++D       D   V  +F++M    +  D   ++S++    R G  
Sbjct: 206 NEGIEPTVGTYTILVDGL-SAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNV 264

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  +F+E V  GI+ +  TY  L++  CK  QM+ A  ++ +M  + +  N + ++TM
Sbjct: 265 RRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTM 324

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDGY +   +D AL +   M+ +GI LD  +YNT+     +  R +EA  + + M   G+
Sbjct: 325 IDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGV 384

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R + V+Y  L+  +  +G   E RR+F +M  +   P+L+TY+ ++D Y K G  +EA +
Sbjct: 385 RPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAER 444

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
             +E ++ GL  D+  Y+AL+   C NG V+ A+ L +EM + G +PN+V Y ++I    
Sbjct: 445 FKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLA 504

Query: 556 RSATTE 561
           +   +E
Sbjct: 505 KEGRSE 510



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 182/345 (52%), Gaps = 1/345 (0%)

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
           D    + +   NEG   TV  ++ L+     +    +  +VF  MK  NL  ++  Y++V
Sbjct: 195 DRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSV 254

Query: 270 IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
           I+A  + G + +   E+FD+ + NG++P+  T+ +L+    + G  EAA  L  +M  RG
Sbjct: 255 INAYCRAG-NVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 313

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  +   +NT++D  C+   +D A EI   M    I  +V TY+T+  G  +A R+D+A 
Sbjct: 314 VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAK 373

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
           N+   M   G+  + VSY T++SI+   G   EA  + +EM  +G     VTYN ++ GY
Sbjct: 374 NLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGY 433

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            K+G   E  R  ++M+   + P++ +Y+ L+  +   G    A+++F E KQ G K ++
Sbjct: 434 IKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNL 493

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           V Y+ALI  L K G  E A  L D M  +G+ P+   Y++++ + 
Sbjct: 494 VAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 538



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 167/377 (44%), Gaps = 36/377 (9%)

Query: 382 AGRLDDALNMFSEMKF-LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           AG LD A ++  +        +  +S + V+  Y K GR   A  +  EM   G++ +A+
Sbjct: 120 AGHLDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNAL 179

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
            YN+LL  Y ++   D V  M + M+ + + P + TY+ L+D  S      +   +F E 
Sbjct: 180 CYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM 239

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           K   L  DV  YS++I+A C+ G V  A  + DE    GI PN  TY ++I+ F      
Sbjct: 240 KSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGF------ 293

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
            C +         Q E+A +         D+Q  G   NQI  VF  ++         + 
Sbjct: 294 -CKIG--------QMEAAEMLV------TDMQVRGVGINQI--VFNTMI---------DG 327

Query: 621 RCRQEIL-CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVY 679
            CR+ ++   L +   M K+ I+ +V T++ +     R N  ++A  LL  +     +  
Sbjct: 328 YCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPN 387

Query: 680 GVAHGLLMGYRDN--IWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVL 737
            V++  L+    N    V+A  LF E+    +  +   YN + D     G  R A+    
Sbjct: 388 HVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKK 447

Query: 738 EGKRRQVWENVWSESCL 754
           E +++ +  +++S + L
Sbjct: 448 EMEKKGLVPDIYSYAAL 464



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GKVD+A  +FE     G    + A++ALIS   + G  +EA  ++++M    L P+   Y
Sbjct: 472 GKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALY 531

Query: 267 NAVI 270
           +A++
Sbjct: 532 SALV 535


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 182/349 (52%), Gaps = 5/349 (1%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V    +  +  + + +     ++  L++   ++G  + AI +   ++  + +PN+V Y
Sbjct: 94  GEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMY 153

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           +A+ID   K  +      +++ +M    + P+ IT+N+L+      G    A +L +EM+
Sbjct: 154 SAIIDGLCKDKL-VNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMI 212

Query: 327 HRGIDQDIFTYNTLLDAICK-GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
            + I+ D++T++ L+DA+CK G      F  M +M    ++PNV +Y+ MI+G  K  R+
Sbjct: 213 LKNINPDVYTFSILIDALCKEGKNAKQIFHAMVQM---GVNPNVYSYNIMINGLCKCKRV 269

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D+A+N+  EM    +  D V+YN+++    K GR   AL +  EM   G   D VTY +L
Sbjct: 270 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSL 329

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           L    K    D+   +F +MK   + P + TY+ LID   KGG  K A ++F+     G 
Sbjct: 330 LDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGC 389

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             DV  Y+ +I  LCK G+ + A+++  +M   G  PN VT+  II + 
Sbjct: 390 CIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSL 438



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 194/383 (50%), Gaps = 7/383 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +T L++ L  +GE  K +  F   V  +  + +Q    + +++ L + G+   A  +   
Sbjct: 83  WTTLMKGLCLKGEVKKLLH-FHDKVVAQAFQTNQVSYGT-LLNGLCKTGETRCAIKLLRM 140

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             +      V  +SA+I    +     EA  +++ M    + PN++TYN +I A    G 
Sbjct: 141 IEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAG- 199

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
                  +  +M+   + PD  TF+ L+ A+C  G   + A+ +F+ MV  G++ ++++Y
Sbjct: 200 QLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG---KNAKQIFHAMVQMGVNPNVYSY 256

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N +++ +CK  ++D A  ++ EM  KN+ P+ VTY+++IDG  K+GR+  ALN+ +EM  
Sbjct: 257 NIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHH 316

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   D V+Y ++L    K    ++A  +  +M+  GI+    TY AL+ G  K G+   
Sbjct: 317 RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKN 376

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            + +F+ +       ++ TY+ +I    K G++ EA+ I  + +  G   + V +  +I 
Sbjct: 377 AQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIR 436

Query: 518 ALCKNGLVESAVSLLDEMTKEGI 540
           +L +    + A  LL EM  +G+
Sbjct: 437 SLFEKDENDKAEKLLHEMIAKGL 459



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 231/483 (47%), Gaps = 47/483 (9%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           +  F+ ++ +  +  Y    IS+   M    ++ NLVT + +I+  C  G + F     +
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFS--FSL 67

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
              +L+ G  P+ IT+ +L+  +C +G + +   +  +++V +    +  +Y TLL+ +C
Sbjct: 68  LGKILKLGYXPNTITWTTLMKGLCLKGEV-KKLLHFHDKVVAQAFQTNQVSYGTLLNGLC 126

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  +   A +++  +  ++  PNVV YS +IDG  K   +++A +++SEM    I  + +
Sbjct: 127 KTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVI 186

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +YNT++  +   G+   A  +  EM    I  D  T++ L+    K+GK    +++F  M
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAM 244

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
               V+PN+ +Y+ +I+   K     EAM + RE     +  D V Y++LID LCK+G +
Sbjct: 245 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 304

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE--------- 576
            SA++L++EM   G   +VVTY S++DA  ++      +D       K KE         
Sbjct: 305 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQ----NLDKATALFMKMKERGIQPTMYT 360

Query: 577 -SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
            +A +D +C        + GR  N   ++F  L+ +               LC  G+F +
Sbjct: 361 YTALIDGLC--------KGGRLKNA-QELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDE 411

Query: 636 MHKLKIK-------PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
              +K K       PN VTF  I+ +    +  + A  LL E+         +A GLL G
Sbjct: 412 ALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM---------IAKGLL-G 461

Query: 689 YRD 691
           +R+
Sbjct: 462 FRN 464



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/404 (21%), Positives = 175/404 (43%), Gaps = 54/404 (13%)

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            ++ SP ++ ++ ++    K       +++  +M   GI  + V+ + +++ +  LG+  
Sbjct: 4   VRHTSP-IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMA 62

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
            +  +  ++   G   + +T+  L+ G   +G+  ++    +++ A     N ++Y TL+
Sbjct: 63  FSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLL 122

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           +   K G  + A+++ R  +    + +VV+YSA+ID LCK+ LV  A  L  EM    I 
Sbjct: 123 NGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIF 182

Query: 542 PNVVTYNSIIDAF--------GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
           PNV+TYN++I AF          S   E  + ++  D+     S  +DA+C         
Sbjct: 183 PNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDV--YTFSILIDALC--------- 231

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
                             K G+  K+            +F  M ++ + PNV +++ ++N
Sbjct: 232 ------------------KEGKNAKQ------------IFHAMVQMGVNPNVYSYNIMIN 261

Query: 654 ACSRCNSFEDASMLLEELRLFDNQVYGVA--HGLLMGY-RDNIWVQALSLFDEVKLMDSS 710
              +C   ++A  LL E+ L  N V      + L+ G  +      AL+L +E+      
Sbjct: 262 GLCKCKRVDEAMNLLREM-LHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQP 320

Query: 711 TASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
                Y +L D L        A  + ++ K R +   +++ + L
Sbjct: 321 ADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 364


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 226/473 (47%), Gaps = 14/473 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V  A ++F+  +++G   T   +  LI      G   E   +   M    L P+   +
Sbjct: 305 GEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEF 364

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEM 325
           N VI    +    +K  + +   ++  GV PD  T+  L+  +C    L EA  NL+++M
Sbjct: 365 NLVIKGLLRDK-RWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAV-NLWDKM 421

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              G+   I TY++LL   C+  +MD A ++ +EMP K   PN VTY+T++ GY K    
Sbjct: 422 KEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAF 481

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D+A  + +EM+  G+     +YN +++    + R  E   + K   S G     +TYN++
Sbjct: 482 DNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSI 541

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G+ K G       M+ QM+   ++PN++TY++ ID Y +      A+++    ++ G+
Sbjct: 542 INGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGI 601

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           + D+  Y+A ID  CK G +  A+  L  + K+G+ P+V  YNS +  + ++        
Sbjct: 602 QPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGY-KNLKMMAEAS 660

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
                + KQ+  A+ +   +  D    + G      ++++ +++A       K       
Sbjct: 661 KFYYSMIKQRVVADTEIYTTLIDG-FSKVGNVAFA-LELYSEMMANHVIPDDKTFTALTH 718

Query: 626 ILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            LC  G       +   M +L + PN+VT++ ++NAC R    ++A  L +E+
Sbjct: 719 GLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEM 771



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 163/346 (47%), Gaps = 9/346 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++D A  ++    ++G+      ++ L+  Y +      A ++ N M++  +     TY
Sbjct: 444 GRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTY 503

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLR----NGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           N +I+    G      V E+ D+ML+     G  P  +T+NS++    + G+  +A  ++
Sbjct: 504 NILIN----GLYMVNRVCEV-DEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMY 558

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            +M  +GI  +I TY + +D  C+    DLA +++  +    I P++  Y+  ID + K 
Sbjct: 559 RQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQ 618

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G +  AL+    +   G+  D   YN+ ++ Y  L    EA      M    +  D   Y
Sbjct: 619 GNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIY 678

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             L+ G+ K G       ++ +M A+ V P+  T++ L     + G    A ++  + ++
Sbjct: 679 TTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRR 738

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
             +  ++V Y+ LI+A  ++G ++ A  L DEM   G+ P+  TY+
Sbjct: 739 LDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYD 784



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 140/284 (49%), Gaps = 5/284 (1%)

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           V  A G    D    + +FD+M   G   D   ++ ++  C RGG+   A  LF+EM   
Sbjct: 158 VTTALGASAAD---ALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGA 214

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G+  D   Y   +  +CK    D A +++ +M      P  +TYS+++D   K  R+D+A
Sbjct: 215 GVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEA 274

Query: 389 LNMFSEMKF-LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           L +  +M    G  +D V    ++  Y   G   +AL +  E+ S G+    VTY  L+ 
Sbjct: 275 LRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIK 334

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           G   +G  DE  ++  QM    + P+   ++ +I    +   +K+A+ + +     G+  
Sbjct: 335 GCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-P 393

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           DV  Y  LI  LCK+  +  AV+L D+M + G++P++VTY+S++
Sbjct: 394 DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 145/316 (45%), Gaps = 16/316 (5%)

Query: 211 LAKNIFETA---LNEGYGNTV----YAFSALISA-YGRSGYCQEAISVFNSMKRY---NL 259
           + K  F+ A   LNE   N V    Y ++ LI+  Y  +  C+    V   +KR+     
Sbjct: 476 IKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCE----VDEMLKRFLSEGF 531

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            P  +TYN++I+   K G+       ++  M + G+ P+ +T+ S +    R    + A 
Sbjct: 532 VPTTMTYNSIINGFVKAGM-MGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAV 590

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            L   +   GI  DI  YN  +D  CK   M  A   +  +    ++P+V  Y++ + GY
Sbjct: 591 KLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGY 650

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
                + +A   +  M    +  D   Y T++  ++K+G    AL +  EM ++ +  D 
Sbjct: 651 KNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDD 710

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
            T+ AL  G  + G  D  +R+ + M+   VSPN++TY+ LI+   + G  +EA Q+  E
Sbjct: 711 KTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDE 770

Query: 500 FKQAGLKADVVLYSAL 515
              +G+  D   Y  L
Sbjct: 771 MLSSGVVPDDTTYDIL 786



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 140/305 (45%), Gaps = 41/305 (13%)

Query: 180 AFAVKREERKNDQG---KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALIS 236
           A+A+  E R+N         + +I+ L  + +V     + +  L+EG+  T   ++++I+
Sbjct: 484 AYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIIN 543

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGV 295
            + ++G    A  ++  M++  + PN+VTY + ID  C     D    V++   + R+G+
Sbjct: 544 GFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDL--AVKLLIYVRRDGI 601

Query: 296 QPDRITFNSLL-AVCSRGGLWEA----------------------------------ARN 320
           QPD   +N+ +   C +G +  A                                  A  
Sbjct: 602 QPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASK 661

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
            +  M+ + +  D   Y TL+D   K   +  A E+ +EM A ++ P+  T++ +  G  
Sbjct: 662 FYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLC 721

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           ++G +D A  +  +M+ L +  + V+YN +++   + G+ +EA  +  EM SSG+  D  
Sbjct: 722 RSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDT 781

Query: 441 TYNAL 445
           TY+ L
Sbjct: 782 TYDIL 786



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 165/381 (43%), Gaps = 22/381 (5%)

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
           + M  + + P+  + + ++   A      DAL +F EM+  G   D   Y+ V+    + 
Sbjct: 139 SRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRG 198

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G   +A+ +  EM  +G++ D   Y   + G  K    D   ++  +M+     P  LTY
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQA-GLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           S+++DV  K     EA+++  +   A G K DVVL + L+   C NG V  A+ L DE+ 
Sbjct: 259 SSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVV 318

Query: 537 KEGIRPNVVTYNSII---DAFGRS-ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQ 592
            +G+ P  VTY  +I   DA G +  T +     +E+ L       NL       DK  +
Sbjct: 319 SDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWK 378

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC-------ILGVFQKMHKLKIKPNV 645
           +A       I +  +LV +          C    LC        + ++ KM +  +KP++
Sbjct: 379 DA-------IGLL-KLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSI 430

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDE 703
           VT+ ++L         ++A  L  E+         V +  LM GY +   +  A +L +E
Sbjct: 431 VTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNE 490

Query: 704 VKLMDSSTASAFYNALTDMLW 724
           ++    S     YN L + L+
Sbjct: 491 MRQNGVSCGDYTYNILINGLY 511


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 186/356 (52%), Gaps = 7/356 (1%)

Query: 211 LAKNIFETA---LNEGYGNT---VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           +  N FE A    NE  GN    VY+F  +I      GY  +   V   M+   L PN+V
Sbjct: 128 IKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVV 187

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
            Y  +ID C K G D +   ++F  M    V  ++ T+  L+    + GL +    L+ +
Sbjct: 188 VYTTLIDGCCKNG-DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEK 246

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   GI  +++TYN+++   C   +++ AFE+  EM  + ++ NVVTY+T+I G  +  R
Sbjct: 247 MKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERR 306

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           + +A  +   MK  G+  + +SYNT++  Y  +G  ++A  +  +M+SSG      TYN 
Sbjct: 307 VLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNI 366

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G+ +      V  M  +M+A  +SP+ +TY+ L+D   +    ++A QI+   ++AG
Sbjct: 367 LIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAG 426

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           L AD+ +Y  LI  LC  G ++ A  L   + +  ++PN V YN++I  + +  ++
Sbjct: 427 LVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSS 482



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 168/326 (51%), Gaps = 3/326 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y ++ LI+ + + G  ++ I ++  MK   + PN+ TYN++I  C   G    +  E+FD
Sbjct: 222 YTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDG-KLNNAFELFD 280

Query: 289 DMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           +M   GV  + +T+N+L+  +C    + EA R L   M   G+  ++ +YNTL+D  C  
Sbjct: 281 EMRERGVACNVVTYNTLIGGLCQERRVLEAER-LMCRMKRDGLSPNLISYNTLIDGYCSI 339

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             +D A  +  +M +   SP++ TY+ +I G+++A       +M  EM+  G+   +V+Y
Sbjct: 340 GNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTY 399

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
             ++    +    E+A  +   ME +G+  D   Y  L+ G    G   E  ++F+ +  
Sbjct: 400 TILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDE 459

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + PN + Y+T+I  Y K G    A+++ +E  + G+  +V  Y++ I  LCK+     
Sbjct: 460 MHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTE 519

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDA 553
           A  LL +M + G++P++  +N I  A
Sbjct: 520 AEVLLKDMIELGLKPSISIWNMISKA 545



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 203/405 (50%), Gaps = 39/405 (9%)

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           + M+  G+ P   TFN+LL +  +   +E A  +FNE     +  D++++  ++   C+ 
Sbjct: 106 NQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEV 164

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             +D  FE++ +M    +SPNVV Y+T+IDG  K G ++    +F +M  L +  ++ +Y
Sbjct: 165 GYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTY 224

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
             +++ + K+G  ++ + + ++M+ +GI  +  TYN+++      GK +    +F++M+ 
Sbjct: 225 TVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRE 284

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             V+ N++TY+TLI    +     EA ++    K+ GL  +++ Y+ LID  C  G ++ 
Sbjct: 285 RGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDK 344

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE----RDLGKQKESAN--LD 581
           A SL ++M   G  P++ TYN +I  F  +  +    D V     R L   K +    +D
Sbjct: 345 ASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMD 404

Query: 582 AMCSQDDKD--------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-- 631
           A+   D+ +        +++AG   +  I ++G L+                 LC++G  
Sbjct: 405 ALVRSDNIEKAFQIYSSMEKAGLVAD--IYIYGVLIHG---------------LCVVGDM 447

Query: 632 -----VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                +F+ + ++ +KPN V ++ ++    +  S   A  LL+E+
Sbjct: 448 KEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEM 492



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 36/211 (17%)

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           QM    + P   T++ L+ +  K   +++A ++F E K   +K DV  +  +I   C+ G
Sbjct: 107 QMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETK-GNVKLDVYSFGIMIKGCCEVG 165

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ--KESANLD 581
            ++    +L +M + G+ PNVV Y ++ID         C   D+ER  GKQ   +   LD
Sbjct: 166 YLDKGFEVLGQMEEMGLSPNVVVYTTLIDGC-------CKNGDIER--GKQLFYKMGELD 216

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
            + +Q          T   +I  F ++  +K G               + +++KM    I
Sbjct: 217 VVANQ---------YTYTVLINGFFKMGLKKDG---------------IELYEKMKLTGI 252

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            PNV T+++++  C       +A  L +E+R
Sbjct: 253 VPNVYTYNSMICRCCNDGKLNNAFELFDEMR 283


>gi|2335106|gb|AAC02776.1| putative salt-inducible protein [Arabidopsis thaliana]
          Length = 810

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 206/406 (50%), Gaps = 4/406 (0%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           ++  L+REL  RG     +  F + +K ++    +  + + MI +  R   VD A+ +F 
Sbjct: 109 NFPVLIRELSRRGCIELCVNVFKW-MKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFF 167

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                        + ALI+A+GR+G  + A+++ + M R  + P+  TYN +I+ACG  G
Sbjct: 168 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 227

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            +++  +E+   M  NGV PD +T N +L+    G  +  A + F  M    +  D  T+
Sbjct: 228 -NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 286

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNIS--PNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           N ++  + K  Q   A ++   M  K     P+VVT+++++  Y+  G +++   +F  M
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G+  + VSYN ++  YA  G    AL V  +++ +GI  D V+Y  LL  YG+  + 
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            + + +F  M+ +   PN++TY+ LID Y   G   EA++IFR+ +Q G+K +VV    L
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + A  ++    +  ++L      GI  N   YNS I ++  +A  E
Sbjct: 467 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 512



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 185/383 (48%), Gaps = 15/383 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCF-AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           +  ++  L   G+ S+A+  F +   KR E + D     S M  +    G+++  + +FE
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM-HLYSVKGEIENCRAVFE 344

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
             + EG    + +++AL+ AY   G    A+SV   +K+  + P++V+Y  ++++ G+  
Sbjct: 345 AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 404

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              K   E+F  M +   +P+ +T+N+L+      G    A  +F +M   GI  ++ + 
Sbjct: 405 QPGK-AKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 463

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TLL A  +  +      +++   ++ I+ N   Y++ I  Y  A  L+ A+ ++  M+ 
Sbjct: 464 CTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK 523

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             +  D V++  ++S   ++ ++ EA+   KEME   I               K+G+  E
Sbjct: 524 KKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI------------PLTKEGQVTE 571

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +F QMK     P+++ Y++++  Y+    + +A ++F E +  G++ D +  SAL+ 
Sbjct: 572 AESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMR 631

Query: 518 ALCKNGLVESAVSLLDEMTKEGI 540
           A  K G   +   L+D M ++ I
Sbjct: 632 AFNKGGQPSNVFVLMDLMREKEI 654



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 178/371 (47%), Gaps = 28/371 (7%)

Query: 231 FSALISAYGRSGYCQEAISVFNSM--KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           F+ +I    + G   +A+ +FNSM  KR   +P++VT+ +++      G + ++   +F+
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG-EIENCRAVFE 344

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M+  G++P+ +++N+L+   +  G+   A ++  ++   GI  D+ +Y  LL++  +  
Sbjct: 345 AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 404

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           Q   A E+   M  +   PNVVTY+ +ID Y   G L +A+ +F +M+  GI  + VS  
Sbjct: 405 QPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVC 464

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+L+  ++  +      V    +S GI  +   YN+ +G Y    + ++   +++ M+  
Sbjct: 465 TLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKK 524

Query: 469 CVSPNLLTYSTLID-----------------------VYSKGGLYKEAMQIFREFKQAGL 505
            V  + +T++ LI                          +K G   EA  IF + K AG 
Sbjct: 525 KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEGQVTEAESIFNQMKMAGC 584

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           + DV+ Y++++ A   +     A  L  EM   GI P+ +  ++++ AF +         
Sbjct: 585 EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVF- 643

Query: 566 DVERDLGKQKE 576
            V  DL ++KE
Sbjct: 644 -VLMDLMREKE 653



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 135/284 (47%), Gaps = 30/284 (10%)

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS-YNTVLSIYAKLGRFEEALLVCKEM 430
           +  +I   ++ G ++  +N+F  MK       R   YN ++ ++A+    ++A  +  EM
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEM 169

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           +    + DA TY+AL+  +G+ G++     + + M    ++P+  TY+ LI+     G +
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNW 229

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           +EA+++ ++    G+  D+V ++ ++ A         A+S  + M    +RP+  T+N I
Sbjct: 230 REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNII 289

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
           I    +              LG+  ++  LD   S  +K  +   R D   +  F  ++ 
Sbjct: 290 IYCLSK--------------LGQSSQA--LDLFNSMREKRAE--CRPD---VVTFTSIMH 328

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
             + +G+ EN CR        VF+ M    +KPN+V+++A++ A
Sbjct: 329 LYSVKGEIEN-CR-------AVFEAMVAEGLKPNIVSYNALMGA 364


>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
 gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
          Length = 384

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 183/348 (52%), Gaps = 2/348 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRS-GYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           A ++F   + +G   TV  ++ +I  Y R       A+ +   MK    KP+ + YN ++
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLV 60

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           +     G   +   +I DDM ++ V  + +T+ +L+   +  G  +  R LF EM  +G 
Sbjct: 61  NGLVNSG-RLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGE 119

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             + +TYN L+    +      A E+  EM     + +V TY+  I  Y K G L+D   
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER 179

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +  EM   G+  D+V+YNT+L +YAK   F +A  + +EM  +G R +  TYN +L    
Sbjct: 180 LLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSAR 239

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K+    E  ++FE +K+  V PN++TYS ++ +Y + GLY EA +++ E  +AG    ++
Sbjct: 240 KEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCII 299

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            YS LI++   +G+ + A++   +M K GI P+   Y +++DA+G++ 
Sbjct: 300 AYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAG 347



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 185/352 (52%), Gaps = 3/352 (0%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K+D A  + E     G       ++ L++    SG  + A  + + MK+  +  NLVTY 
Sbjct: 33  KLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYT 92

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            +I      G   +   ++F +M   G  P+  T+N+L+    R GL++ A  L++EM  
Sbjct: 93  NLIKEYANAG-RLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDG 151

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G  +D+ TYN  +    K   ++    ++ EM  K + P+ VTY+T++D YAK      
Sbjct: 152 VGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVK 211

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +  EM   G   +  +YN +LS   K     EA  + + ++S G+  + VTY+A+L 
Sbjct: 212 AHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLS 271

Query: 448 GYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            YG+ G Y E  +++++M +A C+ P ++ YS LI+ Y   G+Y+EA+  F++ +++G+ 
Sbjct: 272 LYGRHGLYTEAAKLWDEMIEAGCI-PCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIV 330

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            D  +Y+AL+DA  K G    A  L  EMTKEG  P+ +TY  ++ AF  + 
Sbjct: 331 PDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAG 382



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 167/341 (48%), Gaps = 1/341 (0%)

Query: 183 VKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSG 242
           V +E  K     L + +++ L   G+++ A+ I +    +     +  ++ LI  Y  +G
Sbjct: 43  VMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAG 102

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
             Q+   +F  MK     PN  TYNA+I   G+ G+ FK  +E++D+M   G   D  T+
Sbjct: 103 RLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGL-FKEALELYDEMDGVGCAKDVHTY 161

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           N  +A+  + GL E    L +EM  +G+  D  TYNTLLD   K +    A EI+ EM  
Sbjct: 162 NIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTE 221

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
               PN+ TY+ M+    K   + +A  +F  +K  G+  + V+Y+ +LS+Y + G + E
Sbjct: 222 AGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTE 281

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A  +  EM  +G     + Y+ L+  YG  G Y E    F+ M+   + P+   Y+ L+D
Sbjct: 282 AAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMD 341

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
            Y K G  +EA  ++ E  + G   D + Y  L+ A    G
Sbjct: 342 AYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAG 382



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 128/283 (45%), Gaps = 36/283 (12%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++   + +F+   ++G     + ++ALI  YGR G  +EA+ +++ M       ++ TY
Sbjct: 102 GRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTY 161

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N  I   GK G+  + +  + D+M   GV PD++T+N+LL V ++   +  A  +  EM 
Sbjct: 162 NIAIAMYGKRGL-LEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMT 220

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST------------ 374
             G   +I+TYN +L +  K   +  A ++   + +K + PN+VTYS             
Sbjct: 221 EAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYT 280

Query: 375 -----------------------MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
                                  +I+ Y   G   +AL  F +M+  GI  D   Y  ++
Sbjct: 281 EAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALM 340

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
             Y K GR  EA L+  EM   G   D +TY  L+  +   G+
Sbjct: 341 DAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGR 383



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 170/374 (45%), Gaps = 39/374 (10%)

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKL-GRFEEALLVCKEMESSGIRKDAVTYNALL 446
           A ++F  M   G     V+Y  ++  Y +   + + AL + + M+ SG + D + YN L+
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLV 60

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G    G+ +   ++ + MK D VS NL+TY+ LI  Y+  G  ++  ++F+E K  G  
Sbjct: 61  NGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGES 120

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            +   Y+ALI    + GL + A+ L DEM   G   +V TYN  I  +G+    E    D
Sbjct: 121 PNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLE----D 176

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG---------QLVAEKAGQGK 617
           +ER          LD M   D K V     T N ++ V+          +++ E    G 
Sbjct: 177 MER---------LLDEM---DTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGY 224

Query: 618 KEN-----------RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
           + N           R  Q +     +F+ +    + PN+VT+SA+L+   R   + +A+ 
Sbjct: 225 RPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAK 284

Query: 667 LLEELRLFDNQVYGVAH-GLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLW 724
           L +E+         +A+ GL+  Y    ++ +AL+ F +++       +  Y AL D   
Sbjct: 285 LWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYG 344

Query: 725 HFGQKRGAQLVVLE 738
             G+ R A+L+  E
Sbjct: 345 KAGRCREAELLYFE 358



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 1/174 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  I       GY   ++ ++ ++S+  +     EA  +F ++K   + PN+VTY+A++ 
Sbjct: 212 AHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLS 271

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
             G+ G+ +    +++D+M+  G  P  I ++ L+      G+++ A   F +M   GI 
Sbjct: 272 LYGRHGL-YTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIV 330

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
            D   Y  L+DA  K  +   A  +  EM  +   P+ +TY  ++  +A AGRL
Sbjct: 331 PDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 146/568 (25%), Positives = 257/568 (45%), Gaps = 39/568 (6%)

Query: 1   MASTPP--HCSITATKPYQNHQYPHNHLKN------NHHRQSHHPSSRPHWTSHKVS--- 49
           M   PP    S+  +   Q  Q+ H+ +        +HH+  H  S      S+K+S   
Sbjct: 13  MVKIPPLQALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPF 72

Query: 50  LTKPPLSPSPRNAPKPAATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMH 109
            T P L         P+ T+  +  +    H        KS+L  D +       V K  
Sbjct: 73  FTVPSLLHHLTQNQNPSMTTALLYESIINAHL-------KSQLL-DKALIFFNEMVDKGL 124

Query: 110 FGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTF--LLRELG 167
             RP I  S   S+V          F        ++ ++ +F     D Y+F  +++   
Sbjct: 125 VFRPNIFNSLLGSLVRSNCFEKAWLF------FNELKERVKF-----DVYSFGIMIKGCC 173

Query: 168 NRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNT 227
             G   K+ Q       ++   +    + + +I    + G ++ A+  F+     G    
Sbjct: 174 ENGNLDKSFQLLGLL--QDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVAN 231

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
            Y F+ LI+   + G  ++   +F  MK   L PNL TYN +++  CG+G +      ++
Sbjct: 232 QYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKI--CRAFDL 289

Query: 287 FDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           FD+M   GV+ + +T+N+L+  +C    +WEA + L ++M    +  ++ TYNTL+   C
Sbjct: 290 FDEMRERGVEANVVTYNTLIGGMCREERVWEAEK-LVDQMKKAAVSPNLITYNTLIGGFC 348

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
               +D A  ++ ++ +  +SP++VTY+ +I+GY+KAG      ++  EM+  GI   +V
Sbjct: 349 DVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKV 408

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +   ++  Y +L   E+A  +   ME  G+  D   Y  L+ G   +G   E  ++F  M
Sbjct: 409 TCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSM 468

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
               V P+ + Y+T+I  Y K      A+++ RE +  GL  +V  YS++I  LCK+G  
Sbjct: 469 GEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKW 528

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           E A  LLD+M +  ++P+    N I  A
Sbjct: 529 EEAEVLLDKMIELQLKPSASILNMISKA 556



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 226/465 (48%), Gaps = 38/465 (8%)

Query: 201 SILGRLGKVDLAKN--IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           S+LG L + +  +   +F   L E     VY+F  +I     +G   ++  +   ++   
Sbjct: 133 SLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMG 192

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           L PN+V Y  +ID C K G D +     FD M   G+  ++ TF  L+    + GL +  
Sbjct: 193 LSPNVVIYTTLIDGCCKNG-DIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDG 251

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
            +LF +M   G+  +++TYN L++  C   ++  AF++  EM  + +  NVVTY+T+I G
Sbjct: 252 FDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGG 311

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             +  R+ +A  +  +MK   +  + ++YNT++  +  +G  ++A  +  +++S+G+   
Sbjct: 312 MCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPS 371

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VTYN L+ GY K G +  V  +  +M+   +SP+ +T + LID Y +    ++A QI+ 
Sbjct: 372 LVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYS 431

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
             ++ GL  DV +Y  LI  LC  G ++ +  L   M +  + P+ V YN++I  +    
Sbjct: 432 SMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGY---- 487

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
              C  D+  R L   +E              ++  G   N  +  +  ++      GK 
Sbjct: 488 ---CKEDNSYRALRLLRE--------------MEAKGLVPN--VASYSSIIGVLCKDGKW 528

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           E     E+L       KM +L++KP+    ++ILN  S+  +F +
Sbjct: 529 E---EAEVL-----LDKMIELQLKPS----ASILNMISKAKNFTE 561



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 227/465 (48%), Gaps = 37/465 (7%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           +D A   F   +++G       F++L+ +  RS   ++A   FN +K   +K ++ ++  
Sbjct: 109 LDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKE-RVKFDVYSFGI 167

Query: 269 VIDACGKGGVDFK--HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           +I  C + G   K   ++ +  DM   G+ P+ + + +L+  C + G  E AR  F++M 
Sbjct: 168 MIKGCCENGNLDKSFQLLGLLQDM---GLSPNVVIYTTLIDGCCKNGDIERARLFFDKMG 224

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G+  + +T+  L++ + K       F++  +M    + PN+ TY+ +++ Y   G++ 
Sbjct: 225 EMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKIC 284

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            A ++F EM+  G+  + V+YNT++    +  R  EA  +  +M+ + +  + +TYN L+
Sbjct: 285 RAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLI 344

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
           GG+   G  D+   + +Q+K++ +SP+L+TY+ LI+ YSK G +K    + RE +  G+ 
Sbjct: 345 GGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGIS 404

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
              V  + LIDA  +   +E A  +   M K G+ P+V  Y  +I               
Sbjct: 405 PSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMK--------- 455

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
                G  KES+ L    S  +  V+ +    N +I           G  K++N  R   
Sbjct: 456 -----GNMKESSKL--FRSMGEMHVEPSDVIYNTMIH----------GYCKEDNSYRA-- 496

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              L + ++M    + PNV ++S+I+    +   +E+A +LL+++
Sbjct: 497 ---LRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKM 538



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 146/314 (46%), Gaps = 35/314 (11%)

Query: 362 AKNISPNVVT---YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
            +N +P++ T   Y ++I+ + K+  LD AL  F+EM   G+      +N++L    +  
Sbjct: 83  TQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSN 142

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
            FE+A L   E++   ++ D  ++  ++ G  + G  D+  ++   ++   +SPN++ Y+
Sbjct: 143 CFEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYT 201

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           TLID   K G  + A   F +  + GL A+   ++ LI+ L K GL +    L ++M   
Sbjct: 202 TLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKIN 261

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
           G+ PN+ TYN +++ +                 G+ K     D      ++ V+    T 
Sbjct: 262 GLFPNLYTYNCLMNEY----------------CGEGKICRAFDLFDEMRERGVEANVVTY 305

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
           N +I   G    E+  + +K             +  +M K  + PN++T++ ++      
Sbjct: 306 NTLIG--GMCREERVWEAEK-------------LVDQMKKAAVSPNLITYNTLIGGFCDV 350

Query: 659 NSFEDASMLLEELR 672
            + + AS LL++L+
Sbjct: 351 GNLDKASSLLDQLK 364


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 139/538 (25%), Positives = 246/538 (45%), Gaps = 40/538 (7%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           A++ +I  + + G   +A  +FN M +  + P+L TYN V++A C    +D      I  
Sbjct: 218 AYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEA--ILR 275

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M+  GV PD  T+NSL+   S  G W+ A  +  +M  +GI  D+ T N+L+ ++CK  
Sbjct: 276 QMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHG 335

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++  A ++   M  K    ++ +Y  M++GYA  G L D   +F+ M   GI  D   +N
Sbjct: 336 KIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFN 395

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            ++  YAK G  + A ++  EM   G+  D VTY+ ++    + GK D+    F QM   
Sbjct: 396 VLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQ 455

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V+P++ TY  LI  +   G   +A  +  +    G++ D+  ++ +I+ LCK G V  A
Sbjct: 456 GVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDA 515

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
            ++ D     G+ PNV+ YN+++D +       C V  +E  L         D M S   
Sbjct: 516 QNIFDFTISIGLHPNVMVYNTLMDGY-------CLVGKMENAL------RVFDVMVS--- 559

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
                AG   N +  V+G LV      G+ +          L +F+++    IKP+   +
Sbjct: 560 -----AGIQPNVV--VYGTLVNGYCKVGRIDEG--------LSLFREILHKGIKPSTTLY 604

Query: 649 SAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEV 704
           + IL+   +      A +   E+       D   Y +  G L  ++++   +A+ LF E+
Sbjct: 605 NIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGL--FKNSCSDEAILLFKEL 662

Query: 705 KLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSG 762
             M+        N +   ++   +   A+ +     R  +  +V + S +  +L+  G
Sbjct: 663 HAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEG 720



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 230/493 (46%), Gaps = 46/493 (9%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRYNLKPNL 263
           R  +  L    F   L  G G      S L+     +    EA+ +  + M      P++
Sbjct: 120 RAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDV 179

Query: 264 VTYNAVIDA-CG---KGGVDFKHVVEIFDDMLRNGVQ--PDRITFNSLLAVCSRGGLWEA 317
            +Y  V+ + C     G  D     E+   M   G    P+ + +N+++    + G    
Sbjct: 180 FSYCIVLKSLCSDRKSGQAD-----ELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNK 234

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A +LFNEMV RGI  D+ TYN +++A+CK   MD A  I+ +M  K + P+  TY+++I 
Sbjct: 235 ACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIY 294

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GY+  G+  +A+ +  +M   GI  D V+ N++++   K G+ ++A  V   M   G + 
Sbjct: 295 GYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKT 354

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  +Y  +L GY  +G   ++  +F  M +D ++P+   ++ LI  Y+K G+   A  IF
Sbjct: 355 DIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIF 414

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E ++ G++ DVV YS +I ALC+ G ++ AV   ++M  +G+ P++ TY+ +I  F   
Sbjct: 415 NEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGF--- 471

Query: 558 ATTECTVDDV--ERDLGKQKESANL--DAMCSQ-DDKDVQEAGRT-DNQII--------- 602
               CT  D+   +DL  Q  +  +  D  C      ++ + GR  D Q I         
Sbjct: 472 ----CTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGL 527

Query: 603 ----KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
                V+  L+      GK EN  R        VF  M    I+PNVV +  ++N   + 
Sbjct: 528 HPNVMVYNTLMDGYCLVGKMENALR--------VFDVMVSAGIQPNVVVYGTLVNGYCKV 579

Query: 659 NSFEDASMLLEEL 671
              ++   L  E+
Sbjct: 580 GRIDEGLSLFREI 592



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 194/360 (53%), Gaps = 16/360 (4%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VDL + +F   L++G     + F+ LI AY + G    A  +FN M+   ++P++VTY+ 
Sbjct: 373 VDLTE-LFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYST 431

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           VI A C  G +D    VE F+ M+  GV P   T++ L+   C+ G L +A ++L  +M+
Sbjct: 432 VIAALCRIGKMD--DAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKA-KDLVLQMM 488

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
           ++G+  DI  +N +++ +CK  ++  A  I     +  + PNV+ Y+T++DGY   G+++
Sbjct: 489 NKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKME 548

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +AL +F  M   GI  + V Y T+++ Y K+GR +E L + +E+   GI+     YN +L
Sbjct: 549 NALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIIL 608

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK-----EAMQIFREFK 501
            G  + G+    +  F +M    ++ +  TYS ++     GGL+K     EA+ +F+E  
Sbjct: 609 HGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVL-----GGLFKNSCSDEAILLFKELH 663

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
              +K D+   + +I  + +   VE A  L   +++ G+ P+VVTY+ ++    +    E
Sbjct: 664 AMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVE 723



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 210/414 (50%), Gaps = 15/414 (3%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-----S 197
           IL++   K    D++T+  L+    + G+W +A       V+  ++   QG L      +
Sbjct: 273 ILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEA-------VRVSKKMTSQGILPDVVTLN 325

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++++ L + GK+  A+++F++   +G    ++++  +++ Y   G   +   +FN M   
Sbjct: 326 SLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSD 385

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            + P+   +N +I A  K G+       IF++M   GV+PD +T+++++A   R G  + 
Sbjct: 386 GIAPDSHIFNVLIKAYAKCGM-LDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDD 444

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A   FN+M+ +G+   I TY+ L+   C    +  A +++ +M  K + P++  ++ +I+
Sbjct: 445 AVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIIN 504

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
              K GR+ DA N+F     +G+  + + YNT++  Y  +G+ E AL V   M S+GI+ 
Sbjct: 505 NLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQP 564

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + V Y  L+ GY K G+ DE   +F ++    + P+   Y+ ++    + G    A   F
Sbjct: 565 NVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKF 624

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            E  ++G+  D   YS ++  L KN   + A+ L  E+    ++ ++ T N +I
Sbjct: 625 HEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMI 678



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 181/341 (53%), Gaps = 1/341 (0%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDF 280
           ++G    V   ++L+++  + G  ++A  VF+SM     K ++ +Y  +++     G   
Sbjct: 314 SQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGC-L 372

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
             + E+F+ ML +G+ PD   FN L+   ++ G+ + A  +FNEM  +G++ D+ TY+T+
Sbjct: 373 VDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTV 432

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           + A+C+  +MD A E   +M  + ++P++ TY  +I G+   G L  A ++  +M   G+
Sbjct: 433 IAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGM 492

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D   +N +++   KLGR  +A  +     S G+  + + YN L+ GY   GK +   R
Sbjct: 493 RPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALR 552

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F+ M +  + PN++ Y TL++ Y K G   E + +FRE    G+K    LY+ ++  L 
Sbjct: 553 VFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLF 612

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + G    A     EMT+ GI  +  TY+ ++    +++ ++
Sbjct: 613 QAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSD 653



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 187/402 (46%), Gaps = 4/402 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +  L++     G   +A     F   RE+         S +I+ L R+GK+D A   F  
Sbjct: 394 FNVLIKAYAKCGMLDRAT--IIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQ 451

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +++G   ++  +  LI  +   G   +A  +   M    ++P++  +N +I+   K G 
Sbjct: 452 MIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLG- 510

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                  IFD  +  G+ P+ + +N+L+      G  E A  +F+ MV  GI  ++  Y 
Sbjct: 511 RVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYG 570

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL++  CK  ++D    +  E+  K I P+   Y+ ++ G  +AGR   A   F EM   
Sbjct: 571 TLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTES 630

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI +DR +Y+ VL    K    +EA+L+ KE+ +  ++ D  T N ++ G  +  + +E 
Sbjct: 631 GIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEA 690

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL-KADVVLYSALID 517
           + +F  +    + P+++TYS ++    K GL +EA  +F   + AG  + +  L + ++ 
Sbjct: 691 KDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVR 750

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
            L +   +  A + L ++ +     +  T   +ID F    T
Sbjct: 751 ELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSSKGT 792


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 194/397 (48%), Gaps = 37/397 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++I  L +  K + +  + E  +  G    V+AF+ ++  + RS   ++A  V+  M  
Sbjct: 14  SSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVE 73

Query: 257 YNLKPNLVTYNAVIDACGK-GGVD---------------------------------FKH 282
              KP+ V+Y+ +I    K G +D                                   H
Sbjct: 74  SGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDH 133

Query: 283 VVEIFDDMLRNGVQPDRITFNSL-LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
              +FD+M+R G  PDR+ F  L L +C  G + +A+   F +M   G   ++  YN LL
Sbjct: 134 ASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASER-FKQMPKHGCQPNVPVYNVLL 192

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             +C   Q++ A  + AEM + + SP+VVTY+T++D   KA R+++   +F  M+  G  
Sbjct: 193 HGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYV 252

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + ++++T++    + G  E+AL V   M  +G + +  TY  L+ G  +  K  + R +
Sbjct: 253 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAREL 312

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK-QAGLKADVVLYSALIDALC 520
           FE+M   C+ P+ + Y++LI  Y K G   EA +++RE    AGL+  +V ++ LID  C
Sbjct: 313 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 372

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           K G +  A  L+ EM  +G+  +  TY  +I    R+
Sbjct: 373 KLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRA 409



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 187/394 (47%), Gaps = 41/394 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L ++GK+D +  I    +  G   ++ A+S+L+ A  ++     A S+F+ M R  
Sbjct: 86  LIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGG 145

Query: 259 LKPN-LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
             P+ L+ Y  ++  C  G V  K   E F  M ++G QP+   +N LL  +CS G L E
Sbjct: 146 HHPDRLMFYELILGLCQAGKV--KDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQL-E 202

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF EM       D+ TYNTLLDA+CK  +++   ++   M A    PNV+T+ST+I
Sbjct: 203 QANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLI 262

Query: 377 DGYAKAGRLDDALNMFSEMKFLG-----------------------------------IG 401
            G  + G L+ AL +F  M   G                                   I 
Sbjct: 263 HGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIP 322

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMES-SGIRKDAVTYNALLGGYGKQGKYDEVRR 460
            D V+YN++++ Y K G  +EA  + +EM   +G++   VT+N L+ G+ K GK      
Sbjct: 323 PDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANE 382

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +  +M    ++ +  TY  LI   S+     EA++++++ ++     D V   + +  LC
Sbjct: 383 LVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLC 442

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           K G ++ A ++ +   K G  PN  T+  + ++ 
Sbjct: 443 KTGNIDQAYAVFEATRKSGAVPNPETFRILSESL 476



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 162/304 (53%), Gaps = 1/304 (0%)

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           M+  N+  N+ TY+++I +  K     +   ++ ++M+  G  PD   FN ++   +R  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKP-EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSN 59

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             E AR ++  MV  G   D  +Y+ L+  + K  ++D + +I++EM  +  +P++  YS
Sbjct: 60  NMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYS 119

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           +++   AKA R+D A ++F EM   G   DR+ +  ++    + G+ ++A    K+M   
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH 179

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G + +   YN LL G    G+ ++   +F +MK+   SP+++TY+TL+D   K    +E 
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEG 239

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            ++F   + AG   +V+ +S LI  LC+ G +E A+ +   M + G +PN  TY ++I  
Sbjct: 240 CKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISG 299

Query: 554 FGRS 557
             R+
Sbjct: 300 LCRA 303



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 215/465 (46%), Gaps = 36/465 (7%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V+ +S++I +  +    +E+  V   M      P++  +N V+    +   + +   E++
Sbjct: 10  VFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSN-NMEKAREVY 68

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
             M+ +G +PD ++++ L+   ++ G  + +  + +EMV RG    +  Y++L+ A+ K 
Sbjct: 69  QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            ++D A  +  EM      P+ + +  +I G  +AG++ DA   F +M   G   +   Y
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N +L      G+ E+A  +  EM+S     D VTYN LL    K  + +E  ++FE M+A
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRA 248

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
               PN++T+STLI    + G  ++A+++F    +AG K +   Y+ LI  LC+   V  
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
           A  L ++MT+  I P+ V YNS+I  + +      ++D+ E+   +    A L       
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLIAGYCKRG----SMDEAEKLYREMSGGAGL------- 357

Query: 588 DKDVQEAGRTDNQIIKVF---------GQLVAEKAGQGKKENRCRQEILC---------- 628
               Q    T N +I  F          +LVAE   +G   + C   IL           
Sbjct: 358 ----QPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLD 413

Query: 629 -ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             L V+++M + K   + V+  + +    +  + + A  + E  R
Sbjct: 414 EALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATR 458



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 148/302 (49%), Gaps = 2/302 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+++ A  +F    +      V  ++ L+ A  ++   +E   +F +M+     PN++T+
Sbjct: 199 GQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITF 258

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           + +I    + G + +  +E+F  ML  G +P++ T+ +L++   R      AR LF +M 
Sbjct: 259 STLIHGLCRTG-ELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMT 317

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA-KNISPNVVTYSTMIDGYAKAGRL 385
              I  D   YN+L+   CK   MD A ++  EM     + P +VT++T+IDG+ K G+L
Sbjct: 318 QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKL 377

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             A  + +EM   G+  D  +Y  +++  ++  + +EAL V K+M       D V+  + 
Sbjct: 378 GRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF 437

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +GG  K G  D+   +FE  +     PN  T+  L +   K G  ++A ++    K   +
Sbjct: 438 VGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 497

Query: 506 KA 507
            A
Sbjct: 498 TA 499



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 181/364 (49%), Gaps = 30/364 (8%)

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M  + I  ++FTY++++ ++ K A+ + +++++ EM A   +P+V  ++ ++ G+A++  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           ++ A  ++  M   G   D VSY+ ++   AK+G+ +E+L +  EM   G       Y++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+    K  + D    +F++M      P+ L +  LI    + G  K+A + F++  + G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE--C 562
            + +V +Y+ L+  LC +G +E A +L  EM      P+VVTYN+++DA  ++   E  C
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 563 TVDDVERDLGKQKE----SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
            + +  R  G        S  +  +C   + +         + ++VFG ++      G K
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELE---------KALEVFGSMLE----AGCK 287

Query: 619 ENR----------CRQE-ILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
            N+          CR E ++    +F+KM +  I P+ V +++++    +  S ++A  L
Sbjct: 288 PNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 347

Query: 668 LEEL 671
             E+
Sbjct: 348 YREM 351



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 152/311 (48%), Gaps = 6/311 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL  L + G+  +A   FA  +K      D     + ++  + +  +V+    +FE 
Sbjct: 188 YNVLLHGLCSSGQLEQANTLFA-EMKSHSCSPDVVTY-NTLLDAVCKARRVEEGCKLFEA 245

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               GY   V  FS LI    R+G  ++A+ VF SM     KPN  TY  +I    +   
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAE- 304

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVH-RGIDQDIFT 336
                 E+F+ M +  + PD + +NSL+A  C RG + EA + L+ EM    G+   I T
Sbjct: 305 KVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEK-LYREMSGGAGLQPTIVT 363

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           +NTL+D  CK  ++  A E++AEM  K ++ +  TY  +I G ++A +LD+AL ++ +M+
Sbjct: 364 FNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMR 423

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
                LD VS  + +    K G  ++A  V +    SG   +  T+  L     K G+ +
Sbjct: 424 EKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVE 483

Query: 457 EVRRMFEQMKA 467
           + +++ E  KA
Sbjct: 484 DAQKLMEPAKA 494


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 243/487 (49%), Gaps = 24/487 (4%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+   R  + DL   +F   L  G G  V++++ALI  + + G   +A  +F  M+   
Sbjct: 124 LINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQG 183

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           + PN+VTY+++I+   K   +      +   M+  GV+P+ +T+N L+   S  G+W+ +
Sbjct: 184 IMPNVVTYSSLINGLCKTK-EMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKES 242

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +F EM    +  D+   N+ + A+CK  ++  A +I   M  K   P+V++Y  ++ G
Sbjct: 243 VRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHG 302

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           YA AG +    N+F+ M   G+  DR  +NT+++ YA+LG  +++LL+ ++M   G+  D
Sbjct: 303 YATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPD 362

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            +T++ ++  + + G+ D+    F  M    V P+   YS LI          +A ++  
Sbjct: 363 IITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELIS 422

Query: 499 EFKQAGLKADVV-LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           +    G+    +  ++++I+ LCK G V     ++D +   G RPN++T+NS++D +   
Sbjct: 423 DMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGY--- 479

Query: 558 ATTECTVDDVERDLG--KQKESANLDAMCSQDDKDVQ---EAGRTDNQIIKVFGQLVAEK 612
               C V +++  +G     ES  ++      +  V    + GR D+  + +F  ++ ++
Sbjct: 480 ----CLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDA-LTLFRDMLHKR 534

Query: 613 AGQGKKEN--------RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
                           + R+ I+    +F +M +  +  ++ T++ +L    R N  ++A
Sbjct: 535 VTLTSVSYNIILHGLFQARRTIVA-KEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEA 593

Query: 665 SMLLEEL 671
           +MLLE+L
Sbjct: 594 NMLLEKL 600



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 201/408 (49%), Gaps = 14/408 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-----SAMISILGRLGKVDLAK 213
           Y  L+      GE  KA   F    K EE    QG +      S++I+ L +  ++D A+
Sbjct: 156 YNALIDGFSKEGEVDKAHDLF---YKMEE----QGIMPNVVTYSSLINGLCKTKEMDKAE 208

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
            +    +  G       ++ LI  Y  SG  +E++ VF  M    L P++   N+ + A 
Sbjct: 209 RVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTAL 268

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
            K G   K   +IFD M+  G +PD I++ +LL   +  G      NLFN MV  G+  D
Sbjct: 269 CKHG-RIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPD 327

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
              +NTL++A  +   MD +  +  +M  + ++P+++T+ST+I  + + GRLDDA+  F+
Sbjct: 328 RHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFN 387

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT-YNALLGGYGKQ 452
            M   G+  D   Y+ ++          +A  +  +M S GI    +  + +++    K+
Sbjct: 388 HMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKE 447

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G+  E + + + +      PNL+T+++L+D Y   G  KEA+ +    +  G++ D+  Y
Sbjct: 448 GRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTY 507

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           + L+D  CK+G ++ A++L  +M  + +    V+YN I+    ++  T
Sbjct: 508 NTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRT 555



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 259/559 (46%), Gaps = 70/559 (12%)

Query: 204 GRLGKVDLAKNIF-ETALNEGYGNTVYAFSALISAYGR---SGYCQE----AISVFNSMK 255
           G LG  D A+++F E  L           + L+SA  R   S  C++    A+ +F  M 
Sbjct: 49  GTLGPDD-ARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMD 107

Query: 256 RY---NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           R       P + TYN +I+ C +        + +F  +LR G+ PD  ++N+L+   S+ 
Sbjct: 108 RCACPEAAPTIYTYNILIN-CYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKE 166

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  + A +LF +M  +GI  ++ TY++L++ +CK  +MD A  ++ +M    + PN +TY
Sbjct: 167 GEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTY 226

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +I GY+ +G   +++ +F EM    +  D  + N+ ++   K GR +EA  +   M  
Sbjct: 227 NCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVL 286

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G + D ++Y ALL GY   G    +  +F  M  + V P+   ++TLI+ Y++ G+  +
Sbjct: 287 KGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDK 346

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           ++ +F +  + G+  D++ +S +I A C+ G ++ A+   + M   G+ P+   Y+ +I 
Sbjct: 347 SLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQ 406

Query: 553 AFGRSATTECTVDDVERDLGKQKE------------------SANLDAMCSQ----DDKD 590
                   +C      RDL K KE                  ++ ++ +C +    + KD
Sbjct: 407 G-------QCN----RRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKD 455

Query: 591 VQE----AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
           V +     G+  N I   F  LV      G  +          +G+   M  + ++P++ 
Sbjct: 456 VVDLIIHTGQRPNLI--TFNSLVDGYCLVGNMKE--------AVGLLDSMESVGVEPDIY 505

Query: 647 TFSAILNACSRCNSFEDA-----SMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLF 701
           T++ +++   +    +DA      ML + + L       + HGL    R    + A  +F
Sbjct: 506 TYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARR---TIVAKEMF 562

Query: 702 DEVKLMDSSTASAFYNALT 720
            E  +++S  A + +   T
Sbjct: 563 HE--MIESGMAVSIHTYAT 579



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 182/396 (45%), Gaps = 41/396 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+   RLG +D +  +FE    +G    +  FS +ISA+ R G   +A+  FN M  
Sbjct: 332 NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 391

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGV-------------------- 295
             + P+   Y+ +I   C +   D     E+  DML  G+                    
Sbjct: 392 TGVPPDTAVYSCLIQGQCNRR--DLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR 449

Query: 296 ----------------QPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                           +P+ ITFNSL+   C  G + EA   L + M   G++ DI+TYN
Sbjct: 450 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAV-GLLDSMESVGVEPDIYTYN 508

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+D  CK  ++D A  +  +M  K ++   V+Y+ ++ G  +A R   A  MF EM   
Sbjct: 509 TLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIES 568

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+ +   +Y TVL    +    +EA ++ +++ S  ++ D +T+N ++    K G+  E 
Sbjct: 569 GMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEA 628

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
           + +F  +    + P +LTY  +I    K   +++A  +F   +++    D  + + +I  
Sbjct: 629 KELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRM 688

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           L   G V  A + L ++ K+GI P   T + +I  F
Sbjct: 689 LLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLF 724



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 161/338 (47%), Gaps = 8/338 (2%)

Query: 202 ILGRLGKVDL--AKNIFETALNEGYGN-TVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           I G+  + DL  AK +    L++G     +  F+++I+   + G   E   V + +    
Sbjct: 405 IQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 464

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            +PNL+T+N+++D  C  G  + K  V + D M   GV+PD  T+N+L+    + G  + 
Sbjct: 465 QRPNLITFNSLVDGYCLVG--NMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDD 522

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  LF +M+H+ +     +YN +L  + +  +  +A E+  EM    ++ ++ TY+T++ 
Sbjct: 523 ALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLG 582

Query: 378 GYAKAGRLDDALNMFSEMKF-LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           G  +    D+A NM  E  F + +  D +++N V+    K+GR +EA  +   + + G+ 
Sbjct: 583 GLCRNNCTDEA-NMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLV 641

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              +TY  ++    K+  +++   +F  M+    +P+    + +I +    G   +A   
Sbjct: 642 PTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNY 701

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
             +  + G+  +    S LI     NG     + LL E
Sbjct: 702 LSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 739


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 232/484 (47%), Gaps = 36/484 (7%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V A++ +I  + + G   +A  +F  M +  + P+LVTY++V+ A  K     K   E F
Sbjct: 223 VVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGK--AEAF 280

Query: 288 -DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M+  GV PD  T+N+L+   S  G W+ A  +F EM    I  D+ T N L+ ++CK
Sbjct: 281 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCK 340

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A ++   M  K  +P+V +Y  M++GYA  G L D  ++F  M   GI  D  +
Sbjct: 341 YGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 400

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           ++ ++  YA  G  ++A+++  EM   G++ D VTY  ++    + GK D+    F QM 
Sbjct: 401 FSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMI 460

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V+P+   Y  LI  +   G   +A ++  E    G++ D+V +S++I+ LCK G + 
Sbjct: 461 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIM 520

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A ++ D     G  P+ V Y+ ++D +       C V  +E+ L         DAM S 
Sbjct: 521 DAQNIFDLTVNVGQHPDAVVYSMLMDGY-------CLVGKMEKAL------RVFDAMVS- 566

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
                  AG   N +  V+G LV      G+ +          L +F++M +  IKP+ +
Sbjct: 567 -------AGIEPNVV--VYGTLVNGYCKIGRIDEG--------LSLFREMLQKGIKPSTI 609

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEV 704
            ++ I++          A +   E+      +    + +++   +++  + +A+ LF E+
Sbjct: 610 LYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKEL 669

Query: 705 KLMD 708
           + M+
Sbjct: 670 RAMN 673



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 207/396 (52%), Gaps = 3/396 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT ++      G+ +KA   F   V+R    +      S+++  L +   +  A+     
Sbjct: 226 YTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTY--SSVVHALCKARAMGKAEAFLRQ 283

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +N+G     + ++ LI  Y  +G  +EA+ VF  M+R+++ P++VT N ++ +  K G 
Sbjct: 284 MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYG- 342

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K   ++FD M   G  PD  ++  +L   +  G      +LF+ M+  GI  DI+T++
Sbjct: 343 KIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFS 402

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+ A      +D A  I  EM    + P+VVTY+T+I    + G++DDA+  F++M   
Sbjct: 403 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQ 462

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D+ +Y+ ++  +   G   +A  +  E+ ++G+R D V +++++    K G+  + 
Sbjct: 463 GVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDA 522

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
           + +F+        P+ + YS L+D Y   G  ++A+++F     AG++ +VV+Y  L++ 
Sbjct: 523 QNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNG 582

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            CK G ++  +SL  EM ++GI+P+ + YN IID  
Sbjct: 583 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 618



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 225/468 (48%), Gaps = 54/468 (11%)

Query: 118 STRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSKA 175
           S  H++    A+    AF R  V+ G +           D++T+  L+    + G+W +A
Sbjct: 263 SVVHALCKARAMGKAEAFLRQMVNKGVL----------PDNWTYNNLIYGYSSTGQWKEA 312

Query: 176 IQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETA---------------- 219
           ++ F   ++R     D   L   M S L + GK+  A+++F+T                 
Sbjct: 313 VRVFK-EMRRHSILPDVVTLNMLMGS-LCKYGKIKEARDVFDTMAMKGQNPDVFSYKIML 370

Query: 220 -------------------LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
                              L +G    +Y FS LI AY   G   +A+ +FN M+ + +K
Sbjct: 371 NGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVK 430

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAA 318
           P++VTY  VI A C  G +D    +E F+ M+  GV PD+  ++ L+   C+ G L +A 
Sbjct: 431 PDVVTYTTVIAALCRIGKMD--DAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA- 487

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           + L  E+++ G+  DI  ++++++ +CK  ++  A  I          P+ V YS ++DG
Sbjct: 488 KELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDG 547

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y   G+++ AL +F  M   GI  + V Y T+++ Y K+GR +E L + +EM   GI+  
Sbjct: 548 YCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 607

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            + YN ++ G    G+    +  F +M    ++ N  TY+ ++  + K   + EA+ +F+
Sbjct: 608 TILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFK 667

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
           E +   +K D++  + +I  + +   VE A  L   +++ G+ P VVT
Sbjct: 668 ELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 227/493 (46%), Gaps = 46/493 (9%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMKRYNLKPNL 263
           R  + +LA   F   L  G    +   + L+  +  +    EA+ +  +        P++
Sbjct: 127 RAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDV 186

Query: 264 VTYNAVIDAC---GKGGVDFKHVVEIFDDMLRNGVQ------PDRITFNSLLAVCSRGGL 314
            +Y+ ++ +    GK G          DD+LR   +      PD + + +++    + G 
Sbjct: 187 FSYSILLKSLCDQGKSGQA--------DDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGD 238

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A +LF EMV RGI  D+ TY++++ A+CK   M  A   + +M  K + P+  TY+ 
Sbjct: 239 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNN 298

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I GY+  G+  +A+ +F EM+   I  D V+ N ++    K G+ +EA  V   M   G
Sbjct: 299 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKG 358

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D  +Y  +L GY  +G   ++  +F+ M  D ++P++ T+S LI  Y+  G+  +AM
Sbjct: 359 QNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAM 418

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            IF E +  G+K DVV Y+ +I ALC+ G ++ A+   ++M  +G+ P+   Y+ +I  F
Sbjct: 419 IIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGF 478

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK-- 612
                  CT       L K KE   L+ M +    D+       N + K+   + A+   
Sbjct: 479 -------CT----HGSLLKAKELI-LEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIF 526

Query: 613 ---AGQGKKENRCRQEIL----CILG-------VFQKMHKLKIKPNVVTFSAILNACSRC 658
                 G+  +     +L    C++G       VF  M    I+PNVV +  ++N   + 
Sbjct: 527 DLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKI 586

Query: 659 NSFEDASMLLEEL 671
              ++   L  E+
Sbjct: 587 GRIDEGLSLFREM 599



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 140/580 (24%), Positives = 248/580 (42%), Gaps = 99/580 (17%)

Query: 211 LAKNIFETALNEGYGNTV-----YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           LA  +F  A +   G  V     + ++ L+    R+   + A++ F  + R  L+ +++ 
Sbjct: 93  LAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIII 152

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRN----GVQPDRITFNSLL-AVCSRGGLWEAARN 320
            N ++    KG  + K   E  D +L      G  PD  +++ LL ++C +G   +A  +
Sbjct: 153 ANHLL----KGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA-DD 207

Query: 321 LFNEMVHRG--IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           L   M   G     D+  Y T++D   K   ++ A ++  EM  + I P++VTYS+++  
Sbjct: 208 LLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 267

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             KA  +  A     +M   G+  D  +YN ++  Y+  G+++EA+ V KEM    I  D
Sbjct: 268 LCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 327

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VT N L+G   K GK  E R +F+ M     +P++ +Y  +++ Y+  G   +   +F 
Sbjct: 328 VVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFD 387

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
                G+  D+  +S LI A    G+++ A+ + +EM   G++P+VVTY ++I A  R  
Sbjct: 388 LMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCR-- 445

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
                                               G+ D+ + K F Q++ +     K 
Sbjct: 446 -----------------------------------IGKMDDAMEK-FNQMIDQGVAPDKY 469

Query: 619 ENRCRQEILCILGVFQKMHKL-------KIKPNVVTFSAILNACSRCNSFEDA------- 664
              C  +  C  G   K  +L        ++ ++V FS+I+N   +     DA       
Sbjct: 470 AYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLT 529

Query: 665 ------------SMLLE----------ELRLFDNQVYG------VAHGLLM-GY-RDNIW 694
                       SML++           LR+FD  V        V +G L+ GY +    
Sbjct: 530 VNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRI 589

Query: 695 VQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
            + LSLF E+       ++  YN + D L+  G+   A++
Sbjct: 590 DEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKV 629


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 191/371 (51%), Gaps = 11/371 (2%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+ L  + +V    +     +  GY   V  +++LI          EA  +F  M++  
Sbjct: 132 LINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLG 191

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGV-------QPDRITFNSLLAVCS 310
             PN+VTY  +I   C  G ++    +++  +ML NG        +P+  ++N ++    
Sbjct: 192 CWPNVVTYGTLIKGLCRTGNINL--ALKLHQEML-NGTSPYAINCKPNIFSYNIIIDELC 248

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           + G W+ A+ LFNEMV +G+  D+ T++ L+D +CK   +  A + +  M  + I P++ 
Sbjct: 249 KIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLF 308

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           T++++I+G+   G LD A  +F  M   G   D +SY  ++  Y K    EEA+ +  EM
Sbjct: 309 TFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEM 368

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
              G   D  T+  LL G    GK  + +++F  +K   V  NL   S  +D   K G  
Sbjct: 369 LRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCL 428

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            EAM++F E K   +K D+  ++ LID LCK   +E+A  L +++++EG++P+VVTY  +
Sbjct: 429 FEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIM 488

Query: 551 IDAFGRSATTE 561
           I+ F ++   +
Sbjct: 489 INGFCKNGQVD 499



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 197/393 (50%), Gaps = 12/393 (3%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR------YNLKP 261
           ++  A  +F      G    V  +  LI    R+G    A+ +   M         N KP
Sbjct: 176 RISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKP 235

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           N+ +YN +ID   K G  +K    +F++M+  GV+PD +TF++L+    + G+   A+  
Sbjct: 236 NIFSYNIIIDELCKIG-KWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKF 294

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
              M+ RGI  D+FT+ +L++  C    +D A E+   MP+K   P+V++Y+ +I GY K
Sbjct: 295 LETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCK 354

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
              +++A+ +++EM  +G   D  ++  +L      G+  +A  +   ++   + K+   
Sbjct: 355 TFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYI 414

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
            +  L G  K G   E   +F ++K+  +  ++ +++ LID   K    + A ++F +  
Sbjct: 415 CSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLS 474

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           Q GL+ DVV Y  +I+  CKNG V++A  L   M + G  PN++TY++++  F ++   E
Sbjct: 475 QEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLE 534

Query: 562 CTVDDVERDLGKQKESAN-----LDAMCSQDDK 589
             V  + + + K    A      ++ M S+D+K
Sbjct: 535 EVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEK 567



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 188/382 (49%), Gaps = 15/382 (3%)

Query: 198 AMISILGRLGKVDLAKNIFETALN--EGYG----NTVYAFSALISAYGRSGYCQEAISVF 251
            +I  L R G ++LA  + +  LN    Y       +++++ +I    + G  +EA  +F
Sbjct: 201 TLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLF 260

Query: 252 NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLL-A 307
           N M    ++P++VT++A+ID   K G+    V+E     + M+  G+ PD  TF SL+  
Sbjct: 261 NEMVDQGVRPDVVTFSALIDTLCKEGM----VIEAKKFLETMMLRGIVPDLFTFTSLIEG 316

Query: 308 VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
            C  G L ++A+ LF  M  +G + D+ +Y  L+   CK   ++ A ++  EM      P
Sbjct: 317 FCLVGDL-DSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWP 375

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           ++ T+  ++ G   AG++ DA  +F  +K   +  +    +  L    K G   EA+ + 
Sbjct: 376 DMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELF 435

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
            E++S  ++ D  ++N L+ G  K  K +    +FE++  + + P+++TY  +I+ + K 
Sbjct: 436 NELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKN 495

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G    A  +F+  ++ G   +++ YSAL+    KN  +E  V LL +M ++ +      Y
Sbjct: 496 GQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIY 555

Query: 548 NSIIDAFGRSATTECTVDDVER 569
             + D   +       +D ++R
Sbjct: 556 TIVEDMVSKDEKCREWLDILQR 577



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/510 (24%), Positives = 228/510 (44%), Gaps = 70/510 (13%)

Query: 270 IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
           I  C KG +     ++ FD M+R+      I+FN LL   ++   +    +L+ +M   G
Sbjct: 67  IHNCKKGNITSTQALQFFDLMMRS-----IISFNLLLGALAKIKHYSQVFSLYKKMHLAG 121

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  + FT N L++ +C   ++      MA +  +   P+VVTY+++I G     R+ +A 
Sbjct: 122 LSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEAT 181

Query: 390 NMFSEMKFLGI------------GLDRV-----------------------------SYN 408
            +F  M+ LG             GL R                              SYN
Sbjct: 182 RLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYN 241

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            ++    K+G+++EA  +  EM   G+R D VT++AL+    K+G   E ++  E M   
Sbjct: 242 IIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLR 301

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + P+L T+++LI+ +   G    A ++F      G + DV+ Y+ LI   CK   VE A
Sbjct: 302 GIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEA 361

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA---NLDAMCS 585
           + L +EM + G  P++ T+  ++     +      V D ++  G  K  A   NL  +CS
Sbjct: 362 MKLYNEMLRVGKWPDMKTFCVLLKGLFLAG----KVGDAKKLFGVVKPHAVPKNL-YICS 416

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC-------ILGVFQKMHK 638
                + + G    + +++F +L +       +   C  + LC          +F+K+ +
Sbjct: 417 VFLDGLCKNG-CLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQ 475

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASML---LEELRLFDNQVY--GVAHGLLMGYRDNI 693
             ++P+VVT+  ++N   +    ++A++L   +EE     N +    + HG    Y++N 
Sbjct: 476 EGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGF---YKNNK 532

Query: 694 WVQALSLFDEVKLMDSSTASAFYNALTDML 723
             + + L  ++   D S A++ Y  + DM+
Sbjct: 533 LEEVVKLLHKMIQKDVSLAASIYTIVEDMV 562



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 173/342 (50%), Gaps = 3/342 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  ++ EL   G+W +A + F   V +  R +      SA+I  L + G V  AK   ET
Sbjct: 240 YNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVT--FSALIDTLCKEGMVIEAKKFLET 297

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +  G    ++ F++LI  +   G    A  +F SM     +P++++Y  +I    K   
Sbjct: 298 MMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKT-F 356

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           + +  ++++++MLR G  PD  TF  LL      G    A+ LF  +    + ++++  +
Sbjct: 357 NVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICS 416

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
             LD +CK   +  A E+  E+ + N+  ++ +++ +IDG  KA +L+ A  +F ++   
Sbjct: 417 VFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQE 476

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D V+Y  +++ + K G+ + A ++ + ME +G   + +TY+ALL G+ K  K +EV
Sbjct: 477 GLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEV 536

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
            ++  +M    VS     Y+ + D+ SK    +E + I + F
Sbjct: 537 VKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQRF 578


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 205/400 (51%), Gaps = 11/400 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT ++      G+  KA   +   + R  R +      S++I+ L +   +D A  +  T
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDR--RISPDVVTYSSIIAALCKGQAMDKAMEVLTT 256

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +  G       +++++  Y  S   +EAI     M+   ++P++VTYN+++D   K G 
Sbjct: 257 MVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 316

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
                 +IFD M + G++PD  T+ +LL    ++G L E    L + MV  GI  D   +
Sbjct: 317 S-TEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEM-HALLDLMVRNGIHPDHHVF 374

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L+ A  K  ++D A  + ++M    ++PNVVTY  +I    K+G +DDA+  F +M  
Sbjct: 375 NILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMID 434

Query: 398 LGIGLDRVSYNTV---LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
            G+  + + Y ++   L I+ K  + EE +L   EM   GI  + + +N+++  + K+G+
Sbjct: 435 EGLTPNIIVYTSLIHSLCIFDKWDKAEELIL---EMLDRGICLNTIFFNSIIHSHCKEGR 491

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
             E  ++F+ M    V PN++TYSTLID Y   G   EA ++       G+K D V Y+ 
Sbjct: 492 VIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNT 551

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           LI+  C+   ++ A++L  EM   G+ PN++TYN I+   
Sbjct: 552 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 135/544 (24%), Positives = 250/544 (45%), Gaps = 44/544 (8%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKRY 257
           +I    R G++DL        + +G+      F+ L+          +A+  V   M   
Sbjct: 93  LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFD------DMLRNGVQPDRITFNSLLAVCSR 311
           +  P++ +   ++    KG  D     E  +      D    G  PD +++ +++    +
Sbjct: 153 SCMPDVFSCTILL----KGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFK 208

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            G  + A + ++EM+ R I  D+ TY++++ A+CKG  MD A E++  M    + PN +T
Sbjct: 209 EGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMT 268

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y++++ GY  + +  +A+    +M+  G+  D V+YN+++    K GR  EA  +   M 
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMT 328

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G+  D  TY  LL GY  +G   E+  + + M  + + P+   ++ LI  Y+K     
Sbjct: 329 KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVD 388

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EAM +F + +Q GL  +VV Y A+I  LCK+G V+ A+   ++M  EG+ PN++ Y S+I
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
            +        C  D  ++      E   L+ +         + G   N I   F  ++  
Sbjct: 449 HSL-------CIFDKWDK-----AEELILEML---------DRGICLNTIF--FNSIIHS 485

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              +G+        ++    +F  M ++ +KPNV+T+S +++        ++A+ LL  +
Sbjct: 486 HCKEGR--------VIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537

Query: 672 RLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQK 729
                +   V +  L+ GY R +    AL+LF E+     S     YN +   L+H  + 
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 597

Query: 730 RGAQ 733
             A+
Sbjct: 598 AAAK 601



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 175/321 (54%), Gaps = 3/321 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIF 287
           + F+ LI AY +     EA+ VF+ M+++ L PN+VTY AVI   C  G VD    +  F
Sbjct: 372 HVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVD--DAMLYF 429

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           + M+  G+ P+ I + SL+        W+ A  L  EM+ RGI  +   +N+++ + CK 
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKE 489

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            ++  + ++   M    + PNV+TYST+IDGY  AG++D+A  + S M  +G+  D V+Y
Sbjct: 490 GRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTY 549

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           NT+++ Y ++ R ++AL + KEM SSG+  + +TYN +L G     +    + ++  +  
Sbjct: 550 NTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITK 609

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
                 L TY+ ++    K  L  EA+++F+      L+ +   ++ +I AL K G  + 
Sbjct: 610 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 669

Query: 528 AVSLLDEMTKEGIRPNVVTYN 548
           A  L   ++  G+ P+V TY+
Sbjct: 670 AKDLFAALSANGLVPDVRTYS 690



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 178/342 (52%), Gaps = 3/342 (0%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD 279
           ++G    V  +++L+    ++G   EA  +F+SM +  L+P++ TY  ++     KG + 
Sbjct: 294 SDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALV 353

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
             H   + D M+RNG+ PD   FN L+   ++    + A  +F++M   G++ ++ TY  
Sbjct: 354 EMHA--LLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++  +CK   +D A     +M  + ++PN++ Y+++I       + D A  +  EM   G
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I L+ + +N+++  + K GR  E+  +   M   G++ + +TY+ L+ GY   GK DE  
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEAT 531

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++   M +  + P+ +TY+TLI+ Y +     +A+ +F+E   +G+  +++ Y+ ++  L
Sbjct: 532 KLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
                  +A  L   +TK G +  + TYN I+    ++  T+
Sbjct: 592 FHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTD 633



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 186/359 (51%), Gaps = 3/359 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++  L + G+   A+ IF++    G    +  +  L+  Y   G   E  ++ + M R
Sbjct: 305 NSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVR 364

Query: 257 YNLKPNLVTYNAVIDACGKG-GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + P+   +N +I A  K   VD    + +F  M ++G+ P+ +T+ +++ +  + G  
Sbjct: 365 NGIHPDHHVFNILICAYAKQEKVD--EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSV 422

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A   F +M+  G+  +I  Y +L+ ++C   + D A E++ EM  + I  N + ++++
Sbjct: 423 DDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I  + K GR+ ++  +F  M  +G+  + ++Y+T++  Y   G+ +EA  +   M S G+
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D VTYN L+ GY +  + D+   +F++M +  VSPN++TY+ ++           A +
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++    ++G + ++  Y+ ++  LCKN L + A+ +   +    ++    T+N +I A 
Sbjct: 603 LYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 661



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 199/467 (42%), Gaps = 75/467 (16%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+++FE  L  G G ++Y  +  ++   R      A+S +N M R               
Sbjct: 34  ARHVFEELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMAR--------------- 77

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
             G G V                  P   T+  L+  C R G  +        +V +G  
Sbjct: 78  -AGAGKV-----------------TPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFR 119

Query: 332 QDIFTYNTLLDAICKGAQ----MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            +  T+  LL  +C   +    MD+    M E+      P+V + + ++ G     R  +
Sbjct: 120 VEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCM---PDVFSCTILLKGLCDENRSQE 176

Query: 388 AL---NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           AL   +M ++ +  G   D VSY TV++ + K G  ++A     EM    I  D VTY++
Sbjct: 177 ALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSS 236

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++    K    D+   +   M  + V PN +TY++++  Y      KEA+   ++ +  G
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           ++ DVV Y++L+D LCKNG    A  + D MTK G+ P++ TY +++  +   AT    V
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY---ATKGALV 353

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
           +            A LD M       V+     D+    VF  L+   A Q K +     
Sbjct: 354 E----------MHALLDLM-------VRNGIHPDHH---VFNILICAYAKQEKVDEA--- 390

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                + VF KM +  + PNVVT+ A++    +  S +DA +  E++
Sbjct: 391 -----MLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 182/362 (50%), Gaps = 10/362 (2%)

Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
             F+  R+   N       A+I IL + G VD A   FE  ++EG    +  +++LI + 
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRNGV 295
                  +A  +   M    +  N + +N++I +  K G     V+E   +FD M+R GV
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEG----RVIESEKLFDLMVRIGV 507

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +P+ IT+++L+      G  + A  L + M   G+  D  TYNTL++  C+ ++MD A  
Sbjct: 508 KPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALA 567

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           +  EM +  +SPN++TY+ ++ G     R   A  ++  +   G  L+  +YN +L    
Sbjct: 568 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLC 627

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K    +EAL + + +  + ++ +  T+N ++G   K G+ DE + +F  + A+ + P++ 
Sbjct: 628 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 687

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA---VSLL 532
           TYS + +   + GL +E   +F   ++ G  A+  + ++++  L + G +  A   +S++
Sbjct: 688 TYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMI 747

Query: 533 DE 534
           DE
Sbjct: 748 DE 749


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 186/366 (50%), Gaps = 1/366 (0%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I +LG+  + D A +I     + G    V   + +I     +G   +A +VF  MK  + 
Sbjct: 248 IRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQ 307

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           KP+ VTY  ++D CG  G D + VVE+++ M+ +G   + +++ +++    + G  + A 
Sbjct: 308 KPDRVTYITLLDKCGDSG-DSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEAL 366

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            +F+EM  +G+  + ++YN+L+    K    D A E+   M A   SPN  T+   I+ Y
Sbjct: 367 AVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYY 426

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K+G+   A+  +  MK  GI  D  + N VL   A  GR   A  V  E+++ G+  D 
Sbjct: 427 GKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDT 486

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           +TY  ++    K  K DE    F  M      P++L  ++LID   KGG   EA Q+F +
Sbjct: 487 ITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHK 546

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
            K+  ++     Y+ L+  L + G V+  + LL+EMT+    PN++TYN+++D   ++  
Sbjct: 547 LKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGE 606

Query: 560 TECTVD 565
             C +D
Sbjct: 607 VNCAID 612



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 203/413 (49%), Gaps = 20/413 (4%)

Query: 157 DDYTFLLRELGNRG------EWSKAIQCFAFAVKREERKNDQGKLA-----------SAM 199
           D   +LL E+  RG       ++  I+    A + +E  +  GK+            + +
Sbjct: 223 DTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVI 282

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I +L   G++  AK +F              +  L+   G SG  Q  + V+N+M     
Sbjct: 283 IQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGY 342

Query: 260 KPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             N+V+Y AV+DA C  G VD    + +FD+M   G+ P++ ++NSL++   +  +++ A
Sbjct: 343 NDNIVSYTAVVDALCQVGRVD--EALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRA 400

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             LFN M   G   + +T+   ++   K  Q   A +    M +K I P+V   + ++  
Sbjct: 401 LELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYS 460

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
            A +GRL  A  +F E+K +G+  D ++Y  ++   +K  + +EA+    +M  SG   D
Sbjct: 461 LAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPD 520

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            +  N+L+    K GK +E  ++F ++K   + P   TY+TL+    + G  KE MQ+  
Sbjct: 521 VLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLE 580

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           E  +     +++ Y+ ++D L KNG V  A+ +L  MT++G  P++ +YN+++
Sbjct: 581 EMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVM 633



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 208/415 (50%), Gaps = 12/415 (2%)

Query: 145 ILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           IL K E   C  D   +T +++ L + G  S A   F + +K  ++K D+       I++
Sbjct: 263 ILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVF-WKMKASDQKPDR----VTYITL 317

Query: 203 LGRLGKVDLAKNIFET---ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           L + G    ++++ E     + +GY + + +++A++ A  + G   EA++VF+ MK   +
Sbjct: 318 LDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGM 377

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            P   +YN++I    K  + F   +E+F+ M   G  P+  T    +    + G    A 
Sbjct: 378 SPEQYSYNSLISGFLKADM-FDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAI 436

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
             +  M  +GI  D+   N +L ++    ++ +A  +  E+ A  +SP+ +TY+ MI   
Sbjct: 437 QRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCC 496

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
           +KA + D+A+N FS+M   G   D ++ N+++    K G+  EA  +  +++   I    
Sbjct: 497 SKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTN 556

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
            TYN LL G G++GK  EV ++ E+M      PNL+TY+T++D  SK G    A+ +   
Sbjct: 557 GTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYS 616

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             + G   D+  Y+ ++  L K   +E A  +  +M K+ + P+  T  +I+ +F
Sbjct: 617 MTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM-KKILAPDYATLCTILPSF 670



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 145/622 (23%), Positives = 269/622 (43%), Gaps = 63/622 (10%)

Query: 57  PSPRNAPKPA-----ATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFG 111
           P+P    +P      +T   VAP PK         +   + AP    R   R V     G
Sbjct: 17  PAPSRTSRPVKMGAPSTGLLVAP-PKRRRGGR---AGCRQSAPPVPPRDERRVV-----G 67

Query: 112 RPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGE 171
              +    R +    EAL   TA AR              K+   +   ++L  +   G 
Sbjct: 68  TDSVVHMLRSAPDPAEALELFTAAARQPT-----------KVHTTESCNYMLELMRAHGR 116

Query: 172 WSKAIQCFAFAVKREERKNDQGKLASAM--ISILGRLGKVDLAKNIFETALNEGYGNTVY 229
                Q F   ++++  K + G  A+    + + G L    +A  +   A   G     Y
Sbjct: 117 VGDMAQVFDL-MQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREA---GMSLNAY 172

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            ++ LI    +SG+  EA+ V+ +M    + P++ TY+ ++ A GK   D   V+ + ++
Sbjct: 173 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKR-DVDTVLWLLNE 231

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   GV+P+  ++   + V  +   ++ A ++  +M   G   D+ T+  ++  +C   +
Sbjct: 232 MEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGR 291

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  A  +  +M A +  P+ VTY T++D    +G     + +++ M   G   + VSY  
Sbjct: 292 LSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTA 351

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           V+    ++GR +EAL V  EM+  G+  +  +YN+L+ G+ K   +D    +F  M A  
Sbjct: 352 VVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACG 411

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            SPN  T+   I+ Y K G   +A+Q +   K  G+  DV   +A++ +L  +G +  A 
Sbjct: 412 PSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAK 471

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            +  E+   G+ P+ +TY  +I    +++              K  E+ N  +       
Sbjct: 472 RVFYELKAMGVSPDTITYTMMIKCCSKAS--------------KADEAMNFFS------- 510

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
           D+ E+G   +  +     L+ +   +G K N   Q       +F K+ ++KI+P   T++
Sbjct: 511 DMVESGCVPD--VLALNSLI-DTLYKGGKGNEAWQ-------LFHKLKEMKIEPTNGTYN 560

Query: 650 AILNACSRCNSFEDASMLLEEL 671
            +L+   R    ++   LLEE+
Sbjct: 561 TLLSGLGREGKVKEVMQLLEEM 582



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 144/267 (53%)

Query: 285  EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
            ++F+     GV     ++NSL+       L + A +LF EM   G   D FTYN +LDA+
Sbjct: 752  QLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAM 811

Query: 345  CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
             K  +++   ++  EM  K      VTY+T+I G  K+ RL+ A++++  +   G     
Sbjct: 812  GKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTP 871

Query: 405  VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
             +Y  +L    K G+  +A  +  EM   G   +   YN LL G+   G  + V ++FE+
Sbjct: 872  CTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEK 931

Query: 465  MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
            M    ++P++ +Y+ LID     G   + +  FR+  + GL+ D+++Y+ LID L K+  
Sbjct: 932  MVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSER 991

Query: 525  VESAVSLLDEMTKEGIRPNVVTYNSII 551
            +E AVSL +EM K+GI PN+ TYNS+I
Sbjct: 992  IEEAVSLFNEMKKKGIIPNLYTYNSLI 1018



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/529 (22%), Positives = 235/529 (44%), Gaps = 68/529 (12%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            + MI    +  K D A N F   +  G    V A ++LI    + G   EA  +F+ +K 
Sbjct: 490  TMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKE 549

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              ++P   TYN ++   G+ G   K V+++ ++M R    P+ IT+N++L   S+ G   
Sbjct: 550  MKIEPTNGTYNTLLSGLGREG-KVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVN 608

Query: 317  AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
             A ++   M  +G   D+ +YNT++  + K  +++ AF +  +M  K ++P+  T  T++
Sbjct: 609  CAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM-KKILAPDYATLCTIL 667

Query: 377  DGYAKAGRLDDALNMFSEMKF-LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
              + K G + +AL+   E     G  +D+ S+++++    K    E+++   + + S GI
Sbjct: 668  PSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGI 727

Query: 436  ----------------RKDAV-------------------TYNALLGGYGKQGKYDEVRR 460
                             K A+                   +YN+L+ G   +   D    
Sbjct: 728  LLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAED 787

Query: 461  MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
            +F +MK     P+  TY+ ++D   K    +E +++ +E  + G ++  V Y+ +I  L 
Sbjct: 788  LFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLV 847

Query: 521  KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT-----------------ECT 563
            K+  +E A+ L   +  EG  P   TY  ++D   +S                     CT
Sbjct: 848  KSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCT 907

Query: 564  VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
            + ++   L   + + N + +C   +K V++    D   IK +  L+      G+  +   
Sbjct: 908  IYNIL--LNGHRIAGNTENVCQLFEKMVEQGINPD---IKSYTILIDTLCTAGRLNDG-- 960

Query: 624  QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
               LC    F+++H+L ++P+++ ++ +++   +    E+A  L  E++
Sbjct: 961  ---LC---YFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMK 1003



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 155/318 (48%), Gaps = 1/318 (0%)

Query: 230  AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            ++++LI           A  +F  MKR    P+  TYN ++DA GK  +  + ++++  +
Sbjct: 768  SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKS-MRVEEMLKVQKE 826

Query: 290  MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
            M R G +   +T+N++++   +    E A +L+  ++  G      TY  LLD + K  +
Sbjct: 827  MHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGK 886

Query: 350  MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            M  A  +  EM      PN   Y+ +++G+  AG  ++   +F +M   GI  D  SY  
Sbjct: 887  MVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTI 946

Query: 410  VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
            ++      GR  + L   +++   G+  D + YN L+ G GK  + +E   +F +MK   
Sbjct: 947  LIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKG 1006

Query: 470  VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            + PNL TY++LI    K G   EA Q++ E  + G K  V  Y+ALI     +G  ++A 
Sbjct: 1007 IIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAY 1066

Query: 530  SLLDEMTKEGIRPNVVTY 547
            +   +M   G +PN  TY
Sbjct: 1067 AAYGQMIVGGCQPNSSTY 1084



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 117/494 (23%), Positives = 223/494 (45%), Gaps = 34/494 (6%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
            Y  LL  LG  G+  + +Q      +     N      + ++  L + G+V+ A ++  +
Sbjct: 559  YNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLI--TYNTVLDCLSKNGEVNCAIDMLYS 616

Query: 219  ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               +G    + +++ ++    +    +EA  +F  MK+  L P+  T   ++ +  K G+
Sbjct: 617  MTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGL 675

Query: 279  DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
              + +  + + +L+ G   D+ +F+SL+    +    E +      +  RGI  + F   
Sbjct: 676  MKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLC 735

Query: 339  TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
             L+  +CK  +   A ++  +     +S    +Y+++I G      +D A ++F+EMK L
Sbjct: 736  PLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRL 795

Query: 399  GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            G G D  +YN +L    K  R EE L V KEM   G     VTYN ++ G  K  + ++ 
Sbjct: 796  GCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQA 855

Query: 459  RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
              ++  + ++  SP   TY  L+D   K G   +A  +F E  + G + +  +Y+ L++ 
Sbjct: 856  IDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNG 915

Query: 519  LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
                G  E+   L ++M ++GI P++ +Y  +ID       T CT   +           
Sbjct: 916  HRIAGNTENVCQLFEKMVEQGINPDIKSYTILID-------TLCTAGRLN---------- 958

Query: 579  NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
              D +C    + + E G   + I  V+  L+    G GK E R  + +     +F +M K
Sbjct: 959  --DGLCYF--RQLHELGLEPDLI--VYNLLI---DGLGKSE-RIEEAV----SLFNEMKK 1004

Query: 639  LKIKPNVVTFSAIL 652
              I PN+ T+++++
Sbjct: 1005 KGIIPNLYTYNSLI 1018



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 152/311 (48%), Gaps = 1/311 (0%)

Query: 209  VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
            +D+A+++F      G G   + ++ ++ A G+S   +E + V   M R   +   VTYN 
Sbjct: 782  IDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNT 841

Query: 269  VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
            +I    K     +  ++++ +++  G  P   T+  LL    + G    A NLFNEM+  
Sbjct: 842  IISGLVKSK-RLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEY 900

Query: 329  GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            G + +   YN LL+        +   ++  +M  + I+P++ +Y+ +ID    AGRL+D 
Sbjct: 901  GCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDG 960

Query: 389  LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            L  F ++  LG+  D + YN ++    K  R EEA+ +  EM+  GI  +  TYN+L+  
Sbjct: 961  LCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILH 1020

Query: 449  YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             GK GK  E  +M+E++      P++ TY+ LI  YS  G    A   + +    G + +
Sbjct: 1021 LGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPN 1080

Query: 509  VVLYSALIDAL 519
               Y  L + L
Sbjct: 1081 SSTYMQLPNQL 1091



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 137/333 (41%), Gaps = 67/333 (20%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           S N +L +    GR  +   V   M+   ++ +  T+  + GG G +G           M
Sbjct: 103 SCNYMLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVM 162

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           +   +S N  TY+ LI    K G   EAM++++   + G+   V  YS L+ A  K   V
Sbjct: 163 REAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDV 222

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           ++ + LL+EM   G++PNV +Y   I   G++A      D+    LGK ++S      C 
Sbjct: 223 DTVLWLLNEMEARGVKPNVYSYTICIRVLGQAAR----FDEAYHILGKMEDSG-----CK 273

Query: 586 QDDKDVQEAGRTDNQIIKVF---GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
            D         T   II+V    G+L   KA                  VF KM     K
Sbjct: 274 PDV-------VTHTVIIQVLCDAGRLSDAKA------------------VFWKMKASDQK 308

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GYRDNIWV------ 695
           P+ VT+  +L+   +C    D+  ++E           V + ++  GY DNI        
Sbjct: 309 PDRVTYITLLD---KCGDSGDSQSVVE-----------VWNAMVADGYNDNIVSYTAVVD 354

Query: 696 ---------QALSLFDEVKLMDSSTASAFYNAL 719
                    +AL++FDE+K    S     YN+L
Sbjct: 355 ALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSL 387


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 195/417 (46%), Gaps = 44/417 (10%)

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           PN+ T+N VID   K G +      +F  M   G  PD +TFNSL+    + G  +    
Sbjct: 186 PNVFTFNIVIDFLCKEG-ELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L  EM   G   D+ TYN L++  CK  +M+ A+   A M  + +  NVVT+ST +D + 
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K G + +A+ +F++M+  G+ L+  +Y  ++    K GR ++A+++  EM   G+  + V
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY  L+ G  K+ K  E   +   M+   V  N L Y+TLI  +      ++A+ +  E 
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           K  GL+ D+ LY ALI  LC    ++ A SLL +M + G+ PN + Y +++DA  +S   
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 561 ECTVDDVER--DLGKQKE----SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
              +  +++  D G Q       A +D +C        +AG  D  I             
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLC--------KAGSIDEAISH----------- 525

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                             F KM  L + PNV  ++A+++   +     +A  L  E+
Sbjct: 526 ------------------FNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEM 564



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 216/432 (50%), Gaps = 17/432 (3%)

Query: 130 HHVTAFARDDVSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREE 187
           H +   ARD    G ++++   +L   + +TF  ++  L   GE ++A   F+       
Sbjct: 162 HILLRLARDRS--GRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFS------- 212

Query: 188 RKNDQGKLA-----SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSG 242
           R  + G L      +++I   G+ G++D  + + E     G    V  ++ALI+ + + G
Sbjct: 213 RMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFG 272

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
             + A   F +MKR  +  N+VT++  +DA  K G+  +  +++F  M   G+  +  T+
Sbjct: 273 RMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL-VREAMKLFAQMRVRGMALNEFTY 331

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
             L+    + G  + A  L +EMV +G+  ++ TY  L+D +CK  ++  A +++  M  
Sbjct: 332 TCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEK 391

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
             +  N + Y+T+I G+      + AL + SEMK  G+ LD   Y  ++     + + +E
Sbjct: 392 AGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDE 451

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A  +  +M+ SG+  + + Y  ++    K GK  E   M +++      PN++TY  LID
Sbjct: 452 AKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALID 511

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
              K G   EA+  F + +  GL  +V  Y+AL+D LCKNG +  AV L +EM  +G+  
Sbjct: 512 GLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSL 571

Query: 543 NVVTYNSIIDAF 554
           + V Y +++D +
Sbjct: 572 DKVVYTALLDGY 583



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 187/382 (48%), Gaps = 26/382 (6%)

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           ++LL+V +  GL + A      +    +  +  T N +L  + +     L   +  ++PA
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA 185

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
               PNV T++ +ID   K G L +A ++FS MK +G   D V++N+++  Y K G  +E
Sbjct: 186 ----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
              + +EM  SG + D VTYNAL+  + K G+ +     F  MK + V  N++T+ST +D
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            + K GL +EAM++F + +  G+  +   Y+ LID  CK G ++ A+ LLDEM ++G+  
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL---------DAMCSQDDKDVQE 593
           NVVTY  ++D   +        +DV R + K    AN            M    +K +  
Sbjct: 362 NVVTYTVLVDGLCKERKVA-EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGL 420

Query: 594 AGRTDNQ----IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
                N+     I ++G L+       K +            +  KM +  ++PN + ++
Sbjct: 421 LSEMKNKGLELDISLYGALIQGLCNVHKLDE--------AKSLLTKMDESGLEPNYIIYT 472

Query: 650 AILNACSRCNSFEDASMLLEEL 671
            +++AC +     +A  +L+++
Sbjct: 473 TMMDACFKSGKVPEAIAMLQKI 494



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 202/451 (44%), Gaps = 53/451 (11%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-----SAMISILGRL 206
           C AD  T+  L+      G    A   FA A+KRE      G +A     S  +    + 
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFA-AMKRE------GVMANVVTFSTFVDAFCKE 306

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G V  A  +F      G     + ++ LI    ++G   +AI + + M R  +  N+VTY
Sbjct: 307 GLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTY 366

Query: 267 NAVIDA-CG---------------KGGV------------------DFKHVVEIFDDMLR 292
             ++D  C                K GV                  + +  + +  +M  
Sbjct: 367 TVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKN 426

Query: 293 NGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
            G++ D   + +L+  +C+   L EA ++L  +M   G++ +   Y T++DA  K  ++ 
Sbjct: 427 KGLELDISLYGALIQGLCNVHKLDEA-KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A  ++ ++      PNV+TY  +IDG  KAG +D+A++ F++M+ LG+  +  +Y  ++
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
               K G   EA+ +  EM   G+  D V Y ALL GY KQG   +   +  +M    + 
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
            +L  Y+  I  +    +  EA ++F E    G+  D  +Y+ LI    K G +E A+SL
Sbjct: 606 LDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
            DEM  E + P+    ++  DA G   TT+C
Sbjct: 666 QDEM--ERVLPSCTDSDTATDA-GSVCTTKC 693


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 196/413 (47%), Gaps = 36/413 (8%)

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           PN+ T+N VID   K G +      +F  M   G  PD +TFNSL+    + G  +    
Sbjct: 186 PNVFTFNIVIDFLCKEG-ELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L  EM   G   D+ TYN L++  CK  +M+ A+   A M  + +  NVVT+ST +D + 
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K G + +A+ +F++M+  G+ L+  +Y  ++    K GR ++A+++  EM   G+  + V
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY  L+ G  K+ K  E   +   M+   V  N L Y+TLI  +      ++A+ +  E 
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           K  GL+ D+ LY ALI  LC    ++ A SLL +M + G+ PN + Y +++DA  +S   
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 561 ECTVDDVER--DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
              +  +++  D G Q    N+   C+  D  + +AG  D  I                 
Sbjct: 485 PEAIAMLQKILDSGFQP---NVITYCALID-GLCKAGSIDEAISH--------------- 525

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                         F KM  L + PNV  ++A+++   +     +A  L  E+
Sbjct: 526 --------------FNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEM 564



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 216/432 (50%), Gaps = 17/432 (3%)

Query: 130 HHVTAFARDDVSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREE 187
           H +   ARD    G ++++   +L   + +TF  ++  L   GE ++A   F+       
Sbjct: 162 HILLRLARDRS--GRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFS------- 212

Query: 188 RKNDQGKLA-----SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSG 242
           R  + G L      +++I   G+ G++D  + + E     G    V  ++ALI+ + + G
Sbjct: 213 RMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFG 272

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
             + A   F +MKR  +  N+VT++  +DA  K G+  +  +++F  M   G+  +  T+
Sbjct: 273 RMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL-VREAMKLFAQMRVRGMALNEFTY 331

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
             L+    + G  + A  L +EMV +G+  ++ TY  L+D +CK  ++  A +++  M  
Sbjct: 332 TCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEK 391

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
             +  N + Y+T+I G+      + AL + SEMK  G+ LD   Y  ++     + + +E
Sbjct: 392 AGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDE 451

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A  +  +M+ SG+  + + Y  ++    K GK  E   M +++      PN++TY  LID
Sbjct: 452 AKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALID 511

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
              K G   EA+  F + +  GL  +V  Y+AL+D LCKNG +  AV L +EM  +G+  
Sbjct: 512 GLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSL 571

Query: 543 NVVTYNSIIDAF 554
           + V Y +++D +
Sbjct: 572 DKVVYTALLDGY 583



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 187/382 (48%), Gaps = 26/382 (6%)

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           ++LL+V +  GL + A      +    +  +  T N +L  + +     L   +  ++PA
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA 185

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
               PNV T++ +ID   K G L +A ++FS MK +G   D V++N+++  Y K G  +E
Sbjct: 186 ----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
              + +EM  SG + D VTYNAL+  + K G+ +     F  MK + V  N++T+ST +D
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            + K GL +EAM++F + +  G+  +   Y+ LID  CK G ++ A+ LLDEM ++G+  
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL---------DAMCSQDDKDVQE 593
           NVVTY  ++D   +        +DV R + K    AN            M    +K +  
Sbjct: 362 NVVTYTVLVDGLCKERKVA-EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGL 420

Query: 594 AGRTDNQ----IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
                N+     I ++G L+       K +            +  KM +  ++PN + ++
Sbjct: 421 LSEMKNKGLELDISLYGALIQGLCNVHKLDE--------AKSLLTKMDESGLEPNYIIYT 472

Query: 650 AILNACSRCNSFEDASMLLEEL 671
            +++AC +     +A  +L+++
Sbjct: 473 TMMDACFKSGKVPEAIAMLQKI 494



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 189/419 (45%), Gaps = 39/419 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+   + G+++ A   F     EG    V  FS  + A+ + G  +EA+ +F  M+ 
Sbjct: 262 NALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRV 321

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             +  N  TY  +ID   K G      + + D+M+R GV  + +T+  L+  +C    + 
Sbjct: 322 RGMALNEFTYTCLIDGTCKAG-RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVA 380

Query: 316 EA----------------------------------ARNLFNEMVHRGIDQDIFTYNTLL 341
           EA                                  A  L +EM ++G++ DI  Y  L+
Sbjct: 381 EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             +C   ++D A  ++ +M    + PN + Y+TM+D   K+G++ +A+ M  ++   G  
Sbjct: 441 QGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQ 500

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + ++Y  ++    K G  +EA+    +M   G+  +   Y AL+ G  K G  +E  ++
Sbjct: 501 PNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F +M    +S + + Y+ L+D Y K G   +A  +  +   +GL+ D+  Y+  I   C 
Sbjct: 561 FNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCN 620

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV---DDVERDLGKQKES 577
             ++  A  +  EM   GI P+   YN +I  + +    E  +   D++ER L    +S
Sbjct: 621 LNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTDS 679


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 141/531 (26%), Positives = 245/531 (46%), Gaps = 50/531 (9%)

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
           L +G    ++ ++ LI    + G   +A  + + M R  + P++ TYNA+ID   K G  
Sbjct: 280 LQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSG-R 338

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            K  + I   M  NG  PD  T+NSL+  +C  GG  + A  L N  + RG    + T+ 
Sbjct: 339 LKDALGIKTLMEGNGCNPDDWTYNSLIHGLC--GGKPDEAEELLNGAIARGFSPTVITFT 396

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            +++  CK  ++D A  + + M +     ++  Y  +I    K  RL +A +  +E+   
Sbjct: 397 NIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFAN 456

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  + V Y +++  Y K+G+   AL V K  E  G R +A TY++L+ G  +  K  + 
Sbjct: 457 GLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKA 516

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +  +M+ D ++P ++TY+TLI    K   +  A ++F   +Q GL  D   Y+ L DA
Sbjct: 517 MALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDA 576

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK----- 573
           LCK+G  E A S L    K+G+    VTY S++D F ++  TE     +E+ + +     
Sbjct: 577 LCKSGRAEEAYSFL---VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKAD 633

Query: 574 -QKESANLDAMCSQDDKDVQEAGRTDNQI--------IKVFGQLVAEKAGQGKKENRCRQ 624
               S  L A+C Q  K + EA    +Q+        I  +  +++E   +GK ++    
Sbjct: 634 SHTYSVLLQALCKQ--KKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHA--- 688

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR---------LFD 675
                  +F +M     KP+ +T++  +++  +    E+A  L+ E+           ++
Sbjct: 689 -----KSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYN 743

Query: 676 NQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHF 726
             + G  H   MGY D         F  +K M  ++    Y     +L HF
Sbjct: 744 VFINGCGH---MGYMD-------CAFSTLKRMIDASCEPNYWTYWLLLKHF 784



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 179/404 (44%), Gaps = 51/404 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I    ++GKV  A  +F+   +EG     + +S+LI    +     +A+++   M+ 
Sbjct: 466 TSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQE 525

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPD----------------- 298
             + P ++TY  +I   C K   +F +   +F+ M +NG+ PD                 
Sbjct: 526 DGITPGVITYTTLIQGQCKKH--EFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRA 583

Query: 299 ---------------RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
                          ++T+ SL+   S+ G  E A  L  +MV+ G   D  TY+ LL A
Sbjct: 584 EEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQA 643

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +CK  +++ A  I+ +M  + +  N+V Y+ +I    K G+ D A +MF+EM   G    
Sbjct: 644 LCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPS 703

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            ++Y   +S Y K+GR EEA  +  EME +G+  D VTYN  + G G  G  D      +
Sbjct: 704 AITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLK 763

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGL----------------YKEAMQIFREFKQAGLKA 507
           +M      PN  TY  L+  + K  L                     Q+     + GL  
Sbjct: 764 RMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNP 823

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             V YS++I   CK   +E A  LLD M  + I PN   Y  +I
Sbjct: 824 TAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLI 867



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 170/356 (47%), Gaps = 4/356 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +IS+L +  ++  AK+        G    V  ++++I AY + G    A+ VF   +   
Sbjct: 433 LISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEG 492

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            +PN  TY+++I    +        + +   M  +G+ P  IT+ +L+    +   ++ A
Sbjct: 493 CRPNAWTYSSLIYGLIQDQ-KLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNA 551

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             LF  M   G+  D   YN L DA+CK  + + A+  + +   K +    VTY++++DG
Sbjct: 552 FRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVK---KGVVLTKVTYTSLVDG 608

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           ++KAG  + A  +  +M   G   D  +Y+ +L    K  +  EAL +  +M   G++ +
Sbjct: 609 FSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGN 668

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            V Y  ++    K+GK+D  + MF +M +    P+ +TY+  I  Y K G  +EA  +  
Sbjct: 669 IVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIG 728

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           E ++ G+  DVV Y+  I+     G ++ A S L  M      PN  TY  ++  F
Sbjct: 729 EMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHF 784



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/358 (22%), Positives = 151/358 (42%), Gaps = 20/358 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++    + G  + A  + E  +NEG     + +S L+ A  +     EA+S+ + M  
Sbjct: 603 TSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTL 662

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +K N+V Y  +I    K G    H   +F++M+ +G +P  IT+   ++   + G  E
Sbjct: 663 RGVKGNIVAYTIIISEMIKEG-KHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIE 721

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +L  EM   G+  D+ TYN  ++       MD AF  +  M   +  PN  TY  ++
Sbjct: 722 EAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLL 781

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
                               FL + L    Y     ++  + + +    + + M   G+ 
Sbjct: 782 K------------------HFLKMSLANAHYVDTSGMWNWI-KLDTVWQLLERMVKHGLN 822

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             AVTY++++ G+ K  + +E   + + M    +SPN   Y+ LI       L+++A   
Sbjct: 823 PTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASF 882

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
                + G +  +  Y  LI  LC  G  + A +L  ++ +     N V +  + D  
Sbjct: 883 VTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGL 940



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 103/465 (22%), Positives = 190/465 (40%), Gaps = 65/465 (13%)

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRIT---FNSLLAVCSRGGLWEAARNLFNEMVHR 328
           +C     D +  V+    + R G +   ++   +N  L    R  + E    L++++V  
Sbjct: 118 SCSGTAEDMREAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQE 177

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G+  D  TYNT++ A CK   + +A      +    +  +  T + ++ GY + G L  A
Sbjct: 178 GLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKA 237

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             +   M  +G   +  SY  ++    +     EAL++   M   G   +  TY  L+ G
Sbjct: 238 CWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRG 297

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             K+G+  + R + ++M    V P++ TY+ +ID Y K G  K+A+ I    +  G   D
Sbjct: 298 LCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPD 357

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
              Y++LI  LC  G  + A  LL+     G  P V+T+ +II+ + ++      +DD  
Sbjct: 358 DWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAE----KIDDAL 412

Query: 569 RDLGKQKESANLDAMCSQD-------------DKDVQEAGRTDNQI--------IKVFGQ 607
           R      +S  + + C  D                ++EA  T N+I        + ++  
Sbjct: 413 R-----VKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTS 467

Query: 608 LVAEKAGQGK-----------KENRCR----------------QEILCILGVFQKMHKLK 640
           ++      GK           +   CR                Q++   + +  KM +  
Sbjct: 468 IIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDG 527

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGV 681
           I P V+T++ ++    + + F++A  L E +       D Q Y V
Sbjct: 528 ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNV 572



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 158/369 (42%), Gaps = 23/369 (6%)

Query: 181 FAVKREERKNDQGKLA-----SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALI 235
           FA    E+  ++G  A     S ++  L +  K++ A +I +     G    + A++ +I
Sbjct: 617 FAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIII 676

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV 295
           S   + G    A S+FN M     KP+ +TY   I +  K G   +    +  +M RNGV
Sbjct: 677 SEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIG-RIEEAGHLIGEMERNGV 735

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA------- 348
            PD +T+N  +  C   G  + A +    M+    + + +TY  LL    K +       
Sbjct: 736 APDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYV 795

Query: 349 ---------QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
                    ++D  ++++  M    ++P  VTYS++I G+ KA RL++A  +   M    
Sbjct: 796 DTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKD 855

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I  +   Y  ++     +  FE+A      M   G +    +Y+ L+ G   +G YD+ +
Sbjct: 856 ISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAK 915

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +F  +     + N + +  L D   K G      Q+    +    + D   YS + + +
Sbjct: 916 ALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTNNI 975

Query: 520 CK-NGLVES 527
            + +G+ ES
Sbjct: 976 HEASGMYES 984


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 201/397 (50%), Gaps = 3/397 (0%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           DY  +LR   +  E   AI    F V  + R        S ++S + ++ K DL  +  E
Sbjct: 45  DYREVLRTGLSDIELDDAIG--LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGE 102

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                G  + +Y ++ LI+ + R      A+++   M +   +P++VT N++++    G 
Sbjct: 103 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGN 162

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
                 V + D M+  G +PD +TF +L+           A  L + MV RG   D+ TY
Sbjct: 163 -RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             +++ +CK    DLA  ++ +M A  I  NVV YST+ID   K    DDALN+F+EM+ 
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  + ++Y++++S     GR+ +A  +  +M    I  + VT++AL+  + K+GK  +
Sbjct: 282 KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK 341

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             +++E+M    + PN+ TYS+LI+ +       EA Q+     +     +VV Y+ LI+
Sbjct: 342 AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 401

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             CK   V+  + L  EM++ G+  N VTY ++I  F
Sbjct: 402 GFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 181/343 (52%), Gaps = 15/343 (4%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           GY   +   ++L++ +       +A+++ + M     KP+ VT+  +I         F H
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGL------FLH 196

Query: 283 -----VVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
                 V + D M++ G QPD +T+ +++  +C RG   + A NL N+M    I+ ++  
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD-TDLALNLLNKMEAAKIEANVVI 255

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y+T++D++CK    D A  +  EM  K + PNV+TYS++I      GR  DA  + S+M 
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
              I  + V+++ ++  + K G+  +A  + +EM    I  +  TY++L+ G+    +  
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375

Query: 457 EVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           E ++M E M + DC+ PN++TY+TLI+ + K     + M++FRE  Q GL  + V Y+ L
Sbjct: 376 EAKQMLELMIRKDCL-PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           I    +    ++A  +  +M   G+ PN++TYN ++D   ++ 
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 168/297 (56%), Gaps = 7/297 (2%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH---VVEI 286
            + A+++   + G    A+++ N M+   ++ N+V Y+ VID+  K    ++H    + +
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK----YRHEDDALNL 275

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F +M   GV+P+ IT++SL++     G W  A  L ++M+ R I+ ++ T++ L+DA  K
Sbjct: 276 FTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVK 335

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A ++  EM  ++I PN+ TYS++I+G+    RL +A  M   M       + V+
Sbjct: 336 KGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT 395

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNT+++ + K  R ++ + + +EM   G+  + VTY  L+ G+ +    D  + +F+QM 
Sbjct: 396 YNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 455

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +  V PN+LTY+ L+D   K G   +AM +F   +++ ++ D+  Y+ +I+ +CK G
Sbjct: 456 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 163/295 (55%), Gaps = 3/295 (1%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+++ L + G  DLA N+            V  +S +I +  +  +  +A+++F  M+  
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            ++PN++TY+++I   C  G   +     +  DM+   + P+ +TF++L+    + G   
Sbjct: 283 GVRPNVITYSSLISCLCNYG--RWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L+ EM+ R ID +IFTY++L++  C   ++  A +++  M  K+  PNVVTY+T+I
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G+ KA R+D  + +F EM   G+  + V+Y T++  + +    + A +V K+M S G+ 
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            + +TYN LL G  K GK  +   +FE ++   + P++ TY+ +I+   K G +K
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 219/478 (45%), Gaps = 40/478 (8%)

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G   ++    + +F  M ++   P  I F+ LL+  ++   ++   +   +M   GI  +
Sbjct: 53  GLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHN 112

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++TYN L++  C+ +++ LA  ++ +M      P++VT +++++G+    R+ DA+ +  
Sbjct: 113 LYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVD 172

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           +M  +G   D V++ T++       +  EA+ +   M   G + D VTY A++ G  K+G
Sbjct: 173 QMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG 232

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
             D    +  +M+A  +  N++ YST+ID   K     +A+ +F E +  G++ +V+ YS
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           +LI  LC  G    A  LL +M +  I PN+VT++++IDAF +        + +  ++ K
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL-VKAEKLYEEMIK 351

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
           +    N+                T + +I  F  L  ++ G+ K+             + 
Sbjct: 352 RSIDPNI---------------FTYSSLINGFCML--DRLGEAKQ-------------ML 381

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQV--YGVAHGLLMG 688
           + M +    PNVVT++ ++N   +    +    L  E+    L  N V    + HG    
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441

Query: 689 YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWE 746
            RD     A  +F ++  +        YN L D L   G K    +VV E  +R   E
Sbjct: 442 -RD--CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG-KLAKAMVVFEYLQRSTME 495



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 151/337 (44%), Gaps = 31/337 (9%)

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
           + Y  +L       ++D A  +   M      P+++ +S ++   AK  + D  ++   +
Sbjct: 44  YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M+ LGI  +  +YN +++ + +  R   AL +  +M   G   D VT N+LL G+    +
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
             +   + +QM      P+ +T++TLI          EA+ +     Q G + D+V Y A
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           +++ LCK G  + A++LL++M    I  NVV Y+++ID+  +                 +
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY----------------R 267

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
            E   L+     ++K V+         +  +  L++     G+  +  R        +  
Sbjct: 268 HEDDALNLFTEMENKGVRPN-------VITYSSLISCLCNYGRWSDASR--------LLS 312

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            M + KI PN+VTFSA+++A  +      A  L EE+
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 197/408 (48%), Gaps = 12/408 (2%)

Query: 157 DDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMI--SILGRLGKVDLAKN 214
           D Y  L+    + G+W + +Q         E+ + +G         S+L  L  +    +
Sbjct: 243 DTYNCLIHGYLSIGKWKEVVQML-------EKMSARGLKPDCYTYGSLLNYLCALSEMHS 295

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-C 273
             +  +  G     + F+   SAY + G   +A+ +FN M+++ L PN+V Y A+IDA C
Sbjct: 296 FLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALC 355

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
             G VD   V   F+ M+  GV P+ + FNSL+        WE A  L  EM+ +GI  +
Sbjct: 356 KLGRVDDAEVK--FNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPN 413

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
              +NTL+  +C   ++     ++  M    + P+  +Y+ +I GY  AGR D+A  +F 
Sbjct: 414 AVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFD 473

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M  +G+    V+YNT+L  Y    R ++A  + +EM   G+    VTYN +L G  +  
Sbjct: 474 GMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTK 533

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           ++ E + ++  M       ++ TY+ +++   K     EA ++F+     GL+ +++ ++
Sbjct: 534 RFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFT 593

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +I AL K G  E A+ L   +   G+ PNVVTY  + +      + E
Sbjct: 594 IMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLE 641



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 167/330 (50%), Gaps = 18/330 (5%)

Query: 247 AISVFNSMKR---YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
            +S+FN M R     + PN  TY+ +I    + G   KH    F  +L+ G + + I  N
Sbjct: 79  VVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMG-RLKHSFATFGLILKTGWRVNDIVIN 137

Query: 304 SLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI---MAE 359
            LL  +C    + EA   L   M   G   D  +Y+ LL   C   + + A E+   MA 
Sbjct: 138 QLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAN 197

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
              ++  PNVVTY+T+IDG  KA   D A  +F +M   G+  +  +YN ++  Y  +G+
Sbjct: 198 DHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGK 257

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
           ++E + + ++M + G++ D  TY +LL          E+    + M  + +SP+   ++ 
Sbjct: 258 WKEVVQMLEKMSARGLKPDCYTYGSLL---NYLCALSEMHSFLDLMVENGLSPDHHIFNI 314

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
               Y+K G+  +AM IF + +Q GL  +VV Y ALIDALCK G V+ A    ++M  EG
Sbjct: 315 FFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG 374

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           + PN+V +NS++          CTVD  ER
Sbjct: 375 VTPNIVVFNSLVYGL-------CTVDKWER 397



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 200/450 (44%), Gaps = 54/450 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-------SAMISILGRLGKVDL 211
           Y+ LL+   N     +A++            ND G+         + +I  L +    D 
Sbjct: 172 YSILLKGFCNENRAEEALELLRMMA------NDHGRSCPPNVVTYTTVIDGLCKAQLFDR 225

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+ +F+  ++ G       ++ LI  Y   G  +E + +   M    LKP+  TY ++++
Sbjct: 226 AEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLN 285

Query: 272 -ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
             C         +    D M+ NG+ PD   FN   +  ++ G+ + A ++FN+M   G+
Sbjct: 286 YLCA-----LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGL 340

Query: 331 DQDIFTYNTLLDAICKGAQMD-----------------------------------LAFE 355
             ++  Y  L+DA+CK  ++D                                    A E
Sbjct: 341 SPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEE 400

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++ EM  + I PN V ++T+I      GR+ +   +   M+ +G+  D  SY  ++S Y 
Sbjct: 401 LVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYC 460

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
             GR +EA  V   M S G+    VTYN LL GY    + D+   +F +M    V+P ++
Sbjct: 461 LAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVV 520

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY+T++    +   + EA +++     +G K D+  Y+ +++ LCK+  V+ A  +   +
Sbjct: 521 TYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSL 580

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
             +G++ N++T+  +I A  +    E  +D
Sbjct: 581 CSKGLQLNIITFTIMIGALLKGGRKEDAMD 610



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 177/359 (49%), Gaps = 5/359 (1%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+I  L +LG+VD A+  F   +NEG    +  F++L+         + A  +   M   
Sbjct: 349 ALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQ 408

Query: 258 NLKPNLVTYNAVI-DACGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            + PN V +N +I + C  G V + + ++++ + +   GV+PD  ++  L++     G  
Sbjct: 409 GICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV---GVRPDAFSYTPLISGYCLAGRT 465

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  +F+ MV  G+     TYNTLL   C  +++D A+ +  EM  K ++P VVTY+T+
Sbjct: 466 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTI 525

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G  +  R  +A  ++  M   G   D  +YN +L+   K    +EA  + + + S G+
Sbjct: 526 LHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 585

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + +T+  ++G   K G+ ++   +F  + A+ + PN++TY  + +   + G  +E   
Sbjct: 586 QLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDS 645

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +F   ++ G   +  + +AL+  L   G +  A + L ++ +        T + +I  F
Sbjct: 646 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIF 704



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 147/301 (48%), Gaps = 8/301 (2%)

Query: 191 DQGKLASA-----MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           DQG   +A     +I  L  +G+V   + + +   + G     ++++ LIS Y  +G   
Sbjct: 407 DQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTD 466

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           EA  VF+ M    L P  VTYN ++   C    +D  +   +F +MLR GV P  +T+N+
Sbjct: 467 EAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYC--LFREMLRKGVTPGVVTYNT 524

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           +L    +   +  A+ L+  M++ G   DI+TYN +L+ +CK   +D AF++   + +K 
Sbjct: 525 ILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG 584

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           +  N++T++ MI    K GR +DA+++F+ +   G+  + V+Y  V     + G  EE  
Sbjct: 585 LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFD 644

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +   ME +G   ++   NAL+     +G          ++     S    T S LI ++
Sbjct: 645 SLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIF 704

Query: 485 S 485
           +
Sbjct: 705 T 705



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 101/451 (22%), Positives = 189/451 (41%), Gaps = 75/451 (16%)

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA--------------FEIMAEMPAK 363
           A  LF+E++       +  +N +L+A+ + ++                  F  M    + 
Sbjct: 33  ALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRMVRECSI 92

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
            ++PN  TYS +I    + GRL  +   F  +   G  ++ +  N +L       R  EA
Sbjct: 93  KVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEA 152

Query: 424 L-LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD---CVSPNLLTYST 479
           + ++ + M   G   D V+Y+ LL G+  + + +E   +   M  D      PN++TY+T
Sbjct: 153 MDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTT 212

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +ID   K  L+  A  +F++    G+K +   Y+ LI      G  +  V +L++M+  G
Sbjct: 213 VIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARG 272

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           ++P+  TY S+++         C + ++          + LD M       V+     D+
Sbjct: 273 LKPDCYTYGSLLNYL-------CALSEMH---------SFLDLM-------VENGLSPDH 309

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
            I  +F    A K G   K           + +F KM +  + PNVV + A+++A  +  
Sbjct: 310 HIFNIFFSAYA-KCGMIDKA----------MDIFNKMRQHGLSPNVVNYGALIDALCKLG 358

Query: 660 SFEDASMLLEEL---------RLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSS 710
             +DA +   ++          +F++ VYG+          + W +A  L  E+      
Sbjct: 359 RVDDAEVKFNQMINEGVTPNIVVFNSLVYGLC-------TVDKWERAEELVYEMLDQGIC 411

Query: 711 TASAFYNALTDMLWHFGQKRGAQLVVLEGKR 741
             + F+N L   L + G+       V+EG+R
Sbjct: 412 PNAVFFNTLICNLCNVGR-------VMEGRR 435


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 205/400 (51%), Gaps = 11/400 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT ++      G+  KA   +   + R  R +      S++I+ L +   +D A  +  T
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDR--RISPDVVTYSSIIAALCKGQAMDKAMEVLTT 256

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +  G       +++++  Y  S   +EAI     M+   ++P++VTYN+++D   K G 
Sbjct: 257 MVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 316

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
                 +IFD M + G++PD  T+ +LL    ++G L E    L + MV  GI  D   +
Sbjct: 317 S-TEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEM-HALLDLMVRNGIHPDHHVF 374

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L+ A  K  ++D A  + ++M    ++PNVVTY  +I    K+G +DDA+  F +M  
Sbjct: 375 NILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMID 434

Query: 398 LGIGLDRVSYNTV---LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
            G+  + + Y ++   L I+ K  + EE +L   EM   GI  + + +N+++  + K+G+
Sbjct: 435 EGLTPNIIVYTSLIHSLCIFDKWDKAEELIL---EMLDRGICLNTIFFNSIIHSHCKEGR 491

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
             E  ++F+ M    V PN++TYSTLID Y   G   EA ++       G+K D V Y+ 
Sbjct: 492 VIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNT 551

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           LI+  C+   ++ A++L  EM   G+ PN++TYN I+   
Sbjct: 552 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/536 (25%), Positives = 250/536 (46%), Gaps = 44/536 (8%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKRY 257
           +I    R G++DL        + +G+      F+ L+          +A+  V   M   
Sbjct: 93  LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 258 NLKPNLVTYNAVIDACGKGGVD---FKHVVEIFDDMLRN---GVQPDRITFNSLLAVCSR 311
           +  P++ +   ++    KG  D    +  +E+   M  +   G  PD +++ +++    +
Sbjct: 153 SCMPDVFSCTILL----KGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFK 208

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            G  + A + ++EM+ R I  D+ TY++++ A+CKG  MD A E++  M    + PN +T
Sbjct: 209 EGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMT 268

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y++++ GY  + +  +A+    +M+  G+  D V+YN+++    K GR  EA  +   M 
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMT 328

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G+  D  TY  LL GY  +G   E+  + + M  + + P+   ++ LI  Y+K     
Sbjct: 329 KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVD 388

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EAM +F + +Q GL  +VV Y A+I  LCK+G V+ A+   ++M  EG+ PN++ Y S+I
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
            +        C  D  ++      E   L+ +         + G   N I   F  ++  
Sbjct: 449 HSL-------CIFDKWDK-----AEELILEML---------DRGICLNTIF--FNSIIHS 485

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              +G+        ++    +F  M ++ +KPNV+T+S +++        ++A+ LL  +
Sbjct: 486 HCKEGR--------VIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537

Query: 672 RLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWH 725
                +   V +  L+ GY R +    AL+LF E+     S     YN +   L+H
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 593



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 172/320 (53%), Gaps = 3/320 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIF 287
           + F+ LI AY +     EA+ VF+ M+++ L PN+VTY AVI   C  G VD    +  F
Sbjct: 372 HVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVD--DAMLYF 429

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           + M+  G+ P+ I + SL+        W+ A  L  EM+ RGI  +   +N+++ + CK 
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKE 489

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            ++  + ++   M    + PNV+TYST+IDGY  AG++D+A  + S M  +G+  D V+Y
Sbjct: 490 GRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTY 549

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           NT+++ Y ++ R ++AL + KEM SSG+  + +TYN +L G     +    + ++  +  
Sbjct: 550 NTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITK 609

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
                 L TY+ ++    K  L  EA+++F+      L+ +   ++ +I AL K G  + 
Sbjct: 610 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 669

Query: 528 AVSLLDEMTKEGIRPNVVTY 547
           A  L    +  G+ PN  TY
Sbjct: 670 AKDLFVAFSSNGLVPNYWTY 689



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 178/342 (52%), Gaps = 3/342 (0%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD 279
           ++G    V  +++L+    ++G   EA  +F+SM +  L+P++ TY  ++     KG + 
Sbjct: 294 SDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALV 353

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
             H   + D M+RNG+ PD   FN L+   ++    + A  +F++M   G++ ++ TY  
Sbjct: 354 EMHA--LLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++  +CK   +D A     +M  + ++PN++ Y+++I       + D A  +  EM   G
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I L+ + +N+++  + K GR  E+  +   M   G++ + +TY+ L+ GY   GK DE  
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEAT 531

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++   M +  + P+ +TY+TLI+ Y +     +A+ +F+E   +G+  +++ Y+ ++  L
Sbjct: 532 KLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
                  +A  L   +TK G +  + TYN I+    ++  T+
Sbjct: 592 FHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTD 633



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 186/359 (51%), Gaps = 3/359 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++  L + G+   A+ IF++    G    +  +  L+  Y   G   E  ++ + M R
Sbjct: 305 NSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVR 364

Query: 257 YNLKPNLVTYNAVIDACGKG-GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + P+   +N +I A  K   VD    + +F  M ++G+ P+ +T+ +++ +  + G  
Sbjct: 365 NGIHPDHHVFNILICAYAKQEKVD--EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSV 422

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A   F +M+  G+  +I  Y +L+ ++C   + D A E++ EM  + I  N + ++++
Sbjct: 423 DDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I  + K GR+ ++  +F  M  +G+  + ++Y+T++  Y   G+ +EA  +   M S G+
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D VTYN L+ GY +  + D+   +F++M +  VSPN++TY+ ++           A +
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++    ++G + ++  Y+ ++  LCKN L + A+ +   +    ++    T+N +I A 
Sbjct: 603 LYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 661



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 117/467 (25%), Positives = 199/467 (42%), Gaps = 75/467 (16%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+++F+  L  G G ++Y  +  ++   R      A+S +N M R               
Sbjct: 34  ARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMAR--------------- 77

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
             G G V                  P   T+  L+  C R G  +        +V +G  
Sbjct: 78  -AGAGKV-----------------TPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFR 119

Query: 332 QDIFTYNTLLDAICKGAQ----MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            +  T+  LL  +C   +    MD+    M E+      P+V + + ++ G     R  +
Sbjct: 120 VEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCM---PDVFSCTILLKGLCDENRSQE 176

Query: 388 AL---NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           AL   +M ++ +  G   D VSY TV++ + K G  ++A     EM    I  D VTY++
Sbjct: 177 ALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSS 236

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++    K    D+   +   M  + V PN +TY++++  Y      KEA+   ++ +  G
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           ++ DVV Y++L+D LCKNG    A  + D MTK G+ P++ TY +++  +   AT    V
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY---ATKGALV 353

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
           +            A LD M       V+     D+    VF  L+   A Q K +     
Sbjct: 354 E----------MHALLDLM-------VRNGIHPDHH---VFNILICAYAKQEKVDEA--- 390

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                + VF KM +  + PNVVT+ A++    +  S +DA +  E++
Sbjct: 391 -----MLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 176/362 (48%), Gaps = 10/362 (2%)

Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
             F+  R+   N       A+I IL + G VD A   FE  ++EG    +  +++LI + 
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRNGV 295
                  +A  +   M    +  N + +N++I +  K G     V+E   +FD M+R GV
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEG----RVIESEKLFDLMVRIGV 507

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +P+ IT+++L+      G  + A  L + M   G+  D  TYNTL++  C+ ++MD A  
Sbjct: 508 KPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALA 567

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           +  EM +  +SPN++TY+ ++ G     R   A  ++  +   G  L+  +YN +L    
Sbjct: 568 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLC 627

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K    +EAL + + +  + ++ +  T+N ++G   K G+ DE + +F    ++ + PN  
Sbjct: 628 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYW 687

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA---VSLL 532
           TY  + +     GL +E  Q+F   +  G   D  + + ++  L + G +  A   +S++
Sbjct: 688 TYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747

Query: 533 DE 534
           DE
Sbjct: 748 DE 749



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 148/342 (43%), Gaps = 6/342 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L    +W KA +     + R    N      +++I    + G+V  ++ +F+ 
Sbjct: 444 YTSLIHSLCIFDKWDKAEELILEMLDRGICLNTI--FFNSIIHSHCKEGRVIESEKLFDL 501

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +  G    V  +S LI  Y  +G   EA  + +SM    +KP+ VTYN +I+  C    
Sbjct: 502 MVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSR 561

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D    + +F +M+ +GV P+ IT+N +L          AA+ L+  +   G   ++ TY
Sbjct: 562 MD--DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTY 619

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N +L  +CK    D A  +   +   ++     T++ MI    K GR D+A ++F     
Sbjct: 620 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSS 679

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  +  +Y  +       G  EE   +   ME +G   D+   N ++    ++G+   
Sbjct: 680 NGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITR 739

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
                  +     S    T S  ID+ S GG Y+E  +   E
Sbjct: 740 AGTYLSMIDEKHFSLEASTASLFIDLLS-GGKYQEYHRFLPE 780


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 219/477 (45%), Gaps = 76/477 (15%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   G+  KA   ++       R N  G   S +I    R G++D+A + F+ 
Sbjct: 368 YNALINSLCKGGDLDKAELLYSNMSLMNLRPN--GITYSILIDSFCRSGRLDVAISYFDR 425

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            + +G G TVYA+++LI+   + G    A S+F  M    ++P   T+ ++I    K  +
Sbjct: 426 MIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKD-L 484

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             +   ++++ M+ NG+ P+  TF +L++ +CS   + EA+  LF+E+V R I     TY
Sbjct: 485 QVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASE-LFDELVERKIKPTEVTY 543

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L++  C+  ++D AFE++ +M  K + P+  TY  +I G    GR+  A +   ++  
Sbjct: 544 NVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHK 603

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEAL--------------LVC---------------- 427
             + L+ + Y+ +L  Y + GR  EAL              LVC                
Sbjct: 604 QNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKT 663

Query: 428 -----KEMESSGIRKD-----------------------------------AVTYNALLG 447
                K+M   G+R D                                    VTY AL+ 
Sbjct: 664 FFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMN 723

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           G  K G+ D    +F++M+A  V PN +TY   +D  +K G  KEA+ +     + GL A
Sbjct: 724 GLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLA 782

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           + V ++ +I   CK G    A  +L EMT+ GI P+ VTY+++I  + RS     +V
Sbjct: 783 NTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASV 839



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 189/365 (51%), Gaps = 3/365 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            S ++  L + GK+D A  +       G+   ++ ++ALI++  + G   +A  ++++M 
Sbjct: 333 VSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMS 392

Query: 256 RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
             NL+PN +TY+ +ID+ C  G +D    +  FD M+++G+      +NSL+    + G 
Sbjct: 393 LMNLRPNGITYSILIDSFCRSGRLDV--AISYFDRMIQDGIGETVYAYNSLINGQCKFGD 450

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             AA +LF EM ++G++    T+ +L+   CK  Q+  AF++  +M    I+PNV T++ 
Sbjct: 451 LSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTA 510

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I G     ++ +A  +F E+    I    V+YN ++  Y + G+ ++A  + ++M   G
Sbjct: 511 LISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKG 570

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  D  TY  L+ G    G+  + +   + +    V  N + YS L+  Y + G   EA+
Sbjct: 571 LVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEAL 630

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
               E  Q G+  D+V ++ LID   K    ++   LL +M  +G+RP+ V Y S+ID +
Sbjct: 631 SASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTY 690

Query: 555 GRSAT 559
            +  +
Sbjct: 691 SKEGS 695



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 223/454 (49%), Gaps = 21/454 (4%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY-NAVIDACGKGGVDFK 281
           G+  ++  ++ LI    +     EA+ V  S+    L  ++VTY   V+  C      F+
Sbjct: 255 GFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQ--QFE 312

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             +++ D+M+  G  P     + L+    + G  + A  L  ++   G   ++F YN L+
Sbjct: 313 AGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALI 372

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           +++CKG  +D A  + + M   N+ PN +TYS +ID + ++GRLD A++ F  M   GIG
Sbjct: 373 NSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIG 432

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
               +YN++++   K G    A  +  EM + G+   A T+ +L+ GY K  +  +  ++
Sbjct: 433 ETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKL 492

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           + +M  + ++PN+ T++ LI          EA ++F E  +  +K   V Y+ LI+  C+
Sbjct: 493 YNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCR 552

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVERDLGKQKE-- 576
           +G ++ A  LL++M ++G+ P+  TY  +I      GR +  +  +DD+ +   K  E  
Sbjct: 553 DGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMC 612

Query: 577 -SANLDAMCSQDDKDVQEAGRTDNQIIK--VFGQLVAEKA---GQGKKENRCRQEILCIL 630
            SA L   C +    + EA     ++I+  +   LV       G  K+ +R         
Sbjct: 613 YSALLHGYCQEG--RLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDR-----KTFF 665

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
            + + MH   ++P+ V ++++++  S+  SF+ A
Sbjct: 666 DLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKA 699



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 208/468 (44%), Gaps = 32/468 (6%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           RL + +    + +  +  G+  T  A S L+    + G   +A  +   + R+   PNL 
Sbjct: 307 RLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLF 366

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
            YNA+I++  KGG D      ++ +M    ++P+ IT++ L+    R G  + A + F+ 
Sbjct: 367 VYNALINSLCKGG-DLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDR 425

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+  GI + ++ YN+L++  CK   +  A  +  EM  K + P   T++++I GY K  +
Sbjct: 426 MIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQ 485

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +  A  ++++M   GI  +  ++  ++S      +  EA  +  E+    I+   VTYN 
Sbjct: 486 VQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNV 545

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ GY + GK D+   + E M    + P+  TY  LI      G   +A     +  +  
Sbjct: 546 LIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQN 605

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           +K + + YSAL+   C+ G +  A+S   EM + GI  ++V +  +ID            
Sbjct: 606 VKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDG----------- 654

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                 L +       D +     KD+ + G   + +I         K G  KK   C  
Sbjct: 655 -----ALKQPDRKTFFDLL-----KDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFEC-- 702

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                   +  M   +  PNVVT++A++N   +    + A +L + ++
Sbjct: 703 --------WDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQ 742



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 194/392 (49%), Gaps = 22/392 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+ L + G +D A+ ++              +S LI ++ RSG    AIS F+ M +
Sbjct: 369 NALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQ 428

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +   +  YN++I+   K G D      +F +M   GV+P   TF SL++   +    +
Sbjct: 429 DGIGETVYAYNSLINGQCKFG-DLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQ 487

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L+N+M+  GI  +++T+  L+  +C   +M  A E+  E+  + I P  VTY+ +I
Sbjct: 488 KAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLI 547

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY + G++D A  +  +M   G+  D  +Y  ++S     GR  +A     ++    ++
Sbjct: 548 EGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVK 607

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC------VSPNLLTYSTLIDVYSKGGLY 490
            + + Y+ALL GY ++G      R+ E + A C      ++ +L+ ++ LID   K    
Sbjct: 608 LNEMCYSALLHGYCQEG------RLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDR 661

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           K    + ++    GL+ D V+Y+++ID   K G  + A    D M  E   PNVVTY ++
Sbjct: 662 KTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTAL 721

Query: 551 IDAFGRSATTECTVDDVERD--LGKQKESANL 580
           ++         C   +++R   L K+ ++AN+
Sbjct: 722 MNGL-------CKAGEMDRAGLLFKRMQAANV 746



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 202/447 (45%), Gaps = 34/447 (7%)

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
           ++   F+ L+  Y  S    +A+ +   M   NL P + T +A+++   K    F  V E
Sbjct: 153 SSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVR-KFITVWE 211

Query: 286 IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +FD+ +  GV+PD  T ++++ ++C       A   +   M   G D  I TYN L+  +
Sbjct: 212 LFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKI-RWMEANGFDLSIVTYNVLIHGL 270

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CKG ++  A E+   +  K ++ +VVTY T++ G+ +  + +  + +  EM  LG     
Sbjct: 271 CKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTE 330

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            + + ++    K G+ ++A  +  ++   G   +   YNAL+    K G  D+   ++  
Sbjct: 331 AAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSN 390

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    + PN +TYS LID + + G    A+  F    Q G+   V  Y++LI+  CK G 
Sbjct: 391 MSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGD 450

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           + +A SL  EMT +G+ P   T+ S+I  +              +DL  QK     + M 
Sbjct: 451 LSAAESLFIEMTNKGVEPTATTFTSLISGYC-------------KDLQVQKAFKLYNKMI 497

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
                   + G T N  +  F  L++      K              +F ++ + KIKP 
Sbjct: 498 --------DNGITPN--VYTFTALISGLCSTNKMAEASE--------LFDELVERKIKPT 539

Query: 645 VVTFSAILNACSRCNSFEDASMLLEEL 671
            VT++ ++    R    + A  LLE++
Sbjct: 540 EVTYNVLIEGYCRDGKIDKAFELLEDM 566



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 175/384 (45%), Gaps = 41/384 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+IS L    K+  A  +F+  +      T   ++ LI  Y R G   +A  +   M +
Sbjct: 509 TALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQ 568

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
             L P+  TY  +I   C  G V      +  DD+ +  V+ + + +++LL   C  G L
Sbjct: 569 KGLVPDTYTYRPLISGLCSTGRV--SKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRL 626

Query: 315 WEAARNLFNEMVHRGIDQDIFT-----------------------------------YNT 339
            EA  +   EM+ RGI+ D+                                     Y +
Sbjct: 627 MEAL-SASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTS 685

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++D   K      AFE    M  +   PNVVTY+ +++G  KAG +D A  +F  M+   
Sbjct: 686 MIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAAN 745

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           +  + ++Y   L    K G  +EA+ +   M   G+  + VT+N ++ G+ K G++ E  
Sbjct: 746 VPPNSITYGCFLDNLTKEGNMKEAIGLHHAM-LKGLLANTVTHNIIIRGFCKLGRFHEAT 804

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++  +M  + + P+ +TYSTLI  Y + G    +++++      GL+ D+V Y+ LI   
Sbjct: 805 KVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGC 864

Query: 520 CKNGLVESAVSLLDEMTKEGIRPN 543
           C NG ++ A  L D+M + GI P+
Sbjct: 865 CVNGELDKAFELRDDMLRRGIIPD 888



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 210/491 (42%), Gaps = 79/491 (16%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNL-KPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
            FS  + +Y R   C+     F+S   +NL   N V  + + DA           V I  
Sbjct: 139 VFSHFLDSYKR---CK-----FSSTLGFNLLVQNYVLSSRIFDA-----------VVIVK 179

Query: 289 DMLRNGVQPDRITF----NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
            M  N + P+  T     N LL V     +WE    LF+E V+ G+  D +T + ++ ++
Sbjct: 180 LMFANNLLPEVRTLSALLNGLLKVRKFITVWE----LFDESVNAGVRPDPYTCSAVVRSM 235

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C+      A E +  M A     ++VTY+ +I G  K                     DR
Sbjct: 236 CELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKG--------------------DR 275

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           VS               EA+ V + +   G+  D VTY  L+ G+ +  +++   ++ ++
Sbjct: 276 VS---------------EAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDE 320

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M     SP     S L+D   K G   +A ++  +  + G   ++ +Y+ALI++LCK G 
Sbjct: 321 MVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGD 380

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER----DLGKQKESAN- 579
           ++ A  L   M+   +RPN +TY+ +ID+F RS   +  +   +R     +G+   + N 
Sbjct: 381 LDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNS 440

Query: 580 -LDAMCSQDDKDVQEA---GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
            ++  C   D    E+     T+  +        +  +G  K       ++     ++ K
Sbjct: 441 LINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKD-----LQVQKAFKLYNK 495

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNI 693
           M    I PNV TF+A+++     N   +AS L +EL     +   V + +L+ GY RD  
Sbjct: 496 MIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGK 555

Query: 694 WVQALSLFDEV 704
             +A  L +++
Sbjct: 556 IDKAFELLEDM 566



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 93/453 (20%), Positives = 185/453 (40%), Gaps = 64/453 (14%)

Query: 318 ARNLFNEM-VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           A   FN + +H+ ++    +Y  ++ A+        A  ++  +  +   P  V +S  +
Sbjct: 86  ALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCV-FSHFL 144

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y +          FS      +G + +  N VLS      R  +A+++ K M ++ + 
Sbjct: 145 DSYKRCK--------FSST----LGFNLLVQNYVLS-----SRIFDAVVIVKLMFANNLL 187

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +  T +ALL G  K  K+  V  +F++     V P+  T S ++    +   +  A + 
Sbjct: 188 PEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEK 247

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            R  +  G    +V Y+ LI  LCK   V  AV +   +  +G+  +VVTY +++  F R
Sbjct: 248 IRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCR 307

Query: 557 SATTECTVD--DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
               E  +   D   +LG     A +  +       +++ G+ D+       +LV     
Sbjct: 308 LQQFEAGIQLMDEMVELGFSPTEAAVSGLVD----GLRKQGKIDDAY-----ELVV---- 354

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
                               K+ +    PN+  ++A++N+  +    + A +L   + L 
Sbjct: 355 --------------------KVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLM 394

Query: 675 DNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAF-YNALTDMLWHFGQKRG 731
           + +  G+ + +L+    R      A+S FD + + D    + + YN+L +    FG    
Sbjct: 395 NLRPNGITYSILIDSFCRSGRLDVAISYFDRM-IQDGIGETVYAYNSLINGQCKFGDLSA 453

Query: 732 AQLVVLEGKRRQV------WENVWSESCLDLHL 758
           A+ + +E   + V      + ++ S  C DL +
Sbjct: 454 AESLFIEMTNKGVEPTATTFTSLISGYCKDLQV 486


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 197/394 (50%), Gaps = 4/394 (1%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + ++S L + GK+D A  +     + G G  V +++ ++ A+ R      A +VF++M
Sbjct: 444 ICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNM 503

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               LKPN  TY+ +ID C K   D ++V+E+ + M  + ++ + + + +++    + G 
Sbjct: 504 LEKGLKPNNYTYSILIDGCFKNH-DEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQ 562

Query: 315 WEAARNLFNEMVH-RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
              AR L   M+  +       +YN+++D   K  +MD A     EM A  ISPNV+TY+
Sbjct: 563 TSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYT 622

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           +++DG  K  R+D AL M  EMK  G+ LD  +Y  ++  + K    E A  +  E+   
Sbjct: 623 SLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEE 682

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G+      YN+L+ G+   G       ++++M  D +  +L TY+TLID   K G    A
Sbjct: 683 GLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILA 742

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             ++ E +  GL  D ++Y+ +++ L K G     V + +EM K  + PNV+ YN++I  
Sbjct: 743 SDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG 802

Query: 554 FGRSATTE--CTVDDVERDLGKQKESANLDAMCS 585
             R    +    + D   D G   + A  D + S
Sbjct: 803 HYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 836



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 236/503 (46%), Gaps = 64/503 (12%)

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
           +++G    V A ++LI+ + ++     A+ +F  M+     PN VT++ +I+   K G +
Sbjct: 330 VSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNG-E 388

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
            +  +E +  M   G+ P     ++++    +G   E A  LF+E    G+  ++F  NT
Sbjct: 389 MEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFICNT 447

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVV----------------------------- 370
           +L  +CK  ++D A E++ +M ++ I PNVV                             
Sbjct: 448 ILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKG 507

Query: 371 ------TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
                 TYS +IDG  K     + L + ++M    I ++ V Y T+++   K+G+  +A 
Sbjct: 508 LKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 567

Query: 425 -LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
            L+   +E        ++YN+++ G+ K+G+ D     +E+M A+ +SPN++TY++L+D 
Sbjct: 568 ELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDG 627

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K     +A+++  E K  G+K D+  Y ALI   CK   +ESA +L  E+ +EG+ P+
Sbjct: 628 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPS 687

Query: 544 VVTYNSIIDAFGRSATTECTVDDVER--------DLGKQK-------ESANLDAMCSQDD 588
              YNS+I  F         +D  ++        DLG          +  NL  + S   
Sbjct: 688 QPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNL-ILASDLY 746

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
            ++Q  G   ++I+         K GQ  K          ++ +F++M K  + PNV+ +
Sbjct: 747 TEMQAVGLVPDEIMYTVIVNGLSKKGQFVK----------VVKMFEEMKKNNVTPNVLIY 796

Query: 649 SAILNACSRCNSFEDASMLLEEL 671
           +A++    R  + ++A  L +E+
Sbjct: 797 NAVIAGHYREGNLDEAFRLHDEM 819



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 132/568 (23%), Positives = 258/568 (45%), Gaps = 51/568 (8%)

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           L  N+ ++A   G+     AF+ L++AY +      A+ + N M    + P +   N  +
Sbjct: 145 LVSNLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTL 204

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
            A  +         E++  M+  GV  D  T   L+    R      A  +F+  + RG 
Sbjct: 205 SALVQRN-SITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGA 263

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS-PNVVTYSTMIDGYAKAGRLDDAL 389
           + D   Y+  + A CK   + +A  ++ EM  K +  P+  TY+++I    K G ++DA+
Sbjct: 264 EPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAI 323

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
               EM   GI ++ V+  ++++ + K      AL +  +ME+ G   ++VT++ L+  +
Sbjct: 324 RWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERF 383

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            K G+ ++    +++M++  ++P++    T+I  + KG  ++EA+++F E  + GL A+V
Sbjct: 384 SKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANV 442

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC--TV--D 565
            + + ++  LCK G ++ A  LL +M   GI PNVV+YN+++ A  R    +   TV  +
Sbjct: 443 FICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSN 502

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI----IKVFGQLVAE------KAGQ 615
            +E+ L     + ++       + D Q      NQ+    I+V G +         K GQ
Sbjct: 503 MLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQ 562

Query: 616 GKK-----ENRCRQEILCI---------------------LGVFQKMHKLKIKPNVVTFS 649
             K      N   ++  C+                     +  +++M    I PNV+T++
Sbjct: 563 TSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYT 622

Query: 650 AILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEV 704
           ++++   + N  + A  + +E++      D   YG    L+ G+ + +    A +LF E+
Sbjct: 623 SLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG---ALIHGFCKKSNMESASALFSEL 679

Query: 705 KLMDSSTASAFYNALTDMLWHFGQKRGA 732
                + +   YN+L     + G    A
Sbjct: 680 LEEGLNPSQPVYNSLISGFRNLGNMVAA 707



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 152/302 (50%), Gaps = 6/302 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  ++  L   G+ SKA +  A  ++ E+R        +++I    + G++D A   +E 
Sbjct: 550 YQTIINGLCKVGQTSKARELLANMIE-EKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEE 608

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
               G    V  +++L+    ++    +A+ + + MK   +K ++  Y A+I   C K  
Sbjct: 609 MCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKS- 667

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            + +    +F ++L  G+ P +  +NSL++     G   AA +L+ +M+  G+  D+ TY
Sbjct: 668 -NMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTY 726

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TL+D + K   + LA ++  EM A  + P+ + Y+ +++G +K G+    + MF EMK 
Sbjct: 727 TTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKK 786

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             +  + + YN V++ + + G  +EA  +  EM   GI  D  T++ L+   GK GK+  
Sbjct: 787 NNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS--GKVGKFQP 844

Query: 458 VR 459
           +R
Sbjct: 845 IR 846


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 154/269 (57%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +FD+MLR GV P  +TFN+L++   +     +A  L   M   G+  D++TY   +  +C
Sbjct: 266 MFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLC 325

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  ++  A E+  EM  + ++PN V ++T+ID + K G +   L +  EM   GI  D V
Sbjct: 326 KAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLV 385

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +YN + +   ++   + A  + +EM ++G++ D VTY  L+ G+ K+G+ D    M ++M
Sbjct: 386 AYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEM 445

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             + V+ + +TY+TLI   SK G   ++ +I  E  +AGL+ D   Y+ +IDA CKN  V
Sbjct: 446 SDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDV 505

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++   LL EM  +G +P VVTYN +++ F
Sbjct: 506 KTGFKLLKEMQNKGRKPGVVTYNVVMNGF 534



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 183/362 (50%), Gaps = 4/362 (1%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R GK+  A+N+F+  L  G   TV  F+ L+S   ++     A ++   M +  + P++ 
Sbjct: 256 RSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVY 315

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TY A +    K G   +  VE+F++M   GV P+ + F +L+    + G   A   L  E
Sbjct: 316 TYGAFMQGLCKAG-RIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHRE 374

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M  RGI  D+  YN L + +C+   +  A +I+ EM    + P+ VTY+T+IDG+ K G 
Sbjct: 375 MATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGE 434

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD A+ M  EM   G+ LD V+Y T++S  +K GR  ++  +  EM  +G+  D  TY  
Sbjct: 435 LDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTM 494

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++  + K        ++ ++M+     P ++TY+ +++ +   G  K A  +       G
Sbjct: 495 VIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIG 554

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           +  D + Y+ L+D  CK+G V  A  L    + +G+  +   Y S+I+ F +  +T+   
Sbjct: 555 VCPDDITYNILLDGHCKHGKVRDAEEL---KSAKGMVSDFGLYTSLINEFVKKKSTKSYH 611

Query: 565 DD 566
           D+
Sbjct: 612 DN 613



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 153/290 (52%), Gaps = 7/290 (2%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           +L  GV P+   FN L+    R G   +ARN+F+EM+ RG+   + T+NTL+  +CK + 
Sbjct: 235 LLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASD 294

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++ A  +   M    ++P+V TY   + G  KAGR+ DA+ MF EM+  G+  + V + T
Sbjct: 295 LNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTT 354

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++  + K G     L + +EM + GI+ D V YNAL  G  +         + E+M+ + 
Sbjct: 355 LIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNG 414

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + P+ +TY+TLID + K G    AM++ +E    G+  D V Y+ LI  L K+G    + 
Sbjct: 415 LKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSE 474

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
            +L EM + G+ P+  TY  +IDAF       C   DV+      KE  N
Sbjct: 475 RILCEMMEAGLEPDNTTYTMVIDAF-------CKNSDVKTGFKLLKEMQN 517



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 174/352 (49%), Gaps = 1/352 (0%)

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
           ++ RL  V  A   +   L+ G       F+ L+    RSG    A ++F+ M R  + P
Sbjct: 218 LMNRLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPP 277

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
            +VT+N ++    K   D      +   M + GV PD  T+ + +    + G  + A  +
Sbjct: 278 TVVTFNTLMSGMCKAS-DLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEM 336

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F EM  RG++ +   + TL+DA CK   +    E+  EM  + I  ++V Y+ + +G  +
Sbjct: 337 FEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCR 396

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
              L  A ++  EM+  G+  D+V+Y T++  + K G  + A+ + +EM   G+  D VT
Sbjct: 397 VRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVT 456

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  L+ G  K G+  +  R+  +M    + P+  TY+ +ID + K    K   ++ +E +
Sbjct: 457 YTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQ 516

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             G K  VV Y+ +++  C  G +++A  LL+ M   G+ P+ +TYN ++D 
Sbjct: 517 NKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDG 568



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 148/326 (45%), Gaps = 34/326 (10%)

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           + P    ++ ++    ++G+L  A NMF EM   G+    V++NT++S   K      A 
Sbjct: 240 VPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSAN 299

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +   M  +G+  D  TY A + G  K G+  +   MFE+M+   V+PN + ++TLID +
Sbjct: 300 ALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAH 359

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            K G     +++ RE    G+K D+V Y+AL + LC+   +++A  +++EM   G++P+ 
Sbjct: 360 CKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDK 419

Query: 545 VTYNSIIDAFGRS------------------ATTECTVDDVERDLGKQKESANLD-AMCS 585
           VTY ++ID F +                   A  E T   +   L K   S + +  +C 
Sbjct: 420 VTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCE 479

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
             +  ++    T   +I  F +    K G                 + ++M     KP V
Sbjct: 480 MMEAGLEPDNTTYTMVIDAFCKNSDVKTG---------------FKLLKEMQNKGRKPGV 524

Query: 646 VTFSAILNACSRCNSFEDASMLLEEL 671
           VT++ ++N        ++A MLL  +
Sbjct: 525 VTYNVVMNGFCILGQMKNADMLLNAM 550



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 147/300 (49%), Gaps = 12/300 (4%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           D YT+   ++ L   G    A++   F   RE   N    + + +I    + G V     
Sbjct: 313 DVYTYGAFMQGLCKAGRIQDAVE--MFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLE 370

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-C 273
           +       G    + A++AL +   R    + A  +   M+   LKP+ VTY  +ID  C
Sbjct: 371 LHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFC 430

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
            +G +D    +E+  +M   GV  D +T+ +L++  S+ G    +  +  EM+  G++ D
Sbjct: 431 KEGELDM--AMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPD 488

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             TY  ++DA CK + +   F+++ EM  K   P VVTY+ +++G+   G++ +A  + +
Sbjct: 489 NTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLN 548

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS-GIRKDAVTYNALLGGYGKQ 452
            M  +G+  D ++YN +L  + K G+  +A    +E++S+ G+  D   Y +L+  + K+
Sbjct: 549 AMLNIGVCPDDITYNILLDGHCKHGKVRDA----EELKSAKGMVSDFGLYTSLINEFVKK 604



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 135/286 (47%), Gaps = 20/286 (6%)

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  +   +N ++    + G+   A  +  EM   G+    VT+N L+ G  K    +  
Sbjct: 239 GVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSA 298

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +   M    V+P++ TY   +    K G  ++A+++F E ++ G+  + V+++ LIDA
Sbjct: 299 NALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDA 358

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKE 576
            CK G V + + L  EM   GI+ ++V YN++ +   R    +   D VE  R+ G + +
Sbjct: 359 HCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPD 418

Query: 577 SAN----LDAMCSQDDKDV-----QEAGRTDNQIIKV-FGQLVAEKAGQGKKENRCRQEI 626
                  +D  C + + D+     QE       + +V +  L++  +  G+  +   + I
Sbjct: 419 KVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVD--SERI 476

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           LC      +M +  ++P+  T++ +++A  + +  +    LL+E++
Sbjct: 477 LC------EMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQ 516



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 141/337 (41%), Gaps = 26/337 (7%)

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           +L    EA     ++  +G+  +A  +N L+    + GK    R MF++M    V P ++
Sbjct: 221 RLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVV 280

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           T++TL+    K      A  +     +AG+  DV  Y A +  LCK G ++ AV + +EM
Sbjct: 281 TFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEM 340

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
            + G+ PN V + ++IDA        C   +V   L   +E A           +    G
Sbjct: 341 RERGVNPNTVVFTTLIDA-------HCKEGNVAAGLELHREMATRGIKTDLVAYNALANG 393

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENR----------CRQ-EILCILGVFQKMHKLKIKPN 644
               + +K    +V E    G K ++          C++ E+   + + Q+M    +  +
Sbjct: 394 LCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALD 453

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYGVAHGLLMGYRDNIWVQ-ALS 699
            VT++ +++  S+     D+  +L E+       DN  Y +   ++  +  N  V+    
Sbjct: 454 EVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTM---VIDAFCKNSDVKTGFK 510

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVV 736
           L  E++          YN + +     GQ + A +++
Sbjct: 511 LLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLL 547


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 174/331 (52%), Gaps = 1/331 (0%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
            + L+S   ++G   EAI ++  +       N VT NA+I    + G   +   ++  +M
Sbjct: 410 LTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSK-EEAAKLLKEM 468

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           L  G+  D I++N+L+  C + G  E    L  EMV RGI  D++TYN LL  +C   ++
Sbjct: 469 LERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKI 528

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           + A  +  E       P+  TY  MIDGY KA R+++   +F EM  + I  + V Y T+
Sbjct: 529 EEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTL 588

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +  Y + G   EA  +  +M S GI + + TY++L+ G    G  D   ++ ++M+ + +
Sbjct: 589 IRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGL 648

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           SPN++ Y+ LI  Y K G   +   I +E     +  + + Y+ +I+  CK G +++A  
Sbjct: 649 SPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAK 708

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           LL+EM ++GI P+ VTYN++ + F +    E
Sbjct: 709 LLNEMAQKGIVPDAVTYNALTNGFCKEGKME 739



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 205/403 (50%), Gaps = 5/403 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +T ++  L  +  +  A+      + R  + ND   L + ++S L + GK   A  ++  
Sbjct: 375 FTSVIHRLCLKCRFDSALLFIMEMLLRNFKPND--GLLTLLVSGLCQNGKQSEAIELWYR 432

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L +G+       +ALI     +G  +EA  +   M    L  + ++YN +I AC K G 
Sbjct: 433 LLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEG- 491

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             +   ++ ++M+R G+QPD  T+N LL  +C+ G + EA   L++E    G   D +TY
Sbjct: 492 KVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAG-GLWHECKKNGNFPDAYTY 550

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             ++D  CK  +++   ++  EM    I  N V Y T+I  Y + G + +A  +  +M+ 
Sbjct: 551 GIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRS 610

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI     +Y++++   + +G  + A  +  EM   G+  + V Y AL+GGY K G+  +
Sbjct: 611 RGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHK 670

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
           V  + ++M  + V PN +TY+ +I+ + K G  K A ++  E  Q G+  D V Y+AL +
Sbjct: 671 VDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTN 730

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
             CK G +E A+ + D M+  GI  + +TY ++ID + +  T 
Sbjct: 731 GFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHKPLTV 773



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 141/559 (25%), Positives = 253/559 (45%), Gaps = 40/559 (7%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           K  + ++S L +  +V ++  +F+   + G    VY FS +++A+   G   +AI +F  
Sbjct: 163 KTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRK 222

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M++  + PN+VTYN +I   C  G +D     +  + M +  V+P  +T+  L+    + 
Sbjct: 223 MEKVGVAPNVVTYNNIIHGLCKNGRLD--EAFQFKEKMEKERVKPSLVTYGVLINGLVKL 280

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
             ++ A  +  EM  RG   +   YNTL+D  C+   +  A +I  +M +  ISPN VT 
Sbjct: 281 ERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTC 340

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +++I GY K+ +++ A ++  EM   G  +++ ++ +V+       RF+ ALL   EM  
Sbjct: 341 NSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLL 400

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
              + +      L+ G  + GK  E   ++ ++     + N +T + LI    + G  +E
Sbjct: 401 RNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEE 460

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A ++ +E  + GL  D + Y+ LI A CK G VE    L +EM + GI+P++ TYN ++ 
Sbjct: 461 AAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLH 520

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK--DVQEAGRTDNQIIKVFGQLVA 610
                    C       ++GK +E+  L   C ++    D    G      I + G   A
Sbjct: 521 GL-------C-------NMGKIEEAGGLWHECKKNGNFPDAYTYG------IMIDGYCKA 560

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
            +  +G+K             +FQ+M  +KI+ N V +  ++ A     +  +A  L ++
Sbjct: 561 NRVEEGEK-------------LFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDD 607

Query: 671 LRLFDNQVYGVAHGLLMGYRDNIWV--QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           +R          +  L+    NI +   A  L DE++    S     Y AL       GQ
Sbjct: 608 MRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQ 667

Query: 729 KRGAQLVVLEGKRRQVWEN 747
                 ++ E     V  N
Sbjct: 668 MHKVDSILQEMSINNVHPN 686



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/516 (25%), Positives = 227/516 (43%), Gaps = 40/516 (7%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKRE-ERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           Y  ++  L   G   +A   F F  K E ER          +I+ L +L + D A  I +
Sbjct: 235 YNNIIHGLCKNGRLDEA---FQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILK 291

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
              + GY      ++ LI  Y R G    A+ + + M    + PN VT N++I    K  
Sbjct: 292 EMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSN 351

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              +H   + ++ML  G   ++ TF S++        +++A     EM+ R    +    
Sbjct: 352 -QMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLL 410

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             L+  +C+  +   A E+   +  K  + N VT + +I G  +AG  ++A  +  EM  
Sbjct: 411 TLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLE 470

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+ LD +SYNT++    K G+ EE   + +EM   GI+ D  TYN LL G    GK +E
Sbjct: 471 RGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEE 530

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              ++ + K +   P+  TY  +ID Y K    +E  ++F+E     ++ + V+Y  LI 
Sbjct: 531 AGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIR 590

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
           A C+NG +  A  L D+M   GI     TY+S+I         +               S
Sbjct: 591 AYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVD---------------S 635

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE--KAGQGKKENRCRQEILCILGVFQK 635
           AN      Q   ++++ G + N +   +  L+    K GQ  K          +  + Q+
Sbjct: 636 AN------QLLDEMRKEGLSPNVV--CYTALIGGYCKLGQMHK----------VDSILQE 677

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           M    + PN +T++ ++N   +  + + A+ LL E+
Sbjct: 678 MSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEM 713



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/519 (24%), Positives = 235/519 (45%), Gaps = 23/519 (4%)

Query: 250 VFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC 309
           +F+ +    L P+L T N ++ +  K   + K   ++FD M   GV PD   F++++   
Sbjct: 149 LFSLLANKGLFPSLKTCNFLLSSLVKAN-EVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
             GG  + A  LF +M   G+  ++ TYN ++  +CK  ++D AF+   +M  + + P++
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           VTY  +I+G  K  R D+A  +  EM   G   + V YNT++  Y ++G    AL +  +
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M S+GI  ++VT N+L+ GY K  + +    + E+M       N  T++++I        
Sbjct: 328 MISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCR 387

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
           +  A+    E      K +  L + L+  LC+NG    A+ L   + ++G   N VT N+
Sbjct: 388 FDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNA 447

Query: 550 IIDAFGRSATTECTV----DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK-- 603
           +I     + + E       + +ER L     S N   +    +  V+E  +   ++++  
Sbjct: 448 LIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRG 507

Query: 604 ------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
                  +  L+      GK E           G++ +  K    P+  T+  +++   +
Sbjct: 508 IQPDMYTYNMLLHGLCNMGKIEEAG--------GLWHECKKNGNFPDAYTYGIMIDGYCK 559

Query: 658 CNSFEDASMLLEELRLFDNQVYGVAHG-LLMGYRDNIWV-QALSLFDEVKLMDSSTASAF 715
            N  E+   L +E+     +   V +G L+  Y +N  + +A  L D+++       SA 
Sbjct: 560 ANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSAT 619

Query: 716 YNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
           Y++L   L + G    A  ++ E ++  +  NV   + L
Sbjct: 620 YSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTAL 658


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 196/396 (49%), Gaps = 8/396 (2%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR-YNLKPNLV 264
           LG V+ AK + +    +G    V  ++ LI  Y +     EA  V   M+    L P+  
Sbjct: 274 LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDER 333

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
            Y  +ID  C  G +D    V + D+MLR G++ +    NSL+   C RG + EA   + 
Sbjct: 334 AYGVLIDGYCRTGKID--DAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEA-EGVI 390

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
             MV   +  D ++YNTLLD  C+      AF +  +M  + I P V+TY+T++ G  + 
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G  DDAL ++  M   G+  D V Y+T+L    K+  FE A  + K++ + G  K  +T+
Sbjct: 451 GAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           N ++ G  K GK  E   +F++MK    SP+ +TY TLID Y K     +A ++    ++
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
             +   + +Y++LI  L K+  +     LL EM   G+ PN+VTY ++ID + +    + 
Sbjct: 571 EXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 630

Query: 563 TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
                  ++ +   SAN+  +CS     +   GR D
Sbjct: 631 AFSSY-FEMTENGLSANI-IICSTMVSGLYRLGRID 664



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 131/511 (25%), Positives = 239/511 (46%), Gaps = 53/511 (10%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R GK+D A  + +  L  G    ++  ++LI+ Y + G   EA  V   M  +NLKP+  
Sbjct: 344 RTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSY 403

Query: 265 TYNAVIDACGKGGVDFKHVVEIF---DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +YN ++D   + G    H  E F   D ML+ G++P  +T+N+LL    R G ++ A  +
Sbjct: 404 SYNTLLDGYCREG----HTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI 459

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           ++ M+  G+  D   Y+TLLD + K    + A  +  ++ A+  + + +T++TMI G  K
Sbjct: 460 WHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK 519

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G++ +A  +F +MK LG   D ++Y T++  Y K     +A  V   ME   I      
Sbjct: 520 MGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEM 579

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN+L+ G  K  +  E   +  +M    ++PN++TY  LID + K G+  +A   + E  
Sbjct: 580 YNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 639

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN----------VVTYNSII 551
           + GL A++++ S ++  L + G ++ A  L+ +M   G  P+                I 
Sbjct: 640 ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIA 699

Query: 552 DAFGRSATTECTVDDVERDL--------GKQKESANLDAMCSQDD--------------- 588
           D+   S  T    +++  ++        GK  ++    +M S                  
Sbjct: 700 DSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 759

Query: 589 ---KDVQEAGRTDNQIIK--VFGQLVAEKA---GQGKKENRCRQEILCILGVFQKMHKLK 640
               +V EA R  +++++  +   +V   A   G  K EN  R + L     F K+H+  
Sbjct: 760 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL-----FHKLHQKG 814

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           + PNVVT++ +++   +  + + A  L +++
Sbjct: 815 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/518 (24%), Positives = 230/518 (44%), Gaps = 113/518 (21%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + +++I+   + G++  A+ +    ++       Y+++ L+  Y R G+  EA ++ + M
Sbjct: 369 ICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 428

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD---------------- 298
            +  ++P ++TYN ++    + G  F   ++I+  M++ GV PD                
Sbjct: 429 LQEGIEPTVLTYNTLLKGLCRVGA-FDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMEN 487

Query: 299 -------------------RITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                              RITFN++++ +C  G + E A  +F++M   G   D  TY 
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVE-AEEIFDKMKDLGCSPDGITYR 546

Query: 339 TLLDAICKGAQMDLAFEI-----------------------------------MAEMPAK 363
           TL+D  CK + +  AF++                                   + EM  +
Sbjct: 547 TLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIR 606

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
            ++PN+VTY  +IDG+ K G LD A + + EM   G+  + +  +T++S   +LGR +EA
Sbjct: 607 GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 666

Query: 424 LLVCKEMESSGIRKD--------------------------------AVTYNALLGGYGK 451
            L+ ++M   G   D                                 + YN  + G  K
Sbjct: 667 NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCK 726

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            GK D+ RR F  +      P+  TY TLI  YS  G   EA ++  E  + GL  ++V 
Sbjct: 727 TGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 786

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           Y+ALI+ LCK+  V+ A  L  ++ ++G+ PNVVTYN++ID + +    +      ++ +
Sbjct: 787 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846

Query: 572 GKQ------KESANLDAMCSQDDKDVQEAGRTDNQIIK 603
            +         SA ++ +C     D++ + +  NQ+IK
Sbjct: 847 EEGISPSVVTYSALINGLCKHG--DIERSMKLLNQMIK 882



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 221/481 (45%), Gaps = 56/481 (11%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL+ L   G +  A+Q +   +K     ++ G   S ++  L ++   + A  +++ 
Sbjct: 440 YNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVG--YSTLLDGLFKMENFEGASTLWKD 497

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L  G+  +   F+ +IS   + G   EA  +F+ MK     P+ +TY  +ID   K   
Sbjct: 498 ILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS- 556

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR-----NLFNEMVHRGIDQD 333
           +     ++   M R  + P    +NSL++     GL+++ R     +L  EM  RG+  +
Sbjct: 557 NVGQAFKVKGAMEREXISPSIEMYNSLIS-----GLFKSRRLVEXTDLLTEMGIRGLTPN 611

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF- 392
           I TY  L+D  CK   +D AF    EM    +S N++  STM+ G  + GR+D+A N+  
Sbjct: 612 IVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA-NLLM 670

Query: 393 -----------------SEMKFLGI-----GLDR----------VSYNTVLSIYAKLGRF 420
                            S++++  I      LD           + YN  ++   K G+ 
Sbjct: 671 QKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKV 730

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           ++A      +   G   D  TY  L+ GY   G  DE  R+ ++M    + PN++TY+ L
Sbjct: 731 DDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNAL 790

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I+   K      A ++F +  Q GL  +VV Y+ LID  CK G +++A  L D+M +EGI
Sbjct: 791 INGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGI 850

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERD--LGKQKESANLDAMCSQDDKDVQEAGRTD 598
            P+VVTY+++I+         C   D+ER   L  Q   A +D+   +    VQ   +T 
Sbjct: 851 SPSVVTYSALINGL-------CKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTS 903

Query: 599 N 599
           N
Sbjct: 904 N 904



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 182/381 (47%), Gaps = 39/381 (10%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG------------ 277
            F  ++  Y   G  + A+ VF++M +    P+L + N++++   K G            
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 278 VDFKHVVEIF----------------------DDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           +    V ++F                        M   GV+P+ +T++SL+      G  
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYST 374
           EAA+ +   M  +G+ +++ TY  L+   CK  +MD A +++  M  +  + P+   Y  
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDGY + G++DDA+ +  EM  LG+  +    N++++ Y K G   EA  V   M    
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++ D+ +YN LL GY ++G   E   + ++M  + + P +LTY+TL+    + G + +A+
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           QI+    + G+  D V YS L+D L K    E A +L  ++   G   + +T+N++I   
Sbjct: 458 QIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517

Query: 555 ---GRSATTECTVDDVERDLG 572
              G+    E   D + +DLG
Sbjct: 518 CKMGKMVEAEEIFDKM-KDLG 537



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 226/501 (45%), Gaps = 78/501 (15%)

Query: 255 KRYNLKPNLVTY--------------------NAVIDAC---GKGGVDFKHVVEIFDDML 291
           K+ N +PN+ +Y                    N ++D C    +G V +  +V ++ +  
Sbjct: 94  KQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREF- 152

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
                P    F+ +L V    GL + A  +F+ M   G    + + N+LL+ + K  +  
Sbjct: 153 --AFSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETH 208

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A  +  +M    I P+V   S M++ + K G++D+A     +M+ LG+  + V+Y++++
Sbjct: 209 TAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLI 268

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD-CV 470
           + Y  LG  E A  V K M   G+ ++ VTY  L+ GY KQ K DE  ++   M+ +  +
Sbjct: 269 NGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAAL 328

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            P+   Y  LID Y + G   +A+++  E  + GLK ++ + ++LI+  CK G +  A  
Sbjct: 329 VPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 388

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCSQDDK 589
           ++  M    ++P+  +YN+++D + R               G   E+ NL D M  +   
Sbjct: 389 VITRMVDWNLKPDSYSYNTLLDGYCRE--------------GHTSEAFNLCDKMLQE--- 431

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
            ++    T N ++K   ++ A                   L ++  M K  + P+ V +S
Sbjct: 432 GIEPTVLTYNTLLKGLCRVGAFDDA---------------LQIWHLMMKXGVAPDEVGYS 476

Query: 650 AILNACSRCNSFEDASMLLEEL--------RL-FDNQVYGVAHGLLMGYRDNIWVQALSL 700
            +L+   +  +FE AS L +++        R+ F+  + G+     MG      V+A  +
Sbjct: 477 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK---MGK----MVEAEEI 529

Query: 701 FDEVKLMDSSTASAFYNALTD 721
           FD++K +  S     Y  L D
Sbjct: 530 FDKMKDLGCSPDGITYRTLID 550



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 135/267 (50%), Gaps = 6/267 (2%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + S M+S L RLG++D A  + +  ++ G+      F  L S    +   + A S+  S 
Sbjct: 649 ICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF--LKSDIRYAAIQKIADSLDESC 706

Query: 255 KRYNLKPNLVTYN-AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           K + L PN + YN A+   C  G VD       F  +   G  PD  T+ +L+   S  G
Sbjct: 707 KTF-LLPNNIVYNIAIAGLCKTGKVD--DARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             + A  L +EM+ RG+  +I TYN L++ +CK   +D A  +  ++  K + PNVVTY+
Sbjct: 764 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYN 823

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+IDGY K G +D A  +  +M   GI    V+Y+ +++   K G  E ++ +  +M  +
Sbjct: 824 TLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRR 460
           G+    + Y  L+ G  K   Y+E+ +
Sbjct: 884 GVDSKLIEYCTLVQGGFKTSNYNEMSK 910



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 18/302 (5%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+I    + G +D A + +      G    +   S ++S   R G   EA  +   M  +
Sbjct: 617 ALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 676

Query: 258 NLKPNL-------VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCS 310
              P+        + Y A+           + + +  D+  +  + P+ I +N  +A   
Sbjct: 677 GFFPDHECFLKSDIRYAAI-----------QKIADSLDESCKTFLLPNNIVYNIAIAGLC 725

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           + G  + AR  F+ +  +G   D FTY TL+        +D AF +  EM  + + PN+V
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 785

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TY+ +I+G  K+  +D A  +F ++   G+  + V+YNT++  Y K+G  + A  +  +M
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
              GI    VTY+AL+ G  K G  +   ++  QM    V   L+ Y TL+    K   Y
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNY 905

Query: 491 KE 492
            E
Sbjct: 906 NE 907


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 210/405 (51%), Gaps = 33/405 (8%)

Query: 176 IQCFAFAV---KREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYA 230
           I C+  A+   ++ E K     L +   +I+   +LG+  L+ ++F   L +GY   V  
Sbjct: 73  INCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVIT 132

Query: 231 FSALIS------AYGR--SGYCQ--EAISVFNSMKRYN---LKPNLVTYNAVIDACGKGG 277
            + LI       +YG   +G C+  +A +    ++R +   ++PN+V YN +ID+  K  
Sbjct: 133 LTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCK-- 190

Query: 278 VDFKHVVEIFD---DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
              K V E FD   +M+  G+ PD +T+++L++     G  + A +LFN+M+   I  D+
Sbjct: 191 --VKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDV 248

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
           +T+N L+D  CK  +M     + A M  + I PNVVTY +++DGY    +++ A ++F+ 
Sbjct: 249 YTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNT 308

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M   G+  D  SYN +++ + K+ + +EA+ + K+M    I  + VTY +L+ G  K GK
Sbjct: 309 MAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGK 368

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM--------QIFREFKQAGLK 506
                ++ ++M    V P+++TYS+++D   K     +A+        Q+F +    G  
Sbjct: 369 ISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYN 428

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            DV  Y+ +I   C  GL   A++LL +M   G  P+  TY  II
Sbjct: 429 LDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIII 473



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 189/346 (54%), Gaps = 20/346 (5%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA---CGKGGVDFKHVV 284
           ++ F  ++ +  +      AIS+   M+   +  NLVT N +I+     G+  + F    
Sbjct: 60  IFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSF---- 115

Query: 285 EIFDDMLRNGVQPDRITFNSLL-AVC------------SRGGLWEAARNLFNEMVHRGID 331
            +F ++L+ G  P+ IT  +L+  +C             + G   AA  L   +  + + 
Sbjct: 116 SVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQ 175

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            ++  YNT++D++CK   ++ AF++ +EM ++ ISP+VVTYS +I G+   G+L DA+++
Sbjct: 176 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDL 235

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F++M    I  D  ++N ++  + K G+ +E   V   M   GI+ + VTY +L+ GY  
Sbjct: 236 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 295

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
             + ++   +F  M    V+P+  +Y+ +I+ + K     EAM +F++     +  +VV 
Sbjct: 296 VKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVT 355

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           Y++LID LCK+G +  A+ L+DEM   G+ P+++TY+SI+DA  ++
Sbjct: 356 YTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKN 401



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 183/363 (50%), Gaps = 15/363 (4%)

Query: 153 LCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKVD 210
           LC    Y  L+  L   G+   A+Q     ++R + K  Q  +   + +I  + ++  V+
Sbjct: 140 LCLKVSYGTLINGLCKVGQARAALQ----LLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 195

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
            A +++   ++EG    V  +SALIS +   G  ++AI +FN M   N+KP++ T+N ++
Sbjct: 196 EAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 255

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           D   K G   K    +F  M++ G++P+ +T+ SL+           A ++FN M   G+
Sbjct: 256 DGFCKDG-KMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGV 314

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
           + D  +YN +++  CK  ++D A  +  +M  KNI PNVVTY+++IDG  K+G++  AL 
Sbjct: 315 NPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALK 374

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS--------GIRKDAVTY 442
           +  EM   G+  D ++Y+++L    K  + ++A+ +  +++          G   D   Y
Sbjct: 375 LVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAY 434

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             ++ G+  +G ++E   +  +M+ +   P+  TY  +I    K      A ++ RE   
Sbjct: 435 TVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIA 494

Query: 503 AGL 505
            GL
Sbjct: 495 RGL 497


>gi|297805706|ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316573|gb|EFH46996.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 680

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 132/543 (24%), Positives = 256/543 (47%), Gaps = 43/543 (7%)

Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFETA 219
           F++  L    +W +++    +    EE K      A + ++  + R  +  +A  +F+  
Sbjct: 126 FMVSLLSRENDWQRSLALLDWV--HEEAKYTPSVFAYNVVLRNVLRAKQFGIAHGLFDEM 183

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
                    Y +S LI+++G+ G    A+S    M++  +  +LV Y+ +I+   +   D
Sbjct: 184 RQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE-LSRRLCD 242

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
           +   + IF  + R+G+ PD + +NS++ V  +  L++ AR L  EM   G+  +  +Y+T
Sbjct: 243 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYST 302

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           LL    +  +   A  + AEM   N   ++ T + MID Y +   + +A  +F  ++ + 
Sbjct: 303 LLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD 362

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I  + VSYNT+L +Y +   F EA+ + + M+   I ++ VTYN ++  YGK  ++++  
Sbjct: 363 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 422

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            + ++M++  + PN +TYST+I ++ K G    A  +F++ + +G++ D VLY  +I A 
Sbjct: 423 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 482

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
            + GL+  A  LL E+      P+ +   + I    ++ +TE            +     
Sbjct: 483 ERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGSTE------------EATWVF 526

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
             A  S + KD           I VFG ++   +          Q  + ++ VF+KM   
Sbjct: 527 RQAFESGEVKD-----------ISVFGCMINLYSRN--------QRYVNVIEVFEKMRTA 567

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWV 695
              P+    + +LNA  +   FE A  +  E++    +F ++V+     L    +D   V
Sbjct: 568 GYFPDSNAIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMV 627

Query: 696 QAL 698
           ++L
Sbjct: 628 ESL 630



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/563 (23%), Positives = 263/563 (46%), Gaps = 58/563 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRY 257
           M  +L  + +    K +F  +L   Y +   +   ++S   R    Q ++++ + + +  
Sbjct: 94  MDELLASIHQTQNEKELF--SLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEA 151

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
              P++  YN V+    +    F     +FD+M +  + PDR T+++L+    + G++++
Sbjct: 152 KYTPSVFAYNVVLRNVLRAK-QFGIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDS 210

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A +   +M    +  D+  Y+ L++   +      A  I + +    I+P++V Y++MI+
Sbjct: 211 ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN 270

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            Y KA    +A  +  EM   G+  + VSY+T+LS+Y +  +F EAL V  EM+      
Sbjct: 271 VYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPL 330

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  T N ++  YG+     E  R+F  ++   + PN+++Y+T++ VY +  L+ EA+ +F
Sbjct: 331 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 390

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           R  ++  ++ +VV Y+ +I    K    E A +L+ EM   GI PN +TY++II  +G++
Sbjct: 391 RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 450

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
                         GK   +A L        + ++ +G   +Q++     +  E+ G   
Sbjct: 451 --------------GKLDRAATL-------FQKLRSSGVEIDQVLYQTMIVAYERVGLMG 489

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML----LEELRL 673
              R              +H+LK+  N+   +AI    ++  S E+A+ +     E   +
Sbjct: 490 HAKRL-------------LHELKLPDNIPRETAI-TILAKAGSTEEATWVFRQAFESGEV 535

Query: 674 FDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAF--YNALTDMLWHFGQKRG 731
            D  V+G    L    R+  +V  + +F++++     TA  F   NA+  +L  +G++R 
Sbjct: 536 KDISVFGCMINLYS--RNQRYVNVIEVFEKMR-----TAGYFPDSNAIAMVLNAYGKQRE 588

Query: 732 AQLVVLEGKRRQVWENVWSESCL 754
            +      K   V+  +  E C+
Sbjct: 589 FE------KADTVYREMQEEGCV 605


>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
           sulphuraria]
          Length = 821

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 188/401 (46%), Gaps = 41/401 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S  I+ LGRL +   A+        E     +Y +SALI   G+ G C  A+S F  M R
Sbjct: 316 SIYITALGRLERYSEAERSLIWMREEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSR 375

Query: 257 Y-NLKPNLVTYNAVI--------DACG--------------KGGV--------------- 278
             N+ PN VTYNAVI        + CG              KG +               
Sbjct: 376 IDNIAPNTVTYNAVIKIVSRCKRNDCGGITRAMSLLREMATKGCIPDVVTYATLIDAFSK 435

Query: 279 --DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
             + +  +++F +M    V+P+   ++SL++   R G  E A  +F EM H  I  D+F 
Sbjct: 436 RMEPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFA 495

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM- 395
           +N L+D   K  Q+D AFEI   M    I P+ +T++ +I    KA     AL    +M 
Sbjct: 496 FNALIDGFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASGKAKNSIRALEAMGDMT 555

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           +  G+  DR SYN ++    K G F +A  V +EM + GIR   VT+NAL+ G  +    
Sbjct: 556 EIYGLTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALIYGASRSHDL 615

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
               ++ + M  + ++P+  T +TLI   ++      A ++  +FKQ G+  D V ++  
Sbjct: 616 AASFKIVDLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTF 675

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           IDA+ K    E    LL EM   GI P+ VT N+I+   GR
Sbjct: 676 IDAVGKLDSSEKMFELLSEMESRGISPSKVTLNTIVGCCGR 716



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 199/394 (50%), Gaps = 8/394 (2%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +L++   K C  D  T+  L+     R E  +A++ F    +   + N+     S++IS 
Sbjct: 410 LLREMATKGCIPDVVTYATLIDAFSKRMEPERALKLFQEMKEANVKPNNY--CYSSLISA 467

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
             R G V+ A  IFE   +E     V+AF+ALI  +G+     +A  +++ M++  ++P+
Sbjct: 468 FCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQIQPD 527

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
            +T+NA+I A GK     + +  + D     G+ PDR ++N+L+  C + G +  A  +F
Sbjct: 528 RITFNALISASGKAKNSIRALEAMGDMTEIYGLTPDRHSYNALIDACGKSGDFTKAYEVF 587

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            EM  +GI     T+N L+    +   +  +F+I+  M  + ++P+  T +T+I    + 
Sbjct: 588 EEMRTKGIRPCTVTFNALIYGASRSHDLAASFKIVDLMLQEGLNPDAYTMNTLISACNRR 647

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
             L  A  +  + K LG+  D V++NT +    KL   E+   +  EMES GI    VT 
Sbjct: 648 QDLSTAFEVLEKFKQLGVHPDNVTFNTFIDAVGKLDSSEKMFELLSEMESRGISPSKVTL 707

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK- 501
           N ++G  G++GK D + R F       + P+ +T+S LI+ Y    L  +A+  +   K 
Sbjct: 708 NTIVGCCGRRGKIDLMERGFHMFHEKRLEPDSVTFSLLIENYVSHHLLDKAVIAYHNCKR 767

Query: 502 -QAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
            Q  L ++VV++  L+++L +   +E A  +L +
Sbjct: 768 QQLELNSNVVMH--LLESLIRKDEIEVAKLILKD 799



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 178/380 (46%), Gaps = 44/380 (11%)

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           T ++LL    +GG      ++F  M    + +D+ +++  + A+ +  +   A   +  M
Sbjct: 283 TMDALL----KGGKARECLDMFLSMPSNEVKRDVASWSIYITALGRLERYSEAERSLIWM 338

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL-GIGLDRVSYNTVLSIYAKLGR 419
             ++I PN+ TYS +I+   K G    AL+ F  M  +  I  + V+YN V+ I ++  R
Sbjct: 339 REEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSRIDNIAPNTVTYNAVIKIVSRCKR 398

Query: 420 -----FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
                   A+ + +EM + G   D VTY  L+  + K+ + +   ++F++MK   V PN 
Sbjct: 399 NDCGGITRAMSLLREMATKGCIPDVVTYATLIDAFSKRMEPERALKLFQEMKEANVKPNN 458

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
             YS+LI  + + G  + A+ IF E     +  DV  ++ALID   K   V+ A  + D 
Sbjct: 459 YCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIYDR 518

Query: 535 MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEA 594
           M K  I+P+ +T+N++I A G++  +   ++     +G   E   L       D+     
Sbjct: 519 MRKLQIQPDRITFNALISASGKAKNSIRALE----AMGDMTEIYGLTP-----DR----- 564

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
             + N +I   G     K+G   K             VF++M    I+P  VTF+A++  
Sbjct: 565 -HSYNALIDACG-----KSGDFTKA----------YEVFEEMRTKGIRPCTVTFNALIYG 608

Query: 655 CSRCN----SFEDASMLLEE 670
            SR +    SF+   ++L+E
Sbjct: 609 ASRSHDLAASFKIVDLMLQE 628



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 162/350 (46%), Gaps = 59/350 (16%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           ++N  +    K G+  E L +   M S+ +++D  +++  +   G+  +Y E  R    M
Sbjct: 279 NWNYTMDALLKGGKARECLDMFLSMPSNEVKRDVASWSIYITALGRLERYSEAERSLIWM 338

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA-GLKADVVLYSALIDAL--CKN 522
           + + + PN+ TYS LI+   KGGL   A+  FR   +   +  + V Y+A+I  +  CK 
Sbjct: 339 REEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSRIDNIAPNTVTYNAVIKIVSRCKR 398

Query: 523 ---GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
              G +  A+SLL EM  +G  P+VVTY ++IDAF +    E  +      L ++ + AN
Sbjct: 399 NDCGGITRAMSLLREMATKGCIPDVVTYATLIDAFSKRMEPERAL-----KLFQEMKEAN 453

Query: 580 -----------LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA------------GQG 616
                      + A C         AG  + + + +F ++  E+             G G
Sbjct: 454 VKPNNYCYSSLISAFC--------RAGYVE-RALAIFEEMTHERIVPDVFAFNALIDGFG 504

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
           K      +++     ++ +M KL+I+P+ +TF+A+++A  +  +   A   + ++     
Sbjct: 505 KL-----RQVDKAFEIYDRMRKLQIQPDRITFNALISASGKAKNSIRALEAMGDM----T 555

Query: 677 QVYGV-----AHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
           ++YG+     ++  L+    +   + +A  +F+E++       +  +NAL
Sbjct: 556 EIYGLTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNAL 605


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 138/547 (25%), Positives = 243/547 (44%), Gaps = 91/547 (16%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +I +  R+ + D+A +++           +Y+F+ LI  +        ++S F  + 
Sbjct: 109 CNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168

Query: 256 RYNLKPNLVTYNAVI------DACGKGGVDFKHVVE--------IFDDMLRNGVQPDRIT 301
           +   +P++VT+N ++      D   +    F ++VE        +FD M+  G+ P  IT
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228

Query: 302 FNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA-- 358
           FN+L+  +C  G + EAA  L N+MV +G+  D+ TY T+++ +CK      A  +++  
Sbjct: 229 FNTLINGLCLEGRVLEAAA-LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287

Query: 359 ---------------------------------EMPAKNISPNVVTYSTMIDGYAKAGRL 385
                                            EM  K I+PNV TY+ MIDG+   GR 
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            DA  +  +M    I  D +++N ++S   K G+  EA  +C EM    I  D VTYN++
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G+ K  ++D+ + MF+ M     SP+++T++T+IDVY +     E MQ+ RE  + GL
Sbjct: 408 IYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
            A+   Y+ LI   C+   + +A  L  EM   G+ P+ +T N ++  F  +   E  ++
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523

Query: 566 DVER------DLGKQKESANLDAMCSQDDKD-------------VQEAGRTDNQIIKVF- 605
             E       DL     +  +  MC     D             V+   +T N +I  F 
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583

Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
           G+     A                  +F KM     +P+  T++ ++  C +    + + 
Sbjct: 584 GKSAISDANV----------------LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627

Query: 666 MLLEELR 672
            L+ E+R
Sbjct: 628 ELISEMR 634



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 181/358 (50%), Gaps = 5/358 (1%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + SA+I  L + G    A+ +F   L +G    V+ ++ +I  +   G   +A  +   M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               + P+++T+NA+I A  K G  F+   ++ D+ML   + PD +T+NS++    +   
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           ++ A+++F+ M       D+ T+NT++D  C+  ++D   +++ E+  + +  N  TY+T
Sbjct: 417 FDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I G+ +   L+ A ++F EM   G+  D ++ N +L  + +  + EEAL + + ++ S 
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I  D V YN ++ G  K  K DE   +F  +    V P++ TY+ +I  +       +A 
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            +F + K  G + D   Y+ LI    K G ++ ++ L+ EM   G   +  T   + D
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 183/396 (46%), Gaps = 36/396 (9%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           ++ FD M+R+      +  N ++ V  R    + A +L+ +M  R I  +I+++N L+  
Sbjct: 91  IDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKC 150

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C   ++  +     ++      P+VVT++T++ G     R+ +AL +F  M   G    
Sbjct: 151 FCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG---- 206

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
                           F EA+ +  +M   G+    +T+N L+ G   +G+  E   +  
Sbjct: 207 ----------------FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M    +  +++TY T+++   K G  K A+ +  + ++  +K DVV+YSA+ID LCK+G
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIID---AFGR-SATTECTVDDVERDLGKQKESAN 579
               A  L  EM ++GI PNV TYN +ID   +FGR S       D +ER++     + N
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIK--VFGQLVAEKAGQGK--KENRCRQEILCILGVFQK 635
                S  +  + EA +  ++++   +F   V   +      K NR            + 
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA--------KH 422

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           M  L   P+VVTF+ I++   R    ++   LL E+
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 157/336 (46%), Gaps = 5/336 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI      G+   A+ +    +       V  F+ALISA  + G   EA  + + M  
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P+ VTYN++I    K    F     +FD M      PD +TFN+++ V  R    +
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHN-RFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVD 449

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               L  E+  RG+  +  TYNTL+   C+   ++ A ++  EM +  + P+ +T + ++
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+ +  +L++AL +F  ++   I LD V+YN ++    K  + +EA  +   +   G+ 
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  TYN ++ G+  +    +   +F +MK +   P+  TY+TLI    K G   +++++
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
             E +  G   D      + D +    L +S   +L
Sbjct: 630 ISEMRSNGFSGDAFTIKMVADLITDGRLDKSFSDML 665


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 189/362 (52%), Gaps = 5/362 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R GK D + +     L  G       ++ +I  Y R G  ++A    N M   + KP+
Sbjct: 239 LCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPD 298

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           L T N ++   C +G +D  + +++F+  +  G   D +T+N++++   + G +E A +L
Sbjct: 299 LFTCNILLRGLCTEGMLD--NALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDL 356

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKG-AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
             EM  + +  D +TYN +L A+     Q++ AF+   +M  K+  P++ T + ++ G  
Sbjct: 357 LAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLC 416

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES-SGIRKDA 439
             G LD+AL +F+     G  +D V+YNT++S   K GRFEEA  +  EME  +G+  D 
Sbjct: 417 TEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQ 476

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
            TYN ++ GY ++G+ ++  +   +M      P+L T + L+    + G+  +A+++F  
Sbjct: 477 TTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNT 536

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
           +   G   D V Y+ +I  LCK G  E A  LL EM ++ + P+  TYN+I+ A   +  
Sbjct: 537 WISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGR 596

Query: 560 TE 561
            E
Sbjct: 597 ME 598



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 173/354 (48%), Gaps = 29/354 (8%)

Query: 235 ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC----GKGGVDFKHVVEIFDDM 290
           I AY        A  +FN MKR +LKPNL+T N +I+A      K  V       IF ++
Sbjct: 142 IGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKA--IFTNV 199

Query: 291 LRNGVQ-------------------PDRITFNSLLAVC--SRGGLWEAARNLFNEMVHRG 329
           ++ GV+                   PD  ++N++L V    R G  + + +  NE++  G
Sbjct: 200 IKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESG 259

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +     TYNT++   C+  Q++ AF+   +M  K+  P++ T + ++ G    G LD+AL
Sbjct: 260 LVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNAL 319

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            +F+     G  +D V+YNT++S   K GRFEEA  +  EME   +  D  TYNA+L   
Sbjct: 320 KLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCAL 379

Query: 450 GK-QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
              +G+ ++  +   +M      P+L T + L+      G+   A+++F  +   G   D
Sbjct: 380 ADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 439

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEM-TKEGIRPNVVTYNSIIDAFGRSATTE 561
            V Y+ +I  LCK G  E A  LL EM  K G+ P+  TYN+II  + R    E
Sbjct: 440 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVE 493



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 186/401 (46%), Gaps = 47/401 (11%)

Query: 238 YGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA---CGKGGVDFKHVVEIFDDMLRNG 294
           +G      EAI +   MK ++  P+  +YN ++D    C  G  D    ++  +++L +G
Sbjct: 202 FGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTD--QSIDKLNELLESG 259

Query: 295 VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAF 354
           + P +IT+N+++    R G  E A    N+MV +    D+FT N LL  +C    +D A 
Sbjct: 260 LVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNAL 319

Query: 355 EIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY 414
           ++     +K  + + VTY+T+I G  K GR ++A ++ +EM+   +G D  +YN +L   
Sbjct: 320 KLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCAL 379

Query: 415 AKL-GRFEEA---------------LLVCKEME--------------------SSGIRKD 438
           A   G+ E+A               L  C  +                     S G   D
Sbjct: 380 ADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 439

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMK-ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           AVTYN ++ G  K+G+++E   +  +M+  + + P+  TY+T+I  Y + G  ++A Q  
Sbjct: 440 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFR 499

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            +  +   K D+   + L+  LC+ G++  A+ L +    +G   + VTYN+II    + 
Sbjct: 500 NKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKE 559

Query: 558 ATTECTVDDV----ERDLGKQKESANLDAMCSQDDKDVQEA 594
              E   D +    E+ LG    + N   +C+  D    EA
Sbjct: 560 GRFEEAFDLLAEMKEKKLGPDCYTYN-AILCALADAGRMEA 599



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 159/325 (48%), Gaps = 3/325 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G+V+ A       + + +   ++  + L+      G    A+ +FN+        + V
Sbjct: 276 REGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAV 335

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFN 323
           TYN +I    K G  F+   ++  +M    + PD  T+N++L A+    G  E A    N
Sbjct: 336 TYNTIISGLCKEG-RFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRN 394

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           +MV +    D+FT N LL  +C    +D A ++     +K  + + VTY+T+I G  K G
Sbjct: 395 KMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEG 454

Query: 384 RLDDALNMFSEMKFL-GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           R ++A ++ +EM+   G+  D+ +YNT++  Y + G+ E+A     +M     + D  T 
Sbjct: 455 RFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTC 514

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           N LL G  ++G   +  ++F    +   + + +TY+T+I    K G ++EA  +  E K+
Sbjct: 515 NILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKE 574

Query: 503 AGLKADVVLYSALIDALCKNGLVES 527
             L  D   Y+A++ AL   G +E+
Sbjct: 575 KKLGPDCYTYNAILCALADAGRMEA 599



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/475 (22%), Positives = 203/475 (42%), Gaps = 55/475 (11%)

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +FN M    +  ++ T NTL++A+ +              P+K   P+V     +  
Sbjct: 154 AAQIFNRMKRLHLKPNLLTRNTLINALVR-------------YPSK---PSVCLSKAIFT 197

Query: 378 GYAKAG---RLDDALNMFSEMKFLGIGLDRVSYNTVLSIY--AKLGRFEEALLVCKEMES 432
              K G   +L +A+ +  +MK      D  SYNT+L +    + G+ ++++    E+  
Sbjct: 198 NVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLE 257

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           SG+    +TYN ++ GY ++G+ ++  +   +M      P+L T + L+      G+   
Sbjct: 258 SGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDN 317

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A+++F  +   G   D V Y+ +I  LCK G  E A  LL EM ++ + P+  TYN+I+ 
Sbjct: 318 ALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILC 377

Query: 553 AFGRSATTECTVDD--------VERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQII 602
           A    A  E  V+         VE+       + N  L  +C++        G  DN + 
Sbjct: 378 AL---ADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTE--------GMLDNAL- 425

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL--------KIKPNVVTFSAILNA 654
           K+F   +++               LC  G F++   L         + P+  T++ I+  
Sbjct: 426 KLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILG 485

Query: 655 CSRCNSFEDASMLLEEL--RLFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSST 711
             R    E A     ++  + F   ++   + LL G  R+ + V+AL LF+       + 
Sbjct: 486 YCREGQVEKAFQFRNKMVEKSFKPDLF-TCNILLRGLCREGMLVKALKLFNTWISKGKAI 544

Query: 712 ASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARA 766
            +  YN +   L   G+   A  ++ E K +++  + ++ + +   L  +G   A
Sbjct: 545 DAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRMEA 599


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 205/400 (51%), Gaps = 8/400 (2%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++I  L  +GK      + +  +  G   +VY F+ LI    ++G   EA  +F+ M   
Sbjct: 225 SLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNR 284

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             +PN+VT  A++   C KG VD     E+FD +   G + D  T+N  +   C  G + 
Sbjct: 285 GYEPNIVTCTALMGGYCLKGNVDMAR--ELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVR 342

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +A R +F+EM   G+  +I TYN+L+D +CK  ++  A+EI+  M    ++P++VT   +
Sbjct: 343 DAVR-VFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCIL 401

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +DG  K+ RLD A+ +F+++   G+  D  SY  ++       R  EA+ + ++M    +
Sbjct: 402 LDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNL 461

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
               VTY+ L+ G  + G+     R+  +M      P+ +TYS L+D   K     EA+ 
Sbjct: 462 VPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVF 521

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F +  + GL+ DV+ Y+ +ID  CK+  ++ A++L  EM  + + P++VTY  + +A  
Sbjct: 522 LFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVF 581

Query: 556 RSATT--ECTVDDVERDLGKQKESAN-LDAMCSQDDKDVQ 592
           +S +   E    +V RD+         L A+C  +  D +
Sbjct: 582 KSGSNSYEWKFVNVIRDINPPPRVLKYLAALCKSEHLDYK 621



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 207/441 (46%), Gaps = 37/441 (8%)

Query: 225 GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHV 283
           GN V  +S +I    R+G+  E    +N M    + PN  TY ++I   CG G   F   
Sbjct: 183 GNVV-MYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVG--KFLEG 239

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
             + D+M+R G+      F  L+    + G+   AR +F+EMV+RG + +I T   L+  
Sbjct: 240 FGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGG 299

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C    +D+A E+   +       +V TY+  I GY K GR+ DA+ +F EM   G+  +
Sbjct: 300 YCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPN 359

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V+YN+++    K G    A  + K M  SG+  D VT   LL G  K  + D+   +F 
Sbjct: 360 IVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFN 419

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           Q+    ++P++ +Y+ LI          EAM + R+     L   +V YS LID LC++G
Sbjct: 420 QLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSG 479

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
            + +A  LL+EM  +G  P+ +TY+ ++DA  +    +  V    + + +  E    D M
Sbjct: 480 RISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEP---DVM 536

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
           C                 I + G   +E+  +              + +F++MH   + P
Sbjct: 537 CYT---------------IMIDGYCKSERIDEA-------------INLFREMHMKNLVP 568

Query: 644 NVVTFSAILNAC--SRCNSFE 662
           ++VT++ + NA   S  NS+E
Sbjct: 569 DIVTYTILFNAVFKSGSNSYE 589



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 174/407 (42%), Gaps = 59/407 (14%)

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           ++F +++ RG   D    NT+L  +C    +  A E   E+     S N V+Y  +I+G 
Sbjct: 93  SIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGL 152

Query: 380 AKAGRLDDALNM-------------------------------------------FSEMK 396
            + GR+++A+N+                                           ++EM 
Sbjct: 153 CENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMM 212

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  +  +Y +++     +G+F E   +  EM   G+      +  L+ G  K G   
Sbjct: 213 GNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLV 272

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E R MF++M      PN++T + L+  Y   G    A ++F    + G K DV  Y+  I
Sbjct: 273 EAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFI 332

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
              CK G V  AV + DEM +EG+ PN+VTYNS+ID   ++        ++ + + +   
Sbjct: 333 HGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVS-GAWEIVKTMHRSGL 391

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG----------QGKKENRCRQEI 626
           + ++   C   D  + ++ R D Q I +F QLV                G   +R   E 
Sbjct: 392 TPDIVTCCILLD-GLCKSKRLD-QAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEA 449

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
           + +L   + MH   + P++VT+S +++   R     +A  LL E+ +
Sbjct: 450 MNLL---RDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHV 493



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 75/341 (21%), Positives = 136/341 (39%), Gaps = 57/341 (16%)

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G +  + ++F ++   G GLD V+ NTVL      G   +AL    E+ ++G   + V+Y
Sbjct: 86  GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145

Query: 443 NALLGGYGKQGKYDE---VRRM-------------------------------------- 461
             L+ G  + G+ +E   + RM                                      
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGF 205

Query: 462 --FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
             + +M  + V PN  TY +LI      G + E   +  E  + GL   V +++ LID L
Sbjct: 206 EFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGL 265

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKES 577
           CKNG++  A  + DEM   G  PN+VT  +++  +      +   +  D   + G +++ 
Sbjct: 266 CKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDV 325

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG------ 631
              +       K     GR  +  ++VF ++  E             + LC  G      
Sbjct: 326 WTYNVFIHGYCK----VGRVRDA-VRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380

Query: 632 -VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            + + MH+  + P++VT   +L+   +    + A +L  +L
Sbjct: 381 EIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQL 421



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 6/156 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L R G++  A  +      +G       +S L+ A  +  +  EA+ +FN M +
Sbjct: 469 SCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIK 528

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             L+P+++ Y  +ID  C    +D    + +F +M    + PD +T+  L     + G  
Sbjct: 529 RGLEPDVMCYTIMIDGYCKSERID--EAINLFREMHMKNLVPDIVTYTILFNAVFKSGSN 586

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
                  N +        +  Y   L A+CK   +D
Sbjct: 587 SYEWKFVNVIRDINPPPRVLKY---LAALCKSEHLD 619


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 222/493 (45%), Gaps = 27/493 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L R  ++D A ++ E A+  G       ++  I    ++    +A  +   M  
Sbjct: 11  TVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDE 70

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P  VTY A++D   K G      + + + M+  G  P   T+  ++   S+ G  E
Sbjct: 71  KKCLPTTVTYTALVDGLLKAG-RLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVE 129

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK----NISPNVVTY 372
            AR +F +M+  G   D F Y  L+  +CK  + + A+ +  E  A+       P+VVTY
Sbjct: 130 EARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTY 189

Query: 373 STMIDGYAKAGRLDDALNMF-SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           +++IDG  KAGR+ +A  +F  E    G   D V+Y +++    KLGR EE      EM 
Sbjct: 190 TSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 249

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           + G   DAVTY AL+ G+ K     +  R++ QM       + +TY+ ++D   K G   
Sbjct: 250 NRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVA 309

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA   F   ++ G  A VV YSAL+D  C  G V +AV L   M   G  PN+V+YN II
Sbjct: 310 EAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIII 369

Query: 552 DAFGRSATTECTVDDVERDLGKQ------KESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
               R+          E+ L ++        +A L  +C + D        T +  +++F
Sbjct: 370 RGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLD--------TVSDGVELF 421

Query: 606 GQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRC 658
             +V++             + +C  G       +F++M    + P+VV F+ ++      
Sbjct: 422 ESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIA 481

Query: 659 NSFEDASMLLEEL 671
              ++A  +  EL
Sbjct: 482 GRVDEALEVFREL 494



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 212/459 (46%), Gaps = 16/459 (3%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           T   ++AL+    ++G   EA++V   M      P L TY  VID   K G   +    I
Sbjct: 76  TTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAG-RVEEARRI 134

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV----HRGIDQDIFTYNTLLD 342
           F DML NG +PD   + +L+    + G  E A  L+ E      H     D+ TY +L+D
Sbjct: 135 FVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLID 194

Query: 343 AICKGAQMDLAFEIMA-EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
            +CK  ++  A ++   E   +   P+ VTY+++IDG  K GR+++    F EM+  G  
Sbjct: 195 GLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYE 254

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D V+Y  ++  + K     +A  V ++M  SG     VTYN +L G  K G+  E    
Sbjct: 255 PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYAT 314

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F  M+       ++TYS L+D +   G    A+++FR     G + ++V Y+ +I  LC+
Sbjct: 315 FLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCR 374

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
            G +  A    +++ +  + P+V T+N+ +    +   T     ++   +  Q  S NL 
Sbjct: 375 AGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLH 434

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQ 634
           +     D   +  G      +++F ++V+                LCI G       VF+
Sbjct: 435 SYSILMDGICRAGGL--EVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFR 492

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
           ++ + +  P+  ++ ++L+  SRC   E+A +L   ++L
Sbjct: 493 ELER-RSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKL 530



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 140/266 (52%), Gaps = 5/266 (1%)

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           PD + F  ++    R    + A ++    V  G + D  TYN  +D +CK  ++D AF++
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           + +M  K   P  VTY+ ++DG  KAGRLD+A+ +  +M   G      +Y  V+   +K
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD----CVSP 472
            GR EEA  +  +M  +G R DA  Y AL+ G  K GK +E   ++++  A        P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIF-REFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           +++TY++LID   K G   EA Q+F  E  + G   D V Y+++ID LCK G VE     
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRS 557
             EM   G  P+ VTY ++ID F ++
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKA 270



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 212/463 (45%), Gaps = 53/463 (11%)

Query: 145 ILKKFEFKLC--GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +LKK + K C      YT L+  L   G   +A+      V  E+  +   K  + +I  
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMV--EKGNSPTLKTYTVVIDG 121

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF---NSMKRY-N 258
           L + G+V+ A+ IF   L  G     + ++ALI    +SG  +EA +++   N+ K +  
Sbjct: 122 LSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHAT 181

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDD-MLRNGVQPDRITFNSLL-AVCSRGGLWE 316
             P++VTY ++ID   K G       ++FDD  +  G  PD +T+ S++  +C  G + E
Sbjct: 182 AVPDVVTYTSLIDGLCKAG-RILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE 240

Query: 317 AARNLFNEMVHRGIDQD-----------------------------------IFTYNTLL 341
                F+EM +RG + D                                     TYN +L
Sbjct: 241 GCER-FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIIL 299

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           D +CK  ++  A+     M  +     VVTYS ++DG+   G +  A+ +F  M   G  
Sbjct: 300 DGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCE 359

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR-- 459
            + VSYN ++    + G+  +A    +++    +  D  T+NA L G  +  + D V   
Sbjct: 360 PNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQ--RLDTVSDG 417

Query: 460 -RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +FE M +   SPNL +YS L+D   + G  + A++IFRE    G+  DVV+++ LI  
Sbjct: 418 VELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRW 477

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           LC  G V+ A+ +  E+ +    P+  +Y S++D   R    E
Sbjct: 478 LCIAGRVDEALEVFRELERRSA-PDAWSYWSLLDGLSRCERME 519



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 145/545 (26%), Positives = 244/545 (44%), Gaps = 51/545 (9%)

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           P++V +  VI+  C +  +D      + +  +R G +PD +T+N  +    +    + A 
Sbjct: 5   PDMVAFTVVINGLCREKRLD--EAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            L  +M  +       TY  L+D + K  ++D A  ++ +M  K  SP + TY+ +IDG 
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES----SGI 435
           +KAGR+++A  +F +M   G   D   Y  ++    K G+ EEA  + KE  +    +  
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD-CVSPNLLTYSTLIDVYSKGGLYKEAM 494
             D VTY +L+ G  K G+  E R++F+    +    P+ +TY+++ID   K G  +E  
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + F E +  G + D V Y+ALID   K  ++  A  +  +M + G   + VTYN I+D  
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 555 ---GRSATTECTVDDVERD---LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
              GR A    T   +E           SA +D  CS+ +          +  +++F ++
Sbjct: 303 CKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNV---------SAAVELFRRM 353

Query: 609 VAEKAGQGKKENRCRQEI----LCILG-------VFQKMHKLKIKPNVVTFSAILNA-CS 656
           +     +G + N     I    LC  G        F+K+ + ++ P+V TF+A L+  C 
Sbjct: 354 L----DRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQ 409

Query: 657 RCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASA 714
           R ++  D   L E +          ++ +LM    R      AL +F E+     +    
Sbjct: 410 RLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVV 469

Query: 715 FYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSE-SCLDLHLMSSGAARA--MVHAW 771
            +N L   L   G+   A  V  E +RR    + WS  S LD      G +R   M  A 
Sbjct: 470 VFNTLIRWLCIAGRVDEALEVFRELERRSA-PDAWSYWSLLD------GLSRCERMEEAR 522

Query: 772 LLNIH 776
           LL+ H
Sbjct: 523 LLSFH 527



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 141/313 (45%), Gaps = 40/313 (12%)

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           SP++V ++ +I+G  +  RLD+A ++       G   D V+YN  +    K  R ++A  
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + K+M+        VTY AL+ G  K G+ DE   + EQM     SP L TY+ +ID  S
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE----GIR 541
           K G  +EA +IF +    G + D  +Y+ALI  LCK+G  E A +L  E           
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
           P+VVTY S+ID                   G  K    L+A    DD+ V+     D   
Sbjct: 184 PDVVTYTSLID-------------------GLCKAGRILEARQVFDDEAVERGFIPDAV- 223

Query: 602 IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
              +  ++      G+ E  C +        F +M     +P+ VT++A+++       F
Sbjct: 224 --TYTSIIDGLCKLGRVEEGCER--------FHEMRNRGYEPDAVTYAALIDG------F 267

Query: 662 EDASMLLEELRLF 674
             A M+ +  R++
Sbjct: 268 MKAKMIPKAHRVY 280



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 5/172 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  ++R L   G+ +KA   F   ++R     D     + +  +  RL  V     +FE+
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFEKLLQRR-LCPDVYTFNAFLHGLCQRLDTVSDGVELFES 423

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID-ACGKGG 277
            +++G    ++++S L+    R+G  + A+ +F  M    + P++V +N +I   C  G 
Sbjct: 424 MVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGR 483

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
           VD    +E+F ++ R    PD  ++ SLL   SR    E AR L   M  +G
Sbjct: 484 VD--EALEVFRELERRSA-PDAWSYWSLLDGLSRCERMEEARLLSFHMKLQG 532


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 237/509 (46%), Gaps = 52/509 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + M++   +LG + +A+  F   L    G  ++ +++L+  Y R+   + A  VF  M R
Sbjct: 193 NTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPR 252

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            N     V+Y  +I    + G      +E +  M  +G  P   T+  L+      G   
Sbjct: 253 RNA----VSYTNLIHGLCEAG-KLHEALEFWARMREDGCFPTVRTYTVLVCALCESGREL 307

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +LF EM  RG + +++TY  L+D +CK  +MD A +++ EM  K ++P+VV ++ +I
Sbjct: 308 EALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALI 367

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             Y K G ++DA+ +   M+   +  +  +YN ++  + +    + A+ +  +M  S + 
Sbjct: 368 GSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLS 427

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D VTYN L+ G  + G  D   R+F  M  D  SP+  T++  +    + G   EA QI
Sbjct: 428 PDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQI 487

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
               K+  +KA+   Y+ALID  CK G +E A SL   M  E   PN +T+N +ID    
Sbjct: 488 LESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMID---- 543

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDK---DVQEAGRTDNQII-KVFGQLVAEK 612
                          G +KE    DAM   +D    DV+    T N ++ +V  +   ++
Sbjct: 544 ---------------GLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDR 588

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           A +                +  ++     +PNVVT++A + A       E+A  ++ +++
Sbjct: 589 ANE----------------ILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIK 632

Query: 673 ----LFDNQVYGV---AHGLLMGYRDNIW 694
               L D+ +Y +   A+G  MG  D+ +
Sbjct: 633 NEGVLLDSFIYNLLINAYG-CMGLLDSAF 660



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 250/523 (47%), Gaps = 25/523 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L   G   +A+    F   RE          + +I  L + G++D A  +   
Sbjct: 293 YTVLVCALCESGRELEALS--LFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNE 350

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG-G 277
            + +G   +V  F+ALI +Y + G  ++A+ V   M+   + PN+ TYN +I  CG   G
Sbjct: 351 MVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELI--CGFCRG 408

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
                 + + + M+ + + PD +T+N+L+      G+ ++A  LF  M+  G   D +T+
Sbjct: 409 KSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTF 468

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N  +  +C+  ++  A +I+  +  K++  N   Y+ +IDGY KAG+++ A ++F  M  
Sbjct: 469 NAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLA 528

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
                + +++N ++    K G+ ++A+L+ ++M    ++    TYN L+    K+  +D 
Sbjct: 529 EECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDR 588

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +  ++ +    PN++TY+  I  Y   G  +EA ++  + K  G+  D  +Y+ LI+
Sbjct: 589 ANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLIN 648

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
           A    GL++SA  +L  M   G  P+ +TY+ ++    +    E    +    +G     
Sbjct: 649 AYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILM----KHLVIEKHKKEGSNPVGLDVSL 704

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI--LCILG---- 631
            N+    S D+ D+    + D  I  V  + +AE  G     N   + I  LC +G    
Sbjct: 705 TNI----SVDNTDIW--SKIDFGITTVLFEKMAE-CGCVPNLNTYSKLINGLCKVGRLNV 757

Query: 632 ---VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              ++  M +  I P+ +  +++L++C +   F +A  LL+ +
Sbjct: 758 AFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSM 800



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 123/517 (23%), Positives = 229/517 (44%), Gaps = 5/517 (0%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
           A  YT L+  L   G+  +A++   +A  RE+      +  + ++  L   G+   A ++
Sbjct: 255 AVSYTNLIHGLCEAGKLHEALE--FWARMREDGCFPTVRTYTVLVCALCESGRELEALSL 312

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
           F      G    VY ++ LI    + G   EA+ + N M    + P++V +NA+I +  K
Sbjct: 313 FGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCK 372

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            G+  +  V +   M    V P+  T+N L+    RG   + A  L N+MV   +  D+ 
Sbjct: 373 RGM-MEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVV 431

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYNTL+  +C+   +D A  +   M     SP+  T++  +    + GR+ +A  +   +
Sbjct: 432 TYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESL 491

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           K   +  +  +Y  ++  Y K G+ E A  + K M +     +++T+N ++ G  K+GK 
Sbjct: 492 KEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKV 551

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            +   + E M    V P L TY+ L++   K   +  A +I      +G + +VV Y+A 
Sbjct: 552 QDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAF 611

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           I A C  G +E A  ++ ++  EG+  +   YN +I+A+G     +     + R  G   
Sbjct: 612 IKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGC 671

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
           E + L          +++  +  +  + +   L           ++    I  +L  F+K
Sbjct: 672 EPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVL--FEK 729

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           M +    PN+ T+S ++N   +      A  L   +R
Sbjct: 730 MAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMR 766



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 175/384 (45%), Gaps = 30/384 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L  +G VD A  +F   + +G+    + F+A +    R G   EA  +  S+K 
Sbjct: 434 NTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKE 493

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            ++K N   Y A+ID   K G   +H   +F  ML     P+ ITFN ++    + G  +
Sbjct: 494 KHVKANEHAYTALIDGYCKAG-KIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQ 552

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L  +M    +   + TYN L++ + K    D A EI+  + +    PNVVTY+  I
Sbjct: 553 DAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFI 612

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             Y   GRL++A  M  ++K  G+ LD   YN +++ Y  +G  + A  V + M  +G  
Sbjct: 613 KAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCE 672

Query: 437 KDAVTYNALLG-----GYGKQGK------------------------YDEVRRMFEQMKA 467
              +TY+ L+       + K+G                         +     +FE+M  
Sbjct: 673 PSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAE 732

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
               PNL TYS LI+   K G    A  ++   ++ G+    +++++L+ + CK G+   
Sbjct: 733 CGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGE 792

Query: 528 AVSLLDEMTKEGIRPNVVTYNSII 551
           AV+LLD M +     ++ +Y  +I
Sbjct: 793 AVTLLDSMMECSHLAHLESYKLLI 816



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 201/451 (44%), Gaps = 66/451 (14%)

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLR---NGVQPDRITFNSLLAVCSRGGLW 315
            K +L +YN ++    +  +    ++ ++ +ML    N V P+ IT N++L    + G  
Sbjct: 147 FKLSLTSYNRLLMCLSRFSM-VDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNM 205

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN----------- 364
             AR  F  ++      D+FTY +L+   C+   ++ A  +   MP +N           
Sbjct: 206 AVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGL 265

Query: 365 --------------------ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
                                 P V TY+ ++    ++GR  +AL++F EM+  G   + 
Sbjct: 266 CEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNV 325

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +Y  ++    K GR +EAL +  EM   G+    V +NAL+G Y K+G  ++   +   
Sbjct: 326 YTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGL 385

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M++  V PN+ TY+ LI  + +G     AM +  +  ++ L  DVV Y+ LI  LC+ G+
Sbjct: 386 MESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGV 445

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           V+SA  L   M ++G  P+  T+N+ +    R              +G+  E+       
Sbjct: 446 VDSASRLFRLMIRDGFSPDQWTFNAFMVCLCR--------------MGRVGEA------- 484

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
            Q  + ++E     N+    +  L+      GK E+           +F++M   +  PN
Sbjct: 485 HQILESLKEKHVKANE--HAYTALIDGYCKAGKIEHAA--------SLFKRMLAEECLPN 534

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELRLFD 675
            +TF+ +++   +    +DA +L+E++  FD
Sbjct: 535 SITFNVMIDGLRKEGKVQDAMLLVEDMAKFD 565



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 199/441 (45%), Gaps = 52/441 (11%)

Query: 157 DDYTF-----LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDL 211
           D +TF      L  +G  GE  + ++    ++K +  K ++    +A+I    + GK++ 
Sbjct: 464 DQWTFNAFMVCLCRMGRVGEAHQILE----SLKEKHVKANEHAY-TALIDGYCKAGKIEH 518

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A ++F+  L E        F+ +I    + G  Q+A+ +   M ++++KP L TYN +++
Sbjct: 519 AASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVE 578

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGI 330
              K   DF    EI + ++ +G QP+ +T+ + + A CS+G L E A  +  ++ + G+
Sbjct: 579 EVLKE-YDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRL-EEAEEMVIKIKNEGV 636

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM-----IDGYAKAGR- 384
             D F YN L++A      +D AF ++  M      P+ +TYS +     I+ + K G  
Sbjct: 637 LLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSN 696

Query: 385 ---LDDALN--------------------MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
              LD +L                     +F +M   G   +  +Y+ +++   K+GR  
Sbjct: 697 PVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLN 756

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
            A  +   M   GI    + +N+LL    K G + E   + + M       +L +Y  LI
Sbjct: 757 VAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLI 816

Query: 482 DVYSKGGLYKE-----AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
                 GL+++     A  +F    + G   D V +  LID L K G V+    LL+ M 
Sbjct: 817 -----CGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLME 871

Query: 537 KEGIRPNVVTYNSIIDAFGRS 557
           K G R +  TY+ ++    R+
Sbjct: 872 KNGCRLHPETYSMLMQELNRA 892



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/399 (21%), Positives = 153/399 (38%), Gaps = 81/399 (20%)

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
           H      + T+++LL  + +   +  A  +   M     SP+  T+   +       R++
Sbjct: 79  HHNFPHSLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATFLLNL-----LRRMN 133

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM---ESSGIRKDAVTYN 443
            A         L   L   SYN +L   ++    +E + + KEM     + +  + +T N
Sbjct: 134 TAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLN 193

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK----------------- 486
            +L  Y K G     R  F ++      P+L TY++L+  Y +                 
Sbjct: 194 TMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR 253

Query: 487 --------------GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
                          G   EA++ +   ++ G    V  Y+ L+ ALC++G    A+SL 
Sbjct: 254 NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLF 313

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE----------SANLDA 582
            EM + G  PNV TY  +ID   +    E  +D+  + L +  E          +A + +
Sbjct: 314 GEMRERGCEPNVYTYTVLIDYLCK----EGRMDEALKMLNEMVEKGVAPSVVPFNALIGS 369

Query: 583 MCSQ-------------DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI 629
            C +             + K V    RT N++I  F         +GK  +R        
Sbjct: 370 YCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGF--------CRGKSMDR-------A 414

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
           + +  KM + K+ P+VVT++ +++        + AS L 
Sbjct: 415 MALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLF 453



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/376 (21%), Positives = 148/376 (39%), Gaps = 43/376 (11%)

Query: 111 GRPKIAMSTRHSVVAEEALHHVTAF------------ARDDVSLGDILKKFEFKLCGADD 158
           G+ + A S    ++AEE L +   F             +D + L + + KF+ K      
Sbjct: 514 GKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKP-TLHT 572

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+ E+    ++ +A +     +    + N      +A I      G+++ A+ +   
Sbjct: 573 YNILVEEVLKEYDFDRANEILNRLISSGYQPNVVT--YTAFIKAYCSQGRLEEAEEMVIK 630

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA-----VIDAC 273
             NEG     + ++ LI+AYG  G    A  V   M     +P+ +TY+      VI+  
Sbjct: 631 IKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKH 690

Query: 274 GKGG-----------------------VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCS 310
            K G                       +DF     +F+ M   G  P+  T++ L+    
Sbjct: 691 KKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLC 750

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           + G    A +L++ M   GI      +N+LL + CK      A  ++  M   +   ++ 
Sbjct: 751 KVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLE 810

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           +Y  +I G  +    + A  +F  +   G   D V++  ++   AK G  ++   +   M
Sbjct: 811 SYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLM 870

Query: 431 ESSGIRKDAVTYNALL 446
           E +G R    TY+ L+
Sbjct: 871 EKNGCRLHPETYSMLM 886


>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 457

 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 194/369 (52%), Gaps = 2/369 (0%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           K  +  IS + +  ++  A+ +    +  G    +  ++ LI  Y R      A ++ N 
Sbjct: 8   KFMNITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNR 67

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           MK   + P++V+YN++     +  +  +  +++FD+ML++G++PD  ++N L+    R G
Sbjct: 68  MKEAGINPDVVSYNSLSSGAVRKCL-LQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLG 126

Query: 314 LWEAARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
             E A  +F ++  RG I   + +YN +++ +CK   ++ A  +   +  +   P V+TY
Sbjct: 127 KPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTY 186

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + MI+G  KA RL DA  + +E    G   + ++Y TV+    + GR E+ L +  EM  
Sbjct: 187 NAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRR 246

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G   D   Y  ++    K G+ +E   + E+M ++ + P+L +Y+T+I+++ + G + E
Sbjct: 247 KGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDE 306

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A+++  E ++ G+K D   ++ +I  LCK+G  E A   LD M   G   N+V +NSI+D
Sbjct: 307 ALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILD 366

Query: 553 AFGRSATTE 561
             G++   +
Sbjct: 367 CLGKAGDID 375



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 174/346 (50%), Gaps = 6/346 (1%)

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVTYNAVIDA 272
           ++F+  L  G    V++++ L+  Y R G  +EA  VF  + +R  + P++ +YN +I+ 
Sbjct: 98  DLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMING 157

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
             K G    + + +F ++ R G  P+ +T+N+++    +      AR + NE    G + 
Sbjct: 158 LCKNGY-VNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEP 216

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           +  TY T++    +  +++   EI++EM  K  + +   Y T++    K GR+++A  + 
Sbjct: 217 NAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIA 276

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            +M   G+  D  SYNT+++++ + GRF+EAL +  E+E  G++ D  T+  ++ G  K 
Sbjct: 277 EKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKD 336

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G ++   +  + M       NL+ +++++D   K G   +A+++F   +      D   Y
Sbjct: 337 GNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSMEVK----DSFTY 392

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           ++L+  LC+      A  LL    ++G +    T  ++ID    S 
Sbjct: 393 TSLLHNLCRAKKFRIASKLLVASIEDGFQILRATQRAVIDGLTTSG 438



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 167/327 (51%), Gaps = 10/327 (3%)

Query: 205 RLGKVDLAKNIFETALNEG-YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
           RLGK + A  +F      G    ++ +++ +I+   ++GY   A+ +F +++R    P +
Sbjct: 124 RLGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEV 183

Query: 264 VTYNAVIDACGKGG--VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +TYNA+I+   K     D + V+  F D    G +P+ IT+ +++  C R G  E    +
Sbjct: 184 LTYNAMINGLCKARRLADARRVLNEFCDF---GFEPNAITYTTVMKCCFRCGRLEQGLEI 240

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            +EM  +G   D F Y T++ A+ K  +++ A EI  +M +  + P++ +Y+TMI+ + +
Sbjct: 241 LSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCR 300

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            GR D+AL +  E++  G+  D+ ++  ++    K G FE A      M + G   + V 
Sbjct: 301 QGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVA 360

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           +N++L   GK G  D+  ++F+ M+      +  TY++L+    +   ++ A ++     
Sbjct: 361 FNSILDCLGKAGDIDKAVKVFDSMEV----KDSFTYTSLLHNLCRAKKFRIASKLLVASI 416

Query: 502 QAGLKADVVLYSALIDALCKNGLVESA 528
           + G +       A+ID L  +GLV  A
Sbjct: 417 EDGFQILRATQRAVIDGLTTSGLVYEA 443



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 91/191 (47%), Gaps = 5/191 (2%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            +++ L + G+++ A  I E  ++ G    + +++ +I+ + R G   EA+ + + +++ 
Sbjct: 258 TVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQ 317

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            +K +  T+  +I    K G +F+   +  D M   G   + + FNS+L    + G  + 
Sbjct: 318 GMKCDQYTHTIIIHGLCKDG-NFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDK 376

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +F+ M  +    D FTY +LL  +C+  +  +A +++             T   +ID
Sbjct: 377 AVKVFDSMEVK----DSFTYTSLLHNLCRAKKFRIASKLLVASIEDGFQILRATQRAVID 432

Query: 378 GYAKAGRLDDA 388
           G   +G + +A
Sbjct: 433 GLTTSGLVYEA 443



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 9/212 (4%)

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + GL  D++ Y+ LID  C+   +++A ++L+ M + GI P+VV+YNS+     R    +
Sbjct: 35  KLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQ 94

Query: 562 CTVDDVERDL--GKQKE--SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
            ++D  +  L  G + +  S N+   C       +EA      I +  G++    A    
Sbjct: 95  KSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFER-GEIYPSMASYNV 153

Query: 618 KEN-RCRQEIL-CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 675
             N  C+   +   L +F+ + +    P V+T++A++N   +     DA  +L E   F 
Sbjct: 154 MINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFG 213

Query: 676 NQVYGVAHGLLMG--YRDNIWVQALSLFDEVK 705
            +   + +  +M   +R     Q L +  E++
Sbjct: 214 FEPNAITYTTVMKCCFRCGRLEQGLEILSEMR 245


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 196/396 (49%), Gaps = 8/396 (2%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR-YNLKPNLV 264
           LG V+ AK + +    +G    V  ++ LI  Y +     EA  V   M+    L P+  
Sbjct: 274 LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDER 333

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
            Y  +ID  C  G +D    V + D+MLR G++ +    NSL+   C RG + EA   + 
Sbjct: 334 AYGVLIDGYCRTGKID--DAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEA-EGVI 390

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
             MV   +  D ++YNTLLD  C+      AF +  +M  + I P V+TY+T++ G  + 
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G  DDAL ++  M   G+  D V Y+T+L    K+  FE A  + K++ + G  K  +T+
Sbjct: 451 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           N ++ G  K GK  E   +F++MK    SP+ +TY TLID Y K     +A ++    ++
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
             +   + +Y++LI  L K+  +     LL EM   G+ PN+VTY ++ID + +    + 
Sbjct: 571 EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 630

Query: 563 TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
                  ++ +   SAN+  +CS     +   GR D
Sbjct: 631 AFSSY-FEMTENGLSANI-IICSTMVSGLYRLGRID 664



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 241/511 (47%), Gaps = 53/511 (10%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R GK+D A  + +  L  G    ++  ++LI+ Y + G   EA  V   M  +NLKP+  
Sbjct: 344 RTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSY 403

Query: 265 TYNAVIDACGKGGVDFKHVVEIF---DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +YN ++D   + G    H  E F   D ML+ G++P  +T+N+LL    R G ++ A  +
Sbjct: 404 SYNTLLDGYCREG----HTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI 459

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           ++ M+ RG+  D   Y+TLLD + K    + A  +  ++ A+  + + +T++TMI G  K
Sbjct: 460 WHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK 519

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G++ +A  +F +MK LG   D ++Y T++  Y K     +A  V   ME   I      
Sbjct: 520 MGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEM 579

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN+L+ G  K  +  EV  +  +M    ++PN++TY  LID + K G+  +A   + E  
Sbjct: 580 YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 639

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN----------VVTYNSII 551
           + GL A++++ S ++  L + G ++ A  L+ +M   G  P+                I 
Sbjct: 640 ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIA 699

Query: 552 DAFGRSATTECTVDDVERDL--------GKQKESANLDAMCSQDD--------------- 588
           D+   S  T    +++  ++        GK  ++    +M S                  
Sbjct: 700 DSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 759

Query: 589 ---KDVQEAGRTDNQIIK--VFGQLVAEKA---GQGKKENRCRQEILCILGVFQKMHKLK 640
               +V EA R  +++++  +   +V   A   G  K EN  R + L     F K+H+  
Sbjct: 760 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL-----FHKLHQKG 814

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           + PNVVT++ +++   +  + + A  L +++
Sbjct: 815 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 211/451 (46%), Gaps = 54/451 (11%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL+ L   G +  A+Q +   +KR    ++ G   S ++  L ++   + A  +++ 
Sbjct: 440 YNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVG--YSTLLDGLFKMENFEGASTLWKD 497

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L  G+  +   F+ +IS   + G   EA  +F+ MK     P+ +TY  +ID   K   
Sbjct: 498 ILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS- 556

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR-----NLFNEMVHRGIDQD 333
           +     ++   M R  + P    +NSL++     GL+++ R     +L  EM  RG+  +
Sbjct: 557 NVGQAFKVKGAMEREPISPSIEMYNSLIS-----GLFKSRRLVEVTDLLTEMGIRGLTPN 611

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF- 392
           I TY  L+D  CK   +D AF    EM    +S N++  STM+ G  + GR+D+A N+  
Sbjct: 612 IVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA-NLLM 670

Query: 393 -----------------SEMKFLGI-----GLDR----------VSYNTVLSIYAKLGRF 420
                            S++++  I      LD           + YN  ++   K G+ 
Sbjct: 671 QKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKV 730

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           ++A      +   G   D  TY  L+ GY   G  DE  R+ ++M    + PN++TY+ L
Sbjct: 731 DDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNAL 790

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I+   K      A ++F +  Q GL  +VV Y+ LID  CK G +++A  L D+M +EGI
Sbjct: 791 INGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGI 850

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
            P+VVTY+++I+         C   D+ER +
Sbjct: 851 SPSVVTYSALINGL-------CKHGDIERSM 874



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/518 (24%), Positives = 230/518 (44%), Gaps = 113/518 (21%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + +++I+   + G++  A+ +    ++       Y+++ L+  Y R G+  EA ++ + M
Sbjct: 369 ICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 428

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD---------------- 298
            +  ++P ++TYN ++    + G  F   ++I+  M++ GV PD                
Sbjct: 429 LQEGIEPTVLTYNTLLKGLCRVGA-FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMEN 487

Query: 299 -------------------RITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                              RITFN++++ +C  G + E A  +F++M   G   D  TY 
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVE-AEEIFDKMKDLGCSPDGITYR 546

Query: 339 TLLDAICKGAQMDLAFEI-----------------------------------MAEMPAK 363
           TL+D  CK + +  AF++                                   + EM  +
Sbjct: 547 TLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIR 606

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
            ++PN+VTY  +IDG+ K G LD A + + EM   G+  + +  +T++S   +LGR +EA
Sbjct: 607 GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 666

Query: 424 LLVCKEMESSGIRKD--------------------------------AVTYNALLGGYGK 451
            L+ ++M   G   D                                 + YN  + G  K
Sbjct: 667 NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCK 726

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            GK D+ RR F  +      P+  TY TLI  YS  G   EA ++  E  + GL  ++V 
Sbjct: 727 TGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 786

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           Y+ALI+ LCK+  V+ A  L  ++ ++G+ PNVVTYN++ID + +    +      ++ +
Sbjct: 787 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846

Query: 572 GKQ------KESANLDAMCSQDDKDVQEAGRTDNQIIK 603
            +         SA ++ +C     D++ + +  NQ+IK
Sbjct: 847 EEGISPSVVTYSALINGLCKHG--DIERSMKLLNQMIK 882



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 195/400 (48%), Gaps = 39/400 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MIS L ++GK+  A+ IF+   + G       +  LI  Y ++    +A  V  +M+R
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD---DMLRNGVQPDRITFNSLLAVCSRGG 313
             + P++  YN++I    K     + +VE+ D   +M   G+ P+ +T+ +L+    + G
Sbjct: 571 EPISPSIEMYNSLISGLFKS----RRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 626

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN--------- 364
           + + A + + EM   G+  +I   +T++  + +  ++D A  +M +M             
Sbjct: 627 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFL 686

Query: 365 -----------------------ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
                                  + PN + Y+  I G  K G++DDA   FS +   G  
Sbjct: 687 KSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFV 746

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D  +Y T++  Y+  G  +EA  +  EM   G+  + VTYNAL+ G  K    D  +R+
Sbjct: 747 PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL 806

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F ++    + PN++TY+TLID Y K G    A ++  +  + G+   VV YSALI+ LCK
Sbjct: 807 FHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCK 866

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +G +E ++ LL++M K G+   ++ Y +++  + RS   +
Sbjct: 867 HGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQ 906



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 220/475 (46%), Gaps = 61/475 (12%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG------------ 277
            F  ++  Y   G  + A+ VF++M +    P+L + N++++   K G            
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 278 VDFKHVVEIF----------------------DDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           +    V ++F                        M   GV+P+ +T++SL+      G  
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYST 374
           EAA+ +   M  +G+ +++ TY  L+   CK  +MD A +++  M  +  + P+   Y  
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDGY + G++DDA+ +  EM  LG+  +    N++++ Y K G   EA  V   M    
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++ D+ +YN LL GY ++G   E   + ++M  + + P +LTY+TL+    + G + +A+
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           QI+    + G+  D V YS L+D L K    E A +L  ++   G   + +T+N++I   
Sbjct: 458 QIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517

Query: 555 ---GRSATTECTVDDVERDLGKQKESAN----LDAMCSQDDKDVQEAGRTDNQI------ 601
              G+    E   D + +DLG   +       +D  C     +V +A +    +      
Sbjct: 518 CKMGKMVEAEEIFDKM-KDLGCSPDGITYRTLIDGYCKA--SNVGQAFKVKGAMEREPIS 574

Query: 602 --IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
             I+++  L++     G  ++R   E+  +L    +M    + PN+VT+ A+++ 
Sbjct: 575 PSIEMYNSLIS-----GLFKSRRLVEVTDLL---TEMGIRGLTPNIVTYGALIDG 621



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 226/501 (45%), Gaps = 78/501 (15%)

Query: 255 KRYNLKPNLVTY--------------------NAVIDAC---GKGGVDFKHVVEIFDDML 291
           K+ N +PN+ +Y                    N ++D C    +G V +  +V ++ +  
Sbjct: 94  KQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREF- 152

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
                P    F+ +L V    GL + A  +F+ M   G    + + N+LL+ + K  +  
Sbjct: 153 --AFSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETH 208

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A  +  +M    I P+V   S M++ + K G++D+A     +M+ LG+  + V+Y++++
Sbjct: 209 TAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLI 268

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD-CV 470
           + Y  LG  E A  V K M   G+ ++ VTY  L+ GY KQ K DE  ++   M+ +  +
Sbjct: 269 NGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAAL 328

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            P+   Y  LID Y + G   +A+++  E  + GLK ++ + ++LI+  CK G +  A  
Sbjct: 329 VPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 388

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCSQDDK 589
           ++  M    ++P+  +YN+++D + R               G   E+ NL D M  +   
Sbjct: 389 VITRMVDWNLKPDSYSYNTLLDGYCRE--------------GHTSEAFNLCDKMLQE--- 431

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
            ++    T N ++K   ++ A                   L ++  M K  + P+ V +S
Sbjct: 432 GIEPTVLTYNTLLKGLCRVGAFDDA---------------LQIWHLMMKRGVAPDEVGYS 476

Query: 650 AILNACSRCNSFEDASMLLEEL--------RL-FDNQVYGVAHGLLMGYRDNIWVQALSL 700
            +L+   +  +FE AS L +++        R+ F+  + G+     MG      V+A  +
Sbjct: 477 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK---MGK----MVEAEEI 529

Query: 701 FDEVKLMDSSTASAFYNALTD 721
           FD++K +  S     Y  L D
Sbjct: 530 FDKMKDLGCSPDGITYRTLID 550



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 146/284 (51%), Gaps = 6/284 (2%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + S M+S L RLG++D A  + +  ++ G+      F  L S    +   + A S+  S 
Sbjct: 649 ICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF--LKSDIRYAAIQKIADSLDESC 706

Query: 255 KRYNLKPNLVTYN-AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           K + L PN + YN A+   C  G VD       F  +   G  PD  T+ +L+   S  G
Sbjct: 707 KTF-LLPNNIVYNIAIAGLCKTGKVD--DARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             + A  L +EM+ RG+  +I TYN L++ +CK   +D A  +  ++  K + PNVVTY+
Sbjct: 764 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYN 823

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+IDGY K G +D A  +  +M   GI    V+Y+ +++   K G  E ++ +  +M  +
Sbjct: 824 TLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G+    + Y  L+ GY + G+  ++ ++++ M   C+S   +++
Sbjct: 884 GVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISH 927



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 164/356 (46%), Gaps = 33/356 (9%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           ++  +++LIS   +S    E   +   M    L PN+VTY A+ID   K G+  K     
Sbjct: 576 SIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSY 635

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI--DQDIF--------- 335
           F+ M  NG+  + I  +++++   R G  + A  L  +MV  G   D + F         
Sbjct: 636 FE-MTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA 694

Query: 336 ---------------------TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
                                 YN  +  +CK  ++D A    + +  K   P+  TY T
Sbjct: 695 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCT 754

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I GY+ AG +D+A  +  EM   G+  + V+YN +++   K    + A  +  ++   G
Sbjct: 755 LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 814

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  + VTYN L+ GY K G  D   ++ ++M  + +SP+++TYS LI+   K G  + +M
Sbjct: 815 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSM 874

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           ++  +  +AG+ + ++ Y  L+    ++G ++    L D M    +    +++  +
Sbjct: 875 KLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHKQV 930



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 140/307 (45%), Gaps = 18/307 (5%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+I    + G +D A + +      G    +   S ++S   R G   EA  +   M  +
Sbjct: 617 ALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 676

Query: 258 NLKPNL-------VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCS 310
              P+        + Y A+           + + +  D+  +  + P+ I +N  +A   
Sbjct: 677 GFFPDHECFLKSDIRYAAI-----------QKIADSLDESCKTFLLPNNIVYNIAIAGLC 725

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           + G  + AR  F+ +  +G   D FTY TL+        +D AF +  EM  + + PN+V
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 785

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TY+ +I+G  K+  +D A  +F ++   G+  + V+YNT++  Y K+G  + A  +  +M
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
              GI    VTY+AL+ G  K G  +   ++  QM    V   L+ Y TL+  Y + G  
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEM 905

Query: 491 KEAMQIF 497
           ++  +++
Sbjct: 906 QKIHKLY 912


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 146/564 (25%), Positives = 246/564 (43%), Gaps = 114/564 (20%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MIS L R G V+ A    E  ++ G     + + AL++   +    +EA ++ + M  
Sbjct: 282 NVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSC 341

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             LKPN+V Y  ++D   K G       +I  +M+  GVQP++I +++L+  +C  G L 
Sbjct: 342 SGLKPNIVVYGTLVDGFMKEG-KTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLG 400

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            A++ L  EM+  G+  D FTYN L+    +    D AFE++ EM    I PNV +Y  M
Sbjct: 401 RASK-LLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIM 459

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGI-------------------------GLDRVS---- 406
           I+G  + G   +A N+  EM   G+                          L++++    
Sbjct: 460 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANV 519

Query: 407 ------YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
                 YN+++   + +GR EEA     +++  G+  D  TY+ L+ GY K G  ++  +
Sbjct: 520 HPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQ 579

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE---------------------------- 492
           +  QM    + PN  TY+ L++ Y K   Y++                            
Sbjct: 580 LLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLS 639

Query: 493 -------AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
                  A  +  E ++ GL  D+ +YS+LI  LCK   +E AV LLDEM KEG+ P +V
Sbjct: 640 RSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIV 699

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
            YN++ID F RS            D+ + +     D++ ++        G   N +   +
Sbjct: 700 CYNALIDGFCRSG-----------DISRARNV--FDSILAK--------GLVPNCV--TY 736

Query: 606 GQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
             L+         +  C+  +I     ++++M    I P+   ++ +   CS     E A
Sbjct: 737 TALI---------DGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQA 787

Query: 665 SMLLEEL--------RLFDNQVYG 680
             L EE+         LF+  V+G
Sbjct: 788 LFLTEEMFNRGYANVSLFNTLVHG 811



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 206/432 (47%), Gaps = 36/432 (8%)

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           M+   + P++ TY+  I+A  K   DF    ++F++M R     + +T+N +++   R G
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKA-RDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 292

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             E A     EMV  G+  D FTY  L++ +CKG+++  A  ++ EM    + PN+V Y 
Sbjct: 293 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYG 352

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T++DG+ K G+  +A ++  EM   G+  +++ Y+ ++    K+G+   A  + KEM   
Sbjct: 353 TLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKV 412

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G+R D  TYN L+ G+ +Q   D    +  +M+   + PN+ +Y  +I+   + G  KEA
Sbjct: 413 GLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEA 472

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             +  E    GLK +  +Y+ LI    K G +  A   L++MTK  + P++  YNS+I  
Sbjct: 473 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKG 532

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
                            +G+ +E+    A        VQ+ G   ++    +  L+    
Sbjct: 533 LST--------------VGRMEEAEEYYA-------QVQKRGLVPDEF--TYSGLIHGYC 569

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL-- 671
             G  E   +        + ++M    +KPN  T++ +L    + N +E  S +L+ +  
Sbjct: 570 KTGNLEKADQ--------LLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLG 621

Query: 672 --RLFDNQVYGV 681
                DN +YG+
Sbjct: 622 SGDKPDNHIYGI 633



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 213/481 (44%), Gaps = 71/481 (14%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           VY +S  I A+ ++     A  VF  M+R +   N VTYN +I   C  G V+       
Sbjct: 243 VYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVE--EAFGF 300

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
            ++M+  G+ PD  T+ +L+    +G   + A+ L +EM   G+  +I  Y TL+D   K
Sbjct: 301 KEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMK 360

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +   AF+I+ EM +  + PN + Y  +I G  K G+L  A  +  EM  +G+  D  +
Sbjct: 361 EGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFT 420

Query: 407 YNTVL----SIYAKLGRFE-------------------------------EALLVCKEME 431
           YN ++      + K G FE                               EA  + +EM 
Sbjct: 421 YNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMI 480

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           S G++ +A  Y  L+ G+ K+G         E+M    V P+L  Y++LI   S  G  +
Sbjct: 481 SEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRME 540

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA + + + ++ GL  D   YS LI   CK G +E A  LL +M   G++PN  TY  ++
Sbjct: 541 EAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLL 600

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
           + + +S   E             K S+ L +M    DK        DN I   +G ++  
Sbjct: 601 EGYFKSNDYE-------------KVSSILQSMLGSGDK-------PDNHI---YGIVI-- 635

Query: 612 KAGQGKKENRCRQEILCI-LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                   N  R E + +   V  ++ K  + P++  +S++++   +    E A  LL+E
Sbjct: 636 -------RNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDE 688

Query: 671 L 671
           +
Sbjct: 689 M 689



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 156/338 (46%), Gaps = 18/338 (5%)

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N LL  + +   M+L +++   M    I P+V TYST I+ + KA   D A  +F EM+ 
Sbjct: 212 NGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRR 271

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
               ++ V+YN ++S   + G  EEA    +EM   G+  DA TY AL+ G  K  +  E
Sbjct: 272 RDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKE 331

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            + + ++M    + PN++ Y TL+D + K G   EA  I +E   AG++ + ++Y  LI 
Sbjct: 332 AKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIR 391

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            LCK G +  A  LL EM K G+RP+  TYN ++    +        D     L + + S
Sbjct: 392 GLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDK----DGAFELLNEMRNS 447

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI-------- 629
             L  + S     +   G   N   K  G L+ E   +G K N      L I        
Sbjct: 448 GILPNVYSY---GIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNI 504

Query: 630 ---LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
                  +KM K  + P++  +++++   S     E+A
Sbjct: 505 SLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEA 542



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 195/428 (45%), Gaps = 23/428 (5%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI+ L + G+   A N+ E  ++EG     + ++ LI  + + G    A      M + N
Sbjct: 459 MINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKAN 518

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           + P+L  YN++I      G   +   E +  + + G+ PD  T++ L+    + G  E A
Sbjct: 519 VHPDLFCYNSLIKGLSTVG-RMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKA 577

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L  +M++ G+  +  TY  LL+   K    +    I+  M      P+   Y  +I  
Sbjct: 578 DQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRN 637

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
            +++  ++ A  + +E++  G+  D   Y++++S   K+   E+A+ +  EM   G+   
Sbjct: 638 LSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPG 697

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            V YNAL+ G+ + G     R +F+ + A  + PN +TY+ LID   K G   +A  +++
Sbjct: 698 IVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYK 757

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E    G+  D  +Y+ L         +E A+ L +EM   G   NV  +N+++  F +  
Sbjct: 758 EMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-ANVSLFNTLVHGFCKR- 815

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
                        GK +E+  L  +    D+++    +T  +++  FG     KAG+  +
Sbjct: 816 -------------GKLQETEKL--LHVMMDREIVPNAQTVEKVVSEFG-----KAGKLGE 855

Query: 619 ENRCRQEI 626
            +R   E+
Sbjct: 856 AHRVFAEL 863



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 149/326 (45%), Gaps = 28/326 (8%)

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
           +++ SP+      ++D Y K G + +A  +   M  LG+   R   N +L    +    E
Sbjct: 166 SRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAME 225

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
               +   ME +GI  D  TY+  +  + K   +D  +++FE+M+    + N +TY+ +I
Sbjct: 226 LLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMI 285

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
               + G  +EA     E    GL  D   Y AL++ LCK   ++ A +LLDEM+  G++
Sbjct: 286 SGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLK 345

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVERDL--GKQKESANLDAMCSQDDKDVQEAGRTD- 598
           PN+V Y +++D F +   T    D ++  +  G Q      D +     K + + GR   
Sbjct: 346 PNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCK-IGQLGRASK 404

Query: 599 --NQIIKV--------FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK---IKPNV 645
              ++IKV        +  L+     Q  K+           G F+ +++++   I PNV
Sbjct: 405 LLKEMIKVGLRPDTFTYNPLMQGHFQQHDKD-----------GAFELLNEMRNSGILPNV 453

Query: 646 VTFSAILNACSRCNSFEDASMLLEEL 671
            ++  ++N   +    ++A  LLEE+
Sbjct: 454 YSYGIMINGLCQNGESKEAGNLLEEM 479



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 111/220 (50%), Gaps = 5/220 (2%)

Query: 180 AFAVKREERKN---DQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALIS 236
           AF V  E  KN       + S++IS L ++  ++ A  + +    EG    +  ++ALI 
Sbjct: 647 AFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALID 706

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQ 296
            + RSG    A +VF+S+    L PN VTY A+ID   K G D     +++ +ML  G+ 
Sbjct: 707 GFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNG-DITDAFDLYKEMLDRGIA 765

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           PD   +N L   CS     E A  L  EM +RG   ++  +NTL+   CK  ++    ++
Sbjct: 766 PDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQETEKL 824

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           +  M  + I PN  T   ++  + KAG+L +A  +F+E++
Sbjct: 825 LHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQ 864



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 102/214 (47%)

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           + L+D   K   +  A +++  M    ++P     + ++    +A  ++    +   M+ 
Sbjct: 177 DVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEG 236

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI  D  +Y+T +  + K   F+ A  V +EM       + VTYN ++ G  + G  +E
Sbjct: 237 AGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 296

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
                E+M    +SP+  TY  L++   KG   KEA  +  E   +GLK ++V+Y  L+D
Sbjct: 297 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVD 356

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
              K G    A  +L EM   G++PN + Y+++I
Sbjct: 357 GFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLI 390


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 182/352 (51%), Gaps = 11/352 (3%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
            +   L  G+   V  ++ LI+ + + G  ++A  +FN +++  L+P  V++N +I+   
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 275 KG-----GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
           K      G   K  +E       N + PD  T++ L+    + G  + A  LF+EM  RG
Sbjct: 270 KSRNLDEGFRLKKTME------ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG 323

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  +  T+  L+D   +  +MD A     +M    + P++V Y+T+++G  K G ++ A 
Sbjct: 324 LRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKAR 383

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            +  EMK +G+  D+++Y T++  Y K G  E A+ + K M   G+  D V + AL+ G+
Sbjct: 384 KLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGF 443

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            + G+  +  R   +M    + P+  TY+ +ID Y K G  K   ++ +E +  G K  V
Sbjct: 444 CRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGV 503

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + Y+ L++ LCK G +++A  LL+ M   G+ P+ +TYN +++   ++   E
Sbjct: 504 ITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE 555



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 184/361 (50%), Gaps = 3/361 (0%)

Query: 202 ILGRLGKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           ++ R GK D A ++F   L+  G   + + F AL+ AY  SG+  +AI  F  ++  N +
Sbjct: 127 LVSRKGK-DSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQ 185

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
                   ++D           +   + ++L  G  P    +N L+    + G    A+ 
Sbjct: 186 IPFHGCGYLLDKMINSNSPVT-IWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKL 244

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           +FNE+  RG+     ++NTL++ +CK   +D  F +   M    I P+V TYS +I G  
Sbjct: 245 IFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLC 304

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K GRLD A  +F EM+  G+  + +++  ++    +  R + A+    +M + G++ D V
Sbjct: 305 KEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLV 364

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
            YN LL G  K G  ++ R++ ++MK   + P+ +TY+TLID Y K G  + AM+I +  
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGM 424

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            + G+  D V ++ALI   C++G V  A   L EM + G++P+  TY  +ID + +    
Sbjct: 425 NEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNV 484

Query: 561 E 561
           +
Sbjct: 485 K 485



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 192/360 (53%), Gaps = 6/360 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+   + G +  AK IF      G   T  +F+ LI+   +S    E   +  +M+   
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           + P++ TY+ +I   C +G +D     ++FD+M + G++P+ ITF +L+    R    ++
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAE--QLFDEMQQRGLRPNGITFTALIDGQYRSRRMDS 346

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A N +++M+  G+  D+  YNTLL+ +CK   ++ A +++ EM    + P+ +TY+T+ID
Sbjct: 347 AMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLID 406

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GY K G L+ A+ +   M   G+ LD V++  ++S + + GR  +A    +EM  +G++ 
Sbjct: 407 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKP 466

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  TY  ++ GY K+G      ++ ++M+ +   P ++TY+ L++   K G  K A  + 
Sbjct: 467 DDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLL 526

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
                 G+  D + Y+ L++  CKNG  E  + L +E   +G+  +   Y S++  + +S
Sbjct: 527 EAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAYYTSLVSEYNKS 583



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 183/386 (47%), Gaps = 12/386 (3%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
           G +     F++L+      G    A   F  + +            LLD +         
Sbjct: 148 GTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTI 207

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
           +   +E+      P V  Y+ +I+ + K G + DA  +F+E++  G+    VS+NT+++ 
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
             K    +E   + K ME + I  D  TY+ L+ G  K+G+ D   ++F++M+   + PN
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            +T++ LID   +      AM  + +    G+K D+V+Y+ L++ LCK G V  A  L+D
Sbjct: 328 GITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD-----AMCSQDD 588
           EM   G++P+ +TY ++ID + +    E     +E   G  +E   LD     A+ S   
Sbjct: 388 EMKMVGMKPDKITYTTLIDGYCKEGDLESA---MEIRKGMNEEGVVLDNVAFTALISGFC 444

Query: 589 KD--VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNV 645
           +D  V++A RT  ++++  G    +       +  C++  +     + ++M     KP V
Sbjct: 445 RDGRVRDAERTLREMVEA-GMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGV 503

Query: 646 VTFSAILNACSRCNSFEDASMLLEEL 671
           +T++ ++N   +    ++A+MLLE +
Sbjct: 504 ITYNVLMNGLCKQGQMKNANMLLEAM 529



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 148/290 (51%), Gaps = 4/290 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L + G++D+A+ +F+     G       F+ALI    RS     A++ ++ M  
Sbjct: 297 SVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLT 356

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +KP+LV YN +++   K G D     ++ D+M   G++PD+IT+ +L+    + G  E
Sbjct: 357 MGVKPDLVMYNTLLNGLCKVG-DVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLE 415

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +A  +   M   G+  D   +  L+   C+  ++  A   + EM    + P+  TY+ +I
Sbjct: 416 SAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVI 475

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DGY K G +     +  EM+  G     ++YN +++   K G+ + A ++ + M + G+ 
Sbjct: 476 DGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVT 535

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            D +TYN LL G+ K GK +++ ++  + K   V  +   Y++L+  Y+K
Sbjct: 536 PDDITYNILLEGHCKNGKAEDLLKLRNE-KGLIV--DYAYYTSLVSEYNK 582


>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
 gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
          Length = 2052

 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 175/337 (51%), Gaps = 6/337 (1%)

Query: 229  YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
            + +S ++  Y   G  ++A+++   MK+  +  N   YN ++    K G + K  +++  
Sbjct: 1698 FTYSTIVRGYCEDGETRQALALLEHMKKAEVPANAKLYNIILTHLCKHGKE-KEALDLLH 1756

Query: 289  DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
             M      PD  T+N L+    + G  E A+ L   M  R    DI TYNTL+  +C+  
Sbjct: 1757 SMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKG 1816

Query: 349  ----QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
                +++ AF +  EM  K  +P  VTY+ +ID   +    + A  +   M   G   D 
Sbjct: 1817 NGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDL 1876

Query: 405  VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            V+YN +++ +AK G  ++A+ +  EM + G   D VTYN+++ G+ K GK +E  ++F +
Sbjct: 1877 VTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAE 1936

Query: 465  MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
            MKA  + PN  TY+++ D   K G  ++A     E ++ GL  D + Y ALI  +CK G 
Sbjct: 1937 MKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL-VDAISYVALISTICKLGK 1995

Query: 525  VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             +    LL EM ++G +PN+VT+N + +A  + + T+
Sbjct: 1996 GKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTD 2032



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 173/347 (49%), Gaps = 6/347 (1%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
            Y+ ++R     GE  +A+       K E   N   KL + +++ L + GK   A ++  +
Sbjct: 1700 YSTIVRGYCEDGETRQALALLEHMKKAEVPAN--AKLYNIILTHLCKHGKEKEALDLLHS 1757

Query: 219  ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
                     +Y ++ LI+A  + G  ++A  +   M+      ++VTYN +I   C KG 
Sbjct: 1758 MATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGN 1817

Query: 278  VDFK--HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
              F+      +F++M+  G  P  +T+  ++    R  + E A+ + + M   G   D+ 
Sbjct: 1818 GRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLV 1877

Query: 336  TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            TYN L++   K   MD A ++  EMP +   P+VVTY++++DG+ KAG++++A  +F+EM
Sbjct: 1878 TYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEM 1937

Query: 396  KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
            K  GI  +  +Y ++     K GR ++A     EM   G+  DA++Y AL+    K GK 
Sbjct: 1938 KARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL-VDAISYVALISTICKLGKG 1996

Query: 456  DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
                ++  +M      PNL+T++ + +  SK     +A  + +E +Q
Sbjct: 1997 KLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTDDAKIMIQELRQ 2043



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 145/280 (51%), Gaps = 6/280 (2%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSG----YCQEAISVFNSM 254
            +I+ L ++G+++ A+ + E          +  ++ LI    R G      + A  +F  M
Sbjct: 1773 LINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEM 1832

Query: 255  KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
                  P  VTY  VIDA  +  +D +   ++ D M  NG   D +T+N L+   ++ G+
Sbjct: 1833 VDKGHTPTSVTYTVVIDALLRVKMD-EQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGM 1891

Query: 315  WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             + A +LF EM  RG   D+ TYN+++D  CK  +++ A ++ AEM A+ I PN  TY++
Sbjct: 1892 MDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTS 1951

Query: 375  MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
            + D   KAGR+ DA     EM+  G+ +D +SY  ++S   KLG+ +    + +EM   G
Sbjct: 1952 ITDACLKAGRMQDAHAYLVEMRKEGL-VDAISYVALISTICKLGKGKLGFQLLREMLEKG 2010

Query: 435  IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
             + + VT+N +     K+   D+ + M ++++    SP L
Sbjct: 2011 FKPNLVTFNVVFEALSKESNTDDAKIMIQELRQQHSSPPL 2050



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 188/410 (45%), Gaps = 50/410 (12%)

Query: 292  RNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
            R+G       FN LL  + ++     A + L  E        + FTY+T++   C+  + 
Sbjct: 1654 RHGYTHTAFAFNRLLEFLVNKRQYKRAHQMLIAESKPSSFQANAFTYSTIVRGYCEDGET 1713

Query: 351  DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
              A  ++  M    +  N   Y+ ++    K G+  +AL++   M       D  +YN +
Sbjct: 1714 RQALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNIL 1773

Query: 411  LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG----KYDEVRRMFEQMK 466
            ++   K+GR E+A  + + M++     D VTYN L+ G  ++G    + +   R+FE+M 
Sbjct: 1774 INALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMV 1833

Query: 467  ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
                +P  +TY+ +ID   +  + ++A ++     + G   D+V Y+ LI+   K G+++
Sbjct: 1834 DKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMD 1893

Query: 527  SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
             A+ L  EM   G  P+VVTYNSI+D F ++              GK +E+  L A    
Sbjct: 1894 KAMDLFVEMPTRGCIPDVVTYNSIVDGFCKA--------------GKVEEANKLFA--EM 1937

Query: 587  DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN----RCRQE-------------ILCI 629
              + +   GRT   I          KAG+ +  +      R+E              +C 
Sbjct: 1938 KARGIFPNGRTYTSITD-----ACLKAGRMQDAHAYLVEMRKEGLVDAISYVALISTICK 1992

Query: 630  LG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            LG       + ++M +   KPN+VTF+ +  A S+ ++ +DA ++++ELR
Sbjct: 1993 LGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTDDAKIMIQELR 2042


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 200/410 (48%), Gaps = 11/410 (2%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK- 213
           D YT+  LL  L   G   +A     F      RK  + K+++  I I G   K  L++ 
Sbjct: 303 DCYTYGSLLNYLCKNGRCREA----RFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEM 358

Query: 214 -NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
            +  +  +  G     + F+   SAY + G   +A+ +FN M+++ L PN+V Y A+IDA
Sbjct: 359 HSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDA 418

Query: 273 -CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            C  G VD   V   F+ M+  GV P+ + FNSL+        WE A  L  EM+ +GI 
Sbjct: 419 LCKLGRVDDAEVK--FNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGIC 476

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            +   +NTL+  +C   ++     ++  M    + P+  +Y+ +I GY   GR D+A  +
Sbjct: 477 PNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKV 536

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F  M  +G+    V+YNT+L  Y    R ++A  + +EM   G+    VTYN +L G  +
Sbjct: 537 FDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQ 596

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
             ++ E + ++  M       ++ TY+ +++   K     EA ++F+     GL+ +++ 
Sbjct: 597 TKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIIT 656

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           ++ +I AL K G  E A+ L   +   G+ PNVVTY  + +      + E
Sbjct: 657 FTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLE 706



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 176/381 (46%), Gaps = 20/381 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMK 255
           S +I    R+G ++     F   L  G+     A + L+          EA+ V    M 
Sbjct: 94  SILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMP 153

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF-------DDMLRNGVQPDRITFNSLLAV 308
                P+ V+Y  ++    KG  + K   E         DD  R    P+ ++++ ++  
Sbjct: 154 ELGCMPDTVSYTILL----KGLCNEKRAEEALELLHMMADDHGRR-CPPNVVSYSIVING 208

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
               G  +   NLF EM+ RGI  D+ TY T++D +CK    D A  +  +M      PN
Sbjct: 209 FFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPN 268

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
             TY+ +I GY   G+  + + M  EM   G+  D  +Y ++L+   K GR  EA     
Sbjct: 269 NYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFD 328

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            M   GI+    TY  L+ GY  +G   E+    + M  + +SP+   ++     Y+K G
Sbjct: 329 SMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCG 388

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
           +  +AM IF + +Q GL  +VV Y ALIDALCK G V+ A    ++M  EG+ PN+V +N
Sbjct: 389 MIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 448

Query: 549 SIIDAFGRSATTECTVDDVER 569
           S++          CTVD  ER
Sbjct: 449 SLVYGL-------CTVDKWER 462



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 199/407 (48%), Gaps = 3/407 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+    + G+W + +Q       R  + +       ++++ L + G+   A+  F++
Sbjct: 272 YNCLIHGYLSIGKWKEVVQMLEEMSARGLKPD--CYTYGSLLNYLCKNGRCREARFFFDS 329

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            + +G    V  +  LI  Y   G   E  S  + M    L P+   +N    A  K G+
Sbjct: 330 MIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGM 389

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                ++IF+ M ++G+ P+ + + +L+    + G  + A   FN+M++ G+  +I  +N
Sbjct: 390 -IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 448

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L+  +C   + + A E++ EM  + I PN V ++T+I      GR+ +   +   M+ +
Sbjct: 449 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 508

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D  SY  ++S Y   GR +EA  V   M S G+    VTYN LL GY    + D+ 
Sbjct: 509 GVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 568

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +F +M    V+P ++TY+T++    +   + EA +++     +G K D+  Y+ +++ 
Sbjct: 569 YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNG 628

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           LCK+  V+ A  +   +  +G++ N++T+  +I A  +    E  +D
Sbjct: 629 LCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 675



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 149/552 (26%), Positives = 231/552 (41%), Gaps = 100/552 (18%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGR---SGYCQEAISVFNSMKRY---NLKPN 262
           +D A  +F+  L+     +V AF+ L++A  R   S   + A+S FN M R     + PN
Sbjct: 30  LDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPN 89

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
           L TY+ +I    + G   +H    F  +L+ G + D I  N LL  +C    + EA   L
Sbjct: 90  LCTYSILIGRFCRMG-HLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVL 148

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI---MAEMPAKNISPNVVTYSTMIDG 378
              M   G   D  +Y  LL  +C   + + A E+   MA+   +   PNVV+YS +I+G
Sbjct: 149 LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVING 208

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           +   G++D   N+F EM      +DR                             GI  D
Sbjct: 209 FFTEGQVDKPYNLFLEM------IDR-----------------------------GIPPD 233

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VTY  ++ G  K   +D    +F+QM  +   PN  TY+ LI  Y   G +KE +Q+  
Sbjct: 234 VVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLE 293

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E    GLK D   Y +L++ LCKNG    A    D M ++GI+P V TY  +I  +    
Sbjct: 294 EMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKG 353

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
                                L  M S  D  V+     D+ I  +F    A K G   K
Sbjct: 354 A--------------------LSEMHSFLDLMVENGLSPDHHIFNIFFSAYA-KCGMIDK 392

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL------- 671
                      + +F KM +  + PNVV + A+++A  +    +DA +   ++       
Sbjct: 393 A----------MDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTP 442

Query: 672 --RLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQK 729
              +F++ VYG+          + W +A  L  E+        + F+N L   L + G+ 
Sbjct: 443 NIVVFNSLVYGLC-------TVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR- 494

Query: 730 RGAQLVVLEGKR 741
                 V+EG+R
Sbjct: 495 ------VMEGRR 500



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 195/446 (43%), Gaps = 44/446 (9%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V ++S +I+ +   G   +  ++F  M    + P++VTY  VID   K  + F     +F
Sbjct: 199 VVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQL-FDRAEGVF 257

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
             M+ NG +P+  T+N L+      G W+    +  EM  RG+  D +TY +LL+ +CK 
Sbjct: 258 QQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKN 317

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +   A      M  K I P V TY  +I GYA  G L +  +    M   G+  D   +
Sbjct: 318 GRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIF 377

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N   S YAK G  ++A+ +  +M   G+  + V Y AL+    K G+ D+    F QM  
Sbjct: 378 NIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMIN 437

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
           + V+PN++ +++L+        ++ A ++  E    G+  + V ++ LI  LC  G V  
Sbjct: 438 EGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVME 497

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDD-VERDLGKQKESAN--LD 581
              L+D M   G+RP+  +Y  +I  +   GR+   E   D  V   L   + + N  L 
Sbjct: 498 GRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLH 557

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
             CS        A R D+                                +F++M +  +
Sbjct: 558 GYCS--------ASRIDDAYC-----------------------------LFREMLRKGV 580

Query: 642 KPNVVTFSAILNACSRCNSFEDASML 667
            P VVT++ IL+   +   F +A  L
Sbjct: 581 TPGVVTYNTILHGLFQTKRFSEAKEL 606



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 177/359 (49%), Gaps = 5/359 (1%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+I  L +LG+VD A+  F   +NEG    +  F++L+         + A  +   M   
Sbjct: 414 ALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQ 473

Query: 258 NLKPNLVTYNAVI-DACGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            + PN V +N +I + C  G V + + ++++ + +   GV+PD  ++  L++     G  
Sbjct: 474 GICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV---GVRPDAFSYTPLISGYCLTGRT 530

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  +F+ MV  G+     TYNTLL   C  +++D A+ +  EM  K ++P VVTY+T+
Sbjct: 531 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTI 590

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G  +  R  +A  ++  M   G   D  +YN +L+   K    +EA  + + + S G+
Sbjct: 591 LHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 650

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + +T+  ++G   K G+ ++   +F  + A+ + PN++TY  + +   + G  +E   
Sbjct: 651 QLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDS 710

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +F   ++ G   +  + +AL+  L   G +  A + L ++ +        T + ++  F
Sbjct: 711 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIF 769



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 135/262 (51%), Gaps = 8/262 (3%)

Query: 191 DQGKLASA-----MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           DQG   +A     +I  L  +G+V   + + +   + G     ++++ LIS Y  +G   
Sbjct: 472 DQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTD 531

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           EA  VF+ M    L P  VTYN ++   C    +D  +   +F +MLR GV P  +T+N+
Sbjct: 532 EAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYC--LFREMLRKGVTPGVVTYNT 589

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           +L    +   +  A+ L+  M++ G   DI+TYN +L+ +CK   +D AF++   + +K 
Sbjct: 590 ILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG 649

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           +  N++T++ MI    K GR +DA+++F+ +   G+  + V+Y  V     + G  EE  
Sbjct: 650 LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFD 709

Query: 425 LVCKEMESSGIRKDAVTYNALL 446
            +   ME +G   ++   NAL+
Sbjct: 710 SLFSAMEKNGTAPNSQMLNALV 731


>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Vitis vinifera]
          Length = 929

 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 182/357 (50%), Gaps = 3/357 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I++  ++GKV  A  + +     G  + +  +S LI+ + R      A +VF  + +  
Sbjct: 470 LINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDG 529

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           LKP++V YN +I A CG G +D    +    +M +   +P   TF  ++   +R G    
Sbjct: 530 LKPDVVLYNNIIRAFCGMGNMD--RAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRR 587

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +F+ M   G    + T+N L+  + +  QM+ A EI+ EM    ISPN  TY+T++ 
Sbjct: 588 ALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMH 647

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GYA  G    A   F+++K  G+ LD  +Y  +L    K GR + AL V +EM S  I +
Sbjct: 648 GYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPR 707

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +   YN L+ G+ ++G   E   + +QMK + V P++ TY++ I+   K G  + A +  
Sbjct: 708 NTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTI 767

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +E +  G+K ++  Y+ LI    +  L E A+    EM   G++P+   Y+ ++ + 
Sbjct: 768 QEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSL 824



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 178/348 (51%), Gaps = 3/348 (0%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +F+     G+  +V ++  LI+ Y + G   +A+ V   M+   +K N+ TY+ +I+   
Sbjct: 451 VFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFV 510

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQD 333
           +   D+ +   +F+D++++G++PD + +N+++ A C  G +  A R +  EM        
Sbjct: 511 RLK-DWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTV-KEMQKERHRPT 568

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             T+  ++    +   M  A EI   M      P V T++ +I G  +  +++ A+ +  
Sbjct: 569 TRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILD 628

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           EM   GI  +  +Y T++  YA LG   +A     ++++ G+  D  TY ALL    K G
Sbjct: 629 EMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSG 688

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           +      +  +M +  +  N   Y+ LID +++ G   EA ++ ++ KQ G++ D+  Y+
Sbjct: 689 RMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYT 748

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + I+A CK G ++ A   + EM   G++PN+ TY ++I  + R++  E
Sbjct: 749 SFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPE 796



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 131/578 (22%), Positives = 253/578 (43%), Gaps = 53/578 (9%)

Query: 172 WSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAF 231
           W   +Q F   +K+  RK         M++   R G +  A+  FE+    G   T + +
Sbjct: 274 WQAVVQAFE-RIKKPSRKE-----FGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVY 327

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           ++LI AY      +EA+S    MK   ++ +LVTY+ ++    K   D +     F +  
Sbjct: 328 TSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIA-DAEAADHWFKEAK 386

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
                 + I + +++    +      A  L  EM   GID  I  Y+T++D        +
Sbjct: 387 ERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEE 446

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
               +   +     +P+V++Y  +I+ Y K G++  AL +   M+  GI  +  +Y+ ++
Sbjct: 447 KCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLI 506

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           + + +L  +  A  V +++   G++ D V YN ++  +   G  D   R  ++M+ +   
Sbjct: 507 NGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHR 566

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P   T+  +I  +++ G  + A++IF   + +G    V  ++ALI  L +   +E AV +
Sbjct: 567 PTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEI 626

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSAT--------TECTVDDVERDLGKQKESANLDAM 583
           LDEM+  GI PN  TY +I+  +             T+   + +E D+   +  A L A 
Sbjct: 627 LDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYE--ALLKAC 684

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC-----------RQEILCILGV 632
           C        ++GR  + +      +  E + Q    N             R ++     +
Sbjct: 685 C--------KSGRMQSAL-----AVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAEL 731

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG------LL 686
            Q+M +  ++P++ T+++ +NAC +    + A+  ++E+     +V GV         L+
Sbjct: 732 MQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEM-----EVVGVKPNIKTYTTLI 786

Query: 687 MGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
            G+ R ++  +AL  F E+K        A Y+ L   L
Sbjct: 787 HGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSL 824



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 191/403 (47%), Gaps = 40/403 (9%)

Query: 279 DFKHVVEIFDDMLRNGVQ-------PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           DF+ V+E   +  +  VQ       P R  F  ++   +R G    AR  F  M  RGI+
Sbjct: 262 DFRKVLETEPENWQAVVQAFERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIE 321

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
                Y +L+ A   G  M+ A   + +M  + I  ++VTYS ++ G+AK    + A + 
Sbjct: 322 PTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHW 381

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F E K     L+ + Y  ++  + +     +A  + +EME  GI      Y+ ++ GY  
Sbjct: 382 FKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTI 441

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G  ++   +F+++K    +P++++Y  LI++Y K G   +A+++ +  + AG+K ++  
Sbjct: 442 IGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKT 501

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           YS LI+   +     +A ++ +++ K+G++P+VV YN+II AF       C + +++R +
Sbjct: 502 YSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAF-------CGMGNMDRAI 554

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
              KE         Q ++  +   RT   II  F      ++G  ++           L 
Sbjct: 555 RTVKE--------MQKERH-RPTTRTFMPIIHGFA-----RSGDMRR----------ALE 590

Query: 632 VFQKMHKLKIKPNVVTFSA-ILNACSRCNSFEDASMLLEELRL 673
           +F  M      P V TF+A IL    +C   E A  +L+E+ L
Sbjct: 591 IFDMMRWSGCIPTVHTFNALILGLVEKCQ-MEKAVEILDEMSL 632


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 186/366 (50%), Gaps = 1/366 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           AS ++    + G+V  A+ + +     G       +++L+ AY R         +   M+
Sbjct: 146 ASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVME 205

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              ++P + TY  ++D       D   V  +F++M    +  D   ++S++    R G  
Sbjct: 206 NEGIEPTVGTYTILVDGL-SAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNV 264

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  +F+E V  GI+ +  TY  L++  CK  QM+ A  ++ +M  + +  N + ++TM
Sbjct: 265 RRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTM 324

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDGY +   +D AL +   M+ +GI LD  +YNT+     +  R +EA  + + M   G+
Sbjct: 325 IDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGV 384

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R + V+Y  L+  +  +G   E RR+F +M  +   P+L+TY+ ++D Y K G  +EA +
Sbjct: 385 RPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAER 444

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
              E ++ GL  D+  Y+AL+   C NG V+ A+ L +EM + G +PN+V Y ++I    
Sbjct: 445 FKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLA 504

Query: 556 RSATTE 561
           +   +E
Sbjct: 505 KEGRSE 510



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 181/345 (52%), Gaps = 1/345 (0%)

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
           D    + +   NEG   TV  ++ L+     +    +  +VF  MK  NL  ++  Y++V
Sbjct: 195 DRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSV 254

Query: 270 IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
           I+A  + G + +   E+FD+ + NG++P+  T+ +L+    + G  EAA  L  +M  RG
Sbjct: 255 INAYCRAG-NVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 313

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  +   +NT++D  C+   +D A EI   M    I  +V TY+T+  G  +A R+D+A 
Sbjct: 314 VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAK 373

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
           N+   M   G+  + VSY T++SI+   G   EA  + +EM  +G     VTYN ++ GY
Sbjct: 374 NLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGY 433

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            K+G   E  R   +M+   + P++ +Y+ L+  +   G    A+++F E KQ G K ++
Sbjct: 434 IKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNL 493

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           V Y+ALI  L K G  E A  L D M  +G+ P+   Y++++ + 
Sbjct: 494 VAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 538



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 167/377 (44%), Gaps = 36/377 (9%)

Query: 382 AGRLDDALNMFSEMKF-LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           AG LD A ++  +        +  +S + V+  Y K GR   A  +  EM   G++ +A+
Sbjct: 120 AGHLDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNAL 179

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
            YN+LL  Y ++   D V  M + M+ + + P + TY+ L+D  S      +   +F E 
Sbjct: 180 CYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM 239

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           K   L  DV  YS++I+A C+ G V  A  + DE    GI PN  TY ++I+ F      
Sbjct: 240 KSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGF------ 293

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
            C +         Q E+A +         D+Q  G   NQI  VF  ++         + 
Sbjct: 294 -CKI--------GQMEAAEMLV------TDMQVRGVGINQI--VFNTMI---------DG 327

Query: 621 RCRQEIL-CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVY 679
            CR+ ++   L +   M K+ I+ +V T++ +     R N  ++A  LL  +     +  
Sbjct: 328 YCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPN 387

Query: 680 GVAHGLLMGYRDN--IWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVL 737
            V++  L+    N    V+A  LF E+    +  +   YN + D     G  R A+    
Sbjct: 388 HVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKN 447

Query: 738 EGKRRQVWENVWSESCL 754
           E +++ +  +++S + L
Sbjct: 448 EMEKKGLVPDIYSYAAL 464



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GKVD+A  +FE     G    + A++ALIS   + G  +EA  ++++M    L P+   Y
Sbjct: 472 GKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALY 531

Query: 267 NAVI 270
           +A++
Sbjct: 532 SALV 535


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 190/363 (52%), Gaps = 5/363 (1%)

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
           ++ RL     A   +   L+ G       F+ L+  + R G    A  VF+ M+R +++P
Sbjct: 160 LMSRLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRR-SVQP 218

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
            +VT+N +I    +   D   V  ++ +M   GV+PD  T+ +L+    R G  E A  +
Sbjct: 219 TVVTFNTLISGMCRAR-DLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKM 277

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           FNEM   G++ +   + TL+DA CK   ++   ++  +M  + + P++V Y+ +++G  +
Sbjct: 278 FNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCR 337

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           A  L  A ++  EMK  G+  D+V+Y T++    K G+ + A+ + ++M    +  D VT
Sbjct: 338 ARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVT 397

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y AL+ G  K G+  +  R+  +M    + P+  TY+ +ID + + G  K   ++ +E +
Sbjct: 398 YTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQ 457

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGRSA 558
             G K  VV Y+ +++ LCK G +++A  LL  M   G+ P+ +TYN ++D     G+ A
Sbjct: 458 NKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVA 517

Query: 559 TTE 561
            +E
Sbjct: 518 NSE 520



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 188/364 (51%), Gaps = 5/364 (1%)

Query: 191 DQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISV 250
           D   L S + +     G +  A ++   AL  G        S L+S   R     EA + 
Sbjct: 117 DPAPLVSELAAAYADEGLLPDACSLVLLALRRGISLPAPVCSGLMS---RLPSTPEAYTF 173

Query: 251 FNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCS 310
           +  +    + P    +N ++    + G +     ++FD+M R  VQP  +TFN+L++   
Sbjct: 174 YLQLLDAGMAPETRLFNVLMRDFVRLG-ELVSARKVFDEM-RRSVQPTVVTFNTLISGMC 231

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           R    +A   L+ EM   G+  D++TY  L+   C+  +M+ A ++  EM    ++PN V
Sbjct: 232 RARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAV 291

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
            ++T+ID + K G ++  ++++ +M+  G+  D V+YN +++   +    + A  + +EM
Sbjct: 292 VFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEM 351

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           +++G++ D VTY  L+ G  K GK D    + ++M    VS + +TY+ LI   SK G  
Sbjct: 352 KNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRP 411

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            +A ++ RE  +A L+ D   Y+ +IDA C+ G V++   LL EM  +G +P VVTYN I
Sbjct: 412 VDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVI 471

Query: 551 IDAF 554
           ++  
Sbjct: 472 MNGL 475



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 187/365 (51%), Gaps = 5/365 (1%)

Query: 192 QGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF 251
           + +L + ++    RLG++  A+ +F+  +      TV  F+ LIS   R+        ++
Sbjct: 185 ETRLFNVLMRDFVRLGELVSARKVFDE-MRRSVQPTVVTFNTLISGMCRARDLDAVDGLY 243

Query: 252 NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
             M    +KP++ TY A+I    + G   ++ V++F++M   GV P+ + F +L+    +
Sbjct: 244 KEMSDVGVKPDVYTYGALIKGFCRTG-RMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCK 302

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            G   A  +L+ +M  RG+  D+  YN L++ +C+   +  A  I+ EM    + P+ VT
Sbjct: 303 EGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVT 362

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+T+IDG  K G+LD A+++  +M    + LD V+Y  ++S  +K GR  +A  V +EM 
Sbjct: 363 YTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMM 422

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            + +  D  TY  ++  + ++G      ++ ++M+     P ++TY+ +++   K G  K
Sbjct: 423 EAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMK 482

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            A  +       G+  D + Y+ L+D  CK+G V ++  L    + +G+ P+   Y S+I
Sbjct: 483 NADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL---ESSKGMVPDFAVYTSLI 539

Query: 552 DAFGR 556
               +
Sbjct: 540 SELAK 544



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/355 (24%), Positives = 169/355 (47%), Gaps = 34/355 (9%)

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A   + +++  G+  +   +N L+    +  ++  A ++  EM  +++ P VVT++T+I 
Sbjct: 170 AYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLIS 228

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  +A  LD    ++ EM  +G+  D  +Y  ++  + + GR E A+ +  EM  +G+  
Sbjct: 229 GMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNP 288

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +AV +  L+  + K+G  +    +++ M+   V P+L+ Y+ L++   +    K A  I 
Sbjct: 289 NAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIV 348

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E K AGLK D V Y+ LID  CK+G ++ A+ +  +M ++ +  + VTY ++I    ++
Sbjct: 349 EEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKA 408

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
                   D ER L +  E+A            ++    T   +I  F            
Sbjct: 409 GRPV----DAERVLREMMEAA------------LEPDNTTYTMVIDAF------------ 440

Query: 618 KENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               CR+ ++     + ++M     KP VVT++ I+N   +    ++A MLL  +
Sbjct: 441 ----CRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAM 491



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 158/338 (46%), Gaps = 10/338 (2%)

Query: 118 STRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSKA 175
           S + +VV    L      ARD  ++  + K+        D YT+  L++     G    A
Sbjct: 215 SVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENA 274

Query: 176 IQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALI 235
           ++   F   R+   N    + + +I    + G V+   ++++     G    + A++AL+
Sbjct: 275 VK--MFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALV 332

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV 295
           +   R+   + A S+   MK   LKP+ VTY  +ID C K G      ++I   M    V
Sbjct: 333 NGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDG-KLDMAMDIKQKMAEKEV 391

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
             D +T+ +L++  S+ G    A  +  EM+   ++ D  TY  ++DA C+   +   F+
Sbjct: 392 SLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFK 451

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++ EM  K   P VVTY+ +++G  K G++ +A  +   M  +G+  D ++YN +L    
Sbjct: 452 LLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQC 511

Query: 416 KLGRFEEALLVCKEMESS-GIRKDAVTYNALLGGYGKQ 452
           K G+   +    +E+ESS G+  D   Y +L+    K+
Sbjct: 512 KHGKVANS----EELESSKGMVPDFAVYTSLISELAKK 545


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 229/478 (47%), Gaps = 32/478 (6%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDF 280
           +G    ++  + LI+ +   G      SV   + +    P+ VT N +I   C KG V  
Sbjct: 336 KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQV-- 393

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           K  +   D +L  G Q +++++ +L+    + G    A  L  ++  R    ++  Y+T+
Sbjct: 394 KKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTI 453

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +DA+CK   +  A+ + +EM  K IS +VVTYST+I G+   G+L +A+ + +EM    I
Sbjct: 454 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTI 513

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D  +Y  ++    K G+ +EA  V   M  + ++ D  TYN L+ GY    +  + + 
Sbjct: 514 NPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQH 573

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F  M    V+P++ TY+ LI+ + K  +  EA+ +F+E  Q  +  D V YS+L+D LC
Sbjct: 574 VFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLC 633

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESA 578
           K+G +     L+DEM   G   +V+TYNS+ID   ++   +  +   +  +D G +  + 
Sbjct: 634 KSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTF 693

Query: 579 N----LDAMCSQDD-KDVQEA-----GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
                LD +C     KD QE       +  +  + ++  ++     QG  E         
Sbjct: 694 TFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEA------- 746

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
            L +  KM +    PN VTF  I+NA  + +  + A  LL ++         +A GLL
Sbjct: 747 -LTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQM---------IARGLL 794



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 191/386 (49%), Gaps = 11/386 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  +   G+   AI+       R  + N +  + S +I  L +   V  A  +F  
Sbjct: 415 YATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVE--MYSTIIDALCKYQLVSEAYGLFSE 472

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G    V  +S LI  +   G  +EAI + N M    + P++ TY  ++DA GK G 
Sbjct: 473 MTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEG- 531

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW----EAARNLFNEMVHRGIDQDI 334
             K    +   ML+  V+PD  T+N+L+     G L     + A+++FN M   G+  D+
Sbjct: 532 KVKEAKSVLAVMLKACVKPDVFTYNTLM----NGYLLVYEVKKAQHVFNAMSLMGVTPDV 587

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TY  L++  CK   +D A  +  EM  KN+ P+ VTYS+++DG  K+GR+    ++  E
Sbjct: 588 HTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDE 647

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M+  G   D ++YN+++    K G  ++A+ +  +M+  GIR +  T+  LL G  K G+
Sbjct: 648 MRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGR 707

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
             + + +F+ +       ++  Y+ +I  + K GL +EA+ +  + ++ G   + V +  
Sbjct: 708 LKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDI 767

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGI 540
           +I+AL K    + A  LL +M   G+
Sbjct: 768 IINALFKKDENDKAEKLLRQMIARGL 793



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 152/642 (23%), Positives = 276/642 (42%), Gaps = 90/642 (14%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  +   G+   AI+       R  + N +  + + +I  L +   V  A  +F  
Sbjct: 101 YATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVE--MYNTIIDALCKYQLVSEAYGLFSE 158

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
              +G    V  +S LI  +   G  +EA+ + N M    + PN+ TYN ++DA C +G 
Sbjct: 159 MTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGK 218

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           V  K    +   ML+  V+ + IT+++L+         + A+++FN M   G+  D+ +Y
Sbjct: 219 V--KEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSY 276

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N +++  CK  ++D A  +  EM      P ++ ++ ++D +AK      A+++   ++ 
Sbjct: 277 NIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLEL 335

Query: 398 LGIGLDRVSYNTVL-------------SIYAKL----------------------GRFEE 422
            GI  D  + N ++             S+ AK+                      G+ ++
Sbjct: 336 KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKK 395

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           AL    ++ + G + + V+Y  L+ G  K G      ++  ++      PN+  YST+ID
Sbjct: 396 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 455

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
              K  L  EA  +F E    G+ ADVV YS LI   C  G ++ A+ LL+EM  + I P
Sbjct: 456 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINP 515

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM----CSQDDKDVQEAGRTD 598
           +V TY  ++DA G+               GK KE+ ++ A+    C + D        T 
Sbjct: 516 DVRTYTILVDALGKE--------------GKVKEAKSVLAVMLKACVKPDV------FTY 555

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
           N ++   G L+  +  + +              VF  M  + + P+V T++ ++N   + 
Sbjct: 556 NTLMN--GYLLVYEVKKAQH-------------VFNAMSLMGVTPDVHTYTILINGFCKS 600

Query: 659 NSFEDASMLLEELR----LFDNQVY-GVAHGLLMGYRDN-IWVQALSLFDEVKLMDSSTA 712
              ++A  L +E+     + D   Y  +  GL    R + +W     L DE++       
Sbjct: 601 KMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVW----DLIDEMRDRGQPAD 656

Query: 713 SAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
              YN+L D L   G    A  +  + K + +  N ++ + L
Sbjct: 657 VITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTIL 698



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 148/587 (25%), Positives = 258/587 (43%), Gaps = 91/587 (15%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V  A +  +  L +G+     +++ LI+   R G  + AI     +     KPN+  Y
Sbjct: 77  GQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMY 136

Query: 267 NAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
           N +IDA  K    ++ V E   +F +M   G+  + +T+++L+   C  G L EA   L 
Sbjct: 137 NTIIDALCK----YQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEAL-GLL 191

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           N MV + I+ ++ TYN L+DA+CK  ++  A  ++A M    +  NV+TYST++DGY   
Sbjct: 192 NVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLV 251

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM------------ 430
             +  A ++F+ M  +G+  D  SYN +++ + K+ R ++AL + KEM            
Sbjct: 252 YEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFN 311

Query: 431 ----------------------ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
                                 E  GI+ D  T N L+  +   G+      +  ++   
Sbjct: 312 KILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKR 371

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
              P+ +T +TLI      G  K+A+    +    G + + V Y+ LI+ +CK G    A
Sbjct: 372 GYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGA 431

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT--------TECTVDDVERD---------- 570
           + LL ++     +PNV  Y++IIDA  +           +E TV  +  D          
Sbjct: 432 IKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYG 491

Query: 571 ---LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK-KENRCRQEI 626
              +GK KE+  L           +   +T N  ++ +  LV     +GK KE +     
Sbjct: 492 FCIVGKLKEAIGLLN---------EMVLKTINPDVRTYTILVDALGKEGKVKEAK----- 537

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYGVA 682
                V   M K  +KP+V T++ ++N        + A  +   + L     D   Y + 
Sbjct: 538 ----SVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTI- 592

Query: 683 HGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
             L+ G+ +  +  +AL+LF E+   +    +  Y++L D L   G+
Sbjct: 593 --LINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGR 637



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 134/548 (24%), Positives = 256/548 (46%), Gaps = 53/548 (9%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++  L + GKV  AK++    L     + V  +S L+  Y      ++A  VFN+M    
Sbjct: 209 LVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 268

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           + P++ +YN +I+  C    VD    + +F +M+ +   P  I FN +L   ++   +  
Sbjct: 269 VTPDVHSYNIMINGFCKIKRVD--KALNLFKEMILSRFPP-IIQFNKILDSFAKMKHYST 325

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A +L + +  +GI  D+FT N L++  C   Q+   F ++A++  +   P+ VT +T+I 
Sbjct: 326 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIK 385

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G    G++  AL+   ++   G  L++VSY T+++   K+G    A+ + ++++    + 
Sbjct: 386 GLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKP 445

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +   Y+ ++    K     E   +F +M    +S +++TYSTLI  +   G  KEA+ + 
Sbjct: 446 NVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLL 505

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E     +  DV  Y+ L+DAL K G V+ A S+L  M K  ++P+V TYN++++ +   
Sbjct: 506 NEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGY--- 562

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQD-DKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
                 V +V      +K     +AM       DV       N   K   ++V E     
Sbjct: 563 ----LLVYEV------KKAQHVFNAMSLMGVTPDVHTYTILINGFCK--SKMVDEA---- 606

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR---- 672
                        L +F++MH+  + P+ VT+S++++   +         L++E+R    
Sbjct: 607 -------------LNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQ 653

Query: 673 -----LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
                 +++ + G+      G+ D    +A++LF+++K       +  +  L D L   G
Sbjct: 654 PADVITYNSLIDGLCKN---GHLD----KAIALFNKMKDQGIRPNTFTFTILLDGLCKGG 706

Query: 728 QKRGAQLV 735
           + + AQ V
Sbjct: 707 RLKDAQEV 714



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 145/274 (52%), Gaps = 3/274 (1%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           + +   +L+ G  PD +T N+L+  +C +G + EA  +  ++++ +G   +  +Y TL++
Sbjct: 48  LSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEAL-HFHDKLLAQGFQLNQVSYATLIN 106

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            +C+      A + + ++  +   PNV  Y+T+ID   K   + +A  +FSEM   GI  
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           + V+Y+T++  +  +G+ +EAL +   M    I  +  TYN L+    K+GK  E + + 
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
             M   CV  N++TYSTL+D Y      K+A  +F      G+  DV  Y+ +I+  CK 
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKI 286

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             V+ A++L  EM      P ++ +N I+D+F +
Sbjct: 287 KRVDKALNLFKEMILSRFPP-IIQFNKILDSFAK 319



 Score = 42.7 bits (99), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 30/193 (15%)

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           ++ +  +  + G   D V  + LI  LC  G V+ A+   D++  +G + N V+Y ++I+
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 553 AFGRSATTECTVDDVERDLGK------QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG 606
              R   T   +  + +  G+      +  +  +DA+C    + V EA          +G
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKY--QLVSEA----------YG 154

Query: 607 QLVAEKAGQGKKENRCRQEIL----CI-------LGVFQKMHKLKIKPNVVTFSAILNAC 655
            L +E   +G   N      L    CI       LG+   M    I PNV T++ +++A 
Sbjct: 155 -LFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDAL 213

Query: 656 SRCNSFEDASMLL 668
            +    ++A  +L
Sbjct: 214 CKEGKVKEAKSVL 226


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 175/355 (49%), Gaps = 1/355 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L R G  +    +    ++ G    +  ++ ++    + G+ + A  + + M  
Sbjct: 264 NTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS 323

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           Y LKPN+V YN V+         ++   E+  +M  N    D +TFN L+    + GL  
Sbjct: 324 YGLKPNVVCYNTVLKGLCSAE-RWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               L  +M+  G   D+ TY T+++  CK   +D A  ++  M A    PN ++Y+ ++
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G   A R  DA ++ S+M   G   + V++NTV++   K G  E+A+ + K+M  +G  
Sbjct: 443 KGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCS 502

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D ++Y+ ++ G GK GK DE   +   M    +SPN + YS++    SK G     +Q+
Sbjct: 503 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQM 562

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           F   +   +++D VLY+A+I +LCK G  + A+  L  M   G  PN  TY  +I
Sbjct: 563 FDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILI 617



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 182/347 (52%), Gaps = 13/347 (3%)

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVTYNAVIDACGKGG 277
           AL+ G  N V     L +   + G   EA+ +   +   +   P++V+YNAV+    KG 
Sbjct: 185 ALDVGNCNLV-----LNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL----KGL 235

Query: 278 VDFKH---VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
              K    V ++ ++M+R G  P+ +TFN+L+    R GL+E    +  +MV  G   DI
Sbjct: 236 CMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDI 295

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
             Y T+LD +CK   +++A EI+  MP+  + PNVV Y+T++ G   A R + A  + +E
Sbjct: 296 RMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAE 355

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M      LD V++N ++  + + G     + + ++M   G   D +TY  ++ G+ K+G 
Sbjct: 356 MFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGL 415

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            DE   + + M A    PN ++Y+ ++        + +A  +  +  + G   + V ++ 
Sbjct: 416 IDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNT 475

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +I+ LCK GLVE A+ LL +M   G  P++++Y+++ID  G++  T+
Sbjct: 476 VINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTD 522



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 175/358 (48%), Gaps = 6/358 (1%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G+V   +++ E  +  G    V  F+ LI    R+G  +    V   M  +   P++ 
Sbjct: 240 RWGRV---QDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIR 296

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            Y  V+D  C +G ++  H  EI D M   G++P+ + +N++L        WE A  L  
Sbjct: 297 MYATVLDGVCKEGHLEVAH--EILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLA 354

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EM       D  T+N L+D  C+   +    E++ +M      P+V+TY+T+I+G+ K G
Sbjct: 355 EMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEG 414

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            +D+A+ +   M   G   + +SY  VL       R+ +A  +  +M   G   + VT+N
Sbjct: 415 LIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFN 474

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            ++    K+G  ++   + +QM  +  SP+L++YST+ID   K G   EA+++       
Sbjct: 475 TVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK 534

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           G+  + ++YS++  AL K G +   + + D +    IR + V YN++I +  +   T+
Sbjct: 535 GMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTD 592



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 235/511 (45%), Gaps = 59/511 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +AM+S   R G++  A+ +   A +       Y +  ++ A    G   +A+SV + M+R
Sbjct: 87  NAMVSGYCRAGQLASARRL---AASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRR 143

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVD-FKHVVEIFDDM------------------------ 290
               P    Y+ +++A C +GG   F+  V +  D+                        
Sbjct: 144 RGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGG 203

Query: 291 --------LRN-----GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
                   LR+     G  PD +++N++L        W   ++L  EMV  G   ++ T+
Sbjct: 204 SVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTF 263

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           NTL+  +C+    +   +++A+M     +P++  Y+T++DG  K G L+ A  +   M  
Sbjct: 264 NTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS 323

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  + V YNTVL       R+E+A  +  EM  +    D VT+N L+  + + G    
Sbjct: 324 YGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYR 383

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
           V  + EQM      P+++TY+T+I+ + K GL  EA+ + +     G + + + Y+ ++ 
Sbjct: 384 VIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLK 443

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            LC       A  L+ +M ++G  PN VT+N++I+   +    E  ++ +++ L     S
Sbjct: 444 GLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQML-LNGCS 502

Query: 578 ANLDAMCSQDDKDVQEAGRTDN--QIIKVFGQ--------LVAEKAGQGKKENRCRQEIL 627
            +L +  +  D  + +AG+TD   +++ V           + +  A    KE R  +   
Sbjct: 503 PDLISYSTVID-GLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINR--- 558

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNA-CSR 657
            ++ +F  +  + I+ + V ++A++++ C R
Sbjct: 559 -VIQMFDNIQDVTIRSDAVLYNAVISSLCKR 588



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 169/332 (50%), Gaps = 11/332 (3%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           ++A++S Y R+G    A  +  S+    + PN  TY  V+ A C +G +     + + D+
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRI--ADALSVLDE 140

Query: 290 MLRNGVQPDRITFNSLL-AVCSR--GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC- 345
           M R G  P    ++ +L A CSR  GG + +A  +  ++  RG   D+   N +L+A+C 
Sbjct: 141 MRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCD 200

Query: 346 KGAQMDLAFEIMAEMPAK-NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           +G  +D A  ++ ++P      P+VV+Y+ ++ G   A R     ++  EM  +G   + 
Sbjct: 201 QGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNV 260

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V++NT++    + G FE    V  +M   G   D   Y  +L G  K+G  +    + ++
Sbjct: 261 VTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDR 320

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M +  + PN++ Y+T++        +++A ++  E        D V ++ L+D  C+NGL
Sbjct: 321 MPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGL 380

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           V   + LL++M + G  P+V+TY ++I+ F +
Sbjct: 381 VYRVIELLEQMLEHGCVPDVITYTTVINGFCK 412



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 100/438 (22%), Positives = 186/438 (42%), Gaps = 86/438 (19%)

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YN ++   C+  Q+  A  + A +P   + PN  TY  ++      GR+ DAL++  EM+
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 397 F--------------------------------------LGIGLDRVSYNTVL-SIYAKL 417
                                                   G  LD  + N VL ++  + 
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 418 GRFEEALLVCKEMESS-GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
           G  +EAL + +++ +S G   D V+YNA+L G     ++  V+ + E+M      PN++T
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           ++TLI    + GL++   Q+  +    G   D+ +Y+ ++D +CK G +E A  +LD M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
             G++PNVV YN+++          C+ +  E+   ++  +   D  C  DD        
Sbjct: 323 SYGLKPNVVCYNTVLKGL-------CSAERWEQ--AEELLAEMFDNDCPLDDV------- 366

Query: 597 TDNQIIKVFGQ--LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
           T N ++  F Q  LV                   ++ + ++M +    P+V+T++ ++N 
Sbjct: 367 TFNILVDFFCQNGLVYR-----------------VIELLEQMLEHGCVPDVITYTTVING 409

Query: 655 CSRCNSFEDASMLLEELRLFDNQVYGVAH-----GLLMGYRDNIWVQALSLFDEVKLMDS 709
             +    ++A MLL+ +     +   +++     GL    R   WV A  L  ++     
Sbjct: 410 FCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAER---WVDAEDLMSQMIEQGC 466

Query: 710 STASAFYNALTDMLWHFG 727
           S     +N + + L   G
Sbjct: 467 SPNPVTFNTVINFLCKKG 484


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 185/364 (50%), Gaps = 7/364 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L +LG+V  A  +       G    V ++S +I+ Y + G  Q  + +   M+   LKPN
Sbjct: 263 LCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPN 322

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
             TYN VI    K G        +  +M+  G+ PD + + +L+   C  G +  A R L
Sbjct: 323 PYTYNGVILLLCKTG-KVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYR-L 380

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F+EM  R I  D  TY  ++  +C+  ++  A ++  EM  K + P+ VTY+ +IDGY K
Sbjct: 381 FDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCK 440

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G++ +A ++ ++M  +G+  + V+Y  +     K G  + A  +  EM   G+  +  T
Sbjct: 441 EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT 500

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN+L+ G  K G  D+  ++ + M+     P+ +TY+TL+D Y K      A ++ R+  
Sbjct: 501 YNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQML 560

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF----GRS 557
              L+  VV ++ L++  C +G++E    LL  M ++GI PN  TYNS+I  +       
Sbjct: 561 DRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMR 620

Query: 558 ATTE 561
           ATTE
Sbjct: 621 ATTE 624



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 183/359 (50%), Gaps = 3/359 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I +L + GKV  A+ +    ++EG       ++ LI  + + G    A  +F+ M++
Sbjct: 327 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 386

Query: 257 YNLKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + P+ +TY AVI   C  G V      ++F +M+   ++PD +T+ +L+    + G  
Sbjct: 387 RKISPDFITYTAVICGLCQTGRV--MEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 444

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A +L N+M+  G+  +I TY  L D +CK  ++D A E++ EM  K +  N+ TY+++
Sbjct: 445 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 504

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ++G  KAG +D A+ +  +M+  G   D V+Y T++  Y K      A  + ++M    +
Sbjct: 505 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 564

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           +   VT+N L+ G+   G  ++  ++ + M    + PN  TY++LI  Y      +   +
Sbjct: 565 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 624

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           I+R     G+  D   Y+ LI   CK   ++ A  L  +M  +G    V +YN++I  F
Sbjct: 625 IYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGF 683



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 185/357 (51%), Gaps = 3/357 (0%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           L  + +A  +F      G      +++ +  +  + G   EA  +   M+     P++++
Sbjct: 231 LDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVIS 290

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS-LLAVCSRGGLWEAARNLFNE 324
           Y+ VI+   + G + + V+++ ++M   G++P+  T+N  +L +C  G + EA R L  E
Sbjct: 291 YSTVINGYCQVG-ELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVL-RE 348

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+  GI  D   Y TL+D  CK   +  A+ +  EM  + ISP+ +TY+ +I G  + GR
Sbjct: 349 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGR 408

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           + +A  +F EM    +  D V+Y  ++  Y K G+ +EA  +  +M   G+  + VTY A
Sbjct: 409 VMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTA 468

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L  G  K G+ D    +  +M    +  N+ TY++L++   K G   +A+++ ++ + AG
Sbjct: 469 LADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 528

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
              D V Y+ L+DA CK+  +  A  LL +M    ++P VVT+N +++ F  S   E
Sbjct: 529 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLE 585



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 214/448 (47%), Gaps = 35/448 (7%)

Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV 283
           +G+    F         +G   EA  +F+ M  Y L  ++ + N  I    +     K  
Sbjct: 178 WGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIA 237

Query: 284 VEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           +++F +    GV  +  ++N +  ++C  G + EA   L  +M  RG   D+ +Y+T+++
Sbjct: 238 LKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEA-HQLLLQMELRGCIPDVISYSTVIN 296

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
             C+  ++    +++ EM  K + PN  TY+ +I    K G++ +A  +  EM   GI  
Sbjct: 297 GYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAP 356

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D V Y T++  + KLG    A  +  EM+   I  D +TY A++ G  + G+  E  ++F
Sbjct: 357 DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLF 416

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +M    + P+ +TY+ LID Y K G  KEA  +  +  Q GL  ++V Y+AL D LCK 
Sbjct: 417 HEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC 476

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           G V++A  LL EM ++G+  N+ TYNS+++   ++   +  V  +               
Sbjct: 477 GEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLM--------------- 521

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKI 641
                 KD++ AG   + +   +  L+         +  C+ +E++    + ++M   ++
Sbjct: 522 ------KDMEVAGFHPDAV--TYTTLM---------DAYCKSREMVRAHELLRQMLDREL 564

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLE 669
           +P VVTF+ ++N        ED   LL+
Sbjct: 565 QPTVVTFNVLMNGFCMSGMLEDGEKLLK 592



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 178/373 (47%), Gaps = 1/373 (0%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G + + +I    +LG V  A  +F+             ++A+I    ++G   EA  +F+
Sbjct: 358 GVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFH 417

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            M    L+P+ VTY A+ID   K G   K    + + ML+ G+ P+ +T+ +L     + 
Sbjct: 418 EMVCKRLEPDEVTYTALIDGYCKEG-KMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC 476

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  + A  L +EM  +G++ +I+TYN+L++ +CK   +D A ++M +M      P+ VTY
Sbjct: 477 GEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 536

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T++D Y K+  +  A  +  +M    +    V++N +++ +   G  E+   + K M  
Sbjct: 537 TTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE 596

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            GI  +A TYN+L+  Y  +        ++  M A  V P+  TY+ LI  + K    KE
Sbjct: 597 KGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKE 656

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A  + R+    G    V  Y+ALI    K      A  L ++M +EG+  +   YN   D
Sbjct: 657 AWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 716

Query: 553 AFGRSATTECTVD 565
                   E T++
Sbjct: 717 INYDEGKMELTLE 729



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 188/392 (47%), Gaps = 5/392 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+      G  S A + F    KR  + +      +A+I  L + G+V  A  +F  
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKR--KISPDFITYTAVICGLCQTGRVMEADKLFHE 418

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            + +        ++ALI  Y + G  +EA S+ N M +  L PN+VTY A+ D  C  G 
Sbjct: 419 MVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE 478

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           VD  +  E+  +M R G++ +  T+NSL+    + G  + A  L  +M   G   D  TY
Sbjct: 479 VDTAN--ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 536

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TL+DA CK  +M  A E++ +M  + + P VVT++ +++G+  +G L+D   +   M  
Sbjct: 537 TTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE 596

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI  +  +YN+++  Y           + + M + G+  D  TYN L+ G+ K     E
Sbjct: 597 KGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKE 656

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +   M     +  + +Y+ LI  + K   + EA ++F + ++ GL AD  +Y+   D
Sbjct: 657 AWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 716

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
                G +E  + L DE  ++ +  ++ T N+
Sbjct: 717 INYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748


>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 181/342 (52%), Gaps = 4/342 (1%)

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL--KPNLVTYNAVIDACGKGGVDFKHV 283
           + V   +AL+ A  R G  + A ++   M R     + ++V +NA++D   K G D +  
Sbjct: 163 DAVTVNTALV-ALCRDGQVEGAAALAEMMVRGREIHRLDVVGWNALLDGYCKSG-DMEAA 220

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           +     M   GV  D + +N+L+A   R G  +AAR +   M   G++ ++ TY T +  
Sbjct: 221 LTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAE 280

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C+   +D AF +  EM    + P+VVT S ++DG  +AGR  +A  +F EM+ +G   +
Sbjct: 281 CCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPN 340

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V+Y T++    K  R  E+  +  E+ S G+  D V Y +L+   GKQGK DEV+ MF 
Sbjct: 341 HVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFH 400

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
              +D  +PN +TY+ LID   + G    A Q+  E +   +  +VV +S++I+ L K G
Sbjct: 401 CALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQG 460

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           L+  A   + +M + GI PNVVTY +++D F +    E  +D
Sbjct: 461 LLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALD 502



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 188/371 (50%), Gaps = 14/371 (3%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +++ L R G+ D A+ + ET   +G    V  ++  I+   R+    +A S++  M R  
Sbjct: 242 LVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMG 301

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           + P++VT +A++D   + G  F     +F +M + G  P+ +T+ +L+       LW+A 
Sbjct: 302 VLPDVVTLSALVDGLCRAG-RFSEAYALFREMEKIGAAPNHVTYCTLI-----DSLWKAR 355

Query: 319 RN-----LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           R      L  E+V RG+  D+  Y +L+D + K  ++D   ++     + N +PN VTY+
Sbjct: 356 RGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYT 415

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +ID   +AG +D A  M  EM+   +  + V+++++++   K G   +A    ++M+  
Sbjct: 416 VLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKER 475

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI  + VTY  ++ G+ K  + +    ++ +M  + V  N      L++   K G  +EA
Sbjct: 476 GIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEA 535

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             +FR+  + G+  D V Y+ LID L K G + +A  +  E+T+  + P+ V YN  ++ 
Sbjct: 536 EALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNC 595

Query: 554 ---FGRSATTE 561
               G+S   E
Sbjct: 596 LCMLGKSKEAE 606



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 177/349 (50%), Gaps = 3/349 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G ++ A    +    +G G  V  ++ L++   R+G    A  +  +MK   ++PN+VTY
Sbjct: 215 GDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTY 274

Query: 267 NAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
              I + C    VD      ++++M+R GV PD +T ++L+    R G +  A  LF EM
Sbjct: 275 TTFIAECCRTNAVD--DAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREM 332

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              G   +  TY TL+D++ K  +   +  ++ E+ ++ +  ++V Y++++D   K G++
Sbjct: 333 EKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKI 392

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D+  +MF          + V+Y  ++    + G  + A  +  EME   +  + VT++++
Sbjct: 393 DEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSI 452

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  KQG   +      +MK   + PN++TY T++D + K    + A+ ++ E    G+
Sbjct: 453 INGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGV 512

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + +  +   L++ L KNG +E A +L  +M K G+  + V Y ++ID  
Sbjct: 513 EVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGL 561



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 208/496 (41%), Gaps = 76/496 (15%)

Query: 295 VQPDRITFNS-LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC-KGAQMDL 352
           V  D ++ NS LL+ C+   L  A       ++      D  +YN ++  +  +G    L
Sbjct: 93  VPGDPLSLNSILLSHCALRSLRPAL-----ALLRASESADTVSYNVVISGLTEQGRHGGL 147

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG---LDRVSYNT 409
           A  ++AEM  + +  + VT +T +    + G+++ A  + +EM   G     LD V +N 
Sbjct: 148 APALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAAL-AEMMVRGREIHRLDVVGWNA 206

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +L  Y K G  E AL   + M + G+  D V YN L+ G  + G+ D  R M E MK D 
Sbjct: 207 LLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDG 266

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           V PN++TY+T I    +     +A  ++ E  + G+  DVV  SAL+D LC+ G    A 
Sbjct: 267 VEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAY 326

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAF-------------GRSATTECTVDDVERD-----L 571
           +L  EM K G  PN VTY ++ID+              G   +    +D V        L
Sbjct: 327 ALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWL 386

Query: 572 GKQKE-----------------------SANLDAMCSQDDKDVQEA------GRTDNQII 602
           GKQ +                       +  +DA+C   + D  E        ++ +  +
Sbjct: 387 GKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNV 446

Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCILG----VFQKMHKLKIKPNVVTFSAILNACSRC 658
             F  ++     QG            +LG      +KM +  I PNVVT+  +++   +C
Sbjct: 447 VTFSSIINGLTKQG------------LLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKC 494

Query: 659 NSFEDASMLLEELRLFDNQVYGVAHGLLM-GYRDNIWV-QALSLFDEVKLMDSSTASAFY 716
              E A  L  E+     +V      LL+ G R N  + +A +LF ++           Y
Sbjct: 495 QEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNY 554

Query: 717 NALTDMLWHFGQKRGA 732
             L D L+  G    A
Sbjct: 555 TTLIDGLFKMGNMPAA 570



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 110/230 (47%), Gaps = 3/230 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  LG +G+  +    F  A+      N  G   + +I  L R G VD A+ +   
Sbjct: 379 YTSLMDWLGKQGKIDEVKDMFHCALSDNHTPN--GVTYTVLIDALCRAGNVDGAEQMLLE 436

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             ++     V  FS++I+   + G   +A      MK   + PN+VTY  V+D   K   
Sbjct: 437 MEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQ- 495

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           + +  ++++ +ML  GV+ ++   + L+    + G  E A  LF +M  RG+  D   Y 
Sbjct: 496 EQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYT 555

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           TL+D + K   M  AF++  E+  +N+SP+ V Y+  ++     G+  +A
Sbjct: 556 TLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEA 605



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 165/380 (43%), Gaps = 35/380 (9%)

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           ++F  +  D +S N++L  +  L     AL + +  ES+    D V+YN ++ G  +QG+
Sbjct: 88  VRFRPVPGDPLSLNSILLSHCALRSLRPALALLRASESA----DTVSYNVVISGLTEQGR 143

Query: 455 YDEVR-RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK------EAMQIFREFKQAGLKA 507
           +  +   +  +M    V  + +T +T +    + G  +      E M   RE      + 
Sbjct: 144 HGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAALAEMMVRGREIH----RL 199

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           DVV ++AL+D  CK+G +E+A++    M  +G+  +VV YN+++    R+   +     +
Sbjct: 200 DVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGML 259

Query: 568 ERDLGKQKES-----ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
           E   G   E          A C + +  V +A     ++++  G L          +  C
Sbjct: 260 ETMKGDGVEPNVVTYTTFIAECCRTNA-VDDAFSLYEEMVR-MGVLPDVVTLSALVDGLC 317

Query: 623 RQEILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV 681
           R         +F++M K+   PN VT+  ++++  +     ++  LL E+        GV
Sbjct: 318 RAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEV-----VSRGV 372

Query: 682 AHGLLMGYRDNIWVQALSLFDEVK------LMDSSTASAF-YNALTDMLWHFGQKRGAQL 734
              L+M      W+      DEVK      L D+ T +   Y  L D L   G   GA+ 
Sbjct: 373 VMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQ 432

Query: 735 VVLEGKRRQVWENVWSESCL 754
           ++LE + + V  NV + S +
Sbjct: 433 MLLEMEDKSVHPNVVTFSSI 452


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 180/334 (53%), Gaps = 1/334 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    V  ++ LI    + G    A ++F  M R  L PN  TY+ +++   K G+  + 
Sbjct: 188 GLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQ-RE 246

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             +++++M R+G+ P+   +N L++    GG+ + A  +F EM  +GI   + TYN L+ 
Sbjct: 247 GFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIG 306

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            +C+G +   A +++ ++    +SPN+VTY+ +I+G+   G++D A+ +F+++K  G+  
Sbjct: 307 GLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSP 366

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
             V+YNT+++ Y+K+     AL + KEME   I    VTY  L+  + +    ++   M 
Sbjct: 367 TLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMH 426

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
             M+   + P++ TYS LI      G  KEA ++F+   +  L+ + V+Y+ +I   CK 
Sbjct: 427 SLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKE 486

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           G    A+ LL+EM   G+ PNV ++ S I    R
Sbjct: 487 GSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCR 520



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 178/332 (53%), Gaps = 1/332 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y+F  +I     +GY  +   +   ++ + L PN+V Y  +ID C K G +      +F 
Sbjct: 159 YSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYG-NVMLAKNLFC 217

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M R G+ P+  T++ L+    + GL      ++  M   GI  + + YN L+   C G 
Sbjct: 218 KMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGG 277

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            +D AF++ AEM  K I+  V+TY+ +I G  +  +  +A+ +  ++  +G+  + V+YN
Sbjct: 278 MVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYN 337

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +++ +  +G+ + A+ +  +++SSG+    VTYN L+ GY K         + ++M+  
Sbjct: 338 ILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 397

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
           C++P+ +TY+ LID +++    ++A ++    +++GL  DV  YS LI  LC +G ++ A
Sbjct: 398 CIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEA 457

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
             L   + +  ++PN V YN++I  + +  ++
Sbjct: 458 SKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSS 489



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 179/347 (51%), Gaps = 3/347 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           + G V LAKN+F      G     + +S L++ + + G  +E   ++ +MKR  + PN  
Sbjct: 205 KYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAY 264

Query: 265 TYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            YN +I + C  G VD     ++F +M   G+    +T+N L+    RG  +  A  L +
Sbjct: 265 AYNCLISEYCNGGMVD--KAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVH 322

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           ++   G+  +I TYN L++  C   +MD A  +  ++ +  +SP +VTY+T+I GY+K  
Sbjct: 323 KVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVE 382

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            L  AL++  EM+   I   +V+Y  ++  +A+L   E+A  +   ME SG+  D  TY+
Sbjct: 383 NLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYS 442

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+ G    G   E  ++F+ +    + PN + Y+T+I  Y K G    A+++  E   +
Sbjct: 443 VLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHS 502

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           G+  +V  + + I  LC++   + A  LL +M   G++P+V  Y  +
Sbjct: 503 GMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/509 (24%), Positives = 237/509 (46%), Gaps = 53/509 (10%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL----------- 263
           +F TA  +G  +T ++ S +++    SG   +A S+   +    +  +L           
Sbjct: 25  LFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQAHFTP 84

Query: 264 -VTYNAVIDACGKGGV---DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            +TY  + D      V        +     M+  G  P   TFN+L+ +  R   ++ A 
Sbjct: 85  CLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAW 144

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            +FNE+  + +  D +++  ++   C+       F ++A +    +SPNVV Y+T+IDG 
Sbjct: 145 WIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGC 203

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K G +  A N+F +M  LG+  +  +Y+ +++ + K G   E   + + M+ SGI  +A
Sbjct: 204 CKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNA 263

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
             YN L+  Y   G  D+  ++F +M+   ++  ++TY+ LI    +G  + EA+++  +
Sbjct: 264 YAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             + GL  ++V Y+ LI+  C  G +++AV L +++   G+ P +VTYN++I  + +   
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSK--- 380

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
                  VE   G       LD +   +++ +  +  T   +I  F +L          E
Sbjct: 381 -------VENLAGA------LDLVKEMEERCIAPSKVTYTILIDAFARL-------NYTE 420

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML---LEELRLFDN 676
             C    L        M K  + P+V T+S +++      + ++AS L   L E+ L  N
Sbjct: 421 KACEMHSL--------MEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPN 472

Query: 677 QVYGVAHGLLMGY-RDNIWVQALSLFDEV 704
            V  + + ++ GY ++    +AL L +E+
Sbjct: 473 SV--IYNTMIHGYCKEGSSYRALRLLNEM 499



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 2/153 (1%)

Query: 186 EERKNDQGKLA-SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
           EER     K+  + +I    RL   + A  +       G    VY +S LI      G  
Sbjct: 395 EERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNM 454

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           +EA  +F S+   +L+PN V YN +I    K G  ++  + + ++M+ +G+ P+  +F S
Sbjct: 455 KEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYR-ALRLLNEMVHSGMVPNVASFCS 513

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            + +  R   W+ A  L  +M++ G+   +  Y
Sbjct: 514 TIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 247/528 (46%), Gaps = 47/528 (8%)

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR-YN-LKPNLVTYNA 268
            A ++       G+G  VY  + ++  + RSG C +A+S+F+ MKR Y+ + P+ VTYN 
Sbjct: 95  FAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNT 154

Query: 269 VIDACGKGGVDFKHVVE---IFDDMLRNG-VQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           +++   K     K + E   +F+ M + G  +P+ +T++ L+    + G       L  E
Sbjct: 155 LVNGFCKA----KRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEE 210

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G+  D+F Y++L+ A C    ++   E+  EM  + +SPNVVTYS ++ G  + GR
Sbjct: 211 MEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGR 270

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
             +A  M  +M   G+  D V+Y  +     K GR  +A+ V   M   G     +TYN 
Sbjct: 271 WREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNV 330

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF--KQ 502
           ++ G  K+ + D+   + E M      P+ +TY+TL+      G   EAM +++    ++
Sbjct: 331 VVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEK 390

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
             +K DV   + LI  LCK G V  A  +   M + G++ N+VTYN +I+ +        
Sbjct: 391 FHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGY-------- 442

Query: 563 TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
                   L  +K    L        K   E+G + N +   +  ++            C
Sbjct: 443 --------LAARKLIEALKLW-----KYAVESGFSPNSM--TYSVMI---------NGLC 478

Query: 623 RQEILCIL-GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV 681
           + ++L +  G+F KM    I+P V+ ++A++ +  R +S E A  L +E+R  ++ V  V
Sbjct: 479 KMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVV 538

Query: 682 AHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
           +  +++    +      A  L  E+ +MD    +  ++ L +     G
Sbjct: 539 SFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLG 586



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 185/360 (51%), Gaps = 5/360 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    + G+V     + E    EG    V+ +S+LISA+   G  +    +F+ M R
Sbjct: 189 SVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLR 248

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN+VTY+ ++   G+ G  ++   E+  DM   GV+PD + +  L     + G   
Sbjct: 249 RKVSPNVVTYSCLMQGLGRTG-RWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAG 307

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  + + MV +G +    TYN +++ +CK  +MD AF ++  M  K   P+ VTY+T++
Sbjct: 308 DAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLL 367

Query: 377 DGYAKAGRLDDALNMFSEM---KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            G   AG++ +A++++  +   KF  +  D  + N ++    K GR  +A  +   M   
Sbjct: 368 KGLCGAGKIHEAMDLWKLLLSEKF-HVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEM 426

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G++ + VTYN L+ GY    K  E  ++++       SPN +TYS +I+   K  +   A
Sbjct: 427 GLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVA 486

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             +F + K +G++  V+ Y+AL+ +LC+   +E A SL  EM       +VV++N IID 
Sbjct: 487 RGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDG 546



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 206/410 (50%), Gaps = 15/410 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+      G+     + F   ++R+   N      S ++  LGR G+   A  + + 
Sbjct: 223 YSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVT--YSCLMQGLGRTGRWREASEMLKD 280

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
               G    V A++ L     ++G   +AI V + M +   +P  +TYN V++  C +  
Sbjct: 281 MTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDR 340

Query: 278 VDFKH-VVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAA---RNLFNEMVHRGIDQ 332
           +D    VVE+   M++ G +PD +T+N+LL  +C  G + EA    + L +E  H  +  
Sbjct: 341 MDDAFGVVEM---MVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFH--VKP 395

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D+FT N L+  +CK  ++  A  I + M    +  N+VTY+ +I+GY  A +L +AL ++
Sbjct: 396 DVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLW 455

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL-LVCKEMESSGIRKDAVTYNALLGGYGK 451
                 G   + ++Y+ +++   K+     A  L CK M+ SGIR   + YNAL+    +
Sbjct: 456 KYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCK-MKDSGIRPTVIDYNALMTSLCR 514

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           +   ++ R +F++M+    + ++++++ +ID   K G  K A ++  E     L  D V 
Sbjct: 515 EDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVT 574

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +S LI+   K G+++ A+ L ++M   G  P VV ++S++  +G    TE
Sbjct: 575 FSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETE 624



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 182/386 (47%), Gaps = 9/386 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L++ LG  G W +A +       R  R +      + +   L + G+   A  + + 
Sbjct: 258 YSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVA--YTVLADGLCKNGRAGDAIKVLDL 315

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            + +G       ++ +++   +     +A  V   M +   KP+ VTYN ++   CG G 
Sbjct: 316 MVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGK 375

Query: 278 VDFKHVVEIFDDMLRNG--VQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           +     ++++  +L     V+PD  T N+L+  +C  G + +AAR + + MV  G+  +I
Sbjct: 376 I--HEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAAR-IHSSMVEMGLQGNI 432

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TYN L++      ++  A ++         SPN +TYS MI+G  K   L  A  +F +
Sbjct: 433 VTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCK 492

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           MK  GI    + YN +++   +    E+A  + +EM +     D V++N ++ G  K G 
Sbjct: 493 MKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGD 552

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
               + +  +M    + P+ +T+S LI+ +SK G+  EAM ++ +    G    VV++ +
Sbjct: 553 VKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDS 612

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGI 540
           L+      G  E  +SLL +M  + +
Sbjct: 613 LLKGYGLKGETEKIISLLHQMADKDV 638



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/420 (23%), Positives = 197/420 (46%), Gaps = 63/420 (15%)

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           ++A  +++++MV   +     + + L ++         AF +++ M  +    NV   + 
Sbjct: 58  YDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNL 117

Query: 375 MIDGYAKAGRLDDALNMFSEMK--FLGIGLDRVSYNTVLSIYAKLGRFEEALLV------ 426
           ++ G+ ++G+ D A+++FS+MK  +  +  D V+YNT+++ + K  R  EA ++      
Sbjct: 118 VLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKK 177

Query: 427 ------------------CK------------EMESSGIRKDAVTYNALLGGYGKQGKYD 456
                             CK            EME  G++ D   Y++L+  +  +G  +
Sbjct: 178 GGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIE 237

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
             R +F++M    VSPN++TYS L+    + G ++EA ++ ++    G++ DVV Y+ L 
Sbjct: 238 TGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLA 297

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL--GKQ 574
           D LCKNG    A+ +LD M ++G  P  +TYN +++   +    +     VE  +  GK+
Sbjct: 298 DGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKK 357

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI--LCILG- 631
            ++   + +     K +  AG+  ++ + ++  L++EK         C   I  LC  G 
Sbjct: 358 PDAVTYNTLL----KGLCGAGKI-HEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGR 412

Query: 632 ------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGL 685
                 +   M ++ ++ N+VT++ ++        +  A  L+E L+L+    Y V  G 
Sbjct: 413 VHDAARIHSSMVEMGLQGNIVTYNFLIEG------YLAARKLIEALKLWK---YAVESGF 463



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 173/367 (47%), Gaps = 11/367 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           YT L   L   G    AI+     V++ E   + G L  + +++ L +  ++D A  + E
Sbjct: 293 YTVLADGLCKNGRAGDAIKVLDLMVQKGE---EPGTLTYNVVVNGLCKEDRMDDAFGVVE 349

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM--KRYNLKPNLVTYNAVIDA-CG 274
             + +G       ++ L+     +G   EA+ ++  +  +++++KP++ T N +I   C 
Sbjct: 350 MMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCK 409

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQD 333
           +G V       I   M+  G+Q + +T+N L+    +   L EA + L+   V  G   +
Sbjct: 410 EGRV--HDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALK-LWKYAVESGFSPN 466

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             TY+ +++ +CK   + +A  +  +M    I P V+ Y+ ++    +   L+ A ++F 
Sbjct: 467 SMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQ 526

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           EM+ +   +D VS+N ++    K G  + A  +  EM    +  DAVT++ L+  + K G
Sbjct: 527 EMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLG 586

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
             DE   ++E+M +    P ++ + +L+  Y   G  ++ + +  +     +  D  L S
Sbjct: 587 MLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTS 646

Query: 514 ALIDALC 520
            ++  LC
Sbjct: 647 TILACLC 653



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 61/299 (20%), Positives = 122/299 (40%), Gaps = 36/299 (12%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
           A  Y  LL+ L   G+  +A+  +   +  +          + +I  L + G+V  A  I
Sbjct: 360 AVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARI 419

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
             + +  G    +  ++ LI  Y  +    EA+ ++         PN +TY+ +I+   K
Sbjct: 420 HSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCK 479

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
             +       +F  M  +G++P  I +N+L+    R    E AR+LF EM +   + D+ 
Sbjct: 480 MQM-LSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVV 538

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS---------------------- 373
           ++N ++D   K   +  A E+++EM   ++ P+ VT+S                      
Sbjct: 539 SFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKM 598

Query: 374 -------------TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
                        +++ GY   G  +  +++  +M    + LD    +T+L+    + R
Sbjct: 599 VSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSR 657


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 200/385 (51%), Gaps = 6/385 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L   G V  A    ++  + G+ +  Y + A+I+   ++G    AI     +K 
Sbjct: 145 ATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKG 204

Query: 257 YNLKPNLV-TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            N   ++V  Y+ ++D+  K G+     + +F  M   G+QPD + +NSL+      G W
Sbjct: 205 RNCDLDVVIAYSTIMDSLCKDGM-VCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRW 263

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  L   M+ +GI  ++ T+N L+D  CK   +  A  IM  M    + P+VVTY+++
Sbjct: 264 KEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSV 323

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G+    ++ DA+ +F  M   G   + V+Y++++  + K     +AL +  EM +SG+
Sbjct: 324 ISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGL 383

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VT++ L+GG+ K GK +  + +F  M      PNL T + ++D   K   + EA+ 
Sbjct: 384 NPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAIS 443

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +FRE ++  L+ +VV+Y+ ++D +C  G +  A  L   +  +GI+ +VV Y ++I    
Sbjct: 444 LFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLC 503

Query: 556 RSATTECTVDDVERDLGKQKESANL 580
           +    E  +DD E  L K +E+  L
Sbjct: 504 K----EGLLDDAENLLMKMEENGCL 524



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 172/326 (52%), Gaps = 1/326 (0%)

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
           + V A+S ++ +  + G   EA+++F+ M    ++P+LV YN++I      G  +K    
Sbjct: 210 DVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFG-RWKEATT 268

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +  +M+R G+ P+  TFN L+    + G+   A+ +   MVH G++ D+ TYN+++   C
Sbjct: 269 LLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHC 328

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
             +QM  A ++   M  K   PN+VTYS++I G+ K   ++ AL +  EM   G+  D V
Sbjct: 329 LLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVV 388

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +++T++  + K G+ E A  +   M       +  T   +L G  K   + E   +F +M
Sbjct: 389 TWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREM 448

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           +   +  N++ Y+ ++D     G   +A ++F      G+K DVV Y+ +I  LCK GL+
Sbjct: 449 EKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLL 508

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSII 551
           + A +LL +M + G  PN  TYN  +
Sbjct: 509 DDAENLLMKMEENGCLPNEFTYNVFV 534



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 115/493 (23%), Positives = 194/493 (39%), Gaps = 72/493 (14%)

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH---VVEIFDDMLRNGVQPDRIT 301
           + A+S F+ M   N  P    +  +        V  KH    + +   +   G++PD  T
Sbjct: 53  EAALSFFHKMVVMNPLPREKDFTKLFGII----VKMKHYATTISLIKHIYSLGIKPDVYT 108

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
              ++             ++   M   G+D  + T+ TL++ +C    +  A      + 
Sbjct: 109 LTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLE 168

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV-SYNTVLSIYAKLGRF 420
                 N  TY  +I+G  KAG    A+    ++K     LD V +Y+T++    K G  
Sbjct: 169 DMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMV 228

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
            EAL +   M S GI+ D V YN+L+ G    G++ E   +   M    + PN+ T++ L
Sbjct: 229 CEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVL 288

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           +D + K G+   A  I       G++ DVV Y+++I   C    +  AV + + M  +G 
Sbjct: 289 VDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGF 348

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
            PN+VTY+S+I  +       C   ++ + L    E  N     S  + DV         
Sbjct: 349 LPNLVTYSSLIHGW-------CKTKNINKALFLLGEMVN-----SGLNPDVV-------- 388

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
               +  L+      GK E    +E+ C       MH+    PN+ T + IL+   +C  
Sbjct: 389 ---TWSTLIGGFCKAGKPE--AAKELFC------TMHEHDQHPNLQTCAIILDGLFKCQF 437

Query: 661 FEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALT 720
                                              +A+SLF E++ M+       YN + 
Sbjct: 438 HS---------------------------------EAISLFREMEKMNLELNVVIYNIVL 464

Query: 721 DMLWHFGQKRGAQ 733
           D +  FG+   AQ
Sbjct: 465 DGMCSFGKLNDAQ 477



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 151/327 (46%), Gaps = 3/327 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L N G W +A       +++    N Q    + ++    + G +  AK I   
Sbjct: 250 YNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQT--FNVLVDNFCKDGMISRAKTIMGF 307

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            ++ G    V  ++++IS +       +A+ VF  M      PNLVTY+++I    K   
Sbjct: 308 MVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTK- 366

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           +    + +  +M+ +G+ PD +T+++L+    + G  EAA+ LF  M       ++ T  
Sbjct: 367 NINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCA 426

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            +LD + K      A  +  EM   N+  NVV Y+ ++DG    G+L+DA  +FS +   
Sbjct: 427 IILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSK 486

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI +D V+Y T++    K G  ++A  +  +ME +G   +  TYN  + G  ++      
Sbjct: 487 GIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRS 546

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYS 485
            +    MK   +S +  T   LI  +S
Sbjct: 547 TKYLLLMKGKGLSADATTTELLISYFS 573


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 193/382 (50%), Gaps = 40/382 (10%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V+A++ALI+ + +     +A  V + M+  +  P+ VTYN +I + C +G +D    +++
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL--ALKV 215

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
            + +L +  QP  IT+  L+ A    GG+ EA + L +EM+ RG+  D+FTYNT++  +C
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALK-LMDEMLSRGLKPDMFTYNTIIRGMC 274

Query: 346 KGAQMDLAFE-----------------------------------IMAEMPAKNISPNVV 370
           K   +D AFE                                   +M +M ++   PNVV
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TYS +I    + G++++A+N+   MK  G+  D  SY+ +++ + + GR + A+   + M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
            S G   D V YN +L    K GK D+   +F ++     SPN  +Y+T+       G  
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             A+ +  E    G+  D + Y+++I  LC+ G+V+ A  LL +M      P+VVTYN +
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514

Query: 551 IDAFGRSATTECTVDDVERDLG 572
           +  F ++   E  ++ +E  +G
Sbjct: 515 LLGFCKAHRIEDAINVLESMVG 536



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 177/358 (49%), Gaps = 3/358 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI  L   GK+DLA  +    L++    TV  ++ LI A    G   EA+ + + M    
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           LKP++ TYN +I   C +G VD     E+  ++   G +PD I++N LL      G WE 
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVD--RAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEE 316

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
              L  +M     D ++ TY+ L+  +C+  +++ A  ++  M  K ++P+  +Y  +I 
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            + + GRLD A+     M   G   D V+YNTVL+   K G+ ++AL +  ++   G   
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           ++ +YN +       G       M  +M ++ + P+ +TY+++I    + G+  EA ++ 
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            + +       VV Y+ ++   CK   +E A+++L+ M   G RPN  TY  +I+  G
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 217/446 (48%), Gaps = 26/446 (5%)

Query: 240 RSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV---VEIFDDMLRNGVQ 296
           RSG   E++ +  +M R    P+++    +I    KG    +++   V + + + + G Q
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLI----KGFFTLRNIPKAVRVMEILEKFG-Q 155

Query: 297 PDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           PD   +N+L+   C    + +A R + + M  +    D  TYN ++ ++C   ++DLA +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATR-VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++ ++ + N  P V+TY+ +I+     G +D+AL +  EM   G+  D  +YNT++    
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K G  + A  + + +E  G   D ++YN LL     QGK++E  ++  +M ++   PN++
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TYS LI    + G  +EAM + +  K+ GL  D   Y  LI A C+ G ++ A+  L+ M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDD 588
             +G  P++V YN+++    ++   +  + ++   LG+   S N         A+ S  D
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQAL-EIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453

Query: 589 KDVQEAGRTDNQIIKVFGQLV--AEKAGQGKKENRCRQEILC-ILGVFQKMHKLKIKPNV 645
           K      R  + I+++    +   E          CR+ ++     +   M   +  P+V
Sbjct: 454 KI-----RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508

Query: 646 VTFSAILNACSRCNSFEDASMLLEEL 671
           VT++ +L    + +  EDA  +LE +
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESM 534



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 149/302 (49%), Gaps = 13/302 (4%)

Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMI 200
           ++++  E K    D   Y  LLR L N+G+W +  +      K    K D   +  S +I
Sbjct: 284 EMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEK---LMTKMFSEKCDPNVVTYSILI 340

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           + L R GK++ A N+ +    +G     Y++  LI+A+ R G    AI    +M      
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           P++V YN V+   C  G  D    +EIF  +   G  P+  ++N++ +     G    A 
Sbjct: 401 PDIVNYNTVLATLCKNGKAD--QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           ++  EM+  GID D  TYN+++  +C+   +D AFE++ +M +    P+VVTY+ ++ G+
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            KA R++DA+N+   M   G   +  +Y  ++      G   EA+    E+ +  +R DA
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM----ELANDLVRIDA 574

Query: 440 VT 441
           ++
Sbjct: 575 IS 576



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/399 (23%), Positives = 174/399 (43%), Gaps = 40/399 (10%)

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C+      +  ++  M  K  +P+V+  + +I G+     +  A+ +   ++  G   D 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +YN +++ + K+ R ++A  V   M S     D VTYN ++G    +GK D   ++  Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           + +D   P ++TY+ LI+     G   EA+++  E    GLK D+  Y+ +I  +CK G+
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAM 583
           V+ A  ++  +  +G  P+V++YN ++ A                + GK +E   L   M
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRAL--------------LNQGKWEEGEKLMTKM 324

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
            S+         + D  ++  +  L+      GK E          + + + M +  + P
Sbjct: 325 FSE---------KCDPNVV-TYSILITTLCRDGKIEE--------AMNLLKLMKEKGLTP 366

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWVQALS 699
           +  ++  ++ A  R    + A   LE +     L D   Y      L   ++    QAL 
Sbjct: 367 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC--KNGKADQALE 424

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           +F ++  +  S  S+ YN +   LW  G K  A  ++LE
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 220/475 (46%), Gaps = 47/475 (9%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G +  A+ +      EG   T   ++ L+SAY R G+ ++A  V  +M  +  +P+L 
Sbjct: 256 RKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLW 315

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNG-VQPDRITFNSLLAVCSRGGLWEAARNLF 322
           TYN +    C  G VD     ++ D+M + G V PD +T+N+L+  C +      A NL 
Sbjct: 316 TYNVLAAGLCQAGKVD--EAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLL 373

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            EM  +G+   + T+N ++  +C+  Q++ A   +  M  + ++P+V+TY+T+ID   KA
Sbjct: 374 EEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKA 433

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G +  A  +  EM   G+ +D  + NT+L    K  R+EEA  + +     G   D V+Y
Sbjct: 434 GNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSY 493

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             ++  Y K+ K +    ++++M    ++P++ TY+TLI   S  G   EA+    E  +
Sbjct: 494 GTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELME 553

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
            GL  D   Y+ +I A CK G +E A    ++M +   +P+VVT N++++        E 
Sbjct: 554 MGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEK 613

Query: 563 TVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
            +   E  + K K+      +  + A+C  +D D                          
Sbjct: 614 AMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTA------------------------ 649

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                        L  F  M    ++P+V T++ +L+A S      +A  +L +L
Sbjct: 650 -------------LRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKL 691



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 233/494 (47%), Gaps = 50/494 (10%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIF 287
           Y F+ L+  +   G   +A+S  + M+ + L P+ VTYN +++A C KG +       + 
Sbjct: 210 YTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLG--EARTLL 267

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
             M + G+ P R T+N+L++  +R G  + A ++   M   G + D++TYN L   +C+ 
Sbjct: 268 ARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQA 327

Query: 348 AQMDLAFEIMAEMPAKNI-SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
            ++D AF++  EM    I SP+VVTY+T++D   K  R  DALN+  EM+  G+    V+
Sbjct: 328 GKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVT 387

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +N ++    + G+ EEAL   + M   G+  D +TYN L+    K G   +   + ++M 
Sbjct: 388 HNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMV 447

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              +  +  T +TL+    K   Y+EA ++ R   Q G   D V Y  ++ A  K    E
Sbjct: 448 RSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPE 507

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV----ERDLGKQKESANLDA 582
            A+ L DEM K  + P++ TYN++I            +D +    E  L     + N+  
Sbjct: 508 PALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIII 567

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI---------LCILGVF 633
                + D+++A +  N+++                EN  + ++         LC+ G  
Sbjct: 568 HAYCKEGDLEKAFQFHNKMV----------------ENSFKPDVVTCNTLMNGLCLYGRL 611

Query: 634 QKMHKL-------KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF-DNQVYGVAHGL 685
           +K  KL         K +V+T++ ++ A  + N  + A      LR F D +V G+   +
Sbjct: 612 EKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTA------LRFFADMEVRGLQPDV 665

Query: 686 LMGYRDNIWVQALS 699
              +  N+ + ALS
Sbjct: 666 ---FTYNVLLSALS 676



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 209/396 (52%), Gaps = 25/396 (6%)

Query: 292 RNGVQPDRITFNSLLAVCSRGGLW--EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           R  V+P     N++L+  +R      +A+ + F+ ++   +  + +T+N L+   C    
Sbjct: 165 RGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGT 224

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  A   +++M    +SP+ VTY+T+++ + + G L +A  + + MK  GI   R +YNT
Sbjct: 225 LADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNT 284

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA-D 468
           ++S YA+LG  ++A  V + M + G   D  TYN L  G  + GK DE  ++ ++M+   
Sbjct: 285 LVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLG 344

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            VSP+++TY+TL+D   K     +A+ +  E ++ G+K+ +V ++ ++  LC+ G +E A
Sbjct: 345 IVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEA 404

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDA---FGRSATTECTVDDVERDLGKQKESANLDA--- 582
           +  L+ MT+EG+ P+V+TYN++IDA    G  A     +D++ R  G + ++  L+    
Sbjct: 405 LGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRS-GLKMDTFTLNTLLY 463

Query: 583 -MCSQDD-KDVQEAGRTDNQIIKV-----FGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
            +C +   ++ +E  R   Q   V     +G ++A    + K E       LC+   + +
Sbjct: 464 NLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPE-----PALCL---WDE 515

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           M K K+ P++ T++ ++   S      +A   L EL
Sbjct: 516 MIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNEL 551



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 183/373 (49%), Gaps = 6/373 (1%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A N+ E    +G  +++   + ++    R G  +EA+     M    L P+++TYN +ID
Sbjct: 369 ALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLID 428

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           A  K G   K  V + D+M+R+G++ D  T N+LL    +   +E A  L      RG  
Sbjct: 429 ASCKAGNVAKAFV-LMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFV 487

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  +Y T++ A  K  + + A  +  EM  + ++P++ TY+T+I G +  G+L +A++ 
Sbjct: 488 PDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDK 547

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
            +E+  +G+  D  +YN ++  Y K G  E+A     +M  +  + D VT N L+ G   
Sbjct: 548 LNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCL 607

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G+ ++  ++FE         +++TY+TLI    K      A++ F + +  GL+ DV  
Sbjct: 608 YGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFT 667

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI---IDAF--GRSATTECTVDD 566
           Y+ L+ AL + G    A  +L ++ + G       Y SI   ++A   G+    +  ++ 
Sbjct: 668 YNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIES 727

Query: 567 VERDLGKQKESAN 579
           V    G  +ES N
Sbjct: 728 VGNTQGDDQESYN 740



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 140/547 (25%), Positives = 244/547 (44%), Gaps = 48/547 (8%)

Query: 233 ALISAYGRSGYCQEAISVFNSMKRYN-LKPNLVTYNAVIDACGKG-GVDFKHVVEIFDDM 290
           A +S Y R      A  + +S +R   ++P+L   NAV+ A  +      +  ++ F  +
Sbjct: 141 AALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSL 200

Query: 291 LRNGVQPDRITFNSLLAV-CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           +   + P+  TFN L+   CS+G L +A   L ++M   G+  D  TYNTLL+A C+   
Sbjct: 201 IALRLHPNHYTFNLLVHTHCSKGTLADALSTL-SKMQGFGLSPDAVTYNTLLNAHCRKGM 259

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK---------------------------- 381
           +  A  ++A M  + I P   TY+T++  YA+                            
Sbjct: 260 LGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNV 319

Query: 382 -------AGRLDDALNMFSEMKFLGI-GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
                  AG++D+A  +  EM+ LGI   D V+YNT++    K  R  +AL + +EM   
Sbjct: 320 LAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREK 379

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G++   VT+N ++ G  ++G+ +E     E M  + ++P+++TY+TLID   K G   +A
Sbjct: 380 GVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKA 439

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             +  E  ++GLK D    + L+  LCK    E A  LL    + G  P+ V+Y +++ A
Sbjct: 440 FVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAA 499

Query: 554 FGRSATTE---CTVDD-VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
           + +    E   C  D+ ++R L     + N           + EA    N+++++ G + 
Sbjct: 500 YFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEM-GLVP 558

Query: 610 AEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
            +          C++ ++        KM +   KP+VVT + ++N        E A  L 
Sbjct: 559 DDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLF 618

Query: 669 EELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHF 726
           E       +V  + +  L+    +DN    AL  F ++++         YN L   L   
Sbjct: 619 ESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEA 678

Query: 727 GQKRGAQ 733
           G+   AQ
Sbjct: 679 GRSVEAQ 685



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 121/261 (46%), Gaps = 6/261 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L  +GK+  A +     +  G       ++ +I AY + G  ++A    N M  
Sbjct: 529 NTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVE 588

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            + KP++VT N +++  C  G ++    +++F+  +  G + D IT+N+L+    +    
Sbjct: 589 NSFKPDVVTCNTLMNGLCLYGRLE--KAMKLFESWVEKGKKVDVITYNTLIQALCKDNDV 646

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A   F +M  RG+  D+FTYN LL A+ +  +   A +++ ++           Y + 
Sbjct: 647 DTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPS- 705

Query: 376 IDGYAKAGRLDDALNMFSEMKFLG--IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           I    +A        + S+++ +G   G D+ SYN  +      G+ +EA  V  EM   
Sbjct: 706 IKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQK 765

Query: 434 GIRKDAVTYNALLGGYGKQGK 454
           G+  D  TY  L+ G  K+ K
Sbjct: 766 GMSVDNSTYITLMEGLIKRQK 786



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 12/228 (5%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAM--ISILGRLGKVDLAKNIF 216
           Y  ++      G+  KA Q F   +     K D     + M  + + GRL K   A  +F
Sbjct: 563 YNIIIHAYCKEGDLEKAFQ-FHNKMVENSFKPDVVTCNTLMNGLCLYGRLEK---AMKLF 618

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           E+ + +G    V  ++ LI A  +      A+  F  M+   L+P++ TYN ++ A  + 
Sbjct: 619 ESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEA 678

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSL---LAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G   +   ++   +  +G    R  + S+   +     G   E   ++ +    +G DQ+
Sbjct: 679 GRSVE-AQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQE 737

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             +YN  +  +C G Q+  A  ++ EM  K +S +  TY T+++G  K
Sbjct: 738 --SYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783


>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 182/357 (50%), Gaps = 3/357 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I++  ++GKV  A  + +     G  + +  +S LI+ + R      A +VF  + +  
Sbjct: 449 LINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDG 508

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           LKP++V YN +I A CG G +D    +    +M +   +P   TF  ++   +R G    
Sbjct: 509 LKPDVVLYNNIIRAFCGMGNMD--RAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRR 566

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +F+ M   G    + T+N L+  + +  QM+ A EI+ EM    ISPN  TY+T++ 
Sbjct: 567 ALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMH 626

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GYA  G    A   F+++K  G+ LD  +Y  +L    K GR + AL V +EM S  I +
Sbjct: 627 GYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPR 686

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +   YN L+ G+ ++G   E   + +QMK + V P++ TY++ I+   K G  + A +  
Sbjct: 687 NTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTI 746

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +E +  G+K ++  Y+ LI    +  L E A+    EM   G++P+   Y+ ++ + 
Sbjct: 747 QEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSL 803



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 178/348 (51%), Gaps = 3/348 (0%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +F+     G+  +V ++  LI+ Y + G   +A+ V   M+   +K N+ TY+ +I+   
Sbjct: 430 VFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFV 489

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQD 333
           +   D+ +   +F+D++++G++PD + +N+++ A C  G +  A R +  EM        
Sbjct: 490 RLK-DWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTV-KEMQKERHRPT 547

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             T+  ++    +   M  A EI   M      P V T++ +I G  +  +++ A+ +  
Sbjct: 548 TRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILD 607

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           EM   GI  +  +Y T++  YA LG   +A     ++++ G+  D  TY ALL    K G
Sbjct: 608 EMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSG 667

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           +      +  +M +  +  N   Y+ LID +++ G   EA ++ ++ KQ G++ D+  Y+
Sbjct: 668 RMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYT 727

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + I+A CK G ++ A   + EM   G++PN+ TY ++I  + R++  E
Sbjct: 728 SFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPE 775



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 131/578 (22%), Positives = 253/578 (43%), Gaps = 53/578 (9%)

Query: 172 WSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAF 231
           W   +Q F   +K+  RK         M++   R G +  A+  FE+    G   T + +
Sbjct: 253 WQAVVQAFE-RIKKPSRKE-----FGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVY 306

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           ++LI AY      +EA+S    MK   ++ +LVTY+ ++    K   D +     F +  
Sbjct: 307 TSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIA-DAEAADHWFKEAK 365

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
                 + I + +++    +      A  L  EM   GID  I  Y+T++D        +
Sbjct: 366 ERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEE 425

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
               +   +     +P+V++Y  +I+ Y K G++  AL +   M+  GI  +  +Y+ ++
Sbjct: 426 KCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLI 485

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           + + +L  +  A  V +++   G++ D V YN ++  +   G  D   R  ++M+ +   
Sbjct: 486 NGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHR 545

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P   T+  +I  +++ G  + A++IF   + +G    V  ++ALI  L +   +E AV +
Sbjct: 546 PTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEI 605

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSAT--------TECTVDDVERDLGKQKESANLDAM 583
           LDEM+  GI PN  TY +I+  +             T+   + +E D+   +  A L A 
Sbjct: 606 LDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYE--ALLKAC 663

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC-----------RQEILCILGV 632
           C        ++GR  + +      +  E + Q    N             R ++     +
Sbjct: 664 C--------KSGRMQSAL-----AVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAEL 710

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG------LL 686
            Q+M +  ++P++ T+++ +NAC +    + A+  ++E+     +V GV         L+
Sbjct: 711 MQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEM-----EVVGVKPNIKTYTTLI 765

Query: 687 MGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
            G+ R ++  +AL  F E+K        A Y+ L   L
Sbjct: 766 HGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSL 803



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 191/403 (47%), Gaps = 40/403 (9%)

Query: 279 DFKHVVEIFDDMLRNGVQ-------PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           DF+ V+E   +  +  VQ       P R  F  ++   +R G    AR  F  M  RGI+
Sbjct: 241 DFRKVLETEPENWQAVVQAFERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIE 300

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
                Y +L+ A   G  M+ A   + +M  + I  ++VTYS ++ G+AK    + A + 
Sbjct: 301 PTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHW 360

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F E K     L+ + Y  ++  + +     +A  + +EME  GI      Y+ ++ GY  
Sbjct: 361 FKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTI 420

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G  ++   +F+++K    +P++++Y  LI++Y K G   +A+++ +  + AG+K ++  
Sbjct: 421 IGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKT 480

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           YS LI+   +     +A ++ +++ K+G++P+VV YN+II AF       C + +++R +
Sbjct: 481 YSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAF-------CGMGNMDRAI 533

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
              KE         Q ++  +   RT   II  F      ++G  ++           L 
Sbjct: 534 RTVKE--------MQKERH-RPTTRTFMPIIHGFA-----RSGDMRR----------ALE 569

Query: 632 VFQKMHKLKIKPNVVTFSA-ILNACSRCNSFEDASMLLEELRL 673
           +F  M      P V TF+A IL    +C   E A  +L+E+ L
Sbjct: 570 IFDMMRWSGCIPTVHTFNALILGLVEKCQ-MEKAVEILDEMSL 611


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 208/426 (48%), Gaps = 27/426 (6%)

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           ++V +NA+ID   K   D    + + + M   GV  D + +NSL+A     G  +AA  +
Sbjct: 186 DVVGWNALIDGYCKVQ-DMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEV 244

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
              M   G++ ++ TY  L+   CKG  MD AF +   M    + P+VVT S ++DG  +
Sbjct: 245 VERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCR 304

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G+  +A  +F EM  +G+  + V+Y T++   AK  R  E+L +  EM S G+  D V 
Sbjct: 305 DGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVM 364

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y AL+   GK+GK +E + +    ++D ++PN +TY+ L+D + + G    A Q+  + +
Sbjct: 365 YTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQME 424

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +  +  +VV +S++I+ L K G +  A   + +M   GI PNVVTY ++ID F +    E
Sbjct: 425 EKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQE 484

Query: 562 CTVDDVERDLGKQKESAN---LDAMCSQDD------------KDVQEAGRTDNQIIKVFG 606
             + DV RD+  +   AN   +D++ +               KD+ E G   + +     
Sbjct: 485 AAL-DVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHV----- 538

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
                  G  K  N     +     V Q++ +  + P+ V ++  +N       F +A  
Sbjct: 539 NYTTLMDGLFKTGN-----MPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKS 593

Query: 667 LLEELR 672
            L+E+R
Sbjct: 594 FLKEMR 599



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 195/396 (49%), Gaps = 9/396 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  LG  G+  +A      A  + +         + ++    R G +D A+ +   
Sbjct: 365 YTALMDRLGKEGKIEEAKDVLRHA--QSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQ 422

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +     V  FS++I+   + G   +A      MK   + PN+VTY  +ID    G  
Sbjct: 423 MEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLID----GFF 478

Query: 279 DFK---HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            F+     ++++ DML  GV+ +    +SL+    + G  E A  LF +M  RG+  D  
Sbjct: 479 KFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHV 538

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            Y TL+D + K   M  AF++  E+  KN+SP+ V Y+  I+     G+  +A +   EM
Sbjct: 539 NYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEM 598

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           +  G+  D+ +YNT+++   + G+  +AL + KEM+ + I+ + +TY  L+ G  + G  
Sbjct: 599 RNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVV 658

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            + + +  +M +   +P  LT+  ++   S        ++I      AGL AD+ +Y+ L
Sbjct: 659 KKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTL 718

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +  LC +G+  +A  +LDEM   GI P+ +T+N++I
Sbjct: 719 VHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALI 754



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 134/571 (23%), Positives = 273/571 (47%), Gaps = 36/571 (6%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI- 270
           A  + E    +G    V  +++L++ +  SG    A+ V   MK   ++PN+VTY A+I 
Sbjct: 206 ALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIG 265

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           + C   G+D      +++ M+R+GV PD +T ++L+    R G +  A  LF EM   G+
Sbjct: 266 EYCKGKGMD--EAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGV 323

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             +  TY TL+D++ K  +   +  ++ EM ++ +  ++V Y+ ++D   K G++++A +
Sbjct: 324 APNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKD 383

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +    +   I  + V+Y  ++  + + G  + A  V  +ME   +  + VT+++++ G  
Sbjct: 384 VLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLV 443

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K+G   +      +MK   ++PN++TY TLID + K    + A+ ++R+    G++A+  
Sbjct: 444 KRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNF 503

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS----ATTECTVDD 566
           +  +L++ L KNG +E A +L  +M + G+  + V Y +++D   ++    A  +   + 
Sbjct: 504 VVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQEL 563

Query: 567 VERDLGKQKESAN--LDAMCSQDD--------KDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
           +E++L       N  ++ +C+           K+++  G   +Q    +  ++A +  +G
Sbjct: 564 MEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQ--ATYNTMIAARCREG 621

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
           K            L + ++M +  IKPN++T++ ++         + A  LL E+     
Sbjct: 622 KTSKA--------LKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGF 673

Query: 677 QVYGVAHGLLM-----GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRG 731
               + H  ++       R ++ ++   L     L    T    YN L  +L   G  R 
Sbjct: 674 APTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITV---YNTLVHVLCCHGMARN 730

Query: 732 AQLVVLEGKRRQVWENVWSESCLDL-HLMSS 761
           A +V+ E   R +  +  + + L L H  SS
Sbjct: 731 ATVVLDEMLTRGIAPDTITFNALILGHCKSS 761



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 195/425 (45%), Gaps = 41/425 (9%)

Query: 176 IQCFAFAVKREERKNDQGKLA-----SAMISILGRLGKVDLAKNIFETALNEGYGNTVYA 230
           +Q  A A+   ER   QG        +++++     G  D A  + E    +G    V  
Sbjct: 200 VQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVT 259

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           ++ALI  Y +     EA S++  M R  + P++VT +A++D   + G  F     +F +M
Sbjct: 260 YTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDG-QFSEAYALFREM 318

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF--------------- 335
            + GV P+ +T+ +L+   ++      +  L  EMV RG+  D+                
Sbjct: 319 DKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKI 378

Query: 336 --------------------TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
                               TY  L+DA C+   +D A +++ +M  K++ PNVVT+S++
Sbjct: 379 EEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSI 438

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+G  K G L  A +   +MK  GI  + V+Y T++  + K    E AL V ++M   G+
Sbjct: 439 INGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGV 498

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +    ++L+ G  K G  +    +F+ M    +  + + Y+TL+D   K G    A +
Sbjct: 499 EANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFK 558

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           + +E  +  L  D V+Y+  I+ LC  G    A S L EM   G+ P+  TYN++I A  
Sbjct: 559 VGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARC 618

Query: 556 RSATT 560
           R   T
Sbjct: 619 REGKT 623



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 179/372 (48%), Gaps = 34/372 (9%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I+ L  LGK   AK+  +   N G       ++ +I+A  R G   +A+ +   MKR ++
Sbjct: 579 INCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSI 638

Query: 260 KPNLVTYNAVIDACGKGGVDFKH----------------------------------VVE 285
           KPNL+TY  ++    + GV  K                                   ++E
Sbjct: 639 KPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILE 698

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           I + M+  G+  D   +N+L+ V    G+   A  + +EM+ RGI  D  T+N L+   C
Sbjct: 699 IHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHC 758

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K + +D AF I A+M  + +SPN+ T++T++ G   AGR+ +A  + S+MK +G+  + +
Sbjct: 759 KSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNL 818

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y+ +++ YAK     EAL +  EM S G    A TYN+L+  + K G  ++ + +F +M
Sbjct: 819 TYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEM 878

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           K   V     TY  L++ +SK     E   + ++ K+ G K      S++  A  + G+ 
Sbjct: 879 KRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMT 938

Query: 526 ESAVSLLDEMTK 537
             A  LL  + K
Sbjct: 939 GEARRLLKTLFK 950



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 174/382 (45%), Gaps = 36/382 (9%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A +++   L+EG     +   +L++   ++G  + A ++F  M    L  + V Y  ++D
Sbjct: 486 ALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMD 545

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              K G +     ++  +++   + PD + +N  +      G +  A++   EM + G++
Sbjct: 546 GLFKTG-NMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLE 604

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D  TYNT++ A C+  +   A +++ EM   +I PN++TY+T++ G  +AG +  A  +
Sbjct: 605 PDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFL 664

Query: 392 FSEMK---------------------------------FLGIGL--DRVSYNTVLSIYAK 416
            +EM                                   +G GL  D   YNT++ +   
Sbjct: 665 LNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCC 724

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
            G    A +V  EM + GI  D +T+NAL+ G+ K    D    ++ QM    +SPN+ T
Sbjct: 725 HGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIAT 784

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           ++TL+      G   EA  +  + K+ GL+ + + Y  L+    K      A+ L  EM 
Sbjct: 785 FNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMV 844

Query: 537 KEGIRPNVVTYNSIIDAFGRSA 558
            +G  P   TYNS++  F ++ 
Sbjct: 845 SKGFIPKASTYNSLMSDFAKAG 866



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 170/364 (46%), Gaps = 37/364 (10%)

Query: 295 VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAF 354
           V  D +++N  LA  S  G    A  + +EM  RG+  D  T +T L  +C+   +  A 
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEA- 169

Query: 355 EIMAEMPAKNISP---NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
             +AEM  +       +VV ++ +IDGY K   +  AL +   M   G+ LD V YN+++
Sbjct: 170 AALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLV 229

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           + +   G  + AL V + M++ G+  + VTY AL+G Y K    DE   ++E M    V 
Sbjct: 230 AGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVL 289

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P+++T S L+D   + G + EA  +FRE  + G+  + V Y  LID+L K      ++ L
Sbjct: 290 PDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGL 349

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
           L EM   G+  ++V Y +++D  G+               GK +E+           KDV
Sbjct: 350 LGEMVSRGVVMDLVMYTALMDRLGKE--------------GKIEEA-----------KDV 384

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSA 650
               ++DN         V   A        CR   I     V  +M +  + PNVVTFS+
Sbjct: 385 LRHAQSDNITPNFVTYTVLVDA-------HCRAGNIDGAEQVLLQMEEKSVIPNVVTFSS 437

Query: 651 ILNA 654
           I+N 
Sbjct: 438 IING 441



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 39/276 (14%)

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSG----IRKDAVTYNALLGGYGKQGKYDEV 458
           D ++ N+++  Y  L     AL + +          +  D V+YN  L    +QG     
Sbjct: 75  DTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLA 134

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA-GLKA-DVVLYSALI 516
             +  +M    VS + +T ST +    + GL  EA  +     +  G+   DVV ++ALI
Sbjct: 135 PPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALI 194

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
           D  CK   + +A+++++ MT +G+  +VV YNS++  F  S   +  ++ VER       
Sbjct: 195 DGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVER------- 247

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA-GQGKKENRCRQEILCILGVFQK 635
                         ++  G   N +   +  L+ E   G+G  E            +++ 
Sbjct: 248 --------------MKADGVEPNVV--TYTALIGEYCKGKGMDE---------AFSLYEG 282

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           M +  + P+VVT SA+++   R   F +A  L  E+
Sbjct: 283 MVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREM 318


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 193/382 (50%), Gaps = 40/382 (10%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V+A++ALI+ + +     +A  V + M+  +  P+ VTYN +I + C +G +D    +++
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL--ALKV 215

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
            + +L +  QP  IT+  L+ A    GG+ EA + L +EM+ RG+  D+FTYNT++  +C
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALK-LMDEMLSRGLKPDMFTYNTIIRGMC 274

Query: 346 KGAQMDLAFE-----------------------------------IMAEMPAKNISPNVV 370
           K   +D AFE                                   +M +M ++   PNVV
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           TYS +I    + G++++A+N+   MK  G+  D  SY+ +++ + + GR + A+   + M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
            S G   D V YN +L    K GK D+   +F ++     SPN  +Y+T+       G  
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             A+ +  E    G+  D + Y+++I  LC+ G+V+ A  LL +M      P+VVTYN +
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514

Query: 551 IDAFGRSATTECTVDDVERDLG 572
           +  F ++   E  ++ +E  +G
Sbjct: 515 LLGFCKAHRIEDAINVLESMVG 536



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 177/358 (49%), Gaps = 3/358 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI  L   GK+DLA  +    L++    TV  ++ LI A    G   EA+ + + M    
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           LKP++ TYN +I   C +G VD     E+  ++   G +PD I++N LL      G WE 
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVD--RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
              L  +M     D ++ TY+ L+  +C+  +++ A  ++  M  K ++P+  +Y  +I 
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            + + GRLD A+     M   G   D V+YNTVL+   K G+ ++AL +  ++   G   
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           ++ +YN +       G       M  +M ++ + P+ +TY+++I    + G+  EA ++ 
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            + +       VV Y+ ++   CK   +E A+++L+ M   G RPN  TY  +I+  G
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 217/446 (48%), Gaps = 26/446 (5%)

Query: 240 RSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV---VEIFDDMLRNGVQ 296
           RSG   E++ +  +M R    P+++    +I    KG    +++   V + + + + G Q
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLI----KGFFTLRNIPKAVRVMEILEKFG-Q 155

Query: 297 PDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           PD   +N+L+   C    + +A R + + M  +    D  TYN ++ ++C   ++DLA +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATR-VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++ ++ + N  P V+TY+ +I+     G +D+AL +  EM   G+  D  +YNT++    
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K G  + A  + + +E  G   D ++YN LL     QGK++E  ++  +M ++   PN++
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TYS LI    + G  +EAM + +  K+ GL  D   Y  LI A C+ G ++ A+  L+ M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDD 588
             +G  P++V YN+++    ++   +  + ++   LG+   S N         A+ S  D
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQAL-EIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453

Query: 589 KDVQEAGRTDNQIIKVFGQLV--AEKAGQGKKENRCRQEILC-ILGVFQKMHKLKIKPNV 645
           K      R  + I+++    +   E          CR+ ++     +   M   +  P+V
Sbjct: 454 KI-----RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508

Query: 646 VTFSAILNACSRCNSFEDASMLLEEL 671
           VT++ +L    + +  EDA  +LE +
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESM 534



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 150/302 (49%), Gaps = 13/302 (4%)

Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMI 200
           ++++  E K C  D   Y  LLR L N+G+W +  +      K    K D   +  S +I
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK---LMTKMFSEKCDPNVVTYSILI 340

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           + L R GK++ A N+ +    +G     Y++  LI+A+ R G    AI    +M      
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           P++V YN V+   C  G  D    +EIF  +   G  P+  ++N++ +     G    A 
Sbjct: 401 PDIVNYNTVLATLCKNGKAD--QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           ++  EM+  GID D  TYN+++  +C+   +D AFE++ +M +    P+VVTY+ ++ G+
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            KA R++DA+N+   M   G   +  +Y  ++      G   EA+    E+ +  +R DA
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM----ELANDLVRIDA 574

Query: 440 VT 441
           ++
Sbjct: 575 IS 576



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/399 (23%), Positives = 174/399 (43%), Gaps = 40/399 (10%)

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C+      +  ++  M  K  +P+V+  + +I G+     +  A+ +   ++  G   D 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +YN +++ + K+ R ++A  V   M S     D VTYN ++G    +GK D   ++  Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           + +D   P ++TY+ LI+     G   EA+++  E    GLK D+  Y+ +I  +CK G+
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAM 583
           V+ A  ++  +  +G  P+V++YN ++ A                + GK +E   L   M
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRAL--------------LNQGKWEEGEKLMTKM 324

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
            S+         + D  ++  +  L+      GK E          + + + M +  + P
Sbjct: 325 FSE---------KCDPNVV-TYSILITTLCRDGKIEE--------AMNLLKLMKEKGLTP 366

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWVQALS 699
           +  ++  ++ A  R    + A   LE +     L D   Y      L   ++    QAL 
Sbjct: 367 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC--KNGKADQALE 424

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           +F ++  +  S  S+ YN +   LW  G K  A  ++LE
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 218/449 (48%), Gaps = 48/449 (10%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           F  ++ +  +S +    +S+F  M+   +KPN V +N +I+  C  G + F     +   
Sbjct: 73  FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPF--AFSVLAK 130

Query: 290 MLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +L+ G +PD IT N+ +   C +G + +A  N  +++V  G   D  +Y TL++ +CK  
Sbjct: 131 ILKMGYEPDTITLNTFIKGFCLKGQIHQAL-NFHDKLVALGFHLDQVSYGTLINGLCKVG 189

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +   A E++  +  K +  +VV YST+ID   K   ++DA +++SEM    I  + V+Y+
Sbjct: 190 ETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYS 249

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            ++S +  +G+ ++A+ +  +M S  I  D  T+N L+  + K+G+  E +     M   
Sbjct: 250 ALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQ 309

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + P+++TY++L+D Y        A  I       G+ A V  Y+ +I+  CK  +V+ A
Sbjct: 310 GIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQA 369

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKE----SANLDA 582
           + L  EM  + I PNV+TYNS+ID   +S      ++  D+  D G+Q +    S+ LDA
Sbjct: 370 MKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDA 429

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
           +C              N ++     L+ +   QG                        I+
Sbjct: 430 LCK-------------NHLVDKAIALLIKLKDQG------------------------IR 452

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEEL 671
           PN+ T++ +++   +    EDA  + E+L
Sbjct: 453 PNMYTYTILIDGLCKGGRLEDARNIFEDL 481



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 186/356 (52%), Gaps = 3/356 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + S +I  + +   V+ A +++   ++    + +  +SALIS +   G  ++AI +FN M
Sbjct: 212 MYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKM 271

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
              N+ P++ T+N ++DA C +G V  K        M++ G++PD +T+NSL+       
Sbjct: 272 TSENINPDVYTFNILVDAFCKEGRV--KEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVN 329

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
               A+++ N M HRG+   + +YN +++  CK   +D A ++  EM  K I PNV+TY+
Sbjct: 330 EVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYN 389

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           ++IDG  K+GR+  AL +   M   G   D ++Y+++L    K    ++A+ +  +++  
Sbjct: 390 SLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQ 449

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GIR +  TY  L+ G  K G+ ++ R +FE +     +  + TY+ +I  +   GL+ EA
Sbjct: 450 GIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEA 509

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
           + +  + K      D + Y  +I +L      + A  LL EM   G+  + + Y S
Sbjct: 510 LSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGS 565



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 191/379 (50%), Gaps = 31/379 (8%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           D    V +F+ +LR    P  + F  +L    +   +    +LF +M +RGI  +   +N
Sbjct: 50  DVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFN 109

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L++  C+   +  AF ++A++      P+ +T +T I G+   G++  ALN   ++  L
Sbjct: 110 ILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVAL 169

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G  LD+VSY T+++   K+G    AL + + ++   ++ D V Y+ ++    K    ++ 
Sbjct: 170 GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDA 229

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             ++ +M +  +S N++TYS LI  +   G  K+A+ +F +     +  DV  ++ L+DA
Sbjct: 230 FDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDA 289

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
            CK G V+ A + L  M K+GI+P++VTYNS++D +       C V++V  ++ K     
Sbjct: 290 FCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGY-------CLVNEV--NMAKS---- 336

Query: 579 NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
               + +   + V    R+ N +I  F ++  +   Q  K             +F++MH 
Sbjct: 337 ---ILNTMSHRGVTATVRSYNIVINGFCKI--KMVDQAMK-------------LFKEMHH 378

Query: 639 LKIKPNVVTFSAILNACSR 657
            +I PNV+T++++++   +
Sbjct: 379 KQIFPNVITYNSLIDGLCK 397



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 204/392 (52%), Gaps = 14/392 (3%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++  A N  +  +  G+     ++  LI+   + G  + A+ +   +    ++ ++V Y
Sbjct: 154 GQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMY 213

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEM 325
           + +ID+  K   +     +++ +M+   +  + +T+++L++  C  G L +A   LFN+M
Sbjct: 214 STIIDSMCKDK-NVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAI-GLFNKM 271

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
               I+ D++T+N L+DA CK  ++  A   +A M  + I P++VTY++++DGY     +
Sbjct: 272 TSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEV 331

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           + A ++ + M   G+     SYN V++ + K+   ++A+ + KEM    I  + +TYN+L
Sbjct: 332 NMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSL 391

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K G+      + + M      P+++TYS+++D   K  L  +A+ +  + K  G+
Sbjct: 392 IDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGI 451

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           + ++  Y+ LID LCK G +E A ++ +++  +G    V TY  +I  F     +    D
Sbjct: 452 RPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGF----CSHGLFD 507

Query: 566 DVERDLGKQKESANL-DA------MCSQDDKD 590
           +    L K K+++ + DA      +CS  DKD
Sbjct: 508 EALSLLSKMKDNSCIPDAITYEIIICSLFDKD 539



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 190/433 (43%), Gaps = 83/433 (19%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+IS    +GK+  A  +F    +E     VY F+ L+ A+ + G  +EA +    M +
Sbjct: 249 SALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMK 308

Query: 257 YNLKPNLVTYNAVIDA------------------------------------CGKGGVDF 280
             +KP++VTYN+++D                                     C    VD 
Sbjct: 309 QGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVD- 367

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
              +++F +M    + P+ IT+NSL+    + G    A  L + M  RG   DI TY+++
Sbjct: 368 -QAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSI 426

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           LDA+CK   +D A  ++ ++  + I PN+ TY+ +IDG  K GRL+DA N+F ++   G 
Sbjct: 427 LDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGY 486

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
            L   +Y  ++  +   G F+EAL +  +M+ +    DA+TY  ++     + + D+  +
Sbjct: 487 NLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEK 546

Query: 461 MFEQMKADCVSPNLLTYST---------------------------------LIDVYSKG 487
           +  +M    +  + L Y +                                 L  +Y   
Sbjct: 547 LLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDC 606

Query: 488 GLYKEAMQ----------IFR--EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
            L K  M+          I+   ++ + G   DV  Y+ +I   C +GL + +++LL +M
Sbjct: 607 VLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKM 666

Query: 536 TKEGIRPNVVTYN 548
              G  P+ VTY+
Sbjct: 667 EVNGCIPDAVTYD 679



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 101/451 (22%), Positives = 183/451 (40%), Gaps = 89/451 (19%)

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A +LFN ++ +        +  +L ++ K         +  +M  + I PN V ++ +I+
Sbjct: 54  AVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILIN 113

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            + + G +  A ++ +++  +G   D ++ NT +  +   G+  +AL    ++ + G   
Sbjct: 114 CFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 173

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D V+Y  L+ G  K G+      +  ++    V  +++ YST+ID   K     +A  ++
Sbjct: 174 DQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLY 233

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E     + +++V YSALI   C  G ++ A+ L ++MT E I P+V T+N ++DAF + 
Sbjct: 234 SEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKE 293

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
                         G+ KE+ N  AM                                  
Sbjct: 294 --------------GRVKEAKNGLAM---------------------------------- 305

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQ 677
                             M K  IKP++VT+          NS  D   L+ E+ +  + 
Sbjct: 306 ------------------MMKQGIKPDIVTY----------NSLMDGYCLVNEVNMAKSI 337

Query: 678 VYGVAH-GLLMGYRD-NIWV----------QALSLFDEVKLMDSSTASAFYNALTDMLWH 725
           +  ++H G+    R  NI +          QA+ LF E+           YN+L D L  
Sbjct: 338 LNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCK 397

Query: 726 FGQKRGA-QLVVLEGKRRQVWENVWSESCLD 755
            G+   A +L+ L   R Q  + +   S LD
Sbjct: 398 SGRISYALELIDLMHDRGQQPDIITYSSILD 428


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 186/366 (50%), Gaps = 1/366 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           AS ++    + G+V  A+ + +     G       +++L+ AY R         +   M+
Sbjct: 70  ASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVME 129

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              ++P + TY  ++D       D   V  +F++M    +  D   ++S++    R G  
Sbjct: 130 NEGIEPTVGTYTILVDGL-SAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNV 188

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  +F+E V  GI+ +  TY  L++  CK  QM+ A  ++ +M  + +  N + ++TM
Sbjct: 189 RRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTM 248

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDGY +   +D AL +   M+ +GI LD  +YNT+     +  R +EA  + + M   G+
Sbjct: 249 IDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGV 308

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R + V+Y  L+  +  +G   E RR+F +M  +   P+L+TY+ ++D Y K G  +EA +
Sbjct: 309 RPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAER 368

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
              E ++ GL  D+  Y+AL+   C NG V+ A+ L +EM + G +PN+V Y ++I    
Sbjct: 369 FKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLA 428

Query: 556 RSATTE 561
           +   +E
Sbjct: 429 KEGRSE 434



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 181/345 (52%), Gaps = 1/345 (0%)

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
           D    + +   NEG   TV  ++ L+     +    +  +VF  MK  NL  ++  Y++V
Sbjct: 119 DRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSV 178

Query: 270 IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
           I+A  + G + +   E+FD+ + NG++P+  T+ +L+    + G  EAA  L  +M  RG
Sbjct: 179 INAYCRAG-NVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 237

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           +  +   +NT++D  C+   +D A EI   M    I  +V TY+T+  G  +A R+D+A 
Sbjct: 238 VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAK 297

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
           N+   M   G+  + VSY T++SI+   G   EA  + +EM  +G     VTYN ++ GY
Sbjct: 298 NLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGY 357

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            K+G   E  R   +M+   + P++ +Y+ L+  +   G    A+++F E KQ G K ++
Sbjct: 358 IKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNL 417

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           V Y+ALI  L K G  E A  L D M  +G+ P+   Y++++ + 
Sbjct: 418 VAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 462



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 158/353 (44%), Gaps = 35/353 (9%)

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           +S + V+  Y K GR   A  +  EM   G++ +A+ YN+LL  Y ++   D V  M + 
Sbjct: 68  LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 127

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M+ + + P + TY+ L+D  S      +   +F E K   L  DV  YS++I+A C+ G 
Sbjct: 128 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 187

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           V  A  + DE    GI PN  TY ++I+ F       C +         Q E+A +    
Sbjct: 188 VRRASEVFDECVGNGIEPNEHTYGALINGF-------CKI--------GQMEAAEMLV-- 230

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL-CILGVFQKMHKLKIKP 643
                D+Q  G   NQI  VF  ++         +  CR+ ++   L +   M K+ I+ 
Sbjct: 231 ----TDMQVRGVGINQI--VFNTMI---------DGYCRKNMVDKALEIKMIMEKMGIEL 275

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDN--IWVQALSLF 701
           +V T++ +     R N  ++A  LL  +     +   V++  L+    N    V+A  LF
Sbjct: 276 DVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLF 335

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
            E+    +  +   YN + D     G  R A+    E +++ +  +++S + L
Sbjct: 336 REMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAAL 388



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GKVD+A  +FE     G    + A++ALIS   + G  +EA  ++++M    L P+   Y
Sbjct: 396 GKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALY 455

Query: 267 NAVI 270
           +A++
Sbjct: 456 SALV 459


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 241/526 (45%), Gaps = 57/526 (10%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ ++     +GE  +A +     V R+    D     S ++  L R GK+D A  +   
Sbjct: 48  YSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTS-VVDGLCRDGKMDRACEMVRE 106

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
              +G     + FSALI+ +  +    EA+ ++  +   + + + V+ +A+I   C +  
Sbjct: 107 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERR 166

Query: 278 VDFKHVVEIFDDM--LRNGV-QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           +   +  E+F +M    +G  +PD +T+ +L+    + G  E A  +   M  R    ++
Sbjct: 167 IGEAY--ELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNV 224

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TY++LL  +CK   +D A ++   M +K   PNVVTY+T+I G   A ++D A  +  E
Sbjct: 225 VTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDE 284

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M       D VSYN +L  Y +LGR EEA  + KEM +     D +TY  L+ G+    +
Sbjct: 285 MTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASR 344

Query: 455 YDEVRRMFEQMK-ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
            +E R + E MK A  + P+++TYS ++  YS+   + EA +  +E     +  + V YS
Sbjct: 345 LEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYS 404

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           +LID LCK G V  A+ +L  + K    P+VVTY  +I+         C  D  E  L  
Sbjct: 405 SLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGL-------CGTDRTEEALTL 453

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
            +E  N         K V+ +  T N +I                        LC LG  
Sbjct: 454 LEEMVN---------KRVEPSVGTFNSVIGA----------------------LCRLGDM 482

Query: 634 QKMHKLKI-------KPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            +  KL +       +P +VT++ +L   SR    E A  L E +R
Sbjct: 483 DEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMR 528



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 236/505 (46%), Gaps = 69/505 (13%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKR-YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           ++ +++   ++    +A  V   M+   ++ P+LVTY+ VI+  C +G +D     EI  
Sbjct: 12  YNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMD--RACEILR 69

Query: 289 DML-RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL------- 340
           +M+ R+G+ PD +T+ S++    R G  + A  +  EM  +G++ D FT++ L       
Sbjct: 70  EMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNA 129

Query: 341 -------------------LDAI---------CKGAQMDLAFEIMAEMPAKNI---SPNV 369
                              LDA+         C+  ++  A+E+  EM  +      P+V
Sbjct: 130 RKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDV 189

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           VTY+ +IDG+ K+G L+ A+ M   M+      + V+Y+++L    K G  ++AL + + 
Sbjct: 190 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M S G   + VTY  L+ G     K D  R + ++M A C   + ++Y+ L+D Y + G 
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM-TKEGIRPNVVTYN 548
            +EA Q+F+E        D + Y+ L+   C    +E A  LL+ M T  GI P+VVTY+
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369

Query: 549 SIIDAFGRSA----TTECTVDDVERDLGKQ--KESANLDAMCS--QDDKDVQEAGRTDNQ 600
            ++  + R+       E   + + R++       S+ +D +C   + +  ++     D  
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKP 429

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
            +  +  ++    G  + E          L + ++M   +++P+V TF++++ A  R   
Sbjct: 430 DVVTYTIVIEGLCGTDRTEE--------ALTLLEEMVNKRVEPSVGTFNSVIGALCRLGD 481

Query: 661 FEDASMLLEELRLFDNQVYGVAHGL 685
            ++A  LL         V   AHGL
Sbjct: 482 MDEAWKLL---------VAMAAHGL 497



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 203/407 (49%), Gaps = 42/407 (10%)

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH-RGIDQDIFTYNTLLDAICKGAQ 349
           +R  V P+  T+N ++    +  L   A  +  EM   + +  D+ TY+T+++  CK  +
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 350 MDLAFEIMAEMPAKN-ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           MD A EI+ EM  ++ ++P+VVTY++++DG  + G++D A  M  EMK  G+  D+ +++
Sbjct: 61  MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA- 467
            +++ +    + +EAL + KE+ +S  R DAV+ +AL+ G  ++ +  E   +F++M+  
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180

Query: 468 --DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
                 P+++TY+ LID + K G  ++AM++    +      +VV YS+L+  LCK G +
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS-------------ATTECTVDDVERDLG 572
           + A+ L   MT +G  PNVVTY ++I     +               T C  D V  +  
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYN-- 298

Query: 573 KQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
                A LD  C          GR + +  ++F ++ A+     +    C     C    
Sbjct: 299 -----ALLDGYC--------RLGRIE-EAKQLFKEMAAKSCLPDRITYTCLVRGFCNASR 344

Query: 633 FQKMHKL--------KIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            ++   L         I P+VVT+S ++   SR   F +A+  ++E+
Sbjct: 345 LEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEM 391



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 190/374 (50%), Gaps = 15/374 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S+++  L + G +D A ++F    ++G    V  ++ LI     +     A  + + M  
Sbjct: 228 SSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTA 287

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
                + V+YNA++D  C  G ++     ++F +M      PDRIT+  L+   C+   L
Sbjct: 288 TCCPADTVSYNALLDGYCRLGRIE--EAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRL 345

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA   L N     GID D+ TY+ ++    +  +   A E + EM A+N++PN VTYS+
Sbjct: 346 EEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSS 405

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDG  KAGR++ A+ +   +       D V+Y  V+       R EEAL + +EM +  
Sbjct: 406 LIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKR 461

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +     T+N+++G   + G  DE  ++   M A  + P ++TY+TL++ +S+ G  + A 
Sbjct: 462 VEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAY 521

Query: 495 QIF----REFKQAGLKADVV---LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           ++F    R+ K++   A++V    +SALI  LCK   ++ A+++++E+      P     
Sbjct: 522 ELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDC 581

Query: 548 NSIIDAFGRSATTE 561
            +I+D   R+  TE
Sbjct: 582 LAIVDGLLRAGRTE 595



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 99/211 (46%), Gaps = 12/211 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++I  L + G+V+ A  + +          V  ++ +I     +   +EA+++   M  
Sbjct: 404 SSLIDGLCKAGRVNHAMEVLKNVDKPD----VVTYTIVIEGLCGTDRTEEALTLLEEMVN 459

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P++ T+N+VI A  + G D     ++   M  +G++P  +T+ +LL   SR G  E
Sbjct: 460 KRVEPSVGTFNSVIGALCRLG-DMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRME 518

Query: 317 AARNLFNEMVHRGIDQDIFT-------YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
            A  LF  M  +               ++ L+  +CK  ++D A  ++ E+ ++   P  
Sbjct: 519 IAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAE 578

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
                ++DG  +AGR ++A  + + +  +G+
Sbjct: 579 EDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 183/349 (52%), Gaps = 1/349 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L  LGKV+ A N+++  + +G   ++ +++ +I  + + G   +A  V N +    LKPN
Sbjct: 441 LCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPN 500

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
            +TY  +++   K G D +H   +FD M+  G+ P   TFNS++    + G    AR+  
Sbjct: 501 AITYTILMEGSFKKG-DCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKL 559

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           N  + +       TYN ++D   K   +D A  +  EM    ISPNV+TY+++I+G+ K+
Sbjct: 560 NTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKS 619

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
            ++D AL M  +MK  G+ LD   Y T+++ + K+   E A     ++   G+  + + Y
Sbjct: 620 NKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVY 679

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           N ++  Y      +    + ++M  + +  +L  Y++LID   K G    A+ ++ E   
Sbjct: 680 NIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLC 739

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            G+  D+ +Y+ LI+ LC +G +E+A  +L EM    I P V+ YN++I
Sbjct: 740 RGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLI 788



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 152/594 (25%), Positives = 271/594 (45%), Gaps = 53/594 (8%)

Query: 156 ADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK 213
            D YT   L+R     G++ +A + F  A  R  + +      S +I  + R   +DLA 
Sbjct: 220 GDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAAS--YSIVIQAVCRGSDLDLAS 277

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA- 272
            + E     G+  +   ++A+I A  R G   EA+ + + M    +  N+    ++I   
Sbjct: 278 KLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGY 337

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C +G  D    + +FD+++  GV P+   F+ L+  CS+ G  E A  L+  M   G+  
Sbjct: 338 CVRG--DVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQP 395

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
            +F  N LL    K   ++ A+ ++ +   +N   +VVTY+ ++    + G++++A N++
Sbjct: 396 TVFILNFLLKGFRKQNLLENAY-LLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLW 454

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            +M   GI    VSYN ++  + K G  ++A  V   +  SG++ +A+TY  L+ G  K+
Sbjct: 455 DKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKK 514

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G  +    MF+QM A  + P   T++++I+   K G   EA      F +       + Y
Sbjct: 515 GDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTY 574

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV---DDVER 569
           + +ID   K G ++SA S+  EM +  I PNV+TY S+I+ F +S   +  +   DD++R
Sbjct: 575 NCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKR 634

Query: 570 DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI 629
                 +   LD                    I V+  L+A        EN C+      
Sbjct: 635 ------KGLELD--------------------ITVYATLIAGFCKMQDMENACK------ 662

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVY-GVAHG 684
              F K+ ++ + PN + ++ +++A    N+ E A  L +E+       D ++Y  +  G
Sbjct: 663 --FFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDG 720

Query: 685 LLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           LL   ++     AL L+ E+           YN L + L + GQ   A  ++ E
Sbjct: 721 LL---KEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKE 771



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 121/510 (23%), Positives = 226/510 (44%), Gaps = 68/510 (13%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I    RLG    A  + +  ++      V   ++LI  Y   G    A+ +F+ +  
Sbjct: 296 AAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVE 355

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN+  ++ +I+ C K G + +   E++  M   G+QP     N LL    +  L E
Sbjct: 356 VGVTPNVAIFSVLIEWCSKIG-NVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLE 414

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L +  V  GI   + TYN +L  +C+  +++ A  +  +M  K I+P++V+Y+ MI
Sbjct: 415 NAYLLLDGAVENGI-ASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMI 473

Query: 377 DGYAKAGRLDD-----------------------------------ALNMFSEMKFLGIG 401
            G+ K G +DD                                   A NMF +M   GI 
Sbjct: 474 LGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIV 533

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
               ++N++++   K+GR  EA               ++TYN ++ GY K+G  D    +
Sbjct: 534 PTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESV 593

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           + +M    +SPN++TY++LI+ + K      A+++  + K+ GL+ D+ +Y+ LI   CK
Sbjct: 594 YREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCK 653

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
              +E+A     ++ + G+ PN + YN +I A+         ++++E  L   KE  N  
Sbjct: 654 MQDMENACKFFSKLLEVGLTPNTIVYNIMISAYR-------NLNNMEAALNLHKEMINNK 706

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
             C                 +K++  L+     +GK        +   L ++ +M    I
Sbjct: 707 IPCD----------------LKIYTSLIDGLLKEGK--------LSFALDLYSEMLCRGI 742

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            P++  ++ ++N        E+A  +L+E+
Sbjct: 743 VPDIFMYNVLINGLCNHGQLENAGKILKEM 772



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 129/268 (48%), Gaps = 1/268 (0%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           VE F  ML +GV P     N LL    R  + E A  LF+EM  R I  D +T   L+ A
Sbjct: 172 VECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRA 231

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
             KG +   A     +   + +  +  +YS +I    +   LD A  +    + LG    
Sbjct: 232 CLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPS 291

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +Y  V+    +LG F EAL +  EM  S +  +     +L+ GY  +G  +   R+F+
Sbjct: 292 EGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFD 351

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           ++    V+PN+  +S LI+  SK G  ++A +++   K  GL+  V + + L+    K  
Sbjct: 352 EVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQN 411

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSII 551
           L+E+A  LLD   + GI  +VVTYN ++
Sbjct: 412 LLENAYLLLDGAVENGI-ASVVTYNIVL 438



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 146/327 (44%), Gaps = 36/327 (11%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
           A  YT L+     +G+   A   F   V       D     +++I+ L ++G+V  A++ 
Sbjct: 501 AITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYT--FNSIINGLCKVGRVSEARDK 558

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
             T + + +  T   ++ +I  Y + G    A SV+  M R  + PN++TY ++I+   K
Sbjct: 559 LNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCK 618

Query: 276 GG----------------------------------VDFKHVVEIFDDMLRNGVQPDRIT 301
                                                D ++  + F  +L  G+ P+ I 
Sbjct: 619 SNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIV 678

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           +N +++        EAA NL  EM++  I  D+  Y +L+D + K  ++  A ++ +EM 
Sbjct: 679 YNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEML 738

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            + I P++  Y+ +I+G    G+L++A  +  EM    I    + YNT+++ + K G  +
Sbjct: 739 CRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQ 798

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGG 448
           EA  +  EM   G+  D  TY+ L+ G
Sbjct: 799 EAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 126/303 (41%), Gaps = 35/303 (11%)

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D   +N +L  Y +  +  EA+   + M   G+       N LL    ++   ++  R+F
Sbjct: 151 DSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLF 210

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           ++M    +  +  T   L+    KGG + EA + F +    GLK D   YS +I A+C+ 
Sbjct: 211 DEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRG 270

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-D 581
             ++ A  L++   + G  P+  TY ++I A  R              LG   E+  L D
Sbjct: 271 SDLDLASKLVEGDEELGWVPSEGTYAAVIGACVR--------------LGNFGEALRLKD 316

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
            M    D  V         +IK  G  V             R ++   L +F ++ ++ +
Sbjct: 317 EMV---DSRVPVNVAVATSLIK--GYCV-------------RGDVNSALRLFDEVVEVGV 358

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQ-VYGVAHGLLMGYR-DNIWVQALS 699
            PNV  FS ++  CS+  + E A+ L   ++    Q    + + LL G+R  N+   A  
Sbjct: 359 TPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYL 418

Query: 700 LFD 702
           L D
Sbjct: 419 LLD 421


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 196/384 (51%), Gaps = 39/384 (10%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V  A ++    ++ G+      +  +I+   + G  ++AI +F  MK+  + PNL+ Y
Sbjct: 154 GRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMY 213

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N VID  C +G VD      +  +M+ NG++ D  ++NS++      G ++AA  L +EM
Sbjct: 214 NTVIDGLCKQGLVD--EACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEM 271

Query: 326 VHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMA-------------------------- 358
           V RG +  D++T+N L+D +CK  ++  A+ ++A                          
Sbjct: 272 VVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGS 331

Query: 359 ---------EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
                    +M  +   PNV++Y T+I+GY K   +D+A+ + +EM    +  D V+YN 
Sbjct: 332 VGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNC 391

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +L   +K GR      + + M +SG   D +TYN LL  Y K  K+D+   +F+ +    
Sbjct: 392 LLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIG 451

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           +SPN+ TY+ L+D   K G  K A +IF+     G + ++  Y+ +I  LCK G ++ A 
Sbjct: 452 ISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAE 511

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDA 553
           +LL +M      PN +T+++I+ A
Sbjct: 512 ALLYKMVNNNYLPNYITFDTIVRA 535



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 218/452 (48%), Gaps = 32/452 (7%)

Query: 245 QEAISVFNSMKRYN--------------LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
            + +S    +KRYN              +KP+L+T++ +I+A  + G        +  ++
Sbjct: 73  NKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLG-QMGFAFSLLGNI 131

Query: 291 LRNGVQPD-RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           L+ G Q D RI    +  +C +G + EA  +L +E V RG   D   Y T+++ +CK  +
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAV-SLLHEYVDRGFRFDEVCYGTIINGLCKIGK 190

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              A ++  +M    + PN++ Y+T+IDG  K G +D+A  + +EM   GI LD  SYN+
Sbjct: 191 TRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNS 250

Query: 410 VLSIYAKLGRFEEALLVCKEMESSG-IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           ++  +  +GRF+ A+ +  EM   G +  D  T+N L+ G  K G+  E   +   M   
Sbjct: 251 MIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKR 310

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
              P++++Y+ L++ Y   G   EA Q+F +  +     +V+ Y  LI+  CK  +V+ A
Sbjct: 311 GWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEA 370

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESANLDAMCSQ 586
           + LL EM  + + P+ VTYN ++D   +S  +    D VE  R  G+  +    + +   
Sbjct: 371 MVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLL-- 428

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKL 639
           DD    E     ++ + +F  ++        +      + LC  G       +FQ +   
Sbjct: 429 DDYFKHEKF---DKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAK 485

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             +PN+ T++ +++   +    ++A  LL ++
Sbjct: 486 GCQPNIRTYNIMIHGLCKEGFLDEAEALLYKM 517



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 180/363 (49%), Gaps = 2/363 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+   +LG++  A ++    L  G+   V   + L+      G   EA+S+ +    
Sbjct: 109 SILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVD 168

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              + + V Y  +I+   K G   +  +++F  M +  V P+ I +N+++    + GL +
Sbjct: 169 RGFRFDEVCYGTIINGLCKIG-KTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVD 227

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYSTM 375
            A  L  EMV  GI+ D+++YN+++   C   +   A +++ EM  +  + P+V T++ +
Sbjct: 228 EACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNIL 287

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K GR+ +A N+ + M   G   D VSYN +++ Y   G   EA  V  +M     
Sbjct: 288 IDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTA 347

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + ++Y  L+ GY K    DE   +  +M    + P+ +TY+ L+D  SK G       
Sbjct: 348 LPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWD 407

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +    + +G  AD++ Y+ L+D   K+   + A++L   + + GI PN+ TYN ++D   
Sbjct: 408 LVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLC 467

Query: 556 RSA 558
           +S 
Sbjct: 468 KSG 470



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 160/339 (47%), Gaps = 37/339 (10%)

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           +N LL  + K  + +    +   + +K  I P+++T+S +I+ +A+ G++  A ++   +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
             +G  +D     T++      GR  EA+ +  E    G R D V Y  ++ G  K GK 
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            +  +MF +MK   V PNL+ Y+T+ID   K GL  EA  +  E  + G++ DV  Y+++
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 516 IDALCKNGLVESAVSLLDEMTKEG-IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           I   C  G  ++AV LLDEM   G + P+V T+N +ID   +              LG+ 
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCK--------------LGRV 297

Query: 575 KESANLDAMCSQD--DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
            E+ N+ A+  +     D+       N      G  ++   G+ K+             V
Sbjct: 298 SEAYNVVAVMIKRGWKPDIVSYNALMN------GYCLSGSVGEAKQ-------------V 338

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           F KM +    PNV+++  ++N   +    ++A +LL E+
Sbjct: 339 FDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEM 377


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 193/399 (48%), Gaps = 10/399 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L R G+++ A  + +  +      + + F+ LI+ Y   G  ++A ++   M+ 
Sbjct: 272 NVVINGLARKGELEKAAQLVDR-MRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMEN 330

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             + P +VTYN +I    + G + +     F +M   G+ PD IT+NSL+   C  G L 
Sbjct: 331 EGIVPTVVTYNTIIHGMFRSG-NVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLK 389

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA   LF ++   G+   + TYN LLD  C+   ++ A     EM  +   P+V TY+ +
Sbjct: 390 EALW-LFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTIL 448

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ++G  K   L      F EM   G+  D  +YNT +S    LG   EA  + + M S GI
Sbjct: 449 MNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGI 508

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VTYN  L G  K G   +   ++ +M +D + P+ +TY+ LI  + + G  +EA  
Sbjct: 509 SSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARD 568

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           IF     +GL    V Y+  I A C+ G + SA     +M +EG+RPN VTYN +I A  
Sbjct: 569 IFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALC 628

Query: 556 RSATTECTVDD----VERDLGKQKESANL--DAMCSQDD 588
           R   T          +ER L   K +  L  D  C + +
Sbjct: 629 RMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGN 667



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 179/358 (50%), Gaps = 1/358 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  + R G V+ A+  F      G    +  +++LI+ Y ++G  +EA+ +F  +KR
Sbjct: 341 NTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKR 400

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P+++TYN ++D   + G D +       +M+  G QPD  T+  L+    +     
Sbjct: 401 AGLAPSVLTYNILLDGYCRLG-DLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLA 459

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
             R  F+EM+ +G+  D F YNT + A         AF++   M ++ IS + VTY+  +
Sbjct: 460 MVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFL 519

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  K+G L DA  ++ +M   G+  D ++Y  ++  + + GR  EA  +   M  SG+ 
Sbjct: 520 DGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLP 579

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             AVTY   +  Y ++G        F++M  + V PN +TY+ LI    + G    A Q 
Sbjct: 580 PSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQH 639

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           F E  + GL  +   Y+ LID  CK G  E A+ L  EM + GI P+  T+N++   F
Sbjct: 640 FHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 151/269 (56%), Gaps = 3/269 (1%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F +M  +GV P     N +L        W+  R+++ EM+  GI+  I TYNTLLD+  +
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 347 GAQMDLAFEIMAEMPAK--NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
             ++D A +++ EM A+     P+ VTY+ +I+G A+ G L+ A  +   M+ +      
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKKASA 302

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            ++N +++ Y   G  E+A  +  EME+ GI    VTYN ++ G  + G  +  R  F +
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M+A  + P+L+TY++LI+ Y K G  KEA+ +F + K+AGL   V+ Y+ L+D  C+ G 
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGD 422

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           +E A     EM ++G +P+V TY  +++ 
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMNG 451



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/532 (23%), Positives = 228/532 (42%), Gaps = 109/532 (20%)

Query: 248 ISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA 307
           ++ F  M  + + P +   N V+ A  +    +  +  ++ +ML+ G++P  +T+N+LL 
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRAL-RDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLD 239

Query: 308 VCSRGGLWEAARNLFNEMVHR--GIDQDIFTYNTLLDAICKGAQMDLAFEIM-------- 357
              R G  + A  L  EM  R  G      TYN +++ + +  +++ A +++        
Sbjct: 240 SFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKK 299

Query: 358 --------------------------AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
                                      EM  + I P VVTY+T+I G  ++G ++ A   
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F EM+ +G+  D ++YN++++ Y K G  +EAL +  +++ +G+    +TYN LL GY +
Sbjct: 360 FVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCR 419

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLI-----------------DVYSKG------- 487
            G  +E RR  ++M      P++ TY+ L+                 ++ SKG       
Sbjct: 420 LGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFA 479

Query: 488 -----------GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
                      G   EA Q+       G+ +D V Y+  +D LCK+G ++ A  L  +M 
Sbjct: 480 YNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMV 539

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCSQDDKDVQEAG 595
            +G++P+ +TY  +I A              ER  G+ +E+ ++ D M       +  + 
Sbjct: 540 SDGLQPDCITYTCLIHA------------HCER--GRLREARDIFDGMLVS---GLPPSA 582

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNA 654
            T    I  +                CR+  +    G FQKM +  ++PN VT++ +++A
Sbjct: 583 VTYTVFIHAY----------------CRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHA 626

Query: 655 CSRCNSFEDASMLLEEL--RLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEV 704
             R      A     E+  R      Y     +    ++  W +A+ L+ E+
Sbjct: 627 LCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEM 678



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 116/246 (47%), Gaps = 36/246 (14%)

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
           L      EM    + P +   + ++       R DD  ++++EM  LGI    V+YNT+L
Sbjct: 179 LCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLL 238

Query: 412 SIYAKLGRFEEALLVCKEMES--SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA-- 467
             + + GR ++A  + +EME+   G     VTYN ++ G  ++G+ ++  ++ ++M+   
Sbjct: 239 DSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK 298

Query: 468 --------------------------------DCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
                                           + + P ++TY+T+I    + G  + A  
Sbjct: 299 KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARM 358

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            F E +  GL  D++ Y++LI+  CK G ++ A+ L  ++ + G+ P+V+TYN ++D + 
Sbjct: 359 KFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYC 418

Query: 556 RSATTE 561
           R    E
Sbjct: 419 RLGDLE 424



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 118/295 (40%), Gaps = 48/295 (16%)

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F +M    V P +   + ++        + +   ++ E  Q G++  +V Y+ L+D+  +
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 522 NGLVESAVSLLDEMTKE--GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
            G V+ A  LL EM     G  P+ VTYN +I+   R    E     V+R    +K SA 
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAF 303

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIK-VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
                            T N +I   F +   EKAG  + E                M  
Sbjct: 304 -----------------TFNPLITGYFARGSVEKAGALQLE----------------MEN 330

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGY-RDNI 693
             I P VVT++ I++   R  + E A M   E+R    L D   Y   + L+ GY +   
Sbjct: 331 EGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITY---NSLINGYCKAGN 387

Query: 694 WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ----KRGAQLVVLEGKRRQV 744
             +AL LF ++K    + +   YN L D     G     +R  Q +V +G +  V
Sbjct: 388 LKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDV 442



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 4/136 (2%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
           A  YT  +     RG    A   F   ++   R N+     + +I  L R+G+ +LA   
Sbjct: 582 AVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTY--NVLIHALCRMGRTNLAYQH 639

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
           F   L  G     Y ++ LI    + G  +EAI +++ M ++ + P+  T+NA+     +
Sbjct: 640 FHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDE 699

Query: 276 GGVDFKHVVEIFDDML 291
           G    KH ++  ++++
Sbjct: 700 G--QSKHAIQYMENVV 713


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 185/365 (50%), Gaps = 4/365 (1%)

Query: 190 NDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS 249
           +D   L SA+  +    G +    ++   AL  G    + A+S L++   R     EA +
Sbjct: 172 DDPAPLVSAVAKVYADEGLLPDGCSLLLLALRRGIRVPMPAWSDLMN---RLPSVPEAYA 228

Query: 250 VFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC 309
            +  +    + P    +N ++    + G        +FD+MLR GVQP  +TFN+L++  
Sbjct: 229 FYLHLLDAGVPPEARQFNMLMRDMIRSG-KLASARNVFDEMLRRGVQPTVVTFNTLMSGM 287

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
            +      A  L   M   GI  D++TY   +  +CK  ++  A E+  EM  + ++PN 
Sbjct: 288 CKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNT 347

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           V  +T+ID + K G +   L +  EM   G+  D V+YN +++ + ++   + A  + +E
Sbjct: 348 VVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEE 407

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M   G++ D VTY  L+ G  K+G+ D    M ++M  + V+ + +TY+ LI   SK G 
Sbjct: 408 MRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGR 467

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
             +A +I  E  +AGL+ D   Y+ +IDA CKNG V++    L EM  +G  P +VTYN 
Sbjct: 468 SVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNV 527

Query: 550 IIDAF 554
           +++ F
Sbjct: 528 VMNGF 532



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 176/352 (50%), Gaps = 1/352 (0%)

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
           ++ RL  V  A   +   L+ G       F+ L+    RSG    A +VF+ M R  ++P
Sbjct: 216 LMNRLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQP 275

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
            +VT+N ++    K   D  +   +   M + G+ PD  T+ + +    + G  + A  +
Sbjct: 276 TVVTFNTLMSGMCKAS-DLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEM 334

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F EM  RG++ +     TL+DA CK   +    E+  EM  + +  ++V Y+ +++G+ +
Sbjct: 335 FEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCR 394

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
              +  A ++  EM+  G+  D+V+Y T++    K G  + A+ + +EM   G+  D VT
Sbjct: 395 VRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVT 454

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y AL+ G  K G+  +  R+  +M    + P+  TY+ +ID + K G  K   +  +E +
Sbjct: 455 YTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQ 514

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             G    +V Y+ +++  C  G +++A  LL+ M   G+ PN +TYN ++D 
Sbjct: 515 NKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDG 566



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 175/350 (50%), Gaps = 4/350 (1%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R GK+  A+N+F+  L  G   TV  F+ L+S   ++     A ++   M +  + P++ 
Sbjct: 254 RSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVY 313

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TY A I    K G   +  +E+F++M   G+ P+ +   +L+    + G   A   L  E
Sbjct: 314 TYGAFIQGLCKTG-RIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWE 372

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M  RG+  D+  YN L++  C+   M  A +I+ EM    + P+ VTY+T+IDG  K G 
Sbjct: 373 MATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGE 432

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD A+ M  EM   G+ LD V+Y  ++S  +K GR  +A  +  EM  +G++ D  TY  
Sbjct: 433 LDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTM 492

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++  + K G      +  ++M+    +P ++TY+ +++ +   G  K A  +       G
Sbjct: 493 VIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIG 552

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +  + + Y+ L+D  CK+G V     L    + +G+  +   Y S+I+ F
Sbjct: 553 VCPNDITYNILLDGHCKHGKVRDTEEL---KSAKGMVSDFGVYTSLINEF 599



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 159/357 (44%), Gaps = 37/357 (10%)

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A   +  ++  G+  +   +N L+  + +  ++  A  +  EM  + + P VVT++T++ 
Sbjct: 226 AYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMS 285

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  KA  L++A  +   M   GI  D  +Y   +    K GR ++A+ + +EM   G+  
Sbjct: 286 GMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNP 345

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + V    L+  + K+G       +  +M    V  +L+ Y+ L++ + +    K A  I 
Sbjct: 346 NTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIV 405

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E ++ GLK D V Y+ LID  CK G +++A+ +  EM+ EG+  + VTY ++I    ++
Sbjct: 406 EEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKA 465

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
             +     D ER L            C   +  +Q    T   +I  F +    K G   
Sbjct: 466 GRSV----DAERIL------------CEMMEAGLQPDNTTYTMVIDAFCKNGDVKTG--- 506

Query: 618 KENRCRQEILCILGVFQKMHKLKIK---PNVVTFSAILNACSRCNSFEDASMLLEEL 671
                          F+ + +++ K   P +VT++ ++N        ++A MLL  +
Sbjct: 507 ---------------FKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAM 548



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 88/197 (44%), Gaps = 28/197 (14%)

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA   +     AG+  +   ++ L+  + ++G + SA ++ DEM + G++P VVT+N+++
Sbjct: 225 EAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLM 284

Query: 552 DAFGRSATTECTVDDVERDLGKQ--------KESANLDAMCS----QDD----KDVQEAG 595
              G    ++    +  R L  +           A +  +C     QD     +++ E G
Sbjct: 285 S--GMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 342

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
              N +  V   L+     +G        ++   L +  +M    +K ++V ++A++N  
Sbjct: 343 LNPNTV--VLTTLIDAHCKEG--------DVTAGLELRWEMATRGVKADLVAYNALVNGF 392

Query: 656 SRCNSFEDASMLLEELR 672
            R    + A+ ++EE+R
Sbjct: 393 CRVRDMKAANDIVEEMR 409


>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 924

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 190/368 (51%), Gaps = 4/368 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I++  ++GK+  A  + +   + G  + +  +S LI+ + +      A ++F  + +  
Sbjct: 487 LINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDG 546

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           LKP++V YN +I A CG G +D    + +  +M +   +P   TF  ++   +R G  + 
Sbjct: 547 LKPDVVLYNNIIRAFCGMGTMD--RAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKR 604

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A ++F+ M   G    + T+N L+  + +  QM+ A EI+ EM    +SPN  TY+T++ 
Sbjct: 605 ALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMH 664

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GYA  G    A   F++++  G+ LD  +Y  +L    K GR + AL V KEM +  I +
Sbjct: 665 GYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPR 724

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +   YN L+ G+ ++G   E   + +QMK   V P++ TY++ I+   K G    A ++ 
Sbjct: 725 NTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMM 784

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-FGR 556
            E + +G+K +V  Y+ LI    +  L E A+    EM   G++P+   Y+ ++ A   R
Sbjct: 785 EEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSR 844

Query: 557 SATTECTV 564
           +  TE  V
Sbjct: 845 ATVTEAYV 852



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 140/578 (24%), Positives = 255/578 (44%), Gaps = 53/578 (9%)

Query: 172 WSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAF 231
           W   +  F   +K+  R+         M+S   R G +  A+  FE+    G   T + +
Sbjct: 291 WQDVVSAFE-RIKKPSRRE-----YGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVY 344

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK-GGVD-----FKHVVE 285
           ++LI AY      +EA+S    MK   ++ +LVTY+ ++    K G  D     FK   +
Sbjct: 345 TSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKD 404

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
               M  N +    I  N + A C    + + A  L  EM   GID  I  Y+T++D   
Sbjct: 405 RHSHM--NAI----IYGNMIYAYCQTCNM-DQAEALVREMEGEGIDAPIDIYHTMMDGYT 457

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
                +    +   +     +P+VV+Y  +I+ YAK G++  AL +   M+  GI  +  
Sbjct: 458 MVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMK 517

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y+ +++ + KL  +  A  + +++   G++ D V YN ++  +   G  D    M ++M
Sbjct: 518 TYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEM 577

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           + +   P   T+  +I  +++ G  K A+ +F   +++G    V  ++ALI  L +   +
Sbjct: 578 QKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQM 637

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESANLDAM 583
           E A+ +LDEM   G+ PN  TY +I+  +     T    +     RD G Q +    +A+
Sbjct: 638 EKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEAL 697

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC-----------RQEILCILGV 632
                K   ++GR  + +      +  E + Q    N             R ++     +
Sbjct: 698 L----KACCKSGRMQSAL-----AVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADL 748

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG------LL 686
            Q+M +  +KP++ T+++ +NAC +      AS ++EE+     +  GV         L+
Sbjct: 749 MQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEM-----ETSGVKPNVKTYTTLI 803

Query: 687 MGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
            G+ R ++  +AL  F E+KL       A Y+ L   L
Sbjct: 804 HGWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTAL 841



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 143/606 (23%), Positives = 264/606 (43%), Gaps = 82/606 (13%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           +++ VV  F+ + +    P R  +  +++  +R G    AR  F  M  RGI+     Y 
Sbjct: 290 NWQDVVSAFERIKK----PSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYT 345

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L+ A   G  M+ A     +M  + +  ++VTYS ++ G+AK G  D A   F E K  
Sbjct: 346 SLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDR 405

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
              ++ + Y  ++  Y +    ++A  + +EME  GI      Y+ ++ GY   G  ++ 
Sbjct: 406 HSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKC 465

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +FE++K    +P++++Y  LI++Y+K G   +A+++ +  + AG+K ++  YS LI+ 
Sbjct: 466 LTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLING 525

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
             K     +A ++ +++ K+G++P+VV YN+II AF       C +  ++R +   KE  
Sbjct: 526 FLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAF-------CGMGTMDRAICMVKE-- 576

Query: 579 NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
                  Q ++  +   RT   II  F      +AG+ K+           L VF  M +
Sbjct: 577 ------MQKERH-RPTSRTFMPIIHGFA-----RAGEMKR----------ALDVFDMMRR 614

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF-----DNQVYGVAHGL-LMGYRDN 692
               P V TF+A++         E A  +L+E+ L      ++    + HG   +G    
Sbjct: 615 SGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGK 674

Query: 693 IWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN----- 747
            +     L DE   +D  T    Y AL       G+ + A  V  E   + +  N     
Sbjct: 675 AFEYFTKLRDEGLQLDVYT----YEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYN 730

Query: 748 -----------VWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHEL--PKLL----- 789
                      VW  + L +  M  G  +  +H +   I++    G  L   K++     
Sbjct: 731 ILIDGWARRGDVWEAADL-MQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMET 789

Query: 790 -----------SILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPM 838
                      +++ GW + S  + + ALR   E+ L G+     V +C +   +S   +
Sbjct: 790 SGVKPNVKTYTTLIHGWARAS--LPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRATV 847

Query: 839 VASWLR 844
             +++R
Sbjct: 848 TEAYVR 853


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 173/329 (52%), Gaps = 5/329 (1%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V  +  ++  Y   G  + A+ + + M    L+ N   Y +VI   C KG V     + +
Sbjct: 287 VVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVS--DALRV 344

Query: 287 FDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
            +DM  +GV  D + F ++++  CS+G L  AAR LF EM  RG+  D  T+  L++ +C
Sbjct: 345 LEDMTMHGVALDAVVFTTVISGFCSKGDL-AAARRLFEEMQKRGLAADRVTHTALINGLC 403

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           +  ++  A  ++ EM  K +  +VVTY+ +IDGY K G + +A  + +EM    +  + V
Sbjct: 404 RAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVV 463

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y  +     K G    A  +  EM + G+  +  TYN+L+ G  K G  ++  R+  +M
Sbjct: 464 TYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEM 523

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           +A     ++ TY+TLID   K G +  A  + +E    G+K  +  Y+ L++  C +G V
Sbjct: 524 EAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRV 583

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           E    LL+ M ++ +RPNVVTYNS++  +
Sbjct: 584 EGGKKLLEWMLEKNVRPNVVTYNSLMKQY 612



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 179/347 (51%), Gaps = 5/347 (1%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+++ A  + +    +G  +    ++++I+     G   +A+ V   M  + +  + V +
Sbjct: 301 GELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVF 360

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNE 324
             VI   C KG  D      +F++M + G+  DR+T  +L+  +C  G L EA R +  E
Sbjct: 361 TTVISGFCSKG--DLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADR-VLQE 417

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           MV +G+D D+ TY  L+D  CK   M  AF +  EM  + ++PNVVTY+ + DG  K G 
Sbjct: 418 MVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGD 477

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +  A  +  EM   G+ L+  +YN++++   K G  E+A+ +  EME++G R D  TY  
Sbjct: 478 VRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTT 537

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+    K G++D    M ++M    + P++ TY+ L++ +   G  +   ++     +  
Sbjct: 538 LIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKN 597

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           ++ +VV Y++L+   C +  ++S   +   M  + + PN  TYN +I
Sbjct: 598 VRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILI 644



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 232/473 (49%), Gaps = 44/473 (9%)

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           ++L RL  +D A  +F    ++   +      AL+SA    G  ++A   F+ M      
Sbjct: 233 AVLSRL-PLDEAIALFRELPDKNVCSHNILLKALLSA----GRLKDACQHFDEMSS---P 284

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV-CSRGGLWEAA 318
           P++VTY  ++   C +G  + ++ V++ D+M   G++ +   + S++A+ C++G + +A 
Sbjct: 285 PDVVTYGTMVHGYCVRG--ELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDAL 342

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           R +  +M   G+  D   + T++   C    +  A  +  EM  + ++ + VT++ +I+G
Sbjct: 343 R-VLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALING 401

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             +AG L +A  +  EM   G+ +D V+Y  ++  Y K G   EA  V  EM    +  +
Sbjct: 402 LCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPN 461

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VTY AL  G  KQG       +  +M    +  N+ TY++LI+   K G  ++AM+I  
Sbjct: 462 VVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMT 521

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E + AG + DV  Y+ LID LCK+G  + A ++L EM  +GI+P++ TYN +++ F  S 
Sbjct: 522 EMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSG 581

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
             E          G +K    L+ M    +K+V+    T N ++K   Q   +K  +   
Sbjct: 582 RVE----------GGKKL---LEWML---EKNVRPNVVTYNSLMK---QYCIDKNMKSTT 622

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           E            +++ MH  ++ PN  T++ ++    +  + ++A    +E+
Sbjct: 623 E------------IYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEM 663



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 190/396 (47%), Gaps = 15/396 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMI---SILGRLGKVDLA--K 213
           YT ++  L N+G+ S A++         E     G    A++    I G   K DLA  +
Sbjct: 325 YTSVIALLCNKGQVSDALRVL-------EDMTMHGVALDAVVFTTVISGFCSKGDLAAAR 377

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
            +FE     G        +ALI+   R+G  +EA  V   M    L  ++VTY  +ID  
Sbjct: 378 RLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGY 437

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
            K G +      + ++M+   V P+ +T+ +L     + G   AA  L +EM ++G++ +
Sbjct: 438 CKRG-NMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELN 496

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++TYN+L++ +CK   ++ A  IM EM A     +V TY+T+ID   K+G  D A NM  
Sbjct: 497 VYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQ 556

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           EM   GI     +YN +++ +   GR E    + + M    +R + VTYN+L+  Y    
Sbjct: 557 EMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDK 616

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
                  +++ M +  V+PN  TY+ LI  + K    KEA+   +E  + GL+     YS
Sbjct: 617 NMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYS 676

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGI--RPNVVTY 547
           ALI  L K      A    D+M  EG+   P+V ++
Sbjct: 677 ALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF 712



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 225/502 (44%), Gaps = 69/502 (13%)

Query: 176 IQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALI 235
           +QCFA A     R+    +      +IL R  +       F     E +  T  AFS+  
Sbjct: 151 LQCFAIAAHLAVREPGTAR------AILVRALRFPSPHRHFV----EQFIFTYKAFSSDP 200

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV 295
           +++     C  +  +   +++Y L P+  + NAV+       +     + +F ++    V
Sbjct: 201 ASFDLLLLCLPSAELLRRLRQYGLSPSPESCNAVLSR-----LPLDEAIALFRELPDKNV 255

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
               I   +LL   S G L +A ++ F+EM       D+ TY T++   C   +++ A +
Sbjct: 256 CSHNILLKALL---SAGRLKDACQH-FDEM---SSPPDVVTYGTMVHGYCVRGELENAVK 308

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++ EM AK +  N   Y+++I      G++ DAL +  +M   G+ LD V + TV+S + 
Sbjct: 309 LLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFC 368

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
             G    A  + +EM+  G+  D VT+ AL+ G  + G+  E  R+ ++M    +  +++
Sbjct: 369 SKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVV 428

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY+ LID Y K G   EA ++  E     +  +VV Y+AL D LCK G V +A  LL EM
Sbjct: 429 TYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEM 488

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
             +G+  NV TYNS+I+         C   ++E+ +    E              ++ AG
Sbjct: 489 CNKGLELNVYTYNSLINGL-------CKFGNLEQAMRIMTE--------------MEAAG 527

Query: 596 -RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL-------KIKPNVVT 647
            RTD   +  +  L+               + LC  G F + H +        IKP++ T
Sbjct: 528 HRTD---VYTYTTLI---------------DTLCKSGEFDRAHNMLQEMLDKGIKPSIAT 569

Query: 648 FSAILNACSRCNSFEDASMLLE 669
           ++ ++N        E    LLE
Sbjct: 570 YNVLMNGFCMSGRVEGGKKLLE 591



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 171/342 (50%), Gaps = 3/342 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+ L R G++  A  + +  +++G    V  ++ LI  Y + G   EA  V N M  
Sbjct: 396 TALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVG 455

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             + PN+VTY A+ D   K G D +   E+  +M   G++ +  T+NSL+  +C  G L 
Sbjct: 456 RRVAPNVVTYTALSDGLCKQG-DVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLE 514

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +A R +  EM   G   D++TY TL+D +CK  + D A  ++ EM  K I P++ TY+ +
Sbjct: 515 QAMR-IMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVL 573

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ++G+  +GR++    +   M    +  + V+YN+++  Y      +    + K M S  +
Sbjct: 574 MNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEV 633

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +  TYN L+ G+ K     E     ++M    +     +YS LI + +K   + EA  
Sbjct: 634 APNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARV 693

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
            F + +  GL A+  +YS  +D       +ES ++L DE+ +
Sbjct: 694 FFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVE 735


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/328 (33%), Positives = 168/328 (51%), Gaps = 5/328 (1%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRY--NLKPNLVTYNAVIDACGKGGVDFKHVVE 285
           +   + ++    + G  Q+AI   +   R+     PN VTYN + DA  + G D     +
Sbjct: 203 IAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVG-DIGMACK 261

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE--MVHRGIDQDIFTYNTLLDA 343
           I   M + GV P+ IT N+++    R G   AA   F E   V      +  TY+TL  A
Sbjct: 262 IVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASA 321

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
                 +D+A E+  EM      P+ V Y TMI G  +AGRL DA    + MK  G  LD
Sbjct: 322 FLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLD 381

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +YN ++  + +  +  EA  + +EM+  G++ D  TYN LL G  K G +  V  +  
Sbjct: 382 AKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLG 441

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
            M  D   P+++T+ TL+  Y K G   EA++IFR   +A ++ + V+Y+ LID LCK+ 
Sbjct: 442 HMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSR 501

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSII 551
            V+ A+ L DEM ++ +  NV TYN+++
Sbjct: 502 EVDVAIKLFDEMREKNVPANVTTYNALL 529



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 174/405 (42%), Gaps = 30/405 (7%)

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           D +      PD   FNSLL    R G       LF  M    +  D+ TY  LL+ +CK 
Sbjct: 120 DSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKS 179

Query: 348 AQMDLAFEIMAEM--PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE-MKFL-GIGLD 403
             +  A +++  M  P  ++ P++   +T++DG  K GRL  A+    E M+ + G   +
Sbjct: 180 GHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPN 239

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V+YN +   + ++G    A  +   ME  G+  + +T N ++GG  + G+       F 
Sbjct: 240 AVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFR 299

Query: 464 QMKADCVSP----NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           + +   V P    N +TYSTL   +        AM++F E    G + D V+Y  +I  L
Sbjct: 300 EKRT--VWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGL 357

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKE- 576
            + G +  A +    M K G + +   YN +I  F R        + +E  + +G Q + 
Sbjct: 358 TQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDV 417

Query: 577 ---SANLDAMCSQDD---KDVQEAGRTDNQI---IKVFGQLVAEKAGQGKKENRCRQEIL 627
              +  L  +C   D    D       D+     +  FG LV      GK +   R    
Sbjct: 418 YTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALR---- 473

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
               +F+ M + +I+PN V ++ +++   +    + A  L +E+R
Sbjct: 474 ----IFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMR 514



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 187/425 (44%), Gaps = 30/425 (7%)

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EAA  L + +       DI  +N+LL A+ +   +    E+   M   ++ P+VVTY  +
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGIL 172

Query: 376 IDGYAKAGRLDDALNMFSEMKFLG--IGLDRVSYNTVLSIYAKLGRFEEALLVCKE--ME 431
           ++G  K+G + DAL +   M   G  +  D    NTV+    K+GR ++A++   E    
Sbjct: 173 LNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRH 232

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G   +AVTYN L   + + G      ++  +M+ + V+PN++T +T+I    + G   
Sbjct: 233 VHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVG 292

Query: 492 EAMQIFREFKQAGLKA--DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
            A++ FRE +    +A  + V YS L  A      V+ A+ L  EM   G RP+ V Y +
Sbjct: 293 AALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFT 352

Query: 550 IIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
           +I    ++      +D        +K    LDA       ++   G    + +    +L+
Sbjct: 353 MISGLTQAGR---LLDACTTAASMKKAGFKLDA----KAYNILIGGFCRKKKLHEAYELL 405

Query: 610 AEKAGQGKKENRCRQEI----LCILGVFQKMHKL-------KIKPNVVTFSAILNACSRC 658
            E  G G + +          LC  G F  + +L         +P+VVTF  +++   + 
Sbjct: 406 EEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKA 465

Query: 659 NSFEDASML---LEELRLFDNQV-YGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASA 714
              ++A  +   ++E R+  N V Y      L   R+     A+ LFDE++  +      
Sbjct: 466 GKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSRE--VDVAIKLFDEMREKNVPANVT 523

Query: 715 FYNAL 719
            YNAL
Sbjct: 524 TYNAL 528



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 3/186 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I    R  K+  A  + E     G    VY ++ L+S   ++G       +   M    
Sbjct: 388 LIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDG 447

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            +P++VT+  ++   C  G  D    + IF  M    +QP+ + +N+L+    +    + 
Sbjct: 448 CQPSVVTFGTLVHGYCKAGKTD--EALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDV 505

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  LF+EM  + +  ++ TYN LL  +      + AFE+M  M  +  +PN VT   +++
Sbjct: 506 AIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLME 565

Query: 378 GYAKAG 383
              + G
Sbjct: 566 WLPEIG 571


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 223/476 (46%), Gaps = 36/476 (7%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L   +I  L   G V  A  + +  L  G    V  F+ ++      G+ +EA  + + M
Sbjct: 217 LYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRM 276

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
             +   P++VTY  ++    +G    +   E +  ML    + + +  N+++  C   G 
Sbjct: 277 MMHGCTPSVVTYGFLL----RGLCRTRQADEAYA-MLGRVPEVNVVMLNTVIRGCLAEGK 331

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A  L+  M  +G   D+ TYN L+  +CK  +   A  ++ EM  K  +PN+VTYST
Sbjct: 332 LARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYST 391

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++  + + G  DDA  M  +M   G  ++   YN ++    K G+ +EA+ + +EM+S G
Sbjct: 392 LLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQG 451

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
            + D  TYN ++       + DE   +F  +  + V  N +TY+TLI      G ++E +
Sbjct: 452 CKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGL 511

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++  E    G   DVV Y+ LI ALCK G V+ ++ LL+EM  +GI+PN  +YN +I+  
Sbjct: 512 RLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINEL 571

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            ++              GK +++  L        K++   G T +  I  +  L+     
Sbjct: 572 CKA--------------GKVRDALEL-------SKEMLNQGLTPD--IVTYNTLINGLCK 608

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
            G             L + +K+    + P++VT++ +++   +    +DASMLL++
Sbjct: 609 VGWTH--------AALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDK 656



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 223/498 (44%), Gaps = 47/498 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A++S L R      A  ++   L +    T + F     A  R G  ++A+++   M R
Sbjct: 149 NAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGMAR 208

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL-LAVCSRGGL 314
           +   P+ V Y  VI A   +GGV       + D+ML  G   D  TFN + L +C  G +
Sbjct: 209 HGCVPDAVLYQTVIHALVAQGGV--AEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHV 266

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EAAR L + M+  G    + TY  LL  +C+  Q D A+ ++  +P  N    VV  +T
Sbjct: 267 REAAR-LVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVN----VVMLNT 321

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I G    G+L  A  ++  M   G   D  +YN ++    KLGR   A+ +  EME  G
Sbjct: 322 VIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKG 381

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              + VTY+ LL  + + G +D+ R M +QM A   S N   Y+ +I    K G   EAM
Sbjct: 382 CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAM 441

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++ +E K  G K D+  Y+ +I  LC N  ++ A  +   + +EG+  N +TYN++I A 
Sbjct: 442 RLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHAL 501

Query: 555 GRSATTE-------------CTVDDVERDLGKQKESANLDAMCSQDDKD--------VQE 593
             S   +             C +D V  +         + A+C + + D        +  
Sbjct: 502 LHSGRWQEGLRLANEMVLHGCPLDVVSYN-------GLIKALCKEGNVDRSMMLLEEMMT 554

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
            G   N     +  L+ E    GK  +         L + ++M    + P++VT++ ++N
Sbjct: 555 KGIKPNNF--SYNMLINELCKAGKVRD--------ALELSKEMLNQGLTPDIVTYNTLIN 604

Query: 654 ACSRCNSFEDASMLLEEL 671
              +      A  LLE+L
Sbjct: 605 GLCKVGWTHAALNLLEKL 622



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 176/350 (50%), Gaps = 1/350 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A  ++E   ++G    V+ ++ L+    + G C  A+ + + M+     PN+VTY
Sbjct: 330 GKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTY 389

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           + ++ +  + G+ +     + D M   G   +   +N ++    + G  + A  L  EM 
Sbjct: 390 STLLHSFCRNGM-WDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMK 448

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +G   DI TYNT++  +C   QMD A  I   +  + +  N +TY+T+I     +GR  
Sbjct: 449 SQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQ 508

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           + L + +EM   G  LD VSYN ++    K G  + ++++ +EM + GI+ +  +YN L+
Sbjct: 509 EGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLI 568

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
               K GK  +   + ++M    ++P+++TY+TLI+   K G    A+ +  +     + 
Sbjct: 569 NELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVH 628

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            D+V Y+ LI   CK  L++ A  LLD+    GI PN  T+  ++  F R
Sbjct: 629 PDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVR 678



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 200/488 (40%), Gaps = 44/488 (9%)

Query: 284 VEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           + + D M R   V P   ++N++L+  +R      A  L+  M+   +    FT+     
Sbjct: 129 LHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAAR 188

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A+C+  +   A  ++  M      P+ V Y T+I      G + +A  +  EM  +G   
Sbjct: 189 ALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAA 248

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D  ++N V+     LG   EA  +   M   G     VTY  LL G  +  + DE   M 
Sbjct: 249 DVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAML 308

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            ++       N++  +T+I      G    A +++      G   DV  Y+ L+  LCK 
Sbjct: 309 GRVP----EVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKL 364

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           G   SAV +LDEM ++G  PN+VTY++++ +F R+       DD           A LD 
Sbjct: 365 GRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMW----DDAR---------AMLDQ 411

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
           M +   K      +  N II   G+        GK +   R        + Q+M     K
Sbjct: 412 MSA---KGFSMNSQGYNGIIYALGK-------DGKLDEAMR--------LVQEMKSQGCK 453

Query: 643 PNVVTFSAILNACSRCNSFEDASM----LLEELRLFDNQVYG-VAHGLLMGYRDNIWVQA 697
           P++ T++ I+      +  ++A      LLEE  + +   Y  + H LL   R   W + 
Sbjct: 454 PDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGR---WQEG 510

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLH 757
           L L +E+ L         YN L   L   G    + +++ E   + +  N +S + L   
Sbjct: 511 LRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINE 570

Query: 758 LMSSGAAR 765
           L  +G  R
Sbjct: 571 LCKAGKVR 578



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 154/310 (49%), Gaps = 5/310 (1%)

Query: 145 ILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +L + E K C  +   Y+ LL      G W  A         +    N QG   + +I  
Sbjct: 373 MLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGY--NGIIYA 430

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           LG+ GK+D A  + +   ++G    +  ++ +I     +    EA  +F ++    +  N
Sbjct: 431 LGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVAN 490

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
            +TYN +I A    G  ++  + + ++M+ +G   D +++N L+    + G  + +  L 
Sbjct: 491 GITYNTLIHALLHSG-RWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLL 549

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            EM+ +GI  + F+YN L++ +CK  ++  A E+  EM  + ++P++VTY+T+I+G  K 
Sbjct: 550 EEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKV 609

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G    ALN+  ++    +  D V+YN ++S + K+   ++A ++  +  S GI  +  T+
Sbjct: 610 GWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTW 669

Query: 443 NALLGGYGKQ 452
             ++  + +Q
Sbjct: 670 GMMVQNFVRQ 679


>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1163

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 211/431 (48%), Gaps = 53/431 (12%)

Query: 173 SKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYA-- 230
           SKA+Q F +A +     NDQ      M+ ILGR   +++A+N   +      G       
Sbjct: 100 SKALQFFNWAPELGFTHNDQSYFL--MLEILGRARNLNVARNFLFSIKRRSNGTVKLEDR 157

Query: 231 -FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            F++LI +YG++G  QE++ VFNSMK   + P++VT+N+++    K G        +FD+
Sbjct: 158 FFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRT-NMAQSVFDE 216

Query: 290 MLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           ML   GV PD  TFN L+    +  + +     F EM     D D+ TYNTL+D +C+  
Sbjct: 217 MLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAG 276

Query: 349 QMDLAFEIMAEMPAK--NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
           ++++A  ++  M  K  N++P+VVTY+T++ GY     +D+AL +F EM   G+  + ++
Sbjct: 277 KVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEIT 336

Query: 407 YNTV------------------------------------LSIYAKLGRFEEALLVCKEM 430
           YNT+                                    ++ +   G   +AL V ++M
Sbjct: 337 YNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKM 396

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM-------KADCVSPNLLTYSTLIDV 483
               +R D+ TY+ L+    ++G ++   ++F+++       + D  +P +  Y ++ + 
Sbjct: 397 MVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEF 456

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             + G   +A ++FR+  + G + D + +  LI   C+ G  E+   LL  M +    P+
Sbjct: 457 LCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPD 515

Query: 544 VVTYNSIIDAF 554
           + TY S+ID  
Sbjct: 516 LETYQSLIDGL 526



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 115/234 (49%), Gaps = 14/234 (5%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+R    + E  +A+  F   V +  + N+     + +I  L  + K+D  K IFE 
Sbjct: 302 YTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEIT--YNTLIKGLCEVQKIDKIKQIFEG 359

Query: 219 ALNEG-YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI-DACGKG 276
           AL  G +       + L++A+  +G   +A+ VF  M   N++P+  TY+ +I + C +G
Sbjct: 360 ALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRG 419

Query: 277 GVDFKHVVEIFDDM------LRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
             +F+   ++FD++      LR+ G  P    + S+     R G    A  +F +++ RG
Sbjct: 420 --NFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRG 477

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
             QD  ++  L+   C+    +  +E++  M  ++  P++ TY ++IDG  + G
Sbjct: 478 T-QDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKG 530


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 192/371 (51%), Gaps = 6/371 (1%)

Query: 192 QGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF 251
           + KL + ++  L RLG++  A+N+F+   + G   TV +F+ +IS   R+G    A ++ 
Sbjct: 239 EAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLH 298

Query: 252 NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
             M    + P++ TY A+I    + G   +    +F+ M   G++P+ + F  L+    +
Sbjct: 299 RRMSEAGVTPDVYTYGALIQGLCRVG-RIEDARGVFEKMCGRGMKPNAVVFTILIDAHCK 357

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            G  E    L  EM  RG+  D  TYN +++ +C+   +  A  I+ EM +  + P+ VT
Sbjct: 358 KGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 417

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+T+IDGY K   LD A+ +   M   G+GLD V+Y  ++S  +K GR  +A  V  EM 
Sbjct: 418 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 477

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            +G+  D  TY  ++  + ++G      R+ ++M+     P ++TY+ +++ + K G  K
Sbjct: 478 EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMK 537

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM-TKEGIRPNVVTYNSI 550
            A  +       G+  D + Y+ L+D  CK+G     V+ ++E+ + +G  P++  Y SI
Sbjct: 538 NADMLLNAMINIGVSPDDITYNILLDGHCKHG----KVTDIEELKSAKGTVPDLGVYTSI 593

Query: 551 IDAFGRSATTE 561
           +    +  TT+
Sbjct: 594 VGEIVKKKTTK 604



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 164/309 (53%), Gaps = 1/309 (0%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           EA + +  +    L P    +N ++    + G +      +FD+M   GV+   ++FN++
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLG-ELASAQNVFDEMQSRGVRRTVVSFNTM 281

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           ++   R G  + A  L   M   G+  D++TY  L+  +C+  +++ A  +  +M  + +
Sbjct: 282 ISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGM 341

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            PN V ++ +ID + K G  +  L +  EM+  G+  D V+YN +++   +    + A  
Sbjct: 342 KPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASG 401

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           +  EM S+G+R D VTY  L+ GY K+ + D    + + M A+ V  + +TY+ LI   S
Sbjct: 402 IVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLS 461

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G   +A ++  E  +AGL+ D   Y+ +IDA C+ G V++ + LL EM  +G +P VV
Sbjct: 462 KAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVV 521

Query: 546 TYNSIIDAF 554
           TYN I++ F
Sbjct: 522 TYNVIMNGF 530



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 170/334 (50%), Gaps = 1/334 (0%)

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
           L+ G       F+ L+    R G    A +VF+ M+   ++  +V++N +I    + G D
Sbjct: 232 LDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG-D 290

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
                 +   M   GV PD  T+ +L+    R G  E AR +F +M  RG+  +   +  
Sbjct: 291 LDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTI 350

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+DA CK    +   E+  EM  + + P+ VTY+ +++G  +A  L  A  +  EM+  G
Sbjct: 351 LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 410

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           +  D V+Y T++  Y K    + A+ + + M + G+  D VTY AL+ G  K G+  +  
Sbjct: 411 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAE 470

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           R+  +M    + P+  TY+ +ID + + G  K  +++ +E +  G K  VV Y+ +++  
Sbjct: 471 RVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGF 530

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           CK G +++A  LL+ M   G+ P+ +TYN ++D 
Sbjct: 531 CKLGQMKNADMLLNAMINIGVSPDDITYNILLDG 564



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 184/383 (48%), Gaps = 35/383 (9%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           +L  G+ P+   FN L+    R G   +A+N+F+EM  RG+ + + ++NT++  +C+   
Sbjct: 231 LLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGD 290

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A  +   M    ++P+V TY  +I G  + GR++DA  +F +M   G+  + V +  
Sbjct: 291 LDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTI 350

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++  + K G  E  L + +EM   G+R DAVTYNA++ G  +         +  +M++  
Sbjct: 351 LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 410

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + P+ +TY+TLID Y K      AM+I +     G+  D V Y+ALI  L K G    A 
Sbjct: 411 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAE 470

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            +L EM + G+ P+  TY  +IDAF       C   DV+  L   KE  N         K
Sbjct: 471 RVLGEMMEAGLEPDNTTYTMVIDAF-------CRKGDVKTGLRLLKEMQN---------K 514

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
             +    T N I+  F +L     GQ K  +           +   M  + + P+ +T++
Sbjct: 515 GRKPGVVTYNVIMNGFCKL-----GQMKNADM----------LLNAMINIGVSPDDITYN 559

Query: 650 AILNACSRCNSFEDASMLLEELR 672
            +L+   +     D    +EEL+
Sbjct: 560 ILLDGHCKHGKVTD----IEELK 578



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 75/297 (25%)

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK---EMESSGI 435
           YA+ G L DA  +       GI L+  S   ++S      RF  A   C    ++  +G+
Sbjct: 183 YAEEGLLPDACTLVLLALRRGIRLEPTSCTGLMS------RFPTAPEACAFYLQLLDAGL 236

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +A  +N L+    + G+    + +F++M++  V   +++++T+I    + G    A  
Sbjct: 237 PPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAET 296

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           + R   +AG+  DV  Y ALI  LC+ G +E A  + ++M   G++PN V +  +I    
Sbjct: 297 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILI---- 352

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
                                    DA C + D +                         
Sbjct: 353 -------------------------DAHCKKGDAET------------------------ 363

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                        +L + ++M +  ++P+ VT++AI+N   R    + AS ++ E+R
Sbjct: 364 -------------MLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 407


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 228/507 (44%), Gaps = 87/507 (17%)

Query: 118 STRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSKA 175
           S  H++    A+    AF R  V+ G +           D++T+  L+    + G+W +A
Sbjct: 261 SVVHALCKARAMDKAEAFLRQMVNKGVL----------PDNWTYNNLIYGYSSTGQWKEA 310

Query: 176 IQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETA---------------- 219
           ++ F   ++R+    D   L + M S L + GK+  A+++F+T                 
Sbjct: 311 VRVFK-EMRRQSILPDVVALNTLMGS-LCKYGKIKEARDVFDTMAMKGQNPDVFSYTIML 368

Query: 220 -------------------LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
                              L +G    +  F+ LI AY   G   +A+ +FN M+ + +K
Sbjct: 369 NGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 428

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA- 317
           P++VTY  VI A C  G +D    +E F+ M+  GV PD+  ++ L+   C+ G L +A 
Sbjct: 429 PHVVTYMTVIAALCRIGKMD--DAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAK 486

Query: 318 ---------------------------------ARNLFNEMVHRGIDQDIFTYNTLLDAI 344
                                            A+N+F+  V+ G+  D   YN L+D  
Sbjct: 487 ELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGY 546

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C   +M+ A  +   M +  I PNVV Y T+++GY K GR+D+ L++F EM   GI    
Sbjct: 547 CLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPST 606

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           + YN ++    + GR   A +   EM  SGI  +  TY+ +L G  K   +DE   +F++
Sbjct: 607 ILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE 666

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           ++A  V  +++T +T+I    +    +EA  +F    ++GL    V YS +I  L K GL
Sbjct: 667 LRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGL 726

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSII 551
           VE A  +   M   G  P+    N ++
Sbjct: 727 VEEAEDMFSSMQNAGCEPDSRLLNHVV 753



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 233/489 (47%), Gaps = 46/489 (9%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V A++ +I  + + G   +A  +F  M +  + P+LVTY++V+ A C    +D       
Sbjct: 221 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEA--F 278

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M+  GV PD  T+N+L+   S  G W+ A  +F EM  + I  D+   NTL+ ++CK
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A ++   M  K  +P+V +Y+ M++GYA  G L D  ++F  M   GI     +
Sbjct: 339 YGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICT 398

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +N ++  YA  G  ++A+++  EM   G++   VTY  ++    + GK D+    F QM 
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V P+   Y  LI  +   G   +A ++  E    G++ D+V + ++I+ LCK G V 
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVM 518

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A ++ D     G+ P+ V YN ++D +       C V  +E+ L         DAM S 
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGY-------CLVGKMEKAL------RVFDAMVS- 564

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
                  AG   N +   +G LV      G+ +          L +F++M +  IKP+ +
Sbjct: 565 -------AGIEPNVV--GYGTLVNGYCKIGRIDEG--------LSLFREMLQKGIKPSTI 607

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG------LLMG-YRDNIWVQALS 699
            ++ I++       FE    +  +++  +    G+A        +L G +++  + +A+ 
Sbjct: 608 LYNIIIDGL-----FEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 662

Query: 700 LFDEVKLMD 708
           LF E++ M+
Sbjct: 663 LFKELRAMN 671



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 192/389 (49%), Gaps = 34/389 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S+++  L +   +D A+      +N+G     + ++ LI  Y  +G  +EA+ VF  M+R
Sbjct: 260 SSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 319

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVD------------------FKHVV------------- 284
            ++ P++V  N ++ + C  G +                   F + +             
Sbjct: 320 QSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVD 379

Query: 285 --EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             ++FD ML +G+ P   TFN L+   +  G+ + A  +FNEM   G+   + TY T++ 
Sbjct: 380 MTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIA 439

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A+C+  +MD A E   +M  + + P+   Y  +I G+   G L  A  + SE+   G+ L
Sbjct: 440 ALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRL 499

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D V + ++++   KLGR  +A  +     + G+  DAV YN L+ GY   GK ++  R+F
Sbjct: 500 DIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF 559

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           + M +  + PN++ Y TL++ Y K G   E + +FRE  Q G+K   +LY+ +ID L + 
Sbjct: 560 DAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 619

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           G    A     EMT+ GI  N  TY+ ++
Sbjct: 620 GRTVPAKVKFHEMTESGIAMNKCTYSIVL 648



 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 243/522 (46%), Gaps = 62/522 (11%)

Query: 233 ALISAYGRSGYCQ-----EAISVF-NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           A+I+++   G+C+     EA+ +  +        P++ +YN ++ +    G   +     
Sbjct: 148 AIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQA---- 203

Query: 287 FDDMLRNGVQ------PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
            DD+LR   +      PD + +N+++    + G    A +LF EMV RGI  D+ TY+++
Sbjct: 204 -DDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSV 262

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           + A+CK   MD A   + +M  K + P+  TY+ +I GY+  G+  +A+ +F EM+   I
Sbjct: 263 VHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSI 322

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D V+ NT++    K G+ +EA  V   M   G   D  +Y  +L GY  +G   ++  
Sbjct: 323 LPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTD 382

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F+ M  D ++P + T++ LI  Y+  G+  +AM IF E +  G+K  VV Y  +I ALC
Sbjct: 383 LFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALC 442

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           + G ++ A+   ++M  +G+ P+   Y+ +I  F       CT       L K KE  + 
Sbjct: 443 RIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF-------CT----HGSLLKAKELIS- 490

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
                   + +    R D   I  FG ++      G+        ++    +F     + 
Sbjct: 491 --------EIMNNGMRLD---IVFFGSIINNLCKLGR--------VMDAQNIFDLTVNVG 531

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG------VAHGLLM-GY-RDN 692
           + P+ V ++ +++        E A      LR+FD  V        V +G L+ GY +  
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKA------LRVFDAMVSAGIEPNVVGYGTLVNGYCKIG 585

Query: 693 IWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
              + LSLF E+       ++  YN + D L+  G+   A++
Sbjct: 586 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 189/401 (47%), Gaps = 3/401 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +  L++   N G   KA+    F   R+            +I+ L R+GK+D A   F  
Sbjct: 399 FNVLIKAYANCGMLDKAM--IIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQ 456

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +++G     YA+  LI  +   G   +A  + + +    ++ ++V + ++I+   K G 
Sbjct: 457 MIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLG- 515

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                  IFD  +  G+ PD + +N L+      G  E A  +F+ MV  GI+ ++  Y 
Sbjct: 516 RVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG 575

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL++  CK  ++D    +  EM  K I P+ + Y+ +IDG  +AGR   A   F EM   
Sbjct: 576 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 635

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI +++ +Y+ VL    K   F+EA+ + KE+ +  ++ D +T N ++ G  +  + +E 
Sbjct: 636 GIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 695

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
           + +F  +    + P  +TYS +I    K GL +EA  +F   + AG + D  L + ++  
Sbjct: 696 KDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRE 755

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
           L K   +  A + L ++ +       +T   ++D F    T
Sbjct: 756 LLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGT 796


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 242/531 (45%), Gaps = 78/531 (14%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K+  A + F      G+  TV  FS L+          EA+ +F+ M     KPN+VT+ 
Sbjct: 128 KLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFT 183

Query: 268 AVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG------------- 312
            +++  C +G V     V + D ML +G+QP++IT+ +++  +C  G             
Sbjct: 184 TLMNGLCREGRV--VEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 241

Query: 313 ---------------------------GLWEAARNLFNEMVHRG-IDQDIFTYNTLLDAI 344
                                      G W  A+ L  EM+ R  I  D+ TYN L++A 
Sbjct: 242 EVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAF 301

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
            K  +   A E+  EM  + I P+ +TYS+MIDG+ K  RLD A +MF  M   G   D 
Sbjct: 302 VKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDI 361

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           +++NT+++ Y +  R ++ + +  EM  +G+  + +TY  L+ G+ + G  +  + + ++
Sbjct: 362 ITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQE 421

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA-----------GLKADVVLYS 513
           M +  V PN++T +TL+D     G  K+A+++F+  +++           G++ DV  Y+
Sbjct: 422 MVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYN 481

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            LI  L   G    A  L +EM   GI P+ +TYNS+I    + +  +     +   +G 
Sbjct: 482 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLD-EATQMFDSMGS 540

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN-----------RC 622
           +  S N+    +  +   + AGR D+ +     +L  E   +G   N           R 
Sbjct: 541 KSFSPNVVTFTTLINGYCK-AGRVDDGL-----ELFCEMGRRGIVANAITYITLIHGFRK 594

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
              I   L +FQ+M    + P+ +T   +L         + A  +LE+L++
Sbjct: 595 VGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQM 645



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 128/501 (25%), Positives = 234/501 (46%), Gaps = 39/501 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++ ++ R+G++D+  ++             Y+F+ L+  +        A+S F  + +  
Sbjct: 84  LMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLG 143

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
             P +VT++ ++      G+  +  +    D+     +P+ +TF +L+  +C  G + EA
Sbjct: 144 FHPTVVTFSTLLH-----GLCVEDRISEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEA 198

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-PAKNISPNVVTY---- 372
              L + M+  G+  +  TY T++D +CK      A  ++ +M    +I PNVV +    
Sbjct: 199 V-ALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLER 257

Query: 373 -STMIDGYAKAGRLDDALNMFSEM-KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
            + MI+G+  +GR  +A  +  EM +   I  D V+YN +++ + K G+F EA  +  EM
Sbjct: 258 RTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEM 317

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
              GI    +TY++++ G+ KQ + D    MF  M     SP+++T++TLI  Y +    
Sbjct: 318 LPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRV 377

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            + +++  E  +AGL A+ + Y+ LI   C+ G + +A  LL EM   G+ PNVVT N++
Sbjct: 378 DDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTL 437

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF----- 605
           +D    +   +   D +E     QK   ++DA  S     V+   +T N +I        
Sbjct: 438 LDGLCDNGKLK---DALEMFKAMQKSKMDIDA--SHPFNGVEPDVQTYNILISGLINEGK 492

Query: 606 ----GQLVAEKAGQGKKENR----------CRQEILC-ILGVFQKMHKLKIKPNVVTFSA 650
                +L  E   +G   +           C+Q  L     +F  M      PNVVTF+ 
Sbjct: 493 FLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 552

Query: 651 ILNACSRCNSFEDASMLLEEL 671
           ++N   +    +D   L  E+
Sbjct: 553 LINGYCKAGRVDDGLELFCEM 573



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 154/316 (48%), Gaps = 47/316 (14%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS--------------- 241
           S+MI    +  ++D A+++F     +G    +  F+ LI+ Y R+               
Sbjct: 330 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 389

Query: 242 ---------------GYCQ-----EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
                          G+CQ      A  +   M    + PN+VT N ++D     G   K
Sbjct: 390 AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNG-KLK 448

Query: 282 HVVEIFDDMLR-----------NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
             +E+F  M +           NGV+PD  T+N L++     G +  A  L+ EM HRGI
Sbjct: 449 DALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 508

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             D  TYN+++  +CK +++D A ++   M +K+ SPNVVT++T+I+GY KAGR+DD L 
Sbjct: 509 VPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 568

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +F EM   GI  + ++Y T++  + K+G    AL + +EM +SG+  D +T   +L G  
Sbjct: 569 LFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLW 628

Query: 451 KQGKYDEVRRMFEQMK 466
            + +      M E ++
Sbjct: 629 SKEELKRAVAMLEDLQ 644



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 142/280 (50%), Gaps = 11/280 (3%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           +++F DM+R+   P  I F  L+ V  R G  +   +L  +M  R +  + +++  L+  
Sbjct: 63  IDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKC 122

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C  +++  A     ++      P VVT+ST++ G     R+ +AL++F +M       +
Sbjct: 123 FCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPN 178

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V++ T+++   + GR  EA+ +   M   G++ + +TY  ++ G  K G       +  
Sbjct: 179 VVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 238

Query: 464 QM-KADCVSPNLLTY-----STLIDVYSKGGLYKEAMQIFRE-FKQAGLKADVVLYSALI 516
           +M +   + PN++ +     + +I+ +   G + EA Q+ +E  ++  +  DVV Y+ALI
Sbjct: 239 KMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALI 298

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           +A  K G    A  L DEM   GI P+ +TY+S+ID F +
Sbjct: 299 NAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCK 338



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/375 (22%), Positives = 175/375 (46%), Gaps = 31/375 (8%)

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A +LF +MV       +  +  L+  + +  ++D+   +  +M  + +  N  +++ +
Sbjct: 60  EDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTIL 119

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +  +    +L  AL+ F ++  LG     V+++T+L       R  EAL +  +M     
Sbjct: 120 MKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----C 175

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + VT+  L+ G  ++G+  E   + ++M  D + PN +TY T++D   K G    A+ 
Sbjct: 176 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 235

Query: 496 IFREFKQAG-LKADVVLY-----SALIDALCKNGLVESAVSLLDEM-TKEGIRPNVVTYN 548
           + R+ ++   +K +VV++     + +I+  C +G    A  LL EM  ++ I P+VVTYN
Sbjct: 236 LLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYN 295

Query: 549 SIIDAF---GRSATTECTVDD-VERDL--GKQKESANLDAMCSQDDKDVQE------AGR 596
           ++I+AF   G+    E   D+ + R +       S+ +D  C Q+  D  E      A +
Sbjct: 296 ALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATK 355

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
             +  I  F  L+A      + ++  +        +  +M +  +  N +T++ +++   
Sbjct: 356 GCSPDIITFNTLIAGYCRAKRVDDGIK--------LLHEMTEAGLVANTITYTTLIHGFC 407

Query: 657 RCNSFEDASMLLEEL 671
           +      A  LL+E+
Sbjct: 408 QVGDLNAAQDLLQEM 422



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 138/294 (46%), Gaps = 28/294 (9%)

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+ +   L+DA+++F +M         + +  ++ +  ++GR +  + + ++ME   +  
Sbjct: 52  GFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPC 111

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +A ++  L+  +    K       F ++      P ++T+STL+          EA+ +F
Sbjct: 112 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF 171

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            +      K +VV ++ L++ LC+ G V  AV+LLD M ++G++PN +TY +I+D   + 
Sbjct: 172 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 227

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
             T   ++     L K +E +++          V         +I  F       +G+  
Sbjct: 228 GDTVSALN----LLRKMEEVSHIKP------NVVIWPLERRTCMINGFCS-----SGRWS 272

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +  +  QE+L          + KI P+VVT++A++NA  +   F +A  L +E+
Sbjct: 273 EAQQLLQEML---------ERKKISPDVVTYNALINAFVKEGKFFEAEELYDEM 317


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 184/329 (55%), Gaps = 2/329 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE- 285
           V +F+ +++   + G    A  V   MK + + PN++TYN +ID  C  G +   +  + 
Sbjct: 155 VISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADA 214

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           I  +M+  G+ P+ +T+N L+    +      A  +F EM  +G+  ++ TYN L++ +C
Sbjct: 215 ILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLC 274

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
              ++D A  +  +M + ++ PNVVT++ +I+G+ K   +++A+N+F++M+  G+  + +
Sbjct: 275 SDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAM 334

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y T++  Y K GR E+A  +   M   GI  +  TYN L+ G  ++G     R +  +M
Sbjct: 335 TYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEM 394

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
            +  +S +++TY+ LID   K G  ++A+++  E  + GL    V Y+ L+D  C+ G +
Sbjct: 395 VSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNL 454

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +A+ +   M ++G + NVVT+N +I  F
Sbjct: 455 RAALIVRTRMERKGKQANVVTHNVLIKGF 483



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 193/352 (54%), Gaps = 6/352 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY---GRSGYCQEAISVFNSMKRYNL 259
           L ++GK++ A ++ E     G    V  ++ LI  Y   GR G   +A ++   M    +
Sbjct: 165 LCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGI 224

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAA 318
            PN VTYN +ID   K   +    + +F +M R G++P+ +T+N L+  +CS G + EA 
Sbjct: 225 CPNEVTYNILIDGFCKDE-NVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAV 283

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L ++MV   ++ ++ T+N L++  CK   ++ A  +  +M  + + PN +TY+T+ID 
Sbjct: 284 A-LRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDA 342

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y K GR++DA  +++ M   GI  +  +YN +++   + G  + A  +  EM S  +  D
Sbjct: 343 YCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSAD 402

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VTYN L+    K+G+  +  ++ ++M    ++P+ +TY+TL+D Y + G  + A+ +  
Sbjct: 403 VVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRT 462

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             ++ G +A+VV ++ LI   C  G +E A  LL+EM + G+ PN  TY  I
Sbjct: 463 RMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII 514



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 184/346 (53%), Gaps = 4/346 (1%)

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
           F+ A + G+  ++ + + L+S   +     +   V+  M +  ++ N++++N V++   K
Sbjct: 108 FKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCK 167

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG--GLWEAARNLFNEMVHRGIDQ 332
            G       ++ +DM   GV P+ IT+N+L+   C  G  G    A  +  EMV +GI  
Sbjct: 168 VG-KLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICP 226

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           +  TYN L+D  CK   +  A  +  EM  + + PNVVTY+ +I+G    G++D+A+ + 
Sbjct: 227 NEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALR 286

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            +M    +  + V++N +++ + K     EA+ +  +ME  G+  +A+TY  L+  Y K 
Sbjct: 287 DQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKD 346

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G+ ++   ++  M    + P + TY+ LI    + G  K A  +  E     L ADVV Y
Sbjct: 347 GRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTY 406

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           + LID+LCK G    AV LLDEM ++G+ P+ VTYN+++D + R  
Sbjct: 407 NILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREG 452



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 223/454 (49%), Gaps = 46/454 (10%)

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK----GGVDFK 281
           N++ A   L+ A+ R+         F     Y  K +L++ N ++    K    G ++F 
Sbjct: 84  NSILA-DMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEF- 141

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
               ++ +M++  ++ + I+FN ++    + G    A ++  +M   G+  ++ TYNTL+
Sbjct: 142 ----VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLI 197

Query: 342 DAICKGAQMDLAFE---IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           D  CK  ++   ++   I+ EM AK I PN VTY+ +IDG+ K   +  A+ +F EM+  
Sbjct: 198 DGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQ 257

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  + V+YN +++     G+ +EA+ +  +M SS +  + VT+N L+ G+ K    +E 
Sbjct: 258 GLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEA 317

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +F  M+   V PN +TY+TLID Y K G  ++A  ++      G+  +V  Y+ LI  
Sbjct: 318 INLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAG 377

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
           LC+ G V++A SL++EM  + +  +VVTYN +ID+  +   +             +K   
Sbjct: 378 LCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGES-------------RKAVK 424

Query: 579 NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMH 637
            LD M    +K +  +  T N ++                +  CR+  +   L V  +M 
Sbjct: 425 LLDEMF---EKGLNPSHVTYNTLM----------------DGYCREGNLRAALIVRTRME 465

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +   + NVVT + ++         EDA+ LL E+
Sbjct: 466 RKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEM 499



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/432 (24%), Positives = 195/432 (45%), Gaps = 41/432 (9%)

Query: 333 DIFTYNTLLD-----AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           D F  N++L      A  +  ++   FE            ++++ + ++ G  K     D
Sbjct: 79  DSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGD 138

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
              ++ EM    I L+ +S+N V++   K+G+   A  V ++M+  G+  + +TYN L+ 
Sbjct: 139 MEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLID 198

Query: 448 GYGKQGKYDEVRR---MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           GY K G+  ++ +   + ++M A  + PN +TY+ LID + K      AM++F E ++ G
Sbjct: 199 GYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQG 258

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           L+ +VV Y+ LI+ LC +G V+ AV+L D+M    + PNVVT+N +I+ F ++ T     
Sbjct: 259 LRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVN--- 315

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                      E+ NL         D+++ G   N +   +  L+      G+ E+    
Sbjct: 316 -----------EAINLF-------NDMEKQGVDPNAM--TYTTLIDAYCKDGRMEDA--- 352

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG 684
                  ++  M    I P V T++ ++    R    + A  L+ E+         V + 
Sbjct: 353 -----FALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYN 407

Query: 685 LLMGY--RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
           +L+    +     +A+ L DE+     + +   YN L D     G  R A +V    +R+
Sbjct: 408 ILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERK 467

Query: 743 QVWENVWSESCL 754
               NV + + L
Sbjct: 468 GKQANVVTHNVL 479



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 96/192 (50%), Gaps = 3/192 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    + G+++ A  ++   ++ G    V  ++ LI+   R G  + A S+ N M  
Sbjct: 337 TTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVS 396

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             L  ++VTYN +ID+ C KG  + +  V++ D+M   G+ P  +T+N+L+    R G  
Sbjct: 397 KKLSADVVTYNILIDSLCKKG--ESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNL 454

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            AA  +   M  +G   ++ T+N L+   C   +++ A  ++ EM  + + PN  TY  +
Sbjct: 455 RAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII 514

Query: 376 IDGYAKAGRLDD 387
            +   + G + D
Sbjct: 515 KEEMMEKGFVPD 526


>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 564

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 190/363 (52%), Gaps = 3/363 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            +I++  +LGKV  A  + +   + G  + +  +S LI+ + +      A ++F  + + 
Sbjct: 93  CLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKD 152

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            +KP++V YN +I A CG G +D    V    +M +   +P   TF  ++   +R G  +
Sbjct: 153 GIKPDVVLYNNIITAFCGMGKMD--RAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMK 210

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A ++F+ M   G    + TYN L+  + +  +M+ A +I+ EM    +SPN  TY+T++
Sbjct: 211 KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIM 270

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            GYA  G    A   F++++  G+ LD  +Y  +L    K GR + AL V KEM +  I 
Sbjct: 271 HGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIP 330

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
           ++   YN L+ G+ ++G   E   + +QMK + V P++ TY++ I+  SK G  + A + 
Sbjct: 331 RNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKT 390

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             E K  G+K +V  Y+ LI+   +  L E A+S  +EM   G++P+   Y+ ++ +   
Sbjct: 391 IEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLS 450

Query: 557 SAT 559
            AT
Sbjct: 451 RAT 453



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 179/357 (50%), Gaps = 3/357 (0%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           +G  D    +FE     G   +V  +  LI+ Y + G   +A+ V   M+   +K N+ T
Sbjct: 66  VGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKT 125

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNE 324
           Y+ +I+   K   D+ +   IF+D++++G++PD + +N+++ A C  G + + A     E
Sbjct: 126 YSMLINGFLKLK-DWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKM-DRAVCTVKE 183

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M  +       T+  ++    +  +M  A ++   M      P V TY+ +I G  +  +
Sbjct: 184 MQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRK 243

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           ++ A  +  EM   G+  +  +Y T++  YA LG   +A     ++   G++ D  TY A
Sbjct: 244 MEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEA 303

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           LL    K G+      + ++M A  +  N   Y+ LID +++ G   EA  + ++ K+ G
Sbjct: 304 LLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREG 363

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           ++ D+  Y++ I+A  K G ++ A   ++EM   G++PNV TY ++I+ + R++  E
Sbjct: 364 VQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPE 420



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 169/361 (46%), Gaps = 1/361 (0%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           +D A+ +      EG    +  +  ++  Y   G   + + VF   K   L P+++TY  
Sbjct: 34  MDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGC 93

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           +I+   K G      +E+  +M   G++ +  T++ L+    +   W  A  +F +++  
Sbjct: 94  LINLYAKLG-KVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKD 152

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           GI  D+  YN ++ A C   +MD A   + EM  +   P   T+  +I G+A+ G +  A
Sbjct: 153 GIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKA 212

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           L++F  M+  G      +YN ++    +  + E+A  +  EM  +G+  +  TY  ++ G
Sbjct: 213 LDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHG 272

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           Y   G   +    F +++ + +  ++ TY  L+    K G  + A+ + +E     +  +
Sbjct: 273 YASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRN 332

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
             +Y+ LID   + G V  A  L+ +M +EG++P++ TY S I+A  ++   +     +E
Sbjct: 333 TFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIE 392

Query: 569 R 569
            
Sbjct: 393 E 393



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 204/460 (44%), Gaps = 65/460 (14%)

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +A + F E   +    +   Y  ++ A C+   MD A  ++ EM  + I   +  Y TM+
Sbjct: 1   SADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMM 60

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DGY   G  D  L +F   K  G+    ++Y  ++++YAKLG+  +AL V KEME +GI+
Sbjct: 61  DGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIK 120

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV------------- 483
            +  TY+ L+ G+ K   +     +FE +  D + P+++ Y+ +I               
Sbjct: 121 HNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCT 180

Query: 484 ----------------------YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
                                 +++ G  K+A+ +F   + +G    V  Y+ALI  L +
Sbjct: 181 VKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVE 240

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESAN 579
              +E A  +LDEMT  G+ PN  TY +I+  +     T          RD G Q +   
Sbjct: 241 KRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYT 300

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC-----------RQEILC 628
            +A+     K   ++GR  + +      +  E + Q    N             R ++  
Sbjct: 301 YEALL----KACCKSGRMQSAL-----AVTKEMSAQNIPRNTFIYNILIDGWARRGDVWE 351

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYGVAHG 684
              + Q+M +  ++P++ T+++ +NACS+    + A+  +EE++      + + Y     
Sbjct: 352 AADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTT--- 408

Query: 685 LLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
           L+ G+ R ++  +ALS F+E+KL       A Y+ L   L
Sbjct: 409 LINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSL 448


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 242/503 (48%), Gaps = 36/503 (7%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R   +D+A+ ++   +  G   TV  ++ ++ ++ + G  QEA+ +   M+     PN V
Sbjct: 179 RDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDV 238

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFN 323
           TYN +++     G + +   E+  DMLR G++    T++ L+   C +G + EA+R L  
Sbjct: 239 TYNVLVNGLSHSG-EMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASR-LGE 296

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EM+ RG    + TYNT++  +CK  ++  A +++  M  KN+ P++V+Y+T+I GY + G
Sbjct: 297 EMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLG 356

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            + +A  +F+E+++  +    V+YNT++    +LG  + A+ +  EM   G   D  T+ 
Sbjct: 357 NIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFT 416

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
             + G+ K G     + +F++M    + P+   Y T I    K G   +A  +  E    
Sbjct: 417 TFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLAR 476

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           G   D++ Y+  ID L K G ++ A  L+ +M   G+ P+ VTY SII A   +      
Sbjct: 477 GFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHL--- 533

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
                     +K  A    M S   K +  +       +  +  L+   A +G+ +    
Sbjct: 534 ----------RKARALFLEMLS---KGIFPS-------VVTYTVLIHSYAVRGRLK---- 569

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH 683
              L IL  F+ MH+  + PNV+T++A++N   +    + A     E++          +
Sbjct: 570 ---LAILHFFE-MHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTY 625

Query: 684 GLLMGYRDNI--WVQALSLFDEV 704
            +L+    N+  W +AL L+ ++
Sbjct: 626 TILINENCNLGHWQEALRLYKDM 648



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 184/360 (51%), Gaps = 1/360 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +++ L   G+++ AK + +  L  G   +VY +  LI  Y   G  +EA  +   M  
Sbjct: 241 NVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLS 300

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P +VTYN ++    K G       ++ D M+   + PD +++N+L+   +R G   
Sbjct: 301 RGAVPTVVTYNTIMYGLCKWG-RVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIG 359

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF E+ +R +   + TYNTL+D +C+   +D+A  +  EM      P+V T++T +
Sbjct: 360 EAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFV 419

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+ K G L  A  +F EM   G+  DR +Y T +    KLG   +A  + +EM + G  
Sbjct: 420 RGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFP 479

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D +TYN  + G  K G   E   + ++M  + + P+ +TY+++I  +   G  ++A  +
Sbjct: 480 PDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAL 539

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F E    G+   VV Y+ LI +    G ++ A+    EM ++G+ PNV+TYN++I+   +
Sbjct: 540 FLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCK 599



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 178/355 (50%), Gaps = 3/355 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + G+V  A+ + +  +N+     + +++ LI  Y R G   EA  +F  ++  +L P+
Sbjct: 317 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPS 376

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
           +VTYN +ID   + G D    + + D+M+++G  PD  TF + +   C  G L   A+ L
Sbjct: 377 VVTYNTLIDGLCRLG-DLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNL-PMAKEL 434

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F+EM++RG+  D F Y T +    K      AF +  EM A+   P+++TY+  IDG  K
Sbjct: 435 FDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHK 494

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G L +A  +  +M + G+  D V+Y +++  +   G   +A  +  EM S GI    VT
Sbjct: 495 LGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVT 554

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  L+  Y  +G+       F +M    V PN++TY+ LI+   K     +A   F E +
Sbjct: 555 YTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQ 614

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             G+  +   Y+ LI+  C  G  + A+ L  +M    I+P+  T+ S++    +
Sbjct: 615 AKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNK 669



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 220/470 (46%), Gaps = 58/470 (12%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G+  +  ++S ++    R+G  + A  V   +    ++      N VID      V    
Sbjct: 76  GFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKME------NGVIDVVSSSEVSMPS 129

Query: 283 VVEIFD--------------------DMLRNGVQPDRITFNSLLAVC-SRGGLWEAARNL 321
           V  I D                     M+  G+ PD    N +L +   R    + AR +
Sbjct: 130 VKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREV 189

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           +N MV  GI   + TYNT+LD+ CK   +  A +++ +M A   SPN VTY+ +++G + 
Sbjct: 190 YNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSH 249

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           +G ++ A  +  +M  LG+ +   +Y+ ++  Y + G+ EEA  + +EM S G     VT
Sbjct: 250 SGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVT 309

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN ++ G  K G+  + R++ + M    + P+L++Y+TLI  Y++ G   EA  +F E +
Sbjct: 310 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 369

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
              L   VV Y+ LID LC+ G ++ A+ L DEM K G  P+V T+ + +  F +     
Sbjct: 370 YRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMG--- 426

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
                   +L   KE    D M ++  +  + A      I ++ G+L   K G   K   
Sbjct: 427 --------NLPMAKEL--FDEMLNRGLQPDRFA-----YITRIVGEL---KLGDPSKA-- 466

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                    G+ ++M      P+++T++  ++   +  + ++AS L++++
Sbjct: 467 --------FGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKM 508



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 132/257 (51%), Gaps = 1/257 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++G + +AK +F+  LN G     +A+   I    + G   +A  +   M      P+L+
Sbjct: 424 KMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLI 483

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TYN  ID   K G + K   E+   ML NG+ PD +T+ S++      G    AR LF E
Sbjct: 484 TYNVFIDGLHKLG-NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLE 542

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+ +GI   + TY  L+ +     ++ LA     EM  K + PNV+TY+ +I+G  K  +
Sbjct: 543 MLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRK 602

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +D A N F+EM+  GI  ++ +Y  +++    LG ++EAL + K+M    I+ D+ T+ +
Sbjct: 603 MDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRS 662

Query: 445 LLGGYGKQGKYDEVRRM 461
           LL    K  K   VR +
Sbjct: 663 LLKHLNKDYKLHVVRHL 679



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 34/151 (22%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +  A+ +F   L++G   +V  ++ LI +Y   G  + AI  F  M    + PN++TY
Sbjct: 531 GHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 590

Query: 267 NAVIDA-CGKGGVD---------------------------------FKHVVEIFDDMLR 292
           NA+I+  C    +D                                 ++  + ++ DML 
Sbjct: 591 NALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 650

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
             +QPD  T  SLL   ++       R+L N
Sbjct: 651 REIQPDSCTHRSLLKHLNKDYKLHVVRHLEN 681


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 184/337 (54%), Gaps = 3/337 (0%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDF 280
            G  + +   S LI+ + + G+   + SVF+++ +   +P+ +T   +I   C KG  D 
Sbjct: 98  NGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKG--DI 155

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
              +   D +L  G Q +++++ +L+    + G  +AA  +   +  + +  D+  YNT+
Sbjct: 156 HKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTI 215

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +D +CK   ++ AF+  +EM AK I P VVTY+T+I G    G+L DA+ +  +M    I
Sbjct: 216 IDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENI 275

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
                +++ ++  + K G+ +EA  V   M    ++ + VTYN+L+ GY    + ++   
Sbjct: 276 NPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAES 335

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F  M    V+P++ +YS +I  + K  +  EAM++F E     +  DVV Y++LID LC
Sbjct: 336 IFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLC 395

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           K+G +  A+ L+ EM   G  PN++TYNS++DA  ++
Sbjct: 396 KSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKN 432



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 189/362 (52%), Gaps = 1/362 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+   +LG   L+ ++F   L +GY       + LI      G   +A+   + +  
Sbjct: 108 SILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLA 167

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              + N V+Y  +I+   K G   K  +E+   +    V+ D + +N+++    +  L  
Sbjct: 168 LGFQLNQVSYRTLINGLCKVG-QTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVN 226

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A + ++EMV + I   + TYNTL+  +C   Q+  A  ++ +M  +NI+P V T+S ++
Sbjct: 227 DAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILV 286

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D + K G++ +A N+F  M    +  + V+YN++++ Y  +    +A  +   M   G+ 
Sbjct: 287 DAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVA 346

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  +Y+ ++ G+ K    DE  ++FE+M    + P+++TY++LID   K G    A+++
Sbjct: 347 PDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKL 406

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             E    G   +++ Y++L+DALCKN  V+ A+ LL ++    I+P+V TYN +I+   +
Sbjct: 407 IGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCK 466

Query: 557 SA 558
           S 
Sbjct: 467 SG 468



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 191/361 (52%), Gaps = 3/361 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L   G +  A +  +  L  G+     ++  LI+   + G  + A+ +   +  
Sbjct: 143 TTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDG 202

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLW 315
             ++ ++V YN +ID   K  +      + + +M+   + P  +T+N+L+  +C  G L 
Sbjct: 203 KLVRLDVVMYNTIIDGVCKDKL-VNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLK 261

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +A   L ++M+   I+  ++T++ L+DA CK  ++  A  +   M  K++ PN+VTY+++
Sbjct: 262 DAI-GLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSL 320

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ++GY     ++ A ++F+ M  +G+  D  SY+ ++S + K+   +EA+ + +EM    I
Sbjct: 321 MNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQI 380

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VTYN+L+ G  K G+     ++  +M      PN++TY++L+D   K     +A++
Sbjct: 381 FPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIE 440

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +  + K   ++  V  Y+ LI+ LCK+G ++ A  + +++   G   +V TYN++I  F 
Sbjct: 441 LLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFC 500

Query: 556 R 556
           +
Sbjct: 501 K 501



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 150/300 (50%), Gaps = 5/300 (1%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV-DFKHVVEI 286
           V  ++ +I    +     +A   ++ M    + P +VTYN +I  CG   +   K  + +
Sbjct: 209 VVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLI--CGLCIMGQLKDAIGL 266

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
              M+   + P   TF+ L+ A C  G + EA +N+F  M+ + +  +I TYN+L++  C
Sbjct: 267 LHKMILENINPTVYTFSILVDAFCKEGKVKEA-KNVFVVMMKKDVKPNIVTYNSLMNGYC 325

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
              +++ A  I   M    ++P+V +YS MI G+ K   +D+A+ +F EM    I  D V
Sbjct: 326 LVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVV 385

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +YN+++    K GR   AL +  EM   G   + +TYN+LL    K    D+   +  ++
Sbjct: 386 TYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKL 445

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           K   + P++ TY+ LI+   K G  K+A ++F +    G   DV  Y+ +I   CK G V
Sbjct: 446 KDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 184/387 (47%), Gaps = 18/387 (4%)

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           P  I F  +L    +   +    +L  +M   GI  ++ T + L++   +     L+F +
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
            + +  K   P+ +T +T+I G    G +  AL+   ++  LG  L++VSY T+++   K
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
           +G+ + AL + + ++   +R D V YN ++ G  K    ++    + +M A  + P ++T
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVT 246

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y+TLI      G  K+A+ +  +     +   V  +S L+DA CK G V+ A ++   M 
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMM 306

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG- 595
           K+ ++PN+VTYNS+++ +       C V++V +        A +          +  +G 
Sbjct: 307 KKDVKPNIVTYNSLMNGY-------CLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGF 359

Query: 596 ---RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC-------ILGVFQKMHKLKIKPNV 645
              +  ++ +K+F ++  ++            + LC        L +  +MH     PN+
Sbjct: 360 CKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNI 419

Query: 646 VTFSAILNACSRCNSFEDASMLLEELR 672
           +T++++L+A  + +  + A  LL +L+
Sbjct: 420 ITYNSLLDALCKNHHVDKAIELLTKLK 446



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 64/117 (54%), Gaps = 2/117 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  L + G++  A  +     + G    +  +++L+ A  ++ +  +AI +   +K 
Sbjct: 388 NSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKD 447

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
           +N++P++ TYN +I+   K G   K   ++F+D+L NG   D  T+N+++   C +G
Sbjct: 448 HNIQPSVCTYNILINGLCKSG-RLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 175/324 (54%), Gaps = 1/324 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V   + +I      G    A  ++  M      P++ TY+ ++    K G  F   V + 
Sbjct: 313 VVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLG-RFGSAVRML 371

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           D+M   G  P+ +T+++LL    R G+W+ AR + ++M+ +G   +   YN ++ A+CK 
Sbjct: 372 DEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKD 431

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            ++D A  ++ EM ++   P++ TY+TMI        +++A ++F  +   G+  + ++Y
Sbjct: 432 GKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITY 491

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           NT++    + GR++E L +  EM   G + D ++YN L+    K+G  D    + E+M  
Sbjct: 492 NTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVT 551

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + PN  +Y+ LI+   K G  ++A+++ +E    GL  D+V Y+ LI+ LCK G   +
Sbjct: 552 KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHA 611

Query: 528 AVSLLDEMTKEGIRPNVVTYNSII 551
           A++LL+++  E + P++VTYN +I
Sbjct: 612 ALNLLEKLPNENVHPDIVTYNILI 635



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 225/490 (45%), Gaps = 38/490 (7%)

Query: 202 ILGRLGKVDL---AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +L  L + D    A  ++   L +    T + F     A  R G   +A+++   M R+ 
Sbjct: 148 VLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMARHG 207

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL-LAVCSRGGLWE 316
             P+ V Y  VI A   +GGV       + D+ML  G   D  TFN L L +C  G + E
Sbjct: 208 CVPDAVLYQTVIHALVAQGGV--AEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVRE 265

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AAR L + M+ +G    + TY  LL  +C+  Q D A  ++  +P      NVV  +T+I
Sbjct: 266 AAR-LVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLP----EVNVVMLNTVI 320

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G    G+L  A  ++  M   G   D  +Y+ ++    KLGRF  A+ +  EME  G  
Sbjct: 321 RGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCA 380

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + VTY+ LL  + + G +D+ R M +QM A   S N   Y+ +I    K G   +A ++
Sbjct: 381 PNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRL 440

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +E K  G K D+  Y+ +I  LC N L+E A  +   + +EG+  N +TYN++I A  R
Sbjct: 441 VQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLR 500

Query: 557 SATTE-------------CTVDDVERD--LGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
           +   +             C +D +  +  +    +  N+D   +  ++ V +  + +N  
Sbjct: 501 NGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNN-- 558

Query: 602 IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
              +  L+ E    GK  +         L + ++M    + P++VT++ ++N   +    
Sbjct: 559 -FSYNMLINELCKAGKVRD--------ALELSKEMLNQGLTPDIVTYNTLINGLCKVGWT 609

Query: 662 EDASMLLEEL 671
             A  LLE+L
Sbjct: 610 HAALNLLEKL 619



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 222/500 (44%), Gaps = 65/500 (13%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L RLG+   A  +       G       +  +I A    G   EA  + + M       +
Sbjct: 187 LCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAAD 246

Query: 263 LVTYN-AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCS---------- 310
           + T+N  V+  CG G V  +    + D M+  G  P  +T+  LL  +C           
Sbjct: 247 VNTFNDLVLGLCGLGRV--REAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304

Query: 311 ----------------RGGLWEA----ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
                           RG L E     A  L+  M  +G   D+ TY+ L+  +CK  + 
Sbjct: 305 LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRF 364

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
             A  ++ EM  K  +PN+VTYST++  + + G  DDA  M  +M   G  ++   YN +
Sbjct: 365 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGI 424

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +    K G+ ++A  + +EM+S G + D  TYN ++         +E   +F  +  + V
Sbjct: 425 IYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGV 484

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
             N +TY+TLI    + G ++E +++  E    G + DV+ Y+ LI ALCK G V+ +++
Sbjct: 485 VANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMA 544

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
           LL+EM  +GI+PN  +YN +I+   ++              GK +++  L        K+
Sbjct: 545 LLEEMVTKGIKPNNFSYNMLINELCKA--------------GKVRDALEL-------SKE 583

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
           +   G T +  I  +  L+      G             L + +K+    + P++VT++ 
Sbjct: 584 MLNQGLTPD--IVTYNTLINGLCKVGWTH--------AALNLLEKLPNENVHPDIVTYNI 633

Query: 651 ILNACSRCNSFEDASMLLEE 670
           +++   +    +DA+MLL++
Sbjct: 634 LISWHCKVRLLDDAAMLLDK 653



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 178/351 (50%), Gaps = 3/351 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A  ++E   ++G    V+ +S L+    + G    A+ + + M+     PN+VTY
Sbjct: 327 GKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTY 386

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEM 325
           + ++ +  + G+ +     + D ML  G   +   +N ++ A+C  G L +A R L  EM
Sbjct: 387 STLLHSFCRNGM-WDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATR-LVQEM 444

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             +G   DI TYNT++  +C    M+ A  I   +  + +  N +TY+T+I    + GR 
Sbjct: 445 KSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRW 504

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            + L + SEM   G  LD +SYN ++    K G  + ++ + +EM + GI+ +  +YN L
Sbjct: 505 QEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNML 564

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +    K GK  +   + ++M    ++P+++TY+TLI+   K G    A+ +  +     +
Sbjct: 565 INELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENV 624

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             D+V Y+ LI   CK  L++ A  LLD+    GI PN  T+  ++  F R
Sbjct: 625 HPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVR 675



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 159/311 (51%), Gaps = 7/311 (2%)

Query: 145 ILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +L + E K C  +   Y+ LL      G W  A       + +    N QG   + +I  
Sbjct: 370 MLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGY--NGIIYA 427

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + GK+D A  + +   ++G    +  ++ +I     +   +EA  +F ++    +  N
Sbjct: 428 LCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVAN 487

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
            +TYN +I A  + G  ++  + +  +ML +G Q D I++N L+ A+C  G + + +  L
Sbjct: 488 GITYNTLIHALLRNG-RWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNV-DRSMAL 545

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             EMV +GI  + F+YN L++ +CK  ++  A E+  EM  + ++P++VTY+T+I+G  K
Sbjct: 546 LEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCK 605

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G    ALN+  ++    +  D V+YN ++S + K+   ++A ++  +  S GI  +  T
Sbjct: 606 VGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERT 665

Query: 442 YNALLGGYGKQ 452
           +  ++  + +Q
Sbjct: 666 WGMMVQNFVRQ 676



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 199/488 (40%), Gaps = 44/488 (9%)

Query: 284 VEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
           + + D M R   V P   ++N +L+  +R      A  L+  M+   +    FT+     
Sbjct: 126 LHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAAR 185

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A+C+  +   A  ++  M      P+ V Y T+I      G + +A  +  EM  +G   
Sbjct: 186 ALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAA 245

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D  ++N ++     LGR  EA  +   M + G     VTY  LL G  +  + DE   M 
Sbjct: 246 DVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAML 305

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            ++       N++  +T+I      G    A +++      G   DV  YS L+  LCK 
Sbjct: 306 GRLP----EVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKL 361

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           G   SAV +LDEM ++G  PN+VTY++++ +F R+       DD           A LD 
Sbjct: 362 GRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMW----DDAR---------AMLDQ 408

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
           M +   K      +  N II    +        GK +   R        + Q+M     K
Sbjct: 409 MLA---KGFSMNSQGYNGIIYALCK-------DGKLDQATR--------LVQEMKSQGCK 450

Query: 643 PNVVTFSAILNACSRCNSFEDASM----LLEELRLFDNQVYG-VAHGLLMGYRDNIWVQA 697
           P++ T++ ++      +  E+A      L+EE  + +   Y  + H LL   R+  W + 
Sbjct: 451 PDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALL---RNGRWQEG 507

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLH 757
           L L  E+ L         YN L   L   G    +  ++ E   + +  N +S + L   
Sbjct: 508 LRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINE 567

Query: 758 LMSSGAAR 765
           L  +G  R
Sbjct: 568 LCKAGKVR 575


>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/497 (26%), Positives = 232/497 (46%), Gaps = 47/497 (9%)

Query: 141 SLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--A 198
           +L     KF  KL   +   F+L+    RG+   A + F +A K+   KN   K+    +
Sbjct: 105 NLDSYCSKFLIKL-SPNFVAFVLKSDAIRGKPDIAFRFFWWAGKQ---KNYIHKIECYVS 160

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I +L      D  + IF     +G+  TV+A ++LI ++G  G  +E + V+  MK   
Sbjct: 161 LIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESG 220

Query: 259 LKPNLVTYNAVIDA------------------CGKGGVDF----------------KHVV 284
           ++P+L T+N +++                   CGK G D                 K  +
Sbjct: 221 IEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAM 280

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           E F DM +  ++PD+IT+ +L+  C   G +++  +L+ EM  RG++     Y+ ++  +
Sbjct: 281 EKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGL 340

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK  +      +   M  K    NV  Y+ +ID Y K G +++A+N+F  MK  G   D 
Sbjct: 341 CKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDD 400

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V+Y  +++   K GR +EA+   +  + + +  +A+ Y++L+ G GK G+ DE  + FE+
Sbjct: 401 VTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEE 460

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M       +   Y+ LID  +K G  +EA+ +F+  ++ G    V  Y+ LI  L K   
Sbjct: 461 MVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHR 520

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT--ECTVDDVERDLGKQKESANLDA 582
            E A+ L D M  +GI P   ++ ++      S      C + D    +G   E+A  D 
Sbjct: 521 NEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPETAFEDM 580

Query: 583 MCSQDDKDVQEAGRTDN 599
           +       + +AGRT+ 
Sbjct: 581 I-----NVLCKAGRTEQ 592



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 180/405 (44%), Gaps = 30/405 (7%)

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           I  Y +L+D +   +  D    I  E   K     V   +++I  +   G +++ L ++ 
Sbjct: 155 IECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWR 214

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            MK  GI     ++N +L+        E A  V + ME   I  D V+YN ++ GY K G
Sbjct: 215 RMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAG 274

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
              +    F  M+   + P+ +TY TLI      G +   + +++E ++ GL+     YS
Sbjct: 275 NTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYS 334

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            +I  LCK+G      S+ + M K+G + NV  Y ++IDA+G++      ++  ER  G+
Sbjct: 335 LVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGE 394

Query: 574 QKESAN------LDAMCSQDDKDVQEAGR-----TDNQII--KVFGQLVAEKAGQGKKEN 620
             E  +      ++ +C     D  EA        DN++    +F   + +  G+  + +
Sbjct: 395 GFEPDDVTYGVIVNGLCKSGRLD--EAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVD 452

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL--FDNQV 678
              +        F++M +     +   ++A+++A ++    E+A +L + +     D  V
Sbjct: 453 EAEK-------FFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTV 505

Query: 679 YG---VAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALT 720
           Y    +  GL   +R+    +AL L+D +     +  +A + AL+
Sbjct: 506 YTYTILISGLFKEHRNE---EALKLWDLMIDKGITPTTASFRALS 547


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 232/473 (49%), Gaps = 28/473 (5%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD A ++F   L +      + F+ ++ +  +S +    +S+   M+   +KPNL   N 
Sbjct: 67  VDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNI 126

Query: 269 VIDACGKGGVDFKHVVEIF---DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           +I    + G+    + + F   D ++  G   D++++ +L+    + G   AA +L   +
Sbjct: 127 LIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRV 186

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             + +  +   YNT++  +CK   ++ AF++ +EM +K ISPNVVTYS +I G+   G+L
Sbjct: 187 DGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKL 246

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            DA+++F+++    I  D  ++N ++  + K  + +E   V   M   GI  D VTYN+L
Sbjct: 247 KDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSL 306

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + GY    + +  + +F  M    V+P++ +Y+ LI+ + K     +AM +F E     +
Sbjct: 307 MDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNI 366

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
             +VV Y++LID L K+G +  A+ L+D+M   G+ PN++TYNSIIDA  ++   +  + 
Sbjct: 367 IPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIA 426

Query: 566 DVE--RDLGKQKE----SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
            +   +D G Q      +  +D +C  +  D+     T N +I  F              
Sbjct: 427 LITKFKDQGIQPSMYTYTILIDGLCKVEGYDI--TVNTYNVMIHGF-------------- 470

Query: 620 NRCRQEILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             C++ +    L +  KM      PN VT+   + +    N  + A  L  E+
Sbjct: 471 --CKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREM 521



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 195/392 (49%), Gaps = 30/392 (7%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           V+ A +++   +++G    V  +SALIS +   G  ++AI +FN +   N+KP+  T+N 
Sbjct: 211 VNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNI 270

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           ++D   K     K    +F  M++ G+ PD +T+NSL+           A+++FN M   
Sbjct: 271 LVDGFCKDR-KMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQG 329

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G++ DI +YN L++  CK  ++D A  +  EM  KNI PNVVTY+++IDG +K+GR+  A
Sbjct: 330 GVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYA 389

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           L +  +M   G+  + ++YN+++    K  + ++A+ +  + +  GI+    TY  L+ G
Sbjct: 390 LQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDG 449

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             K   YD             ++ N  TY+ +I  + K GL+ EA+ +  + K +    +
Sbjct: 450 LCKVEGYD-------------ITVN--TYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPN 494

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            V Y   I +L  N   + A  L  EM   G+               RSA+  C+   + 
Sbjct: 495 AVTYEITIRSLLDNNENDKAEKLFREMITRGL-------------LNRSASYPCSSMKIH 541

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
           + L   + +   D+   Q  KDV+    TDN+
Sbjct: 542 QSLTMVQHTW-CDSCSHQPKKDVRLLLSTDNK 572



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 157/338 (46%), Gaps = 40/338 (11%)

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           K N ++Y++          D    V +F+ +LR    P    FN +L    +   +    
Sbjct: 48  KINFISYSST-STTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVL 106

Query: 320 NLFNEMVHRGIDQDIF---------------------------------------TYNTL 340
           +L  +M  RGI  ++F                                       +Y TL
Sbjct: 107 SLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTL 166

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +  +CK  +   A +++  +  K +  N V Y+T+I G  K   ++DA +++SEM   GI
Sbjct: 167 IHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGI 226

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             + V+Y+ ++S +  +G+ ++A+ +  ++    I+ D  T+N L+ G+ K  K  E + 
Sbjct: 227 SPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKT 286

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F  M    + P+++TY++L+D Y        A  IF    Q G+  D+  Y+ LI+  C
Sbjct: 287 VFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFC 346

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           K   V+ A++L +EM  + I PNVVTYNS+ID   +S 
Sbjct: 347 KIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSG 384



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 152/310 (49%), Gaps = 18/310 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+IS    +GK+  A ++F   + E      Y F+ L+  + +    +E  +VF  M +
Sbjct: 234 SALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMK 293

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + P++VTYN+++D  C    V+      IF+ M + GV PD  ++N L+    +    
Sbjct: 294 QGIIPDVVTYNSLMDGYCLVKEVNTAK--SIFNTMAQGGVNPDIRSYNILINGFCKIKKV 351

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A NLFNEM  + I  ++ TYN+L+D + K  ++  A +++ +M  + + PN++TY+++
Sbjct: 352 DKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSI 411

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID   K  ++D A+ + ++ K  GI     +Y  ++    K+                G 
Sbjct: 412 IDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKV---------------EGY 456

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
                TYN ++ G+ K+G +DE   +  +MK     PN +TY   I          +A +
Sbjct: 457 DITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEK 516

Query: 496 IFREFKQAGL 505
           +FRE    GL
Sbjct: 517 LFREMITRGL 526



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 32/273 (11%)

Query: 186 EERKNDQGKLASAMISILGRL----------------GKVDLAKNIFETALNEGYGNTVY 229
           ++RK  +GK   AM+   G +                 +V+ AK+IF T    G    + 
Sbjct: 277 KDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIR 336

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           +++ LI+ + +     +A+++FN M   N+ PN+VTYN++ID   K G    + +++ D 
Sbjct: 337 SYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSG-RISYALQLVDQ 395

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   GV P+ +T+NS++    +    + A  L  +   +GI   ++TY  L+D +CK   
Sbjct: 396 MHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEG 455

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            D+                V TY+ MI G+ K G  D+AL++ S+MK      + V+Y  
Sbjct: 456 YDIT---------------VNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEI 500

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
            +         ++A  + +EM + G+   + +Y
Sbjct: 501 TIRSLLDNNENDKAEKLFREMITRGLLNRSASY 533


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 190/370 (51%), Gaps = 15/370 (4%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+ D A+ +F+  L       V AF+ L+    + G   E+  +   + +  + PNL T+
Sbjct: 195 GEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTF 254

Query: 267 NAVIDA-CGKGGVD-------FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           N  +   C +G +D            E    M+  G +PD +T+NS++    + G+ + A
Sbjct: 255 NIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDA 314

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +  + V +G   D FTY +L++  CK    D A  +  +   K + P++V Y+T+I G
Sbjct: 315 NRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKG 374

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
            ++ G +  AL + +EM   G   +  +YN V++   K+G   +A  +  +  + G   D
Sbjct: 375 LSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPD 434

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
             TYN L+ GY KQ K D    M  +M +  ++P+++TY+TL++   K G  +E M+IF+
Sbjct: 435 IFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFK 494

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
             ++ G   +++ Y+ ++D+LCK   V  AV LL EM  +G++P+VV++ ++   F    
Sbjct: 495 AMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGF---- 550

Query: 559 TTECTVDDVE 568
              C + D++
Sbjct: 551 ---CKIGDID 557



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 176/353 (49%), Gaps = 2/353 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R  +V  A+      +N G+      ++++I  Y + G  Q+A  V         KP+  
Sbjct: 272 RNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEF 331

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TY ++I+   K G D    + +F D L  G++P  + +N+L+   S+ GL   A  L NE
Sbjct: 332 TYCSLINGFCKDG-DPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNE 390

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G   +I+TYN +++ +CK   +  A  ++ +  AK   P++ TY+T+IDGY K  +
Sbjct: 391 MAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLK 450

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD A  M + M   G+  D ++YNT+L+   K G+ EE + + K ME  G   + +TYN 
Sbjct: 451 LDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNI 510

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF-KQA 503
           ++    K  K +E   +  +MK+  + P+++++ TL   + K G    A Q+FR   KQ 
Sbjct: 511 IVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQY 570

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +      Y+ ++ A  +   +  A+ L   M   G  P+  TY  +ID F +
Sbjct: 571 DVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCK 623



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 175/367 (47%), Gaps = 13/367 (3%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAI---------S 249
           ++ +L + G V  ++ +    L  G    ++ F+  +    R G    A+          
Sbjct: 222 LVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEE 281

Query: 250 VFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
               M     +P+ +TYN++ID  C KG V  +    +  D +  G +PD  T+ SL+  
Sbjct: 282 YLRKMVNGGFEPDDLTYNSIIDGYCKKGMV--QDANRVLKDAVFKGFKPDEFTYCSLING 339

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
             + G  + A  +F + + +G+   I  YNTL+  + +   +  A ++M EM      PN
Sbjct: 340 FCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPN 399

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           + TY+ +I+G  K G + DA ++  +    G   D  +YNT++  Y K  + + A  +  
Sbjct: 400 IWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVN 459

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            M S G+  D +TYN LL G  K GK +EV  +F+ M+    +PN++TY+ ++D   K  
Sbjct: 460 RMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAK 519

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE-GIRPNVVTY 547
              EA+ +  E K  GLK DVV +  L    CK G ++ A  L   M K+  +     TY
Sbjct: 520 KVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATY 579

Query: 548 NSIIDAF 554
           N I+ AF
Sbjct: 580 NIIVSAF 586



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 178/359 (49%), Gaps = 8/359 (2%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++I+   + G  D A  +F+  L +G   ++  ++ LI    + G    A+ + N M   
Sbjct: 335 SLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAEN 394

Query: 258 NLKPNLVTYNAVIDACGKGGV--DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              PN+ TYN VI+   K G   D  H+V   DD +  G  PD  T+N+L+    +    
Sbjct: 395 GCLPNIWTYNLVINGLCKMGCVSDASHLV---DDAIAKGCPPDIFTYNTLIDGYCKQLKL 451

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           ++A  + N M  +G+  D+ TYNTLL+ +CK  + +   EI   M  K  +PN++TY+ +
Sbjct: 452 DSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNII 511

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS-G 434
           +D   KA ++++A+++  EMK  G+  D VS+ T+ + + K+G  + A  + + ME    
Sbjct: 512 VDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYD 571

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +     TYN ++  + +Q   +   ++F  MK     P+  TY  +ID + K G   +  
Sbjct: 572 VCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGY 631

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           +   E  +      +  +  +++ LC    V  AV ++  M ++GI P  V  N+I +A
Sbjct: 632 KFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV--NTIFEA 688



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 127/530 (23%), Positives = 246/530 (46%), Gaps = 50/530 (9%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKN-DQGKLASAMISIL---GRLGKVDL 211
           A  Y  ++++LG+ GE+ +  +  +     E R+N +   L  A I  +   GR GKV  
Sbjct: 40  ASTYKCIVQKLGHHGEFEEMEKLLS-----EMRENVNNALLEGAYIEAMKNYGRKGKVQE 94

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A + FE         +V++ +A+++     GY  +A  V+  M+   ++ ++ TY   I 
Sbjct: 95  AVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIK 154

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           +  K    +   + +  +M   G   + + + +++A     G  + AR LF+EM+ R + 
Sbjct: 155 SFCKTARPYA-ALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLC 213

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL-- 389
            D+  +N L+  +CK   +  +  ++ ++  + + PN+ T++  + G  + G LD A+  
Sbjct: 214 PDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRN 273

Query: 390 -------NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
                      +M   G   D ++YN+++  Y K G  ++A  V K+    G + D  TY
Sbjct: 274 SRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTY 333

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
            +L+ G+ K G  D    +F+      + P+++ Y+TLI   S+ GL   A+Q+  E  +
Sbjct: 334 CSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAE 393

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
            G   ++  Y+ +I+ LCK G V  A  L+D+   +G  P++ TYN++ID + +    + 
Sbjct: 394 NGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDS 453

Query: 563 TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
             + V R             M SQ        G T + I   +  L+      GK E   
Sbjct: 454 ATEMVNR-------------MWSQ--------GMTPDVI--TYNTLLNGLCKAGKSEE-- 488

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                 ++ +F+ M +    PN++T++ I+++  +     +A  LL E++
Sbjct: 489 ------VMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMK 532



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/205 (20%), Positives = 93/205 (45%), Gaps = 2/205 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +++ L + GK +    IF+    +G    +  ++ ++ +  ++    EA+ +   MK 
Sbjct: 474 NTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKS 533

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLW 315
             LKP++V++  +     K G D     ++F  M +   V     T+N +++  S     
Sbjct: 534 KGLKPDVVSFGTLFTGFCKIG-DIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNM 592

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  LF+ M + G D D +TY  ++D  CK   +   ++ + E   K   P++ T+  +
Sbjct: 593 NMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRV 652

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGI 400
           ++      ++ +A+ +   M   GI
Sbjct: 653 LNCLCVKDKVHEAVGIIHLMLQKGI 677


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/511 (24%), Positives = 243/511 (47%), Gaps = 42/511 (8%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++ +L +LGKV  A ++       G    V ++S ++  Y +     + + +   ++R  
Sbjct: 258 ILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKG 317

Query: 259 LKPNLVTYNAVIDACGKGG--VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           LKPN  TYN++I    K G  V+ + V+ +   M    + PD + + +L++   + G   
Sbjct: 318 LKPNQYTYNSIISFLCKTGRVVEAEQVLRV---MKNQRIFPDNVVYTTLISGFGKSGNVS 374

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               LF+EM  + I  D  TY +++  +C+  ++  A ++ +EM +K + P+ VTY+ +I
Sbjct: 375 VEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALI 434

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DGY KAG + +A ++ ++M   G+  + V+Y  ++    K G  + A  +  EM   G++
Sbjct: 435 DGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQ 494

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +  TYNAL+ G  K G  ++  ++ E+M      P+ +TY+T++D Y K G   +A ++
Sbjct: 495 PNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHEL 554

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            R     GL+  +V ++ L++  C +G++E    L+  M  +GI PN  T+NS++  +  
Sbjct: 555 LRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQY-- 612

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
                C  +++          A ++       + V     T N +IK          G  
Sbjct: 613 -----CIRNNMR---------ATIEIYKGMHAQGVVPDTNTYNILIK----------GHC 648

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR---- 672
           K  N      L      ++M +        ++++++    +   FE+A  L EE+R    
Sbjct: 649 KARNMKEAWFL-----HKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGF 703

Query: 673 LFDNQVYGVAHGLLMGYRDNIWVQALSLFDE 703
           + + ++Y +   + + Y +  W   L L DE
Sbjct: 704 IAEKEIYDIF--VDVNYEEGNWENTLELCDE 732



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/505 (24%), Positives = 243/505 (48%), Gaps = 37/505 (7%)

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD-FKHVV 284
           NTV +++ ++    + G  +EA S+   M+     P++V+Y+ ++D  G   V+    V+
Sbjct: 251 NTV-SYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD--GYCQVEQLGKVL 307

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           ++ +++ R G++P++ T+NS+++   + G    A  +   M ++ I  D   Y TL+   
Sbjct: 308 KLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGF 367

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
            K   + + +++  EM  K I P+ VTY++MI G  +AG++ +A  +FSEM   G+  D 
Sbjct: 368 GKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDE 427

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V+Y  ++  Y K G  +EA  +  +M   G+  + VTY AL+ G  K G+ D    +  +
Sbjct: 428 VTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHE 487

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    + PN+ TY+ LI+   K G  ++A+++  E   AG   D + Y+ ++DA CK G 
Sbjct: 488 MSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGE 547

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           +  A  LL  M  +G++P +VT+N +++ F  S   E    D ER +             
Sbjct: 548 MAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLE----DGERLIKWML--------- 594

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
              DK +     T N ++K +                 R  +   + +++ MH   + P+
Sbjct: 595 ---DKGIMPNATTFNSLMKQYC---------------IRNNMRATIEIYKGMHAQGVVPD 636

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFD 702
             T++ ++    +  + ++A  L +E+      +   ++  L+   Y+   + +A  LF+
Sbjct: 637 TNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFE 696

Query: 703 EVKLMDSSTASAFYNALTDMLWHFG 727
           E++          Y+   D+ +  G
Sbjct: 697 EMRTHGFIAEKEIYDIFVDVNYEEG 721



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 187/377 (49%), Gaps = 5/377 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+   G  G  S   + F   +KR++   D     S MI  L + GKV  A+ +F  
Sbjct: 360 YTTLISGFGKSGNVSVEYKLFD-EMKRKKIVPDFVTYTS-MIHGLCQAGKVVEARKLFSE 417

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            L++G       ++ALI  Y ++G  +EA S+ N M    L PN+VTY A++D  C  G 
Sbjct: 418 MLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGE 477

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           VD  +  E+  +M   G+QP+  T+N+L+    + G  E A  L  EM   G   D  TY
Sbjct: 478 VDIAN--ELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITY 535

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            T++DA CK  +M  A E++  M  K + P +VT++ +++G+  +G L+D   +   M  
Sbjct: 536 TTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLD 595

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI  +  ++N+++  Y         + + K M + G+  D  TYN L+ G+ K     E
Sbjct: 596 KGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKE 655

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              + ++M     S    +Y++LI  + K   ++EA ++F E +  G  A+  +Y   +D
Sbjct: 656 AWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVD 715

Query: 518 ALCKNGLVESAVSLLDE 534
              + G  E+ + L DE
Sbjct: 716 VNYEEGNWENTLELCDE 732



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 199/429 (46%), Gaps = 8/429 (1%)

Query: 142 LGDILK---KFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA 196
           LG +LK   + + K    + YT+  ++  L   G   +A Q     V + +R      + 
Sbjct: 303 LGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQ--VLRVMKNQRIFPDNVVY 360

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS  G+ G V +   +F+    +        ++++I    ++G   EA  +F+ M  
Sbjct: 361 TTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLS 420

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             LKP+ VTY A+ID   K G + K    + + M+  G+ P+ +T+ +L+    + G  +
Sbjct: 421 KGLKPDEVTYTALIDGYCKAG-EMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVD 479

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L +EM  +G+  ++ TYN L++ +CK   ++ A ++M EM      P+ +TY+T++
Sbjct: 480 IANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIM 539

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y K G +  A  +   M   G+    V++N +++ +   G  E+   + K M   GI 
Sbjct: 540 DAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIM 599

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +A T+N+L+  Y  +        +++ M A  V P+  TY+ LI  + K    KEA  +
Sbjct: 600 PNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFL 659

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +E  + G       Y++LI    K    E A  L +EM   G       Y+  +D    
Sbjct: 660 HKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYE 719

Query: 557 SATTECTVD 565
               E T++
Sbjct: 720 EGNWENTLE 728



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 3/275 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A++  L + G+VD+A  +      +G    V  ++ALI+   + G  ++A+ +   M  
Sbjct: 466 TALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDL 525

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               P+ +TY  ++DA C  G +   H  E+   ML  G+QP  +TFN L+      G+ 
Sbjct: 526 AGFFPDTITYTTIMDAYCKMGEMAKAH--ELLRIMLDKGLQPTIVTFNVLMNGFCMSGML 583

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E    L   M+ +GI  +  T+N+L+   C    M    EI   M A+ + P+  TY+ +
Sbjct: 584 EDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNIL 643

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G+ KA  + +A  +  EM   G  L   SYN+++  + K  +FEEA  + +EM + G 
Sbjct: 644 IKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGF 703

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
             +   Y+  +    ++G ++    + ++    C+
Sbjct: 704 IAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCL 738


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 180/342 (52%), Gaps = 2/342 (0%)

Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV 283
           Y  TV+ ++ +I+   R+    +A  V   M   ++ PN+ TY  +++   +     K  
Sbjct: 84  YTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSN-KTKLA 142

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
            E+F +M RNG +P+ IT+ +L+   SR G  + A  +  E     +  D+ T  T++  
Sbjct: 143 REVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGG 202

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL-GIGL 402
           +CK +++D A + M EM    + PN VTYS ++ G+ + G LD  +  F E K   G  L
Sbjct: 203 LCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSL 262

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           +  +Y   L    K G  + A    +E+  SG+  D VTY+ L+  + + G++D    + 
Sbjct: 263 EAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELL 322

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           E M+ + V P+++TYSTLI+V  K   +++A ++    + AG   +VV Y++++D LCK+
Sbjct: 323 EDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKS 382

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           G ++    + + M K    P+VVTY+ I++   ++   +  V
Sbjct: 383 GKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAV 424



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 182/378 (48%), Gaps = 46/378 (12%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           AF+ L +   R     E + +F  +    +     TY  V+D  CG G  +    +E+  
Sbjct: 21  AFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMAN--QALELVR 78

Query: 289 DMLRNGV-QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           ++  +GV  P    +N ++    R      A  +  +MV   I  ++FTY  LL+ +C+ 
Sbjct: 79  EL--SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRS 136

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +  LA E+  EM      PN +TY T+I   ++AG +D+AL +  E + L +  D ++ 
Sbjct: 137 NKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITC 196

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
            T++    K  R ++AL   +EM   G+R + VTY+ L+ G+ + G+ D V R FE+ KA
Sbjct: 197 TTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKA 256

Query: 468 D-----------------C-------------------VSPNLLTYSTLIDVYSKGGLYK 491
                             C                   V P+++TYS LI+ +++ G + 
Sbjct: 257 RKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFD 316

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            ++++  + ++ G+K DVV YS LI+ LCK    + A  LL+ M   G  PNVVTYNS++
Sbjct: 317 ASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVM 376

Query: 552 DAFGRSATTECTVDDVER 569
           D   +S      +D+V R
Sbjct: 377 DGLCKSG----KMDEVHR 390



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 185/370 (50%), Gaps = 35/370 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L R  +V  A  + E  + E     V+ ++ L++   RS   + A  VF  MKR
Sbjct: 92  NGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKR 151

Query: 257 YNLKPNLVTYNAVIDACGKGG-VD---------------------------------FKH 282
              KPN +TY  +I    + G +D                                    
Sbjct: 152 NGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDD 211

Query: 283 VVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            ++  ++M + GV+P+ +T+++L+      G L    R    E   +G   +   Y   L
Sbjct: 212 ALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYL 271

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           DA+CK   +D A + + E+    + P+VVTYS +I+ +A+AG+ D +L +  +M+  G+ 
Sbjct: 272 DALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVK 331

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D V+Y+T++++  K  +F++A  + + ME++G   + VTYN+++ G  K GK DEV R+
Sbjct: 332 PDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRV 391

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           +E M     SP+++TYS +++  SK G+   A+++F   K +    D   YS +I +LC+
Sbjct: 392 YEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCR 451

Query: 522 NGLVESAVSL 531
            G +E A  +
Sbjct: 452 AGKLEEACGM 461



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 201/409 (49%), Gaps = 28/409 (6%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI-DQDIFTYN 338
           F  VV +F  +   GV     T+  ++      G+   A  L  E+   G+    +F YN
Sbjct: 35  FSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVREL--SGVYTPTVFIYN 92

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            ++  +C+ +++  A++++ +M  ++I PNV TY+ +++G  ++ +   A  +F EMK  
Sbjct: 93  GIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRN 152

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   + ++Y T++   ++ G  +EAL V  E  S  +  D +T   ++GG  K  + D+ 
Sbjct: 153 GCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDA 212

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK-QAGLKADVVLYSALID 517
            +  E+M+   V PN +TYS L+  + + G     ++ F E K + G   +   Y   +D
Sbjct: 213 LKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLD 272

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQK 575
           ALCK G ++ A   ++E+ + G+ P+VVTY+ +I+ F R+   + +++ +E  R  G + 
Sbjct: 273 ALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKP 332

Query: 576 E----SANLDAMCSQDD--------KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
           +    S  ++ +C +          + ++ AG   N +   +  ++      GK +   R
Sbjct: 333 DVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVV--TYNSVMDGLCKSGKMDEVHR 390

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                   V++ M K +  P+VVT+S I+N  S+    + A  L E ++
Sbjct: 391 --------VYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIK 431



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 169/374 (45%), Gaps = 38/374 (10%)

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AA+ L   +V  G   D   +  L   + + ++      +   + ++ +     TY  ++
Sbjct: 2   AAKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRV-SYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           DG   AG  + AL +  E+   G+    V  YN +++   +  R  +A  V ++M    I
Sbjct: 62  DGLCGAGMANQALELVRELS--GVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESI 119

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +  TY  LL G  +  K    R +F++MK +   PN +TY TLI   S+ G   EA++
Sbjct: 120 VPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALR 179

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +  E +   L  DV+  + ++  LCK   ++ A+  ++EM + G+RPN VTY++++  F 
Sbjct: 180 VMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFR 239

Query: 556 RSATTECTVDDVERDLGKQKESAN-------LDAMCS-----QDDKDVQEAGR------- 596
           +    +  +   E +  ++  S         LDA+C      +  K V+E  +       
Sbjct: 240 QHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDV 299

Query: 597 -TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
            T + +I  F      +AGQ              L + + M +  +KP+VVT+S ++N  
Sbjct: 300 VTYSMLINTFA-----RAGQFDAS----------LELLEDMRRNGVKPDVVTYSTLINVL 344

Query: 656 SRCNSFEDASMLLE 669
            +   F+DA  LLE
Sbjct: 345 CKERKFQDAFRLLE 358



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 150/320 (46%), Gaps = 10/320 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGK---VDLAKNI 215
           Y  L++ L   GE  +A++     V  E+R  +         +I+G L K   +D A   
Sbjct: 161 YGTLIQHLSRAGEIDEALR-----VMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKF 215

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK-RYNLKPNLVTYNAVIDACG 274
            E     G       +S L+  + + G     I  F   K R         Y   +DA  
Sbjct: 216 MEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALC 275

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K G       +  +++ ++GV PD +T++ L+   +R G ++A+  L  +M   G+  D+
Sbjct: 276 KAGY-LDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDV 334

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TY+TL++ +CK  +   AF ++  M A    PNVVTY++++DG  K+G++D+   ++  
Sbjct: 335 VTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEM 394

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M       D V+Y+ +++  +K G  + A+ + + ++SS    DA  Y+ ++    + GK
Sbjct: 395 MLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGK 454

Query: 455 YDEVRRMFEQMKADCVSPNL 474
            +E   M+  M+      N+
Sbjct: 455 LEEACGMYHGMEVTVAGDNI 474


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 154/630 (24%), Positives = 280/630 (44%), Gaps = 90/630 (14%)

Query: 30  HHRQSHHP----SSRPHWTSHKVSLTKPPLSPSPRNAPKPAATSTTVAPNPKPFHSLSPL 85
           HH   HH     SS+PH+ +H +  T   +S S          +T    NP P +SL+P 
Sbjct: 6   HHFHLHHNLVSFSSKPHYKNHDILYT---ISES---------INTIHNNNPNPDYSLNP- 52

Query: 86  PSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDI 145
             +   + P  +    T  ++      P +++ +  + +A                    
Sbjct: 53  --TLKRILPSLTSHHITNLINLNPLSLPPLSLFSFFNYLASRP----------------- 93

Query: 146 LKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGR 205
              F   L    +Y+ +   L +    S+    F F                 +IS +G 
Sbjct: 94  --PFRHTL---HNYSTMAHFLSSHNLLSQTHSLFLF-----------------IISKMGH 131

Query: 206 LGKVDLAKNIFETA-LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
                L  ++ +T   +  + ++V  F ALI AY  S + ++AI     +K+ N    + 
Sbjct: 132 HSSTSLISSLIQTVPTHHRHNHSVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVC 191

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
             + ++    K      H  E + ++L  G  P+   FN L+    + G    AR +F+E
Sbjct: 192 GCDYLLRRVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDE 251

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           +  RG+   + ++NTL+   C+   ++  F + + M ++ ISP+V TYS +I+G  K  R
Sbjct: 252 ISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESR 311

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +++A  +F EM  +G+  + V++ T++    K G+ + AL   + M+  GIR D +TYNA
Sbjct: 312 VEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNA 371

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G  + G   E R++  +M  +   P+ +T++TL+D   K G    A++I     + G
Sbjct: 372 LINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEG 431

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           ++ D V ++ALI  LC++G V  A  +L +M   G +P+  TY  +ID F       C  
Sbjct: 432 IELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCF-------CKK 484

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
            DV+              M ++  K++Q  GR    +   +  L+     QG+ +N    
Sbjct: 485 GDVK--------------MGAKLLKEMQRDGRVPGVV--TYNALMNGFCKQGQMKN---A 525

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNA 654
           ++L        M  +++ PN +TF+ +L+ 
Sbjct: 526 KML-----LHAMLNMEVVPNDITFNILLDG 550



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 140/272 (51%), Gaps = 1/272 (0%)

Query: 182 AVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
           +V   ER +      SA+I+ L +  +V+ A  +F+     G       F+ LI    + 
Sbjct: 285 SVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKH 344

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
           G    A+  F  MK   ++P+L+TYNA+I+   + G D K   ++ ++M+ NG +PD+IT
Sbjct: 345 GKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDG-DLKEARKLLNEMIGNGFKPDKIT 403

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           F +L+  C + G  ++A  + + MV  GI+ D   +  L+  +C+  ++  A  ++ +M 
Sbjct: 404 FTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDML 463

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
           +    P+  TY+ +ID + K G +     +  EM+  G     V+YN +++ + K G+ +
Sbjct: 464 SAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMK 523

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            A ++   M +  +  + +T+N LL G+ K G
Sbjct: 524 NAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 31/200 (15%)

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           PN+  ++ L+  + K G    A  +F E  + GL+  VV ++ LI   C++  VE    L
Sbjct: 224 PNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVL 283

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
              M  E I P+V TY+++I+   + +  E             + +   D MC       
Sbjct: 284 KSVMESERISPDVFTYSALINGLCKESRVE-------------EANGLFDEMC------- 323

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAI 651
            E G   N +   F  L+  +   GK +   R         F+ M    I+P+++T++A+
Sbjct: 324 -EMGLVPNGV--TFTTLIDGQCKHGKIDLALRN--------FEIMKDRGIRPDLITYNAL 372

Query: 652 LNACSRCNSFEDASMLLEEL 671
           +N   R    ++A  LL E+
Sbjct: 373 INGLCRDGDLKEARKLLNEM 392


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 190/330 (57%), Gaps = 7/330 (2%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           A+  ++ +  ++G   +A+ VF +MK  +  P+LVTYN +I++ C  G  +F   +++F 
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAG--EFGKALDLFQ 69

Query: 289 DMLRNG-VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            M R   V+PDR T+N+L++     G  E AR L +EM  + I  ++FTY++++ ++ K 
Sbjct: 70  SMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKE 129

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
           A+ + +++++ EM A   +P+V  ++ ++ G+A++  ++ A  ++  M   G   D VSY
Sbjct: 130 AKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSY 189

Query: 408 NTVLSIYAKLGRFEEALLVCKE--MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           + ++   AK+G+ +E+L +  E  M ++G   + +T++ L+ G  + G+ ++   +F  M
Sbjct: 190 HILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSM 249

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
                 PN  TY+TLI    +     +A ++F +  QA +  D V Y++LI   CK G +
Sbjct: 250 LEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSM 309

Query: 526 ESAVSLLDEMT-KEGIRPNVVTYNSIIDAF 554
           + A  L  EM+   G++P +VT+N++ID F
Sbjct: 310 DEAEKLYREMSGGAGLQPTIVTFNTLIDGF 339



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 194/392 (49%), Gaps = 5/392 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+    N GE+ KA+  F  ++KRE+R        + +IS L   G  + A+ +   
Sbjct: 48  YNVLINSRCNAGEFGKALDLFQ-SMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSE 106

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             ++     V+ +S++I +  +    +E+  V   M      P++  +N V+    +   
Sbjct: 107 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSN- 165

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR--GIDQDIFT 336
           + +   E++  M+ +G +PD ++++ L+   ++ G  + +  + +EM  R  G   ++ T
Sbjct: 166 NMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVIT 225

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           ++TL+  +C+  +++ A E+   M      PN  TY+T+I G  +A ++  A  +F +M 
Sbjct: 226 FSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMT 285

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES-SGIRKDAVTYNALLGGYGKQGKY 455
              I  D V+YN++++ Y K G  +EA  + +EM   +G++   VT+N L+ G+ K GK 
Sbjct: 286 QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKL 345

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
                +  +M    ++ +  TY  LI   S+     EA++++++ ++     D V   + 
Sbjct: 346 GRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF 405

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           +  LCK G ++ A ++ +   K G  PN  T+
Sbjct: 406 VGGLCKTGNIDQAYAVFEATRKSGAVPNPETF 437



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 205/418 (49%), Gaps = 21/418 (5%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISIL-------GRLG 207
           G D Y F+++ L   G  ++A++ F      E  K++    +    ++L       G  G
Sbjct: 9   GGDAYDFVVQSLAKAGMLAQALEVF------ETMKSESCVPSLVTYNVLINSRCNAGEFG 62

Query: 208 KVDLAKNIFETALNEGYGNT-VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           K   A ++F++   E       + ++ LIS    SG  + A  + + M+  N+  N+ TY
Sbjct: 63  K---ALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTY 119

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           +++I +  K     +   ++ ++M+  G  PD   FN ++   +R    E AR ++  MV
Sbjct: 120 SSIIKSLVKEAKP-EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 178

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP--AKNISPNVVTYSTMIDGYAKAGR 384
             G   D  +Y+ L+  + K  ++D + +I++EM   A    PNV+T+ST+I G  + G 
Sbjct: 179 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGE 238

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           L+ AL +F  M   G   ++ +Y T+++   +  +  +A  + ++M  + I  DAV YN+
Sbjct: 239 LEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 298

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADC-VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           L+ GY K+G  DE  +++ +M     + P ++T++TLID + K G    A ++  E    
Sbjct: 299 LIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 358

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           GL AD   Y  LI  L +   ++ A+ +  +M ++    + V+  S +    ++   +
Sbjct: 359 GLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNID 416



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 150/308 (48%), Gaps = 4/308 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN--SMKRYNLK 260
             R   ++ A+ +++  +  GY     ++  LI    + G   E++ + +  +M+     
Sbjct: 161 FARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYV 220

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           PN++T++ +I    + G + +  +E+F  ML  G +P++ T+ +L+A   R      AR 
Sbjct: 221 PNVITFSTLIHGLCRTG-ELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARE 279

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA-KNISPNVVTYSTMIDGY 379
           LF +M    I  D   YN+L+   CK   MD A ++  EM     + P +VT++T+IDG+
Sbjct: 280 LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 339

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K G+L  A  + +EM   G+  D  +Y  +++  ++  + +EAL V K+M       D 
Sbjct: 340 CKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDP 399

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           V+  + +GG  K G  D+   +FE  +     PN  T+  L +   K G  ++A ++   
Sbjct: 400 VSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEP 459

Query: 500 FKQAGLKA 507
            K   + A
Sbjct: 460 AKARDITA 467



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 141/273 (51%), Gaps = 6/273 (2%)

Query: 199 MISILGRLGKVDLAKNIF-ETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +I  L ++GK+D +  I  E A+   GY   V  FS LI    R+G  ++A+ VF SM  
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLW 315
              KPN  TY  +I    +         E+F+ M +  + PD + +NSL+A  C RG + 
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAE-KVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMD 310

Query: 316 EAARNLFNEMVH-RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           EA + L+ EM    G+   I T+NTL+D  CK  ++  A E++AEM  K ++ +  TY  
Sbjct: 311 EAEK-LYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRI 369

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I G ++A +LD+AL ++ +M+     LD VS  + +    K G  ++A  V +    SG
Sbjct: 370 LIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSG 429

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
              +  T+  L     K G+ ++ +++ E  KA
Sbjct: 430 AVPNPETFRILSESLIKLGRVEDAQKLMEPAKA 462



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 129/302 (42%), Gaps = 32/302 (10%)

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y  ++   AKAG L  AL +F  MK        V+YN +++     G F +AL + + M+
Sbjct: 13  YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72

Query: 432 SSG-IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
               +  D  TYN L+ G    G  +  R++  +M+   ++ N+ TYS++I    K    
Sbjct: 73  REKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKP 132

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           +E+ ++  E   AG   DV  ++ ++    ++  +E A  +   M + G +P+ V+Y+ +
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
           I    +              +GK  ES  +       +  ++ AG   N I   F  L+ 
Sbjct: 193 IHGLAK--------------IGKLDESLKI-----LSEMAMRAAGYVPNVI--TFSTLI- 230

Query: 611 EKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
                      CR  E+   L VF  M +   KPN  T++ ++    R      A  L E
Sbjct: 231 --------HGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFE 282

Query: 670 EL 671
           ++
Sbjct: 283 KM 284


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 238/482 (49%), Gaps = 56/482 (11%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRY-------------------NLKPNLVTYNA 268
           +  ++ L+ A+ ++G    A S+FN +  +                   NL+P LVTY  
Sbjct: 267 IVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTT 326

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           +I A C   GV+  H   ++  M+ NG+ PD +T +S+L   C  G L EAA  LF EM 
Sbjct: 327 LIAAYCKFVGVEESH--SLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV-LFREMY 383

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G+D +  +Y T+++++ K  ++  AF + ++M  + IS ++VT +T++DG  K G+  
Sbjct: 384 EMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTK 443

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A  +F  +  L +  + V+Y+ +L  Y KLG+ E A LV ++ME   +  + +T+++++
Sbjct: 444 EAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSII 503

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GY K+G   +   +  +M    V PN + Y+ LID Y K G    A    +E K   L+
Sbjct: 504 NGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLE 563

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
              V++  L++ L + G ++ A SL+ +M  +GI P++V Y S+ID + +          
Sbjct: 564 ESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEG-------- 615

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
                    + A L  +    +K+++      N +IK   +L       GK + R     
Sbjct: 616 --------NQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRL-------GKYDPRY---- 656

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
                V  +M +L + P+ +T++ I+N        EDA  +L E++ +      V + +L
Sbjct: 657 -----VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNIL 711

Query: 687 MG 688
           +G
Sbjct: 712 IG 713



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 202/412 (49%), Gaps = 47/412 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L + G+V  A N+    +  G    +   + ++    + G  +EA  VF ++ +
Sbjct: 395 ATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILK 454

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            NL PN VTY+A++D  C  G ++   +V     M +  V P+ ITF+S++   ++ G+ 
Sbjct: 455 LNLAPNCVTYSALLDGYCKLGKMELAELV--LQKMEKEHVPPNVITFSSIINGYAKKGML 512

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A ++  EMV R +  +   Y  L+D   K  + D+A +   EM ++ +  + V +  +
Sbjct: 513 SKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDIL 572

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ++   + GR+D+A ++  +M   GI  D V+Y +++  Y K G    AL + +EM+   I
Sbjct: 573 LNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNI 632

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R D V YNAL+ G  + GKYD  R +  +M    ++P+ +TY+T+I+ Y   G  ++A+ 
Sbjct: 633 RFDVVAYNALIKGLLRLGKYDP-RYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALD 691

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVS------------------------- 530
           I  E K  G+  + V Y+ LI  LCK G V + ++                         
Sbjct: 692 ILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLV 751

Query: 531 -----------LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
                      +LDEM K GI  ++VTYN++I  +       CT   VE+ L
Sbjct: 752 ASGLELKRQKVVLDEMVKRGISADLVTYNALIRGY-------CTGSHVEKAL 796



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 184/380 (48%), Gaps = 37/380 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA++    +LGK++LA+ + +    E     V  FS++I+ Y + G   +A+ V   M +
Sbjct: 465 SALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQ 524

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIF-DDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            N+ PN + Y  +ID   K G   + V + F  +M    ++   + F+ LL    R G  
Sbjct: 525 RNVMPNTIVYAILIDGYFKAGE--QDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRM 582

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + AR+L  +M  +GID DI  Y +L+D   K      A  I+ EM  KNI  +VV Y+ +
Sbjct: 583 DEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNAL 642

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G  + G+ D    + S M  LG+  D ++YNT+++ Y   G+ E+AL +  EM+S GI
Sbjct: 643 IKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGI 701

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +AVTYN L+GG  K G                  P  +T+  L+  YS+     + +Q
Sbjct: 702 MPNAVTYNILIGGLCKTG----------------FVPTPITHKFLVKAYSRSEKADKILQ 745

Query: 496 I-----------------FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           I                   E  + G+ AD+V Y+ALI   C    VE A+    +M  +
Sbjct: 746 IHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVD 805

Query: 539 GIRPNVVTYNSIIDAFGRSA 558
           GI PN+ TYN+++     + 
Sbjct: 806 GIAPNITTYNTLLGGLSNAG 825



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 196/458 (42%), Gaps = 90/458 (19%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F  M   G+ P    +N+LL   +  GL    + ++++M+  G+  D+F+ N L+ ++CK
Sbjct: 82  FSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCK 141

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +DLA   +      +I    VTY+T+I G+ + G +D    + SEM   G+  D ++
Sbjct: 142 VGDLDLALGYLRNNDVVDIDN--VTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSIT 199

Query: 407 YNTVLSIYAKLGRFE-----------------------------EALLVCKEME------ 431
            N ++  Y ++G  +                             EA+L+ +  E      
Sbjct: 200 CNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSW 259

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM-----------KADCVS--------P 472
            S ++ D VTYN LL  + K G       +F ++             D V+        P
Sbjct: 260 RSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQP 319

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
            L+TY+TLI  Y K    +E+  ++++    G+  DVV  S+++   C++G +  A  L 
Sbjct: 320 TLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLF 379

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM--------- 583
            EM + G+ PN V+Y +II++  +S              G+  E+ NL +          
Sbjct: 380 REMYEMGLDPNHVSYATIINSLFKS--------------GRVMEAFNLQSQMVVRGISFD 425

Query: 584 ---CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VF 633
              C+     + + G+T  +  +VF  ++               +  C LG       V 
Sbjct: 426 IVTCTTVMDGLFKVGKT-KEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVL 484

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           QKM K  + PNV+TFS+I+N  ++      A  +L E+
Sbjct: 485 QKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREM 522



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 180/410 (43%), Gaps = 56/410 (13%)

Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
           +  R  +   +   +++ L R+G++D A+++     ++G    +  +++LI  Y + G  
Sbjct: 558 KSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQ 617

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGK-GGVDFKHVVEIFDDMLRNGVQPDRITFN 303
             A+S+   MK  N++ ++V YNA+I    + G  D ++V      M+  G+ PD IT+N
Sbjct: 618 LAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCS---RMIELGLAPDCITYN 674

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK----------------- 346
           +++      G  E A ++ NEM   GI  +  TYN L+  +CK                 
Sbjct: 675 TIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAY 734

Query: 347 -------------------GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
                              G ++     ++ EM  + IS ++VTY+ +I GY     ++ 
Sbjct: 735 SRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEK 794

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL----VCKEMESSGIRKDAVTYN 443
           AL  +S+M   GI  +  +YNT+L   +  G  EE +     +  EM   G+  +A TY+
Sbjct: 795 ALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYD 854

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+ GYG+ G   +   +  +M      P L TY+ LI  Y+K G   EA ++  +    
Sbjct: 855 ILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTK 914

Query: 504 GLKADVVLYSAL------------IDALCKNGLVESAVSLLDEMTKEGIR 541
           G   +   Y  L            ID   K         LL EM ++G++
Sbjct: 915 GRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGLK 964



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 157/323 (48%), Gaps = 18/323 (5%)

Query: 170 GEWSKAIQCFAFAVKRE-ERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGN 226
           G + +  Q  A ++ +E + KN +  + +  A+I  L RLGK D  + +    +  G   
Sbjct: 610 GYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAP 668

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG-----VDFK 281
               ++ +I+ Y   G  ++A+ + N MK Y + PN VTYN +I    K G     +  K
Sbjct: 669 DCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHK 728

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            +V+ +        + D+I       + + G   +  + + +EMV RGI  D+ TYN L+
Sbjct: 729 FLVKAYS----RSEKADKI-LQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALI 783

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG----RLDDALNMFSEMKF 397
              C G+ ++ A +  ++M    I+PN+ TY+T++ G + AG     +++   + SEM  
Sbjct: 784 RGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNE 843

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  +  +Y+ ++S Y ++G  ++ +++  EM + G      TYN L+  Y K GK  E
Sbjct: 844 RGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIE 903

Query: 458 VRRMFEQMKADCVSPNLLTYSTL 480
            R +   +      PN  TY  L
Sbjct: 904 ARELLNDLLTKGRIPNSFTYDIL 926



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 69/342 (20%), Positives = 134/342 (39%), Gaps = 78/342 (22%)

Query: 404 RVSYNTVLSIYA---KLGRFEEALLVCKEMESSGIRKDAVT------------YNALLGG 448
           RV  NT++  ++   +L RF     + +   SS I KD++             +  L+  
Sbjct: 10  RVQTNTLIFFFSPPTRLRRFFYPTPITRTF-SSQIHKDSIFIPPTKTHLYVSFFCTLIRL 68

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           Y    ++      F  M+A  + P L  ++TL+  ++  GL  +   ++ +    G+  D
Sbjct: 69  YLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPD 128

Query: 509 VVLYSALIDALCK---------------------------------NGLVESAVSLLDEM 535
           V   + L+ +LCK                                  GLV+    LL EM
Sbjct: 129 VFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEM 188

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTE----CTVDDVERDLGKQKESAN--LDAMC----- 584
            K G+  + +T N ++  + R    +       + V+  + K     N  +D  C     
Sbjct: 189 VKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLM 248

Query: 585 SQDDKDVQEAGRTDNQI-IKVFGQLVAEKAGQGKKENRCRQEILC--ILGVFQKMHKLK- 640
           SQ  + ++ + R+D +I I  +  L+      G   +  R E L   ILG ++   +LK 
Sbjct: 249 SQATELIENSWRSDVKIDIVTYNTLLKAFCKTG---DLTRAESLFNEILGFWKDEDRLKN 305

Query: 641 -----------IKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                      ++P +VT++ ++ A  +    E++  L +++
Sbjct: 306 NDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKM 347


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 196/396 (49%), Gaps = 8/396 (2%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR-YNLKPNLV 264
           LG V+ AK + +    +G    V  ++ LI  Y +     EA  V   M+    L P+  
Sbjct: 240 LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDER 299

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
            Y  +ID  C  G +D    V + D+MLR G++ +    NSL+   C RG + EA   + 
Sbjct: 300 AYGVLIDGYCRTGKID--DAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEA-EGVI 356

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
             MV   +  D ++YNTLLD  C+      AF +  +M  + I P V+TY+T++ G  + 
Sbjct: 357 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 416

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G  DDAL ++  M   G+  D V Y+T+L    K+  FE A  + K++ + G  K  +T+
Sbjct: 417 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 476

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           N ++ G  K GK  E   +F++MK    SP+ +TY TLID Y K     +A ++    ++
Sbjct: 477 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 536

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
             +   + +Y++LI  L K+  +     LL EM   G+ PN+VTY ++ID + +    + 
Sbjct: 537 EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 596

Query: 563 TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
                  ++ +   SAN+  +CS     +   GR D
Sbjct: 597 AFSSY-FEMTENGLSANI-IICSTMVSGLYRLGRID 630



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 241/511 (47%), Gaps = 53/511 (10%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R GK+D A  + +  L  G    ++  ++LI+ Y + G   EA  V   M  +NLKP+  
Sbjct: 310 RTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSY 369

Query: 265 TYNAVIDACGKGGVDFKHVVEIF---DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +YN ++D   + G    H  E F   D ML+ G++P  +T+N+LL    R G ++ A  +
Sbjct: 370 SYNTLLDGYCREG----HTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI 425

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           ++ M+ RG+  D   Y+TLLD + K    + A  +  ++ A+  + + +T++TMI G  K
Sbjct: 426 WHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK 485

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G++ +A  +F +MK LG   D ++Y T++  Y K     +A  V   ME   I      
Sbjct: 486 MGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEM 545

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN+L+ G  K  +  EV  +  +M    ++PN++TY  LID + K G+  +A   + E  
Sbjct: 546 YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 605

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN----------VVTYNSII 551
           + GL A++++ S ++  L + G ++ A  L+ +M   G  P+                I 
Sbjct: 606 ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIA 665

Query: 552 DAFGRSATTECTVDDVERDL--------GKQKESANLDAMCSQDD--------------- 588
           D+   S  T    +++  ++        GK  ++    +M S                  
Sbjct: 666 DSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 725

Query: 589 ---KDVQEAGRTDNQIIK--VFGQLVAEKA---GQGKKENRCRQEILCILGVFQKMHKLK 640
               +V EA R  +++++  +   +V   A   G  K EN  R + L     F K+H+  
Sbjct: 726 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL-----FHKLHQKG 780

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           + PNVVT++ +++   +  + + A  L +++
Sbjct: 781 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 811



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 197/424 (46%), Gaps = 47/424 (11%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL+ L   G +  A+Q +   +KR    ++ G   S ++  L ++   + A  +++ 
Sbjct: 406 YNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVG--YSTLLDGLFKMENFEGASTLWKD 463

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L  G+  +   F+ +IS   + G   EA  +F+ MK     P+ +TY  +ID   K   
Sbjct: 464 ILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS- 522

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR-----NLFNEMVHRGIDQD 333
           +     ++   M R  + P    +NSL++     GL+++ R     +L  EM  RG+  +
Sbjct: 523 NVGQAFKVKGAMEREPISPSIEMYNSLIS-----GLFKSRRLVEVTDLLTEMGIRGLTPN 577

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF- 392
           I TY  L+D  CK   +D AF    EM    +S N++  STM+ G  + GR+D+A N+  
Sbjct: 578 IVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA-NLLM 636

Query: 393 -----------------SEMKFLGI-----GLDR----------VSYNTVLSIYAKLGRF 420
                            S++++  I      LD           + YN  ++   K G+ 
Sbjct: 637 QKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKV 696

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           ++A      +   G   D  TY  L+ GY   G  DE  R+ ++M    + PN++TY+ L
Sbjct: 697 DDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNAL 756

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I+   K      A ++F +  Q GL  +VV Y+ LID  CK G +++A  L D+M +EGI
Sbjct: 757 INGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGI 816

Query: 541 RPNV 544
            P++
Sbjct: 817 SPSI 820



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 220/475 (46%), Gaps = 61/475 (12%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG------------ 277
            F  ++  Y   G  + A+ VF++M +    P+L + N++++   K G            
Sbjct: 124 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 183

Query: 278 VDFKHVVEIF----------------------DDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           +    V ++F                        M   GV+P+ +T++SL+      G  
Sbjct: 184 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 243

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYST 374
           EAA+ +   M  +G+ +++ TY  L+   CK  +MD A +++  M  +  + P+   Y  
Sbjct: 244 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 303

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDGY + G++DDA+ +  EM  LG+  +    N++++ Y K G   EA  V   M    
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 363

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++ D+ +YN LL GY ++G   E   + ++M  + + P +LTY+TL+    + G + +A+
Sbjct: 364 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 423

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           QI+    + G+  D V YS L+D L K    E A +L  ++   G   + +T+N++I   
Sbjct: 424 QIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 483

Query: 555 ---GRSATTECTVDDVERDLGKQKESAN----LDAMCSQDDKDVQEAGRTDNQI------ 601
              G+    E   D + +DLG   +       +D  C     +V +A +    +      
Sbjct: 484 CKMGKMVEAEEIFDKM-KDLGCSPDGITYRTLIDGYCKA--SNVGQAFKVKGAMEREPIS 540

Query: 602 --IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
             I+++  L++     G  ++R   E+  +L    +M    + PN+VT+ A+++ 
Sbjct: 541 PSIEMYNSLIS-----GLFKSRRLVEVTDLL---TEMGIRGLTPNIVTYGALIDG 587



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 226/501 (45%), Gaps = 78/501 (15%)

Query: 255 KRYNLKPNLVTY--------------------NAVIDAC---GKGGVDFKHVVEIFDDML 291
           K+ N +PN+ +Y                    N ++D C    +G V +  +V ++ +  
Sbjct: 60  KQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREF- 118

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
                P    F+ +L V    GL + A  +F+ M   G    + + N+LL+ + K  +  
Sbjct: 119 --AFSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETH 174

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A  +  +M    I P+V   S M++ + K G++D+A     +M+ LG+  + V+Y++++
Sbjct: 175 TAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLI 234

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD-CV 470
           + Y  LG  E A  V K M   G+ ++ VTY  L+ GY KQ K DE  ++   M+ +  +
Sbjct: 235 NGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAAL 294

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            P+   Y  LID Y + G   +A+++  E  + GLK ++ + ++LI+  CK G +  A  
Sbjct: 295 VPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 354

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCSQDDK 589
           ++  M    ++P+  +YN+++D + R               G   E+ NL D M  +   
Sbjct: 355 VITRMVDWNLKPDSYSYNTLLDGYCRE--------------GHTSEAFNLCDKMLQE--- 397

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
            ++    T N ++K   ++ A                   L ++  M K  + P+ V +S
Sbjct: 398 GIEPTVLTYNTLLKGLCRVGAFDDA---------------LQIWHLMMKRGVAPDEVGYS 442

Query: 650 AILNACSRCNSFEDASMLLEEL--------RL-FDNQVYGVAHGLLMGYRDNIWVQALSL 700
            +L+   +  +FE AS L +++        R+ F+  + G+     MG      V+A  +
Sbjct: 443 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK---MGK----MVEAEEI 495

Query: 701 FDEVKLMDSSTASAFYNALTD 721
           FD++K +  S     Y  L D
Sbjct: 496 FDKMKDLGCSPDGITYRTLID 516


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 177/322 (54%), Gaps = 7/322 (2%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y ++ LI AY + G   EA+ VF+ M++  L P+ VTY AVI    K G   +  +  F+
Sbjct: 342 YVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSG-RVEDAMLYFE 400

Query: 289 DMLRNGVQPDRITFNSL---LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
            M+  G+ P  I +NSL   L  C++   WE A  L  EM+ RGI  +   +N+++D+ C
Sbjct: 401 QMIDEGLSPGNIVYNSLIHGLCTCNK---WERAEELILEMLDRGICLNTIFFNSIIDSHC 457

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  ++  + ++   M    + P+++TYST+IDGY  AG++D+A+ + S M  +G+  + V
Sbjct: 458 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTV 517

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y T+++ Y K+ R  +AL++ KEMESSG+  D +TYN +L G  +  +    + ++ ++
Sbjct: 518 TYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 577

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
                   L TY+ ++    K  L  +A+++F+      LK +   ++ +IDAL K G  
Sbjct: 578 TESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 637

Query: 526 ESAVSLLDEMTKEGIRPNVVTY 547
             A  L    +  G+ PN  TY
Sbjct: 638 GEAKDLFVAFSSNGLVPNYWTY 659



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/523 (24%), Positives = 233/523 (44%), Gaps = 47/523 (8%)

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           P++V+Y  VI+   K G D       + +ML   + PD +T++S++A   +G   + A  
Sbjct: 194 PDVVSYTTVINGFFKEG-DSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAME 252

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN-----VVTYSTM 375
           +   MV  G+  +  TY +++   C   Q   A   + ++ +  + P+     + TY T+
Sbjct: 253 VLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTL 312

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + GYA  G L     +   M   GI  D   YN ++  YAK G+ +EA+LV  +M   G+
Sbjct: 313 LQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGL 372

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             DAVTY A++G   K G+ ++    FEQM  + +SP  + Y++LI        ++ A +
Sbjct: 373 NPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 432

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +  E    G+  + + ++++ID+ CK G V  +  L D M + G++P+++TY+++ID + 
Sbjct: 433 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY- 491

Query: 556 RSATTECTVDDVERDLGKQKESANL-DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
                 C         GK  E+  L   M S   K      RT      + G     + G
Sbjct: 492 ------CLA-------GKMDEAMKLLSGMVSVGLKPNTVTYRT-----LINGYCKISRMG 533

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
                          L +F++M    + P+++T++ IL    +      A  L   +   
Sbjct: 534 DA-------------LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 580

Query: 675 DNQV----YGVA-HGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQK 729
             Q+    Y +  HGL    ++ +   AL +F  + LMD    +  +N + D L   G+ 
Sbjct: 581 GTQIELSTYNIILHGLC---KNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 637

Query: 730 RGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWL 772
             A+ + +      +  N W+   +  +++  G    +   +L
Sbjct: 638 GEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFL 680



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 184/378 (48%), Gaps = 41/378 (10%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    V +++ +I+ + + G   +A S ++ M    + P++VTY+++I A  KG      
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQA-MDK 249

Query: 283 VVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAA---RNLFNEMVH-RGIDQDIFTY 337
            +E+   M++NGV P+  T+ S++   CS G   EA    + + ++ V   G++ DI TY
Sbjct: 250 AMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATY 309

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TLL        +     ++  M    I P+   Y+ +I  YAK G++D+A+ +FS+M+ 
Sbjct: 310 CTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQ 369

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG--------- 448
            G+  D V+Y  V+ I  K GR E+A+L  ++M   G+    + YN+L+ G         
Sbjct: 370 QGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 429

Query: 449 --------------------------YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
                                     + K+G+  E  ++F+ M    V P+++TYSTLID
Sbjct: 430 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 489

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            Y   G   EAM++       GLK + V Y  LI+  CK   +  A+ L  EM   G+ P
Sbjct: 490 GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSP 549

Query: 543 NVVTYNSIIDAFGRSATT 560
           +++TYN I+    ++  T
Sbjct: 550 DIITYNIILQGLFQTRRT 567



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 201/409 (49%), Gaps = 10/409 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT ++      G+  KA   +   + R  R +      S++I+ L +   +D A  +  +
Sbjct: 199 YTTVINGFFKEGDSGKAYSTYHEMLDR--RISPDVVTYSSIIAALCKGQAMDKAMEVLTS 256

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN-----LKPNLVTYNAVIDA- 272
            +  G       +++++  Y  SG  +EAI     ++        L+P++ TY  ++   
Sbjct: 257 MVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGY 316

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
             KG +   H   + D M+RNG+ PD   +N L+   ++ G  + A  +F++M  +G++ 
Sbjct: 317 ATKGALVGMHA--LLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNP 374

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D  TY  ++  +CK  +++ A     +M  + +SP  + Y+++I G     + + A  + 
Sbjct: 375 DAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI 434

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            EM   GI L+ + +N+++  + K GR  E+  +   M   G++ D +TY+ L+ GY   
Sbjct: 435 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 494

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           GK DE  ++   M +  + PN +TY TLI+ Y K     +A+ +F+E + +G+  D++ Y
Sbjct: 495 GKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITY 554

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + ++  L +     +A  L   +T+ G +  + TYN I+    ++  T+
Sbjct: 555 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 603



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 171/333 (51%), Gaps = 1/333 (0%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           +G    +  +  L+  Y   G      ++ + M R  + P+   YN +I A  K G    
Sbjct: 300 DGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQG-KVD 358

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             + +F  M + G+ PD +T+ +++ +  + G  E A   F +M+  G+      YN+L+
Sbjct: 359 EAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 418

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             +C   + + A E++ EM  + I  N + ++++ID + K GR+ ++  +F  M  +G+ 
Sbjct: 419 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 478

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D ++Y+T++  Y   G+ +EA+ +   M S G++ + VTY  L+ GY K  +  +   +
Sbjct: 479 PDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVL 538

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F++M++  VSP+++TY+ ++    +      A +++    ++G + ++  Y+ ++  LCK
Sbjct: 539 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 598

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           N L + A+ +   +    ++    T+N +IDA 
Sbjct: 599 NKLTDDALRMFQNLCLMDLKLEARTFNIMIDAL 631



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 187/384 (48%), Gaps = 16/384 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+     +G+  +A+    F+  R++  N       A+I IL + G+V+ A   FE 
Sbjct: 344 YNILICAYAKQGKVDEAM--LVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQ 401

Query: 219 ALNEGY--GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
            ++EG   GN VY  ++LI         + A  +   M    +  N + +N++ID+  K 
Sbjct: 402 MIDEGLSPGNIVY--NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 459

Query: 277 GVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G     V+E   +FD M+R GV+PD IT+++L+      G  + A  L + MV  G+  +
Sbjct: 460 G----RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPN 515

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             TY TL++  CK ++M  A  +  EM +  +SP+++TY+ ++ G  +  R   A  ++ 
Sbjct: 516 TVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 575

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            +   G  ++  +YN +L    K    ++AL + + +    ++ +A T+N ++    K G
Sbjct: 576 RITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVG 635

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           +  E + +F    ++ + PN  TY  + +     GL +E  Q+F   +  G   D  + +
Sbjct: 636 RNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 695

Query: 514 ALIDALCKNGLVESA---VSLLDE 534
            ++  L + G +  A   +S++DE
Sbjct: 696 FIVRELLQRGEITRAGTYLSMIDE 719



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 190/457 (41%), Gaps = 49/457 (10%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG---IDQDIF 335
           D +HV   FD++LR G        N  LA  +R     AA + +N M   G   +   + 
Sbjct: 33  DARHV---FDELLRRGRGASIYGLNRALADVARHS-PAAAVSRYNRMARAGAGKVTPTVH 88

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM-FSE 394
           TY  L+   C+  ++DL F  +  +  K      +T++ ++ G     R  DA+++    
Sbjct: 89  TYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM---ESSGIRKDAVTYNALLGGYGK 451
           M  L    D  S   +L       R +EAL +   M      G   D V+Y  ++ G+ K
Sbjct: 149 MTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFK 208

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           +G   +    + +M    +SP+++TYS++I    KG    +AM++     + G+  +   
Sbjct: 209 EGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRT 268

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           Y++++   C +G  + A+  L ++  +G+ P         D       T CT+      L
Sbjct: 269 YTSIMHGYCSSGQPKEAIGFLKKVRSDGVEP---------DGLEPDIATYCTL------L 313

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
                   L  M +  D  V+     D+    V+  L+   A QGK +          + 
Sbjct: 314 QGYATKGALVGMHALLDLMVRNGIHPDHY---VYNILICAYAKQGKVDEA--------ML 362

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD------NQVY-GVAHG 684
           VF KM +  + P+ VT+ A++    +    EDA +  E+  + D      N VY  + HG
Sbjct: 363 VFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQ--MIDEGLSPGNIVYNSLIHG 420

Query: 685 LLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
           L      N W +A  L  E+        + F+N++ D
Sbjct: 421 LCTC---NKWERAEELILEMLDRGICLNTIFFNSIID 454



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 2/293 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V  ++ +F+  +  G    +  +S LI  Y  +G   EA+ + + M    LKPN VTY
Sbjct: 460 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 519

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
             +I+   K        + +F +M  +GV PD IT+N +L    +     AA+ L+  + 
Sbjct: 520 RTLINGYCKIS-RMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 578

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G   ++ TYN +L  +CK    D A  +   +   ++     T++ MID   K GR  
Sbjct: 579 ESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNG 638

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A ++F      G+  +  +Y  +       G  EE   +   ME +G   D+   N ++
Sbjct: 639 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 698

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
               ++G+          +     S    T S  ID+ S GG Y+E  +   E
Sbjct: 699 RELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLS-GGKYQEYHRFLPE 750


>gi|326490553|dbj|BAJ84940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 856

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 247/526 (46%), Gaps = 49/526 (9%)

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   D  TY T++  + +  Q     +++ EM + N  P VVTY+ +I  Y +A  L +A
Sbjct: 358 GFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYLREA 417

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           + +F EM+  G   DRV+Y T++ I+AK G  E A+ +   M+  G+  D  TY+A++  
Sbjct: 418 VKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNC 477

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            GK G+     ++F +M  +  +PNL+TY+ +I + +K   Y   ++++R+ + AG + D
Sbjct: 478 LGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIAGFRPD 537

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            + YS +++ L   G ++ A ++  EM ++   P+   Y  ++D +G++        +V+
Sbjct: 538 KITYSIVMEVLGHCGHLDEAEAVFLEMRRD-WAPDEPVYGLLVDLWGKAG-------NVD 589

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
           + LG         AM  QD   +Q    T N ++  F +L           NR +     
Sbjct: 590 KALGW------YHAML-QD--GLQPNVPTCNSLLSAFLKL-----------NRFQD---- 625

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
             GV Q M    + P++ T++ +L+ C+  ++     +  + + +  +     AH  L+ 
Sbjct: 626 AYGVLQNMLAQGLVPSLQTYTLLLSCCT--DAHAQMGLCCQLMAITGHP----AHMFLLY 679

Query: 689 YRD------NIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
             D      N+   A    D +   D  +     +A+ D L   G K  A  +     +R
Sbjct: 680 LPDAEPGGENVRDHARYFLDMMHSEDRESKRGIMDAVIDFLHKSGLKEEAGFIWEVAAQR 739

Query: 743 QVWENVWSESC-----LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGK 797
            V+ +   E       ++LHLMS G A   +   L   H  +      P+ + I+TGWG+
Sbjct: 740 NVYPDSVREKSSSYWLINLHLMSEGTAVTALSRTLAWFHRQMLLMGSCPERIDIVTGWGR 799

Query: 798 HSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWL 843
            S+V G   +R+++E LL     P + A  N G F+  G  ++ WL
Sbjct: 800 RSRVTGSSLVRQSIEKLLHLFQFPLFAARGNTGCFVGCGEPLSQWL 845



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 157/306 (51%), Gaps = 6/306 (1%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G+ +  + ++ +I   G++        + + M   N KP +VTYN +I A G+     + 
Sbjct: 358 GFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANY-LRE 416

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            V++F++M   G QPDR+T+ +L+ + ++ G  E A +L+  M   G+  D FTY+ +++
Sbjct: 417 AVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVN 476

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            + KG Q+  A+++  EM     +PN+VTY+ +I   AKA   D+ + ++ +M+  G   
Sbjct: 477 CLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIAGFRP 536

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D+++Y+ V+ +    G  +EA  V  EM       D   Y  L+  +GK G  D+    +
Sbjct: 537 DKITYSIVMEVLGHCGHLDEAEAVFLEMRRD-WAPDEPVYGLLVDLWGKAGNVDKALGWY 595

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI----DA 518
             M  D + PN+ T ++L+  + K   +++A  + +     GL   +  Y+ L+    DA
Sbjct: 596 HAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYTLLLSCCTDA 655

Query: 519 LCKNGL 524
             + GL
Sbjct: 656 HAQMGL 661



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 157/322 (48%), Gaps = 6/322 (1%)

Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
           F   +KR+      G   + MI ILG+  +    + + +   +     TV  ++ +I AY
Sbjct: 349 FFHWLKRQPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAY 408

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
           GR+ Y +EA+ VF  M+    +P+ VTY  +ID   K G   +  ++++  M   G+ PD
Sbjct: 409 GRANYLREAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGY-LEVAMDLYGRMQEVGLSPD 467

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
             T+++++    +GG   AA  LF EM+  G   ++ TYN ++    K    D   ++  
Sbjct: 468 TFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYR 527

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
           +M      P+ +TYS +++     G LD+A  +F EM+      D   Y  ++ ++ K G
Sbjct: 528 DMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMR-RDWAPDEPVYGLLVDLWGKAG 586

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
             ++AL     M   G++ +  T N+LL  + K  ++ +   + + M A  + P+L TY+
Sbjct: 587 NVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYT 646

Query: 479 TLI----DVYSKGGLYKEAMQI 496
            L+    D +++ GL  + M I
Sbjct: 647 LLLSCCTDAHAQMGLCCQLMAI 668



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 101/249 (40%), Gaps = 45/249 (18%)

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           +Q G K D   Y+ +I  L +     +   LLDEM+    +P VVTYN II A+GR+   
Sbjct: 355 RQPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYL 414

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
              V   E                     +++ AG   +++   +  L+   A  G  E 
Sbjct: 415 REAVKVFE---------------------EMEGAGYQPDRV--TYCTLIDIHAKSGYLE- 450

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQ--- 677
                    + ++ +M ++ + P+  T+SA++N   +      A  L  E  + DN    
Sbjct: 451 -------VAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCE--MIDNGCTP 501

Query: 678 ---VYGVAHGLLMGYR--DNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
               Y +   L    R  DN+    + L+ ++++         Y+ + ++L H G    A
Sbjct: 502 NLVTYNIIIALQAKARNYDNV----VKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEA 557

Query: 733 QLVVLEGKR 741
           + V LE +R
Sbjct: 558 EAVFLEMRR 566


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 230/511 (45%), Gaps = 42/511 (8%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V +++ +I+ +   G   +A ++F  M    ++PN+VTY  VID   K  V       +F
Sbjct: 203 VVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQV-VDRAEGVF 261

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
             M+  GV+PD  T+N L+      G W+    +  EM   G+  D +TY +LL+ +C  
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +   A  +   M  K I PNV  Y  +I GYA  G L +  ++ + M   G+  D   +
Sbjct: 322 GRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N + + YAK    +EA+ +  +M+  G+  D V Y AL+    K G+ D+    F QM  
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
           + V+PN+  +++L+        +++A + + E    G++ DVV ++ ++  LC  G V  
Sbjct: 442 EGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMK 501

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA-NLDAMCSQ 586
           A  L+D M + G RP V++Y ++I          C V       G+  E+A +LD M S 
Sbjct: 502 AQRLIDLMERVGTRPGVISYTTLIGG-------HCLV-------GRIDEAAKSLDVMLSV 547

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
             K  +            +  L+      G+ ++          GVF++M +  I P VV
Sbjct: 548 GLKPDEWT----------YNTLLHGYCRAGRIDDA--------YGVFREMLRNGITPGVV 589

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQ----VYGVAHGLLMGYRDNIWV-QALSLF 701
           T+S IL+       F +A  L   +     Q    +Y +   +L G   N  V +A  LF
Sbjct: 590 TYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI---ILNGLSKNNCVDEAFKLF 646

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
             +   D       +N +   L+  G+   A
Sbjct: 647 QSLCSKDFQLEITTFNIMIGALFKSGRNEDA 677



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 197/396 (49%), Gaps = 11/396 (2%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK- 213
           D YT+  LL  L N G   +A     F      RK  +  +A   I I G   K  L++ 
Sbjct: 307 DCYTYGSLLNYLCNNGRCREA----RFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEM 362

Query: 214 -NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
            ++    +  G     + F+ + +AY +     EA+ +FN MK+  L P++V Y A+IDA
Sbjct: 363 HDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDA 422

Query: 273 -CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            C  G VD    V  F+ M+  GV P+   FNSL+        WE A+  + EM+++GI 
Sbjct: 423 LCKLGRVD--DAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIR 480

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D+  +NT+L  +C   Q+  A  ++  M      P V++Y+T+I G+   GR+D+A   
Sbjct: 481 PDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKS 540

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
              M  +G+  D  +YNT+L  Y + GR ++A  V +EM  +GI    VTY+ +L G   
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFT 600

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
             ++ E + ++  M       N+  Y+ +++  SK     EA ++F+       + ++  
Sbjct: 601 TRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT 660

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           ++ +I AL K+G  E A+ L   ++  G+ P+V TY
Sbjct: 661 FNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTY 696



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 177/382 (46%), Gaps = 53/382 (13%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            +S LI  + R G  +   + F  + +   + N    N VI+   KG  D K + E  D 
Sbjct: 96  TYSILIGCFCRMGRLEHGFATFGLILKSGWRVN----NIVINQLLKGLCDAKRLCEAMDI 151

Query: 290 MLRN----GVQPDRITFNSLL----------------------------------AVCSR 311
           +++     G  PD +++N+LL                                  A+   
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211

Query: 312 G----GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
           G    G  + A NLF EM+ RGI  ++ TY T++D +CK   +D A  +  +M  K + P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           +  TY+ +I GY   G+  + + M  EM   G+  D  +Y ++L+     GR  EA  + 
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLF 331

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
             M   GI+ +   Y  L+ GY  +G   E+  +   M  + +SP+   ++ +   Y+K 
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
            +  EAM IF + KQ GL  DVV Y ALIDALCK G V+ AV   ++M  EG+ PN+  +
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 548 NSIIDAFGRSATTECTVDDVER 569
           NS++          CTVD  E+
Sbjct: 452 NSLVYGL-------CTVDKWEK 466



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 191/394 (48%), Gaps = 5/394 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  ++      G+  KA   F   + R  + N      + +I  L +   VD A+ +F+ 
Sbjct: 206 YAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVT--YTTVIDGLCKAQVVDRAEGVFQQ 263

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID-ACGKGG 277
            +++G       ++ LI  Y   G  +E + +   M  + LKP+  TY ++++  C  G 
Sbjct: 264 MIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGR 323

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              +    +FD M+R G++P+   +  L+   +  G      +L N MV  G+  D   +
Sbjct: 324 C--REARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N +  A  K A +D A  I  +M  + +SP+VV Y  +ID   K GR+DDA+  F++M  
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  +   +N+++     + ++E+A     EM + GIR D V +N +L     +G+  +
Sbjct: 442 EGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMK 501

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            +R+ + M+     P +++Y+TLI  +   G   EA +        GLK D   Y+ L+ 
Sbjct: 502 AQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLH 561

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             C+ G ++ A  +  EM + GI P VVTY++I+
Sbjct: 562 GYCRAGRIDDAYGVFREMLRNGITPGVVTYSTIL 595



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 204/420 (48%), Gaps = 7/420 (1%)

Query: 144 DILKKFEFKL-CGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMI 200
           DIL K   +L C  D   Y  LL+   N     +A++        + R      ++ A++
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 201 SILGRL--GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            I G    G+VD A N+F   ++ G    V  ++ +I    ++     A  VF  M    
Sbjct: 210 -INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           +KP+  TYN +I      G  +K VV + ++M  +G++PD  T+ SLL      G    A
Sbjct: 269 VKPDNDTYNCLIHGYLSIG-KWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREA 327

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           R LF+ M+ +GI  ++  Y  L+        +    +++  M    +SP+   ++ +   
Sbjct: 328 RFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTA 387

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           YAK   +D+A+++F++MK  G+  D V+Y  ++    KLGR ++A+L   +M + G+  +
Sbjct: 388 YAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPN 447

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
              +N+L+ G     K+++ +  + +M    + P+++ ++T++      G   +A ++  
Sbjct: 448 IFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLID 507

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
             ++ G +  V+ Y+ LI   C  G ++ A   LD M   G++P+  TYN+++  + R+ 
Sbjct: 508 LMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAG 567



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 184/392 (46%), Gaps = 38/392 (9%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           +GK      + E     G     Y + +L++    +G C+EA  +F+SM R  +KPN+  
Sbjct: 286 IGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAI 345

Query: 266 YNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           Y  +I     KG +   H  ++ + M+ NG+ PD   FN +    ++  + + A ++FN+
Sbjct: 346 YGILIHGYATKGALSEMH--DLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M  +G+  D+  Y  L+DA+CK  ++D A     +M  + ++PN+  +++++ G     +
Sbjct: 404 MKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLS----------------------------IYAK 416
            + A   + EM   GI  D V +NT+L                              Y  
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTT 523

Query: 417 L-------GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           L       GR +EA      M S G++ D  TYN LL GY + G+ D+   +F +M  + 
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           ++P ++TYST++        + EA +++     +G + ++ +Y+ +++ L KN  V+ A 
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAF 643

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            L   +  +  +  + T+N +I A  +S   E
Sbjct: 644 KLFQSLCSKDFQLEITTFNIMIGALFKSGRNE 675



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 118/519 (22%), Positives = 209/519 (40%), Gaps = 96/519 (18%)

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR-------GGLWEAARNLFNEMVHR 328
           G +     +++FD +L +      I FN LL   SR           E   +LFN M+  
Sbjct: 26  GSLGLDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRE 85

Query: 329 ---GIDQDIFTYNTLLDAICKGAQMDLAFE------------------------------ 355
               +  D  TY+ L+   C+  +++  F                               
Sbjct: 86  CTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRL 145

Query: 356 ------IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA---LNMFSEMKFLGIGLDRVS 406
                 ++  MP    +P+VV+Y+T++ G+    R ++A   L+M ++ +      + VS
Sbjct: 146 CEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVS 205

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y  V++ +   G+ ++A  +  EM   GI+ + VTY  ++ G  K    D    +F+QM 
Sbjct: 206 YAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI 265

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V P+  TY+ LI  Y   G +KE +++  E    GLK D   Y +L++ LC NG   
Sbjct: 266 DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCR 325

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A  L D M ++GI+PNV  Y  +I  +                L +  +  NL      
Sbjct: 326 EARFLFDSMIRKGIKPNVAIYGILIHGYATKGA-----------LSEMHDLLNL------ 368

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
               V+     D+ I  +     A+KA   +            + +F KM +  + P+VV
Sbjct: 369 ---MVENGLSPDHHIFNIIFTAYAKKAMIDEA-----------MHIFNKMKQQGLSPDVV 414

Query: 647 TFSAILNACSRCNSFEDASMLLEELR---------LFDNQVYGVAHGLLMGYRDNIWVQA 697
            + A+++A  +    +DA +   ++          +F++ VYG+          + W +A
Sbjct: 415 NYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC-------TVDKWEKA 467

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVV 736
              + E+          F+N +   L   GQ   AQ ++
Sbjct: 468 KEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLI 506


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 183/362 (50%), Gaps = 1/362 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+    LG++  + ++    L  GY       + L+      G  ++++   + +  
Sbjct: 171 SILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVA 230

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              + N V+Y  +++   K G + +  +++   +     +PD + +N+++    +  L  
Sbjct: 231 QGFQMNQVSYGTLLNGLCKIG-ETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVN 289

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A + + EM  RGI  D+ TY+TL+   C   Q+  AF ++ EM  KNI+P+V TY+ +I
Sbjct: 290 EAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILI 349

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D   K G+L +A N+   M   G+  + V+Y+T++  Y  +G    A  +   M  + + 
Sbjct: 350 DALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVN 409

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
               +YN ++ G  K    DE   +  +M    V PN +TY++LID   K G    A+ +
Sbjct: 410 PSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDL 469

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +E    G  ADV+ Y++L+D LCKN  ++ A++L  +M + GI+PN  TY ++ID   +
Sbjct: 470 MKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCK 529

Query: 557 SA 558
            A
Sbjct: 530 GA 531



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 218/446 (48%), Gaps = 34/446 (7%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
           ++  F  ++ +  +  +   AIS+   M+   ++P+LVT + +I+  C  G + F     
Sbjct: 131 SIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFS--FS 188

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +   +L+ G QP+ I   +L+      G  + + +  +++V +G   +  +Y TLL+ +C
Sbjct: 189 VLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLC 248

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  +   A +++  +  ++  P+VV Y+T+IDG  K   +++A + ++EM   GI  D +
Sbjct: 249 KIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVI 308

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y+T++  +   G+   A  +  EM    I  D  TY  L+    K+GK  E + +   M
Sbjct: 309 TYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVM 368

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             + V PN++TYSTL+D Y   G    A QIF    Q  +   V  Y+ +I+ LCK   V
Sbjct: 369 TKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSV 428

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           + A++LL EM  + + PN VTYNS+ID   +S      + D+ ++L  + + A++    S
Sbjct: 429 DEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSAL-DLMKELHHRGQPADVITYTS 487

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
             D      G   NQ +        +KA                + +F KM +  I+PN 
Sbjct: 488 LLD------GLCKNQNL--------DKA----------------IALFMKMKERGIQPNK 517

Query: 646 VTFSAILNACSRCNSFEDASMLLEEL 671
            T++A+++   +    ++A  L + +
Sbjct: 518 YTYTALIDGLCKGARLKNAQKLFQHI 543



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 190/396 (47%), Gaps = 5/396 (1%)

Query: 160 TFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETA 219
           T L++ L  +GE  K++      V +  + N        +++ L ++G+   A  +    
Sbjct: 206 TTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVS--YGTLLNGLCKIGETRCAIKLLRMI 263

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
            +      V  ++ +I    +     EA   +  M    + P+++TY+ +I      G  
Sbjct: 264 EDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAG-Q 322

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                 + ++M    + PD  T+  L+ A+C  G L EA +NL   M   G+  ++ TY+
Sbjct: 323 LMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEA-KNLLGVMTKEGVKPNVVTYS 381

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+D  C   ++  A +I   M    ++P+V +Y+ MI+G  K   +D+A+N+  EM   
Sbjct: 382 TLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHK 441

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            +  + V+YN+++    K GR   AL + KE+   G   D +TY +LL G  K    D+ 
Sbjct: 442 NVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKA 501

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +F +MK   + PN  TY+ LID   KG   K A ++F+     G   DV  Y+ +I  
Sbjct: 502 IALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGG 561

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           LCK G+++ A+++  +M   G  P+ VT+  II + 
Sbjct: 562 LCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSL 597



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 189/382 (49%), Gaps = 3/382 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL  L   GE   AI+       R  R +    + + +I  L +   V+ A + +  
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVV--MYNTIIDGLCKDKLVNEAYDFYTE 297

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + G    V  +S LI  +  +G    A S+ N M   N+ P++ TY  +IDA  K G 
Sbjct: 298 MNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEG- 356

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K    +   M + GV+P+ +T+++L+      G    A+ +F+ MV   ++  + +YN
Sbjct: 357 KLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYN 416

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            +++ +CKG  +D A  ++ EM  KN+ PN VTY+++IDG  K+GR+  AL++  E+   
Sbjct: 417 IMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHR 476

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   D ++Y ++L    K    ++A+ +  +M+  GI+ +  TY AL+ G  K  +    
Sbjct: 477 GQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNA 536

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
           +++F+ +       ++ TY+ +I    K G+  EA+ +  + +  G   D V +  +I +
Sbjct: 537 QKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRS 596

Query: 519 LCKNGLVESAVSLLDEMTKEGI 540
           L +    + A  LL EM  +G+
Sbjct: 597 LFEKDENDKAEKLLHEMIAKGL 618



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 208/452 (46%), Gaps = 33/452 (7%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           V  F+ ML     P  I F  +L    +   +  A +L  +M  +GI+ D+ T + L++ 
Sbjct: 117 VSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINC 176

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C   QM  +F ++ ++      PN +  +T++ G    G +  +L+   ++   G  ++
Sbjct: 177 FCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMN 236

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
           +VSY T+L+   K+G    A+ + + +E    R D V YN ++ G  K    +E    + 
Sbjct: 237 QVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYT 296

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M +  + P+++TYSTLI  +   G    A  +  E     +  DV  Y+ LIDALCK G
Sbjct: 297 EMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEG 356

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
            ++ A +LL  MTKEG++PNVVTY++++D +       C V +V     KQ   A +   
Sbjct: 357 KLKEAKNLLGVMTKEGVKPNVVTYSTLMDGY-------CLVGEVHN--AKQIFHAMVQ-- 405

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
            ++ +  V       N + K  G+ V E                  + + ++M    + P
Sbjct: 406 -TEVNPSVCSYNIMINGLCK--GKSVDEA-----------------MNLLREMLHKNVVP 445

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH-GLLMGYRDNIWV-QALSLF 701
           N VT++++++   +      A  L++EL         + +  LL G   N  + +A++LF
Sbjct: 446 NTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALF 505

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
            ++K          Y AL D L    + + AQ
Sbjct: 506 MKMKERGIQPNKYTYTALIDGLCKGARLKNAQ 537


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 143/555 (25%), Positives = 252/555 (45%), Gaps = 54/555 (9%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           + L+K +F   +  G      +F+ LI          EAI V   M+ Y   P+ +TYN 
Sbjct: 178 IRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNT 237

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           ++D  C KG ++     ++  DM   G+ P+R TFN L+  C R G  + A N+   M  
Sbjct: 238 ILDGLCKKGRLN--EARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQ 295

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
             +  D +TYN ++   CK  ++  A  +  EM    +SP+VVTY+T+I+G  + G  ++
Sbjct: 296 NSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEE 355

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
              +  EM+  G+  + V+YN ++  + K G+ +E     ++ME SG   D VTYN L+ 
Sbjct: 356 GFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLIS 415

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
            + K GK DE  R+ ++M    +  + +T +T++    +     EA  +    ++ G   
Sbjct: 416 WHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFV 475

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           D V Y  LI    K+     A+ L DEM ++ I P+++TYNS+I    +   T   +D +
Sbjct: 476 DEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKL 535

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
           +                     ++ E+G   ++I   +  ++     +G+ E        
Sbjct: 536 D---------------------ELLESGLVPDEI--TYNTIIHGYCQEGQVEK------- 565

Query: 628 CILGVFQ---KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN------QV 678
                FQ   KM +   KP+VVT + +L  C  C       ML + L+LF+        V
Sbjct: 566 ----AFQFHNKMVEKNFKPDVVTCNTLL--CGLCKE----GMLEKALKLFNTWISKGKDV 615

Query: 679 YGVAHG--LLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVV 736
             V++   +L   ++  + +A  L +E++          YNA+   L   G+ + A+  +
Sbjct: 616 DAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFI 675

Query: 737 LEGKRRQVWENVWSE 751
            +   +   EN + E
Sbjct: 676 SKIAEKGKSENQFLE 690



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 223/458 (48%), Gaps = 18/458 (3%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           RLG +  A N+ E           + ++ +IS + + G   EA+ +   M+   L P++V
Sbjct: 279 RLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVV 338

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TYN +I+ C + G   +   ++ ++M   G++P+ +T+N ++    + G  +       +
Sbjct: 339 TYNTLINGCFEHGSS-EEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRK 397

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G   DI TYNTL+   CK  +MD AF +M EM  K +  + VT +TM+    +  +
Sbjct: 398 MEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERK 457

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD+A ++    +  G  +D VSY T++  Y K  +  +AL +  EM+   I    +TYN+
Sbjct: 458 LDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNS 517

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++ G  + GK ++     +++    + P+ +TY+T+I  Y + G  ++A Q   +  +  
Sbjct: 518 MIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKN 577

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
            K DVV  + L+  LCK G++E A+ L +    +G   + V+YN+II +  +        
Sbjct: 578 FKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAF 637

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
           D +E     + E   L   C   +  +   G TD   +K   + +++ A +GK EN+  +
Sbjct: 638 DLLE-----EMEEKKLGPDCYTYNAIL--GGLTDAGRMKDAEEFISKIAEKGKSENQFLE 690

Query: 625 EILCILGVFQKMHKLKIK----PNVVTFSAILNA-CSR 657
                LG  Q     +I     PN + +S  +N  CS+
Sbjct: 691 -----LGKRQDARTSEIPQEPHPNAIAYSNKINELCSQ 723



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 220/443 (49%), Gaps = 41/443 (9%)

Query: 235 ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK--GGVDFKHVVEIFDDMLR 292
           I AY   G   +A  +FN MKR  ++P L+T N +++A  +       +    +F D ++
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190

Query: 293 NGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
            GV+ +  +FN L+   C      EA R +  +M   G   D  TYNT+LD +CK  +++
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIR-VLGKMRDYGCPPDNITYNTILDGLCKKGRLN 249

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A +++ +M  K + PN  T++ ++ G  + G L +A N+   M    +  D  +YN ++
Sbjct: 250 EARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMI 309

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           S + K GR  EA+ + +EME+  +  D VTYN L+ G  + G  +E  ++ E+M+   + 
Sbjct: 310 SGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMK 369

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           PN +TY+ ++  + K G   E  +  R+ +++G   D+V Y+ LI   CK G ++ A  L
Sbjct: 370 PNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRL 429

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
           +DEM ++G++ + VT N+++ A  R           ER L +       D +CS      
Sbjct: 430 MDEMGRKGLKMDDVTLNTMLRALCR-----------ERKLDEAH-----DLLCS-----A 468

Query: 592 QEAGRTDNQI---IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
           +  G   +++     + G    EKA Q              L ++ +M + +I P+++T+
Sbjct: 469 RRRGYFVDEVSYGTLIIGYFKHEKASQA-------------LRLWDEMKEKEIIPSIITY 515

Query: 649 SAILNACSRCNSFEDASMLLEEL 671
           ++++    +      A   L+EL
Sbjct: 516 NSMIAGLCQMGKTNQAIDKLDEL 538



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 194/420 (46%), Gaps = 36/420 (8%)

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICK---GAQMDLAFEIMAEMPAKNISPNVVTYST 374
           A  +FN M   G+   + T NTLL+A+ +      + L+  +  +     +  N  +++ 
Sbjct: 143 AAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNI 202

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I G     R  +A+ +  +M+  G   D ++YNT+L    K GR  EA  +  +M++ G
Sbjct: 203 LIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKG 262

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  +  T+N L+ G  + G   E   + E M  + V P+  TY+ +I  + K G   EAM
Sbjct: 263 LFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAM 322

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++  E +   L  DVV Y+ LI+   ++G  E    L++EM   G++PN VTYN ++  F
Sbjct: 323 RLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWF 382

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            +       +D+V++ + K +ES      C  D              I  +  L++    
Sbjct: 383 VKKGK----MDEVDKTVRKMEESG-----CLPD--------------IVTYNTLISWHCK 419

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
            GK +   R        +  +M +  +K + VT + +L A  R    ++A  LL   R  
Sbjct: 420 VGKMDEAFR--------LMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRR 471

Query: 675 DNQVYGVAHG-LLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
              V  V++G L++GY +     QAL L+DE+K  +   +   YN++   L   G+   A
Sbjct: 472 GYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQA 531


>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 670

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 228/472 (48%), Gaps = 33/472 (6%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           LG++     A  +F    + G     Y  + LI+A G      +A+ +F  M++  ++  
Sbjct: 192 LGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRRLSQALKLFRWMEKAGIERP 251

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           + T+NA++ ACG+        VE+F++M + G+ PDRITF  L++  +  GLW+ A++  
Sbjct: 252 IFTFNALMVACGRCASG-DTAVELFEEMEKLGIVPDRITFTGLVSATTAAGLWDRAQSFI 310

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           + M  RG    +  Y  +  A  +  +   A+ +   M  +     + +Y+ ++  Y + 
Sbjct: 311 DMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGYELKLESYNALLCAYERT 370

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
            + +DA+  F  ++  G+  D +S+++++S  A  G+ E AL V + M++S  + + V++
Sbjct: 371 AQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLERMKTSDCQPNVVSW 430

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             LL  Y K G +++   +F  M      PN + + +L+  Y KG  +K+ +    + ++
Sbjct: 431 CGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIEKLEE 490

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
            G+K DVV +S  I AL K G  E A     +MTK G  PN+VTY+S+I A+G     E 
Sbjct: 491 LGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVGLWE- 549

Query: 563 TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
             + V + + +     N  A C+               +++ +        G+GK     
Sbjct: 550 KAESVFKLMLRVGIRPNPQACCA---------------LLRAY--------GKGK----- 581

Query: 623 RQEILCILGVFQKMH-KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
             E+  ++  F+ M  +  ++P+   ++AI  AC  C  ++ A   ++ + +
Sbjct: 582 --ELEKVIIFFESMEPQYGVEPDKYAYAAIFWACWTCGEWQRAVKYIDRMEM 631



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/441 (22%), Positives = 193/441 (43%), Gaps = 39/441 (8%)

Query: 165 ELGNRGEWSKAIQCF-AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEG 223
           +LG    W  A + F AF   R         + + +I+ LG   ++  A  +F      G
Sbjct: 191 QLGQMQNWYAATKVFRAF---RSAGVEPNAYVCTTLIAALGCGRRLSQALKLFRWMEKAG 247

Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG------ 277
               ++ F+AL+ A GR      A+ +F  M++  + P+ +T+  ++ A    G      
Sbjct: 248 IERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSATTAAGLWDRAQ 307

Query: 278 ------------VDFKHVVE----------------IFDDMLRNGVQPDRITFNSLLAVC 309
                       +     +E                +F  ML  G +    ++N+LL   
Sbjct: 308 SFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGYELKLESYNALLCAY 367

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
            R   WE A   F  +  +G+  D+ ++++L+ A     Q + A E++  M   +  PNV
Sbjct: 368 ERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLERMKTSDCQPNV 427

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           V++  ++  Y K G  + A  +F  M   G   + V++ ++LS Y K  ++++ L   ++
Sbjct: 428 VSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIEK 487

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           +E  G++ D V ++  +    K G+++     F+QM      PN++TYS+LI  Y   GL
Sbjct: 488 LEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVGL 547

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE-GIRPNVVTYN 548
           +++A  +F+   + G++ +     AL+ A  K   +E  +   + M  + G+ P+   Y 
Sbjct: 548 WEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQYGVEPDKYAYA 607

Query: 549 SIIDAFGRSATTECTVDDVER 569
           +I  A       +  V  ++R
Sbjct: 608 AIFWACWTCGEWQRAVKYIDR 628



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 166/325 (51%), Gaps = 2/325 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  +F+  L +GY   + +++AL+ AY R+   ++A+  F  ++   L P++++++++I 
Sbjct: 341 AYGLFQVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLIS 400

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           AC   G   +  +E+ + M  +  QP+ +++  LL    + G WE A  +F+ M+  G  
Sbjct: 401 ACANAG-QAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCP 459

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            +   + +LL A  KG Q       + ++    +  +VV +ST I   AKAG+ + A   
Sbjct: 460 PNEVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEK 519

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F +M   G   + V+Y++++  Y  +G +E+A  V K M   GIR +     ALL  YGK
Sbjct: 520 FKQMTKSGCLPNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGK 579

Query: 452 QGKYDEVRRMFEQMKADC-VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
             + ++V   FE M+    V P+   Y+ +       G ++ A++     + AG   D V
Sbjct: 580 GKELEKVIIFFESMEPQYGVEPDKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSV 639

Query: 511 LYSALIDALCKNGLVESAVSLLDEM 535
           +Y+ LI+    NG ++ A+ +L+ M
Sbjct: 640 IYTTLINMYEANGQIDKAMQVLERM 664



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 151/310 (48%), Gaps = 2/310 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A++    R  + + A   F    ++G    V ++S+LISA   +G  + A+ V   MK 
Sbjct: 361 NALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLERMKT 420

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            + +PN+V++  ++ A  K G +++   EIF  ML +G  P+ + + SLL+   +G  W+
Sbjct: 421 SDCQPNVVSWCGLLKAYQKTG-NWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWK 479

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
                  ++   G+  D+  ++T + A+ K  Q +LA E   +M      PN+VTYS++I
Sbjct: 480 KVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLI 539

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS-GI 435
             Y   G  + A ++F  M  +GI  +  +   +L  Y K    E+ ++  + ME   G+
Sbjct: 540 KAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQYGV 599

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D   Y A+       G++    +  ++M+    +P+ + Y+TLI++Y   G   +AMQ
Sbjct: 600 EPDKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMYEANGQIDKAMQ 659

Query: 496 IFREFKQAGL 505
           +        L
Sbjct: 660 VLERMGSGSL 669



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 85/398 (21%), Positives = 169/398 (42%), Gaps = 35/398 (8%)

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G+  D+ + N ++  + +      A ++     +  + PN    +T+I       RL  A
Sbjct: 177 GLRVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRRLSQA 236

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           L +F  M+  GI     ++N ++    +    + A+ + +EME  GI  D +T+  L+  
Sbjct: 237 LKLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSA 296

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
               G +D  +   + M+A   S  L  Y  +    ++    +EA  +F+   + G +  
Sbjct: 297 TTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGYELK 356

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
           +  Y+AL+ A  +    E A+     +  +G+ P+V++++S+I A   +   E  ++ +E
Sbjct: 357 LESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLE 416

Query: 569 RDLGKQKESANLDAMCS-----QDDKDVQEA----------GRTDNQIIKVFGQLVAEKA 613
           R +       N+ + C      Q   + ++A          G   N++         EK 
Sbjct: 417 R-MKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKG 475

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR- 672
            Q KK          +L   +K+ +L +K +VV +S  ++A ++   +E A    +++  
Sbjct: 476 RQWKK----------VLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTK 525

Query: 673 --LFDNQVYGVAHGLLMGYRD-NIWVQALSLFDEVKLM 707
                N V      L+  Y D  +W +A S+F   KLM
Sbjct: 526 SGCLPNIV--TYSSLIKAYGDVGLWEKAESVF---KLM 558



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 138/290 (47%), Gaps = 22/290 (7%)

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           V K +  +G+R D  + N ++   G+   +    ++F   ++  V PN    +TLI    
Sbjct: 169 VMKIVNETGLRVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALG 228

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
            G    +A+++FR  ++AG++  +  ++AL+ A  +    ++AV L +EM K GI P+ +
Sbjct: 229 CGRRLSQALKLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRI 288

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
           T+  ++     SATT   + D  +      ++    ++   +  ++Q A     +  + +
Sbjct: 289 TFTGLV-----SATTAAGLWDRAQSFIDMMQARGF-SIGLHEYIEMQWACARARKPREAY 342

Query: 606 G--QLVAEKAGQGKKENRCRQEILC----------ILGVFQKMHKLKIKPNVVTFSAILN 653
           G  Q++ E+  + K E+     +LC           +  F  +    + P+V+++S++++
Sbjct: 343 GLFQVMLEQGYELKLES--YNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLIS 400

Query: 654 ACSRCNSFEDASMLLEELRLFDNQVYGVAH-GLLMGY-RDNIWVQALSLF 701
           AC+     E A  +LE ++  D Q   V+  GLL  Y +   W +A  +F
Sbjct: 401 ACANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIF 450


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 188/370 (50%), Gaps = 4/370 (1%)

Query: 192 QGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF 251
           + KL + ++  L RLG++  A+N+F+   + G   TV +F+ +IS   R+G    A ++ 
Sbjct: 115 EAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLH 174

Query: 252 NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
             M    + P++ TY A+I    + G   +    +F+ M   G++P+ + F  L+    +
Sbjct: 175 RRMSEAGVTPDVYTYGALIQGLCRVG-RIEDARGVFEKMCGRGMKPNAVVFTILIDAHCK 233

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            G  E    L  EM  RG+  D  TYN +++ +C+   +  A  I+ EM +  + P+ VT
Sbjct: 234 KGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 293

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+T+IDGY K   LD A+ +   M   G+GLD V+Y  ++S  +K GR  +A  V  EM 
Sbjct: 294 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 353

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
            +G+  D  TY  ++  + ++G      R+ ++M+     P ++TY+ +++ + K G  K
Sbjct: 354 EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMK 413

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            A  +       G+  D + Y+ L+D  CK+G V     L    + +G  P++  Y SI+
Sbjct: 414 NADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL---KSAKGTVPDLGVYTSIV 470

Query: 552 DAFGRSATTE 561
               +  TT+
Sbjct: 471 GEIVKKKTTK 480



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 164/309 (53%), Gaps = 1/309 (0%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           EA + +  +    L P    +N ++    + G +      +FD+M   GV+   ++FN++
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLG-ELASAQNVFDEMQSRGVRRTVVSFNTM 157

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           ++   R G  + A  L   M   G+  D++TY  L+  +C+  +++ A  +  +M  + +
Sbjct: 158 ISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGM 217

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            PN V ++ +ID + K G  +  L +  EM+  G+  D V+YN +++   +    + A  
Sbjct: 218 KPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASG 277

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           +  EM S+G+R D VTY  L+ GY K+ + D    + + M A+ V  + +TY+ LI   S
Sbjct: 278 IVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLS 337

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G   +A ++  E  +AGL+ D   Y+ +IDA C+ G V++ + LL EM  +G +P VV
Sbjct: 338 KAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVV 397

Query: 546 TYNSIIDAF 554
           TYN I++ F
Sbjct: 398 TYNVIMNGF 406



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 170/334 (50%), Gaps = 1/334 (0%)

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
           L+ G       F+ L+    R G    A +VF+ M+   ++  +V++N +I    + G D
Sbjct: 108 LDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG-D 166

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
                 +   M   GV PD  T+ +L+    R G  E AR +F +M  RG+  +   +  
Sbjct: 167 LDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTI 226

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+DA CK    +   E+  EM  + + P+ VTY+ +++G  +A  L  A  +  EM+  G
Sbjct: 227 LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 286

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           +  D V+Y T++  Y K    + A+ + + M + G+  D VTY AL+ G  K G+  +  
Sbjct: 287 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAE 346

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           R+  +M    + P+  TY+ +ID + + G  K  +++ +E +  G K  VV Y+ +++  
Sbjct: 347 RVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGF 406

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           CK G +++A  LL+ M   G+ P+ +TYN ++D 
Sbjct: 407 CKLGQMKNADMLLNAMINIGVSPDDITYNILLDG 440



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 151/290 (52%), Gaps = 7/290 (2%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           +L  G+ P+   FN L+    R G   +A+N+F+EM  RG+ + + ++NT++  +C+   
Sbjct: 107 LLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGD 166

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A  +   M    ++P+V TY  +I G  + GR++DA  +F +M   G+  + V +  
Sbjct: 167 LDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTI 226

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++  + K G  E  L + +EM   G+R DAVTYNA++ G  +         +  +M++  
Sbjct: 227 LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 286

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + P+ +TY+TLID Y K      AM+I +     G+  D V Y+ALI  L K G    A 
Sbjct: 287 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAE 346

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
            +L EM + G+ P+  TY  +IDAF       C   DV+  L   KE  N
Sbjct: 347 RVLGEMMEAGLEPDNTTYTMVIDAF-------CRKGDVKTGLRLLKEMQN 389



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 167/317 (52%), Gaps = 16/317 (5%)

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           + P    ++ ++    + G L  A N+F EM+  G+    VS+NT++S   + G  + A 
Sbjct: 112 LPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAE 171

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            + + M  +G+  D  TY AL+ G  + G+ ++ R +FE+M    + PN + ++ LID +
Sbjct: 172 TLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAH 231

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            K G  +  +++ RE ++ G++ D V Y+A+++ LC+   ++SA  ++ EM   G+RP+ 
Sbjct: 232 CKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDT 291

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC-SQDDKDVQEAGRTDNQIIK 603
           VTY ++ID + +    +  ++ +++++    E   LD +  +     + +AGR+ +   +
Sbjct: 292 VTYTTLIDGYCKEEELDMAME-IKQNM--VAEGVGLDEVTYTALISGLSKAGRSADAE-R 347

Query: 604 VFGQLVAEKAGQGKKENR--------CRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNA 654
           V G+++  +AG               CR+ ++   L + ++M     KP VVT++ I+N 
Sbjct: 348 VLGEMM--EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNG 405

Query: 655 CSRCNSFEDASMLLEEL 671
             +    ++A MLL  +
Sbjct: 406 FCKLGQMKNADMLLNAM 422



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 75/297 (25%)

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK---EMESSGI 435
           YA+ G L DA  +       GI L+  S   ++S      RF  A   C    ++  +G+
Sbjct: 59  YAEEGLLPDACTLVLLALRRGIRLEPTSCTGLMS------RFPTAPEACAFYLQLLDAGL 112

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +A  +N L+    + G+    + +F++M++  V   +++++T+I    + G    A  
Sbjct: 113 PPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAET 172

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           + R   +AG+  DV  Y ALI  LC+ G +E A  + ++M   G++PN V +  +I    
Sbjct: 173 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILI---- 228

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
                                    DA C + D +                         
Sbjct: 229 -------------------------DAHCKKGDAET------------------------ 239

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                        +L + ++M +  ++P+ VT++AI+N   R    + AS ++ E+R
Sbjct: 240 -------------MLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 283


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 189/358 (52%), Gaps = 7/358 (1%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           IS L + GK+D    + E     G    V  F ++IS   ++    +A  VF  M     
Sbjct: 194 ISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGC 253

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDM--LRNGVQPDRITFNSLLAVCSRGGLWEA 317
            P+ +TY+ ++D   +       V E+ + M  ++ G   +  T N+ +    R G +  
Sbjct: 254 VPDSLTYSIMLDNLSRAN-RLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPL 312

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-PAKNISPNVVTYSTMI 376
           A+N+   M+  G   ++ +YN ++D +CK   +D A+++  +M  +    P+V+ ++T+I
Sbjct: 313 AKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLI 372

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGL-DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
            G+ KAGRL  A  +  EMK   I + D V+YNT++   +K G  ++A L+ +EM++ G 
Sbjct: 373 SGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGC 432

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + + VTY AL+ GY K G Y+E   +F++M A    P+++TY+T++  +SK G+  +A  
Sbjct: 433 KPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEG 492

Query: 496 IFREFKQ--AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           ++++ K   +    D + Y  LID  C+    E  ++LL EMT  G   +  TYN +I
Sbjct: 493 VYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLI 550



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 154/606 (25%), Positives = 267/606 (44%), Gaps = 91/606 (15%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L + G +D A+ + +   + G    V  ++ALI    ++    +AI     M R
Sbjct: 14  TTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLR 73

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              +P+LVTYN++I   C    +D   +V    +++RNG  P+ IT+++L+    R    
Sbjct: 74  SGCEPDLVTYNSLIHGLCMANRMDDAGLV--LQELVRNGFAPNHITYSTLVIWNCRRRRL 131

Query: 316 EAARNLFNEMVHRG--------ID-----------------------------QDIFTYN 338
           + AR L  EM+ RG        ID                              D+ TYN
Sbjct: 132 DQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYN 191

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           T +  +CK  ++D   E++ EM    I P+VVT+ ++I G  KA R+DDA  +F  M   
Sbjct: 192 TFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLER 251

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES--SGIRKDAVTYNALLGGYGKQGKYD 456
           G   D ++Y+ +L   ++  R +    V + M++  +G   +  T+NA +G   + GK+ 
Sbjct: 252 GCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFP 311

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG-LKADVVLYSAL 515
             + +   M      PNLL+Y+ +ID   K G   +A ++ R+   +G  K DV+ ++ L
Sbjct: 312 LAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTL 371

Query: 516 IDALCKNGLVESAVSLLDEMTKEGI-RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           I   CK G +  A  LL EM  + I  P+VVTYN++ID               +   G  
Sbjct: 372 ISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDG--------------QSKFGSL 417

Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
           K++  L        +++Q  G   N  +  +  L+   A  G  E            +F 
Sbjct: 418 KQAKLL-------LQEMQAVGCKPN--VVTYAALINGYAKHGMYEEA--------ESLFD 460

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVY----GVAHGLLM-GY 689
           +M      P+++T++ +L+A S+      A  + ++L+  +   Y     + + +L+ GY
Sbjct: 461 EMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLK--NKTSYCSPDAITYRILIDGY 518

Query: 690 -RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENV 748
            R     Q L+L  E+     S  S  YN L   L        A+   +  K   V++ +
Sbjct: 519 CRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKL--------AETEEVPSKALAVYQQM 570

Query: 749 WSESCL 754
             + C+
Sbjct: 571 LDQDCV 576



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 211/443 (47%), Gaps = 48/443 (10%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           YT L+  L        AIQ     VKR  R   +  L +  ++I  L    ++D A  + 
Sbjct: 48  YTALIDGLCKARRPHDAIQ----TVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVL 103

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY-NAVIDACGK 275
           +  +  G+      +S L+    R     +A  +   M       NLV Y + +   C  
Sbjct: 104 QELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEA 163

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
                ++     D+M+ +G  PD +T+N+ ++   + G  +    +  EM   GI  D+ 
Sbjct: 164 RCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVV 223

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           T+ +++  +CK  ++D AF++   M  +   P+ +TYS M+D  ++A RLD    +   M
Sbjct: 224 TFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHM 283

Query: 396 K---------------FLG---------------IGL-------DRVSYNTVLSIYAKLG 418
           +               F+G               +G+       + +SYN V+    K G
Sbjct: 284 QAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSG 343

Query: 419 RFEEALLVCKEMESSGIRK-DAVTYNALLGGYGKQGKYDEVRRMFEQMKAD--CVSPNLL 475
             ++A  + ++M  SG  K D + +N L+ G+ K G+  +  ++  +MKA   CV P+++
Sbjct: 344 NVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICV-PDVV 402

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY+TLID  SK G  K+A  + +E +  G K +VV Y+ALI+   K+G+ E A SL DEM
Sbjct: 403 TYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEM 462

Query: 536 TKEGIRPNVVTYNSIIDAFGRSA 558
           + +G  P+++TYN+++ AF ++ 
Sbjct: 463 SAKGCFPDIITYNTVLSAFSKAG 485



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 124/525 (23%), Positives = 225/525 (42%), Gaps = 87/525 (16%)

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G D  + TY TL+D +CK   +D A  ++ +M     +PNVVTY+ +IDG  KA R
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
             DA+     M   G   D V+YN+++       R ++A LV +E+  +G   + +TY+ 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 445 LLGGYGKQGKYDEVRRMFEQM--------------------KADCVS------------- 471
           L+    ++ + D+ R +  +M                    +A C S             
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 472 ----PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
               P+++TY+T I    K G   + +++  E  + G+  DVV + ++I  LCK   ++ 
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK---------ESA 578
           A  +   M + G  P+ +TY+ ++D   R+   + TVD+V   +   K          +A
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLD-TVDEVLEHMQAMKAGCVMEVYTHNA 299

Query: 579 NLDAMCSQDD----KDVQ----EAGRTDNQIIKVF---GQLVAEKAGQGKKENR------ 621
            + A+C        K++     E+G   N +   F   G   +       K +R      
Sbjct: 300 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 359

Query: 622 -CRQEIL---------CILGVFQKMHKLKIK--------PNVVTFSAILNACSRCNSFED 663
            C+ +++         C  G   + H+L I+        P+VVT++ +++  S+  S + 
Sbjct: 360 CCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQ 419

Query: 664 ASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
           A +LL+E++    +   V +  L+ GY +  ++ +A SLFDE+           YN +  
Sbjct: 420 AKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLS 479

Query: 722 MLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARA 766
                G    A+ V  + K +  +    S   +   ++  G  RA
Sbjct: 480 AFSKAGMMSKAEGVYQQLKNKTSY---CSPDAITYRILIDGYCRA 521



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 137/275 (49%), Gaps = 12/275 (4%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGN-TVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           +I  L + G VD A  +    L+ G     V  F+ LIS + ++G   +A  +   MK  
Sbjct: 335 VIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAK 394

Query: 258 NL-KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           N+  P++VTYN +ID   K G   K    +  +M   G +P+ +T+ +L+   ++ G++E
Sbjct: 395 NICVPDVVTYNTLIDGQSKFG-SLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYE 453

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN--ISPNVVTYST 374
            A +LF+EM  +G   DI TYNT+L A  K   M  A  +  ++  K    SP+ +TY  
Sbjct: 454 EAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRI 513

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE----ALLVCKEM 430
           +IDGY +A   +  L +  EM   G   D  +YN ++   AKL   EE    AL V ++M
Sbjct: 514 LIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLI---AKLAETEEVPSKALAVYQQM 570

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
                   A  +N+L+  + + G  +  R M ++M
Sbjct: 571 LDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEM 605


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 217/468 (46%), Gaps = 47/468 (10%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
           T + F     A  R G   EA+++   M R+   P+ V Y  VI A C +GGV       
Sbjct: 158 TTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGV--TEAAT 215

Query: 286 IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           + ++ML  G   D  TF+ ++  +C  G + EAAR L + M+ +G    + TY  LL  +
Sbjct: 216 LLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAAR-LVDRMMTKGCMPGVMTYGFLLQGL 274

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C+  Q D A  ++  +P  N    VV ++T+I G    G+L +A  ++  M   G   D 
Sbjct: 275 CRVRQADEARAMLGRVPELN----VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 330

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +Y+ ++    KLGR   A+ + +EME  G   + VTY  +L  + K G +D+ R + E+
Sbjct: 331 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 390

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M A  ++ N   Y+ +I    K G   EAM + +E +  G   D+  Y+ +I  LC N  
Sbjct: 391 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 450

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE-------------CTVDDVERDL 571
           +E A  + + + +EG+  N +TYN+II A  R    +             C++D V  + 
Sbjct: 451 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYN- 509

Query: 572 GKQKESANLDAMCSQDDKD--------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
                   + AMC   + D        + E G   N +   +  L++E      KE R R
Sbjct: 510 ------GLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNV--SYNILISELC----KERRVR 557

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                 L + ++M    + P++VT++ ++N   +      A  LLE+L
Sbjct: 558 DA----LELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 601



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 221/498 (44%), Gaps = 65/498 (13%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L RLG+ D A  +       G       +  +I A    G   EA ++ N M       +
Sbjct: 169 LCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAAD 228

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRIT-------------------- 301
           + T++ V+   CG G V  +    + D M+  G  P  +T                    
Sbjct: 229 VNTFDDVVRGMCGLGRV--REAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAM 286

Query: 302 -----------FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
                      FN+++  C   G    A  L+  M  +G   D  TY+ L+  +CK  ++
Sbjct: 287 LGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRI 346

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
             A  ++ EM  K  +PNVVTY+ ++  + K G  DD   +  EM   G+ L+   YN +
Sbjct: 347 GSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 406

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +    K GR +EA+ + +EM S G   D  +YN ++       + +E   MFE +  + V
Sbjct: 407 IYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 466

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
             N +TY+T+I    + G +++A+++ +E    G   DVV Y+ LI A+CK+G V+ ++ 
Sbjct: 467 VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLV 526

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
           LL+EM ++GI+PN V+YN +I    +    E  V D   +L KQ  +  L         D
Sbjct: 527 LLEEMAEKGIKPNNVSYNILISELCK----ERRVRDA-LELSKQMLNQGLA-------PD 574

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
           +       N + K+     A                   L + +K+H   + P+++T++ 
Sbjct: 575 IVTYNTLINGLCKMGWMHAA-------------------LNLLEKLHNENVHPDIITYNI 615

Query: 651 ILNACSRCNSFEDASMLL 668
           +++   +    +DA+MLL
Sbjct: 616 LISWHCKVRLLDDAAMLL 633



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 216/445 (48%), Gaps = 27/445 (6%)

Query: 120 RHSVVAEEALHHVTAFARDD----VSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWS 173
           RH  V +  L+     A  D         +L +     C AD  TF  ++R +   G   
Sbjct: 187 RHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVR 246

Query: 174 KAIQCFAFAVKREERKNDQGKLASAM-----ISILGRLGKVDLAKNIFETA--LNEGYGN 226
           +A +         +R   +G +   M     +  L R+ + D A+ +      LN     
Sbjct: 247 EAARLV-------DRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN----- 294

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
            V  F+ +I      G   EA  ++ +M     +P+  TY+ ++    K G      V +
Sbjct: 295 -VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG-RIGSAVRL 352

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             +M + G  P+ +T+  +L    + G+W+  R L  EM  +G+  +   YN ++ A+CK
Sbjct: 353 LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCK 412

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +MD A  ++ EM ++  +P++ +Y+T+I       ++++A +MF  +   G+  + ++
Sbjct: 413 DGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGIT 472

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNT++    + GR+++A+ + KEM   G   D V+YN L+    K G  D    + E+M 
Sbjct: 473 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 532

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + PN ++Y+ LI    K    ++A+++ ++    GL  D+V Y+ LI+ LCK G + 
Sbjct: 533 EKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMH 592

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSII 551
           +A++LL+++  E + P+++TYN +I
Sbjct: 593 AALNLLEKLHNENVHPDIITYNILI 617



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 165/328 (50%), Gaps = 1/328 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A  ++ET   +G     + +S L+    + G    A+ +   M++    PN+VTY
Sbjct: 309 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTY 368

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
             V+ +  K G+ +     + ++M   G+  +   +N ++    + G  + A  L  EM 
Sbjct: 369 TIVLHSFCKNGM-WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMR 427

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +G + DI +YNT++  +C   QM+ A  +   +  + +  N +TY+T+I    + GR  
Sbjct: 428 SQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQ 487

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           DA+ +  EM   G  LD VSYN ++    K G  + +L++ +EM   GI+ + V+YN L+
Sbjct: 488 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI 547

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
               K+ +  +   + +QM    ++P+++TY+TLI+   K G    A+ +  +     + 
Sbjct: 548 SELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVH 607

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDE 534
            D++ Y+ LI   CK  L++ A  LL+ 
Sbjct: 608 PDIITYNILISWHCKVRLLDDAAMLLNR 635



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 185/442 (41%), Gaps = 58/442 (13%)

Query: 310 SRGGLWEAAR-NLFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
           S+GGL  A R  L+  MVHR  +    FT+     A+C+  + D A  ++  M      P
Sbjct: 133 SQGGLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVP 192

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           + V Y T+I      G + +A  + +EM  +G   D  +++ V+     LGR  EA  + 
Sbjct: 193 DAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLV 252

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
             M + G     +TY  LL G  +  + DE R M  ++       N++ ++T+I      
Sbjct: 253 DRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVP----ELNVVLFNTVIGGCLAE 308

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G   EA +++      G + D   YS L+  LCK G + SAV LL EM K+G  PNVVTY
Sbjct: 309 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTY 368

Query: 548 NSIIDAFGRSATTECTVDDVER------DLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
             ++ +F ++   + T   +E        L  Q  +  + A+C    KD    GR D   
Sbjct: 369 TIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC----KD----GRMDEA- 419

Query: 602 IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
                                       +G+ Q+M      P++ +++ I+         
Sbjct: 420 ----------------------------MGLIQEMRSQGCNPDICSYNTIIYHLCNNEQM 451

Query: 662 EDASM----LLEELRLFDNQVYG-VAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFY 716
           E+A      LLEE  + +   Y  + H LL   RD  W  A+ L  E+ L   S     Y
Sbjct: 452 EEAEHMFENLLEEGVVANGITYNTIIHALL---RDGRWQDAVRLAKEMILHGCSLDVVSY 508

Query: 717 NALTDMLWHFGQKRGAQLVVLE 738
           N L   +   G      LV+LE
Sbjct: 509 NGLIKAMCKDGNV-DRSLVLLE 529



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 171/373 (45%), Gaps = 18/373 (4%)

Query: 144 DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           ++ +    K C  D +T+  L+  L   G    A++      +  E+K     + +  I 
Sbjct: 316 ELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL----REMEKKGFAPNVVTYTIV 371

Query: 202 I--LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           +    + G  D  + + E    +G       ++ +I A  + G   EA+ +   M+    
Sbjct: 372 LHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGC 431

Query: 260 KPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            P++ +YN +I   C       +    +F+++L  GV  + IT+N+++    R G W+ A
Sbjct: 432 NPDICSYNTIIYHLCNN--EQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDA 489

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L  EM+  G   D+ +YN L+ A+CK   +D +  ++ EM  K I PN V+Y+ +I  
Sbjct: 490 VRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISE 549

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K  R+ DAL +  +M   G+  D V+YNT+++   K+G    AL + +++ +  +  D
Sbjct: 550 LCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 609

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQ-MKADCVSPNLLTYSTLID------VYSKGGLYK 491
            +TYN L+  + K    D+   +  + M A C   +      L D      +++KG  ++
Sbjct: 610 IITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPDKNFKLYLHTKGDDFQ 669

Query: 492 EAMQIFREFKQAG 504
            ++   +    AG
Sbjct: 670 HSLGCVKPSCPAG 682


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 208/404 (51%), Gaps = 11/404 (2%)

Query: 150 EFKLCG--ADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISIL 203
           E K CG   D YT+  L+     +G+  K +    + ++  +  N +  L S  ++   L
Sbjct: 350 EMKSCGISPDVYTYSILIHGFCKQGDVEKGL----YLIEEMKYSNMEPSLVSYSSLFHGL 405

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
            +    D++ +IF      GY     A+S LI  +   G    A  +   M R NL P+ 
Sbjct: 406 CKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDP 465

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
             + +++    K G+ + + +E F+ ML  G+ P   T N ++    R G  E A NL N
Sbjct: 466 SNFESLVHGFCKMGL-WVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMN 524

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EM  +GI  ++FTYN +++ +CK  + + A E+   M  +N+ P+VV YST+IDG+AK  
Sbjct: 525 EMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQS 584

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
               AL +++ M  +G+  D V+Y  +++I     R  EA  + K+M  +G+  D ++Y 
Sbjct: 585 NSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYT 644

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           +++ G+ + G   +   +F +M      P ++TY++L+D Y K      A  +  E K+ 
Sbjct: 645 SVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRK 704

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G+  DVV Y+ LI A  + G ++ A+ +L+EM + G+ P+ +TY
Sbjct: 705 GITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTY 748



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 198/396 (50%), Gaps = 38/396 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I  L + G++D A  + E   + G    VY +S LI  + + G  ++ + +   MK 
Sbjct: 329 NAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKY 388

Query: 257 YNLKPNLVTYNAVIDA------------------------------------CGKGGVDF 280
            N++P+LV+Y+++                                       C +G +D 
Sbjct: 389 SNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDS 448

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
            H  ++ ++M+RN + PD   F SL+    + GLW  A   FN M+  GI   I T N +
Sbjct: 449 AH--KLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVI 506

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +DA C+  +++ A  +M EM  + I PN+ TY+ +I+   K  + + AL +F  M    +
Sbjct: 507 IDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNV 566

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
               V Y+T++  +AK    ++AL++   M   G+  D V Y  L+     + +  E   
Sbjct: 567 LPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYN 626

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F++M  + ++P+ ++Y+++I  + + G  ++A  +F E  Q G    VV Y++L+D  C
Sbjct: 627 LFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYC 686

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           K   ++ A  L+DEM ++GI P+VVTYN +I A  R
Sbjct: 687 KMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRR 722



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 123/516 (23%), Positives = 246/516 (47%), Gaps = 44/516 (8%)

Query: 249 SVFNSMKRYNLKPNLVTYNAVIDACGKGG-----VDFKHVVEIFDDMLRNGVQPDRITFN 303
           S+F  MK     PN+ TY  +++   KG      +D +   EI ++M RNG  P  +T++
Sbjct: 235 SLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYS 294

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
           + +    R G  E+A +    ++      +++ YN ++  +CK  ++D A +++ EM + 
Sbjct: 295 TYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSC 354

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
            ISP+V TYS +I G+ K G ++  L +  EMK+  +    VSY+++     K    + +
Sbjct: 355 GISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDIS 414

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
           L + +++ ++G + D   Y+ L+ G+  QG  D   ++ E+M  + ++P+   + +L+  
Sbjct: 415 LDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHG 474

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           + K GL+  A++ F    + G+   +   + +IDA C+ G VE A++L++EM  +GI PN
Sbjct: 475 FCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPN 534

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           + TYN++I+                R   ++K    L+       ++V  +       + 
Sbjct: 535 LFTYNAVIN----------------RLCKERKSERALELFPLMLKRNVLPS-------VV 571

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA-CSR---CN 659
           V+  L+   A Q   +          L ++ +M K+ + P++V ++ ++N  C R   C 
Sbjct: 572 VYSTLIDGFAKQSNSQKA--------LMLYARMLKIGVTPDMVAYTILINILCHRSRMCE 623

Query: 660 SFEDASMLLEELRLFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNA 718
           ++     + E     D   Y     ++ G+ R     +A +LF+E+           Y +
Sbjct: 624 AYNLFKKMTENGMTPDKISYT---SVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTS 680

Query: 719 LTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
           L D      +   A +++ E KR+ +  +V + + L
Sbjct: 681 LVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVL 716



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 198/392 (50%), Gaps = 3/392 (0%)

Query: 167 GNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILG--RLGKVDLAKNIFETALNEGY 224
           GN GE     +     ++  ER  +   + +    I G  R+G V+ A +   + ++   
Sbjct: 262 GNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANG 321

Query: 225 GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVV 284
              VY ++A+I    + G   EA+ V   MK   + P++ TY+ +I    K G D +  +
Sbjct: 322 LVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQG-DVEKGL 380

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
            + ++M  + ++P  ++++SL     +  L + + ++F ++   G   D   Y+ L+   
Sbjct: 381 YLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGF 440

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C    +D A ++M EM   N++P+   + +++ G+ K G   +AL  F+ M   GI    
Sbjct: 441 CMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSI 500

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            + N ++  + + GR EEAL +  EM++ GI  +  TYNA++    K+ K +    +F  
Sbjct: 501 ATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPL 560

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    V P+++ YSTLID ++K    ++A+ ++    + G+  D+V Y+ LI+ LC    
Sbjct: 561 MLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSR 620

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           +  A +L  +MT+ G+ P+ ++Y S+I  F R
Sbjct: 621 MCEAYNLFKKMTENGMTPDKISYTSVIAGFCR 652



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 113/515 (21%), Positives = 210/515 (40%), Gaps = 88/515 (17%)

Query: 182 AVKREERKNDQGKLASAMISILGRLGKVDLAKNI-FETALNE-GYGNTVYAFSALISAYG 239
            +KR  R + +  L+  ++ +   L   ++A++I F T + + G+  ++ AF  +++   
Sbjct: 77  VMKRRSRIHRKHVLSPVVVKVFKSLNW-EVARHIKFSTTMKKYGFSRSIDAFRTVVNVLA 135

Query: 240 RSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDR 299
            +G   E  ++   +  Y  K NL  +                  E+F  +L +     R
Sbjct: 136 LAGMHMEVYALLRDIVCYYNKVNLDAF------------------ELFPILLESPKDAAR 177

Query: 300 --ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
             I F+ L+ V +   + E A ++F +    G++    + N LL  + +  + +    + 
Sbjct: 178 SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLF 237

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKA--GRLD----DALNMFSEMKFLGIGLDRVSYNTVL 411
            EM +    PNV TY+ M++ Y K   G  D     A  +  EM+  G     V+Y+T +
Sbjct: 238 EEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYI 297

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
               ++G  E AL   + + S+    +   YNA++ G  K+G+ D               
Sbjct: 298 YGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELD--------------- 342

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
                               EA+++  E K  G+  DV  YS LI   CK G VE  + L
Sbjct: 343 --------------------EALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYL 382

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG-------KQKESANLDAMC 584
           ++EM    + P++V+Y+S+     +   ++ ++ D+ RDLG       +   S  +   C
Sbjct: 383 IEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISL-DIFRDLGAAGYKYDQTAYSILIKGFC 441

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV-------FQKMH 637
            Q D D            K+  ++V                  C +G+       F  M 
Sbjct: 442 MQGDLDSAH---------KLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMML 492

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           +  I P++ T + I++A  R    E+A  L+ E++
Sbjct: 493 EGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQ 527


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/545 (25%), Positives = 256/545 (46%), Gaps = 31/545 (5%)

Query: 142 LGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           L ++ + F F    A  +  LLR   + G+ S A+  F    K   R + +    + +++
Sbjct: 137 LAEVYRDFTFS---AVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRS--CNRLLN 191

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            L + G   +A  ++      G     +  + +  AY R G   +A+     M+   L+ 
Sbjct: 192 KLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEV 251

Query: 262 NLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           NLV Y+AV+D  CG G  +      I + + R G+ P+ +T+  L+    + G  E A  
Sbjct: 252 NLVAYHAVMDCYCGMGWTE--DARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAER 309

Query: 321 LFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           +  EM   G I  D   Y  +++  C+  +MD A  +  EM    I  N+  Y+TMI+G 
Sbjct: 310 VVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGL 369

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K GR+++   +  EM+ +G+  D+ SYNT++  Y + G   +A  +C+ M  +G+    
Sbjct: 370 CKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATT 429

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           +TYN LL G+      D+  R++  M    V+PN ++ STL+D   K G  ++A+ +++E
Sbjct: 430 LTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKE 489

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GR 556
               GL  +V+ ++ +I+ LCK G +  A  LLD M +    P+ +TY ++ D +   G+
Sbjct: 490 TLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQ 549

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQ----------DDKDVQEAGRTDNQIIKVFG 606
             T    ++ +E  LG        ++  +           +D   + + R  +  +  +G
Sbjct: 550 LGTATHLMNKMEH-LGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYG 608

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            L+A    +G     C         ++ +M    + PNV   SA+++   +    ++A++
Sbjct: 609 ALIAGWCKEGNLHEAC--------NLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660

Query: 667 LLEEL 671
           +L++L
Sbjct: 661 VLQKL 665



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 124/516 (24%), Positives = 233/516 (45%), Gaps = 52/516 (10%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           A+  +I+ Y + G   +A  V N M+   +  NL  YN +I+   K G   + V ++  +
Sbjct: 326 AYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLG-RMEEVQKVLQE 384

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G++PD+ ++N+L+    R G    A  +   MV  G+     TYNTLL   C    
Sbjct: 385 MEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHA 444

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A  +   M  + ++PN ++ ST++DG  KAG+ + ALN++ E    G+  + +++NT
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT 504

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           V++   K+GR  EA  +   M+      D++TY  L  GY K G+      +  +M+   
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            +P++  +++ I  +     + +   I  E    GL  ++V Y ALI   CK G +  A 
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEAC 624

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM--CSQD 587
           +L  EM   G+ PNV   ++++  F +    E  VD+    L K     N+D +  CS  
Sbjct: 625 NLYFEMVNNGMNPNVFICSALMSCFYK----EGKVDEANLVLQKL---VNIDMIPGCSIS 677

Query: 588 DKDVQEAGRTDNQI-------------IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
             ++ +     + I             + +FG   + +    K              +F+
Sbjct: 678 TIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKS-------------LFE 724

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDA---------SMLLEELRLFDNQVYGVAHGL 685
            +   +  P+  T+S++++ C+   S ++A         + L   +  +++ +YG+    
Sbjct: 725 SLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLC--- 781

Query: 686 LMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
               +     +A++LF++++    S     YN L D
Sbjct: 782 ----KSGKLSRAVNLFNKLQSKGISPNGITYNTLID 813



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 131/574 (22%), Positives = 242/574 (42%), Gaps = 149/574 (25%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI+ L +LG+++  + + +   + G     Y+++ LI  Y R G  ++A  +   M R
Sbjct: 363 NTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVR 422

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             L    +TYN ++   C    +D    + ++  ML+ GV P+ I+ ++LL    + G  
Sbjct: 423 NGLAATTLTYNTLLKGFCSLHAID--DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480

Query: 316 EAARNLFNEMVHRGIDQDIFTYNT-----------------------------------L 340
           E A NL+ E + RG+ +++ T+NT                                   L
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540

Query: 341 LDAICKGAQMDLAFEIM-----------------------------------AEMPAKNI 365
            D  CK  Q+  A  +M                                   +EM A+ +
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL 600

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           SPN+VTY  +I G+ K G L +A N++ EM   G+  +    + ++S + K G+ +EA L
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660

Query: 426 VCKEMES---------SGIRKDAVT-----------------YNALLGGYGKQGKYDEVR 459
           V +++ +         S I  D ++                 +N ++ G  K G+  + +
Sbjct: 661 VLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK 720

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +FE ++     P+  TYS+LI   +  G   EA  +      AGL  +++ Y++LI  L
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL 780

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
           CK+G +  AV+L +++  +GI PN +TYN++ID + +               GK  E+  
Sbjct: 781 CKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKE--------------GKTTEAFK 826

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
           L        + + E G  + + IK+  Q++         EN                   
Sbjct: 827 LK-------QKMVEEGYME-EAIKLLDQMI---------EN------------------- 850

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
            + PN +T+  +++   +  + E+ S L +E+ +
Sbjct: 851 NVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHI 884



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/461 (23%), Positives = 200/461 (43%), Gaps = 80/461 (17%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL+   +      A++ +   +KR    N+     S ++  L + GK + A N+++ 
Sbjct: 432 YNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS--CSTLLDGLFKAGKTEQALNLWKE 489

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG- 277
            L  G    V  F+ +I+   + G   EA  + + MK     P+ +TY  + D   K G 
Sbjct: 490 TLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQ 549

Query: 278 -------------VDFKHVVEIFD--------------------DMLRNGVQPDRITFNS 304
                        + F   VE+F+                    +M   G+ P+ +T+ +
Sbjct: 550 LGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGA 609

Query: 305 LLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
           L+A  C  G L EA  NL+ EMV+ G++ ++F  + L+    K  ++D A  ++ ++   
Sbjct: 610 LIAGWCKEGNLHEAC-NLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNI 668

Query: 364 NISPNV--------------------------VTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           ++ P                            V ++ +I G  K+GR+ DA ++F  ++ 
Sbjct: 669 DMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRN 728

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
                D  +Y++++   A  G  +EA  +   M S+G+  + +TYN+L+ G  K GK   
Sbjct: 729 KRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSR 788

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG------------- 504
              +F ++++  +SPN +TY+TLID Y K G   EA ++ ++  + G             
Sbjct: 789 AVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMI 848

Query: 505 ---LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
              +  + + Y  LI    K+G +E    L DEM   G+ P
Sbjct: 849 ENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 889



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 56/270 (20%), Positives = 114/270 (42%), Gaps = 38/270 (14%)

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
           L+    +++R+F  + +  D++L  A  DA    G + SA+++ D M K G RP++ + N
Sbjct: 133 LFPHLAEVYRDFTFSAVSFDLLL-RAHADA----GQLSSALNVFDGMGKVGCRPSLRSCN 187

Query: 549 SIIDAFGRSAT--TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG 606
            +++   +S        V    R  G   +   +  M     +D    GR    +     
Sbjct: 188 RLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRD----GRVAQAV----- 238

Query: 607 QLVAEKAGQGKKEN----RCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNAC 655
           + V E  G G + N        +  C +G       + + + +  + PNVVT++ ++   
Sbjct: 239 EFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGY 298

Query: 656 SRCNSFEDASMLLEELR-LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASA 714
            +    E+A  +++E++   D  V  VA+G+++    N + Q   + D  ++ +    + 
Sbjct: 299 CKDGRMEEAERVVKEMKETGDIVVDEVAYGMMI----NGYCQRGRMDDATRVRNEMRDAG 354

Query: 715 F------YNALTDMLWHFGQKRGAQLVVLE 738
                  YN + + L   G+    Q V+ E
Sbjct: 355 IHVNLFVYNTMINGLCKLGRMEEVQKVLQE 384


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 217/468 (46%), Gaps = 47/468 (10%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
           T + F     A  R G   EA+++   M R+   P+ V Y  VI A C +GGV       
Sbjct: 174 TTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGV--TEAAT 231

Query: 286 IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           + ++ML  G   D  TF+ ++  +C  G + EAAR L + M+ +G    + TY  LL  +
Sbjct: 232 LLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAAR-LVDRMMTKGCMPGVMTYGFLLQGL 290

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C+  Q D A  ++  +P  N    VV ++T+I G    G+L +A  ++  M   G   D 
Sbjct: 291 CRVRQADEARAMLGRVPELN----VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 346

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +Y+ ++    KLGR   A+ + +EME  G   + VTY  +L  + K G +D+ R + E+
Sbjct: 347 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 406

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M A  ++ N   Y+ +I    K G   EAM + +E +  G   D+  Y+ +I  LC N  
Sbjct: 407 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 466

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE-------------CTVDDVERDL 571
           +E A  + + + +EG+  N +TYN+II A  R    +             C++D V  + 
Sbjct: 467 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYN- 525

Query: 572 GKQKESANLDAMCSQDDKD--------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
                   + AMC   + D        + E G   N +   +  L++E      KE R R
Sbjct: 526 ------GLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNV--SYNILISELC----KERRVR 573

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                 L + ++M    + P++VT++ ++N   +      A  LLE+L
Sbjct: 574 DA----LELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 617



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 221/498 (44%), Gaps = 65/498 (13%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L RLG+ D A  +       G       +  +I A    G   EA ++ N M       +
Sbjct: 185 LCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAAD 244

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRIT-------------------- 301
           + T++ V+   CG G V  +    + D M+  G  P  +T                    
Sbjct: 245 VNTFDDVVRGMCGLGRV--REAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAM 302

Query: 302 -----------FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
                      FN+++  C   G    A  L+  M  +G   D  TY+ L+  +CK  ++
Sbjct: 303 LGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRI 362

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
             A  ++ EM  K  +PNVVTY+ ++  + K G  DD   +  EM   G+ L+   YN +
Sbjct: 363 GSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 422

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +    K GR +EA+ + +EM S G   D  +YN ++       + +E   MFE +  + V
Sbjct: 423 IYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 482

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
             N +TY+T+I    + G +++A+++ +E    G   DVV Y+ LI A+CK+G V+ ++ 
Sbjct: 483 VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLV 542

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
           LL+EM ++GI+PN V+YN +I    +    E  V D   +L KQ  +  L         D
Sbjct: 543 LLEEMAEKGIKPNNVSYNILISELCK----ERRVRDA-LELSKQMLNQGLA-------PD 590

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
           +       N + K+     A                   L + +K+H   + P+++T++ 
Sbjct: 591 IVTYNTLINGLCKMGWMHAA-------------------LNLLEKLHNENVHPDIITYNI 631

Query: 651 ILNACSRCNSFEDASMLL 668
           +++   +    +DA+MLL
Sbjct: 632 LISWHCKVRLLDDAAMLL 649



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 216/445 (48%), Gaps = 27/445 (6%)

Query: 120 RHSVVAEEALHHVTAFARDD----VSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWS 173
           RH  V +  L+     A  D         +L +     C AD  TF  ++R +   G   
Sbjct: 203 RHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVR 262

Query: 174 KAIQCFAFAVKREERKNDQGKLASAM-----ISILGRLGKVDLAKNIFETA--LNEGYGN 226
           +A +         +R   +G +   M     +  L R+ + D A+ +      LN     
Sbjct: 263 EAARLV-------DRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN----- 310

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
            V  F+ +I      G   EA  ++ +M     +P+  TY+ ++    K G      V +
Sbjct: 311 -VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG-RIGSAVRL 368

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             +M + G  P+ +T+  +L    + G+W+  R L  EM  +G+  +   YN ++ A+CK
Sbjct: 369 LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCK 428

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +MD A  ++ EM ++  +P++ +Y+T+I       ++++A +MF  +   G+  + ++
Sbjct: 429 DGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGIT 488

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNT++    + GR+++A+ + KEM   G   D V+YN L+    K G  D    + E+M 
Sbjct: 489 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 548

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + PN ++Y+ LI    K    ++A+++ ++    GL  D+V Y+ LI+ LCK G + 
Sbjct: 549 EKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMH 608

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSII 551
           +A++LL+++  E + P+++TYN +I
Sbjct: 609 AALNLLEKLHNENVHPDIITYNILI 633



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 165/328 (50%), Gaps = 1/328 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A  ++ET   +G     + +S L+    + G    A+ +   M++    PN+VTY
Sbjct: 325 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTY 384

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
             V+ +  K G+ +     + ++M   G+  +   +N ++    + G  + A  L  EM 
Sbjct: 385 TIVLHSFCKNGM-WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMR 443

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +G + DI +YNT++  +C   QM+ A  +   +  + +  N +TY+T+I    + GR  
Sbjct: 444 SQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQ 503

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           DA+ +  EM   G  LD VSYN ++    K G  + +L++ +EM   GI+ + V+YN L+
Sbjct: 504 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI 563

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
               K+ +  +   + +QM    ++P+++TY+TLI+   K G    A+ +  +     + 
Sbjct: 564 SELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVH 623

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDE 534
            D++ Y+ LI   CK  L++ A  LL+ 
Sbjct: 624 PDIITYNILISWHCKVRLLDDAAMLLNR 651



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 197/468 (42%), Gaps = 58/468 (12%)

Query: 284 VEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG-IDQDIFTYNTLL 341
           + + D + R  GVQP   ++N +L+V +R      A  L+  MVHR  +    FT+    
Sbjct: 123 LHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAA 182

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
            A+C+  + D A  ++  M      P+ V Y T+I      G + +A  + +EM  +G  
Sbjct: 183 RALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCA 242

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D  +++ V+     LGR  EA  +   M + G     +TY  LL G  +  + DE R M
Sbjct: 243 ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAM 302

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
             ++       N++ ++T+I      G   EA +++      G + D   YS L+  LCK
Sbjct: 303 LGRVP----ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCK 358

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER------DLGKQK 575
            G + SAV LL EM K+G  PNVVTY  ++ +F ++   + T   +E        L  Q 
Sbjct: 359 LGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG 418

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
            +  + A+C    KD    GR D                               +G+ Q+
Sbjct: 419 YNGMIYALC----KD----GRMDEA-----------------------------MGLIQE 441

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASM----LLEELRLFDNQVYG-VAHGLLMGYR 690
           M      P++ +++ I+         E+A      LLEE  + +   Y  + H LL   R
Sbjct: 442 MRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALL---R 498

Query: 691 DNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           D  W  A+ L  E+ L   S     YN L   +   G      LV+LE
Sbjct: 499 DGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNV-DRSLVLLE 545



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 172/373 (46%), Gaps = 18/373 (4%)

Query: 144 DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           ++ +    K C  D +T+  L+  L   G    A++     ++  E+K     + +  I 
Sbjct: 332 ELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVR----LLREMEKKGFAPNVVTYTIV 387

Query: 202 I--LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           +    + G  D  + + E    +G       ++ +I A  + G   EA+ +   M+    
Sbjct: 388 LHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGC 447

Query: 260 KPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            P++ +YN +I   C       +    +F+++L  GV  + IT+N+++    R G W+ A
Sbjct: 448 NPDICSYNTIIYHLCNN--EQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDA 505

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L  EM+  G   D+ +YN L+ A+CK   +D +  ++ EM  K I PN V+Y+ +I  
Sbjct: 506 VRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISE 565

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K  R+ DAL +  +M   G+  D V+YNT+++   K+G    AL + +++ +  +  D
Sbjct: 566 LCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 625

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQ-MKADCVSPNLLTYSTLID------VYSKGGLYK 491
            +TYN L+  + K    D+   +  + M A C   +      L D      +++KG  ++
Sbjct: 626 IITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPDKNFKLYLHTKGDDFQ 685

Query: 492 EAMQIFREFKQAG 504
            ++   +    AG
Sbjct: 686 HSLGCVKPSCPAG 698


>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32630-like [Glycine max]
          Length = 619

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 181/360 (50%), Gaps = 1/360 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++ +L R G+V  AK +       G   TV+ ++ L++A       +    +   M+R
Sbjct: 186 TIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMER 245

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +  +LVTY  +I+             +++++M    V+ D   + S+++   R G   
Sbjct: 246 EGVVASLVTYTILIEWYASSE-RIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVR 304

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF+EM+ RGI  +  T+  L+  +CK  QM+ A  ++ EM  K +  NVV ++TM+
Sbjct: 305 RASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMM 364

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DGY K G +D+A  +   M+  G   D  +YN + S   KL R+EEA  V   M   G+ 
Sbjct: 365 DGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVA 424

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + VT    +  Y ++G   E  R    ++   V PN++TY+TLID YSK    K+A  +
Sbjct: 425 PNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXL 484

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             E  + GL  DV  Y++LI   C    V+ A+ L +EM  +GIR NV TY +II    +
Sbjct: 485 KAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSK 544



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 196/416 (47%), Gaps = 24/416 (5%)

Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETAL 220
            L R   +   +  A++ F + +       ++G +         +  KV+L    F   +
Sbjct: 121 MLFRVCADNRMFRDALKVFDYVM-------EKGLVVEGRSCFXKKCNKVELCVRFFRRMV 173

Query: 221 NEGYGNT-VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC----GK 275
             G  +  V + + ++    R G    A  + N M    + P + TYN +++AC     +
Sbjct: 174 ESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDR 233

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            GVD     EI   M R GV    +T+  L+   +       A  ++ EM  R ++ D++
Sbjct: 234 EGVD-----EILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVY 288

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            Y +++   C+   +  A  +  EM  + I PN  T+  +I G  KAG+++ A  +  EM
Sbjct: 289 VYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEM 348

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           +  G+ L+ V +NT++  Y K G  +EA  +   ME  G   D  TYN L  G  K  +Y
Sbjct: 349 QCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRY 408

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           +E +R+   M    V+PN++T +T I++Y + G   E  +  R  ++ G+  ++V Y+ L
Sbjct: 409 EEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTL 468

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           IDA  KN  V+ A  L  EM ++G+ P+V TY S+I         EC VD V+  L
Sbjct: 469 IDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHG-------ECIVDKVDEAL 517



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 168/319 (52%), Gaps = 8/319 (2%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R+G+   A+ ++E          VY ++++IS   R+G  + A ++F+ M    + PN  
Sbjct: 267 RIGE---AEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTX 323

Query: 265 TYNAVID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
           T+ A+I   C  G ++   +  + ++M   GV  + + FN+++   C RG + EA R L 
Sbjct: 324 TFGALISGVCKAGQMEAAEI--LLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFR-LQ 380

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           + M  +G + D+FTYN L   +CK  + + A  ++  M  K ++PNVVT +T I+ Y + 
Sbjct: 381 DIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQE 440

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G L +       ++  G+  + V+YNT++  Y+K  + ++A  +  EM   G+  D  TY
Sbjct: 441 GNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTY 500

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
            +L+ G     K DE  ++F +M    +  N+ TY+ +I   SK G   EA++++ E  +
Sbjct: 501 TSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMR 560

Query: 503 AGLKADVVLYSALIDALCK 521
            GL  D  ++ AL+ +L K
Sbjct: 561 MGLIPDDRVFEALVGSLHK 579



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 148/296 (50%), Gaps = 8/296 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MIS   R G V  A  +F+  +  G       F ALIS   ++G  + A  +   M+ 
Sbjct: 291 TSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQC 350

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             +  N+V +N ++D  C +G +D      + D M R G + D  T+N L +   +   +
Sbjct: 351 KGVDLNVVIFNTMMDGYCKRGMMD--EAFRLQDIMERKGFEADVFTYNILASGLCKLHRY 408

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A+ + N MV +G+  ++ T  T ++  C+   +      +  +  + + PN+VTY+T+
Sbjct: 409 EEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTL 468

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID Y+K  ++  A  + +EM   G+  D  +Y +++     + + +EAL +  EM   GI
Sbjct: 469 IDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGI 528

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           R +  TY A++ G  K+G+ DE  +++++M    + P+   +  L+     G L+K
Sbjct: 529 RGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALV-----GSLHK 579



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 140/271 (51%), Gaps = 11/271 (4%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+IS + + G+++ A+ + E    +G    V  F+ ++  Y + G   EA  + + M+R 
Sbjct: 327 ALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERK 386

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV-CSRGGLWE 316
             + ++ TYN +     K    ++    + + M+  GV P+ +T  + + + C  G L E
Sbjct: 387 GFEADVFTYNILASGLCKLH-RYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAE 445

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
             R L N +  RG+  +I TYNTL+DA  K  ++  A  + AEM  K + P+V TY+++I
Sbjct: 446 PERFLRN-IEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLI 504

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G     ++D+AL +F+EM   GI  +  +Y  ++S  +K GR +EAL +  EM   G+ 
Sbjct: 505 HGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLI 564

Query: 437 KDAVTYNALLGGYG--------KQGKYDEVR 459
            D   + AL+G           KQ +Y E++
Sbjct: 565 PDDRVFEALVGSLHKPSSHAALKQNEYGELK 595


>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
          Length = 546

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 238/498 (47%), Gaps = 40/498 (8%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R  + D+A  +F+           Y +S LI+++G+ G    A+S    M++  +  +LV
Sbjct: 35  RAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLV 94

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
            Y+ +I+   +   D+   + IF  + R+G+ PD + +NS++ V  +  L+  AR L  E
Sbjct: 95  LYSNLIE-LSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKE 153

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G+  +  +Y+TLL    +  +   A  + AEM   N + ++ T + MID Y +   
Sbjct: 154 MNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDM 213

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           + +A  +F  ++ + I  + VSYNT+L +Y +   F EA+ + + M+   I ++ VTYN 
Sbjct: 214 VKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNT 273

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++  YGK  ++++   + ++M++  + PN +TYST+I ++ K G    A  +F++ + +G
Sbjct: 274 MIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 333

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           ++ D VLY  +I A  + GL+  A  LL E+      P+ +   + I    ++  TE   
Sbjct: 334 VEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTE--- 386

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                    +       A  S + KD           I VFG ++   +          Q
Sbjct: 387 ---------EATWVFRQAFESGEVKD-----------ISVFGCMINLYSRN--------Q 418

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYG 680
             + ++ VF+KM      P+    + +LNA  +   FE A  +  E++    +F ++V+ 
Sbjct: 419 RYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHF 478

Query: 681 VAHGLLMGYRDNIWVQAL 698
               L    +D   V++L
Sbjct: 479 QMLSLYSSKKDFEMVESL 496



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 162/298 (54%), Gaps = 3/298 (1%)

Query: 261 PNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           P++  YN V+ +       D  H   +FD+M +  + PDR T+++L+    + G++++A 
Sbjct: 21  PSVFAYNVVLRNVLRAKQFDIAH--GLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 78

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           +   +M    +  D+  Y+ L++   +      A  I + +    I+P++V Y++MI+ Y
Sbjct: 79  SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY 138

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            KA    +A  +  EM   G+  + VSY+T+LS+Y +  +F EAL V  EM+      D 
Sbjct: 139 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDL 198

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
            T N ++  YG+     E  R+F  ++   + PN+++Y+T++ VY +  L+ EA+ +FR 
Sbjct: 199 TTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRL 258

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            ++  ++ +VV Y+ +I    K    E A +L+ EM   GI PN +TY++II  +G++
Sbjct: 259 MQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 316



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 200/409 (48%), Gaps = 33/409 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+  G+ G  D A +  +    +     +  +S LI    R     +AIS+F+ +KR
Sbjct: 62  STLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKR 121

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P+LV YN++I+  GK  + F+    +  +M   GV P+ +++++LL+V      + 
Sbjct: 122 SGITPDLVAYNSMINVYGKAKL-FREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFL 180

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A ++F EM       D+ T N ++D   +   +  A  +   +   +I PNVV+Y+T++
Sbjct: 181 EALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 240

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             Y +A    +A+++F  M+   I  + V+YNT++ IY K    E+A  + +EM+S GI 
Sbjct: 241 RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE 300

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY------ 490
            +A+TY+ ++  +GK GK D    +F+++++  V  + + Y T+I  Y + GL       
Sbjct: 301 PNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRL 360

Query: 491 -------------------------KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
                                    +EA  +FR+  ++G   D+ ++  +I+   +N   
Sbjct: 361 LHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRY 420

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
            + + + ++M   G  P+      +++A+G+    E   D V R++ ++
Sbjct: 421 VNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFE-KADTVYREMQEE 468



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 185/380 (48%), Gaps = 31/380 (8%)

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           P    +N +L    R   ++ A  LF+EM  R +  D +TY+TL+ +  K    D A   
Sbjct: 21  PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 80

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           + +M    +S ++V YS +I+   +      A+++FS +K  GI  D V+YN+++++Y K
Sbjct: 81  LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 140

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
              F EA L+ KEM  +G+  + V+Y+ LL  Y +  K+ E   +F +MK    + +L T
Sbjct: 141 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 200

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
            + +IDVY +  + KEA ++F   ++  ++ +VV Y+ ++    +  L   A+ L   M 
Sbjct: 201 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 260

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
           ++ I  NVVTYN++I  +G++   E   + V+                    + ++    
Sbjct: 261 RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQ----------------EMQSRGIEPNAI 304

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
           T + II ++G     KAG+  +             +FQK+    ++ + V +  ++ A  
Sbjct: 305 TYSTIISIWG-----KAGKLDRAA----------TLFQKLRSSGVEIDQVLYQTMIVAYE 349

Query: 657 RCNSFEDASMLLEELRLFDN 676
           R      A  LL EL+L DN
Sbjct: 350 RVGLMGHAKRLLHELKLPDN 369



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 205/396 (51%), Gaps = 21/396 (5%)

Query: 163 LRELGNR-GEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETA 219
           L EL  R  ++SKAI  F+    R +R      L +  +MI++ G+  K+     +    
Sbjct: 99  LIELSRRLCDYSKAISIFS----RLKRSGITPDLVAYNSMINVYGK-AKLFREARLLIKE 153

Query: 220 LNEG--YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
           +NE     NTV ++S L+S Y  +    EA+SVF  MK  N   +L T N +ID  G+  
Sbjct: 154 MNEAGVLPNTV-SYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLD 212

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +  K    +F  + +  ++P+ +++N++L V     L+  A +LF  M  + I+Q++ TY
Sbjct: 213 M-VKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 271

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           NT++    K  + + A  ++ EM ++ I PN +TYST+I  + KAG+LD A  +F +++ 
Sbjct: 272 NTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRS 331

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME--SSGIRKDAVTYNALLGGYGKQGKY 455
            G+ +D+V Y T++  Y ++G    A  +  E++   +  R+ A+T  A      K G+ 
Sbjct: 332 SGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILA------KAGRT 385

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           +E   +F Q        ++  +  +I++YS+   Y   +++F + + AG   D  + + +
Sbjct: 386 EEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMV 445

Query: 516 IDALCKNGLVESAVSLLDEMTKEG-IRPNVVTYNSI 550
           ++A  K    E A ++  EM +EG + P+ V +  +
Sbjct: 446 LNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQML 481



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 180/368 (48%), Gaps = 42/368 (11%)

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           +P+V  Y+ ++    +A + D A  +F EM+   +  DR +Y+T+++ + K G F+ AL 
Sbjct: 20  TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 79

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
             ++ME   +  D V Y+ L+    +   Y +   +F ++K   ++P+L+ Y+++I+VY 
Sbjct: 80  WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 139

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K  L++EA  + +E  +AG+  + V YS L+    +N     A+S+  EM +     ++ 
Sbjct: 140 KAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLT 199

Query: 546 TYNSIIDAFG---------------RSATTECTV---DDVERDLGKQK---ESANLDAMC 584
           T N +ID +G               R    E  V   + + R  G+ +   E+ +L  + 
Sbjct: 200 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 259

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVA-EKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
            +  KD+++   T N +IK++G+ +  EKA                  + Q+M    I+P
Sbjct: 260 QR--KDIEQNVVTYNTMIKIYGKTMEHEKAT----------------NLVQEMQSRGIEP 301

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH-GLLMGY-RDNIWVQALSLF 701
           N +T+S I++   +    + A+ L ++LR    ++  V +  +++ Y R  +   A  L 
Sbjct: 302 NAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLL 361

Query: 702 DEVKLMDS 709
            E+KL D+
Sbjct: 362 HELKLPDN 369



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/342 (21%), Positives = 157/342 (45%), Gaps = 40/342 (11%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI + G+L  V  A  +F +         V +++ ++  YG +    EAI +F  M+R +
Sbjct: 204 MIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD 263

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           ++ N+VTYN +I   GK  ++ +    +  +M   G++P+ IT+++++++  + G  + A
Sbjct: 264 IEQNVVTYNTMIKIYGKT-MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRA 322

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP----------- 367
             LF ++   G++ D   Y T++ A  +   M  A  ++ E+   +  P           
Sbjct: 323 ATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKA 382

Query: 368 --------------------NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
                               ++  +  MI+ Y++  R  + + +F +M+  G   D    
Sbjct: 383 GRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVI 442

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSG-IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
             VL+ Y K   FE+A  V +EM+  G +  D V +  +L  Y  +  ++ V  +F++++
Sbjct: 443 AMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFQRLE 501

Query: 467 ADCVSPNLLT---YSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +D   PN+ +   +  +  +Y +     +A ++    ++ G+
Sbjct: 502 SD---PNVNSKELHLVVAALYERADKLNDASRVMNRMRERGI 540


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 233/491 (47%), Gaps = 35/491 (7%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G+  +  AF+ LI AY +    ++A+  F  MK ++ KP++ TYN V+    +  V    
Sbjct: 121 GFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVL-L 179

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
            + I++ ML+    P+  TF+ L+    + G  + A  +F+EM  R I  +  TY  ++ 
Sbjct: 180 ALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIIS 239

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            +C+  + D+A+ +   M      P+ VTY+ ++ G+ K GR+D+AL +    +     L
Sbjct: 240 GLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVL 299

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D+  Y+ ++    +  RFE+A +  ++M    I+ D + Y  ++ G  K GK+ +  R+ 
Sbjct: 300 DKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLL 359

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
            +M    + P+   Y+ LI  Y   GL  EA  +  E  +    +    Y+ LI  +C++
Sbjct: 360 NEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRS 419

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDA 582
           GLV  A  + +EM K G  P+VVT+N++ID F       C   ++E+             
Sbjct: 420 GLVGDAQQIFNEMEKHGCYPSVVTFNALIDGF-------CKAGNIEK------------- 459

Query: 583 MCSQDDKDVQEAGRTDNQIIKV---FGQLVAEKAGQGKKENRCRQE-ILCILGVFQKMHK 638
             +Q      E GR  +  +++     +++   + Q   E  C    IL    +  ++  
Sbjct: 460 --AQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTD 517

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYG-VAHGLLMGYRDNI 693
               PN++T++ +++   +  +   A  L +EL+L     D+  YG + +GLL   R+  
Sbjct: 518 SGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREE- 576

Query: 694 WVQALSLFDEV 704
              A ++ D++
Sbjct: 577 --DAFTVLDQI 585



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 204/427 (47%), Gaps = 22/427 (5%)

Query: 150 EFKLCG----ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGR 205
           E K CG    AD +T L++         KA++ F   +K  + K D     + ++ ++ R
Sbjct: 116 EIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM-MKDFDCKPDVFT-YNTVLHVMVR 173

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
              V LA  I+   L       +  FS LI    +SG  Q A+ +F+ M +  + PN +T
Sbjct: 174 KEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKIT 233

Query: 266 YNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           Y  +I   C     D  +   +F  M  +G  PD +T+N+LL    + G  + A  L   
Sbjct: 234 YTIIISGLCQAQKADVAY--RLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKY 291

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
                   D   Y+ L+D + +  + + A     +M   NI P+V+ Y+ M+ G +KAG+
Sbjct: 292 FEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGK 351

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
             DAL + +EM   G+  D   YN ++  Y  LG  +EA  +  E+  +     A TY  
Sbjct: 352 FKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTI 411

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE----- 499
           L+ G  + G   + +++F +M+     P+++T++ LID + K G  ++A  +F +     
Sbjct: 412 LICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGR 471

Query: 500 ----FKQAGLKADVVLYSA----LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
               F +    A+ VL +A    +++ LC +GL+  A ++L ++T  G  PN++TYN +I
Sbjct: 472 NPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILI 531

Query: 552 DAFGRSA 558
             F ++ 
Sbjct: 532 HGFCKAG 538



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 194/413 (46%), Gaps = 32/413 (7%)

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           V++N +ID   K    F+   ++  ++ R G       F  L+   ++  + E A   F 
Sbjct: 92  VSHNMIIDMLIKDN-GFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFE 150

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
            M       D+FTYNT+L  + +   + LA  I   M   N  PN+ T+S +IDG  K+G
Sbjct: 151 MMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSG 210

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           +  +AL MF EM    I  ++++Y  ++S   +  + + A  +   M+  G   D+VTYN
Sbjct: 211 KTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYN 270

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           ALL G+ K G+ DE   + +  + D    +   YS LID   +   +++A   +R+  + 
Sbjct: 271 ALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEH 330

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
            +K DV+LY+ ++  L K G  + A+ LL+EMT+ G+ P+   YN++I  +         
Sbjct: 331 NIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYC-------- 382

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
                 DLG   E+ +L    S++D        T    I + G   +   G  ++     
Sbjct: 383 ------DLGLLDEAKSLHLEISKNDCFSSACTYT----ILICGMCRSGLVGDAQQ----- 427

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
                   +F +M K    P+VVTF+A+++   +  + E A +L  ++ +  N
Sbjct: 428 --------IFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRN 472



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 155/348 (44%), Gaps = 19/348 (5%)

Query: 122 SVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADD--YTFLLRELGNRGEWSKAIQCF 179
           SV     LH      R D +LG +LK FE      D   Y+ L+  L     +  A Q +
Sbjct: 266 SVTYNALLHGFCKLGRVDEALG-LLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDA-QVW 323

Query: 180 AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYG 239
              +     K D   L + M+  L + GK   A  +       G     + ++ALI  Y 
Sbjct: 324 YRKMTEHNIKPDV-ILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYC 382

Query: 240 RSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDR 299
             G   EA S+   + + +   +  TY  +I    + G+      +IF++M ++G  P  
Sbjct: 383 DLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGL-VGDAQQIFNEMEKHGCYPSV 441

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEM-----------VHRGIDQ--DIFTYNTLLDAICK 346
           +TFN+L+    + G  E A+ LF +M           + +G ++  D  +  T+++ +C 
Sbjct: 442 VTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCD 501

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +  A+ I+ ++     +PN++TY+ +I G+ KAG ++ A  +F E++  G+  D V+
Sbjct: 502 SGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVT 561

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           Y T+++      R E+A  V  ++  +G       Y + +    ++ K
Sbjct: 562 YGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNK 609


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 171/328 (52%), Gaps = 3/328 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V ++S +I  + + G   +A ++F  M  + + PN+VT N+VID  C    +D    V  
Sbjct: 121 VVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAV-- 178

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M+   + P+  T+NSL+      G W  A  +  EM   G   ++ TYN L+D +CK
Sbjct: 179 LQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCK 238

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
                 A EI   M      P+  TY +++ GYA  G L +  N+   M   G+  +  +
Sbjct: 239 SGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHT 298

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           ++  +  Y K GR +EA L   +M+  G   D VTY  ++ G  K G+ D+    F QM 
Sbjct: 299 FSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMI 358

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            D +SPN++T++TLI  +S  G +++A ++F E    G+  DV +++A+ID L K G V 
Sbjct: 359 DDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVT 418

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            A  L D M + G +PNVV+YN++I  +
Sbjct: 419 EAQKLFDLMPRAGAKPNVVSYNTMIHGY 446



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 190/355 (53%), Gaps = 6/355 (1%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            +++I  L ++  +D A+ + +  ++E        +++LI  Y  SG   EA+ +   M 
Sbjct: 159 CNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMS 218

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
           R   +PN+VTYN +ID   K G       EIF+ M+++G +PD  T+ SLL    + G L
Sbjct: 219 RDGQRPNVVTYNMLIDCLCKSGF-HAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNL 277

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E   N+ + MV  G+  +  T++  + A CK  ++D A     +M      P++VTY+T
Sbjct: 278 VEM-NNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTT 336

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +IDG  K GRLDDA++ F +M   G+  + +++ T++  ++  G++E+A  +  EM   G
Sbjct: 337 VIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRG 396

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I  D   + A++    K+GK  E +++F+ M      PN+++Y+T+I  Y   G   E M
Sbjct: 397 IPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVM 456

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGL---VESAVSLLDEMTKEGIRPNVVT 546
           ++  +    GLK   V ++ L+D +   GL   V++  +L+D   ++G   +++T
Sbjct: 457 KLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILT 511



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 177/360 (49%), Gaps = 6/360 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS-VFNSMKRY 257
           +IS     G ++L        +  G      AF+ L+          +A++ V   M   
Sbjct: 19  LISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPEL 78

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNG--VQPDRITFNSLLAVCSRGGL 314
              P++ +Y+ ++   C +   +     E+   M  +G    PD +++++++    + G 
Sbjct: 79  GCTPDVFSYSTLLKGLCAEKKCE--EAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGD 136

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A  LF +M+  GI  ++ T N+++D +CK   MD A  ++ +M  ++I PN  TY++
Sbjct: 137 VGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNS 196

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I GY  +G+  +A+ +  EM   G   + V+YN ++    K G   EA  +   M  SG
Sbjct: 197 LIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSG 256

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
            + DA TY +LL GY  +G   E+  + + M  + +  N  T+S  I  Y K G   EA 
Sbjct: 257 PKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEAS 316

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             F + +Q G   D+V Y+ +ID LCK G ++ A+S   +M  +G+ PN++T+ ++I  F
Sbjct: 317 LTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGF 376



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 194/449 (43%), Gaps = 46/449 (10%)

Query: 295 VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAF 354
           V PD  TF  L++ C   G          +++  G+  D   +  LL  +C   +   A 
Sbjct: 9   VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAM 68

Query: 355 EI-MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL--DRVSYNTVL 411
            I +  MP    +P+V +YST++ G     + ++A  +   M   G     D VSY+TV+
Sbjct: 69  NIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVI 128

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
             + K G   +A  +  +M   GI  + VT N+++ G  K    D+   + +QM  + + 
Sbjct: 129 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 188

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           PN  TY++LI  Y   G + EA++I +E  + G + +VV Y+ LID LCK+G    A  +
Sbjct: 189 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREI 248

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
            + M + G +P+  TY S++  +                        NL  M +  D  V
Sbjct: 249 FNSMIQSGPKPDATTYGSLLHGYAT--------------------EGNLVEMNNVKDLMV 288

Query: 592 QEAGRTDNQI--IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
           Q   R+++    I+++      K G+  + +            F KM +L   P++VT++
Sbjct: 289 QNGMRSNHHTFSIEIYAYC---KCGRLDEASL----------TFIKMQQLGFMPDIVTYT 335

Query: 650 AILNACSRCNSFEDA-----SMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEV 704
            +++   +    +DA      M+ + L         + HG  M  +   W +A  LF E+
Sbjct: 336 TVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGK---WEKAEELFYEM 392

Query: 705 KLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
                      + A+ D L+  G+   AQ
Sbjct: 393 MDRGIPPDVTIFTAMIDRLFKEGKVTEAQ 421



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 173/404 (42%), Gaps = 64/404 (15%)

Query: 98  GRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGAD 157
           G+  T F   +  G P   + T +SV+  + L  V A  + +  L  ++ +     C   
Sbjct: 138 GKAYTLFCKMLDHGIPP-NVVTCNSVI--DGLCKVQAMDKAEAVLQQMIDEHIMPNCTT- 193

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
            Y  L+    + G+W++A++      +  +R N      + +I  L + G    A+ IF 
Sbjct: 194 -YNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVV--TYNMLIDCLCKSGFHAEAREIFN 250

Query: 218 TALNEG-------YGNTVYA----------------------------FSALISAYGRSG 242
           + +  G       YG+ ++                             FS  I AY + G
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCG 310

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
              EA   F  M++    P++VTY  VID  C  G +D    +  F  M+ +G+ P+ IT
Sbjct: 311 RLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLD--DAMSRFCQMIDDGLSPNIIT 368

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           F +L+   S  G WE A  LF EM+ RGI  D+  +  ++D + K  ++  A ++   MP
Sbjct: 369 FTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMP 428

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG--- 418
                PNVV+Y+TMI GY  AG + + + +  +M  +G+    V++NT+L     +G   
Sbjct: 429 RAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKP 488

Query: 419 ----------------RFEEALLVCKEMESSGIRKDAVTYNALL 446
                           R E+ L + +EM     + D +T N  L
Sbjct: 489 DVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKL 532


>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 625

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 175/336 (52%), Gaps = 3/336 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           + FS L+  Y  +   QEAI VF  M     +P+L     ++++  K  +    V +++ 
Sbjct: 131 HVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLT-DMVWKVYK 189

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M R GV+ +   +N L+  C + G  E A NL +EM  + +  D+FTYNTL+   CK  
Sbjct: 190 KMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKG 249

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
               A  +   M  + I P++VTY+++I G+ K GR+ +A+ +F E++      + V+Y 
Sbjct: 250 MHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIR--DATPNHVTYT 307

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T++  Y +L   ++AL + +EME+ G+    VTYN++L    + G+  +  ++  +M   
Sbjct: 308 TLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEK 367

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + P+ +T +TLI+ Y K G  K A+++     +AGLK D   Y ALI   CK   ++ A
Sbjct: 368 KIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGA 427

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
             LL  M   G  P+  TY+ ++D +      E  +
Sbjct: 428 KELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVL 463



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 202/399 (50%), Gaps = 7/399 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           +++L+    N     +AIQ F   +    R +      + +++ L +    D+   +++ 
Sbjct: 133 FSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHA--CTVLLNSLAKDRLTDMVWKVYKK 190

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G    ++ ++ LI A  +SG  ++A ++ + M+   + P+L TYN +I    K G+
Sbjct: 191 MARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGM 250

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            ++  + + D M R G++PD +T+NSL+   C  G + EA R LF E+  R    +  TY
Sbjct: 251 HYE-ALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMR-LFKEI--RDATPNHVTY 306

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TL+D  C+   +D A  +  EM A+ + P VVTY++++    + GR+ DA  + +EM  
Sbjct: 307 TTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSE 366

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
             I  D V+ NT+++ Y K+G  + AL V   M  +G++ D  TY AL+ G+ K  + D 
Sbjct: 367 KKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDG 426

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            + +   M     SP+  TYS L+D Y      +  +++  EF + GL  D  LY ALI 
Sbjct: 427 AKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIR 486

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             CK   V+ A  +   M ++G   + V Y S+  A+ +
Sbjct: 487 RFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWK 525



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 155/280 (55%), Gaps = 4/280 (1%)

Query: 279 DFKHVVEIFDDMLRNGVQPD--RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           DF     +   ++R    PD     F+ L+ V +   + + A  +F  M+  G    +  
Sbjct: 108 DFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHA 167

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
              LL+++ K    D+ +++  +M    +  N+  Y+ +I    K+G ++ A N+ SEM+
Sbjct: 168 CTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEME 227

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
              +  D  +YNT++S+Y K G   EAL V   ME  GI+ D VTYN+L+ G+ K+G+  
Sbjct: 228 SKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMR 287

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E  R+F++++    +PN +TY+TLID Y +     +A+++  E +  GL   VV Y++++
Sbjct: 288 EAMRLFKEIRD--ATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSIL 345

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             LC+ G +  A  LL+EM+++ I P+ VT N++I+A+ +
Sbjct: 346 RKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCK 385



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 178/356 (50%), Gaps = 7/356 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    + G V+ A N+     ++     ++ ++ LIS Y + G   EA+SV + M+R
Sbjct: 204 NVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMER 263

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +KP++VTYN++I    K G   +  + +F ++      P+ +T+ +L+    R    +
Sbjct: 264 EGIKPDIVTYNSLIHGFCKEG-RMREAMRLFKEI--RDATPNHVTYTTLIDGYCRLNDLD 320

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L  EM  +G+   + TYN++L  +C+  ++  A +++ EM  K I P+ VT +T+I
Sbjct: 321 QALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLI 380

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           + Y K G +  AL + + M   G+ LD+ +Y  ++  + K+   + A  +   M  +G  
Sbjct: 381 NAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFS 440

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQM--KADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
               TY+ L+ GY  Q   + V ++ ++   K  CV  +L  Y  LI  + K      A 
Sbjct: 441 PSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSL--YRALIRRFCKREQVDYAK 498

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           +IF   ++ G   D V+Y++L  A  K G   +A  LLDEM K  +   +  Y ++
Sbjct: 499 KIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRAL 554



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 139/297 (46%), Gaps = 33/297 (11%)

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           N   +S ++  YA      +A+ +F  M   G      +   +L+  AK    +    V 
Sbjct: 129 NSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVY 188

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           K+M   G+  +   YN L+    K G  ++   +  +M++ CV P+L TY+TLI +Y K 
Sbjct: 189 KKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKK 248

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           G++ EA+ +    ++ G+K D+V Y++LI   CK G +  A+ L  E+      PN VTY
Sbjct: 249 GMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI--RDATPNHVTY 306

Query: 548 NSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
            ++ID +       C ++D+++ L  ++E          + + +     T N I++   +
Sbjct: 307 TTLIDGY-------CRLNDLDQALRLREE---------MEAQGLYPTVVTYNSILRKLCE 350

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           +     G+ +  N+          +  +M + KI+P+ VT + ++NA  +    + A
Sbjct: 351 I-----GRIRDANK----------LLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSA 392



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/187 (20%), Positives = 83/187 (44%), Gaps = 5/187 (2%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +I+   ++G +  A  +    +  G     + + ALI  + +      A  +  SM 
Sbjct: 376 CNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSML 435

Query: 256 RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGG 313
                P+  TY+ ++D  C +   +   V+++ D+ +R G+  D+  + +L+   C R  
Sbjct: 436 DAGFSPSYCTYSWLVDGYCNQQNEE--AVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQ 493

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           + + A+ +F+ M  +G   D   Y +L  A  K  + + A +++ EM  + +   +  Y 
Sbjct: 494 V-DYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYR 552

Query: 374 TMIDGYA 380
            +   YA
Sbjct: 553 ALNASYA 559


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 180/365 (49%), Gaps = 1/365 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    + GK+D+A +        G   TVY +S+LIS + + G  + A S+F+ M  
Sbjct: 394 SILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIA 453

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             LKPN+V Y ++I    K G +  +   ++ +M   G+ P+  TF +L++         
Sbjct: 454 NGLKPNVVIYTSLISGYCKEG-ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMA 512

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF EMV   +  +  TYN L++  CK      AFE++ EM  K + P+  TY  +I
Sbjct: 513 EANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLI 572

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G    GR+ +A    ++++     L+ + ++ +L  Y K GR ++AL  C+EM   G+ 
Sbjct: 573 SGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVA 632

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D V Y+ L+ G  +Q     +  + +QM    + P+ + Y+T+ID  +K G  K A  +
Sbjct: 633 MDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGL 692

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           +      G   +VV Y+ALI+ LCK GL++ A  L  EM      PN  TY   +D    
Sbjct: 693 WDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTS 752

Query: 557 SATTE 561
               E
Sbjct: 753 EGNIE 757



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 232/485 (47%), Gaps = 31/485 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A++  L  L     A+ +     + G   +V  ++  I    ++    EA+ + N +  
Sbjct: 219 TAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSY 278

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L+ ++ TY  ++    K   +F+   E+ ++M+  G  P     ++L+    + G   
Sbjct: 279 KGLRADVGTYCTLVLGLCKVE-EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIG 337

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +A +L N++   G+   +F YN L++++CK  ++D A  +   M  K + PN VTYS +I
Sbjct: 338 SAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILI 397

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D + K G+LD AL+   +M  +GI      Y++++S + KLG+   A  +  EM ++G++
Sbjct: 398 DSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLK 457

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + V Y +L+ GY K+G+     R++ +M    +SPN  T++ LI          EA ++
Sbjct: 458 PNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF-- 554
           F E  +  +  + V Y+ LI+  CK G    A  LLDEM ++G+ P+  TY  +I     
Sbjct: 518 FGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCS 577

Query: 555 -GRSATTECTVDDVERDLGKQKE---SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
            GR +     ++D++ +  K  E   SA L   C +        GR D+ +         
Sbjct: 578 TGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKE--------GRLDDAL-----DACR 624

Query: 611 EKAGQGKKENRCRQEILC-----------ILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
           E  G+G   +     +L            I+ + ++MH   ++P+ V ++ +++A ++  
Sbjct: 625 EMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAG 684

Query: 660 SFEDA 664
           + + A
Sbjct: 685 NLKMA 689



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 197/440 (44%), Gaps = 70/440 (15%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + +++IS   + G++  A  ++     +G     Y F+ALIS    +    EA  +F  M
Sbjct: 462 IYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEM 521

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGG 313
             +N+ PN VTYN +I+   K G   +   E+ D+M+  G+ PD  T+  L++ +CS G 
Sbjct: 522 VEWNVIPNEVTYNVLIEGHCKEGNTVR-AFELLDEMVEKGLVPDTYTYRPLISGLCSTGR 580

Query: 314 LWEA----------------------------------ARNLFNEMVHRGIDQDIFTYNT 339
           + EA                                  A +   EM+ RG+  D+  Y+ 
Sbjct: 581 VSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSV 640

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+  I +        +++ +M  + + P+ V Y+TMID  AKAG L  A  ++  M   G
Sbjct: 641 LIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEG 700

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS-------------------------- 433
              + V+Y  +++   K+G  ++A L+C+EM +S                          
Sbjct: 701 CLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAI 760

Query: 434 --------GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
                   G   + VTYN L+ G+ K G+  E   +   M    +SP+ ++YST+I  Y 
Sbjct: 761 QLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYC 820

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           + G  KEA++++      G+  D V Y+ LI   C  G +  A  L D+M + G++PN  
Sbjct: 821 RRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRA 880

Query: 546 TYNSIIDAFGRSATTECTVD 565
           TYNS+I      ++   T D
Sbjct: 881 TYNSLIHGTCLMSSVSSTAD 900



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 183/395 (46%), Gaps = 37/395 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++IS   +LGK+  AK++F+  +  G    V  +++LIS Y + G    A  +++ M  
Sbjct: 429 SSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTG 488

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + PN  T+ A+I              ++F +M+   V P+ +T+N L+    + G   
Sbjct: 489 KGISPNTYTFTALISGLCHAN-RMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTV 547

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L +EMV +G+  D +TY  L+  +C   ++  A E M ++  +    N + +S ++
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALL 607

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN---------------------------- 408
            GY K GRLDDAL+   EM   G+ +D V Y+                            
Sbjct: 608 HGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLR 667

Query: 409 -------TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
                  T++   AK G  + A  +   M S G   + VTY AL+ G  K G  D+   +
Sbjct: 668 PDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELL 727

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
             +M A    PN  TY+  +D  +  G  ++A+Q+  +    G  A+ V Y+ LI   CK
Sbjct: 728 CREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCK 786

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            G ++ A  +L  M   GI P+ ++Y++II  + R
Sbjct: 787 LGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCR 821



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 155/333 (46%), Gaps = 1/333 (0%)

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
           +T   F  LI  Y ++    + + V   M    + P + T + V++   +    F+  + 
Sbjct: 143 STTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIR-QFRMALH 201

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +FD+++ +G++PD   + +++        +  AR +   M   G D  + TYN  +  +C
Sbjct: 202 LFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLC 261

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  ++  A EI   +  K +  +V TY T++ G  K    +    M +EM   G      
Sbjct: 262 KNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEA 321

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           + + ++    K G    A  +  +++  G+      YNAL+    K GK DE   +F  M
Sbjct: 322 AVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNM 381

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
               + PN +TYS LID + K G    A+    +  + G+KA V  YS+LI   CK G +
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            +A SL DEM   G++PNVV Y S+I  + +  
Sbjct: 442 RAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 212/469 (45%), Gaps = 43/469 (9%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M+  G+ P   T + +L    R   +  A +LF+E+V  G+  D++ Y  ++ ++C+   
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              A E++  M +     +V TY+  I G  K  R+ +A+ + + + + G+  D  +Y T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    K+  FE    +  EM   G        + L+ G  K+G       +  ++K   
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           V+P+L  Y+ LI+   K G   EA  +F      GL  + V YS LID+ CK G ++ A+
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCSQDD 588
             L +MT+ GI+  V  Y+S+I    +              LGK + + +L D M +   
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCK--------------LGKLRAAKSLFDEMIAN-- 454

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
                 G   N +I  +  L++    +G+  N  R        ++ +M    I PN  TF
Sbjct: 455 ------GLKPNVVI--YTSLISGYCKEGELHNAFR--------LYHEMTGKGISPNTYTF 498

Query: 649 SAILNACSRCNSFEDASMLLEEL---RLFDNQV-YGVAHGLLMGY-RDNIWVQALSLFDE 703
           +A+++     N   +A+ L  E+    +  N+V Y V   L+ G+ ++   V+A  L DE
Sbjct: 499 TALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNV---LIEGHCKEGNTVRAFELLDE 555

Query: 704 VKLMDSSTASAFYNALTDMLWHFGQKRGAQLVV--LEGKRRQVWENVWS 750
           +        +  Y  L   L   G+   A+  +  L+G+++++ E  +S
Sbjct: 556 MVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFS 604



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 129/274 (47%), Gaps = 23/274 (8%)

Query: 157 DDYTFLLRELGNRGEWSKAIQCFAFAV----KREERKN---------DQG-----KLASA 198
           DD     RE+  RG  +  + C++  +    ++++R++         DQG      L + 
Sbjct: 617 DDALDACREMLGRG-VAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTT 675

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI    + G + +A  +++  ++EG    V  ++ALI+   + G   +A  +   M   N
Sbjct: 676 MIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASN 735

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
             PN  TY   +D     G + +  +++ D +L  G   + +T+N L+   C  G + EA
Sbjct: 736 SLPNQNTYACFLDYLTSEG-NIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEA 793

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  L N M+  GI  D  +Y+T++   C+   +  A ++   M  + ++P+ V Y+ +I 
Sbjct: 794 AEVLVN-MIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIY 852

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
           G    G L  A  +  +M   G+  +R +YN+++
Sbjct: 853 GCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 886



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 129/314 (41%), Gaps = 24/314 (7%)

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           +  +I  Y +  R  D L +   M   GI     + + VL+   ++ +F  AL +  E+ 
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           SSG+R D   Y A++    +   +   R +  +M++     ++ TY+  I    K     
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA++I       GL+ADV  Y  L+  LCK    E+   +++EM + G  P+    ++++
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327

Query: 552 DAFGRSATTECTVDDVE--RDLGKQKE----SANLDAMCSQDDKDVQEA--------GRT 597
           D   +        D V   +  G        +A +++MC     D  E+        G  
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
            N +   +  L+     +GK +          L    KM ++ IK  V  +S++++   +
Sbjct: 388 PNDV--TYSILIDSFCKRGKLD--------VALHFLGKMTEVGIKATVYPYSSLISGHCK 437

Query: 658 CNSFEDASMLLEEL 671
                 A  L +E+
Sbjct: 438 LGKLRAAKSLFDEM 451


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 183/351 (52%), Gaps = 3/351 (0%)

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
           G  G +D A   F   L+      +  F+ L+S+  R    +  +S+F  M+   +K N+
Sbjct: 16  GYFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNV 75

Query: 264 VTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
            T + +I+  C    VD+     +F   L+ G +PD + F +L+    R G  E A  L 
Sbjct: 76  CTLSILINCFCFLHHVDYGF--SVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLL 133

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            EM   G   D+ T N+L+   C   ++D   +I   M +K + P+V +YS  I+GY K 
Sbjct: 134 KEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKV 193

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
            ++D+A+ +F EM   G+  + V+YNT++    +  R  +A ++ ++M + G+  D + Y
Sbjct: 194 EKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAY 253

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           + LL G+ KQG  DE+  +F++M+   V P+L+ Y+ +I+   +    K+A ++      
Sbjct: 254 STLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIV 313

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            GLK DV  Y+AL+D LC+ G +  A+ L  +M ++G  P   +YN ++  
Sbjct: 314 EGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQG 364



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 198/378 (52%), Gaps = 8/378 (2%)

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
           G  G   +A++ FN M   N +P ++ +N ++ +  +    ++ VV +F +M   G++ +
Sbjct: 16  GYFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMK-KYETVVSLFKEMEFRGIKYN 74

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
             T + L+         +   ++F + + RG   D+  + TL+D +C+  + +LA  ++ 
Sbjct: 75  VCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLK 134

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
           EM      P+VVT ++++ GY   G++D    +F  M   G+  D  SY+  ++ Y K+ 
Sbjct: 135 EMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVE 194

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           + +EA+ +  EM   G+  +AVTYN L+    +  +  + + +F +M A  +SP++L YS
Sbjct: 195 KIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYS 254

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           TL+D + K G   E + +F+E ++  +K D+V+Y+ +I+ +C++  V+ A  +L  +  E
Sbjct: 255 TLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVE 314

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
           G++P+V TY +++D   R    E ++ +  R   K +E   +   CS    +V   G   
Sbjct: 315 GLKPDVHTYTALVDGLCR----EGSIIEALRLFRKMEEDGCMPGSCSY---NVLLQGCLQ 367

Query: 599 NQIIKVFGQLVAEKAGQG 616
           +       QL+ E A +G
Sbjct: 368 HNDTSTVVQLIHEMADRG 385



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 180/356 (50%), Gaps = 5/356 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++S + R+ K +   ++F+     G    V   S LI+ +    +     SVF    +  
Sbjct: 46  LLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRG 105

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
            KP++V +  +ID  C  G  +      +  +M   G  PD +T NSL+   CS+G + +
Sbjct: 106 FKPDVVIFTTLIDGVCRIGKTEL--AAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKI-D 162

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
             R +F+ MV +G+  D+++Y+  ++  CK  ++D A E+  EM  + + PN VTY+T+I
Sbjct: 163 KVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLI 222

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
               +A R  DA  +F +M   G+  D ++Y+T+L  + K G  +E L++ +EM+   ++
Sbjct: 223 KALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVK 282

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D V Y  ++ G  +  K  + + +  ++  + + P++ TY+ L+D   + G   EA+++
Sbjct: 283 PDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRL 342

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           FR+ ++ G       Y+ L+    ++    + V L+ EM   G   + VT   + D
Sbjct: 343 FRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFLKD 398



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 162/327 (49%), Gaps = 3/327 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+    L  VD   ++F   L  G+   V  F+ LI    R G  + A  +   M  
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               P++VT N+++   C +G +D   V +IF  M+  G++PD  +++  +    +    
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKID--KVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKI 196

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  LF+EM HRG+  +  TYNTL+ A+C+  +   A  +  +M A  +SP+++ YST+
Sbjct: 197 DEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTL 256

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +DG+ K G LD+ L +F EM+   +  D V Y  +++   +  + ++A  V   +   G+
Sbjct: 257 LDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGL 316

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D  TY AL+ G  ++G   E  R+F +M+ D   P   +Y+ L+    +       +Q
Sbjct: 317 KPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQ 376

Query: 496 IFREFKQAGLKADVVLYSALIDALCKN 522
           +  E    G  AD V  + L D L  N
Sbjct: 377 LIHEMADRGFYADAVTRTFLKDFLPGN 403



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/377 (22%), Positives = 165/377 (43%), Gaps = 39/377 (10%)

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             +D A      M  +N  P ++ ++ ++    +  + +  +++F EM+F GI  +  + 
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           + +++ +  L   +    V  +    G + D V +  L+ G  + GK +    + ++M  
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
               P+++T ++L+  Y   G   +  +IF      GLK DV  YS  I+  CK   ++ 
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDE 198

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
           A+ L DEM+  G+ PN VTYN++I A  ++             L  +        MC+  
Sbjct: 199 AMELFDEMSHRGVVPNAVTYNTLIKALCQA-------------LRPRDAQVLFRKMCA-- 243

Query: 588 DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
                  G + +  I  +  L+     QG  +         +L +FQ+M +  +KP++V 
Sbjct: 244 ------CGLSPD--ILAYSTLLDGFCKQGNLDE--------MLVLFQEMQRRLVKPDLVV 287

Query: 648 FSAILNACSRCNSFEDAS-----MLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFD 702
           ++ I+N   R    +DA      +++E L+   +    +  GL    R+   ++AL LF 
Sbjct: 288 YTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLC---REGSIIEALRLFR 344

Query: 703 EVKLMDSSTASAFYNAL 719
           +++       S  YN L
Sbjct: 345 KMEEDGCMPGSCSYNVL 361


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 137/545 (25%), Positives = 256/545 (46%), Gaps = 31/545 (5%)

Query: 142 LGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           L ++ + F F    A  +  LLR   + G+ S A+  F    K   R + +    + +++
Sbjct: 137 LAEVYRDFTFS---AVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRS--CNRLLN 191

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            L + G   +A  ++      G     +  + +  AY R G   +A+     M+   L+ 
Sbjct: 192 KLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEV 251

Query: 262 NLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           NLV Y+AV+D  CG G  +      I + + R G+ P+ +T+  L+    + G  E A  
Sbjct: 252 NLVAYHAVMDCYCGMGWTE--DARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAER 309

Query: 321 LFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           +  EM   G I  D   Y  +++  C+  +MD A  +  EM    I  N+  Y+TMI+G 
Sbjct: 310 VVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGL 369

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K GR+++   +  EM+ +G+  D+ SYNT++  Y + G   +A  +C+ M  +G+    
Sbjct: 370 CKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATT 429

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           +TYN LL G+      D+  R++  M    V+PN ++ STL+D   K G  ++A+ +++E
Sbjct: 430 LTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKE 489

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GR 556
               GL  +V+ ++ +I+ LCK G +  A  LLD M +    P+ +TY ++ D +   G+
Sbjct: 490 TLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQ 549

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQ----------DDKDVQEAGRTDNQIIKVFG 606
             T    ++ +E  LG        ++  +           +D   + + R  +  +  +G
Sbjct: 550 LGTATHLMNKMEH-LGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYG 608

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            L+A    +G     C         ++ +M    + PNV   SA+++   +    ++A++
Sbjct: 609 ALIAGWCKEGNLHEAC--------NLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660

Query: 667 LLEEL 671
           +L++L
Sbjct: 661 VLQKL 665



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 216/464 (46%), Gaps = 64/464 (13%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL+   +      A++ +   +KR    N+     S ++  L + GK + A N+++ 
Sbjct: 432 YNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS--CSTLLDGLFKAGKTEQALNLWKE 489

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG- 277
            L  G    V  F+ +I+   + G   EA  + + MK     P+ +TY  + D   K G 
Sbjct: 490 TLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQ 549

Query: 278 -------------VDFKHVVEIFD--------------------DMLRNGVQPDRITFNS 304
                        + F   VE+F+                    +M   G+ P+ +T+ +
Sbjct: 550 LGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGA 609

Query: 305 LLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
           L+A  C  G L EA  NL+ EMV+ G++ ++F  + L+    K  ++D A  ++ ++   
Sbjct: 610 LIAGWCKEGNLHEAC-NLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNI 668

Query: 364 NISPNV--------------------------VTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           ++ P                            V ++ +I G  K+GR+ DA ++F  ++ 
Sbjct: 669 DMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRN 728

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
                D  +Y++++   A  G  +EA  +   M S+G+  + +TYN+L+ G  K GK   
Sbjct: 729 KRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSR 788

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +F ++++  +SPN +TY+TLID Y K G   EA ++ ++  + G++  V+ YS LI 
Sbjct: 789 AVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIY 848

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            LC  G +E A+ LLD+M +  + PN +TY ++I  + +S   E
Sbjct: 849 GLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNME 892



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 124/516 (24%), Positives = 233/516 (45%), Gaps = 52/516 (10%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           A+  +I+ Y + G   +A  V N M+   +  NL  YN +I+   K G   + V ++  +
Sbjct: 326 AYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLG-RMEEVQKVLQE 384

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G++PD+ ++N+L+    R G    A  +   MV  G+     TYNTLL   C    
Sbjct: 385 MEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHA 444

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A  +   M  + ++PN ++ ST++DG  KAG+ + ALN++ E    G+  + +++NT
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT 504

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           V++   K+GR  EA  +   M+      D++TY  L  GY K G+      +  +M+   
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            +P++  +++ I  +     + +   I  E    GL  ++V Y ALI   CK G +  A 
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEAC 624

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM--CSQD 587
           +L  EM   G+ PNV   ++++  F +    E  VD+    L K     N+D +  CS  
Sbjct: 625 NLYFEMVNNGMNPNVFICSALMSCFYK----EGKVDEANLVLQKL---VNIDMIPGCSIS 677

Query: 588 DKDVQEAGRTDNQI-------------IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
             ++ +     + I             + +FG   + +    K              +F+
Sbjct: 678 TIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKS-------------LFE 724

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDA---------SMLLEELRLFDNQVYGVAHGL 685
            +   +  P+  T+S++++ C+   S ++A         + L   +  +++ +YG+    
Sbjct: 725 SLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLC--- 781

Query: 686 LMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
               +     +A++LF++++    S     YN L D
Sbjct: 782 ----KSGKLSRAVNLFNKLQSKGISPNGITYNTLID 813



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 140/576 (24%), Positives = 252/576 (43%), Gaps = 101/576 (17%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI+ L +LG+++  + + +   + G     Y+++ LI  Y R G  ++A  +   M R
Sbjct: 363 NTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVR 422

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             L    +TYN ++   C    +D    + ++  ML+ GV P+ I+ ++LL    + G  
Sbjct: 423 NGLAATTLTYNTLLKGFCSLHAID--DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A NL+ E + RG+ +++ T+NT+++ +CK  +M  A E++  M      P+ +TY T+
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGI---------------------------------GL 402
            DGY K G+L  A ++ ++M+ LG                                  GL
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL 600

Query: 403 --DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             + V+Y  +++ + K G   EA  +  EM ++G+  +    +AL+  + K+GK DE   
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYS--------------------------KGGLYKEAM 494
           + +++    + P     +  ID  S                          K G   +A 
Sbjct: 661 VLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK 720

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +F   +      D   YS+LI     +G ++ A SL D M   G+ PN++TYNS+I   
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL 780

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            +S              GK   + NL          +Q  G + N I   +  L+ E   
Sbjct: 781 CKS--------------GKLSRAVNLF-------NKLQSKGISPNGI--TYNTLIDEYCK 817

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
           +GK     + +        QKM +  I+P V+T+S ++         E+A  LL++  + 
Sbjct: 818 EGKTTEAFKLK--------QKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQ--MI 867

Query: 675 DNQV---YGVAHGLLMGYRDNIWVQALS-LFDEVKL 706
           +N V   Y     L+ GY  +  ++ +S L+DE+ +
Sbjct: 868 ENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHI 903



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 155/308 (50%), Gaps = 10/308 (3%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+I+   + G +  A N++   +N G    V+  SAL+S + + G   EA  V   +   
Sbjct: 609 ALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNI 668

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           ++ P           C    ++   +  + D +         + +N ++    + G    
Sbjct: 669 DMIP----------GCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIAD 718

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A++LF  + ++    D FTY++L+        +D AF +   M +  ++PN++TY+++I 
Sbjct: 719 AKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIY 778

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  K+G+L  A+N+F++++  GI  + ++YNT++  Y K G+  EA  + ++M   GI+ 
Sbjct: 779 GLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQP 838

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
             +TY+ L+ G   QG  +E  ++ +QM  + V PN +TY TLI  Y K G  +E  +++
Sbjct: 839 TVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLY 898

Query: 498 REFKQAGL 505
            E    GL
Sbjct: 899 DEMHIRGL 906



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 174/364 (47%), Gaps = 27/364 (7%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           +LG++  A ++     + G+  +V  F++ I+ +  +    +   + + M    L PNLV
Sbjct: 546 KLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLV 605

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TY A+I    K G +      ++ +M+ NG+ P+    ++L++   + G  + A  +  +
Sbjct: 606 TYGALIAGWCKEG-NLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQK 664

Query: 325 MVH---------RGIDQDIFT-----------------YNTLLDAICKGAQMDLAFEIMA 358
           +V+           I+ D  +                 +N ++  +CK  ++  A  +  
Sbjct: 665 LVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFE 724

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
            +  K   P+  TYS++I G A +G +D+A ++   M   G+  + ++YN+++    K G
Sbjct: 725 SLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSG 784

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           +   A+ +  +++S GI  + +TYN L+  Y K+GK  E  ++ ++M  + + P ++TYS
Sbjct: 785 KLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYS 844

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            LI      G  +EA+++  +  +  +  + + Y  LI    K+G +E    L DEM   
Sbjct: 845 ILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIR 904

Query: 539 GIRP 542
           G+ P
Sbjct: 905 GLLP 908



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 89/172 (51%), Gaps = 3/172 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++I      G +D A ++ +  L+ G    +  +++LI    +SG    A+++FN ++ 
Sbjct: 739 SSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQS 798

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             + PN +TYN +ID   K G       ++   M+  G+QP  IT++ L+  +C++G + 
Sbjct: 799 KGISPNGITYNTLIDEYCKEG-KTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYME 857

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
           EA + L ++M+   +D +  TY TL+    K   M+   ++  EM  + + P
Sbjct: 858 EAIK-LLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 56/270 (20%), Positives = 114/270 (42%), Gaps = 38/270 (14%)

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
           L+    +++R+F  + +  D++L  A  DA    G + SA+++ D M K G RP++ + N
Sbjct: 133 LFPHLAEVYRDFTFSAVSFDLLL-RAHADA----GQLSSALNVFDGMGKVGCRPSLRSCN 187

Query: 549 SIIDAFGRSAT--TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG 606
            +++   +S        V    R  G   +   +  M     +D    GR    +     
Sbjct: 188 RLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRD----GRVAQAV----- 238

Query: 607 QLVAEKAGQGKKEN----RCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNAC 655
           + V E  G G + N        +  C +G       + + + +  + PNVVT++ ++   
Sbjct: 239 EFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGY 298

Query: 656 SRCNSFEDASMLLEELR-LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASA 714
            +    E+A  +++E++   D  V  VA+G+++    N + Q   + D  ++ +    + 
Sbjct: 299 CKDGRMEEAERVVKEMKETGDIVVDEVAYGMMI----NGYCQRGRMDDATRVRNEMRDAG 354

Query: 715 F------YNALTDMLWHFGQKRGAQLVVLE 738
                  YN + + L   G+    Q V+ E
Sbjct: 355 IHVNLFVYNTMINGLCKLGRMEEVQKVLQE 384


>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 203/400 (50%), Gaps = 17/400 (4%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILG---RLGKVDLAKNIFET 218
            ++  G+RG+   AI  F  A     +K + G+   +  +ILG   +  ++ LA+ +F+ 
Sbjct: 188 FVKAYGDRGDIRGAIHWFHRA-----KKMESGRCLFSYNAILGVFVKANRIMLARAVFDQ 242

Query: 219 ALNEGYGNT-VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
            + EG     V  ++ +I  Y + G  + A +VF+ M     KPNLVTYN +I+   K G
Sbjct: 243 IVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKG 299

Query: 278 VDFKHVVEIFDDMLRN-GVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           +  +  ++I D M       PD +T+ +L+   C RG L EA + +  EMV R  + ++ 
Sbjct: 300 L-MESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYM-EEMVSRNCEPNVL 357

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYN ++  +C    +D A  +M  M    +  NV T+++++ G    G+LDDA     EM
Sbjct: 358 TYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEM 417

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
             LG+  D  +Y  V++ Y K+G+ ++A+ + KEM+S GI     ++NA+     + GK 
Sbjct: 418 VGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKT 477

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG-GLYKEAMQIFREFKQAGLKADVVLYSA 514
           D+   +  QMK    +PN L+YST+ID   K  G   E  +   +  + G   D  +YS 
Sbjct: 478 DKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSW 537

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           L+   C++G  + A+ L  EM   G   N+ ++ + +   
Sbjct: 538 LVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGL 577



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 181/348 (52%), Gaps = 10/348 (2%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           +A +  + AYG  G  + AI  F+  K+      L +YNA++    K          +FD
Sbjct: 183 FAAAKFVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKAN-RIMLARAVFD 241

Query: 289 DMLRNGV-QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            +++ GV +PD  T+ +++    + G+ E A+N+F+EM   G   ++ TYNT+++  CK 
Sbjct: 242 QIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKK 298

Query: 348 AQMDLAFEIMAEMP-AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             M+ A +I+ +M   ++  P+ VTY+T+IDGY K G L++A+    EM       + ++
Sbjct: 299 GLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLT 358

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN ++      G  +EA  +   M  +G++ +  T+ ++L G    GK D+  R  ++M 
Sbjct: 359 YNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMV 418

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              +  +   Y  +++ Y K G   +A+ + +E K  G+   V  ++A+   L ++G  +
Sbjct: 419 GLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTD 478

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIID----AFGRSATTECTVDDVERD 570
            A  +L +M + G  PN ++Y+++ID    A GR    E  VDD+ R+
Sbjct: 479 KAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRN 526



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 154/329 (46%), Gaps = 41/329 (12%)

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSK 486
           K+MES    +   +YNA+LG + K  +    R +F+Q+ K   V P++ TY+T+I  Y K
Sbjct: 209 KKMESG---RCLFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCK 265

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK-EGIRPNVV 545
            G+ + A  +F E    G K ++V Y+ +I+  CK GL+ESA+ ++D+MT+ E   P+ V
Sbjct: 266 MGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTV 322

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
           TY ++ID + +    E  +  +E  + +  E   L                T N II  +
Sbjct: 323 TYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVL----------------TYNAII--Y 364

Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
           G  +     + K+             +  +M    +K NV T ++IL         +DA+
Sbjct: 365 GLCLNGNVDEAKR-------------MMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAA 411

Query: 666 MLLEELRLFDNQVYGVAHGLLMGYRDNIWV--QALSLFDEVKLMDSSTASAFYNALTDML 723
             L+E+     +    A+G+++     I     A+SL  E+K    + + + +NA+  +L
Sbjct: 412 RHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRIL 471

Query: 724 WHFGQKRGAQLVVLEGKRRQVWENVWSES 752
              G+   A L++ + K+     N  S S
Sbjct: 472 VESGKTDKAGLILRQMKQLGCTPNFLSYS 500



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 34/230 (14%)

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
            +  YG +G        F + K       L +Y+ ++ V+ K      A  +F +  + G
Sbjct: 188 FVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEG 247

Query: 505 L-KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           + K DV  Y+ +I   CK G++E+A ++ DEM   G +PN+VTYN++I+ F +    E  
Sbjct: 248 VVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESA 304

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
           +  V++                 + +D      T   +I  + +               R
Sbjct: 305 MKIVDQ---------------MTETEDCMPDTVTYTTLIDGYCK---------------R 334

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
            E+   +   ++M     +PNV+T++AI+       + ++A  ++  +RL
Sbjct: 335 GELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRL 384



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/216 (20%), Positives = 93/216 (43%), Gaps = 2/216 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++  L  +GK+D A    +  +  G      A+  +++ Y + G   +AIS+   MK 
Sbjct: 395 TSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKS 454

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             + P++ ++NAV     + G   K  + I   M + G  P+ +++++++  +C   G  
Sbjct: 455 RGINPSVSSFNAVFRILVESGKTDKAGL-ILRQMKQLGCTPNFLSYSTVIDGLCKAKGRM 513

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
                  ++M   G   D   Y+ L+   C+    D+A  +  EM       N+ ++   
Sbjct: 514 HEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAF 573

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
           + G +   +  +    F EM     G+D   Y  +L
Sbjct: 574 VKGLSAKEKAFEVEKFFEEMSRRCPGIDIHKYRRIL 609


>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 570

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 250/530 (47%), Gaps = 46/530 (8%)

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           T+N +L V  RG  WE ++ +  +M++ GI  D  TY+TL+    +    D A      M
Sbjct: 45  TYNVMLKVLRRGQQWELSQQIAEDMINAGIRPDNITYSTLISCANRCNYQDAAMAWFDRM 104

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
                 P+ VTYSTMID Y K G+ D+A+ ++  +K  G   D+V+Y T++ ++ + G  
Sbjct: 105 HDAQCVPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYGTMVRLFGRAGYI 164

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
             A+ +  EM+ SGI+  +V YN ++   G+ G+     ++F++MK   V PN +T ST+
Sbjct: 165 SAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTV 224

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           +++YS+ G   E + IF   +Q  L  D+++Y+A+I    + GLV  A   L EM + G 
Sbjct: 225 MEIYSRSGKVMEGLGIFHHMRQ-DLACDIIVYNAVIKMCREAGLVPEAEQYLREMVEYGH 283

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
           +PN  TY ++I  + ++                   +     M SQ    + EAG   + 
Sbjct: 284 QPNDWTYRNMISLYAKNGM-----------------AVEAQRMFSQ----LVEAGYQPD- 321

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
            +  +  L+ +  G  K   +  QEIL       +M      P+   +  ILN    C++
Sbjct: 322 -VMSYTSLL-QGYGNAKDYEKV-QEIL------HEMVSANCAPDERLWCVILNLLDACDT 372

Query: 661 FEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQAL--SLFDEVKLMDSSTASAFYNA 718
             +  +L   LR+ +  +  +   +   + +N+ ++ L   L   +  M         N+
Sbjct: 373 DVEFEILRSCLRMCNPTMDNIVGHI---FEENLVLKKLGDGLQSLLSDMAEEAHKPICNS 429

Query: 719 LTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL--DLHL--MSSGAARAMVHAWLLN 774
           L  ++WH G +  A  ++       V+  + ++S +   LHL  +S+GAA   + +WL +
Sbjct: 430 LLQLIWHKGDRNYAFKLLSLFCSSGVYTGLQTKSSIMWSLHLKSLSTGAAHCALLSWLSS 489

Query: 775 IHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEV--LLTGMGAPF 822
           +   + EG ELP    I TG G     +    LR  V +  LL    +PF
Sbjct: 490 VRYAIQEGQELPSRFMIETGVGNQ---LNADELRLVVVISSLLKEFTSPF 536



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 176/348 (50%), Gaps = 3/348 (0%)

Query: 172 WSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAF 231
           W  A+  F + ++ E+  N      + M+ +L R  + +L++ I E  +N G       +
Sbjct: 23  WKVALSLFKW-LQAEQNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRPDNITY 81

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           S LIS   R  Y   A++ F+ M      P+ VTY+ +ID  GK G  +   V +++ + 
Sbjct: 82  STLISCANRCNYQDAAMAWFDRMHDAQCVPDAVTYSTMIDVYGKVG-KYDEAVALYESVK 140

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
           ++G +PD++T+ +++ +  R G   AA ++F+EM   GI      YN ++  + +  +M 
Sbjct: 141 KSGWKPDKVTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMG 200

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A ++  EM    + PN VT ST+++ Y+++G++ + L +F  M+   +  D + YN V+
Sbjct: 201 HALKVFQEMKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHHMR-QDLACDIIVYNAVI 259

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
            +  + G   EA    +EM   G + +  TY  ++  Y K G   E +RMF Q+      
Sbjct: 260 KMCREAGLVPEAEQYLREMVEYGHQPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQ 319

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           P++++Y++L+  Y     Y++  +I  E   A    D  L+  +++ L
Sbjct: 320 PDVMSYTSLLQGYGNAKDYEKVQEILHEMVSANCAPDERLWCVILNLL 367



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 169/316 (53%), Gaps = 3/316 (0%)

Query: 247 AISVFNSMK-RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           A+S+F  ++   N   N+ TYN ++    +G   ++   +I +DM+  G++PD IT+++L
Sbjct: 26  ALSLFKWLQAEQNFNLNIYTYNVMLKVLRRGQ-QWELSQQIAEDMINAGIRPDNITYSTL 84

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           ++  +R    +AA   F+ M       D  TY+T++D   K  + D A  +   +     
Sbjct: 85  ISCANRCNYQDAAMAWFDRMHDAQCVPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGW 144

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            P+ VTY TM+  + +AG +  A+++F EMK  GI    V YN ++S   + GR   AL 
Sbjct: 145 KPDKVTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALK 204

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           V +EM+ +G++ +AVT + ++  Y + GK  E   +F  M+ D ++ +++ Y+ +I +  
Sbjct: 205 VFQEMKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHHMRQD-LACDIIVYNAVIKMCR 263

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           + GL  EA Q  RE  + G + +   Y  +I    KNG+   A  +  ++ + G +P+V+
Sbjct: 264 EAGLVPEAEQYLREMVEYGHQPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVM 323

Query: 546 TYNSIIDAFGRSATTE 561
           +Y S++  +G +   E
Sbjct: 324 SYTSLLQGYGNAKDYE 339


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 197/394 (50%), Gaps = 7/394 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+    LG +  A ++    L  GY       + ++     +G  ++A+   +S+  
Sbjct: 117 SILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVA 176

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                + VTY  +I+   K G+  +   E+   M    V+P+ + +N ++    + GL  
Sbjct: 177 QGFLLDEVTYGTLINGLCKIGLT-REAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVT 235

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            AR+L++++V RGID D+FTY  L+   C   Q      ++ +M  +N++ NV TY+ +I
Sbjct: 236 EARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILI 295

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D   K G L  A +M + M   G   D V++NT++S Y       EA  +       GI 
Sbjct: 296 DALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGIT 355

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  +YN L+ GY K  + DE   +F +M    ++PN++TYS+LID   K G    A ++
Sbjct: 356 PDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWEL 415

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F      G   +V+ Y+ ++DALCK  LV+ A+ L + M + G+ PNV +YN +I+ + +
Sbjct: 416 FSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCK 475

Query: 557 SATTECTVDDVE----RDLGKQKESAN--LDAMC 584
           S   +  ++  E    R+L     + N  +D +C
Sbjct: 476 SKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLC 509



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 196/383 (51%), Gaps = 4/383 (1%)

Query: 179 FAFAVKREERKNDQGKLASAMISILGRL---GKVDLAKNIFETALNEGYGNTVYAFSALI 235
           FAF+V     K      A  + +I+  L   G+V  A    ++ + +G+      +  LI
Sbjct: 131 FAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLI 190

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV 295
           +   + G  +EA  + + M+   ++PN+V YN ++D   K G+      +++ D++  G+
Sbjct: 191 NGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGL-VTEARDLYSDVVGRGI 249

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
            PD  T+  L+      G W     L  +MV R ++ +++TYN L+DA+CK   +  A +
Sbjct: 250 DPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHD 309

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           +   M  +   P++VT++T++ GY     + +A  +F      GI  D  SYN ++  Y 
Sbjct: 310 MRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYC 369

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K  R +EAL +  +M    +  + VTY++L+ G  K G+      +F  +     SPN++
Sbjct: 370 KNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVI 429

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY+ ++D   K  L  +A+++F    + GL  +V  Y+ LI+  CK+  ++ A++L +EM
Sbjct: 430 TYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEM 489

Query: 536 TKEGIRPNVVTYNSIIDAFGRSA 558
            +  + P+ VTYN +ID   +S 
Sbjct: 490 HRRNLVPDSVTYNCLIDGLCKSG 512



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 167/317 (52%), Gaps = 5/317 (1%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G V  A++++   +  G    V+ ++ LI  +   G  +E   +   M   N+  N+ TY
Sbjct: 232 GLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTY 291

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNE 324
           N +IDA C KG +   H  ++ + M+  G +PD +TFN+L++  C    + EA R LF+ 
Sbjct: 292 NILIDALCKKGMLGKAH--DMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEA-RKLFDT 348

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
               GI  D+++YN L+   CK  ++D A  +  +M  K ++PN+VTYS++IDG  K+GR
Sbjct: 349 FAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGR 408

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +  A  +FS +   G   + ++YN +L    K+   ++A+ +   M   G+  +  +YN 
Sbjct: 409 ISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNI 468

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ GY K  + DE   +FE+M    + P+ +TY+ LID   K G    A ++F      G
Sbjct: 469 LINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGG 528

Query: 505 LKADVVLYSALIDALCK 521
              DV+ Y+ L DA  K
Sbjct: 529 PPVDVITYNILFDAFSK 545



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 211/446 (47%), Gaps = 27/446 (6%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
           +V  F+ ++ +  +  +   AIS+   M    + P++VT + +I+  C  G + F     
Sbjct: 77  SVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAF--S 134

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +   +L+ G Q + IT  +++      G    A    + +V +G   D  TY TL++ +C
Sbjct: 135 VLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLC 194

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K      AFE++ +M  + + PNVV Y+ ++DG  K G + +A +++S++   GI  D  
Sbjct: 195 KIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVF 254

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y  ++  +  LG++ E   +  +M    +  +  TYN L+    K+G   +   M   M
Sbjct: 255 TYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLM 314

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
                 P+L+T++TL+  Y       EA ++F  F + G+  DV  Y+ LI   CKN  +
Sbjct: 315 IERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRI 374

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE------CTVDDVERDLGKQKESAN 579
           + A+SL ++M  + + PN+VTY+S+ID   +S            + D          +  
Sbjct: 375 DEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIM 434

Query: 580 LDAMCSQD--DKDVQ------EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
           LDA+C     DK ++      E G T N  +  +  L+        K  R  +     + 
Sbjct: 435 LDALCKIQLVDKAIELFNLMFERGLTPN--VSSYNILINGYC----KSKRIDEA----MN 484

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSR 657
           +F++MH+  + P+ VT++ +++   +
Sbjct: 485 LFEEMHRRNLVPDSVTYNCLIDGLCK 510



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 113/478 (23%), Positives = 210/478 (43%), Gaps = 41/478 (8%)

Query: 275 KGGVD-FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           K G D     V +F  ++     P  + FN +L    +   +  A +L  +M  RGI   
Sbjct: 53  KSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPS 112

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           I T + L++  C    M  AF ++  +  +    N +T +T++ G    G +  AL    
Sbjct: 113 IVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHD 172

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            +   G  LD V+Y T+++   K+G   EA  +  +ME   +R + V YN ++ G  K G
Sbjct: 173 SVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDG 232

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
              E R ++  +    + P++ TY+ LI  +   G ++E  ++  +     +  +V  Y+
Sbjct: 233 LVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYN 292

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV------ 567
            LIDALCK G++  A  + + M + G RP++VT+N+++  +       C  +DV      
Sbjct: 293 ILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGY-------CLYNDVVEARKL 345

Query: 568 -----ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
                E  +     S N+  +    +  + EA       + +F ++  +K          
Sbjct: 346 FDTFAECGITPDVWSYNILIIGYCKNNRIDEA-------LSLFNKMNYKKLAPNIVTYSS 398

Query: 623 RQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA----SMLLEEL 671
             + LC  G       +F  +H     PNV+T++ +L+A  +    + A    +++ E  
Sbjct: 399 LIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERG 458

Query: 672 RLFDNQVYGVAHGLLMGYRDNIWV-QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
              +   Y +   L+ GY  +  + +A++LF+E+   +    S  YN L D L   G+
Sbjct: 459 LTPNVSSYNI---LINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGR 513



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 135/259 (52%), Gaps = 3/259 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L  +G   KA       ++R +R +      + ++S       V  A+ +F+T
Sbjct: 291 YNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVT--FNTLMSGYCLYNDVVEARKLFDT 348

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G    V++++ LI  Y ++    EA+S+FN M    L PN+VTY+++ID   K G 
Sbjct: 349 FAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSG- 407

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
              +  E+F  +   G  P+ IT+N +L    +  L + A  LFN M  RG+  ++ +YN
Sbjct: 408 RISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYN 467

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L++  CK  ++D A  +  EM  +N+ P+ VTY+ +IDG  K+GR+  A  +F+ M   
Sbjct: 468 ILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDG 527

Query: 399 GIGLDRVSYNTVLSIYAKL 417
           G  +D ++YN +   ++K+
Sbjct: 528 GPPVDVITYNILFDAFSKI 546


>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 1627

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 166/325 (51%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            + +I  LG+ G++D A + F     EG        + +I+  G++G   +A+ +F  M+ 
Sbjct: 1294 TELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMET 1353

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                P++VTYN +I A  +       V   F+ M  +G+ P   T++ L+    +    E
Sbjct: 1354 LRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRME 1413

Query: 317  AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
             A  L  EM  +G       Y +L+DA+ K  + DLA E+  E+     S +   Y+ MI
Sbjct: 1414 KAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMI 1473

Query: 377  DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
                KAGRLDDA+NMF EM  LG   D  +YN ++S  A+ G  +EAL   + M+  G  
Sbjct: 1474 KHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCI 1533

Query: 437  KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             D  +YN +L G  K G       M   MK   V P++++Y+T++   S  G+++EA ++
Sbjct: 1534 PDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKL 1593

Query: 497  FREFKQAGLKADVVLYSALIDALCK 521
             +E    G + D++ YS++++A+ K
Sbjct: 1594 MKEMNTLGFEYDLITYSSILEAIGK 1618



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 222/478 (46%), Gaps = 36/478 (7%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK- 255
            S ++ +LG    V  A  IF             A++++I      G  ++   ++N M  
Sbjct: 1153 SDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMST 1212

Query: 256  RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
              +  P+ VTY+A+I A C  G  D    +++ ++M   G+QP    +  L+A+  +   
Sbjct: 1213 EGHCFPDTVTYSALISAFCKLGRRD--SAIQLLNEMKEIGMQPTTKIYTMLIALFFKFND 1270

Query: 315  WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
               A +LF EM H+    D+FTY  L+  + K  ++D A+    EM  +   P+ V  + 
Sbjct: 1271 AHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNN 1330

Query: 375  MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL-SIYAKLGRFEEALLVCKEMESS 433
            MI+   KAGRLDDA+ +F EM+ L      V+YNT++ +++    R  E     + M+ S
Sbjct: 1331 MINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 1390

Query: 434  GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            GI   + TY+ L+ G+ K  + ++   + E+M      P    Y +LID   K   Y  A
Sbjct: 1391 GISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 1450

Query: 494  MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             ++F+E K+    +   +Y+ +I  L K G ++ A+++ DEM K G  P+V  YN+++  
Sbjct: 1451 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 1510

Query: 554  FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
              R+      +D+    + + +E   +         D+       N + K  G   A   
Sbjct: 1511 LARTG----MLDEALSTMRRMQEHGCI--------PDINSYNIILNGLAKTGGPHRA--- 1555

Query: 614  GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                            + +   M +  ++P+VV+++ +L A S    FE+AS L++E+
Sbjct: 1556 ----------------MEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEM 1597



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 179/397 (45%), Gaps = 39/397 (9%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            SA+IS   +LG+ D A  +       G   T   ++ LI+ + +      A+S+F  M+ 
Sbjct: 1224 SALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRH 1283

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               +P++ TY  +I   GK G         F +M R G +PD +  N+++    + G  +
Sbjct: 1284 QYCRPDVFTYTELIRGLGKAG-RIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLD 1342

Query: 317  AARNLFNEM------------------------------------VHRGIDQDIFTYNTL 340
             A  LF EM                                       GI    FTY+ L
Sbjct: 1343 DAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSIL 1402

Query: 341  LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF-LG 399
            +D  CK  +M+ A  ++ EM  K   P    Y ++ID   KA R D A  +F E+K   G
Sbjct: 1403 IDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCG 1462

Query: 400  IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
                RV Y  ++    K GR ++A+ +  EM   G   D   YNAL+ G  + G  DE  
Sbjct: 1463 SSSARV-YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 1521

Query: 460  RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
                +M+     P++ +Y+ +++  +K G    AM++    KQ+ ++ DVV Y+ ++ AL
Sbjct: 1522 STMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGAL 1581

Query: 520  CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
               G+ E A  L+ EM   G   +++TY+SI++A G+
Sbjct: 1582 SHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 1618



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 144/345 (41%), Gaps = 74/345 (21%)

Query: 145  ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
            + ++   + C  D +T+  L+R LG  G   +A   F   ++RE  + D     + MI+ 
Sbjct: 1277 LFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFC-EMQREGCRPDT-VFMNNMINF 1334

Query: 203  LGRLGKVDLAKNIFE------------------TALNE------------------GYGN 226
            LG+ G++D A  +F+                   AL E                  G   
Sbjct: 1335 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 1394

Query: 227  TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG---------- 276
            + + +S LI  + ++   ++A+ +   M      P    Y ++IDA GK           
Sbjct: 1395 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 1454

Query: 277  ---------------GVDFKHV---------VEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
                            V  KH+         + +FD+M + G  PD   +N+L++  +R 
Sbjct: 1455 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLART 1514

Query: 313  GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            G+ + A +    M   G   DI +YN +L+ + K      A E+++ M    + P+VV+Y
Sbjct: 1515 GMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSY 1574

Query: 373  STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
            +T++   + AG  ++A  +  EM  LG   D ++Y+++L    K+
Sbjct: 1575 NTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKV 1619


>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
          Length = 724

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 204/399 (51%), Gaps = 8/399 (2%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
           +Y+F+++ L    +   ++    +A    ++    G+L + +I    + G V+ A +   
Sbjct: 292 NYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLA 351

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                G         A+I+A G +G  +EA ++F  +K   L P    YNA++    K G
Sbjct: 352 MVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTG 411

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
              K    I  +M R+G  PD  T++ L+   +  G WE+AR +  EM   G+  + + +
Sbjct: 412 -SLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVF 470

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           + +L +     +   +F+++ EM    +SP+   Y+ MID + K   LD AL  F  M+ 
Sbjct: 471 SRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRM 530

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  D V++NT++  + K G   +A  + + M+ SG      TYN ++  +G+Q ++++
Sbjct: 531 EGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWED 590

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
           V+ +  +M++  +  N++TY+TL       GL ++A+  FR  +  GLK  V++ ++LI+
Sbjct: 591 VKTLLGKMQSQGLLANVVTYTTL-------GLSEQAINAFRVMRADGLKPSVLVLNSLIN 643

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           A  ++     A S+L  M +  ++P+VVTY +++ A  R
Sbjct: 644 AFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIR 682



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 230/485 (47%), Gaps = 19/485 (3%)

Query: 195 LASAMISILGRLGKVDLAKNIFET-ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           L S +I  LGR      ++ ++E   L++    T   ++ALI A  R+   ++A+++ + 
Sbjct: 227 LYSILIHALGR------SEKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSR 280

Query: 254 MKRYNLKPNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M+R     + V Y+ +I +  +    D   + +I+ ++  + ++ D    N ++   ++ 
Sbjct: 281 MRRDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKS 340

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G    A +    +   G+     T   ++ A+    + + A  I  E+    + P    Y
Sbjct: 341 GDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAY 400

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + ++ GY K G L DA ++ SEM+  G   D  +Y+ ++  YA  GR+E A +V KEME+
Sbjct: 401 NALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEA 460

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           SG+R ++  ++ +L  Y  +GK+ +  ++  +M+   VSP+   Y+ +ID + K      
Sbjct: 461 SGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDH 520

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A+  F   +  G++ D V ++ LID  CK+G    A  L + M + G  P   TYN +I+
Sbjct: 521 ALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMIN 580

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ----L 608
           +FG     E    DV+  LGK +    L  + +     + E      ++++  G     L
Sbjct: 581 SFGEQERWE----DVKTLLGKMQSQGLLANVVTYTTLGLSEQAINAFRVMRADGLKPSVL 636

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
           V         E+R   E   +L   Q M +  +KP+VVT++ ++ A  R   F+    + 
Sbjct: 637 VLNSLINAFGEDRRDAEAFSVL---QYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVY 693

Query: 669 EELRL 673
           EE+ L
Sbjct: 694 EEMTL 698



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 167/350 (47%), Gaps = 33/350 (9%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+I+ LG  G+ + A+ IFE     G      A++AL+  Y ++G  ++A S+ + M+R 
Sbjct: 367 AVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERS 426

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
              P+  TY+ +IDA    G  ++    +  +M  +GV+P+   F+ +LA     G W+ 
Sbjct: 427 GFSPDEHTYSLLIDAYANAG-RWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQK 485

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           +  +  EM + G+  D   YN ++D   K   +D A      M  + + P+ VT++T+ID
Sbjct: 486 SFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLID 545

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            + K+G  + A  +F  M+  G      +YN +++ + +  R+E+   +  +M+S G+  
Sbjct: 546 CHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLA 605

Query: 438 DAVTY----------------------------NALLGGYGKQGKYDEVRRMFEQMKADC 469
           + VTY                            N+L+  +G+  +  E   + + MK + 
Sbjct: 606 NVVTYTTLGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKEND 665

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL----KADVVLYSAL 515
           + P+++TY+TL+    +   + +   ++ E   +G     KA  +L SAL
Sbjct: 666 LKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAMLRSAL 715



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 18/265 (6%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGK---LASAM 199
           +LK+ E      + Y F  +L    +RG+W K+ Q     V RE R +         + M
Sbjct: 454 VLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQ-----VLREMRNSGVSPDRHFYNVM 508

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I   G+   +D A   F+    EG       ++ LI  + +SG+  +A  +F +M+    
Sbjct: 509 IDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGC 568

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            P   TYN +I++ G+    ++ V  +   M   G+  + +T+ +L       GL E A 
Sbjct: 569 SPCTTTYNIMINSFGEQE-RWEDVKTLLGKMQSQGLLANVVTYTTL-------GLSEQAI 620

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           N F  M   G+   +   N+L++A  +  +   AF ++  M   ++ P+VVTY+T++   
Sbjct: 621 NAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKAL 680

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDR 404
            +  + D    ++ EM   G   DR
Sbjct: 681 IRVEKFDKVPAVYEEMTLSGCTPDR 705


>gi|115456295|ref|NP_001051748.1| Os03g0824100 [Oryza sativa Japonica Group]
 gi|113550219|dbj|BAF13662.1| Os03g0824100, partial [Oryza sativa Japonica Group]
          Length = 691

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 158/625 (25%), Positives = 280/625 (44%), Gaps = 70/625 (11%)

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDR--ITFNSLLAVCSRGGLWEAARNL 321
           ++Y ++I A  +  +  +   E+ D M  +GV P    + F+ LL              L
Sbjct: 13  LSYTSLIAAYARNAL-HEEARELLDQMKASGVAPTDPPVPFDMLLG-------------L 58

Query: 322 FNEMVHR---GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           F EM H     +  D+ TYNTLL A    A  D +  ++  M    + P+  +Y  ++D 
Sbjct: 59  FAEMRHDPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLEAGVLPDTASYRHIVDA 118

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           +A AG L     +F+EM   G   D  +Y  ++  +  +G   EA+ V ++M++ G    
Sbjct: 119 FAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAEAVAVLRQMQADGCPPT 178

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           A TY  LL  YG+QG++D VR +F +M+   V P+  TY+ L  V+  GG +KE +++F+
Sbjct: 179 AATYRVLLDLYGRQGRFDGVRELFREMRT-TVPPDTATYNVLFRVFGDGGFFKEVVELFQ 237

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +   + ++ D+     ++ A  + GL E A  +LD +T EG+ P    Y  +++A G +A
Sbjct: 238 DMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTGLVEALGHAA 297

Query: 559 TTEC------------------TVDDVERDLGK----QKESANLDAMCS----QDDKDVQ 592
             E                   T + +     K    Q+  A    M +    Q DKD  
Sbjct: 298 MYEEAYVAFNMMTEIGSLPTIETYNALANAFAKGGLFQEAEAIFSRMTNNAAIQKDKDSF 357

Query: 593 EA-------GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV-------FQKMHK 638
           +A       G   +  +K + ++   +    ++         CI GV       F+++  
Sbjct: 358 DALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQS 417

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL-FDNQVYGVAHGLLMGYRDNI--WV 695
           +   P+++ +  +L+  +R + + DA  LLEE++    +  + V   ++ G  D+   W 
Sbjct: 418 MVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASMIKGEYDDDSNWQ 477

Query: 696 QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL- 754
               + D   L     +  F+NAL D+LW FGQK  A  V+ +  +  ++  ++ ++ L 
Sbjct: 478 MVEYVLDNSNLEGCDYSLRFFNALLDVLWWFGQKGRAARVLDQALKYGLFPELFRDTKLV 537

Query: 755 ---DLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLS--ILTGWGKHSKVVGDGALRR 809
              D+H MS G +   V  WL  ++  +    +LP+L S  +L G  + S V     + +
Sbjct: 538 WSADVHRMSVGGSLVAVSVWLNKLYDRLKGDEDLPQLASVVVLRGQMEKSTVTRGLPIAK 597

Query: 810 AVEVLLTG-MGAPFWVANCNLGRFI 833
            V   L   + + F     N GR I
Sbjct: 598 VVYSFLNDTLSSSFHYPKWNKGRII 622



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 154/330 (46%), Gaps = 3/330 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +     +F      G+     A+  L+ A+   G   EA++V   M+     P   TY
Sbjct: 123 GNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAEAVAVLRQMQADGCPPTAATY 182

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
             ++D  G+ G  F  V E+F +M R  V PD  T+N L  V   GG ++    LF +M+
Sbjct: 183 RVLLDLYGRQG-RFDGVRELFREM-RTTVPPDTATYNVLFRVFGDGGFFKEVVELFQDML 240

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
           H  ++ DI T   ++ A  +G   + A E++  +  + + P    Y+ +++    A   +
Sbjct: 241 HSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTGLVEALGHAAMYE 300

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM-ESSGIRKDAVTYNAL 445
           +A   F+ M  +G      +YN + + +AK G F+EA  +   M  ++ I+KD  +++AL
Sbjct: 301 EAYVAFNMMTEIGSLPTIETYNALANAFAKGGLFQEAEAIFSRMTNNAAIQKDKDSFDAL 360

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +  Y +  + D+  + + +M+    +P+  +   +++ Y   G+  E+ + F E +    
Sbjct: 361 IEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSMVT 420

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEM 535
              ++ Y  ++    +N     A  LL+EM
Sbjct: 421 VPSIIAYCMMLSLYARNDRWTDAYDLLEEM 450



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 4/239 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L R  G+ G + + ++ F   +   E + D     + M++  GR G  + A+ + + 
Sbjct: 216 YNVLFRVFGDGGFFKEVVELFQ-DMLHSEVEPDIDTCENVMVAC-GRGGLHEDAREVLDY 273

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              EG   T  A++ L+ A G +   +EA   FN M      P + TYNA+ +A  KGG+
Sbjct: 274 ITTEGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKGGL 333

Query: 279 DFKHVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            F+    IF  M  N  +Q D+ +F++L+    +G   + A   + EM     + D  + 
Sbjct: 334 -FQEAEAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSL 392

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
             +L+A C    +D + E   E+ +    P+++ Y  M+  YA+  R  DA ++  EMK
Sbjct: 393 EGVLNAYCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMK 451



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/316 (22%), Positives = 134/316 (42%), Gaps = 46/316 (14%)

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR--VSYNTVLSI 413
           +  ++P++  S   ++Y+++I  YA+    ++A  +  +MK  G+      V ++ +L +
Sbjct: 1   VFHDLPSE--SRTALSYTSLIAAYARNALHEEARELLDQMKASGVAPTDPPVPFDMLLGL 58

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           +A++          +   S  +R D  TYN LL     +   D+   +   M    V P+
Sbjct: 59  FAEM----------RHDPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLEAGVLPD 108

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
             +Y  ++D ++  G      ++F E    G   D   Y  L++A    G    AV++L 
Sbjct: 109 TASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAEAVAVLR 168

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
           +M  +G  P   TY  ++D +GR         D  R+L ++  +             V  
Sbjct: 169 QMQADGCPPTAATYRVLLDLYGRQGRF-----DGVRELFREMRTT------------VPP 211

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
              T N + +VFG       G   KE         ++ +FQ M   +++P++ T   ++ 
Sbjct: 212 DTATYNVLFRVFGD------GGFFKE---------VVELFQDMLHSEVEPDIDTCENVMV 256

Query: 654 ACSRCNSFEDASMLLE 669
           AC R    EDA  +L+
Sbjct: 257 ACGRGGLHEDAREVLD 272


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 196/416 (47%), Gaps = 45/416 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNT--VYAFSALISAYGRSGYCQEAISVFNSM 254
           + +IS L + G ++ A+ + E  + +G  +   +  ++ LI+A+ R+   +EA +    M
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKM 195

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGG 313
           K   + P+++T N ++    K G D +  +EI D M   G  PD IT+NS++ A+C  G 
Sbjct: 196 KAAGINPDVLTCNILVSGICKDG-DVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGK 254

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           + EAA  L           D+ T+NTLLD  CK   +  A E++ EM  +NI P+V+TY+
Sbjct: 255 VVEAAEILKT----MSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT 310

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +++G  + G++  A  +  E+   G   D ++Y +++    K G  EEA  + KEM   
Sbjct: 311 ILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVR 370

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G R   V Y++L+ GY + G   + R +  +M +  + P L TY+ ++    K G   +A
Sbjct: 371 GCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKA 430

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI------------- 540
           + +  +    G   DVV Y+ LID LCK   V  A  L DEM   G              
Sbjct: 431 VSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFG 490

Query: 541 ----------------------RPNVVTYNSIIDAFGRSATTE--CTVDDVERDLG 572
                                  PNVV Y S+ID   +S   +  C V D  R  G
Sbjct: 491 LCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQG 546



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 227/477 (47%), Gaps = 37/477 (7%)

Query: 216 FETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           F  AL+E      VY F+ LI    + G   +A+ +F +M+   +KP +VTYN VI    
Sbjct: 84  FLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLC 143

Query: 275 KGGVDFKHVVEIFDDMLRNGVQ--PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           K G + +   E+ ++M+R G +  PD +T+N+L+    R      A     +M   GI+ 
Sbjct: 144 KSG-NLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINP 202

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D+ T N L+  ICK   ++ A EI+  M      P+V+TY+++I     AG++ +A  + 
Sbjct: 203 DVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI- 261

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
             +K +    D V++NT+L  + K G    AL V +EM    I  D +TY  L+ G  + 
Sbjct: 262 --LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRV 319

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G+      + E++      P+++ Y++L+D   K G  +EA ++ +E    G +  VV+Y
Sbjct: 320 GQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMY 379

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV----DDVE 568
           S+L+   C+ G V  A  +L EM    + P + TYN ++    +  +    V    D V 
Sbjct: 380 SSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVA 439

Query: 569 RDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
           R       + N  +D +C  +   V+EA             L  E A +G   N      
Sbjct: 440 RGYVPDVVTYNTLIDGLCKAN--RVREA-----------CDLADEMASRGCFPNDVTLGS 486

Query: 627 ----LCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
               LC +G       +  +M + +  PNVV ++++++   + +  +DA M+L+ +R
Sbjct: 487 VVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMR 543



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 189/360 (52%), Gaps = 7/360 (1%)

Query: 205 RLGKVDLAKNIFETA-LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
           R  + DLA   F+ A   +GY + V++++ L+    +SG+      V+  +      PNL
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           VT+  +I    K G   +  +E    +    V PD   FN L+    + G  + A  LF 
Sbjct: 63  VTFKILIRGNCKAGQAMR-ALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFE 121

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK--NISPNVVTYSTMIDGYAK 381
            M    +  +I TYNT++  +CK   ++ A E++ EM  K    +P++VTY+T+I+ + +
Sbjct: 122 NMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYR 181

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           A R+ +A     +MK  GI  D ++ N ++S   K G  EEAL +   M+ +G   D +T
Sbjct: 182 ASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVIT 241

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN+++      GK  E   + + M     SP+L+T++TL+D + K G+   A+++  E  
Sbjct: 242 YNSIIHALCVAGKVVEAAEILKTMSC---SPDLVTFNTLLDGFCKAGMLPRALEVLEEMC 298

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +  +  DV+ Y+ L++ LC+ G V+ A  LL+E+ ++G  P+V+ Y S++D   +S   E
Sbjct: 299 RENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIE 358



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 201/443 (45%), Gaps = 59/443 (13%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L + G  D A  +FE   +      +  ++ +IS   +SG  ++A  +   M R
Sbjct: 101 NVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIR 160

Query: 257 YNLK--PNLVTYNAVIDA------------------------------------CGKGGV 278
              K  P++VTYN +I+A                                    C  G  
Sbjct: 161 KGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDG-- 218

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           D +  +EI D M   G  PD IT+NS++ A+C  G + EAA  L           D+ T+
Sbjct: 219 DVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKT----MSCSPDLVTF 274

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           NTLLD  CK   +  A E++ EM  +NI P+V+TY+ +++G  + G++  A  +  E+  
Sbjct: 275 NTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVR 334

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   D ++Y +++    K G  EEA  + KEM   G R   V Y++L+ GY + G   +
Sbjct: 335 QGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHK 394

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            R +  +M +  + P L TY+ ++    K G   +A+ +  +    G   DVV Y+ LID
Sbjct: 395 AREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLID 454

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD---VERDLGKQ 574
            LCK   V  A  L DEM   G  PN VT  S++    R       VDD   +  ++ ++
Sbjct: 455 GLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVG----RVDDAWSLVVEMSRK 510

Query: 575 KESAN-------LDAMCSQDDKD 590
           + + N       +D +C  D  D
Sbjct: 511 RHAPNVVVYTSLIDGLCKSDRMD 533



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 178/368 (48%), Gaps = 6/368 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  L   GKV  A  I +T         +  F+ L+  + ++G    A+ V   M R
Sbjct: 243 NSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 299

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            N+ P+++TY  +++  C  G V       + ++++R G  PD I + SL+    + G  
Sbjct: 300 ENILPDVITYTILVNGLCRVGQVQVAFY--LLEEIVRQGYIPDVIAYTSLVDGLCKSGEI 357

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  L  EM  RG    +  Y++L+   C+   +  A EI+AEM + N+ P + TY+ +
Sbjct: 358 EEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIV 417

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G  K G +  A+++ S++   G   D V+YNT++    K  R  EA  +  EM S G 
Sbjct: 418 LGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGC 477

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + VT  +++ G  + G+ D+   +  +M     +PN++ Y++LID   K     +A  
Sbjct: 478 FPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACM 537

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +    +  G+  D   Y  LI ++   G V  A+++ DEM   G  P+  T  ++ +A  
Sbjct: 538 VLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAM 597

Query: 556 RSATTECT 563
            ++  E T
Sbjct: 598 SNSVFEWT 605



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 168/347 (48%), Gaps = 40/347 (11%)

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   D+ +YN LLD + K        ++  ++     SPN+VT+  +I G  KAG+   A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           L     +    +  D   +N ++    K G  ++A+ + + MESS ++ + VTYN ++ G
Sbjct: 82  LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141

Query: 449 YGKQGKYDEVRRMFEQM--KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
             K G  ++ R + E+M  K    +P+++TY+TLI+ + +    +EA     + K AG+ 
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            DV+  + L+  +CK+G VE A+ +LD M   G  P+V+TYNSII A        C    
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHAL-------CVA-- 252

Query: 567 VERDLGKQKESAN-LDAM-CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
                GK  E+A  L  M CS D         T N ++  F      KAG   +      
Sbjct: 253 -----GKVVEAAEILKTMSCSPDLV-------TFNTLLDGFC-----KAGMLPRA----- 290

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                L V ++M +  I P+V+T++ ++N   R    + A  LLEE+
Sbjct: 291 -----LEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 332



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 180/437 (41%), Gaps = 57/437 (13%)

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           E  G + D  +YN LL    K G +    ++++ +     SPNL+T+  LI    K G  
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             A++  R   +  +  DV +++ LI  L K+G  + AV L + M    ++P +VTYN++
Sbjct: 79  MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESA-----------------NLDAMCSQDDKDVQE 593
           I    +S   E   + +E  + K  +SA                  +   C+  +K ++ 
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREK-MKA 197

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
           AG   N  +     LV+     G  E          L +   M      P+V+T+++I++
Sbjct: 198 AGI--NPDVLTCNILVSGICKDGDVEEA--------LEILDGMKLAGPVPDVITYNSIIH 247

Query: 654 ACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTA 712
           A        +A+ +L+ +    + V    + LL G+ +  +  +AL + +E+   +    
Sbjct: 248 ALCVAGKVVEAAEILKTMSCSPDLV--TFNTLLDGFCKAGMLPRALEVLEEMCRENILPD 305

Query: 713 SAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWL 772
              Y  L + L   GQ + A  ++ E  R+    +V + + L   L  SG          
Sbjct: 306 VITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGE--------- 356

Query: 773 LNIHSIVFEGHELPKLLSI---LTGWGKHSKVVGD----GALRRAVEVLL----TGMGAP 821
                 + E H+L K +S+    TG   +S +V      G + +A E+L       M  P
Sbjct: 357 ------IEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPP 410

Query: 822 FWVANCNLGRFISTGPM 838
            +  N  LG  I  G +
Sbjct: 411 LFTYNIVLGGLIKDGSI 427


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 141/543 (25%), Positives = 255/543 (46%), Gaps = 45/543 (8%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I    R+ + +LA  +F   L  G G  V +++ LI  + + G   +A  +F  M   +
Sbjct: 128 LIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQS 187

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           + P++VTYN++ID   K     K +V+   + + M+  G++P+  T+NSL+   S  G+W
Sbjct: 188 VSPDVVTYNSLIDGLCKT----KEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMW 243

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + +  +F EM   G+   +   N+ + A+C+  ++  A +I   M  K   PN+++YST+
Sbjct: 244 KESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTL 303

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + GYA  G   +  ++ + M   GI  +   +N +++ YA+ G  ++A+L+ ++M++ G+
Sbjct: 304 LHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGM 363

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VT+  ++    + G+ D+    F  M    V P+   Y  LI      G   +A +
Sbjct: 364 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKE 423

Query: 496 IFREFKQAGLKADVVLY-SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +  E     +    V Y S++I+ L K G V     ++D M + G RPNVVT+NS+++ +
Sbjct: 424 LISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGY 483

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
                  C V ++E         A LDAM S         G   N  I  +G LV     
Sbjct: 484 -------CLVGNMEEAF------ALLDAMAS--------IGIEPNCYI--YGTLVDGYCK 520

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL--- 671
            G+ ++         L VF+ M    +KP  V ++ IL+   +      A  +  E+   
Sbjct: 521 NGRIDDA--------LTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIES 572

Query: 672 -RLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKR 730
                 Q YGV  G L   R+N   +A  L +++  M+       +N +   +   G+++
Sbjct: 573 GTTVSIQTYGVVLGGLC--RNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQ 630

Query: 731 GAQ 733
            A+
Sbjct: 631 EAK 633



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/496 (24%), Positives = 232/496 (46%), Gaps = 41/496 (8%)

Query: 247 AISVFNSMKRYNLK------PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
           A+ +F  M R+         P + TYN +ID C +     +  + +F  +LR G+ PD  
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILID-CYRRMHRPELALAVFGRLLRTGLGPDVC 158

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           ++N+L+   S+ G  + A  LF +M+ + +  D+ TYN+L+D +CK  +M  +  ++ +M
Sbjct: 159 SYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQM 218

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
               I PN  TY+++I GY+ AG   +++ +F EM   G+    V+ N+ +    +  R 
Sbjct: 219 VDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRI 278

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           +EA  +   M   G + + ++Y+ LL GY  +G +  +  +   M +  + PN   ++ L
Sbjct: 279 KEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNIL 338

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I+ Y++ G+  +AM IF + +  G+  D V ++ +I +LC+ G ++ A+   + M   G+
Sbjct: 339 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 398

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
            P+   Y  +I                  +L K KE      +    +KD+   G     
Sbjct: 399 PPSEAVYRCLIQGCCNHG-----------ELVKAKE-----LISEMMNKDIPPPG----- 437

Query: 601 IIKVFGQLVAEKAGQGK-KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
            +K F  ++     +G+  E +          +   M +   +PNVVTF++++       
Sbjct: 438 -VKYFSSIINNLFKEGRVAEGK---------DIMDLMVQTGQRPNVVTFNSLMEGYCLVG 487

Query: 660 SFEDASMLLEELRLFDNQVYGVAHGLLM-GYRDNIWV-QALSLFDEVKLMDSSTASAFYN 717
           + E+A  LL+ +     +     +G L+ GY  N  +  AL++F ++        S  YN
Sbjct: 488 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYN 547

Query: 718 ALTDMLWHFGQKRGAQ 733
            +   L+   +   A+
Sbjct: 548 IILHGLFQARRTTAAK 563



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 218/479 (45%), Gaps = 39/479 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    + G+VD A  +F   + +     V  +++LI    ++    ++  V   M  
Sbjct: 161 NTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVD 220

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++PN  TYN++I      G+ +K  V +F +M  +G+ P  +  NS +    R    +
Sbjct: 221 AGIRPNNKTYNSLIYGYSTAGM-WKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIK 279

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A+++F+ MV +G   +I +Y+TLL              ++  M +K I PN   ++ +I
Sbjct: 280 EAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILI 339

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           + YA+ G +D A+ +F +M+  G+  D V++ TV+S   ++GR ++AL     M   G+ 
Sbjct: 340 NAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVP 399

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMF-EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
                Y  L+ G    G+  + + +  E M  D   P +  +S++I+   K G   E   
Sbjct: 400 PSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKD 459

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           I     Q G + +VV +++L++  C  G +E A +LLD M   GI PN   Y +++D + 
Sbjct: 460 IMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYC 519

Query: 556 RSATTECTVDD---VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
           ++      +DD   V RD+                 K V+      N I+   G   A +
Sbjct: 520 KNG----RIDDALTVFRDMLH---------------KGVKPTSVLYNIILH--GLFQARR 558

Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               KK             +F +M +     ++ T+  +L    R N  ++A+MLLE+L
Sbjct: 559 TTAAKK-------------MFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKL 604



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 168/361 (46%), Gaps = 2/361 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+   R G +D A  IFE   N+G       F+ +IS+  R G   +A+  FN M    
Sbjct: 338 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 397

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT-FNSLLAVCSRGGLWEA 317
           + P+   Y  +I  C   G +     E+  +M+   + P  +  F+S++    + G    
Sbjct: 398 VPPSEAVYRCLIQGCCNHG-ELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAE 456

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
            +++ + MV  G   ++ T+N+L++  C    M+ AF ++  M +  I PN   Y T++D
Sbjct: 457 GKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 516

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GY K GR+DDAL +F +M   G+    V YN +L    +  R   A  +  EM  SG   
Sbjct: 517 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTV 576

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
              TY  +LGG  +    DE   + E++ A  V  +++T++ +I    K G  +EA ++F
Sbjct: 577 SIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELF 636

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
                 GL   V  Y+ +I  L K    E A +L   + K G  P+    N I+    + 
Sbjct: 637 AAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKK 696

Query: 558 A 558
           A
Sbjct: 697 A 697



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 163/340 (47%), Gaps = 4/340 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L++   N GE  KA +  +  +  ++      K  S++I+ L + G+V   K+I + 
Sbjct: 405 YRCLIQGCCNHGELVKAKELIS-EMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDL 463

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +  G    V  F++L+  Y   G  +EA ++ ++M    ++PN   Y  ++D  C  G 
Sbjct: 464 MVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGR 523

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D    + +F DML  GV+P  + +N +L    +     AA+ +F+EM+  G    I TY
Sbjct: 524 ID--DALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTY 581

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             +L  +C+    D A  ++ ++ A N+  +++T++ +I    K GR  +A  +F+ +  
Sbjct: 582 GVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAIST 641

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+     +YN ++S   K   +EEA  +   +E SG   D+   N ++    K+ +  +
Sbjct: 642 YGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAK 701

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
                  +  + ++    T S L  ++S+ G  +E +++ 
Sbjct: 702 ASNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKLL 741


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 192/382 (50%), Gaps = 21/382 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L    KV+ A ++FE     G   +VY ++ LI ++ ++G  Q+A   F+ M  
Sbjct: 464 SKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLH 523

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               PN+VTY A+I A  K         E+F+ ML  G +P+ +T+ +L+    + G  E
Sbjct: 524 KGCTPNVVTYTALIHAYLKAK-QMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIE 582

Query: 317 AARNLFNEMVHRG------IDQ------------DIFTYNTLLDAICKGAQMDLAFEIMA 358
            A  ++  M  RG      +D+            ++ TY  L+D +CK  ++  A E++ 
Sbjct: 583 KACQIYARM--RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLD 640

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
            M A    PN + Y  +IDG+ K G+L DA  +F++M   G   +  +Y++ +    K  
Sbjct: 641 TMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDN 700

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           R +  L V  +M  +    + V Y  ++ G  K GK DE  ++  +M+    +PN++TY+
Sbjct: 701 RLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYT 760

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            +ID + K G  ++ +++FR+    G   + + Y  LI+  C NGL++ A  LLDEM + 
Sbjct: 761 AMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQT 820

Query: 539 GIRPNVVTYNSIIDAFGRSATT 560
               +++++  II+ F +   T
Sbjct: 821 YWPKHILSHRKIIEGFSQEFIT 842



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 182/370 (49%), Gaps = 19/370 (5%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           +DL +  +   L+ G        S        +G   +A  +   M      P+  TY+ 
Sbjct: 406 LDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSK 465

Query: 269 VID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           VI   C    V+      +F++M RNG+ P   T+  L+    + GL + AR  F+EM+H
Sbjct: 466 VIGFLCDASKVE--KAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLH 523

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           +G   ++ TY  L+ A  K  QM +A E+   M  +   PNVVTY+ +IDG+ KAG+++ 
Sbjct: 524 KGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEK 583

Query: 388 ALNMFSEM----------KFLGI------GLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           A  +++ M          K+  +      G + ++Y  ++    K  R +EA  +   M 
Sbjct: 584 ACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTML 643

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           + G   + + Y+A++ G+ K GK  + + +F +M     SPNL TYS+ ID   K     
Sbjct: 644 AHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLD 703

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             +++  +  +     +VV+Y+ ++D LCK G  + A  L+ +M ++G  PNVVTY ++I
Sbjct: 704 LVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMI 763

Query: 552 DAFGRSATTE 561
           D FG+S   E
Sbjct: 764 DGFGKSGKIE 773



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 139/562 (24%), Positives = 248/562 (44%), Gaps = 65/562 (11%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G++   K I    + EG       F++LI AY +S     A  +F  M +   +P  +
Sbjct: 326 RKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 385

Query: 265 TYNAVI-DACG---KGGVDFKHVVE-IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            YN  I   C    +   D   +VE  + +ML  GV  +++  ++        G ++ A 
Sbjct: 386 VYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAF 445

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            +  EM+ +G   D  TY+ ++  +C  ++++ AF +  EM    I P+V TY+ +ID +
Sbjct: 446 KIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSF 505

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            KAG +  A   F EM   G   + V+Y  ++  Y K  +   A  + + M   G + + 
Sbjct: 506 CKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNV 565

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKAD----------------CVSPNLLTYSTLIDV 483
           VTY AL+ G+ K G+ ++  +++ +M+ D                C  PN++TY  L+D 
Sbjct: 566 VTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDG 625

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K    KEA ++       G + + ++Y A+ID  CK G ++ A  +  +M++ G  PN
Sbjct: 626 LCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPN 685

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN----------LDAMCSQDDKD--- 590
           + TY+S ID   +       +D V + L K  E++           +D +C     D   
Sbjct: 686 LYTYSSFIDCLFKDNR----LDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAY 741

Query: 591 -----VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
                ++E G   N +   +  ++      GK E          L +F+ M      PN 
Sbjct: 742 KLMLKMEEKGCNPNVV--TYTAMIDGFGKSGKIEQ--------CLELFRDMCSKGCAPNF 791

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNI------WVQALS 699
           +T+  ++N C      ++A  LL+E++    Q Y   H  ++ +R  I      ++ ++ 
Sbjct: 792 ITYRVLINHCCSNGLLDEAYKLLDEMK----QTYWPKH--ILSHRKIIEGFSQEFITSIG 845

Query: 700 LFDEVKLMDSSTASAFYNALTD 721
           L DE+   +S    + Y  L D
Sbjct: 846 LLDELSENESVPVDSLYRILID 867



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 159/673 (23%), Positives = 285/673 (42%), Gaps = 63/673 (9%)

Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS-----AMISILGRLGKVDLAKNI 215
           FL+R+    G W+ A++          R  D G   S     A+I +  R  K+D A  +
Sbjct: 181 FLVRKCCRNGWWNMALEELG-------RLKDFGYKPSQTTYNALIQVFLRADKLDTAYLV 233

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
               L+  +    Y  S    +  + G C+EA  + +  +  +  P+ V YN ++    +
Sbjct: 234 KREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAE--DFVPDTVFYNRMVSGLCE 291

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
             + F+  ++I   M  +   P+ +T+  LL+ C R G     + + + M+  G   +  
Sbjct: 292 ASL-FEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNRE 350

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK------AGRLDDAL 389
            +N+L+ A CK      A+++  +M      P  + Y+  I           +  LD   
Sbjct: 351 IFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVE 410

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
             +SEM  LG+ L++V+ +         G+F++A  +  EM   G   D  TY+ ++G  
Sbjct: 411 KAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFL 470

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
               K ++   +FE+MK + + P++ TY+ LID + K GL ++A + F E    G   +V
Sbjct: 471 CDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNV 530

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           V Y+ALI A  K   +  A  L + M  EG +PNVVTY ++ID   ++   E       R
Sbjct: 531 VTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYAR 590

Query: 570 DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ--EIL 627
             G   ES+++D     D  + +         +  +G LV        K NR ++  E+L
Sbjct: 591 MRG-DIESSDMDKYFKLDHNNCEGPN------VITYGALVDGLC----KANRVKEAHELL 639

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL--RLFDNQVYGVAHGL 685
                   M     +PN + + A+++   +    +DA  +  ++  R +   +Y  +  +
Sbjct: 640 ------DTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFI 693

Query: 686 LMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVW 745
              ++DN     L +  ++     +     Y  + D L   G+   A  ++L+ + +   
Sbjct: 694 DCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCN 753

Query: 746 ENVWS--------------ESCLDLH--LMSSGAARAMVHAWLLNIHSIVFEG--HELPK 787
            NV +              E CL+L   + S G A   +   +L I+     G   E  K
Sbjct: 754 PNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVL-INHCCSNGLLDEAYK 812

Query: 788 LLSIL--TGWGKH 798
           LL  +  T W KH
Sbjct: 813 LLDEMKQTYWPKH 825



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/483 (24%), Positives = 232/483 (48%), Gaps = 51/483 (10%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-- 254
            +A+I    +  ++ +A  +FE  L EG    V  ++ALI  + ++G  ++A  ++  M  
Sbjct: 534  TALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRG 593

Query: 255  --------KRYNLK------PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
                    K + L       PN++TY A++D   K     K   E+ D ML +G +P++I
Sbjct: 594  DIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKAN-RVKEAHELLDTMLAHGCEPNQI 652

Query: 301  TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
             +++++    + G  + A+ +F +M  RG   +++TY++ +D + K  ++DL  +++++M
Sbjct: 653  VYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKM 712

Query: 361  PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
               + +PNVV Y+ M+DG  K G+ D+A  +  +M+  G   + V+Y  ++  + K G+ 
Sbjct: 713  LENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKI 772

Query: 421  EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
            E+ L + ++M S G   + +TY  L+      G  DE  ++ ++MK      ++L++  +
Sbjct: 773  EQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKI 832

Query: 481  IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
            I+ +S+   +  ++ +  E  +        LY  LID   K G +E A+ LL+E++    
Sbjct: 833  IEGFSQE--FITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPS 890

Query: 541  RP--NVVTYNSIIDAFGRSATTECTVD--------DVERDLG-------------KQKES 577
                N   Y S+I+    ++  +  ++        +V  +L              K +E+
Sbjct: 891  HAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEA 950

Query: 578  ANL-DAMCSQDDKDVQE--AGRTDNQIIKVFGQLVAEKAGQGKK-ENRCRQ-----EILC 628
              L D++C  D   +QE   GRT+  +  V   +V  + G  ++   RC        ILC
Sbjct: 951  LQLSDSICQMDIHWLQEKATGRTEEMVKLVIAAMVEAETGVSEEILERCSSYSINVRILC 1010

Query: 629  ILG 631
              G
Sbjct: 1011 FFG 1013



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 120/280 (42%), Gaps = 24/280 (8%)

Query: 278 VDFKHVVEIFDD---MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           V  K ++EI DD   +LR          N L+  C R G W  A      +   G     
Sbjct: 159 VPLKFLMEIKDDDHELLRR-------LLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQ 211

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TYN L+    +  ++D A+ +  EM +     +  T S       K G+  +A ++  E
Sbjct: 212 TTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDE 271

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
            +      D V YN ++S   +   FEEA+ +   M SS    + VTY  LL G  ++G+
Sbjct: 272 AE--DFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQ 329

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
               +R+   M  +   PN   +++LI  Y K   Y  A ++F++  + G +   ++Y+ 
Sbjct: 330 LGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNI 389

Query: 515 LIDALCKN---------GLVESAVSLLDEMTKEGIRPNVV 545
            I ++C N          LVE A S   EM   G+  N V
Sbjct: 390 FIGSVCSNEEQPSSDILDLVEKAYS---EMLDLGVVLNKV 426


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 189/371 (50%), Gaps = 8/371 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +AM++     G++D A+ +      E      Y ++ LI      G    A++V + M R
Sbjct: 4   NAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDEMLR 60

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
               P++VTY  +++A C + G  +K  +++ D+M   G  PD +T+N ++  +C  G +
Sbjct: 61  RRCVPDVVTYTILLEATCKRSG--YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            +A   L N +   G + +  +YN +L  +C   + + A E+M EM  K   PNVVT++ 
Sbjct: 119 DDAIEFLKN-LPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I    + G ++ AL +  ++   G   + +SYN +L  + K  + ++A+     M S G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D V+YN LL    + G+ D    +  Q+K    +P L++Y+T+ID  +K G  KEA+
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++  E    GL+ D++ YS +   LC+   +E A+    ++   GIRPN V YN+II   
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 555 GRSATTECTVD 565
            +   T   +D
Sbjct: 358 CKRRETHSAID 368



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 185/366 (50%), Gaps = 18/366 (4%)

Query: 228 VYAFSALISAY-GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
           V  ++ L+ A   RSGY ++A+ + + M+     P++VTYN V++  C +G VD    +E
Sbjct: 67  VVTYTILLEATCKRSGY-KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD--DAIE 123

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
              ++   G +P+ +++N +L        WE A  L  EM  +G   ++ T+N L+  +C
Sbjct: 124 FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLC 183

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           +   ++ A E++ ++P    +PN ++Y+ ++  + K  ++D A+     M   G   D V
Sbjct: 184 RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIV 243

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           SYNT+L+   + G  + A+ +  +++  G     ++YN ++ G  K GK  E   +  +M
Sbjct: 244 SYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 303

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
            +  + P+++TYST+     +    ++A++ F + +  G++ + VLY+A+I  LCK    
Sbjct: 304 VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 363

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
            SA+ L   M   G  PN  TY  +I+        +       RDL        LD +CS
Sbjct: 364 HSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIK-----EARDL--------LDELCS 410

Query: 586 QDDKDV 591
           +  +++
Sbjct: 411 RAGEEI 416



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 162/344 (47%), Gaps = 27/344 (7%)

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
             YN ++   C   Q+D A  ++AEMP   + P+  TY+T+I G    GR  +AL +  E
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M       D V+Y  +L    K   +++A+ +  EM   G   D VTYN ++ G  ++G+
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            D+     + + +    PN ++Y+ ++        +++A ++  E  Q G   +VV ++ 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD----DVERD 570
           LI  LC+ GLVE A+ +L+++ K G  PN ++YN ++ AF +    +  +      V R 
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 571 LGKQKESAN--LDAMCSQDDKDV------QEAGRTDNQIIKVFGQLV--AEKAGQGKKEN 620
                 S N  L A+C   + DV      Q   +    ++  +  ++    KAG+ K+  
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA- 296

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
                    L +  +M    ++P+++T+S I     R +  EDA
Sbjct: 297 ---------LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 331



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 40/235 (17%)

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           + YNA++ GY   G+ D  RR+  +M    V P+  TY+TLI      G    A+ +  E
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             +     DVV Y+ L++A CK    + A+ LLDEM  +G  P++VTYN +++   +   
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ--- 114

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI---IKVFGQLVAEKAGQG 616
            E  VDD    L                 K++   G   N +   I + G   AE+    
Sbjct: 115 -EGRVDDAIEFL-----------------KNLPSYGCEPNTVSYNIVLKGLCTAERWEDA 156

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           ++             +  +M +    PNVVTF+ +++   R    E A  +LE++
Sbjct: 157 EE-------------LMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 198


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 153/581 (26%), Positives = 270/581 (46%), Gaps = 62/581 (10%)

Query: 202 ILGRLGKVDL--AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           + G L K  L   K +    + EG   +   F++L+ AY  SG    A  +   M +   
Sbjct: 303 LCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH 362

Query: 260 KPNLVTYNAVIDA-CG-KGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
            P  V YN +I + CG K  ++F  +    + + +ML  GV  ++I  +S        G 
Sbjct: 363 MPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 422

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           +E A ++  EM+ +G   D  TY+ +L+ +C  ++M+LAF +  EM    +  +V TY+ 
Sbjct: 423 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 482

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           M+D + KAG ++ A   F+EM+ +G   + V+Y  ++  Y K  +   A  + + M S G
Sbjct: 483 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 542

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA----------------DCVSPNLLTYS 478
              + VTY+AL+ G+ K G+ ++  ++FE+M                  +   PN++TY 
Sbjct: 543 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 602

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            L+D + K    +EA ++       G + + ++Y ALID LCK G ++ A  +  EM++ 
Sbjct: 603 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 662

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE----- 593
           G    + TY+S+ID + +            +DL  +  S  L+  C+ +     E     
Sbjct: 663 GFPATLYTYSSLIDRYFKVK---------RQDLASKVLSKMLENSCAPNVVIYTEMIDGL 713

Query: 594 --AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ--------EILCILGVFQKMHKLKIKP 643
              G+TD +  K+  Q++ EK  Q                 +I   L + ++M    + P
Sbjct: 714 CKVGKTD-EAYKLM-QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 771

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNI------WVQA 697
           N VT+  +++ C +  + + A  LLEE++    Q +   H    GYR  I      ++++
Sbjct: 772 NYVTYRVLIDHCCKNGALDVAHNLLEEMK----QTHWPTHT--AGYRKVIEGFNKEFIES 825

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           L L DE+   D++   + Y  L D L    Q+    L +LE
Sbjct: 826 LGLLDEIGQDDTAPFLSVYRLLIDNLIK-AQRLEMALRLLE 865



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 223/492 (45%), Gaps = 35/492 (7%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           +DLA+  +   L  G        S+       +G  ++A SV   M      P+  TY+ 
Sbjct: 388 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 447

Query: 269 VID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           V++  C    ++   +  +F++M R G+  D  T+  ++    + GL E AR  FNEM  
Sbjct: 448 VLNYLCNASKMELAFL--LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 505

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G   ++ TY  L+ A  K  ++  A E+   M ++   PN+VTYS +IDG+ KAG+++ 
Sbjct: 506 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 565

Query: 388 ALNMFSEM-------------KFLGIGLDR---VSYNTVLSIYAKLGRFEEALLVCKEME 431
           A  +F  M             K      +R   V+Y  +L  + K  R EEA  +   M 
Sbjct: 566 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 625

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G   + + Y+AL+ G  K GK DE + +  +M        L TYS+LID Y K     
Sbjct: 626 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 685

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            A ++  +  +     +VV+Y+ +ID LCK G  + A  L+  M ++G +PNVVTY ++I
Sbjct: 686 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 745

Query: 552 DAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQIIKV 604
           D FG     E  ++ +ER +G +  + N       +D  C     DV       + +++ 
Sbjct: 746 DGFGMIGKIETCLELLER-MGSKGVAPNYVTYRVLIDHCCKNGALDVA------HNLLEE 798

Query: 605 FGQL--VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
             Q       AG  K      +E +  LG+  ++ +    P +  +  +++   +    E
Sbjct: 799 MKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLE 858

Query: 663 DASMLLEELRLF 674
            A  LLEE+  F
Sbjct: 859 MALRLLEEVATF 870



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 201/414 (48%), Gaps = 29/414 (7%)

Query: 164 RELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-----SAMISILGRLGKVDLAKNIFET 218
           R L + G++ KA     F+V RE     QG +      S +++ L    K++LA  +FE 
Sbjct: 415 RCLCSAGKYEKA-----FSVIRE--MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 467

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G    VY ++ ++ ++ ++G  ++A   FN M+     PN+VTY A+I A  K   
Sbjct: 468 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK- 526

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN-----------EMVH 327
              +  E+F+ ML  G  P+ +T+++L+    + G  E A  +F            +M  
Sbjct: 527 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYF 586

Query: 328 RGIDQD-----IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           +  D +     + TY  LLD  CK  +++ A +++  M  +   PN + Y  +IDG  K 
Sbjct: 587 KQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 646

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G+LD+A  + +EM   G      +Y++++  Y K+ R + A  V  +M  +    + V Y
Sbjct: 647 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 706

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             ++ G  K GK DE  ++ + M+     PN++TY+ +ID +   G  +  +++      
Sbjct: 707 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 766

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            G+  + V Y  LID  CKNG ++ A +LL+EM +     +   Y  +I+ F +
Sbjct: 767 KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK 820



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 185/373 (49%), Gaps = 17/373 (4%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            S+    L   GK + A ++    + +G+      +S +++    +   + A  +F  MK
Sbjct: 410 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 469

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           R  L  ++ TY  ++D+  K G+  +   + F++M   G  P+ +T+ +L+    +    
Sbjct: 470 RGGLVADVYTYTIMVDSFCKAGL-IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 528

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP-AKNIS-------- 366
             A  LF  M+  G   +I TY+ L+D  CK  Q++ A +I   M  +K++         
Sbjct: 529 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 588

Query: 367 -------PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
                  PNVVTY  ++DG+ K+ R+++A  +   M   G   +++ Y+ ++    K+G+
Sbjct: 589 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 648

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            +EA  V  EM   G      TY++L+  Y K  + D   ++  +M  +  +PN++ Y+ 
Sbjct: 649 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE 708

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +ID   K G   EA ++ +  ++ G + +VV Y+A+ID     G +E+ + LL+ M  +G
Sbjct: 709 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 768

Query: 540 IRPNVVTYNSIID 552
           + PN VTY  +ID
Sbjct: 769 VAPNYVTYRVLID 781



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 198/419 (47%), Gaps = 64/419 (15%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-- 254
           +A+I    +  KV  A  +FET L+EG    +  +SALI  + ++G  ++A  +F  M  
Sbjct: 516 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 575

Query: 255 -----------KRYN---LKPNLVTYNAVIDACGKGGVDFKHVVE----IFDDMLRNGVQ 296
                      K+Y+    +PN+VTY A++D   K      H VE    + D M   G +
Sbjct: 576 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS-----HRVEEARKLLDAMSMEGCE 630

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           P++I +++L+    + G  + A+ +  EM   G    ++TY++L+D   K  + DLA ++
Sbjct: 631 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 690

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           +++M   + +PNVV Y+ MIDG  K G+ D+A  +   M+  G   + V+Y  ++  +  
Sbjct: 691 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 750

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA--------- 467
           +G+ E  L + + M S G+  + VTY  L+    K G  D    + E+MK          
Sbjct: 751 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 810

Query: 468 ------------------------DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
                                   D  +P L  Y  LID   K    + A+++  E   A
Sbjct: 811 YRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV--A 868

Query: 504 GLKADVVLYSA----LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
              A +V YS+    LI++LC    VE+A  L  EMTK+G+ P + ++ S+I    R++
Sbjct: 869 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 927



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 118/497 (23%), Positives = 195/497 (39%), Gaps = 86/497 (17%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
            + L+  + R+G    A+     +K +  +P+  TYN +I A  K          I  +M
Sbjct: 162 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKAD-RLDSASLIHREM 220

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
               ++ D  T         + G W  A  L           D   Y  L+  +C+ +  
Sbjct: 221 SLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLF 277

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGY---AKAGRLDDALNMFSEMKFLGIGLDRVSY 407
           + A + +  M A +  PNVVTYST++ G     + GR    LNM   M   G       +
Sbjct: 278 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM---MMMEGCYPSPKIF 334

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG-------------------G 448
           N+++  Y   G    A  + K+M   G     V YN L+G                    
Sbjct: 335 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKA 394

Query: 449 YGKQ----------------------GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
           Y +                       GKY++   +  +M      P+  TYS +++    
Sbjct: 395 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 454

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
               + A  +F E K+ GL ADV  Y+ ++D+ CK GL+E A    +EM + G  PNVVT
Sbjct: 455 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 514

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIKV 604
           Y ++I A+ ++               K+   AN   + M S+        G   N  I  
Sbjct: 515 YTALIHAYLKA---------------KKVSYANELFETMLSE--------GCLPN--IVT 549

Query: 605 FGQLVAEKAGQGKKENRCRQ-EILC-------ILGVFQKMHKLKIKPNVVTFSAILNACS 656
           +  L+      G+ E  C+  E +C       +   F++      +PNVVT+ A+L+   
Sbjct: 550 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 609

Query: 657 RCNSFEDASMLLEELRL 673
           + +  E+A  LL+ + +
Sbjct: 610 KSHRVEEARKLLDAMSM 626



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + MI  L ++GK D A  + +    +G    V  ++A+I  +G  G  +  + +   M
Sbjct: 705 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 764

Query: 255 KRYNLKPNLVTYNAVIDACGK-GGVDFKH--------------------VVEIF------ 287
               + PN VTY  +ID C K G +D  H                    V+E F      
Sbjct: 765 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIE 824

Query: 288 -----DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF--TYNTL 340
                D++ ++   P    +  L+    +    E A  L  E+         +  TYN+L
Sbjct: 825 SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSL 884

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           ++++C   +++ AF++ +EM  K + P + ++ ++I G  +  ++ +AL
Sbjct: 885 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 933


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/518 (25%), Positives = 242/518 (46%), Gaps = 41/518 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +AMI  L + GKVD    +       G   TV  ++ L+ A  +SG  +EA  +   M++
Sbjct: 15  TAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQ 74

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P++VT+  +I+   +G   F  V  +  +M + GV P+ + +N L+    R G   
Sbjct: 75  GGMTPSVVTFGILINGLARGE-RFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCS 133

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF+EMV + +     TYN +  A+CK  +M+ A  I+ +M +  ++ +   ++T++
Sbjct: 134 QALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVV 193

Query: 377 DGY-AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL----------- 424
                +  RL+  +++ +EM   G+  +       +    K G+ +EA+           
Sbjct: 194 AWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGK 253

Query: 425 ------LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
                  V + M + GI  D++TYN ++ G  K  K +E  ++   M      P+L T++
Sbjct: 254 YMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFN 313

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           TL+  Y   G  +E   +  + K  GL+ D+V Y  +ID  CK   +  A   L E+   
Sbjct: 314 TLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDR 373

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESANLDA----MCS----QDD 588
           G++PNV  YN++I  +GR+      +D VE  +  G Q  +    +    MC     ++ 
Sbjct: 374 GLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEA 433

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKIKPNVVT 647
           K +    R +N  + V G  +         +  C+  +++  +  F++M    I PN +T
Sbjct: 434 KTIFSQARENNVDLGVIGYTIM-------IQGYCKLGKMVEAVAYFEEMRSRGISPNKLT 486

Query: 648 FSAILNACSRCNSFEDASMLLEEL----RLFDNQVYGV 681
           ++ ++ A S+  + E+AS L +E+     + DN  YG 
Sbjct: 487 YTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGT 524



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 178/366 (48%), Gaps = 17/366 (4%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALIS-AYGRSGYCQEAISVFNSMKRYNLKP 261
           L + G+++ A+ I E  L+ G       F+ +++    R+   +  +S+ N M    ++P
Sbjct: 161 LCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRP 220

Query: 262 NLVTYNAVIDACGKGGVD----------------FKHVVEIFDDMLRNGVQPDRITFNSL 305
           N     A +    KGG                   K   ++   ML  G++ D IT+N +
Sbjct: 221 NDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIM 280

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +  C +    E A  L  +M  RG   D+FT+NTLL A C   +M+  F ++ +M  + +
Sbjct: 281 IRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGL 340

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            P++V+Y T+IDG+ KA  +  A    +E+   G+  +   YN ++  Y + G    A+ 
Sbjct: 341 QPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAID 400

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
             + M+S+GI+   VTY +L+      G  +E + +F Q + + V   ++ Y+ +I  Y 
Sbjct: 401 AVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYC 460

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G   EA+  F E +  G+  + + Y+ L+ A  K+G  E A  L DEM   G+ P+ +
Sbjct: 461 KLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNI 520

Query: 546 TYNSII 551
           TY ++I
Sbjct: 521 TYGTLI 526



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 167/342 (48%), Gaps = 23/342 (6%)

Query: 183 VKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSG 242
           V R  R ND   L +A +  L + GK   A  I+   LN+G                   
Sbjct: 214 VTRGMRPND--PLMTACMRELCKGGKHQEAVGIWFKTLNKG------------------K 253

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
           Y +EA  V  +M    ++ + +TYN +I  C K     +  +++  DM R G +PD  TF
Sbjct: 254 YMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDS-KMEEAIKLHGDMTRRGFKPDLFTF 312

Query: 303 NSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           N+LL A C+ G + E   +L ++M   G+  DI +Y T++D  CK   +  A E + E+ 
Sbjct: 313 NTLLHAYCNLGKM-EETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELM 371

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            + + PNV  Y+ +I GY + G +  A++    MK  GI    V+Y +++      G  E
Sbjct: 372 DRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVE 431

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           EA  +  +   + +    + Y  ++ GY K GK  E    FE+M++  +SPN LTY+TL+
Sbjct: 432 EAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLM 491

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
             YSK G  +EA ++F E   +G+  D + Y  LI    + G
Sbjct: 492 YAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKG 533



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/453 (22%), Positives = 199/453 (43%), Gaps = 48/453 (10%)

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           R +  + ++Y  ++ A+CK  ++D  FE++AE+    + P VVTY+ ++D   K+GR+++
Sbjct: 5   RNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEE 64

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +   M+  G+    V++  +++  A+  RF E  +V +EME  G+  + V YN L+G
Sbjct: 65  AFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIG 124

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
            + ++G   +  R+F++M    + P  +TY+ +     K G  + A +I  +    G+  
Sbjct: 125 WHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTV 184

Query: 508 DVVLYSALIDALC-KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
              L++ ++  L  +   +ES VS+ +EM   G+RPN     + +    +    +  V  
Sbjct: 185 HCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGI 244

Query: 567 VERDLGKQK--------------ESANLDAM--------CSQDDKDVQEAGRTDNQIIK- 603
             + L K K              +   LD++        C +D K ++EA +    + + 
Sbjct: 245 WFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSK-MEEAIKLHGDMTRR 303

Query: 604 -------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
                   F  L+      GK E            +  +M    ++P++V++  I++   
Sbjct: 304 GFKPDLFTFNTLLHAYCNLGKMEE--------TFHLLDQMKTEGLQPDIVSYGTIIDGHC 355

Query: 657 RCNSFEDASMLLEEL--RLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSS---T 711
           +      A   L EL  R     V+ + + L+ GY  N  +      D V+ M S+    
Sbjct: 356 KAKDIRKAKEYLTELMDRGLKPNVF-IYNALIGGYGRNGDISG--AIDAVETMKSNGIQP 412

Query: 712 ASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQV 744
            +  Y +L   + H G    A+ +  + +   V
Sbjct: 413 TNVTYGSLMYWMCHAGLVEEAKTIFSQARENNV 445



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 108/469 (23%), Positives = 203/469 (43%), Gaps = 91/469 (19%)

Query: 295 VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAF 354
           V  +  ++ +++    + G  +A   +  E+   G+   + TYN L+DA+CK  +++ AF
Sbjct: 7   VALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAF 66

Query: 355 EIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY 414
            +   M    ++P+VVT+  +I+G A+  R  +   +  EM+ LG+  + V YN ++  +
Sbjct: 67  RLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWH 126

Query: 415 AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ-----MKADC 469
            + G   +AL +  EM    ++  AVTYN +     K+G+ +   R+ E      M   C
Sbjct: 127 CRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHC 186

Query: 470 -------------------------------VSPNLLTYSTLIDVYSKGGLYKEAMQIF- 497
                                          + PN    +  +    KGG ++EA+ I+ 
Sbjct: 187 GLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWF 246

Query: 498 ------REFKQA----------GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
                 +  K+A          G++ D + Y+ +I   CK+  +E A+ L  +MT+ G +
Sbjct: 247 KTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFK 306

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
           P++ T+N+++ A+       C       +LGK +E+ +L       D+   E  + D   
Sbjct: 307 PDLFTFNTLLHAY-------C-------NLGKMEETFHL------LDQMKTEGLQPD--- 343

Query: 602 IKVFGQLVAEKAGQGK-KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
           I  +G ++    G  K K+ R  +E L       ++    +KPNV  ++A++    R   
Sbjct: 344 IVSYGTII---DGHCKAKDIRKAKEYL------TELMDRGLKPNVFIYNALIGGYGRNGD 394

Query: 661 FEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDS 709
              A   +E ++    Q   V +G LM      W+    L +E K + S
Sbjct: 395 ISGAIDAVETMKSNGIQPTNVTYGSLM-----YWMCHAGLVEEAKTIFS 438



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 102/190 (53%)

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
           ++N++ N  +Y+ MI    KAG++D    M +E+   G+    V+YN ++    K GR E
Sbjct: 4   SRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVE 63

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           EA  +   ME  G+    VT+  L+ G  +  ++ EV  + ++M+   VSPN + Y+ LI
Sbjct: 64  EAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI 123

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
             + + G   +A+++F E     +K   V Y+ +  ALCK G +E A  +L++M   G+ 
Sbjct: 124 GWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMT 183

Query: 542 PNVVTYNSII 551
            +   +N+++
Sbjct: 184 VHCGLFNTVV 193



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 59/121 (48%)

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           ES  +  +  +Y A++    K GK D    M  ++    + P ++TY+ L+D   K G  
Sbjct: 3   ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 62

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           +EA ++    +Q G+   VV +  LI+ L +         +L EM + G+ PN V YN +
Sbjct: 63  EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNEL 122

Query: 551 I 551
           I
Sbjct: 123 I 123


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 196/415 (47%), Gaps = 8/415 (1%)

Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           D+L +     C  D   YT LL+ L     W    + FA  +++    N+       +I 
Sbjct: 233 DLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVT--FDMLIR 290

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
              R G V+ A  + +              + +I++  + G   +A    N+M  Y   P
Sbjct: 291 FFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNP 350

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           + ++Y  V+    +    +    E+  +M+RN   P+ +TFN+ + +  + GL E A  L
Sbjct: 351 DTISYTTVLKGLCRAE-RWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIML 409

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             +M   G    + TYN L++  C    +D A E+   MP K   PN +TY+T++ G   
Sbjct: 410 IEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCN 466

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           A RLD A  + +EM       + V++N +++ + + G  +EA+ + ++M   G   + +T
Sbjct: 467 AERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLIT 526

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN L  G  K    ++   +   + +  VSP+++T+S++I + SK    +EA+Q+F   +
Sbjct: 527 YNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQ 586

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             G++   ++Y+ ++  LCK   +++A+  L  M   G  PN  TY  +I+   R
Sbjct: 587 DIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAR 641



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 146/612 (23%), Positives = 272/612 (44%), Gaps = 71/612 (11%)

Query: 74  PNPKPFHSLSPLPSSKSE---LAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALH 130
           PNPKP H L+   +++ E   +AP+ +  R  R ++             R  +     L 
Sbjct: 17  PNPKP-HHLAAAAATRPESPNVAPNPASARLRRLIA-------------REDLAGAARLV 62

Query: 131 HVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKN 190
            ++A +RD        +  +  LC     T L+R L  RG  S A +    A   E   +
Sbjct: 63  ELSA-SRDG-------EAPDVYLC-----TKLIRNLCRRGRTSDAARVLRAA---EGSGS 106

Query: 191 DQGKLA-SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS 249
                A + +++   R G +D A+ +  +          Y ++ LI      G   +A+S
Sbjct: 107 PVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALS 163

Query: 250 VFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
           + + M R   +PN+VTY  +++A C   G  F+  + + D+M   G  P+ +T+N ++  
Sbjct: 164 LLDDMLRRGCQPNVVTYTVLLEAMCKNSG--FEQAMAVLDEMRAKGCTPNIVTYNVIING 221

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
             R G  + AR+L N +   G   D  +Y TLL  +C   + D   E+ AEM  KN  PN
Sbjct: 222 MCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPN 281

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
            VT+  +I  + + G ++ A+ +  +M       +    N V++   K GR ++A     
Sbjct: 282 EVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLN 341

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            M S G   D ++Y  +L G  +  ++++ + + ++M  +   PN +T++T I +  + G
Sbjct: 342 NMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKG 401

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
           L ++A+ +  + ++ G    VV Y+AL++  C  G ++SA+ L   M     +PN +TY 
Sbjct: 402 LIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYT 458

Query: 549 SIIDAFGRS----ATTECTVDDVERDLGKQKESAN--LDAMCSQDDKD--------VQEA 594
           +++     +    A  E   + + RD      + N  ++  C +   D        + E 
Sbjct: 459 TLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEH 518

Query: 595 GRTDNQII--KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
           G T N I    +F  +  + + +   E            +   +    + P+V+TFS+I+
Sbjct: 519 GCTPNLITYNTLFDGITKDCSSEDALE------------LLHGLVSKGVSPDVITFSSII 566

Query: 653 NACSRCNSFEDA 664
              S+ +  E+A
Sbjct: 567 GILSKEDRVEEA 578



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 141/276 (51%), Gaps = 6/276 (2%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           F+  I    + G  ++AI +   M+ +     +VTYNA+++  C +G +D    +E+F  
Sbjct: 390 FNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHID--SALELFRS 447

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M     +P+ IT+ +LL         +AA  L  EM+HR    ++ T+N L++  C+   
Sbjct: 448 M---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGF 504

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A E++ +M     +PN++TY+T+ DG  K    +DAL +   +   G+  D +++++
Sbjct: 505 LDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSS 564

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++ I +K  R EEA+ +    +  G+R  A+ YN +L G  K+ + D        M ++ 
Sbjct: 565 IIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNG 624

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
             PN  TY  LI+  ++ GL KEA  +       G+
Sbjct: 625 CMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGV 660



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 153/326 (46%), Gaps = 11/326 (3%)

Query: 154 CGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDL 211
           C  D   YT +L+ L     W+ A +     V+     N+     +  I IL + G ++ 
Sbjct: 348 CNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVT--FNTFICILCQKGLIEQ 405

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + E     G    V  ++AL++ +   G+   A+ +F SM     KPN +TY  ++ 
Sbjct: 406 AIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLT 462

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
             C    +D     E+  +ML     P+ +TFN L+    + G  + A  L  +M+  G 
Sbjct: 463 GLCNAERLD--AAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGC 520

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             ++ TYNTL D I K    + A E++  + +K +SP+V+T+S++I   +K  R+++A+ 
Sbjct: 521 TPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQ 580

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           MF   + +G+    + YN +L    K    + A+     M S+G   +  TY  L+ G  
Sbjct: 581 MFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLA 640

Query: 451 KQGKYDEVRRMFEQMKA-DCVSPNLL 475
           ++G   E + +   + +   VS NL+
Sbjct: 641 REGLLKEAQDLLSMLCSRGVVSKNLI 666


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 196/369 (53%), Gaps = 6/369 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L   G+V  A  +    + +G    V  +  +++   + G  + A+++ + M+ 
Sbjct: 14  NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 73

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            ++KP++V Y+A+ID   K G        +F +ML  G+ P+  T+N ++      G W 
Sbjct: 74  THIKPDVVIYSAIIDRLCKDG-HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 132

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A+ L  +M+ R I+ D+ T+N L+ A  K  ++  A ++  EM  + I P+ VTY++MI
Sbjct: 133 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 192

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+ K  R DDA +MF  M       D V++NT++ +Y +  R +E + + +E+   G+ 
Sbjct: 193 YGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 248

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +  TYN L+ G+ +    +  + +F++M +  V P+ +T + L+  + +    +EA+++
Sbjct: 249 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 308

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF-G 555
           F   + + +  D V Y+ +I  +CK   V+ A  L   +   G+ P+V TYN +I  F G
Sbjct: 309 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 368

Query: 556 RSATTECTV 564
           +SA ++  V
Sbjct: 369 KSAISDANV 377



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 164/309 (53%), Gaps = 7/309 (2%)

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M    L P ++T+N +I+  C +G V       + + M+  G+  D +T+ +++    + 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRV--LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 58

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  ++A NL ++M    I  D+  Y+ ++D +CK      A  + +EM  K I+PNV TY
Sbjct: 59  GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 118

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + MIDG+   GR  DA  +  +M    I  D +++N ++S   K G+  EA  +C EM  
Sbjct: 119 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 178

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             I  D VTYN+++ G+ K  ++D+ + MF+ M     SP+++T++T+IDVY +     E
Sbjct: 179 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDE 234

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            MQ+ RE  + GL A+   Y+ LI   C+   + +A  L  EM   G+ P+ +T N ++ 
Sbjct: 235 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 294

Query: 553 AFGRSATTE 561
            F  +   E
Sbjct: 295 GFCENEKLE 303



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 178/358 (49%), Gaps = 13/358 (3%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            +++ + ++G    A N+            V  +SA+I    + G+  +A  +F+ M   
Sbjct: 50  TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 109

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            + PN+ TYN +ID  C  G   +     +  DM+   + PD +TFN+L++   + G   
Sbjct: 110 GIAPNVFTYNCMIDGFCSFG--RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 167

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA---FEIMAEMPAKNISPNVVTYS 373
            A  L +EM+HR I  D  TYN+++   CK  + D A   F++MA       SP+VVT++
Sbjct: 168 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA-------SPDVVTFN 220

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+ID Y +A R+D+ + +  E+   G+  +  +YNT++  + ++     A  + +EM S 
Sbjct: 221 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 280

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G+  D +T N LL G+ +  K +E   +FE ++   +  + + Y+ +I    KG    EA
Sbjct: 281 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 340

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             +F      G++ DV  Y+ +I   C    +  A  L  +M   G  P+  TYN++I
Sbjct: 341 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 398



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 181/358 (50%), Gaps = 5/358 (1%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + SA+I  L + G    A+ +F   L +G    V+ ++ +I  +   G   +A  +   M
Sbjct: 82  IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 141

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
               + P+++T+NA+I A  K G  F+   ++ D+ML   + PD +T+NS++    +   
Sbjct: 142 IEREINPDVLTFNALISASVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 200

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           ++ A+++F+ M       D+ T+NT++D  C+  ++D   +++ E+  + +  N  TY+T
Sbjct: 201 FDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 256

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I G+ +   L+ A ++F EM   G+  D ++ N +L  + +  + EEAL + + ++ S 
Sbjct: 257 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 316

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I  D V YN ++ G  K  K DE   +F  +    V P++ TY+ +I  +       +A 
Sbjct: 317 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 376

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            +F + K  G + D   Y+ LI    K G ++ ++ L+ EM   G   +  T   + D
Sbjct: 377 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 434



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 157/336 (46%), Gaps = 5/336 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI      G+   A+ +    +       V  F+ALISA  + G   EA  + + M  
Sbjct: 119 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 178

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P+ VTYN++I    K    F     +FD M      PD +TFN+++ V  R    +
Sbjct: 179 RCIFPDTVTYNSMIYGFCKHN-RFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVD 233

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
               L  E+  RG+  +  TYNTL+   C+   ++ A ++  EM +  + P+ +T + ++
Sbjct: 234 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 293

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+ +  +L++AL +F  ++   I LD V+YN ++    K  + +EA  +   +   G+ 
Sbjct: 294 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 353

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  TYN ++ G+  +    +   +F +MK +   P+  TY+TLI    K G   +++++
Sbjct: 354 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 413

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
             E +  G   D      + D +    L +S   +L
Sbjct: 414 ISEMRSNGFSGDAFTIKMVADLITDGRLDKSFSDML 449


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 153/581 (26%), Positives = 267/581 (45%), Gaps = 62/581 (10%)

Query: 202 ILGRLGKVDL--AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           + G L K  L   K +    + EG   +   F++L+ AY  SG    A  +   M +   
Sbjct: 344 LCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH 403

Query: 260 KPNLVTYNAVIDA-CGKG---GVDFKHVVE-IFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
            P  V YN +I + CG       D   + E  + +ML  GV  ++I  +S        G 
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           +E A ++  EM+ +G   D  TY+ +L+ +C  ++M+LAF +  EM    +  +V TY+ 
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           M+D + KAG ++ A   F+EM+ +G   + V+Y  ++  Y K  +   A  + + M S G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA----------------DCVSPNLLTYS 478
              + VTY+AL+ G+ K G+ ++  ++FE+M                  +   PN++TY 
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            L+D + K    +EA ++       G + + ++Y ALID LCK G ++ A  +  EM++ 
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE----- 593
           G    + TY+S+ID + +            +DL  +  S  L+  C+ +     E     
Sbjct: 704 GFPATLYTYSSLIDRYFKVK---------RQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754

Query: 594 --AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ--------EILCILGVFQKMHKLKIKP 643
              G+TD +  K+  Q++ EK  Q                 +I   L + ++M    + P
Sbjct: 755 CKVGKTD-EAYKLM-QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 812

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNI------WVQA 697
           N VT+  +++ C +  + + A  LLEE++    Q +   H    GYR  I      ++++
Sbjct: 813 NYVTYRVLIDHCCKNGALDVAHNLLEEMK----QTHWPTHT--AGYRKVIEGFNKEFIES 866

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           L L DE+   D++   + Y  L D L    Q+    L +LE
Sbjct: 867 LGLLDEIGQDDTAPFLSVYRLLIDNLIK-AQRLEMALRLLE 906



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 223/492 (45%), Gaps = 35/492 (7%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           +DLA+  +   L  G        S+       +G  ++A SV   M      P+  TY+ 
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488

Query: 269 VID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           V++  C    ++   +  +F++M R G+  D  T+  ++    + GL E AR  FNEM  
Sbjct: 489 VLNYLCNASKMELAFL--LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G   ++ TY  L+ A  K  ++  A E+   M ++   PN+VTYS +IDG+ KAG+++ 
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606

Query: 388 ALNMFSEM-------------KFLGIGLDR---VSYNTVLSIYAKLGRFEEALLVCKEME 431
           A  +F  M             K      +R   V+Y  +L  + K  R EEA  +   M 
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G   + + Y+AL+ G  K GK DE + +  +M        L TYS+LID Y K     
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            A ++  +  +     +VV+Y+ +ID LCK G  + A  L+  M ++G +PNVVTY ++I
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786

Query: 552 DAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQIIKV 604
           D FG     E  ++ +ER +G +  + N       +D  C     DV       + +++ 
Sbjct: 787 DGFGMIGKIETCLELLER-MGSKGVAPNYVTYRVLIDHCCKNGALDVA------HNLLEE 839

Query: 605 FGQL--VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
             Q       AG  K      +E +  LG+  ++ +    P +  +  +++   +    E
Sbjct: 840 MKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLE 899

Query: 663 DASMLLEELRLF 674
            A  LLEE+  F
Sbjct: 900 MALRLLEEVATF 911



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 201/414 (48%), Gaps = 29/414 (7%)

Query: 164 RELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-----SAMISILGRLGKVDLAKNIFET 218
           R L + G++ KA     F+V RE     QG +      S +++ L    K++LA  +FE 
Sbjct: 456 RCLCSAGKYEKA-----FSVIRE--MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G    VY ++ ++ ++ ++G  ++A   FN M+     PN+VTY A+I A  K   
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK- 567

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN-----------EMVH 327
              +  E+F+ ML  G  P+ +T+++L+    + G  E A  +F            +M  
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYF 627

Query: 328 RGIDQD-----IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           +  D +     + TY  LLD  CK  +++ A +++  M  +   PN + Y  +IDG  K 
Sbjct: 628 KQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 687

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G+LD+A  + +EM   G      +Y++++  Y K+ R + A  V  +M  +    + V Y
Sbjct: 688 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 747

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             ++ G  K GK DE  ++ + M+     PN++TY+ +ID +   G  +  +++      
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 807

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            G+  + V Y  LID  CKNG ++ A +LL+EM +     +   Y  +I+ F +
Sbjct: 808 KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK 861



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 185/373 (49%), Gaps = 17/373 (4%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            S+    L   GK + A ++    + +G+      +S +++    +   + A  +F  MK
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           R  L  ++ TY  ++D+  K G+  +   + F++M   G  P+ +T+ +L+    +    
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGL-IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP-AKNIS-------- 366
             A  LF  M+  G   +I TY+ L+D  CK  Q++ A +I   M  +K++         
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 629

Query: 367 -------PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
                  PNVVTY  ++DG+ K+ R+++A  +   M   G   +++ Y+ ++    K+G+
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 689

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            +EA  V  EM   G      TY++L+  Y K  + D   ++  +M  +  +PN++ Y+ 
Sbjct: 690 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE 749

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +ID   K G   EA ++ +  ++ G + +VV Y+A+ID     G +E+ + LL+ M  +G
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809

Query: 540 IRPNVVTYNSIID 552
           + PN VTY  +ID
Sbjct: 810 VAPNYVTYRVLID 822



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 198/419 (47%), Gaps = 64/419 (15%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-- 254
           +A+I    +  KV  A  +FET L+EG    +  +SALI  + ++G  ++A  +F  M  
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 616

Query: 255 -----------KRYN---LKPNLVTYNAVIDACGKGGVDFKHVVE----IFDDMLRNGVQ 296
                      K+Y+    +PN+VTY A++D   K      H VE    + D M   G +
Sbjct: 617 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS-----HRVEEARKLLDAMSMEGCE 671

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           P++I +++L+    + G  + A+ +  EM   G    ++TY++L+D   K  + DLA ++
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           +++M   + +PNVV Y+ MIDG  K G+ D+A  +   M+  G   + V+Y  ++  +  
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA--------- 467
           +G+ E  L + + M S G+  + VTY  L+    K G  D    + E+MK          
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851

Query: 468 ------------------------DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
                                   D  +P L  Y  LID   K    + A+++  E   A
Sbjct: 852 YRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV--A 909

Query: 504 GLKADVVLYSA----LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
              A +V YS+    LI++LC    VE+A  L  EMTK+G+ P + ++ S+I    R++
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 114/493 (23%), Positives = 196/493 (39%), Gaps = 78/493 (15%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
            + L+  + R+G    A+     +K +  +P+  TYN +I A  K          I  +M
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKAD-RLDSASLIHREM 261

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
               ++ D  T         + G W  A  L           D   Y  L+  +C+ +  
Sbjct: 262 SLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLF 318

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGY---AKAGRLDDALNMFSEMKFLGIGLDRVSY 407
           + A + +  M A +  PNVVTYST++ G     + GR    LNM   M   G       +
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM---MMMEGCYPSPKIF 375

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG-------------------G 448
           N+++  Y   G    A  + K+M   G     V YN L+G                    
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435

Query: 449 YGKQ----------------------GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
           Y +                       GKY++   +  +M      P+  TYS +++    
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 495

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
               + A  +F E K+ GL ADV  Y+ ++D+ CK GL+E A    +EM + G  PNVVT
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGK------QKESANLDAMCSQDDKDVQEAGRTDNQ 600
           Y ++I A+ ++       +  E  L +         SA +D  C        +AG+ + +
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC--------KAGQVE-K 606

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
             ++F ++   K            ++  +   F++      +PNVVT+ A+L+   + + 
Sbjct: 607 ACQIFERMCGSK------------DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR 654

Query: 661 FEDASMLLEELRL 673
            E+A  LL+ + +
Sbjct: 655 VEEARKLLDAMSM 667



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + MI  L ++GK D A  + +    +G    V  ++A+I  +G  G  +  + +   M
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805

Query: 255 KRYNLKPNLVTYNAVIDACGK-GGVDFKH--------------------VVEIF------ 287
               + PN VTY  +ID C K G +D  H                    V+E F      
Sbjct: 806 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIE 865

Query: 288 -----DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF--TYNTL 340
                D++ ++   P    +  L+    +    E A  L  E+         +  TYN+L
Sbjct: 866 SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSL 925

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           ++++C   +++ AF++ +EM  K + P + ++ ++I G  +  ++ +AL
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 186/366 (50%), Gaps = 3/366 (0%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I +LG+  + D A  I     + G    V   + +I     +G   +A  VF  MK  + 
Sbjct: 255 IRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQ 314

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAA 318
           KP+ VTY  ++D CG  G D + V+EI++ M+ +G   + +++ +++ A+C  G L EA 
Sbjct: 315 KPDRVTYITLLDKCGDSG-DSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEAL 373

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +F+EM  +GI  + ++YN+L+    K    D A E+   M A   SPN  T+   I+ 
Sbjct: 374 A-VFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINY 432

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y K+G+   A+  +  MK  GI  D  + N VLS  A+ GR   A  V  E++  G+  D
Sbjct: 433 YGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPD 492

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            +TY  ++    K  K DE    F  M      P++L  ++LID   KGG   EA ++F 
Sbjct: 493 TITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFH 552

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           + K+  ++     Y+ L+  L + G V+  + LL+EMT     PN++TYN+++D   ++ 
Sbjct: 553 QLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNG 612

Query: 559 TTECTV 564
              C +
Sbjct: 613 EVNCAI 618



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 177/360 (49%), Gaps = 1/360 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++   G+   VD    +       G    VY+++  I   G++    EA  +   M+ 
Sbjct: 217 SVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMED 276

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              KP++VT+  VI      G       ++F  M  +  +PDR+T+ +LL  C   G  +
Sbjct: 277 SGCKPDVVTHTVVIQVLCDAG-RLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQ 335

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +   ++N MV  G + +I +Y  ++DA+C+  ++D A  +  EM  K ISP   +Y+++I
Sbjct: 336 SVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLI 395

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G+ KA   D AL +F+ M   G   +  ++   ++ Y K G+  +A+   + M+S GI 
Sbjct: 396 SGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIV 455

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D    NA+L    + G+    +R+F ++K   VSP+ +TY+ +I   SK     EAM  
Sbjct: 456 PDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNF 515

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F +  + G   DV+  ++LID L K G    A  L  ++ +  I P   TYN+++   GR
Sbjct: 516 FSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGR 575



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 173/353 (49%), Gaps = 6/353 (1%)

Query: 209  VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
            +D+A+++F      G G   + ++ ++ A G+S   +E + V   M R   +   VTYN 
Sbjct: 789  IDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNT 848

Query: 269  VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
            +I    K     +  ++++ +++  G  P   T+  LL    + G    A NLFNEM+  
Sbjct: 849  IISGLVKSK-RLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEY 907

Query: 329  GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            G   +   YN LL+        +   +I  +M  + I+P++ +Y+ +ID    AGRL+D 
Sbjct: 908  GCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDG 967

Query: 389  LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            L+ F ++  LG+  D + YN ++    K  R EEA+ +  EM+  GI  +  TYN+L+  
Sbjct: 968  LSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILH 1027

Query: 449  YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             GK GK  E  +M+E++      PN+ TY+ LI  YS  G    A   +       +   
Sbjct: 1028 LGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYD-----CVAVG 1082

Query: 509  VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            V L +ALI  L    L+  A  L  EM + G  P+  TYN I+DA G+S   E
Sbjct: 1083 VSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIE 1135



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 198/395 (50%), Gaps = 7/395 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           YT  +R LG    + +A Q      K E+       +  + +I +L   G++  AK++F 
Sbjct: 251 YTICIRVLGQAARFDEAYQILG---KMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFW 307

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKG 276
                        +  L+   G SG  Q  + ++N+M       N+V+Y AV+DA C  G
Sbjct: 308 KMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVG 367

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
            +D    + +FD+M   G+ P++ ++NSL++   +  +++ A  LFN M   G   + +T
Sbjct: 368 RLD--EALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYT 425

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           +   ++   K  Q   A +    M +K I P+V   + ++   A++GRL  A  +F E+K
Sbjct: 426 HVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELK 485

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
            +G+  D ++Y  ++   +K  + +EA+    +M  +G   D +  N+L+    K GK +
Sbjct: 486 DMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGN 545

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E  ++F Q+K   + P   TY+TL+    + G  KE M +  E   +    +++ Y+ ++
Sbjct: 546 EAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVL 605

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           D L KNG V  A+ +L  MT++G  P++ +YN+++
Sbjct: 606 DCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVM 640



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 206/415 (49%), Gaps = 12/415 (2%)

Query: 145 ILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           IL K E   C  D   +T +++ L + G  S A   F + +K  ++K D+       I++
Sbjct: 270 ILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVF-WKMKASDQKPDR----VTYITL 324

Query: 203 LGRLGKVDLAKNIFE---TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           L + G    ++++ E     + +GY + + +++A++ A  + G   EA++VF+ MK   +
Sbjct: 325 LDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGI 384

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            P   +YN++I    K  + F   +E+F+ M   G  P+  T    +    + G    A 
Sbjct: 385 SPEQYSYNSLISGFLKADM-FDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAI 443

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
             +  M  +GI  D+   N +L ++ +  ++ +A  +  E+    +SP+ +TY+ MI   
Sbjct: 444 QRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCC 503

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
           +KA + D+A+N FS+M   G   D ++ N+++    K G+  EA  +  +++   I    
Sbjct: 504 SKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTN 563

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
            TYN LL G G++GK  EV  + E+M      PNL+TY+T++D  SK G    A+ +   
Sbjct: 564 GTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYS 623

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             + G   D+  Y+ ++  L K    E A  +  +M K+ + P+  T  +I+ +F
Sbjct: 624 MTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQM-KKILAPDYATLCTILPSF 677



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 190/397 (47%), Gaps = 7/397 (1%)

Query: 285  EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
            ++F+     GV     ++NSL+       L + A +LF EM   G   D FTYN +LDA+
Sbjct: 759  QLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAM 818

Query: 345  CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
             K  +++    + AEM  K      VTY+T+I G  K+ RL+ A++++  +   G     
Sbjct: 819  GKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTP 878

Query: 405  VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
             +Y  +L    K G+  +A  +  EM   G + +   YN LL G+   G  + V ++FE+
Sbjct: 879  CTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEK 938

Query: 465  MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
            M    ++P++ +Y+ LID     G   + +  FR+  + GL+ D+++Y+ LID L K+  
Sbjct: 939  MVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSER 998

Query: 525  VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL--GKQKESANLDA 582
            +E AV L +EM K+GI PN+ TYNS+I   G++          E  L  G +      +A
Sbjct: 999  IEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNA 1058

Query: 583  MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL-GVFQKMHKLKI 641
            +     +    +G TDN         V              + ++ I  G+F +M +   
Sbjct: 1059 LI----RGYSVSGSTDNAYAAYDCVAVGVSLKTALISGLVDENLINIAEGLFAEMKRRGC 1114

Query: 642  KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
             P+  T++ IL+A  +    E+   + EE+    NQ+
Sbjct: 1115 GPDQFTYNLILDAIGKSMRIEEMLKVQEEIAEDLNQL 1151



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 140/617 (22%), Positives = 264/617 (42%), Gaps = 39/617 (6%)

Query: 57  PSPRNAPKPA---ATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRP 113
           P+P    +P    A ST +   P            +    P  +     R  +    G  
Sbjct: 17  PAPSRTSRPGNTGAPSTGLLVAPPTRRRRGGHAGCRQSAPPAPARVHERRRAAGAGTGTE 76

Query: 114 KIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWS 173
            +    R +    EAL   TA AR   ++              +   ++L  +   G   
Sbjct: 77  SVVHMLRSAPGPAEALELFTAAARQPTAVHT-----------TESCNYMLELMRAHGRVG 125

Query: 174 KAIQCFAFAVKREERKNDQGKLASAM--ISILGRLGKVDLAKNIFETALNEGYGNTVYAF 231
              Q F   ++++  K + G  A+    + + G L    +A  +   A   G     Y +
Sbjct: 126 DMAQVFDL-MQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREA---GMSLNGYTY 181

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           + LI    +SG+  EA+ V+ +M    + P++ TY+ ++ + GK   D   V+ + ++M 
Sbjct: 182 NGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKR-DVDTVLWLLNEME 240

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
             GV+P+  ++   + V  +   ++ A  +  +M   G   D+ T+  ++  +C   ++ 
Sbjct: 241 ARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLS 300

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A ++  +M A +  P+ VTY T++D    +G     + +++ M   G   + VSY  V+
Sbjct: 301 DAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVV 360

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
               ++GR +EAL V  EM+  GI  +  +YN+L+ G+ K   +D    +F  M A   S
Sbjct: 361 DALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPS 420

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           PN  T+   I+ Y K G   +A+Q +   K  G+  DV   +A++ +L ++G +  A  +
Sbjct: 421 PNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRV 480

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCSQDDKD 590
             E+   G+ P+ +TY  +I    +++      D+         E+  + D +      D
Sbjct: 481 FYELKDMGVSPDTITYTMMIKCCSKASKA----DEAMNFFSDMVETGCVPDVLALNSLID 536

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG----VFQKMHKLKI----- 641
               G   N+  K+F QL   K  + +  N     +L  LG    V + MH L+      
Sbjct: 537 TLYKGGKGNEAWKLFHQL---KEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSI 593

Query: 642 -KPNVVTFSAILNACSR 657
             PN++T++ +L+  S+
Sbjct: 594 HPPNLITYNTVLDCLSK 610



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 196/418 (46%), Gaps = 23/418 (5%)

Query: 156  ADDYTFL---LRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLG---KV 209
            A DY  L   L      G   +A+      + + +   D+    S M  IL + G    +
Sbjct: 664  APDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSI 723

Query: 210  DLAKNIFETA--LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
            + A+NI      LN+      +    LI    +     EA  +FN  K   +     +YN
Sbjct: 724  EFAENIASRGILLND------FFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYN 777

Query: 268  AVIDACGKGGVDFKHVVEI----FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            ++I    +G VD +++++I    F +M R G  PD  T+N +L    +    E    +  
Sbjct: 778  SLI----RGLVD-ENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQA 832

Query: 324  EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
            EM  +G +    TYNT++  + K  +++ A ++   + ++  SP   TY  ++DG  KAG
Sbjct: 833  EMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAG 892

Query: 384  RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            ++ DA N+F+EM   G   +   YN +L+ +   G  E    + ++M   GI  D  +Y 
Sbjct: 893  KMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYT 952

Query: 444  ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
             L+      G+ ++    F Q+    + P+L+ Y+ LID   K    +EA+ +F E K+ 
Sbjct: 953  VLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKK 1012

Query: 504  GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            G+  ++  Y++LI  L K G    A  + +E+  +G +PNV TYN++I  +  S +T+
Sbjct: 1013 GIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTD 1070



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 135/595 (22%), Positives = 254/595 (42%), Gaps = 91/595 (15%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL-----ASAMISILGRLGKVDLAK 213
            +   +   G  G+  KAIQ       R E    +G +     A+A++S L R G++ +AK
Sbjct: 426  HVLFINYYGKSGQSLKAIQ-------RYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAK 478

Query: 214  NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
             +F    + G       ++ +I    ++    EA++ F+ M      P+++  N++ID  
Sbjct: 479  RVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTL 538

Query: 274  GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
             KGG       ++F  +    ++P   T+N+LL+   R G  +   +L  EM H     +
Sbjct: 539  YKGGKG-NEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPN 597

Query: 334  IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
            + TYNT+LD + K  +++ A  ++  M  K  +P++ +Y+T++ G  K  R ++A  MF 
Sbjct: 598  LITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFC 657

Query: 394  EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE-MESSGIRKDAVTYNALLGG---- 448
            +MK + +  D  +  T+L  + K G  +EAL   KE +  +    D  ++++L+ G    
Sbjct: 658  QMKKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNK 716

Query: 449  -------------------------------YGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
                                             K  K  E  ++F + K   VS    +Y
Sbjct: 717  AGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSY 776

Query: 478  STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
            ++LI       L   A  +F E K+ G   D   Y+ ++DA+ K+  +E  + +  EM +
Sbjct: 777  NSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHR 836

Query: 538  EGIRPNVVTYNSIIDAFGRSATTECTVD---------------------DVERDLGKQKE 576
            +G     VTYN+II    +S   E  +D                     D     GK  +
Sbjct: 837  KGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVD 896

Query: 577  SANL-DAMCSQDDKDV-----------QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
            + NL + M     K             + AG T+N + ++F ++V +      K      
Sbjct: 897  AENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTEN-VCQIFEKMVEQGINPDIKSYTVLI 955

Query: 625  EILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            + LC  G        F+++ +L ++P+++ ++ +++   +    E+A  L  E++
Sbjct: 956  DTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMK 1010



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 33/391 (8%)

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
           + ++FD M +  V+ +  TF ++ + V  +GGL  A   L   M   G+  + +TYN L+
Sbjct: 127 MAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVAL-PVMREAGMSLNGYTYNGLI 185

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             + K      A E+   M    ISP+V TYS ++  + K   +D  L + +EM+  G+ 
Sbjct: 186 YFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVK 245

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            +  SY   + +  +  RF+EA  +  +ME SG + D VT+  ++      G+  + + +
Sbjct: 246 PNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDV 305

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F +MKA    P+ +TY TL+D     G  +  M+I+      G   ++V Y+A++DALC+
Sbjct: 306 FWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQ 365

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
            G ++ A+++ DEM ++GI P   +YNS+I  F ++       D  +R L    E  N  
Sbjct: 366 VGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKA-------DMFDRAL----ELFNHM 414

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
             C          G T    I  +G     K+GQ  K           +  ++ M    I
Sbjct: 415 NACGPSPN-----GYTHVLFINYYG-----KSGQSLKA----------IQRYEHMKSKGI 454

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            P+V   +A+L++ +R      A  +  EL+
Sbjct: 455 VPDVAAANAVLSSLARSGRLGMAKRVFYELK 485



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 119/510 (23%), Positives = 220/510 (43%), Gaps = 67/510 (13%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            + ++S LGR GKV    ++ E   +  +   +  ++ ++    ++G    AI +  SM  
Sbjct: 567  NTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTE 626

Query: 257  YNLKPNLVTYNAVIDACGKG-----------------GVDFKHVVEIFDDMLRNGV---- 295
                P+L +YN V+    K                    D+  +  I    ++NG+    
Sbjct: 627  KGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEA 686

Query: 296  -------------QPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
                           D+ +F+SL+  + ++ G+ E +      +  RGI  + F    L+
Sbjct: 687  LHTVKEYILKADCNTDKSSFHSLMEGILNKAGV-EKSIEFAENIASRGILLNDFFLCPLI 745

Query: 342  DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
              +CK  +   A ++  +     +S    +Y+++I G      +D A ++F+EMK LG G
Sbjct: 746  RHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCG 805

Query: 402  LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
             D  +YN +L    K  R EE L V  EM   G     VTYN ++ G  K  + ++   +
Sbjct: 806  PDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDL 865

Query: 462  FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            +  + ++  SP   TY  L+D   K G   +A  +F E  + G K +  +Y+ L++    
Sbjct: 866  YYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRI 925

Query: 522  NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
             G  E+   + ++M ++GI P++ +Y  +ID       T CT   +   L   ++     
Sbjct: 926  AGNTENVCQIFEKMVEQGINPDIKSYTVLID-------TLCTAGRLNDGLSYFRQ----- 973

Query: 582  AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
                     + E G   + II  +  L+    G GK E    +E +C+   F +M K  I
Sbjct: 974  ---------LLELGLEPDLII--YNLLID---GLGKSERI--EEAVCL---FNEMKKKGI 1014

Query: 642  KPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             PN+ T+++++    +     +A+ + EEL
Sbjct: 1015 VPNLYTYNSLILHLGKAGKASEAAQMYEEL 1044



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 148/313 (47%), Gaps = 35/313 (11%)

Query: 222  EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG--VD 279
            +GY +T   ++ +IS   +S   ++AI ++ ++      P   TY  ++D   K G  VD
Sbjct: 837  KGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVD 896

Query: 280  FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
             ++   +F++ML  G +P+   +N LL      G  E    +F +MV +GI+ DI +Y  
Sbjct: 897  AEN---LFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTV 953

Query: 340  LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
            L+D +C   +++       ++    + P+++ Y+ +IDG  K+ R+++A+ +F+EMK  G
Sbjct: 954  LIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKG 1013

Query: 400  IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV- 458
            I  +  +YN+++    K G+  EA  + +E+   G + +  TYNAL+ GY   G  D   
Sbjct: 1014 IVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAY 1073

Query: 459  -----------------------------RRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
                                           +F +MK     P+  TY+ ++D   K   
Sbjct: 1074 AAYDCVAVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMR 1133

Query: 490  YKEAMQIFREFKQ 502
             +E +++  E  +
Sbjct: 1134 IEEMLKVQEEIAE 1146



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 163/359 (45%), Gaps = 39/359 (10%)

Query: 144  DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AM 199
            D+  + +   CG D++T+  +L  +G      + ++  A       RK  +    +   +
Sbjct: 794  DLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQA----EMHRKGYESTYVTYNTI 849

Query: 200  ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
            IS L +  +++ A +++   ++EG+  T   +  L+    ++G   +A ++FN M  Y  
Sbjct: 850  ISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGC 909

Query: 260  KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            KPN   YN +++     G + ++V +IF+ M+  G+ PD  ++  L+      G      
Sbjct: 910  KPNCTIYNILLNGHRIAG-NTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGL 968

Query: 320  NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            + F +++  G++ D+  YN L+D + K  +++ A  +  EM  K I PN+ TY+++I   
Sbjct: 969  SYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHL 1028

Query: 380  AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL-------------- 425
             KAG+  +A  M+ E+   G   +  +YN ++  Y+  G  + A                
Sbjct: 1029 GKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTA 1088

Query: 426  ----------------VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
                            +  EM+  G   D  TYN +L   GK  + +E+ ++ E++  D
Sbjct: 1089 LISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAED 1147



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 136/332 (40%), Gaps = 65/332 (19%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           S N +L +    GR  +   V   M+   ++ +  T+  +  G G QG           M
Sbjct: 110 SCNYMLELMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVM 169

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           +   +S N  TY+ LI    K G   EAM++++   + G+   V  YS L+ +  K   V
Sbjct: 170 REAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDV 229

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           ++ + LL+EM   G++PNV +Y   I   G++A      D+  + LGK ++S      C 
Sbjct: 230 DTVLWLLNEMEARGVKPNVYSYTICIRVLGQAA----RFDEAYQILGKMEDSG-----CK 280

Query: 586 QDDKDVQEAGRTDNQIIKVF---GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
            D         T   +I+V    G+L   K                   VF KM     K
Sbjct: 281 PDVV-------THTVVIQVLCDAGRLSDAK------------------DVFWKMKASDQK 315

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWV------- 695
           P+ VT+  +L+   +C    D+  ++E   +++  V         GY DNI         
Sbjct: 316 PDRVTYITLLD---KCGDSGDSQSVME---IWNAMVAD-------GYNDNIVSYTAVVDA 362

Query: 696 --------QALSLFDEVKLMDSSTASAFYNAL 719
                   +AL++FDE+K    S     YN+L
Sbjct: 363 LCQVGRLDEALAVFDEMKEKGISPEQYSYNSL 394


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 133/532 (25%), Positives = 241/532 (45%), Gaps = 75/532 (14%)

Query: 180 AFAVKREERKNDQG-----KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSAL 234
           A  + RE R  D+G      + + +I +  + GK+  A  +    L+ G    V   + L
Sbjct: 278 ALGLLREMR--DKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTL 335

Query: 235 ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG 294
           +  Y + G    A+ +F+ M    + PN VTY  +I+ C K G +     EI++ M    
Sbjct: 336 MKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNG-NMDKAYEIYNQMKNKD 394

Query: 295 VQP----------------------------------DRITFNSLLA-VCSRGGLWEAAR 319
           + P                                  +  T+NSLL+ +C  G + EA  
Sbjct: 395 ISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEAC- 453

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           +++ +MV +G+   + +YN ++   C+   MD A  +  EM  K + PN++TYS ++DGY
Sbjct: 454 SIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGY 513

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K G  + A  ++  M+   I     + N +++   K GR  E+    K++   G     
Sbjct: 514 FKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTC 573

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           +TYN ++ G+ K+G  +    ++ +M    VSPN+ TY+ LI+ + K      A+++  E
Sbjct: 574 MTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDE 633

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
            K  G++ DV +Y ALID  C+ G + +A  LL E+ + G+ PN V Y+S+I  F     
Sbjct: 634 MKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGF----- 688

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
                          ++  N++A      + + E    D QI   +  L++    +GK  
Sbjct: 689 ---------------RKLQNMEAALHLHKRMINEGIPCDLQI---YTTLISGLLKEGK-- 728

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                 +L    ++ +M    I P+++T+S +++        E+A  +LE++
Sbjct: 729 ------LLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDM 774



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 198/397 (49%), Gaps = 7/397 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILG--RLGKVDLAKNIF 216
           Y  LL  L   G+ S+A   +   V    RK  +  + S    ILG  + G +D A  +F
Sbjct: 436 YNSLLSWLCKEGKMSEACSIWEKMV----RKGVRPSVVSYNNMILGHCQQGDMDSANGVF 491

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
              L +G    +  +S L+  Y + G  + A  +++ M+  N+ P+  T N +I+   K 
Sbjct: 492 VEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKA 551

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G       +    +++ G  P  +T+N ++    + G   +A  ++ EM   G+  ++FT
Sbjct: 552 G-RTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFT 610

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y  L++  CK   MDLA ++M EM  K I  +V  Y  +IDG+ + G + +A  + SE++
Sbjct: 611 YTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQ 670

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
            +G+  ++V Y++++S + KL   E AL + K M + GI  D   Y  L+ G  K+GK  
Sbjct: 671 EVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLL 730

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
               ++ +M A  + P+L+TYS LI      G  + A +I  +  +  +   V +Y+ LI
Sbjct: 731 FASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLI 790

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
               K G ++ A  L +EM  +G+ P+  TY+ +++ 
Sbjct: 791 TGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNG 827



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 125/571 (21%), Positives = 230/571 (40%), Gaps = 123/571 (21%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            F+ L+++Y ++    +A+  FNS+   ++ P L   N  +    K  +  +   ++++ 
Sbjct: 156 VFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNM-IREARDVYNK 214

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   GV+ D  T + ++    R G  E A   F E  ++G++ D   Y+ +++A+CK   
Sbjct: 215 MASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCK--- 271

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
                            P+ V                 AL +  EM+  G     V +  
Sbjct: 272 ----------------KPDSVA----------------ALGLLREMRDKGWVPHEVIFTR 299

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           V+ +  K G+  EA+ V  EM S G   + V    L+ GY KQG  D    +F++M  + 
Sbjct: 300 VIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENG 359

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK----------------------- 506
           + PN +TY+ +I+   K G   +A +I+ + K   +                        
Sbjct: 360 ICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEAS 419

Query: 507 -----------ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII---- 551
                      A+V  Y++L+  LCK G +  A S+ ++M ++G+RP+VV+YN++I    
Sbjct: 420 KLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHC 479

Query: 552 -------------------------------DAFGRSATTECTVDDVERDLGKQKESANL 580
                                          D + +   TE      +R  G+    A  
Sbjct: 480 QQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGEN--IAPS 537

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC-------RQEILCILGVF 633
           D  C+     + +AGRT     ++  +LV E          C          +   L V+
Sbjct: 538 DFTCNIIINGLCKAGRTSESQDRL-KKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVY 596

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGY 689
            +M K+ + PNV T++ ++N   + N+ + A  +++E++      D  VY     L+ G+
Sbjct: 597 TEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYC---ALIDGF 653

Query: 690 -RDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
            R    V A  L  E++ +  S     Y+++
Sbjct: 654 CRKGDMVNASQLLSELQEVGLSPNKVVYSSM 684


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 153/581 (26%), Positives = 267/581 (45%), Gaps = 62/581 (10%)

Query: 202 ILGRLGKVDL--AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           + G L K  L   K +    + EG   +   F++L+ AY  SG    A  +   M +   
Sbjct: 344 LCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH 403

Query: 260 KPNLVTYNAVIDA-CGKG---GVDFKHVVE-IFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
            P  V YN +I + CG       D   + E  + +ML  GV  ++I  +S        G 
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           +E A ++  EM+ +G   D  TY+ +L+ +C  ++M+LAF +  EM    +  +V TY+ 
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           M+D + KAG ++ A   F+EM+ +G   + V+Y  ++  Y K  +   A  + + M S G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA----------------DCVSPNLLTYS 478
              + VTY+AL+ G+ K G+ ++  ++FE+M                  +   PN++TY 
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            L+D + K    +EA ++       G + + ++Y ALID LCK G ++ A  +  EM++ 
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE----- 593
           G    + TY+S+ID + +            +DL  +  S  L+  C+ +     E     
Sbjct: 704 GFPATLYTYSSLIDRYFKVK---------RQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754

Query: 594 --AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ--------EILCILGVFQKMHKLKIKP 643
              G+TD +  K+  Q++ EK  Q                 +I   L + ++M    + P
Sbjct: 755 CKVGKTD-EAYKLM-QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 812

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNI------WVQA 697
           N VT+  +++ C +  + + A  LLEE++    Q +   H    GYR  I      ++++
Sbjct: 813 NYVTYRVLIDHCCKNGALDVAHNLLEEMK----QTHWPTHT--AGYRKVIEGFNKEFIES 866

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           L L DE+   D++   + Y  L D L    Q+    L +LE
Sbjct: 867 LGLLDEIGQDDTAPFLSVYRLLIDNLIK-AQRLEMALRLLE 906



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 223/492 (45%), Gaps = 35/492 (7%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           +DLA+  +   L  G        S+       +G  ++A SV   M      P+  TY+ 
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488

Query: 269 VID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           V++  C    ++   +  +F++M R G+  D  T+  ++    + GL E AR  FNEM  
Sbjct: 489 VLNYLCNASKMELAFL--LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G   ++ TY  L+ A  K  ++  A E+   M ++   PN+VTYS +IDG+ KAG+++ 
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606

Query: 388 ALNMFSEM-------------KFLGIGLDR---VSYNTVLSIYAKLGRFEEALLVCKEME 431
           A  +F  M             K      +R   V+Y  +L  + K  R EEA  +   M 
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G   + + Y+AL+ G  K GK DE + +  +M        L TYS+LID Y K     
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            A ++  +  +     +VV+Y+ +ID LCK G  + A  L+  M ++G +PNVVTY ++I
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786

Query: 552 DAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQIIKV 604
           D FG     E  ++ +ER +G +  + N       +D  C     DV       + +++ 
Sbjct: 787 DGFGMIGKIETCLELLER-MGSKGVAPNYVTYRVLIDHCCKNGALDVA------HNLLEE 839

Query: 605 FGQL--VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
             Q       AG  K      +E +  LG+  ++ +    P +  +  +++   +    E
Sbjct: 840 MKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLE 899

Query: 663 DASMLLEELRLF 674
            A  LLEE+  F
Sbjct: 900 MALRLLEEVATF 911



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 201/414 (48%), Gaps = 29/414 (7%)

Query: 164 RELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-----SAMISILGRLGKVDLAKNIFET 218
           R L + G++ KA     F+V RE     QG +      S +++ L    K++LA  +FE 
Sbjct: 456 RCLCSAGKYEKA-----FSVIRE--MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G    VY ++ ++ ++ ++G  ++A   FN M+     PN+VTY A+I A  K   
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK- 567

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN-----------EMVH 327
              +  E+F+ ML  G  P+ +T+++L+    + G  E A  +F            +M  
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYF 627

Query: 328 RGIDQD-----IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           +  D +     + TY  LLD  CK  +++ A +++  M  +   PN + Y  +IDG  K 
Sbjct: 628 KQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 687

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G+LD+A  + +EM   G      +Y++++  Y K+ R + A  V  +M  +    + V Y
Sbjct: 688 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 747

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             ++ G  K GK DE  ++ + M+     PN++TY+ +ID +   G  +  +++      
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 807

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            G+  + V Y  LID  CKNG ++ A +LL+EM +     +   Y  +I+ F +
Sbjct: 808 KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK 861



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 185/373 (49%), Gaps = 17/373 (4%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            S+    L   GK + A ++    + +G+      +S +++    +   + A  +F  MK
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           R  L  ++ TY  ++D+  K G+  +   + F++M   G  P+ +T+ +L+    +    
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGL-IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP-AKNIS-------- 366
             A  LF  M+  G   +I TY+ L+D  CK  Q++ A +I   M  +K++         
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 629

Query: 367 -------PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
                  PNVVTY  ++DG+ K+ R+++A  +   M   G   +++ Y+ ++    K+G+
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 689

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            +EA  V  EM   G      TY++L+  Y K  + D   ++  +M  +  +PN++ Y+ 
Sbjct: 690 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE 749

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +ID   K G   EA ++ +  ++ G + +VV Y+A+ID     G +E+ + LL+ M  +G
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809

Query: 540 IRPNVVTYNSIID 552
           + PN VTY  +ID
Sbjct: 810 VAPNYVTYRVLID 822



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 198/419 (47%), Gaps = 64/419 (15%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-- 254
           +A+I    +  KV  A  +FET L+EG    +  +SALI  + ++G  ++A  +F  M  
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 616

Query: 255 -----------KRYN---LKPNLVTYNAVIDACGKGGVDFKHVVE----IFDDMLRNGVQ 296
                      K+Y+    +PN+VTY A++D   K      H VE    + D M   G +
Sbjct: 617 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS-----HRVEEARKLLDAMSMEGCE 671

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           P++I +++L+    + G  + A+ +  EM   G    ++TY++L+D   K  + DLA ++
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           +++M   + +PNVV Y+ MIDG  K G+ D+A  +   M+  G   + V+Y  ++  +  
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA--------- 467
           +G+ E  L + + M S G+  + VTY  L+    K G  D    + E+MK          
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851

Query: 468 ------------------------DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
                                   D  +P L  Y  LID   K    + A+++  E   A
Sbjct: 852 YRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV--A 909

Query: 504 GLKADVVLYSA----LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
              A +V YS+    LI++LC    VE+A  L  EMTK+G+ P + ++ S+I    R++
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 114/493 (23%), Positives = 196/493 (39%), Gaps = 78/493 (15%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
            + L+  + R+G    A+     +K +  +P+  TYN +I A  K          I  +M
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKAD-RLDSASLIHREM 261

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
               ++ D  T         + G W  A  L           D   Y  L+  +C+ +  
Sbjct: 262 SLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLF 318

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGY---AKAGRLDDALNMFSEMKFLGIGLDRVSY 407
           + A + +  M A +  PNVVTYST++ G     + GR    LNM   M   G       +
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM---MMMEGCYPSPKIF 375

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG-------------------G 448
           N+++  Y   G    A  + K+M   G     V YN L+G                    
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435

Query: 449 YGKQ----------------------GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
           Y +                       GKY++   +  +M      P+  TYS +++    
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 495

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
               + A  +F E K+ GL ADV  Y+ ++D+ CK GL+E A    +EM + G  PNVVT
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGK------QKESANLDAMCSQDDKDVQEAGRTDNQ 600
           Y ++I A+ ++       +  E  L +         SA +D  C        +AG+ + +
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC--------KAGQVE-K 606

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
             ++F ++   K            ++  +   F++      +PNVVT+ A+L+   + + 
Sbjct: 607 ACQIFERMCGSK------------DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR 654

Query: 661 FEDASMLLEELRL 673
            E+A  LL+ + +
Sbjct: 655 VEEARKLLDAMSM 667



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + MI  L ++GK D A  + +    +G    V  ++A+I  +G  G  +  + +   M
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805

Query: 255 KRYNLKPNLVTYNAVIDACGK-GGVDFKH--------------------VVEIF------ 287
               + PN VTY  +ID C K G +D  H                    V+E F      
Sbjct: 806 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIE 865

Query: 288 -----DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF--TYNTL 340
                D++ ++   P    +  L+    +    E A  L  E+         +  TYN+L
Sbjct: 866 SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSL 925

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           ++++C   +++ AF++ +EM  K + P + ++ ++I G  +  ++ +AL
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 131/502 (26%), Positives = 242/502 (48%), Gaps = 38/502 (7%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           +++ L+++  R G  +EA  +   M+     P++V+Y  +ID  C  G  + + VV++  
Sbjct: 112 SYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVG--ELQKVVQLVK 169

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +M   G++P+  T++S++ +  + G       +  EM+ RG+  D   Y TL+D  CK  
Sbjct: 170 EMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLG 229

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
               A+++ +EM A+ I P+ + +S +I G + +G++ +A  +F+EM   G   D V+Y 
Sbjct: 230 NTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYT 289

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            ++  Y KLG  ++A  +  +M   G+  + VTY AL  G  K G+ D    +  +M   
Sbjct: 290 ALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRK 349

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            +  N+ TY+T+++   K G   +A+++  E K+AGL  D + Y+ L+DA  K G +  A
Sbjct: 350 GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKA 409

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
             LL EM   G++P VVT+N +++    S   E    D ER L    E            
Sbjct: 410 RELLREMLDRGLQPTVVTFNVLMNGLCMSGKLE----DGERLLKWMLE------------ 453

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
           K +     T N I+K +           +   R   EI      ++ M    + P+  T+
Sbjct: 454 KGIMPNAATYNSIMKQYCI---------RNNMRISTEI------YRGMCAQGVVPDSNTY 498

Query: 649 SAILNACSRCNSFEDASMLLEEL--RLFDNQVYGVAHGLLMG-YRDNIWVQALSLFDEVK 705
           + ++    +  + ++A  L +E+  + F N      + L+ G ++    ++A  LF+E++
Sbjct: 499 NILIKGHCKARNMKEAWFLHKEMVEKRF-NLTASSYNALIKGFFKRKKLLEARQLFEEMR 557

Query: 706 LMDSSTASAFYNALTDMLWHFG 727
                 ++  YN   DM +  G
Sbjct: 558 REGLVASAEIYNLFVDMNYEEG 579



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 189/359 (52%), Gaps = 7/359 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +++ L RLGK+  A ++      +G    V +++ +I  Y   G  Q+ + +   M+   
Sbjct: 116 LMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKG 175

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           LKPNL TY+++I    K G     VVE   +  +M++ GV PD + + +L+    + G  
Sbjct: 176 LKPNLYTYSSIILLLCKSG----KVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNT 231

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +AA  LF+EM  R I  D   ++ L+  +    ++  A ++  EM  K   P+ VTY+ +
Sbjct: 232 QAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTAL 291

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDGY K G +  A  + ++M  +G+  + V+Y  +     K G  + A  +  EM   G+
Sbjct: 292 IDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGL 351

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + +  TYN ++ G  K G   +  ++ E+MK   + P+ +TY+TL+D Y K G   +A +
Sbjct: 352 QLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARE 411

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + RE    GL+  VV ++ L++ LC +G +E    LL  M ++GI PN  TYNSI+  +
Sbjct: 412 LLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQY 470



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 206/446 (46%), Gaps = 31/446 (6%)

Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV 283
           +G+  + F         +G   EA   F+ +  Y +  +  + N  +            V
Sbjct: 35  WGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMV 94

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           +++F +  + GV  +  ++N L+    R G    A +L   M  +G   D+ +Y T++D 
Sbjct: 95  LKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDG 154

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C   ++    +++ EM  K + PN+ TYS++I    K+G++ +   +  EM   G+  D
Sbjct: 155 YCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPD 214

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            V Y T++  + KLG  + A  +  EME+  I  D++ ++AL+ G    GK  E  ++F 
Sbjct: 215 HVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFN 274

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M      P+ +TY+ LID Y K G  K+A  +  +  Q GL  +VV Y+AL D LCK+G
Sbjct: 275 EMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSG 334

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
            +++A  LL EM ++G++ N+ TYN+I++   ++      V  +E               
Sbjct: 335 ELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLME--------------- 379

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
                 +++EAG   + I          K G+  K     +E+L             ++P
Sbjct: 380 ------EMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREML----------DRGLQP 423

Query: 644 NVVTFSAILNACSRCNSFEDASMLLE 669
            VVTF+ ++N        ED   LL+
Sbjct: 424 TVVTFNVLMNGLCMSGKLEDGERLLK 449



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 213/460 (46%), Gaps = 44/460 (9%)

Query: 145 ILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMI 200
           +L + EFK C  D   YT ++    + GE  K +Q     VK  + K  +  L   S++I
Sbjct: 132 LLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQ----LVKEMQLKGLKPNLYTYSSII 187

Query: 201 SILGRLGKV--------DLAK------NIFETALNEGY---GNT---------------- 227
            +L + GKV        ++ K      ++  T L +G+   GNT                
Sbjct: 188 LLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIV 247

Query: 228 --VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
               AFSALI     SG   EA  +FN M +   +P+ VTY A+ID   K G + K    
Sbjct: 248 PDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLG-EMKKAFF 306

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           + + M++ G+ P+ +T+ +L     + G  + A  L +EM  +G+  +I TYNT+++ +C
Sbjct: 307 LHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLC 366

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K   +  A ++M EM    + P+ +TY+T++D Y K G +  A  +  EM   G+    V
Sbjct: 367 KAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVV 426

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           ++N +++     G+ E+   + K M   GI  +A TYN+++  Y  +        ++  M
Sbjct: 427 TFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGM 486

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
            A  V P+  TY+ LI  + K    KEA  + +E  +         Y+ALI    K   +
Sbjct: 487 CAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKL 546

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
             A  L +EM +EG+  +   YN  +D        E T++
Sbjct: 547 LEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLE 586



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 172/339 (50%), Gaps = 3/339 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+I  L   GKV  A  +F   + +G+      ++ALI  Y + G  ++A  + N M +
Sbjct: 254 SALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQ 313

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             L PN+VTY A+ D   K G +     E+  +M R G+Q +  T+N+++  +C  G + 
Sbjct: 314 IGLTPNVVTYTALADGLCKSG-ELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNIL 372

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +A + L  EM   G+  D  TY TL+DA  K  +M  A E++ EM  + + P VVT++ +
Sbjct: 373 QAVK-LMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVL 431

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ++G   +G+L+D   +   M   GI  +  +YN+++  Y        +  + + M + G+
Sbjct: 432 MNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGV 491

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D+ TYN L+ G+ K     E   + ++M     +    +Y+ LI  + K     EA Q
Sbjct: 492 VPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQ 551

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           +F E ++ GL A   +Y+  +D   + G +E+ + L DE
Sbjct: 552 LFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDE 590



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 132/275 (48%), Gaps = 3/275 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+   L + G++D A  +      +G    +  ++ +++   ++G   +A+ +   MK 
Sbjct: 324 TALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKE 383

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             L P+ +TY  ++DA  K G +     E+  +ML  G+QP  +TFN L+  +C  G L 
Sbjct: 384 AGLHPDTITYTTLMDAYYKTG-EMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLE 442

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           +  R L   M+ +GI  +  TYN+++   C    M ++ EI   M A+ + P+  TY+ +
Sbjct: 443 DGER-LLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNIL 501

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G+ KA  + +A  +  EM      L   SYN ++  + K  +  EA  + +EM   G+
Sbjct: 502 IKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGL 561

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
              A  YN  +    ++G  +    + ++    C+
Sbjct: 562 VASAEIYNLFVDMNYEEGNMETTLELCDEAIEKCL 596


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 173/330 (52%), Gaps = 22/330 (6%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDA------------------CGKGGVDFKHVVEIF 287
           E ++    + R    P++VTYN +I                    C  G  D     EIF
Sbjct: 28  EGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCIIIDGLCKVGHED--EAKEIF 85

Query: 288 DDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           ++M   G+ P+ I+++SL+   C  G L E+ R LFNEMV +G+  ++  +N L+D +CK
Sbjct: 86  EEMKAQGMIPNVISYSSLVHGFCCAGKLEESKR-LFNEMVDQGVQPNLVQFNVLIDILCK 144

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++  A +++     + I  ++VTY+++IDG+ K G L  A  +F  M   G   + +S
Sbjct: 145 EGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEIS 204

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y  +++ Y K+ + EEA+ +  EM   G R +  TY+ LL G  + GK  +  ++F  MK
Sbjct: 205 YTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMK 264

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           A  +S +   Y   +D   K G+  EAM++F E K    K D   YS LID LCK G VE
Sbjct: 265 ASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVE 324

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            A     ++++EG++PNVVT N +I  F R
Sbjct: 325 IAWEFFKQLSQEGLQPNVVTCNIMIHGFCR 354



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 182/340 (53%), Gaps = 6/340 (1%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           A   +I    + G+  EA  +F  MK   + PN+++Y++++   C  G ++      +F+
Sbjct: 64  ATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESK--RLFN 121

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +M+  GVQP+ + FN L+ +  + G    A+ L    + RGI  D+ TYN+L+D  CK  
Sbjct: 122 EMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIG 181

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            +  A ++   MP+K    N ++Y+ +I+GY K  ++++A+N+++EM  +G   +  +Y+
Sbjct: 182 DLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYS 241

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+L+   + G+  +A  +   M++SGI  D+  Y   L G  K G   E   +F ++K+ 
Sbjct: 242 TLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSY 301

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
               +  +YS LID   K G  + A + F++  Q GL+ +VV  + +I   C+   V+ A
Sbjct: 302 NFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKA 361

Query: 529 VSLLDEMTK---EGIRPNVVTYNSIIDAFGRSATTECTVD 565
             L ++M K    G  P+++TYN+++  F  S   E  V+
Sbjct: 362 NILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVN 401



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 181/344 (52%), Gaps = 8/344 (2%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L ++G  D AK IFE    +G    V ++S+L+  +  +G  +E+  +FN M    
Sbjct: 68  IIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQG 127

Query: 259 LKPNLVTYNAVIDACGKGG--VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           ++PNLV +N +ID   K G  ++ K ++E+    ++ G+  D +T+NSL+    + G   
Sbjct: 128 VQPNLVQFNVLIDILCKEGKVIEAKKLLEV---TIQRGIILDLVTYNSLIDGFCKIGDLS 184

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +AR LF  M  +G + +  +Y  L++  CK  +++ A  +  EMP     PNV TYST++
Sbjct: 185 SARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLL 244

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G  + G++ DA  +F  MK  GI +D   Y   L    K G   EA+ +  E++S   +
Sbjct: 245 TGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFK 304

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  +Y+ L+ G  K GK +     F+Q+  + + PN++T + +I  + +     +A  +
Sbjct: 305 LDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANIL 364

Query: 497 FREFKQA---GLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           F + ++    G   D++ Y+ L+   C++  +E  V+LL +M K
Sbjct: 365 FEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFK 408



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 125/232 (53%), Gaps = 6/232 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I    ++G +  A+ +F +  ++G  +   +++ LI+ Y +    +EA++++N M +
Sbjct: 171 NSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQ 230

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
              +PN+ TY+ ++    + G       ++F  M  +G+  D   +   L  +C  G L+
Sbjct: 231 VGKRPNVKTYSTLLTGLLQTG-KVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLF 289

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA   LFNE+       D  +Y+ L+D +CK  ++++A+E   ++  + + PNVVT + M
Sbjct: 290 EAME-LFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIM 348

Query: 376 IDGYAKAGRLDDALNMFSEMKFL---GIGLDRVSYNTVLSIYAKLGRFEEAL 424
           I G+ +  ++D A  +F +M+ +   G   D ++YNT+L  + +  + EE +
Sbjct: 349 IHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVV 400



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 167/375 (44%), Gaps = 59/375 (15%)

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M    +SP++ T + + +      R+ + L   + +   G   D V+YNT++    ++ R
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
              A  +                  ++ G  K G  DE + +FE+MKA  + PN+++YS+
Sbjct: 61  ISVATCI------------------IIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSS 102

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           L+  +   G  +E+ ++F E    G++ ++V ++ LID LCK G V  A  LL+   + G
Sbjct: 103 LVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRG 162

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           I  ++VTYNS+ID F       C + D+         S+      S   K  +    +  
Sbjct: 163 IILDLVTYNSLIDGF-------CKIGDL---------SSARKLFLSMPSKGCEHNEISYT 206

Query: 600 QIIKVFGQL-VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
            +I  + ++   E+A                + ++ +M ++  +PNV T+S +L    + 
Sbjct: 207 ILINGYCKIWKVEEA----------------MNLYNEMPQVGKRPNVKTYSTLLTGLLQT 250

Query: 659 NSFEDASMLLEELRL----FDNQVYGV-AHGLLMGYRDNIWVQALSLFDEVKLMDSSTAS 713
               DA+ L   ++      D+ +Y +   GL    ++ +  +A+ LF+E+K  +     
Sbjct: 251 GKVGDANKLFGVMKASGISVDSCIYVIFLDGLC---KNGVLFEAMELFNELKSYNFKLDF 307

Query: 714 AFYNALTDMLWHFGQ 728
             Y+ L D L   G+
Sbjct: 308 ESYSRLIDGLCKAGK 322



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 6/171 (3%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           K  S +++ L + GKV  A  +F      G       +   +    ++G   EA+ +FN 
Sbjct: 238 KTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNE 297

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           +K YN K +  +Y+ +ID  C  G V+     E F  + + G+QP+ +T N ++    R 
Sbjct: 298 LKSYNFKLDFESYSRLIDGLCKAGKVEIAW--EFFKQLSQEGLQPNVVTCNIMIHGFCRV 355

Query: 313 GLWEAARNLF---NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
              + A  LF    +M   G   DI TYNTLL   C+  +++    ++ +M
Sbjct: 356 EQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 2/101 (1%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVV-EIF 287
           ++S LI    ++G  + A   F  + +  L+PN+VT N +I   C    VD  +++ E  
Sbjct: 309 SYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKM 368

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           + M  NG  PD IT+N+LL         E   NL ++M  R
Sbjct: 369 EKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 212/435 (48%), Gaps = 58/435 (13%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++S   +LG VD+AK+ F T L  G   +VY+ + LI+     G   EA+ + + M +
Sbjct: 245 NSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 304

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           + ++P+ VTYN ++      G+      E+  DML  G+ PD IT+  LL    + G  +
Sbjct: 305 HGVEPDSVTYNILVKGFHLLGM-ISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNID 363

Query: 317 AARNLFNEMVHRGID-QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
               L  +M+ RG + + I  Y+ +L  +CK  ++D A  +  ++ A  ++P++V YS +
Sbjct: 364 MGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIV 423

Query: 376 IDGYAKAGRLDDALNMFSEMKF--------------LGI--------------------- 400
           I G  K G+ D A+ ++ EM +              LG+                     
Sbjct: 424 IHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGD 483

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
            LD + YN V+  YAK G  EEAL + K    SGI  +  T+N+L+ GY K     E R+
Sbjct: 484 TLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARK 543

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + + +K   + P++++Y+TL+D Y+  G  K   ++ RE K  G+    V YS +   LC
Sbjct: 544 ILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLC 603

Query: 521 KNGLVESAVSLLDE------------MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
           +   +E+   +L E            M  EGI P+ +TYN+II          C V  + 
Sbjct: 604 RGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYL-------CRVKHLS 656

Query: 569 R--DLGKQKESANLD 581
           R  +L K+ +S NLD
Sbjct: 657 RAFELFKKMKSQNLD 671



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 180/363 (49%), Gaps = 16/363 (4%)

Query: 205 RLGKVDLAKNIFETALNEGYG-NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
           +LG +D+   + +  L+ G+   ++  +S ++S   ++G   EA+S+F  ++ Y L P+L
Sbjct: 358 QLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDL 417

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS-LLAVCSRGGLWEAARNLF 322
           V Y+ VI    K G  F   V ++D+M    + P+  T  + +L +C +G L EA R+L 
Sbjct: 418 VAYSIVIHGLCKLG-KFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEA-RSLL 475

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           + ++  G   DI  YN ++D   K   ++ A E+        I+PNV T++++I GY K 
Sbjct: 476 DSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKT 535

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
             + +A  +   +K  G+    VSY T++  YA  G  +    + +EM++ GI    VTY
Sbjct: 536 QNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTY 595

Query: 443 NALLGGYGKQGKYDEVRRMFEQ------------MKADCVSPNLLTYSTLIDVYSKGGLY 490
           + +  G  +  K +   ++  +            M+++ ++P+ +TY+T+I    +    
Sbjct: 596 SVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHL 655

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             A ++F++ K   L      Y+ LID+LC  G +  A   L  + K  +  +   Y ++
Sbjct: 656 SRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTV 715

Query: 551 IDA 553
           I A
Sbjct: 716 IKA 718



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 132/535 (24%), Positives = 243/535 (45%), Gaps = 55/535 (10%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIF 287
           + +S ++    R    ++A+    + +  ++ P++V++N+++ + C  G VD       F
Sbjct: 207 HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAK--SFF 264

Query: 288 DDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             +L+ G+ P   + N L+  +C  G + EA   L ++M   G++ D  TYN L+     
Sbjct: 265 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALE-LASDMNKHGVEPDSVTYNILVKGFHL 323

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR-V 405
              +  A E++ +M  K +SP+V+TY+ ++ G  + G +D  L +  +M   G  L   +
Sbjct: 324 LGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSII 383

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            Y+ +LS   K GR +EAL +  ++E+ G+  D V Y+ ++ G  K GK+D   R++++M
Sbjct: 384 PYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEM 443

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
               + PN  T   ++    + G+  EA  +      +G   D++LY+ +ID   K+G +
Sbjct: 444 CYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCI 503

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           E A+ L     + GI PNV T+NS+I  + ++                            
Sbjct: 504 EEALELFKVAIESGITPNVATFNSLIYGYCKT---------------------------- 535

Query: 586 QDDKDVQEAGRTDNQIIKVFGQL--VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
              +++ EA R    +IK++G +  V            C   I  I  + ++M    I P
Sbjct: 536 ---QNIAEA-RKILDVIKLYGLVPSVVSYTTLMDAYANC-GSIKSIEELRREMKAEGIPP 590

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEE--LRLFDNQVYG----------VAHGLLMGY-- 689
             VT+S I     R    E+ + +L E  L  F++ +            + +  ++ Y  
Sbjct: 591 TNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLC 650

Query: 690 RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQV 744
           R     +A  LF ++K  +    SA YN L D L  +G  R A   +   ++R V
Sbjct: 651 RVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNV 705



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 135/292 (46%), Gaps = 13/292 (4%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L + +I    + G ++ A  +F+ A+  G    V  F++LI  Y ++    EA  + + +
Sbjct: 489 LYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVI 548

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG-- 312
           K Y L P++V+Y  ++DA    G   K + E+  +M   G+ P  +T++ +     RG  
Sbjct: 549 KLYGLVPSVVSYTTLMDAYANCG-SIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWK 607

Query: 313 ----------GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
                      + E   ++  +M   GI  D  TYNT++  +C+   +  AFE+  +M +
Sbjct: 608 LENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKS 667

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
           +N+ P   TY+ +ID     G +  A      ++   + L + +Y TV+  +   G  E 
Sbjct: 668 QNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEM 727

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
           A+++  ++   G       Y+A++    ++    E +  F  M +  +SP+L
Sbjct: 728 AVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDL 779



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/398 (19%), Positives = 167/398 (41%), Gaps = 50/398 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ ++  L   G++  A++ +     +    N +  L + M+ +  + G +  A+++ ++
Sbjct: 420 YSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSR-TLGAIMLGLCQK-GMLLEARSLLDS 477

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            ++ G    +  ++ +I  Y +SG  +EA+ +F       + PN+ T+N++I    K   
Sbjct: 478 LISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQ- 536

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           +     +I D +   G+ P  +++ +L+   +  G  ++   L  EM   GI     TY+
Sbjct: 537 NIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYS 596

Query: 339 TLLDAICKGAQMDLAFEIMAE------------MPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +   +C+G +++   +++ E            M ++ I+P+ +TY+T+I    +   L 
Sbjct: 597 VIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLS 656

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            A  +F                                   K+M+S  +   + TYN L+
Sbjct: 657 RAFELF-----------------------------------KKMKSQNLDPTSATYNILI 681

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
                 G   +  R    ++   VS +   Y+T+I  +   G  + A+ +F +    G  
Sbjct: 682 DSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFN 741

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
             +  YSA+I+ LC+  L   +      M   GI P++
Sbjct: 742 VSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDL 779


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 192/353 (54%), Gaps = 3/353 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GKV  A    +  L +G+  +  ++  LI+   + G  + AI +   ++R++++PN+V Y
Sbjct: 142 GKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIY 201

Query: 267 NAVID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           + +ID  C    VD  +  +++ +M+  G+ PD +T++ L++     G    A +L NEM
Sbjct: 202 SMIIDRLCKDTLVDEAY--DLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEM 259

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           V   I+ DI+TY  L+DA+CK  ++  A  ++A M    ++ +VV YST++DGY     +
Sbjct: 260 VLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEV 319

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           ++A  +F  M  +G+  D   Y+ +++   K+ R +EAL + +E+    +  D VTY +L
Sbjct: 320 NNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSL 379

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +    K G+   V  +F++M      P+++TY+ LID   K G    A+ +F + K   +
Sbjct: 380 IDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAI 439

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           + +V  ++ L+D LCK G +++A+    ++  +G   NV TY  +I+   +  
Sbjct: 440 RPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEG 492



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 198/395 (50%), Gaps = 3/395 (0%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           +L  L N   +  AI  +   ++  E + D   L + +I+     G+V LA +     L 
Sbjct: 64  ILISLVNVKRYPTAISLYK-QMELSEVEPDYFTL-NIIINCFCHFGQVVLAFSGVSKILK 121

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
            GY       + L+      G  +EA+   + +     + + ++Y  +I+   K G + +
Sbjct: 122 LGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIG-ETR 180

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             + +   + R  ++P+ + ++ ++    +  L + A +L+ EMV +GI  D+ TY+ L+
Sbjct: 181 AAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILV 240

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
              C   Q++ A +++ EM  +NI+P++ TY+ ++D   K G++ +A N+ + M    + 
Sbjct: 241 SGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVN 300

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
           LD V Y+T++  Y  +     A  V   M   G+  D   Y+ ++ G  K  + DE   +
Sbjct: 301 LDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNL 360

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           FE++    + P+ +TY++LID   K G       +F E    G   DV+ Y+ LIDALCK
Sbjct: 361 FEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCK 420

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           NG ++ A++L ++M  + IRPNV T+  ++D   +
Sbjct: 421 NGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCK 455



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 204/435 (46%), Gaps = 52/435 (11%)

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGV--DFKHVVEIFDDMLRNGVQPDRITFN 303
           AIS++  M+   ++P+  T N +I+  C  G V   F  V +I    L+ G QP+ IT N
Sbjct: 77  AISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKI----LKLGYQPNTITLN 132

Query: 304 SLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           +L+  +C  G + EA R   ++++ +G      +Y  L++ +CK  +   A  ++  +  
Sbjct: 133 TLMKGLCLEGKVKEALR-FHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIER 191

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
            +I PNVV YS +ID   K   +D+A ++++EM   GI  D V+Y+ ++S +  +G+   
Sbjct: 192 WSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNR 251

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A+ +  EM    I  D  TY  L+    K+GK  E   +   M   CV+ +++ YSTL+D
Sbjct: 252 AIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMD 311

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            Y        A ++F    Q G+  DV  YS +I+ LCK   V+ A++L +E+ ++ + P
Sbjct: 312 GYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVP 371

Query: 543 NVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESAN----LDAMCSQDDKDVQEAGR 596
           + VTY S+ID   +S       D  D   D G+  +       +DA+C          G 
Sbjct: 372 DTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKN--------GH 423

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
            D  I                              +F KM    I+PNV TF+ +L+   
Sbjct: 424 LDRAI-----------------------------ALFNKMKDQAIRPNVYTFTILLDGLC 454

Query: 657 RCNSFEDASMLLEEL 671
           +    ++A    ++L
Sbjct: 455 KVGRLKNALEFFQDL 469



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/543 (23%), Positives = 235/543 (43%), Gaps = 56/543 (10%)

Query: 37  PSSRPHWTSHKVSLTKPPLSPSPRNAPKPAATSTTVAPNPKPFH---------SLSPLPS 87
           P   P+   H  SL  PPL+ +  +A         V P P  FH         ++   P+
Sbjct: 19  PPFLPNLCFHSHSL--PPLTHNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPT 76

Query: 88  SKS--------ELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDD 139
           + S        E+ PD+    +       HFG+  +A S    ++          +  + 
Sbjct: 77  AISLYKQMELSEVEPDYFTL-NIIINCFCHFGQVVLAFSGVSKILK-------LGYQPNT 128

Query: 140 VSLGDILK------------KFE-------FKLCGADDYTFLLRELGNRGEWSKAIQCFA 180
           ++L  ++K            +F        F+L G   Y  L+  +   GE   AI+   
Sbjct: 129 ITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGIS-YGILINGVCKIGETRAAIR--- 184

Query: 181 FAVKREERKNDQGKLA--SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
             ++R ER + +  +   S +I  L +   VD A +++   + +G    V  +S L+S +
Sbjct: 185 -LLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGF 243

Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQP 297
              G    AI + N M   N+ P++ TY  ++DA C +G V  K    +   M++  V  
Sbjct: 244 CIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKV--KEAENVLAVMVKACVNL 301

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
           D + +++L+           A+ +F  M   G+  D+  Y+ +++ +CK  ++D A  + 
Sbjct: 302 DVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLF 361

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
            E+  KN+ P+ VTY+++ID   K+GR+    ++F EM   G   D ++YN ++    K 
Sbjct: 362 EEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKN 421

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G  + A+ +  +M+   IR +  T+  LL G  K G+       F+ +       N+ TY
Sbjct: 422 GHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTY 481

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           + +I+   K GL  EA+ +    +  G  +D V +  +I A       + A  L+ EM  
Sbjct: 482 TVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIA 541

Query: 538 EGI 540
            G+
Sbjct: 542 RGL 544



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 138/284 (48%), Gaps = 7/284 (2%)

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           V  F+ M      P    FN +L        +  A +L+ +M    ++ D FT N +++ 
Sbjct: 43  VSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINC 102

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
            C   Q+ LAF  ++++      PN +T +T++ G    G++ +AL    ++   G  L 
Sbjct: 103 FCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLS 162

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            +SY  +++   K+G    A+ + + +E   IR + V Y+ ++    K    DE   ++ 
Sbjct: 163 GISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYT 222

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M    +SP+++TYS L+  +   G    A+ +  E     +  D+  Y+ L+DALCK G
Sbjct: 223 EMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEG 282

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
            V+ A ++L  M K  +  +VV Y++++D +       C V++V
Sbjct: 283 KVKEAENVLAVMVKACVNLDVVVYSTLMDGY-------CLVNEV 319


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 133/535 (24%), Positives = 240/535 (44%), Gaps = 59/535 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +AMI  L + GKVD    +       G   TV  ++ L+ A  +SG  +EA  +   M++
Sbjct: 225 TAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQ 284

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P++VT+  +I+   +G   F  V  +  +M + GV P+ + +N L+    R G   
Sbjct: 285 GGMTPSVVTFGILINGLARGE-RFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCS 343

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA------------------ 358
            A  LF+EMV + +     TYN +  A+CK  +M+ A  I+                   
Sbjct: 344 QALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVV 403

Query: 359 ------------------EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
                             EM  + + PN    +  +    K G+  +A+ ++ +    G+
Sbjct: 404 AWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGL 463

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
           G++  + N ++    +    +EA  V + M + GI  D++TYN ++ G  K  K +E  +
Sbjct: 464 GVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIK 523

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +   M      P+L T++TL+  Y   G  +E   +  + K  GL+ D+V Y  +ID  C
Sbjct: 524 LHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHC 583

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESA 578
           K   +  A   L E+   G++PNV  YN++I  +GR+      +D VE  +  G Q  + 
Sbjct: 584 KAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNV 643

Query: 579 NLDA----MCS----QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEILCI 629
              +    MC     ++ K +    R +N  + V G  +         +  C+  +++  
Sbjct: 644 TYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIM-------IQGYCKLGKMVEA 696

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVYG 680
           +  F++M    I PN +T++ ++ A S+  + E+AS L +E+     + DN  YG
Sbjct: 697 VAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYG 751



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 171/335 (51%), Gaps = 5/335 (1%)

Query: 183 VKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSG 242
           V R  R ND   L +A +  L + GK   A  I+   LN+G G  +   +ALI       
Sbjct: 424 VTRGMRPND--PLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGK 481

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
           Y +EA  V  +M    ++ + +TYN +I  C K     +  +++  DM R G +PD  TF
Sbjct: 482 YMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDS-KMEEAIKLHGDMTRRGFKPDLFTF 540

Query: 303 NSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
           N+LL A C+ G + E   +L ++M   G+  DI +Y T++D  CK   +  A E + E+ 
Sbjct: 541 NTLLHAYCNLGKM-EETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELM 599

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            + + PNV  Y+ +I GY + G +  A++    MK  GI    V+Y +++      G  E
Sbjct: 600 DRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVE 659

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           EA  +  +   + +    + Y  ++ GY K GK  E    FE+M++  +SPN LTY+TL+
Sbjct: 660 EAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLM 719

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
             YSK G  +EA ++F E   +G+  D + Y  LI
Sbjct: 720 YAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 754



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 182/360 (50%), Gaps = 12/360 (3%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
            +A +    + G  QEA+ ++       L  NL T NA+I    +G    K   ++   M
Sbjct: 435 MTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKY-MKEATKVIQTM 493

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           L  G++ D IT+N ++  C +    E A  L  +M  RG   D+FT+NTLL A C   +M
Sbjct: 494 LNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKM 553

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           +  F ++ +M  + + P++V+Y T+IDG+ KA  +  A    +E+   G+  +   YN +
Sbjct: 554 EETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNAL 613

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +  Y + G    A+   + M+S+GI+   VTY +L+      G  +E + +F Q + + V
Sbjct: 614 IGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNV 673

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
              ++ Y+ +I  Y K G   EA+  F E +  G+  + + Y+ L+ A  K+G  E A  
Sbjct: 674 DLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASK 733

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT-VDDVERDLGKQKESANLDAMCSQDDK 589
           L DEM   G+ P+ +TY ++I          C+ V+ +++D+G   E ++     ++DD+
Sbjct: 734 LFDEMVGSGVIPDNITYGTLI--------ARCSEVNSLDKDIGHTAELSS--GALTKDDR 783



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 210/447 (46%), Gaps = 26/447 (5%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           ++ LI  + R G+C +A+ +F+ M    +KP  VTYN +  A  K G + +    I +DM
Sbjct: 329 YNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEG-EMERAERILEDM 387

Query: 291 LRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           L  G+      FN+++A +  R    E+  ++ NEMV RG+  +       +  +CKG +
Sbjct: 388 LSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGK 447

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              A  I  +   K +  N+ T + +I G  +   + +A  +   M   GI LD ++YN 
Sbjct: 448 HQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNI 507

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    K  + EEA+ +  +M   G + D  T+N LL  Y   GK +E   + +QMK + 
Sbjct: 508 MIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEG 567

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           + P++++Y T+ID + K    ++A +   E    GLK +V +Y+ALI    +NG +  A+
Sbjct: 568 LQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAI 627

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE--CTVDDVER----DLGKQKESANLDAM 583
             ++ M   GI+P  VTY S++     +   E   T+    R    DLG    +  +   
Sbjct: 628 DAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGY 687

Query: 584 CSQDD--------KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
           C            ++++  G + N++          K+G  ++ ++          +F +
Sbjct: 688 CKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASK----------LFDE 737

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFE 662
           M    + P+ +T+  ++  CS  NS +
Sbjct: 738 MVGSGVIPDNITYGTLIARCSEVNSLD 764



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 132/543 (24%), Positives = 232/543 (42%), Gaps = 80/543 (14%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR-YNLKPNLVT 265
           G +  A + F    + G   ++   +A + A  R+G    A  VF+ M+   N+  N  +
Sbjct: 164 GSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYS 223

Query: 266 YNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFN 323
           Y A+I A C  G VD     E+  ++ R G+QP  +T+N L+ A+C  G + EA R L  
Sbjct: 224 YTAMIKALCKAGKVDAG--FEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFR-LKG 280

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
            M   G+   + T+  L++ + +G +      ++ EM    +SPN V Y+ +I  + + G
Sbjct: 281 RMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKG 340

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG------------------------- 418
               AL +F EM    +    V+YN +     K G                         
Sbjct: 341 HCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFN 400

Query: 419 -----------RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
                      R E  + +  EM + G+R +     A +    K GK+ E   ++ +   
Sbjct: 401 TVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLN 460

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             +  NL T + LI    +G   KEA ++ +     G++ D + Y+ +I   CK+  +E 
Sbjct: 461 KGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEE 520

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
           A+ L  +MT+ G +P++ T+N+++ A+       C       +LGK +E+ +L       
Sbjct: 521 AIKLHGDMTRRGFKPDLFTFNTLLHAY-------C-------NLGKMEETFHL------L 560

Query: 588 DKDVQEAGRTDNQIIKVFGQLVAEKAGQGK-KENRCRQEILCILGVFQKMHKLKIKPNVV 646
           D+   E  + D   I  +G ++    G  K K+ R  +E L       ++    +KPNV 
Sbjct: 561 DQMKTEGLQPD---IVSYGTII---DGHCKAKDIRKAKEYL------TELMDRGLKPNVF 608

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKL 706
            ++A++    R      A   +E ++    Q   V +G LM      W+    L +E K 
Sbjct: 609 IYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLM-----YWMCHAGLVEEAKT 663

Query: 707 MDS 709
           + S
Sbjct: 664 IFS 666



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/536 (21%), Positives = 235/536 (43%), Gaps = 34/536 (6%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           +     I++  +   C+ A   F  +      P++ T NA ++A  + G       E+FD
Sbjct: 152 FLIHTFITSPAQGSLCRAA-DAFRVLSSRGAPPSIKTCNAFLEALVRAG-QLDAAREVFD 209

Query: 289 DMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           +M  +  V  +  ++ +++    + G  +A   +  E+   G+   + TYN L+DA+CK 
Sbjct: 210 EMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKS 269

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +++ AF +   M    ++P+VVT+  +I+G A+  R  +   +  EM+ LG+  + V Y
Sbjct: 270 GRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIY 329

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N ++  + + G   +AL +  EM    ++  AVTYN +     K+G+ +   R+ E M +
Sbjct: 330 NELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLS 389

Query: 468 DCVSPNLLTYSTLID-VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
             ++ +   ++T++  +  +    +  + I  E    G++ +  L +A +  LCK G  +
Sbjct: 390 IGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQ 449

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF--GRSATTECTVDDVERDLGKQKESANLDAM- 583
            AV +  +   +G+  N+ T N++I     G+       V     + G + +S   + M 
Sbjct: 450 EAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMI 509

Query: 584 --CSQDDKDVQEAGRTDNQIIK--------VFGQLVAEKAGQGKKENRCRQEILCILGVF 633
             C +D K ++EA +    + +         F  L+      GK E            + 
Sbjct: 510 RGCCKDSK-MEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEE--------TFHLL 560

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL--RLFDNQVYGVAHGLLMGYRD 691
            +M    ++P++V++  I++   +      A   L EL  R     V+ + + L+ GY  
Sbjct: 561 DQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVF-IYNALIGGYGR 619

Query: 692 NIWVQALSLFDEVKLMDSS---TASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQV 744
           N  +      D V+ M S+     +  Y +L   + H G    A+ +  + +   V
Sbjct: 620 NGDISG--AIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNV 673



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 124/243 (51%), Gaps = 1/243 (0%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           LGK++   ++ +    EG    + ++  +I  + ++   ++A      +    LKPN+  
Sbjct: 550 LGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFI 609

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           YNA+I   G+ G D    ++  + M  NG+QP  +T+ SL+      GL E A+ +F++ 
Sbjct: 610 YNALIGGYGRNG-DISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQA 668

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
               +D  +  Y  ++   CK  +M  A     EM ++ ISPN +TY+T++  Y+K+G  
Sbjct: 669 RENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNS 728

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           ++A  +F EM   G+  D ++Y T+++  +++   ++ +    E+ S  + KD   YN L
Sbjct: 729 EEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNIL 788

Query: 446 LGG 448
             G
Sbjct: 789 SNG 791


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 200/396 (50%), Gaps = 36/396 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A++S   ++G VD+AK+ F   +  G    VY+++ L+     +G  +EA+   N M+ 
Sbjct: 274 NALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMEN 333

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           + ++P++VTYN + +     G+      ++   ML NG+ PD +T+  L+    + G  E
Sbjct: 334 HGVEPDIVTYNILANGFRILGL-ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIE 392

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            +  L  +M+ +G+   I TY  LL ++CK  ++D A  ++ EM    + P+++TYS +I
Sbjct: 393 ESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLI 452

Query: 377 DGYAKAGRLDDALNMFSEM--------KFL---------------------------GIG 401
            G  K G +++A+ ++ EM         F+                            + 
Sbjct: 453 HGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVA 512

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + + YN ++  YAKLG   EA+   K++   GI    VT+N+L+ G+ K+GK  E  ++
Sbjct: 513 EEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKL 572

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            + +K   + P  +TY+TL++ Y + G       +  E +   +K   + Y+ ++  LCK
Sbjct: 573 LDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCK 632

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            G +  +V LL  M   G+ P+ +TYN++I +F ++
Sbjct: 633 EGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKA 668



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 236/487 (48%), Gaps = 23/487 (4%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L R  ++  A         E +G +V +F+AL+S + + G    A S F  M +Y 
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYG 300

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           L P++ +YN ++      G   +  +E  +DM  +GV+PD +T+N L       GL   A
Sbjct: 301 LLPDVYSYNILLHGLCVAG-SMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGA 359

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +   M+  G++ D+ TY  L+   C+   ++ +F++  +M ++ +  ++VTY+ ++  
Sbjct: 360 WKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSS 419

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K+GR+D+A+ +  EM+ +G+  D ++Y+ ++    K G  EEA+ + +EM S  I  +
Sbjct: 420 LCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPN 479

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           +   +A++ G  ++G   E +  F+ +    V+  ++ Y+ +ID Y+K G   EA++ ++
Sbjct: 480 SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYK 539

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +  + G+   +V +++LI   CK G +  AV LLD +   G+ P  VTY ++++ +    
Sbjct: 540 QIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEG 599

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
                 D +     K  +   +        K + + GR    +     QL+     +G  
Sbjct: 600 DMHSMFDMLHEMEAKAIKPTQITYTVVV--KGLCKEGRLHESV-----QLLKYMYARGLF 652

Query: 619 ENRCRQEILCILGVFQKMHKLK-------------IKPNVVTFSAILNACSRCNSFEDAS 665
            ++       ++  F K H L+             ++P+ VT++ ++N      + +DA 
Sbjct: 653 PDQITYNT--VIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDAD 710

Query: 666 MLLEELR 672
            LL  L+
Sbjct: 711 RLLVTLQ 717



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 143/620 (23%), Positives = 272/620 (43%), Gaps = 65/620 (10%)

Query: 181 FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           F + + +  N Q  +A+   S+L  L   D+  +++      G     Y    LI    R
Sbjct: 189 FVLAKMKVLNLQVSIATYN-SLLYNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCR 247

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDR 299
               Q+A++           P++V++NA++   C  G VD       F  M++ G+ PD 
Sbjct: 248 QSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAK--SFFCMMIKYGLLPDV 305

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
            ++N LL      G  E A    N+M + G++ DI TYN L +       +  A++++  
Sbjct: 306 YSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQR 365

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M    ++P++VTY+ +I G+ + G ++++  +  +M   G+ L  V+Y  +LS   K GR
Sbjct: 366 MLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGR 425

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            +EA+++  EME  G++ D +TY+ L+ G  K+G  +E   ++E+M +  + PN    S 
Sbjct: 426 IDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSA 485

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +I    + G   EA   F    ++ +  +++LY+ +ID   K G +  AV    ++ ++G
Sbjct: 486 IISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKG 545

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           I P +VT+NS+I  F +               GK  E+  L                   
Sbjct: 546 ISPTIVTFNSLIYGFCKK--------------GKLAEAVKL------------------L 573

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
             IKV G +             C + ++  +  +  +M    IKP  +T++ ++    + 
Sbjct: 574 DTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKE 633

Query: 659 NSFEDASMLLEELR---LFDNQV--------YGVAHGLLMGYRDNIWVQALSLFDEVKLM 707
               ++  LL+ +    LF +Q+        +  AH L          +A  L +++   
Sbjct: 634 GRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDL---------QKAFQLHNQMLQH 684

Query: 708 DSSTASAFYNALTDMLWHFGQKRGAQ--LVVLEGKRRQVWENVWSESCLDLHLMSSGAAR 765
               +   YN L + L  +G  + A   LV L+ +  ++ +  ++       ++ +  A+
Sbjct: 685 SLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTT------IIKAHCAK 738

Query: 766 AMVHAWLLNIHSIVFEGHEL 785
             V   L+  H +V  G E+
Sbjct: 739 GDVQNALVFFHQMVERGFEV 758



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 177/363 (48%), Gaps = 3/363 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L + G V+ A  ++E   ++      +  SA+IS     G   EA   F+S+ +
Sbjct: 449 SVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTK 508

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
            ++   ++ YN +ID   K G +    V  +  ++  G+ P  +TFNSL+   C +G L 
Sbjct: 509 SDVAEEIILYNIMIDGYAKLG-NIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLA 567

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA + L    VH G+     TY TL++  C+   M   F+++ EM AK I P  +TY+ +
Sbjct: 568 EAVKLLDTIKVH-GLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVV 626

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G  K GRL +++ +   M   G+  D+++YNTV+  + K    ++A  +  +M    +
Sbjct: 627 VKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSL 686

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           +   VTYN L+ G    G   +  R+   ++   +    + Y+T+I  +   G  + A+ 
Sbjct: 687 QPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALV 746

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            F +  + G +  +  YSA+I+ LCK  L+  A      M   GI P+      +++AF 
Sbjct: 747 FFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFH 806

Query: 556 RSA 558
           RS 
Sbjct: 807 RSG 809



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 167/341 (48%), Gaps = 39/341 (11%)

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN 293
           L  AY R+    +A+ V   MK  NL+ ++ TYN+++        + +H   ++D     
Sbjct: 174 LACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLL-------YNLRHTDIMWD----- 221

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
                                      ++NE+   G+ Q+ +T   L+D +C+ +++  A
Sbjct: 222 ---------------------------VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDA 254

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
              + E   +   P+VV+++ ++ G+ K G +D A + F  M   G+  D  SYN +L  
Sbjct: 255 VTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHG 314

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
               G  EEAL    +ME+ G+  D VTYN L  G+   G      ++ ++M  + ++P+
Sbjct: 315 LCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPD 374

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           L+TY+ LI  + + G  +E+ ++  +    GLK  +V Y+ L+ +LCK+G ++ AV LL 
Sbjct: 375 LVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLH 434

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           EM   G++P+++TY+ +I    +    E  ++  E    K+
Sbjct: 435 EMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR 475



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 151/313 (48%), Gaps = 5/313 (1%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L + MI    +LG +  A   ++  + +G   T+  F++LI  + + G   EA+ + +++
Sbjct: 517 LYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI 576

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
           K + L P  VTY  +++  C +G  D   + ++  +M    ++P +IT+  ++  +C  G
Sbjct: 577 KVHGLVPTSVTYTTLMNGYCEEG--DMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEG 634

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            L E+ + L   M  RG+  D  TYNT++ + CK   +  AF++  +M   ++ P+ VTY
Sbjct: 635 RLHESVQ-LLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTY 693

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +I+G    G L DA  +   ++   I L +V+Y T++  +   G  + AL+   +M  
Sbjct: 694 NVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVE 753

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G       Y+A++    K+    + +  F  M    + P+      +++ + + G    
Sbjct: 754 RGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNS 813

Query: 493 AMQIFREFKQAGL 505
             +IF    + GL
Sbjct: 814 VFEIFAMMIKCGL 826



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 93/405 (22%), Positives = 164/405 (40%), Gaps = 65/405 (16%)

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
           + + ++ L    SR  +   A  +  +M    +   I TYN+LL  +      D+ +++ 
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVY 223

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
            E+ A  +  N  T   +IDG  +  RL DA+    E      G   VS+N ++S + K+
Sbjct: 224 NEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKM 283

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G  + A      M   G+  D  +YN LL G    G  +E       M+   V P+++TY
Sbjct: 284 GSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTY 343

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           + L + +   GL   A ++ +     GL  D+V Y+ LI   C+ G +E +  L ++M  
Sbjct: 344 NILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLS 403

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
           +G++ ++VTY  ++ +  +S                                     GR 
Sbjct: 404 QGLKLSIVTYTVLLSSLCKS-------------------------------------GRI 426

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEIL----CILG-------VFQKMHKLKIKPNVV 646
           D  +I     L+ E    G K +     +L    C  G       ++++M   +I PN  
Sbjct: 427 DEAVI-----LLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSF 481

Query: 647 TFSAILNACSRCNSFEDASMLL---------EELRLFDNQVYGVA 682
             SAI++      +  +A M           EE+ L++  + G A
Sbjct: 482 VCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYA 526


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 180/342 (52%), Gaps = 2/342 (0%)

Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV 283
           Y  T++ ++ +I+   R+    +A  V   M   ++ PN+ TY  +++   +     K  
Sbjct: 84  YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSN-KTKLA 142

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
            E+F +M RNG +P+ IT+ +L+   SR G  + A  +  E     +  D+ T  T++  
Sbjct: 143 REVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGG 202

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL-GIGL 402
           +CK +++D A + M EM    + PN VTYS ++ G+ + G LD  +  F E K   G  L
Sbjct: 203 LCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSL 262

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           +  +Y   L    K G  + A    +E+  SG+  D VTY+ L+  + + G++D    + 
Sbjct: 263 EAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELL 322

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           E M+ + V P+++TYSTLI+V  K   +++A ++    + AG   +VV Y++++D LCK+
Sbjct: 323 EDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKS 382

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
           G ++    + + M K    P+VVTY+ I++   ++   +  V
Sbjct: 383 GKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAV 424



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 188/396 (47%), Gaps = 46/396 (11%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           AK +  + +  G      AF+ L +   R     E + +F  +    +     TY  V+D
Sbjct: 3   AKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGV-QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
             CG G  +    +E+  ++  +GV  P    +N ++    R      A  +  +MV   
Sbjct: 63  GLCGAGMAN--QALELVREL--SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEES 118

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           I  ++FTY  LL+ +C+  +  LA E+  EM      PN +TY T+I   ++AG +D+AL
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL 178

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            +  E + L +  D ++  T++    K  R ++AL   +EM   G+R + VTY+ L+ G+
Sbjct: 179 RVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGF 238

Query: 450 GKQGKYDEVRRMFEQMKAD-----------------C-------------------VSPN 473
            + G+ D V R FE+ KA                  C                   V P+
Sbjct: 239 RQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPD 298

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           ++TYS LI+ +++ G +  ++++  + ++ G+K DVV YS LI+ LCK    + A  LL+
Sbjct: 299 VVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLE 358

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
            M   G  PNVVTYNS++D   +S      +D+V R
Sbjct: 359 LMEAAGSPPNVVTYNSVMDGLCKSG----KMDEVHR 390



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 185/370 (50%), Gaps = 35/370 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L R  +V  A  + E  + E     V+ ++ L++   RS   + A  VF  MKR
Sbjct: 92  NGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKR 151

Query: 257 YNLKPNLVTYNAVIDACGKGG-VD---------------------------------FKH 282
              KPN +TY  +I    + G +D                                    
Sbjct: 152 NGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDD 211

Query: 283 VVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            ++  ++M + GV+P+ +T+++L+      G L    R    E   +G   +   Y   L
Sbjct: 212 ALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYL 271

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           DA+CK   +D A + + E+    + P+VVTYS +I+ +A+AG+ D +L +  +M+  G+ 
Sbjct: 272 DALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVK 331

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D V+Y+T++++  K  +F++A  + + ME++G   + VTYN+++ G  K GK DEV R+
Sbjct: 332 PDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRV 391

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           +E M     SP+++TYS +++  SK G+   A+++F   K +    D   YS +I +LC+
Sbjct: 392 YEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCR 451

Query: 522 NGLVESAVSL 531
            G +E A  +
Sbjct: 452 AGKLEEACGM 461



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 201/408 (49%), Gaps = 26/408 (6%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI-DQDIFTYN 338
           F  VV +F  +   GV     T+  ++      G+   A  L  E+   G+    +F YN
Sbjct: 35  FSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVREL--SGVYTPTLFIYN 92

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            ++  +C+ +++  A++++ +M  ++I PNV TY+ +++G  ++ +   A  +F EMK  
Sbjct: 93  GIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRN 152

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   + ++Y T++   ++ G  +EAL V  E  S  +  D +T   ++GG  K  + D+ 
Sbjct: 153 GCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDA 212

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK-QAGLKADVVLYSALID 517
            +  E+M+   V PN +TYS L+  + + G     ++ F E K + G   +   Y   +D
Sbjct: 213 LKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLD 272

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQK 575
           ALCK G ++ A   ++E+ + G+ P+VVTY+ +I+ F R+   + +++ +E  R  G + 
Sbjct: 273 ALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKP 332

Query: 576 E----SANLDAMCSQDD-------KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
           +    S  ++ +C +          ++ EA  +   ++  +  ++      GK +   R 
Sbjct: 333 DVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVV-TYNSVMDGLCKSGKMDEVHR- 390

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                  V++ M K +  P+VVT+S I+N  S+    + A  L E ++
Sbjct: 391 -------VYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIK 431



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 170/374 (45%), Gaps = 38/374 (10%)

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AA+ L   +V  G+  D   +  L   + + ++      +   + ++ +     TY  ++
Sbjct: 2   AAKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRV-SYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           DG   AG  + AL +  E+   G+    +  YN +++   +  R  +A  V ++M    I
Sbjct: 62  DGLCGAGMANQALELVRELS--GVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESI 119

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +  TY  LL G  +  K    R +F++MK +   PN +TY TLI   S+ G   EA++
Sbjct: 120 VPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALR 179

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +  E +   L  DV+  + ++  LCK   ++ A+  ++EM + G+RPN VTY++++  F 
Sbjct: 180 VMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFR 239

Query: 556 RSATTECTVDDVERDLGKQKESAN-------LDAMCS-----QDDKDVQEAGR------- 596
           +    +  +   E +  ++  S         LDA+C      +  K V+E  +       
Sbjct: 240 QHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDV 299

Query: 597 -TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
            T + +I  F      +AGQ              L + + M +  +KP+VVT+S ++N  
Sbjct: 300 VTYSMLINTFA-----RAGQFDAS----------LELLEDMRRNGVKPDVVTYSTLINVL 344

Query: 656 SRCNSFEDASMLLE 669
            +   F+DA  LLE
Sbjct: 345 CKERKFQDAFRLLE 358



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 150/320 (46%), Gaps = 10/320 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGK---VDLAKNI 215
           Y  L++ L   GE  +A++     V  E+R  +         +I+G L K   +D A   
Sbjct: 161 YGTLIQHLSRAGEIDEALR-----VMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKF 215

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK-RYNLKPNLVTYNAVIDACG 274
            E     G       +S L+  + + G     I  F   K R         Y   +DA  
Sbjct: 216 MEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALC 275

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K G       +  +++ ++GV PD +T++ L+   +R G ++A+  L  +M   G+  D+
Sbjct: 276 KAGY-LDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDV 334

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TY+TL++ +CK  +   AF ++  M A    PNVVTY++++DG  K+G++D+   ++  
Sbjct: 335 VTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEM 394

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M       D V+Y+ +++  +K G  + A+ + + ++SS    DA  Y+ ++    + GK
Sbjct: 395 MLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGK 454

Query: 455 YDEVRRMFEQMKADCVSPNL 474
            +E   M+  M+      N+
Sbjct: 455 LEEACGMYHGMEVTVAGDNI 474


>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
 gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
          Length = 425

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 178/330 (53%), Gaps = 1/330 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V   +A+I+AYGRS    + +  F  + ++  KPN  TY  VI +  K G +    +E+ 
Sbjct: 14  VLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAG-NVVLAMELL 72

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           D M++ G++PD +  N +L    +  + + A  LF  M   G   D +TY  L+ ++ + 
Sbjct: 73  DKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRC 132

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            + + A  +  EM  +  +P+   Y+ +ID Y KAGR++ A+ +  +M    +  D  + 
Sbjct: 133 KRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTL 192

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N++++  ++ GR E A  + + M+ SG+  + V++NA+L   GK GK     +  ++M+A
Sbjct: 193 NSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEA 252

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + PN +T++TLI+   +     EA ++ +E + AGL  DV  Y+ +I+A  K G +  
Sbjct: 253 RGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGK 312

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           A  +  +M K G   NVVTYN +IDA  ++
Sbjct: 313 AFEMFGDMEKAGCSANVVTYNLLIDALVKA 342



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 196/375 (52%), Gaps = 1/375 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           +++A+I+  GR  ++    + F+     G     Y +  +I +  ++G    A+ + + M
Sbjct: 16  VSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKM 75

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
            +  L+P+ +  N V+D  GK  +      ++F  M   G   D  T+  L+    R   
Sbjct: 76  IKTGLEPDTLLCNVVLDGLGKANM-MDEACKLFASMKSMGCPADDYTYAILIRSLGRCKR 134

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E A  LF+EM  RG       Y  ++D  CK  +++ A  ++ +M  KN++P+  T ++
Sbjct: 135 DEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNS 194

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I   ++ GR + A  +F  MK  G+ ++ VS+N +L    K G+   A     EME+ G
Sbjct: 195 LITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARG 254

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I+ +++T+N L+   G+     E  ++ ++M++  ++P++ TY+ +I+ ++K G   +A 
Sbjct: 255 IKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAF 314

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++F + ++AG  A+VV Y+ LIDAL K G  + A  +  +M K+GI P+ +T   +    
Sbjct: 315 EMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLA 374

Query: 555 GRSATTECTVDDVER 569
           G+   +  ++D+ E+
Sbjct: 375 GKCKLSGISLDENEQ 389



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/421 (20%), Positives = 171/421 (40%), Gaps = 64/421 (15%)

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           +   N ++ A  + +++    +   E+      PN  TY  +I    KAG +  A+ +  
Sbjct: 14  VLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLD 73

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           +M   G+  D +  N VL    K    +EA  +   M+S G   D  TY  L+   G+  
Sbjct: 74  KMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCK 133

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           + +E   +F++M+    +P+   Y+ +ID+Y K G  + AM + ++     L  D    +
Sbjct: 134 RDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLN 193

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           +LI A+ + G  E A  + + M K G+  N V++N+++D  G++                
Sbjct: 194 SLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAG--------------- 238

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
            K       M   + + ++    T N +I   G+  A+ A +  K             V 
Sbjct: 239 -KVGLAYQFMDEMEARGIKPNSITFNTLINCLGR--AKYASEAYK-------------VL 282

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNI 693
           Q+M    + P+V T++ ++ A ++  +                          MG     
Sbjct: 283 QEMRSAGLTPDVFTYTCMIEAFAKAGN--------------------------MG----- 311

Query: 694 WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESC 753
             +A  +F +++    S     YN L D L   G+ + A+ +  + K++ +  +  + + 
Sbjct: 312 --KAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATV 369

Query: 754 L 754
           L
Sbjct: 370 L 370


>gi|299469655|emb|CBN76509.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 787

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 183/369 (49%), Gaps = 6/369 (1%)

Query: 188 RKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEA 247
           R N Q  LA+  +   G   + + A ++  +    G       ++  I A GR      A
Sbjct: 351 RPNTQTCLAA--VRAAGDRDRGEQAVSVLRSMSEAGVAAEAKCYAVTIKACGRGRRWARA 408

Query: 248 ISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA 307
           + +   M++  ++P ++ Y+A I ACG G   ++  V +  +M   GV P  ++++  +A
Sbjct: 409 LELLREMEKNGVEPIVMGYDACIAACGDG-KQWEQAVALLREMPTVGVTPTVVSYSHAIA 467

Query: 308 VCSRGGLWEAARNLFNEMVHR-GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
            C +   W+ A  L  EM    GI+ D   YN  + A+ +G Q ++A  ++ EMP+  + 
Sbjct: 468 ACGQSYQWKPALELLREMPQEAGINPDAVCYNNCMTALGRGLQWEMALTLLREMPSVGLP 527

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKF-LGIGLDRVSYNTVLSIYAKLGRFEEALL 425
               +Y+  I     AG    A+ +  EM+  L +  + +SY   ++   K  ++++AL 
Sbjct: 528 IKAQSYTVAIKACGDAGEGKPAVALLREMQAELSVPPNVISYTAAIAACGKGDQWKQALE 587

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + +EM S G+  +  TY A +   G  GK++E   +  +M      PN+ +Y+  I    
Sbjct: 588 LLREMASMGVSPNDRTYTAAITACGNSGKWEEALSLLREMPTMGADPNIASYTATIKACG 647

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK-EGIRPNV 544
            GG ++ A+++FRE   AG+ ADV  Y+A + A   +G V+ AV LL EM    G+ PNV
Sbjct: 648 NGGQWERAVELFRELPSAGITADVQAYNACVQACGNSGAVDQAVELLREMAPAAGLEPNV 707

Query: 545 VTYNSIIDA 553
            TYN+ + A
Sbjct: 708 FTYNAALMA 716



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 207/479 (43%), Gaps = 56/479 (11%)

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG-----VDF 280
           N+++   A+ +A   SG   EA+ +   M+   ++PN++ YN  I ACG GG     VD 
Sbjct: 283 NSIHYVCAM-TACKISGMGAEAVGLLREMQAAGIEPNVICYNTAIAACGTGGQSEVAVDL 341

Query: 281 -----------------------------KHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
                                        +  V +   M   GV  +   +   +  C R
Sbjct: 342 LEEMNALGVRPNTQTCLAAVRAAGDRDRGEQAVSVLRSMSEAGVAAEAKCYAVTIKACGR 401

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
           G  W  A  L  EM   G++  +  Y+  + A   G Q + A  ++ EMP   ++P VV+
Sbjct: 402 GRRWARALELLREMEKNGVEPIVMGYDACIAACGDGKQWEQAVALLREMPTVGVTPTVVS 461

Query: 372 YSTMIDGYAKAGRLDDALNMFSEM-KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           YS  I    ++ +   AL +  EM +  GI  D V YN  ++   +  ++E AL + +EM
Sbjct: 462 YSHAIAACGQSYQWKPALELLREMPQEAGINPDAVCYNNCMTALGRGLQWEMALTLLREM 521

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD-CVSPNLLTYSTLIDVYSKGGL 489
            S G+   A +Y   +   G  G+      +  +M+A+  V PN+++Y+  I    KG  
Sbjct: 522 PSVGLPIKAQSYTVAIKACGDAGEGKPAVALLREMQAELSVPPNVISYTAAIAACGKGDQ 581

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
           +K+A+++ RE    G+  +   Y+A I A   +G  E A+SLL EM   G  PN+ +Y +
Sbjct: 582 WKQALELLREMASMGVSPNDRTYTAAITACGNSGKWEEALSLLREMPTMGADPNIASYTA 641

Query: 550 IIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD--NQIIKVFGQ 607
            I A G     E  V+     L ++  SA + A     +  VQ  G +   +Q +++  +
Sbjct: 642 TIKACGNGGQWERAVE-----LFRELPSAGITADVQAYNACVQACGNSGAVDQAVELLRE 696

Query: 608 LVAEKAGQGKK---ENRCRQEILC--------ILGVFQKMHKLKIKPNVVTFSAILNAC 655
           + A  AG        N       C         L + ++M    I PN VT  + L AC
Sbjct: 697 M-APAAGLEPNVFTYNAALMACSCPDGGRWGKALELLEEMAWRGIAPNAVTHESALAAC 754



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 124/522 (23%), Positives = 223/522 (42%), Gaps = 36/522 (6%)

Query: 210 DLAKNIFETALN-EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           D A+ +   AL   G  +TV   +A+++ +   G  Q  + V   M+   L P+ +TY  
Sbjct: 196 DEAERVLRQALECPGVVDTVMC-NAVLNTFAADGRWQVVLEVMRQMREAGLTPDALTYTN 254

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
            I ACGKG  +++  V +  +M  +GV+ + I +   +  C   G+   A  L  EM   
Sbjct: 255 AIKACGKG-REWRRSVALLKEMSAHGVELNSIHYVCAMTACKISGMGAEAVGLLREMQAA 313

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           GI+ ++  YNT + A   G Q ++A +++ EM A  + PN  T    +       R + A
Sbjct: 314 GIEPNVICYNTAIAACGTGGQSEVAVDLLEEMNALGVRPNTQTCLAAVRAAGDRDRGEQA 373

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           +++   M   G+  +   Y   +    +  R+  AL + +EME +G+    + Y+A +  
Sbjct: 374 VSVLRSMSEAGVAAEAKCYAVTIKACGRGRRWARALELLREMEKNGVEPIVMGYDACIAA 433

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ-AGLKA 507
            G   ++++   +  +M    V+P +++YS  I    +   +K A+++ RE  Q AG+  
Sbjct: 434 CGDGKQWEQAVALLREMPTVGVTPTVVSYSHAIAACGQSYQWKPALELLREMPQEAGINP 493

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           D V Y+  + AL +    E A++LL EM   G+     +Y   I A G            
Sbjct: 494 DAVCYNNCMTALGRGLQWEMALTLLREMPSVGLPIKAQSYTVAIKACG------------ 541

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
             D G+ K +  L        +++Q        +I     + A   G   K+        
Sbjct: 542 --DAGEGKPAVAL-------LREMQAELSVPPNVISYTAAIAACGKGDQWKQ-------- 584

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF--DNQVYGVAHGL 685
             L + ++M  + + PN  T++A + AC     +E+A  LL E+     D  +      +
Sbjct: 585 -ALELLREMASMGVSPNDRTYTAAITACGNSGKWEEALSLLREMPTMGADPNIASYTATI 643

Query: 686 LMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
                   W +A+ LF E+     +     YNA      + G
Sbjct: 644 KACGNGGQWERAVELFRELPSAGITADVQAYNACVQACGNSG 685



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 171/368 (46%), Gaps = 3/368 (0%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I+  G  G+ ++A ++ E     G         A + A G     ++A+SV  SM    +
Sbjct: 326 IAACGTGGQSEVAVDLLEEMNALGVRPNTQTCLAAVRAAGDRDRGEQAVSVLRSMSEAGV 385

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
                 Y   I ACG+G   +   +E+  +M +NGV+P  + +++ +A C  G  WE A 
Sbjct: 386 AAEAKCYAVTIKACGRG-RRWARALELLREMEKNGVEPIVMGYDACIAACGDGKQWEQAV 444

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYSTMIDG 378
            L  EM   G+   + +Y+  + A  +  Q   A E++ EMP +  I+P+ V Y+  +  
Sbjct: 445 ALLREMPTVGVTPTVVSYSHAIAACGQSYQWKPALELLREMPQEAGINPDAVCYNNCMTA 504

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS-GIRK 437
             +  + + AL +  EM  +G+ +   SY   +      G  + A+ + +EM++   +  
Sbjct: 505 LGRGLQWEMALTLLREMPSVGLPIKAQSYTVAIKACGDAGEGKPAVALLREMQAELSVPP 564

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + ++Y A +   GK  ++ +   +  +M +  VSPN  TY+  I      G ++EA+ + 
Sbjct: 565 NVISYTAAIAACGKGDQWKQALELLREMASMGVSPNDRTYTAAITACGNSGKWEEALSLL 624

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           RE    G   ++  Y+A I A    G  E AV L  E+   GI  +V  YN+ + A G S
Sbjct: 625 REMPTMGADPNIASYTATIKACGNGGQWERAVELFRELPSAGITADVQAYNACVQACGNS 684

Query: 558 ATTECTVD 565
              +  V+
Sbjct: 685 GAVDQAVE 692



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/453 (24%), Positives = 200/453 (44%), Gaps = 36/453 (7%)

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
           D +  N++L   +  G W+    +  +M   G+  D  TY   + A  KG +   +  ++
Sbjct: 213 DTVMCNAVLNTFAADGRWQVVLEVMRQMREAGLTPDALTYTNAIKACGKGREWRRSVALL 272

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
            EM A  +  N + Y   +     +G   +A+ +  EM+  GI  + + YNT ++     
Sbjct: 273 KEMSAHGVELNSIHYVCAMTACKISGMGAEAVGLLREMQAAGIEPNVICYNTAIAACGTG 332

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G+ E A+ + +EM + G+R +  T  A +   G + + ++   +   M    V+     Y
Sbjct: 333 GQSEVAVDLLEEMNALGVRPNTQTCLAAVRAAGDRDRGEQAVSVLRSMSEAGVAAEAKCY 392

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           +  I    +G  +  A+++ RE ++ G++  V+ Y A I A       E AV+LL EM  
Sbjct: 393 AVTIKACGRGRRWARALELLREMEKNGVEPIVMGYDACIAACGDGKQWEQAVALLREMPT 452

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG-- 595
            G+ P VV+Y+  I A G+S   +  + ++ R++  Q+   N DA+C  +       G  
Sbjct: 453 VGVTPTVVSYSHAIAACGQSYQWKPAL-ELLREM-PQEAGINPDAVCYNNCMTALGRGLQ 510

Query: 596 --------RTDNQI---IKVFGQLVAEK----AGQGKKENRCRQEILCILGVFQKMH-KL 639
                   R    +   IK     VA K    AG+GK            + + ++M  +L
Sbjct: 511 WEMALTLLREMPSVGLPIKAQSYTVAIKACGDAGEGKP----------AVALLREMQAEL 560

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYGVAHGLLMGYRDNIWV 695
            + PNV++++A + AC + + ++ A  LL E+       +++ Y  A  +        W 
Sbjct: 561 SVPPNVISYTAAIAACGKGDQWKQALELLREMASMGVSPNDRTYTAA--ITACGNSGKWE 618

Query: 696 QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           +ALSL  E+  M +    A Y A      + GQ
Sbjct: 619 EALSLLREMPTMGADPNIASYTATIKACGNGGQ 651



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 5/262 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           ++  ++A GR    + A+++   M    L     +Y   I ACG  G + K  V +  +M
Sbjct: 498 YNNCMTALGRGLQWEMALTLLREMPSVGLPIKAQSYTVAIKACGDAG-EGKPAVALLREM 556

Query: 291 LRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
                V P+ I++ + +A C +G  W+ A  L  EM   G+  +  TY   + A     +
Sbjct: 557 QAELSVPPNVISYTAAIAACGKGDQWKQALELLREMASMGVSPNDRTYTAAITACGNSGK 616

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            + A  ++ EMP     PN+ +Y+  I      G+ + A+ +F E+   GI  D  +YN 
Sbjct: 617 WEEALSLLREMPTMGADPNIASYTATIKACGNGGQWERAVELFRELPSAGITADVQAYNA 676

Query: 410 VLSIYAKLGRFEEALLVCKEM-ESSGIRKDAVTYNALLGGYG--KQGKYDEVRRMFEQMK 466
            +      G  ++A+ + +EM  ++G+  +  TYNA L        G++ +   + E+M 
Sbjct: 677 CVQACGNSGAVDQAVELLREMAPAAGLEPNVFTYNAALMACSCPDGGRWGKALELLEEMA 736

Query: 467 ADCVSPNLLTYSTLIDVYSKGG 488
              ++PN +T+ + +    + G
Sbjct: 737 WRGIAPNAVTHESALAACGERG 758


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 245/548 (44%), Gaps = 59/548 (10%)

Query: 200 ISILGRLGKVDL--AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           I + G L K  L   K I    + EG   +   F++LI AY RSG    A  +   M   
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEI----FDDMLRNGVQPDRITFNSLLAVCSRG 312
             +P  V YN +I   CG   +    V+E+    + +ML   V  +++  ++L       
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G +E A ++  EM+ +G   D  TY+ ++  +C  +++D AF +  EM + ++ P+V TY
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +ID + K G L  A   F EM   G   + V+Y  ++  Y K  +   A  + + M S
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC----------------VSPNLLT 476
            G   + VTY AL+ G+ K G+ ++  +++ +M+ +                   PN+ T
Sbjct: 579 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFT 638

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y  L+D   K    KEA  +       G + + ++Y ALID  CK G ++ A  +  +M+
Sbjct: 639 YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMS 698

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE------SANLDAMCSQDDKD 590
           + G  PNV TY+S+ID   +    +  +  + R L           +  +D +C     D
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 591 --------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
                   ++E G   N +       + +  G+  K ++C       L + ++M      
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYT---AMIDGFGKAGKVDKC-------LELMRQMGAKGCA 808

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNI------WVQ 696
           PN VT+  ++N C      +DA  LL+E++    Q Y   H  + GYR  I      ++ 
Sbjct: 809 PNFVTYRVLINHCCAAGLLDDAHQLLDEMK----QTYWPKH--MAGYRKVIEGFNREFII 862

Query: 697 ALSLFDEV 704
           +L L DE+
Sbjct: 863 SLGLLDEI 870



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 184/378 (48%), Gaps = 21/378 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I +L    KVD A  +FE   +      V+ ++ LI ++ + G  Q+A   F+ M R
Sbjct: 484 SKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVR 543

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               PN+VTY A+I A  K         E+F+ ML  G  P+ +T+ +L+    + G  E
Sbjct: 544 DGCAPNVVTYTALIHAYLKAR-KMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602

Query: 317 AARNLFNEMVHRG------------------IDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
            A  ++  M  RG                   D +IFTY  L+D +CK  ++  A +++ 
Sbjct: 603 KACQIYARM--RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
            M  +   PN + Y  +IDG+ K G+LD+A  +F++M   G G +  +Y++++    K  
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           R + AL V   M  +    + + Y  ++ G  K GK DE  R+   M+     PN++TY+
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYT 780

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            +ID + K G   + +++ R+    G   + V Y  LI+  C  GL++ A  LLDEM + 
Sbjct: 781 AMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQT 840

Query: 539 GIRPNVVTYNSIIDAFGR 556
               ++  Y  +I+ F R
Sbjct: 841 YWPKHMAGYRKVIEGFNR 858



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 180/385 (46%), Gaps = 19/385 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    ++G +  A+  F+  + +G    V  ++ALI AY ++     A  +F  M  
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDR----------------I 300
               PN+VTY A+ID   K G   +   +I+  M  N   PD                  
Sbjct: 579 EGCIPNVVTYTALIDGHCKSG-QIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           T+ +L+    +    + AR+L + M   G + +   Y+ L+D  CK  ++D A  +  +M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
             +   PNV TYS++ID   K  RLD AL + S M       + + Y  ++    K+G+ 
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           +EA  +   ME  G   + VTY A++ G+GK GK D+   +  QM A   +PN +TY  L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I+     GL  +A Q+  E KQ      +  Y  +I+   +  ++  ++ LLDE+ +   
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVA 875

Query: 541 RPNVVTYNSIIDAFGRSATTECTVD 565
            P +  Y  +ID+F ++   E  ++
Sbjct: 876 VPIIPAYRILIDSFCKAGRLELALE 900



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 136/583 (23%), Positives = 257/583 (44%), Gaps = 45/583 (7%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS-----AMISILGRLGKVDLAKNIF 216
           L+R+    G W+ A++          R  D G   S     A++ +     ++D A  + 
Sbjct: 203 LIRKCCRNGLWNVALEELG-------RLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVH 255

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
               + G+    Y     +    ++G  +EA+++   +++   K + V Y  +I    + 
Sbjct: 256 REMSDSGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEA 312

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
            + F+  ++    M  +   P+ +T+  LL  C R       + + + M+  G       
Sbjct: 313 SL-FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRI 371

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD--DALNM--- 391
           +N+L+ A C+      A++++ +M      P  V Y+ +I G     +L   D L +   
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEK 431

Query: 392 -FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
            + EM    + L++V+ + +       G+FE+A  + +EM S G   D  TY+ ++G   
Sbjct: 432 AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
              K D    +FE+MK++ V P++ TY+ LID + K GL ++A + F E  + G   +VV
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y+ALI A  K   + SA  L + M  EG  PNVVTY ++ID   +S   E       R 
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK-KENRCRQEILCI 629
            G   +  ++D     DD ++++        I  +G LV       K KE R   +++ +
Sbjct: 612 RG-NADIPDVDMYFKIDDGNIRDPN------IFTYGALVDGLCKAHKVKEARDLLDVMSV 664

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL--RLFDNQVYGVAHGLLM 687
            G          +PN + + A+++   +    ++A M+  ++  R +   VY  +  +  
Sbjct: 665 EGC---------EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 688 GYRDNIWVQALSLFDEVKLMDSSTAS--AFYNALTDMLWHFGQ 728
            ++D     AL +    +++++S A     Y  + D L   G+
Sbjct: 716 LFKDKRLDLALKVLS--RMLENSCAPNVIIYTEMIDGLCKVGK 756



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 193/417 (46%), Gaps = 52/417 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I    +  K+  A  +FE  L+EG    V  ++ALI  + +SG  ++A  ++  M+ 
Sbjct: 554 TALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613

Query: 257 Y---------------NLK-PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
                           N++ PN+ TY A++D   K     K   ++ D M   G +P+ I
Sbjct: 614 NADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAH-KVKEARDLLDVMSVEGCEPNHI 672

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
            +++L+    + G  + A+ +F +M  RG   +++TY++L+D + K  ++DLA ++++ M
Sbjct: 673 VYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM 732

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
              + +PNV+ Y+ MIDG  K G+ D+A  + S M+  G   + V+Y  ++  + K G+ 
Sbjct: 733 LENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKV 792

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA------------- 467
           ++ L + ++M + G   + VTY  L+      G  D+  ++ ++MK              
Sbjct: 793 DKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKV 852

Query: 468 --------------------DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL-- 505
                               +   P +  Y  LID + K G  + A+++ +         
Sbjct: 853 IEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYS 912

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
            AD  LYS+LI++L     V+ A  L  +M K G  P +  +  ++    R   T C
Sbjct: 913 AADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRTLC 969



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 167/404 (41%), Gaps = 47/404 (11%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G +  A++ +LG  G   + +       +E         + LI    R+G    A+    
Sbjct: 162 GPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELG 221

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
            +K    KP+ +TYNA++    +   +D  ++V    +M  +G   D  T    + +  +
Sbjct: 222 RLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVH--REMSDSGFNMDGYTLGCFVHLLCK 279

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            G W  A  L  +        D   Y  ++  +C+ +  + A + ++ M + +  PNVVT
Sbjct: 280 AGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVT 336

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y  ++ G  +  +L     + S M   G    R  +N+++  Y + G +  A  + K+M 
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396

Query: 432 SSGIRKDAVTYNALLGG-------------------YGKQ-------------------- 452
             G +   V YN L+GG                   YG+                     
Sbjct: 397 DCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLC 456

Query: 453 --GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
             GK+++   +  +M +    P+  TYS +I +         A  +F E K   +  DV 
Sbjct: 457 GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVF 516

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            Y+ LID+ CK GL++ A    DEM ++G  PNVVTY ++I A+
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAY 560


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 188/354 (53%), Gaps = 10/354 (2%)

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQ 296
            Y + G  +EA+ V   ++ +NL PN+  +N+ I      G   K   ++F DM   G+ 
Sbjct: 300 GYCKVGKSEEAMDV---LEVFNLSPNIFVFNSFISKLCTDGNMLK-AAKVFQDMCEMGLI 355

Query: 297 PDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           PD  ++ +++A  C    +  A + L  +M+ RGI   + TY  L+D+ CK   M++A  
Sbjct: 356 PDCFSYTTMMAGYCKVKDISNALKYL-GKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEY 414

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           +   M  + + P+VV+Y+T+++GY K G L  A  + S M+  G+  D V+YN ++    
Sbjct: 415 LFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLI 474

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K G   EA  +  E+   G   D VT+  ++GG+  +G ++E   +F  M    + P+++
Sbjct: 475 KRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVV 534

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           T S L++ Y +     EA  +F +   AGLKADV+LY++LI   C  G ++ A  L+  M
Sbjct: 535 TCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMM 594

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            + GI PN +T+++++  + +    +C  + VER   K ++      + ++DD+
Sbjct: 595 IEHGIMPNNITHHALVLGYEK----KCVENPVERAAFKLQQLLLKYGIQAEDDR 644



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 184/380 (48%), Gaps = 35/380 (9%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           +++LA +  +   ++G G      S  IS Y   G       +   MK   +KP++V Y 
Sbjct: 201 QLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYT 260

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGV-------------------------------- 295
            VID+  K  +  K    I   M + GV                                
Sbjct: 261 IVIDSLCKMSL-LKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFNL 319

Query: 296 QPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAF 354
            P+   FNS ++ +C+ G + +AA+ +F +M   G+  D F+Y T++   CK   +  A 
Sbjct: 320 SPNIFVFNSFISKLCTDGNMLKAAK-VFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNAL 378

Query: 355 EIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIY 414
           + + +M  + I P+V TY+ +ID   K G ++ A  +F  M   G+  D VSYNT+++ Y
Sbjct: 379 KYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGY 438

Query: 415 AKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
            K G  ++A  +   M S+G+  D VTYN L+ G  K+G  +E + + +++     SP++
Sbjct: 439 GKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDV 498

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           +T++ +I  +S  G ++EA  +F    +  L+ DVV  SAL++  C+   +  A  L  +
Sbjct: 499 VTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHK 558

Query: 535 MTKEGIRPNVVTYNSIIDAF 554
           M   G++ +V+ YNS+I  F
Sbjct: 559 MLDAGLKADVILYNSLIHGF 578



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 147/290 (50%), Gaps = 1/290 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++ IS L   G +  A  +F+     G     ++++ +++ Y +      A+     M +
Sbjct: 327 NSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLK 386

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P++ TY  +ID+C K G + +    +F  M+  G+ PD +++N+L+    + G  +
Sbjct: 387 RGIRPSVATYTLLIDSCCKPG-NMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQ 445

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L + M   G+  D+ TYN L+  + K   ++ A +I+ E+  +  SP+VVT++ +I
Sbjct: 446 KAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNII 505

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G++  G  ++A  +F  M    +  D V+ + +L+ Y +     EA ++  +M  +G++
Sbjct: 506 GGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLK 565

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            D + YN+L+ G+   G  D+   +   M    + PN +T+  L+  Y K
Sbjct: 566 ADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGYEK 615



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 126/246 (51%), Gaps = 3/246 (1%)

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  L  +M H  I   I   N+LL A+ +  Q++LA++ + EM ++ +  N    S  
Sbjct: 168 QVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLF 227

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I GY   G +D    +  EMK+LGI  D V+Y  V+    K+   +EA  +  +M   G+
Sbjct: 228 ISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGV 287

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D+V+ ++++ GY K GK +E   + E      +SPN+  +++ I      G   +A +
Sbjct: 288 FLDSVSVSSVVDGYCKVGKSEEAMDVLEVFN---LSPNIFVFNSFISKLCTDGNMLKAAK 344

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F++  + GL  D   Y+ ++   CK   + +A+  L +M K GIRP+V TY  +ID+  
Sbjct: 345 VFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCC 404

Query: 556 RSATTE 561
           +    E
Sbjct: 405 KPGNME 410



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 175/381 (45%), Gaps = 23/381 (6%)

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           NSLL           A +   EM  +G+  +    +  +   C    +D  ++++ EM  
Sbjct: 190 NSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKY 249

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
             I P+VV Y+ +ID   K   L +A ++  +M  +G+ LD VS ++V+  Y K+G+ EE
Sbjct: 250 LGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEE 309

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A+ V   +E   +  +   +N+ +      G   +  ++F+ M    + P+  +Y+T++ 
Sbjct: 310 AMDV---LEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMA 366

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            Y K      A++   +  + G++  V  Y+ LID+ CK G +E A  L   M  EG+ P
Sbjct: 367 GYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVP 426

Query: 543 NVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESANLDAMCS--------QDDKDVQ 592
           +VV+YN++++ +G+    +   +   + R  G   +    + +           + KD+ 
Sbjct: 427 DVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDIL 486

Query: 593 E--AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
           +    R  +  +  F  ++   + +G  E            +F  M +  ++P+VVT SA
Sbjct: 487 DELTRRGFSPDVVTFTNIIGGFSNKGNFEEA--------FLLFFYMSEHHLEPDVVTCSA 538

Query: 651 ILNACSRCNSFEDASMLLEEL 671
           +LN   R     +A++L  ++
Sbjct: 539 LLNGYCRTRCMAEANVLFHKM 559



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 129/270 (47%), Gaps = 9/270 (3%)

Query: 407 YNTVLSIYAKLGRFEEAL-LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           Y  +++ Y K    + AL L+CK M    I       N+LL    +  + +      ++M
Sbjct: 154 YGMLVNCYVKENMTQVALKLICK-MRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM 212

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           K+  +  N    S  I  Y   G      ++  E K  G+K DVV Y+ +ID+LCK  L+
Sbjct: 213 KSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLL 272

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER-DLGKQKESAN--LDA 582
           + A S+L +MT+ G+  + V+ +S++D + +   +E  +D +E  +L       N  +  
Sbjct: 273 KEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISK 332

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKI 641
           +C+  D ++ +A +    + ++ G +    +        C+ ++I   L    KM K  I
Sbjct: 333 LCT--DGNMLKAAKVFQDMCEM-GLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGI 389

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +P+V T++ ++++C +  + E A  L + +
Sbjct: 390 RPSVATYTLLIDSCCKPGNMEMAEYLFQRM 419



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 92/185 (49%), Gaps = 7/185 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+   G +G   KA +    ++ R    +      + +I  L + G V+ AK+I + 
Sbjct: 431 YNTLMNGYGKKGHLQKAFE--LLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDE 488

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
               G+   V  F+ +I  +   G  +EA  +F  M  ++L+P++VT +A+++  C    
Sbjct: 489 LTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRC 548

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           +   +V  +F  ML  G++ D I +NSL+   CS G + +A  +L + M+  GI  +  T
Sbjct: 549 MAEANV--LFHKMLDAGLKADVILYNSLIHGFCSLGNIDDAC-HLVSMMIEHGIMPNNIT 605

Query: 337 YNTLL 341
           ++ L+
Sbjct: 606 HHALV 610


>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
          Length = 847

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 173/325 (53%), Gaps = 1/325 (0%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +A+ V+ +M  + +KP +VTYN ++D+  KGG   +  +++  +M R G  P+ +T+N L
Sbjct: 523 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGG-KVQQGLDLLSEMQRRGCAPNDVTYNVL 581

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +   S+ G +E A+ L  EM+  G+    +TYN L+        +  A  +  EM  K  
Sbjct: 582 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGA 641

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           SP V TY++ I G  K GR+ DA+   S+M    +  D VSYNT++  Y +LG   +A L
Sbjct: 642 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFL 701

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           +  E+ S  +    VTYN LL G  +QG+ +  +++  +M  + ++P+++TY+ L++   
Sbjct: 702 LFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSC 761

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G    A + F E    GL+ D   Y+  I    K G    A SL +EM  +G  P+++
Sbjct: 762 KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLI 821

Query: 546 TYNSIIDAFGRSATTECTVDDVERD 570
            YN ++D   +    E   + +++D
Sbjct: 822 IYNVVVDGLCKLGNLEEASELLQKD 846



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 166/323 (51%), Gaps = 1/323 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  ++ T    G   T+  ++ L+ +Y + G  Q+ + + + M+R    PN VTYN +I+
Sbjct: 524 AVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 583

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              K G +F+    +  +ML+ G++    T+N L+      GL   A +L  EMV +G  
Sbjct: 584 GLSKKG-EFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGAS 642

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
             + TYN+ +  +CK  +M  A + +++M A N+ P+VV+Y+T+I GY + G L  A  +
Sbjct: 643 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 702

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F E++ + +    V+YNT+L    + G  E A  +  EM + GI  D VTY  L+ G  K
Sbjct: 703 FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCK 762

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G     +  F++M  + +  +   Y+T I    K G    A  +  E    G   D+++
Sbjct: 763 MGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLII 822

Query: 512 YSALIDALCKNGLVESAVSLLDE 534
           Y+ ++D LCK G +E A  LL +
Sbjct: 823 YNVVVDGLCKLGNLEEASELLQK 845



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 145/273 (53%)

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           +  + +FD M+++ + PD    N +L +     L   A  ++  M   GI   I TYNTL
Sbjct: 487 EQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTL 546

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           LD+ CKG ++    ++++EM  +  +PN VTY+ +I+G +K G  + A  +  EM   G+
Sbjct: 547 LDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGL 606

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
            +   +YN ++  Y   G   EAL + +EM   G      TYN+ + G  K G+  +  +
Sbjct: 607 KVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQ 666

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
               M A+ + P++++Y+TLI  Y + G   +A  +F E +   L   +V Y+ L+D LC
Sbjct: 667 QLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLC 726

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           + G +E A  L  EM  EGI P++VTY  +++ 
Sbjct: 727 RQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 759



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 134/301 (44%), Gaps = 39/301 (12%)

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           + L+  Y K+   ++   +F++M    +SP++   + ++ +     L  +A++++R   +
Sbjct: 474 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 533

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
            G+K  +V Y+ L+D+ CK G V+  + LL EM + G  PN VTYN +I+   +    E 
Sbjct: 534 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFE- 592

Query: 563 TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ--LVAEKAGQGKKEN 620
                +  +G+  ++             ++ +  T N +I  +    L+AE         
Sbjct: 593 ---QAKGLIGEMLKTG------------LKVSAYTYNPLIYGYFNKGLLAEALS------ 631

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG 680
              QE + + G           P V T+++ +    +     DA   L ++ L +N +  
Sbjct: 632 --LQEEMVLKGA---------SPTVATYNSFIYGLCKLGRMSDAMQQLSDM-LANNLLPD 679

Query: 681 VA--HGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVL 737
           V   + L+ GY R    ++A  LFDE++ +        YN L D L   G+   AQ + +
Sbjct: 680 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKV 739

Query: 738 E 738
           E
Sbjct: 740 E 740


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 245/548 (44%), Gaps = 59/548 (10%)

Query: 200 ISILGRLGKVDL--AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           I + G L K  L   K I    + EG   +   F++LI AY RSG    A  +   M   
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEI----FDDMLRNGVQPDRITFNSLLAVCSRG 312
             +P  V YN +I   CG   +    V+E+    + +ML   V  +++  ++L       
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G +E A ++  EM+ +G   D  TY+ ++  +C  +++D AF +  EM + ++ P+V TY
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +ID + K G L  A   F EM   G   + V+Y  ++  Y K  +   A  + + M S
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC----------------VSPNLLT 476
            G   + VTY AL+ G+ K G+ ++  +++ +M+ +                   PN+ T
Sbjct: 579 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFT 638

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y  L+D   K    KEA  +       G + + ++Y ALID  CK G ++ A  +  +M+
Sbjct: 639 YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMS 698

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE------SANLDAMCSQDDKD 590
           + G  PNV TY+S+ID   +    +  +  + R L           +  +D +C     D
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 591 --------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
                   ++E G   N +       + +  G+  K ++C       L + ++M      
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYT---AMIDGFGKAGKVDKC-------LELMRQMGAKGCA 808

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNI------WVQ 696
           PN VT+  ++N C      +DA  LL+E++    Q Y   H  + GYR  I      ++ 
Sbjct: 809 PNFVTYRVLINHCCAAGLLDDAHQLLDEMK----QTYWPKH--MAGYRKVIEGFNREFII 862

Query: 697 ALSLFDEV 704
           +L L DE+
Sbjct: 863 SLGLLDEI 870



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 184/378 (48%), Gaps = 21/378 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I +L    KVD A  +FE   +      V+ ++ LI ++ + G  Q+A   F+ M R
Sbjct: 484 SKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVR 543

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               PN+VTY A+I A  K         E+F+ ML  G  P+ +T+ +L+    + G  E
Sbjct: 544 DGCAPNVVTYTALIHAYLKAR-KMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602

Query: 317 AARNLFNEMVHRG------------------IDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
            A  ++  M  RG                   D +IFTY  L+D +CK  ++  A +++ 
Sbjct: 603 KACQIYARM--RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
            M  +   PN + Y  +IDG+ K G+LD+A  +F++M   G G +  +Y++++    K  
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           R + AL V   M  +    + + Y  ++ G  K GK DE  R+   M+     PN++TY+
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYT 780

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            +ID + K G   + +++ R+    G   + V Y  LI+  C  GL++ A  LLDEM + 
Sbjct: 781 AMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQT 840

Query: 539 GIRPNVVTYNSIIDAFGR 556
               ++  Y  +I+ F R
Sbjct: 841 YWPKHMAGYRKVIEGFNR 858



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 180/385 (46%), Gaps = 19/385 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    ++G +  A+  F+  + +G    V  ++ALI AY ++     A  +F  M  
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDR----------------I 300
               PN+VTY A+ID   K G   +   +I+  M  N   PD                  
Sbjct: 579 EGCIPNVVTYTALIDGHCKSG-QIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           T+ +L+    +    + AR+L + M   G + +   Y+ L+D  CK  ++D A  +  +M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
             +   PNV TYS++ID   K  RLD AL + S M       + + Y  ++    K+G+ 
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           +EA  +   ME  G   + VTY A++ G+GK GK D+   +  QM A   +PN +TY  L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I+     GL  +A Q+  E KQ      +  Y  +I+   +  ++  ++ LLDE+ +   
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVA 875

Query: 541 RPNVVTYNSIIDAFGRSATTECTVD 565
            P +  Y  +ID+F ++   E  ++
Sbjct: 876 VPIIPAYRILIDSFCKAGRLELALE 900



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 136/583 (23%), Positives = 257/583 (44%), Gaps = 45/583 (7%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS-----AMISILGRLGKVDLAKNIF 216
           L+R+    G W+ A++          R  D G   S     A++ +     ++D A  + 
Sbjct: 203 LIRKCCRNGLWNVALEELG-------RLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVH 255

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
               + G+    Y     +    ++G  +EA+++   +++   K + V Y  +I    + 
Sbjct: 256 REMSDSGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEA 312

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
            + F+  ++    M  +   P+ +T+  LL  C R       + + + M+  G       
Sbjct: 313 SL-FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRI 371

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD--DALNM--- 391
           +N+L+ A C+      A++++ +M      P  V Y+ +I G     +L   D L +   
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEK 431

Query: 392 -FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
            + EM    + L++V+ + +       G+FE+A  + +EM S G   D  TY+ ++G   
Sbjct: 432 AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
              K D    +FE+MK++ V P++ TY+ LID + K GL ++A + F E  + G   +VV
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y+ALI A  K   + SA  L + M  EG  PNVVTY ++ID   +S   E       R 
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK-KENRCRQEILCI 629
            G   +  ++D     DD ++++        I  +G LV       K KE R   +++ +
Sbjct: 612 RG-NADIPDVDMYFKIDDGNIRDPN------IFTYGALVDGLCKAHKVKEARDLLDVMSV 664

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL--RLFDNQVYGVAHGLLM 687
            G          +PN + + A+++   +    ++A M+  ++  R +   VY  +  +  
Sbjct: 665 EGC---------EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 688 GYRDNIWVQALSLFDEVKLMDSSTAS--AFYNALTDMLWHFGQ 728
            ++D     AL +    +++++S A     Y  + D L   G+
Sbjct: 716 LFKDKRLDLALKVLS--RMLENSCAPNVIIYTEMIDGLCKVGK 756



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 192/411 (46%), Gaps = 52/411 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I    +  K+  A  +FE  L+EG    V  ++ALI  + +SG  ++A  ++  M+ 
Sbjct: 554 TALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613

Query: 257 Y---------------NLK-PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
                           N++ PN+ TY A++D   K     K   ++ D M   G +P+ I
Sbjct: 614 NADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAH-KVKEARDLLDVMSVEGCEPNHI 672

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
            +++L+    + G  + A+ +F +M  RG   +++TY++L+D + K  ++DLA ++++ M
Sbjct: 673 VYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM 732

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
              + +PNV+ Y+ MIDG  K G+ D+A  + S M+  G   + V+Y  ++  + K G+ 
Sbjct: 733 LENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKV 792

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA------------- 467
           ++ L + ++M + G   + VTY  L+      G  D+  ++ ++MK              
Sbjct: 793 DKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKV 852

Query: 468 --------------------DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL-- 505
                               +   P +  Y  LID + K G  + A+++ +E        
Sbjct: 853 IEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYS 912

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            AD  LYS+LI++L     V+ A  L  +M K G  P +  +  ++    R
Sbjct: 913 AADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIR 963



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 167/404 (41%), Gaps = 47/404 (11%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G +  A++ +LG  G   + +       +E         + LI    R+G    A+    
Sbjct: 162 GPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELG 221

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
            +K    KP+ +TYNA++    +   +D  ++V    +M  +G   D  T    + +  +
Sbjct: 222 RLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVH--REMSDSGFNMDGYTLGCFVHLLCK 279

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            G W  A  L  +        D   Y  ++  +C+ +  + A + ++ M + +  PNVVT
Sbjct: 280 AGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVT 336

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y  ++ G  +  +L     + S M   G    R  +N+++  Y + G +  A  + K+M 
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396

Query: 432 SSGIRKDAVTYNALLGG-------------------YGKQ-------------------- 452
             G +   V YN L+GG                   YG+                     
Sbjct: 397 DCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLC 456

Query: 453 --GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
             GK+++   +  +M +    P+  TYS +I +         A  +F E K   +  DV 
Sbjct: 457 GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVF 516

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            Y+ LID+ CK GL++ A    DEM ++G  PNVVTY ++I A+
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAY 560



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 127/283 (44%), Gaps = 10/283 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++I  L +  ++DLA  +    L       V  ++ +I    + G   EA  + + M+ 
Sbjct: 710 SSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               PN+VTY A+ID  GK G      +E+   M   G  P+ +T+  L+  C   GL +
Sbjct: 770 KGCHPNVVTYTAMIDGFGKAG-KVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLD 828

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L +EM      + +  Y  +++   +  +  ++  ++ E+      P +  Y  +I
Sbjct: 829 DAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--EFIISLGLLDEIAENVAVPIIPAYRILI 886

Query: 377 DGYAKAGRLDDALNMFSEMKFLG--IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           D + KAGRL+ AL +  EM         D+  Y++++   +   + ++A  +  +M   G
Sbjct: 887 DSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRG 946

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
              +   +  L+ G  +  +++E  ++     +DC+   ++ +
Sbjct: 947 GIPELSIFFYLVKGLIRINRWEEALQL-----SDCICQMMVDF 984


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 226/473 (47%), Gaps = 14/473 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+V  A ++F+  +++G   T   +  LI      G   E   +   M    L  +   +
Sbjct: 305 GEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEF 364

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEM 325
           N VI    +    +K  + + + ++  GV PD  T+  L+  +C    L EA  NL+++M
Sbjct: 365 NLVIKGLLRDK-RWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAV-NLWDKM 421

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              G+   I TY++LL   C+  +MD A ++ +EMP K   PN VTY+T++ GY K    
Sbjct: 422 KEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAF 481

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D+A  + +EM+  G+     +YN +++    + R  E   + K   S G     +TYN++
Sbjct: 482 DNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSI 541

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G+ K G       M+ QM+   ++PN++TY++ ID Y +      A+++    ++ G+
Sbjct: 542 INGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGI 601

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           + D+  Y+A ID  CK G +  A+  L  + K+G+ P+V  YNS +  + ++        
Sbjct: 602 QPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGY-KNLKMMAEAS 660

Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
                + KQ+  A+ +   +  D    + G      ++++ +++A       K       
Sbjct: 661 KFYYSMIKQRVVADTEIYTTLIDG-FSKVGNVAFA-LELYSEMMANHVIPDDKTFTALTH 718

Query: 626 ILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            LC  G       +   M +L + PN+VT++ ++NAC R    ++A  L +E+
Sbjct: 719 GLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEM 771



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 189/454 (41%), Gaps = 77/454 (16%)

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G      + +FD+M   G   D   ++ ++  C RGG+   A  LF+EM   G+  D   
Sbjct: 163 GASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERV 222

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y   +  +CK    D A +++ +M      P  +TYS+++D   K GR+D+AL +  +M 
Sbjct: 223 YAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQML 282

Query: 397 F-LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
              G  +D V    ++  Y   G   +AL +  E+ S G+    VTY  L+ G   +G  
Sbjct: 283 LATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMS 342

Query: 456 DEV----RRMFEQ------------------------------MKADCVSPNLLTYSTLI 481
           DE     R+M EQ                              +  D   P++ TY  LI
Sbjct: 343 DETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGVPDVFTYGCLI 402

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
               K     EA+ ++ + K+AG+K  +V Y +L+   C+ G ++ A+ L  EM  +G  
Sbjct: 403 HWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFP 462

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA----------------NLDAMCS 585
           PN VTY +++  + +        D+    L + +++                  ++ +C 
Sbjct: 463 PNEVTYTTLMKGYIKKK----AFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCE 518

Query: 586 QDD-------KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
            D+       +       T N II  F      KAG                G++++M K
Sbjct: 519 VDEMLKRFLSEGFVPTTMTYNSIINGF-----VKAGMMGSA----------FGMYRQMRK 563

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             I PN+VT+++ ++   R N  + A  LL  +R
Sbjct: 564 KGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVR 597



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 163/346 (47%), Gaps = 9/346 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++D A  ++    ++G+      ++ L+  Y +      A ++ N M++  +     TY
Sbjct: 444 GRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTY 503

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLR----NGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           N +I+    G      V E+ D+ML+     G  P  +T+NS++    + G+  +A  ++
Sbjct: 504 NILIN----GLYMVNRVCEV-DEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMY 558

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            +M  +GI  +I TY + +D  C+    DLA +++  +    I P++  Y+  ID + K 
Sbjct: 559 RQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQ 618

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G +  AL+    +   G+  D   YN+ ++ Y  L    EA      M    +  D   Y
Sbjct: 619 GNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIY 678

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             L+ G+ K G       ++ +M A+ V P+  T++ L     + G    A ++  + ++
Sbjct: 679 TTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRR 738

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
             +  ++V Y+ LI+A  ++G ++ A  L DEM   G+ P+  TY+
Sbjct: 739 LDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYD 784



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 145/316 (45%), Gaps = 16/316 (5%)

Query: 211 LAKNIFETA---LNEGYGNTV----YAFSALISA-YGRSGYCQEAISVFNSMKRY---NL 259
           + K  F+ A   LNE   N V    Y ++ LI+  Y  +  C+    V   +KR+     
Sbjct: 476 IKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCE----VDEMLKRFLSEGF 531

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
            P  +TYN++I+   K G+       ++  M + G+ P+ +T+ S +    R    + A 
Sbjct: 532 VPTTMTYNSIINGFVKAGM-MGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAV 590

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            L   +   GI  DI  YN  +D  CK   M  A   +  +    ++P+V  Y++ + GY
Sbjct: 591 KLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGY 650

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
                + +A   +  M    +  D   Y T++  ++K+G    AL +  EM ++ +  D 
Sbjct: 651 KNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDD 710

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
            T+ AL  G  + G  D  +R+ + M+   VSPN++TY+ LI+   + G  +EA Q+  E
Sbjct: 711 KTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDE 770

Query: 500 FKQAGLKADVVLYSAL 515
              +G+  D   Y  L
Sbjct: 771 MLSSGVVPDDTTYDIL 786



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 140/305 (45%), Gaps = 41/305 (13%)

Query: 180 AFAVKREERKNDQG---KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALIS 236
           A+A+  E R+N         + +I+ L  + +V     + +  L+EG+  T   ++++I+
Sbjct: 484 AYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIIN 543

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGV 295
            + ++G    A  ++  M++  + PN+VTY + ID  C     D    V++   + R+G+
Sbjct: 544 GFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDL--AVKLLIYVRRDGI 601

Query: 296 QPDRITFNSLL-AVCSRGGLWEA----------------------------------ARN 320
           QPD   +N+ +   C +G +  A                                  A  
Sbjct: 602 QPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASK 661

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
            +  M+ + +  D   Y TL+D   K   +  A E+ +EM A ++ P+  T++ +  G  
Sbjct: 662 FYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLC 721

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           ++G +D A  +  +M+ L +  + V+YN +++   + G+ +EA  +  EM SSG+  D  
Sbjct: 722 RSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDT 781

Query: 441 TYNAL 445
           TY+ L
Sbjct: 782 TYDIL 786



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 63/126 (50%)

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            M + G+  DA +   LL    +     +   +F++M+      +   Y  +I    +GG
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGG 199

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
           ++ +A+++F E   AG+K D  +Y+  I  LCK    + A+ +L +M + G  P  +TY+
Sbjct: 200 MHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYS 259

Query: 549 SIIDAF 554
           S++D  
Sbjct: 260 SVVDVL 265


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 230/511 (45%), Gaps = 42/511 (8%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V +++ +I+ +   G   +A ++F  M    ++PN+VTY  VID   K  V       +F
Sbjct: 203 VVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQV-VDRAEGVF 261

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
             M+  GV+PD  T+N L+      G W+    +  EM   G+  D +TY +LL+ +C  
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +   A      M  K I PNV  Y  +I GYA  G L +  ++ + M   G+  D   +
Sbjct: 322 GRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N + + YAK    +EA+ +  +M+  G+  D V + AL+    K G+ D+    F QM  
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
           + V+PN+  +++L+        +++A + + E    G++ DVV ++ ++  LC  G V  
Sbjct: 442 EGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMK 501

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA-NLDAMCSQ 586
           A  L+D M + G RP+V++Y ++I          C V       G+  E+A +LD M S 
Sbjct: 502 AQRLIDLMERVGTRPDVISYTTLIGG-------HCLV-------GRIDEAAKSLDVMLSV 547

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
             K  +            +  L+      G+ ++          GVF++M +  I P VV
Sbjct: 548 GLKPDEWT----------YNTLLHGYCRAGRIDDA--------YGVFREMLRNGITPGVV 589

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQ----VYGVAHGLLMGYRDNIWV-QALSLF 701
           T+S IL+       F +A  L   +     Q    +Y +   +L G   N  V +A  LF
Sbjct: 590 TYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI---ILNGLSKNNCVDEAFKLF 646

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
             +   D       +N +   L+  G+   A
Sbjct: 647 QSLCSKDFQLEITTFNIMIGALFKSGRNEDA 677



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 198/396 (50%), Gaps = 11/396 (2%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK- 213
           D YT+  LL  L N G   +A     F      RK  +  +A   I I G   K  L++ 
Sbjct: 307 DCYTYGSLLNYLCNNGRCREA----RFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEM 362

Query: 214 -NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
            ++    +  G     + F+ + +AY +     EA+ +FN MK+  L P++V + A+IDA
Sbjct: 363 HDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDA 422

Query: 273 -CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            C  G VD    V  F+ M+  GV P+   FNSL+        WE A+  + EM+++GI 
Sbjct: 423 LCKLGRVD--DAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIR 480

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            D+  +NT+L  +C   Q+  A  ++  M      P+V++Y+T+I G+   GR+D+A   
Sbjct: 481 PDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKS 540

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
              M  +G+  D  +YNT+L  Y + GR ++A  V +EM  +GI    VTY+ +L G   
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFT 600

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
             ++ E + ++  M       N+  Y+ +++  SK     EA ++F+       + ++  
Sbjct: 601 TRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT 660

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           ++ +I AL K+G  E A+ L   ++  G+ P+V TY
Sbjct: 661 FNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTY 696



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 182/376 (48%), Gaps = 10/376 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF-NSMK 255
           S +I    R+G+++     F   L  G+       + L+     +   +EA+ +    M 
Sbjct: 98  SILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMP 157

Query: 256 RYNLKPNLVTYNAVIDA-CG-KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
                P++V+YN ++   C  K   +   ++ +  D       P+ +++ +++      G
Sbjct: 158 ELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEG 217

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             + A NLF EM+ RGI  ++ TY T++D +CK   +D A  +  +M  K + P+  TY+
Sbjct: 218 QVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYN 277

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I GY   G+  + + M  EM   G+  D  +Y ++L+     GR  EA      M   
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRK 337

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI+ +   Y  L+ GY  +G   E+  +   M  + +SP+   ++ +   Y+K  +  EA
Sbjct: 338 GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEA 397

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           M IF + KQ GL  DVV + ALIDALCK G V+ AV   ++M  EG+ PN+  +NS++  
Sbjct: 398 MHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457

Query: 554 FGRSATTECTVDDVER 569
                   CTVD  E+
Sbjct: 458 L-------CTVDKWEK 466



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 179/356 (50%), Gaps = 3/356 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L +   VD A+ +F+  +++G       ++ LI  Y   G  +E + +   M  
Sbjct: 242 TTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSA 301

Query: 257 YNLKPNLVTYNAVID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           + LKP+  TY ++++  C  G    +     FD M+R G++P+   +  L+   +  G  
Sbjct: 302 HGLKPDCYTYGSLLNYLCNNGRC--REARFFFDSMIRKGIKPNVAIYGILIHGYATKGAL 359

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
               +L N MV  G+  D   +N +  A  K A +D A  I  +M  + +SP+VV +  +
Sbjct: 360 SEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGAL 419

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           ID   K GR+DDA+  F++M   G+  +   +N+++     + ++E+A     EM + GI
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGI 479

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           R D V +N +L     +G+  + +R+ + M+     P++++Y+TLI  +   G   EA +
Sbjct: 480 RPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAK 539

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
                   GLK D   Y+ L+   C+ G ++ A  +  EM + GI P VVTY++I+
Sbjct: 540 SLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTIL 595



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 174/345 (50%), Gaps = 5/345 (1%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           +D A +IF     +G    V  F ALI A  + G   +A+  FN M    + PN+  +N+
Sbjct: 394 IDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNS 453

Query: 269 VIDACGKGGVD-FKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMV 326
           ++   G   VD ++   E + +ML  G++PD + FN++L  +C++G + +A R L + M 
Sbjct: 454 LV--YGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR-LIDLME 510

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G   D+ +Y TL+   C   ++D A + +  M +  + P+  TY+T++ GY +AGR+D
Sbjct: 511 RVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRID 570

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           DA  +F EM   GI    V+Y+T+L       RF EA  +   M +SG + +   YN +L
Sbjct: 571 DAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIIL 630

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G  K    DE  ++F+ + +      + T++ +I    K G  ++AM +F      GL 
Sbjct: 631 NGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLV 690

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            DV  Y  + + L + G +E    L   M K G  PN    N+++
Sbjct: 691 PDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 199/406 (49%), Gaps = 5/406 (1%)

Query: 157 DDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF 216
           D Y  L+    + G+W + ++     +     K D     S +++ L   G+   A+  F
Sbjct: 274 DTYNCLIHGYLSIGKWKEVVRMLE-EMSAHGLKPDCYTYGS-LLNYLCNNGRCREARFFF 331

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
           ++ + +G    V  +  LI  Y   G   E   + N M    L P+   +N +  A  K 
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            +     + IF+ M + G+ PD + F +L+ A+C  G + +A    FN+M++ G+  +IF
Sbjct: 392 AM-IDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLK-FNQMMNEGVAPNIF 449

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            +N+L+  +C   + + A E   EM  + I P+VV ++T++      G++  A  +   M
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           + +G   D +SY T++  +  +GR +EA      M S G++ D  TYN LL GY + G+ 
Sbjct: 510 ERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI 569

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           D+   +F +M  + ++P ++TYST++        + EA +++     +G + ++ +Y+ +
Sbjct: 570 DDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNII 629

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           ++ L KN  V+ A  L   +  +  +  + T+N +I A  +S   E
Sbjct: 630 LNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNE 675



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 178/361 (49%), Gaps = 5/361 (1%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+I  L +LG+VD A   F   +NEG    ++ F++L+         ++A   +  M   
Sbjct: 418 ALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ 477

Query: 258 NLKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV-CSRGGLW 315
            ++P++V +N ++ + C KG V       + D M R G +PD I++ +L+   C  G + 
Sbjct: 478 GIRPDVVFFNTILCNLCTKGQV--MKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRID 535

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EAA++L + M+  G+  D +TYNTLL   C+  ++D A+ +  EM    I+P VVTYST+
Sbjct: 536 EAAKSL-DVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTI 594

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G     R  +A  ++  M   G   +   YN +L+  +K    +EA  + + + S   
Sbjct: 595 LHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDF 654

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + +  T+N ++G   K G+ ++   +F  + +  + P++ TY  + +   + G  +E   
Sbjct: 655 QLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDD 714

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F   +++G   +  + +AL+  L   G +  A + L ++ ++       T   +I    
Sbjct: 715 LFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLS 774

Query: 556 R 556
           R
Sbjct: 775 R 775



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 119/519 (22%), Positives = 210/519 (40%), Gaps = 96/519 (18%)

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR-------GGLWEAARNLFNEMVHR 328
           G +     +++FD +L +      I FN LL   SR           E   +LFN M+  
Sbjct: 26  GSLGLDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRE 85

Query: 329 ---GIDQDIFTYNTLLDAICKGAQMDLAFE------------------------------ 355
               +  D+ TY+ L+   C+  +++  F                               
Sbjct: 86  CTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRL 145

Query: 356 ------IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA---LNMFSEMKFLGIGLDRVS 406
                 ++  MP    +P+VV+Y+T++ G+    R ++A   L+M ++ +      + VS
Sbjct: 146 REAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVS 205

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y TV++ +   G+ ++A  +  EM   GI+ + VTY  ++ G  K    D    +F+QM 
Sbjct: 206 YATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI 265

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V P+  TY+ LI  Y   G +KE +++  E    GLK D   Y +L++ LC NG   
Sbjct: 266 DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCR 325

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A    D M ++GI+PNV  Y  +I  +                L +  +  NL      
Sbjct: 326 EARFFFDSMIRKGIKPNVAIYGILIHGYATKGA-----------LSEMHDLLNL------ 368

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
               V+     D+ I  +     A+KA   +            + +F KM +  + P+VV
Sbjct: 369 ---MVENGLSPDHHIFNIIFTAYAKKAMIDEA-----------MHIFNKMKQQGLSPDVV 414

Query: 647 TFSAILNACSRCNSFEDASMLLEELR---------LFDNQVYGVAHGLLMGYRDNIWVQA 697
            F A+++A  +    +DA +   ++          +F++ VYG+          + W +A
Sbjct: 415 NFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC-------TVDKWEKA 467

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVV 736
              + E+          F+N +   L   GQ   AQ ++
Sbjct: 468 KEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLI 506



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/327 (20%), Positives = 135/327 (41%), Gaps = 42/327 (12%)

Query: 458 VRRMFEQMKADC---VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
           V  +F +M  +C   V+P+L TYS LI  + + G  +     F    ++G + + ++ + 
Sbjct: 75  VVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQ 134

Query: 515 LIDALCKNGLVESAVS-LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           L+  LC    +  A+  L+  M + G  P+VV+YN+++  F      E  ++ +      
Sbjct: 135 LLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADS 194

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
           Q  S   + +       V     T+ Q+ K +                          +F
Sbjct: 195 QGRSCPPNVVSYA---TVINGFFTEGQVDKAY-------------------------NLF 226

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVYG-VAHGLLMG 688
            +M    I+PNVVT++ +++   +    + A  + +++       DN  Y  + HG L  
Sbjct: 227 LEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSI 286

Query: 689 YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENV 748
            +   W + + + +E+           Y +L + L + G+ R A+       R+ +  NV
Sbjct: 287 GK---WKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNV 343

Query: 749 WSESCLDLHLMSSGAARAMVHAWLLNI 775
                L +H  ++  A + +H  LLN+
Sbjct: 344 AIYGIL-IHGYATKGALSEMHD-LLNL 368


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 203/384 (52%), Gaps = 7/384 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   GE   A+Q       +  R N    + S +I  + +   V+ A +++  
Sbjct: 166 YGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVV--MYSTIIDSMCKDKLVNDAFDLYCE 223

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +++     V  +S+LIS +   G  + A+ +FN M   N+ PN+ T++ +ID  C +G 
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283

Query: 278 V-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           V + K+V+ +   M++  V+ D +T+NSL+           A++LFN M  RG+  D+++
Sbjct: 284 VREAKNVLAV---MMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWS 340

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y+ +++  CK   +D A ++  EM  K I PNVVTY++++DG  K+GR   AL +  EM 
Sbjct: 341 YSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMH 400

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G   + ++YN++L    K    ++A+++  +++  GI+ D  TY  L+ G  K G+ D
Sbjct: 401 DRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLD 460

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           + +++FE +     SPN+ TY++LI+ +   G + E + +  + K  G   + + Y  LI
Sbjct: 461 DAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILI 520

Query: 517 DALCKNGLVESAVSLLDEMTKEGI 540
            +L +    + A  LL EM   G+
Sbjct: 521 HSLFEKDENDKAEKLLREMIARGL 544



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 229/471 (48%), Gaps = 59/471 (12%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           F  ++ +  ++   Q A+S+   M+   +KP+ +T N +++   + G   K    +F  +
Sbjct: 61  FGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLG-HIKFSFSVFAKI 119

Query: 291 LRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           L+ G  PD +TF  L+  +C +G + +A     +++V +G   D  +Y TL++ +C+  +
Sbjct: 120 LKKGYHPDAVTFTILIKGLCLKGEVHKALY-FHDKVVAQGFQLDQVSYGTLINGLCRVGE 178

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              A +++  +  K + PNVV YST+ID   K   ++DA +++ EM    I  D V+Y++
Sbjct: 179 TKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSS 238

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++S +  +G+ + A+ +   M S  I  +  T++ L+ G+ K+GK  E + +   M    
Sbjct: 239 LISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKN 298

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           V  +++TY++L+D Y       +A  +F    Q G+  DV  YS +I+  CK  +V+ A+
Sbjct: 299 VKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAM 358

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKE----SANLDAM 583
            L +EM  + I PNVVTYNS++D   +S  T C ++ V+   D G+       ++ LDA+
Sbjct: 359 KLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAI 418

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
           C  +          D  I+                             +  K+ +  I+P
Sbjct: 419 CKNN--------HVDKAIV-----------------------------LLTKIKEKGIQP 441

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIW 694
           ++ T++ ++N   +    +DA  + E+L             L+ GY  NI+
Sbjct: 442 DIFTYTVLINGLCKVGRLDDAQKVFEDL-------------LVKGYSPNIY 479



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 196/361 (54%), Gaps = 1/361 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +++   +LG +  + ++F   L +GY      F+ LI      G   +A+   + + 
Sbjct: 96  CNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVV 155

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
               + + V+Y  +I+   + G + K  V++   +    V+P+ + +++++    +  L 
Sbjct: 156 AQGFQLDQVSYGTLINGLCRVG-ETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLV 214

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A +L+ EMV + I  D+ TY++L+   C   ++  A ++   M + NI+PNV T+S +
Sbjct: 215 NDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSIL 274

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG+ K G++ +A N+ + M    + LD V+YN+++  Y  + +  +A  +   M   G+
Sbjct: 275 IDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGV 334

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  +Y+ ++ G+ K    DE  ++FE+M    + PN++TY++L+D   K G    A++
Sbjct: 335 TPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALE 394

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +  E    G  ++++ Y++++DA+CKN  V+ A+ LL ++ ++GI+P++ TY  +I+   
Sbjct: 395 LVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLC 454

Query: 556 R 556
           +
Sbjct: 455 K 455



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 204/398 (51%), Gaps = 7/398 (1%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNI 215
           A  +T L++ L  +GE  KA+  F   V  +  + DQ    + +I+ L R+G+   A  +
Sbjct: 128 AVTFTILIKGLCLKGEVHKALY-FHDKVVAQGFQLDQVSYGT-LINGLCRVGETKAAVQL 185

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CG 274
                 +     V  +S +I +  +     +A  ++  M    + P++VTY+++I   C 
Sbjct: 186 LRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCV 245

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQD 333
            G +  K+ V++F+ M+ + + P+  TF+ L+   C  G + EA +N+   M+ + +  D
Sbjct: 246 VGKL--KYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREA-KNVLAVMMKKNVKLD 302

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           + TYN+L+D  C   Q++ A  +   M  + ++P+V +YS MI+G+ K   +D+A+ +F 
Sbjct: 303 VVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFE 362

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           EM    I  + V+YN+++    K GR   AL +  EM   G   + +TYN++L    K  
Sbjct: 363 EMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNN 422

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
             D+   +  ++K   + P++ TY+ LI+   K G   +A ++F +    G   ++  Y+
Sbjct: 423 HVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYT 482

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +LI+  C  G  +  +++L +M   G  PN +TY  +I
Sbjct: 483 SLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILI 520



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 192/409 (46%), Gaps = 39/409 (9%)

Query: 286 IFDDML-RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +F+ +L +N   P  I F  +L    +   ++ A +L  +M   GI  D  T N L++  
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
            +   +  +F + A++  K   P+ VT++ +I G    G +  AL    ++   G  LD+
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           VSY T+++   ++G  + A+ + + ++   +R + V Y+ ++    K    ++   ++ +
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M +  +SP+++TYS+LI  +   G  K A+ +F       +  +V  +S LID  CK G 
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER-----DLGKQK---- 575
           V  A ++L  M K+ ++ +VVTYNS++D +       C V  V +     ++  Q+    
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGY-------CLVKQVNKAKSLFNVMAQRGVTP 336

Query: 576 ----ESANLDAMCSQDDKDVQEAGRTDNQI--------IKVFGQLVAEKAGQGKKENRCR 623
                S  ++  C    K V EA +   ++        +  +  LV      G+      
Sbjct: 337 DVWSYSIMINGFCKI--KMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTS---- 390

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
               C L +  +MH      N++T+++IL+A  + N  + A +LL +++
Sbjct: 391 ----CALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIK 435


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 187/367 (50%), Gaps = 6/367 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L R G ++ A  + E  +      + + ++ LI+     G+ ++A  +   M+ 
Sbjct: 278 NVVITGLARKGDLEEAAEMVE-GMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMEN 336

Query: 257 YNLKPNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
             + P +VTYNA+I    + G V+   V   F +M   G+QPD IT+NSLL   C  G L
Sbjct: 337 EGIMPTVVTYNAMIHGLLQSGQVEAAQVK--FVEMRAMGLQPDVITYNSLLNGYCKAGSL 394

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA   LF ++ H G+   + TYN L+D  C+   ++ A  +  EM  +   P+V TY+ 
Sbjct: 395 KEALL-LFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTI 453

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++ G   A  L  A   F EM   G+  D  +YNT +     LG   +A  + + M   G
Sbjct: 454 LMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEG 513

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I  D VTYN L+ G  K G  ++ + +  +M  + + P+ +TY+ LI  + + GL +EA 
Sbjct: 514 ISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREAR 573

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + F++    GL    V Y+  I A C+ G + SA     +M +EG+ PN +TYN +I A 
Sbjct: 574 KFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 633

Query: 555 GRSATTE 561
            R+  T+
Sbjct: 634 CRTGRTQ 640



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 179/358 (50%), Gaps = 1/358 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +AMI  L + G+V+ A+  F      G    V  +++L++ Y ++G  +EA+ +F  ++ 
Sbjct: 347 NAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRH 406

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P ++TYN +ID   + G D +    + ++M+  G  PD  T+  L+          
Sbjct: 407 AGLAPTVLTYNILIDGYCRLG-DLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLA 465

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            AR  F+EM+ +G+  D F YNT + A      +  AF +   M  + IS + VTY+ +I
Sbjct: 466 MAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILI 525

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  K G L+DA ++  +M   G+  D ++Y  ++  + + G   EA    K+M S G+ 
Sbjct: 526 DGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLA 585

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             AVTY   +  Y ++G        F +M  + V PN +TY+ LI    + G  + A + 
Sbjct: 586 PSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRH 645

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           F E  + GL  +   Y+ LID  CK G  E A+    EM + GI P+ +T+ ++   F
Sbjct: 646 FHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 168/333 (50%), Gaps = 1/333 (0%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDF 280
           NEG   TV  ++A+I    +SG  + A   F  M+   L+P+++TYN++++   K G   
Sbjct: 336 NEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAG-SL 394

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           K  + +F D+   G+ P  +T+N L+    R G  E AR L  EMV +G   D+ TY  L
Sbjct: 395 KEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTIL 454

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +        + +A E   EM +K + P+   Y+T I      G +  A  +   M   GI
Sbjct: 455 MKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGI 514

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D V+YN ++    K G   +A  +  +M  +G++ D +TY  L+  + ++G   E R+
Sbjct: 515 SSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARK 574

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
            F+ M +D ++P+ +TY+  I  Y + G    A   FR+  + G++ + + Y+ LI ALC
Sbjct: 575 FFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 634

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           + G  + A     EM + G+ PN  TY  +ID 
Sbjct: 635 RTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDG 667



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 192/385 (49%), Gaps = 22/385 (5%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F +M  +GV PD    N +L V S    W+    +  EM+  GI+  I TYNTLLD+  K
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 347 GAQMDLAFEIMAEMPAKNIS--PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
             + D    ++ EM  +     PN VT++ +I G A+ G L++A  M   M+ L      
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMR-LSKKASS 308

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +YN +++     G  ++A  +  EME+ GI    VTYNA++ G  + G+ +  +  F +
Sbjct: 309 FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M+A  + P+++TY++L++ Y K G  KEA+ +F + + AGL   V+ Y+ LID  C+ G 
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGD 428

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           +E A  L +EM ++G  P+V TY  ++    + +   C++  + R+   +  S  L   C
Sbjct: 429 LEEARRLKEEMVEQGCLPDVCTYTILM----KGSHNACSL-AMAREFFDEMLSKGLQPDC 483

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI----LCILGVFQKMHKLK 640
              +  ++ A  T   I K F +L      +G   +     I    LC  G       L+
Sbjct: 484 FAYNTRIR-AELTLGAIAKAF-RLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQ 541

Query: 641 IK-------PNVVTFSAILNA-CSR 657
           +K       P+ +T++ +++A C R
Sbjct: 542 MKMVHNGLQPDCITYTCLIHAHCER 566



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 202/426 (47%), Gaps = 30/426 (7%)

Query: 249 SVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLR--NGVQPDRITFNSLL 306
           +V   M +  ++P++VTYN ++D+  K G + K V  +  +M    +G  P+ +T N ++
Sbjct: 223 AVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDK-VAMLLKEMETRGSGCLPNDVTHNVVI 281

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
              +R G  E A  +   M         FTYN L+  +     +  A ++  EM  + I 
Sbjct: 282 TGLARKGDLEEAAEMVEGM-RLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIM 340

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P VVTY+ MI G  ++G+++ A   F EM+ +G+  D ++YN++L+ Y K G  +EALL+
Sbjct: 341 PTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLL 400

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
             ++  +G+    +TYN L+ GY + G  +E RR+ E+M      P++ TY+ L+     
Sbjct: 401 FGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHN 460

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
                 A + F E    GL+ D   Y+  I A    G +  A  L + M  EGI  + VT
Sbjct: 461 ACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVT 520

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC--------SQDDKDVQEAGRTD 598
           YN +ID   ++      ++D  +DL  +     L   C        +  ++ +    R  
Sbjct: 521 YNILIDGLCKTG----NLNDA-KDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREAR-- 573

Query: 599 NQIIKVFGQLVAEKAGQGKK------ENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAI 651
               K F  ++++                CR+  +    G F+KM +  ++PN +T++ +
Sbjct: 574 ----KFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVL 629

Query: 652 LNACSR 657
           ++A  R
Sbjct: 630 IHALCR 635



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 114/210 (54%), Gaps = 3/210 (1%)

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
           L      EM +  ++P+V   + ++   + A R DD   + +EM  LGI    V+YNT+L
Sbjct: 185 LCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLL 244

Query: 412 SIYAKLGRFEEALLVCKEMES--SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
             + K GR ++  ++ KEME+  SG   + VT+N ++ G  ++G  +E   M E M+   
Sbjct: 245 DSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK 304

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            + +  TY+ LI      G  K+A  +  E +  G+   VV Y+A+I  L ++G VE+A 
Sbjct: 305 KASS-FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQ 363

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
               EM   G++P+V+TYNS+++ + ++ +
Sbjct: 364 VKFVEMRAMGLQPDVITYNSLLNGYCKAGS 393



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 1/130 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +  I    R G +  A   F   L EG       ++ LI A  R+G  Q A   F+ M  
Sbjct: 592 TVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLE 651

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L PN  TY  +ID   K G +++  +  + +M +NG+ PD +T  +L      G +  
Sbjct: 652 RGLVPNKYTYTLLIDGNCKEG-NWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEGHMNH 710

Query: 317 AARNLFNEMV 326
           A   L N ++
Sbjct: 711 AIEYLENAVL 720


>gi|293334951|ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays]
 gi|238006488|gb|ACR34279.1| unknown [Zea mays]
 gi|413925463|gb|AFW65395.1| hypothetical protein ZEAMMB73_565010 [Zea mays]
          Length = 462

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 188/361 (52%), Gaps = 1/361 (0%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           +L +  ++ L R G +D A+++   A+  G    V  ++ L++AY R       ++V + 
Sbjct: 13  RLMNVGLASLCRGGWLDRAESVLVDAIRLGLPPDVVTYNTLLAAYCRVDGLDAGLAVVHR 72

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           M+   ++P+ VTYN++I    + G+  +  +++FD+MLR+GV PD  ++N+L+    R G
Sbjct: 73  MREAGVRPDAVTYNSLITGADRSGLTVR-ALDLFDEMLRSGVAPDSWSYNALMHCLFRSG 131

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             E A  +F +M  RG+     TYNTLLD + K   +  AF +   +    +   +VTY+
Sbjct: 132 HPEHAYRVFADMADRGVAPCATTYNTLLDGLLKAGHVTNAFRMFRYLQRAGLPVGIVTYN 191

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           TMI+G  K+G++  A  +  E+       + V+Y TV+    + GRFE+ L     +   
Sbjct: 192 TMINGLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETFLSLLEG 251

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G   DA  Y  ++    K+G+  E     E M     + +   Y+TLI +  + G   +A
Sbjct: 252 GYISDAFPYTTVISALVKKGRMQEANTYCELMIQSGSTLDNACYNTLIHLRCQEGKINDA 311

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            ++    ++ GL++D   +S L++ LCK G +E+A   +  M   G++ NVV YN +IDA
Sbjct: 312 FELLNMMEEGGLESDEYTFSILVNGLCKMGQIEAAEKQIWSMEMMGMQSNVVAYNCLIDA 371

Query: 554 F 554
            
Sbjct: 372 L 372



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 178/388 (45%), Gaps = 40/388 (10%)

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N  L ++C+G  +D A  ++ +     + P+VVTY+T++  Y +   LD  L +   M+ 
Sbjct: 16  NVGLASLCRGGWLDRAESVLVDAIRLGLPPDVVTYNTLLAAYCRVDGLDAGLAVVHRMRE 75

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G+  D V+YN++++   + G    AL +  EM  SG+  D+ +YNAL+    + G  + 
Sbjct: 76  AGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFRSGHPEH 135

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             R+F  M    V+P   TY+TL+D   K G    A ++FR  ++AGL   +V Y+ +I+
Sbjct: 136 AYRVFADMADRGVAPCATTYNTLLDGLLKAGHVTNAFRMFRYLQRAGLPVGIVTYNTMIN 195

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGR------------------ 556
            LCK+G V  A  +L E+ +    PN VTY +++     +GR                  
Sbjct: 196 GLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETFLSLLEGGYIS 255

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT--------DNQIIKVFGQL 608
            A    TV       G+ +E+     +  Q    +  A           + +I   F  L
Sbjct: 256 DAFPYTTVISALVKKGRMQEANTYCELMIQSGSTLDNACYNTLIHLRCQEGKINDAFELL 315

Query: 609 -VAEKAGQGKKENRCRQEI--LCILGVFQ-------KMHKLKIKPNVVTFSAILNACSRC 658
            + E+ G    E      +  LC +G  +        M  + ++ NVV ++ +++A  +C
Sbjct: 316 NMMEEGGLESDEYTFSILVNGLCKMGQIEAAEKQIWSMEMMGMQSNVVAYNCLIDALCKC 375

Query: 659 NSFEDASMLLEELRLFDNQVY-GVAHGL 685
           +  + A  +L  ++L D+  Y  + HGL
Sbjct: 376 HEVDAAIKILHSMKLKDDFSYTSLVHGL 403


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 174/344 (50%), Gaps = 1/344 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++  L +  K+  A  + E     G   T+  ++AL++   + G  +EAI +   +  
Sbjct: 38  TTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 97

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++VTY ++ID  GK    F+   ++F +M   G+  D + + +L+    + G   
Sbjct: 98  NGCTPDVVTYTSLIDGLGKKKRSFE-AYKLFKEMASRGLALDTVCYTALIRGLLQAGKIP 156

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +++  M  +G   D+ T +T++D +CK  ++  A  I   M A+ ++PN V YS +I
Sbjct: 157 QASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 216

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G  KA ++D AL M ++MK      D ++YN ++    K G    A     EM  +G +
Sbjct: 217 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCK 276

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  TYN L+ G+ K G  D    +F+ M +   SPN++TY TLI    K     +A   
Sbjct: 277 PDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLY 336

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           ++  K+ G   D  +YS+L+D LCK+G +E    L DEM + G+
Sbjct: 337 YQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 380



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 163/326 (50%), Gaps = 1/326 (0%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           FS LI+   ++G   +A S+           ++ TY  ++D   K     +  V + + +
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNK-KIQEAVALMEKI 60

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
             NG  P   T+N+LL    + G  E A +L  ++V  G   D+ TY +L+D + K  + 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
             A+++  EM ++ ++ + V Y+ +I G  +AG++  A +++  M   G   D V+ +T+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +    K GR   A+ + K ME+ G+  + V Y+AL+ G  K  K D    M  QMK    
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           +P+ +TY+ LID   K G    A   F E  +AG K DV  Y+ LI   CK G  ++A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGR 556
           + D+M+     PNVVTY ++I    +
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCK 326



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 210/452 (46%), Gaps = 43/452 (9%)

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
           NG   D  T+ +++   ++    + A  L  ++   G    I TYN LL+ +CK  +++ 
Sbjct: 28  NGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 87

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A +++ ++     +P+VVTY+++IDG  K  R  +A  +F EM   G+ LD V Y  ++ 
Sbjct: 88  AIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIR 147

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
              + G+  +A  V K M S G   D VT + ++ G  K G+     R+F+ M+A  ++P
Sbjct: 148 GLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 207

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           N + YS LI    K      A+++  + K+A    D + Y+ LID LCK+G V +A +  
Sbjct: 208 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFF 267

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQ 592
           DEM + G +P+V TYN +I  F +                    + N DA C   D D+ 
Sbjct: 268 DEMLEAGCKPDVYTYNILISGFCK--------------------AGNTDAACGVFD-DMS 306

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
            +  + N +   +G L+   +G  K+    +  +      +Q M +    P+   +S+++
Sbjct: 307 SSRCSPNVV--TYGTLI---SGLCKRRQLTKASLY-----YQHMKERGCPPDSFVYSSLV 356

Query: 653 NACSRCNSFEDASMLLEELRLFDNQVYGVAHG------LLMGYRDNIWVQALSLFDEVKL 706
           +   +    E   ML +E+     +  GVA+       +    + N   +A+SLF+ ++ 
Sbjct: 357 DGLCKSGKLEGGCMLFDEM-----ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRK 411

Query: 707 MDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
                  A YN++   L   G+    Q V  E
Sbjct: 412 EGMPHPYA-YNSIISALIKSGKVNEGQAVYQE 442



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 159/357 (44%), Gaps = 38/357 (10%)

Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           D+L+K     C  D   YT L+  LG +    +A + F     R    +      +A+I 
Sbjct: 90  DLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTV--CYTALIR 147

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            L + GK+  A ++++T  ++G    V   S +I    ++G    A+ +F SM+   L P
Sbjct: 148 GLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 207

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           N V Y+A+I    K        +E+   M +    PD IT+N L+    + G   AAR  
Sbjct: 208 NEVVYSALIHGLCKAR-KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAF 266

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F+EM+  G   D++TYN L+   CK    D A  +  +M +   SPNVVTY T+I G  K
Sbjct: 267 FDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCK 326

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG------- 434
             +L  A   +  MK  G   D   Y++++    K G+ E   ++  EME SG       
Sbjct: 327 RRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTR 386

Query: 435 ----------------------IRKDAV----TYNALLGGYGKQGKYDEVRRMFEQM 465
                                 IRK+ +     YN+++    K GK +E + ++++M
Sbjct: 387 TRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEM 443


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 183/333 (54%), Gaps = 1/333 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           VY+F  +I     +G  +++  +   ++ +   PN+V Y  +ID C K G + +   ++F
Sbjct: 163 VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG-EIEKAKDLF 221

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            +M + G+  +  T+  L+    + G+ +    ++ +M   G+  +++TYN +++ +CK 
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKD 281

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +   AF++  EM  + +S N+VTY+T+I G  +  + ++A  +  +MK   I  + ++Y
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITY 341

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           NT++  +  +G+  +AL +C++++S G+    VTYN L+ G+ ++G      +M ++M+ 
Sbjct: 342 NTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEE 401

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + P+ +TY+ LID +++    + A+Q+    ++ GL  DV  YS LI   C  G +  
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           A  L   M ++ + PN V YN++I  + +  ++
Sbjct: 462 ASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSS 494



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 192/365 (52%), Gaps = 5/365 (1%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I    + G+++ AK++F      G     + ++ LI    ++G  ++   ++  M
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM 259

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           + + + PNL TYN V++   K G   K   ++FD+M   GV  + +T+N+L+    R   
Sbjct: 260 QEHGVFPNLYTYNCVMNQLCKDGRT-KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A  + ++M    I+ ++ TYNTL+D  C   ++  A  +  ++ ++ +SP++VTY+ 
Sbjct: 319 ANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNV 378

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++ G+ + G    A  M  EM+  GI   +V+Y  ++  +A+    E A+ +   ME  G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELG 438

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  D  TY+ L+ G+  +G+ +E  R+F+ M    + PN + Y+T+I  Y K G    A+
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRAL 498

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++FR+ ++  L  +V  YS LI  LCK   ++ A  L+++M   GI P+    ++I +  
Sbjct: 499 RLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPS----DTICNLI 554

Query: 555 GRSAT 559
            R+ T
Sbjct: 555 SRAKT 559



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 184/347 (53%), Gaps = 1/347 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G+   V  ++ LI    + G  ++A  +F  M ++ L  N  TY  +I    K G+  K 
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIK-KQ 251

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             E+++ M  +GV P+  T+N ++    + G  + A  +F+EM  RG+  +I TYNTL+ 
Sbjct: 252 GFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            +C+  + + A ++M +M +  I+PN++TY+T+IDG+   G+L  AL++  ++K  G+  
Sbjct: 312 GLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSP 371

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
             V+YN ++S + + G    A  + KEME  GI+   VTY  L+  + +    +   ++ 
Sbjct: 372 SLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLR 431

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
             M+   + P++ TYS LI  +   G   EA ++F+   +  L+ + V+Y+ +I   CK 
Sbjct: 432 SSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKE 491

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           G    A+ L  +M ++ + PNV +Y+ +I    +    +   D VE+
Sbjct: 492 GSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEK 538



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 213/455 (46%), Gaps = 26/455 (5%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +  +I+AY +S     +I  FN M      P    +N ++     G   F      F++ 
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFV-VGSSSFNQWWCFFNES 155

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
            +  V  D  +F  ++  C   G  E + +L  E+   G   ++  Y TL+D  CK  ++
Sbjct: 156 -KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           + A ++  EM    +  N  TY+ +I G  K G       M+ +M+  G+  +  +YN V
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCV 274

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           ++   K GR ++A  V  EM   G+  + VTYN L+GG  ++ K +E  ++ +QMK+  +
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVI 334

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           +PNL+TY+TLID +   G   +A+ + R+ K  GL   +V Y+ L+   C+ G    A  
Sbjct: 335 NPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAK 394

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKE----SANLDAMC 584
           ++ EM + GI+P+ VTY  +ID F RS   E  +       +LG   +    S  +   C
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFC 454

Query: 585 SQDDKDVQEAGRTDNQIIK--------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
            +    + EA R    +++        ++  ++     +G      R        +F+ M
Sbjct: 455 IKG--QMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALR--------LFRDM 504

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            + ++ PNV ++S ++    +    ++A  L+E++
Sbjct: 505 EEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKM 539



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 94/436 (21%), Positives = 175/436 (40%), Gaps = 86/436 (19%)

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
           G L+  A++L  +++   I    FT ++LL  + +         +               
Sbjct: 52  GNLYSHAQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRL--------------- 96

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y  +I+ Y ++  LD ++  F+EM   G       +N +L+       F +      E +
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
              +  D  ++  ++ G  + G+ ++   +  +++    SPN++ Y+TLID   K G  +
Sbjct: 157 IKVVL-DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +A  +F E  + GL A+   Y+ LI  L KNG+ +    + ++M + G+ PN+ TYN   
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYN--- 272

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII--KVFGQLV 609
                     C ++ + +D G+ K     DA    D+  ++E G + N +    + G L 
Sbjct: 273 ----------CVMNQLCKD-GRTK-----DAFKVFDE--MRERGVSCNIVTYNTLIGGLC 314

Query: 610 AE-KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
            E KA +  K             V  +M    I PN++T++ +++               
Sbjct: 315 REMKANEANK-------------VMDQMKSYVINPNLITYNTLID--------------- 346

Query: 669 EELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
                      G      +G       +ALSL  ++K    S +   YN L       G 
Sbjct: 347 -----------GFCSVGKLG-------KALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGD 388

Query: 729 KRGAQLVVLEGKRRQV 744
             GA  +V E + R +
Sbjct: 389 TSGAAKMVKEMEERGI 404



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 5/174 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           Y  L+     +G+ S A +      + EER     K+  + +I    R   ++ A  +  
Sbjct: 376 YNVLVSGFCRKGDTSGAAK---MVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRS 432

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
           +    G    V+ +S LI  +   G   EA  +F SM    L+PN V YN +I    K G
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEG 492

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
             ++  + +F DM    + P+  +++ L+ V  +    + A +L  +M+  GID
Sbjct: 493 SSYR-ALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGID 545


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 224/453 (49%), Gaps = 17/453 (3%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNL--VTYNAVIDACGKGGVDFKHVVEIFD 288
            S  +    R+G   EA ++   + R      L  V +NA+ID   K   D    + + +
Sbjct: 155 MSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQ-DMAAALAVVE 213

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M   G+  D + +N+L+A     G  +AA  +   M   G++  + T+ TL+   CK  
Sbjct: 214 RMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMK 273

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +++ AF +   M    + P+VVT S ++DG  + GR  +A  +F EM  +G+  + V+Y 
Sbjct: 274 RIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYC 333

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T +   AK+ R  E+L +  EM S G+  D V Y  ++   GK+GK +E + +     +D
Sbjct: 334 TFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSD 393

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            ++PN +TY+ L+D + + G    A Q+  + ++  +  +VV +S++++ L K G +  A
Sbjct: 394 NITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKA 453

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN---LDAMCS 585
              + +M   GI PNVVTY ++ID F +    E  + DV RD+  +   AN   +D++ +
Sbjct: 454 AGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAAL-DVYRDMLHEGVEANNFIVDSLVN 512

Query: 586 --QDDKDVQEAGRTDNQIIKVFGQ--LVAEKAGQGKKENRCRQ--EILCILGVFQKMHKL 639
             + + +++EA      + K  G+  L+ +        +   +   +   L V Q++ + 
Sbjct: 513 GLRKNGNIEEA----EALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMER 568

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            + P+ V ++  +N   R   F +A   L+E+R
Sbjct: 569 NLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMR 601



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 192/393 (48%), Gaps = 3/393 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT ++  LG  G+  +A      A+      N      + ++    R G +D A+ +   
Sbjct: 367 YTTVMDRLGKEGKIEEAKDVLRHALSDNITPN--CVTYTVLVDAHCRAGNIDGAEQMLLQ 424

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +     V  FS++++   + G   +A      MK   + PN+VTY  +ID   K   
Sbjct: 425 MEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQG 484

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +  ++++ DML  GV+ +    +SL+    + G  E A  LF +M  RG+  D   Y 
Sbjct: 485 Q-EAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYA 543

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TL+D + K   M  A ++  E+  +N+SP+ V Y+  I+   + G+  +A +   EM+  
Sbjct: 544 TLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNT 603

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D+ +YNT++S   + G   +AL +  EM+ S I+ + +TY  L+ G  + G  ++ 
Sbjct: 604 GLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKA 663

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
           + +  +M +   +P  LTY  ++   S        +++      AGL AD+ +Y+ L+  
Sbjct: 664 KYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHV 723

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           LC +G+   A  +LDEM   GI P+ +T+N++I
Sbjct: 724 LCCHGMTRKATIVLDEMLGRGIAPDTITFNALI 756



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 178/372 (47%), Gaps = 34/372 (9%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I+ L RLGK   AK+  +   N G       ++ +ISA  R G   +A+ + N MK  ++
Sbjct: 581 INCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSI 640

Query: 260 KPNLVTYNAVIDACGKGGVDFKH----------------------------------VVE 285
           KPNL+TY  ++    + GV  K                                   ++E
Sbjct: 641 KPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILE 700

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           + + M+  G+  D   +N+L+ V    G+   A  + +EM+ RGI  D  T+N L+   C
Sbjct: 701 VHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHC 760

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K + +D AF   A+M  + +SPN+ T++T++ G   AGR+ +A  +  EMK +G+  + +
Sbjct: 761 KSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNL 820

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y+ +++ YAK     EAL +  EM S G    A TYN+L+  + K G  ++ + +F +M
Sbjct: 821 TYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEM 880

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           K   V     TY  L++ +SK     E   + ++ K+ G K      S++  A  K G+ 
Sbjct: 881 KRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMT 940

Query: 526 ESAVSLLDEMTK 537
             A  LL  + K
Sbjct: 941 WEARRLLKTLFK 952



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 184/401 (45%), Gaps = 38/401 (9%)

Query: 295 VQPDRITFNSL-LAVCSRGGLWEAARNLFNEM-VHRGIDQDIFTYNTLLDAICKGAQMDL 352
           V  D +T NS+ L+ CS   L  A   L +       +  D  +YN  L  + +     L
Sbjct: 76  VPGDPLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRL 135

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR---VSYNT 409
           A  +++EM  + +  + VT ST + G ++ G + +A  + +EM   G G+D    V +N 
Sbjct: 136 APPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAAL-AEMLVRGRGIDGLGVVGWNA 194

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++  Y K+     AL V + M + G+  D V YN L+ G+   G  D    + E+MKAD 
Sbjct: 195 LIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADG 254

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           V P+++T++TLI  Y K    +EA  ++    ++G+  DVV  SAL+D LC++G    A 
Sbjct: 255 VEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAY 314

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN---------- 579
           +L  EM K G+ PN VTY + ID+  +       V  V   LG   E  +          
Sbjct: 315 ALFREMDKIGVAPNHVTYCTFIDSLAK-------VQRVNESLGLLGEMVSRGVAMDLVMY 367

Query: 580 ---LDAMCS----QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILG 631
              +D +      ++ KDV     +DN         V   A        CR   I     
Sbjct: 368 TTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDA-------HCRAGNIDGAEQ 420

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           +  +M +  + PNVVTFS+ILN   +      A+  + +++
Sbjct: 421 MLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMK 461



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 153/328 (46%), Gaps = 5/328 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           ++  I+   R G   EA S    M+   L+P+  TYN +I A C +G  +    +++ ++
Sbjct: 577 YNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREG--NTSKALKLLNE 634

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M  + ++P+ IT+ +L+      G+ E A+ L NEM   G      TY  +L A C G++
Sbjct: 635 MKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQA-CSGSR 693

Query: 350 MD-LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
              +  E+   M    +  ++  Y+T++      G    A  +  EM   GI  D +++N
Sbjct: 694 SPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFN 753

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            ++  + K    + A     +M   G+  +  T+N LLGG    G+  E   +  +MK  
Sbjct: 754 ALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKM 813

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + PN LTY  L+  Y+K     EA++++ E    G       Y++LI    K G++  A
Sbjct: 814 GLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQA 873

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             L  EM + G+     TY+ +++ + +
Sbjct: 874 KELFSEMKRRGVLHTSSTYDILLNGWSK 901


>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
          Length = 378

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 164/308 (53%), Gaps = 1/308 (0%)

Query: 250 VFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC 309
           +F  M R   +P+L   N  +D   K G D +    IF+D+   G  PD  +++ L+   
Sbjct: 11  IFKEMNRRGCQPDLTLLNTYMDCVFKAG-DVEKGRAIFEDIKGYGFLPDVRSYSILIHGL 69

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
           ++ G      ++F+ M  RG   D   YN ++D  CK  ++D A+E + EM  K++ P V
Sbjct: 70  TKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTV 129

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
            TY ++IDG AK  RLD+A  +F E K  GI L+ + Y++++  + K+GR +EA L+ +E
Sbjct: 130 ATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEE 189

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M   G+  +  T+N+L+    K  + +E    F+ MK    SPN  TYS LI+   +   
Sbjct: 190 MMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 249

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
           Y +A   ++E ++ GL  +VV Y+ +I  L K G +  A SL +     G  P+  ++N+
Sbjct: 250 YNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNA 309

Query: 550 IIDAFGRS 557
           +I+    +
Sbjct: 310 LIEGMSHA 317



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 176/337 (52%), Gaps = 6/337 (1%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           + G V+  + IFE     G+   V ++S LI    ++G  +E  S+F++MK+     +  
Sbjct: 36  KAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDAR 95

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            YNAV+D  C  G VD     E  ++M    V P   T+ S++   ++    + A  LF 
Sbjct: 96  AYNAVVDGFCKSGKVD--KAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFE 153

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           E   +GI+ ++  Y++L+D   K  ++D A+ I+ EM  K ++PNV T+++++D   KA 
Sbjct: 154 EAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAE 213

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            +++AL  F  MK +    +  +Y+ +++   ++ ++ +A +  +EM+  G+  + VTY 
Sbjct: 214 EINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYT 273

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            ++ G  K G   +   +FE+ KA+   P+  +++ LI+  S      EA  +F E +  
Sbjct: 274 TMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLR 333

Query: 504 GLKADVVLYSALIDALCKNGLVESAV---SLLDEMTK 537
           G + +V    +L+DAL K   +E A    ++L E+ K
Sbjct: 334 GCRINVKACISLLDALNKAECIEQAAVVGAVLREIAK 370



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 149/353 (42%), Gaps = 24/353 (6%)

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           GR E+   + KEM   G + D    N  +    K G  ++ R +FE +K     P++ +Y
Sbjct: 3   GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 62

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           S LI   +K G  +E   IF   KQ G   D   Y+A++D  CK+G V+ A   L+EM  
Sbjct: 63  SILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKV 122

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
           + + P V TY SIID   +    +      E    K  E  N+    S  D    + GR 
Sbjct: 123 KHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIE-LNVIVYSSLID-GFGKVGRI 180

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCR-----------QEILCILGVFQKMHKLKIKPNVV 646
           D   +     ++ E   +G   N              +EI   L  FQ M ++K  PN  
Sbjct: 181 DEAYL-----ILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTY 235

Query: 647 TFSAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGYRDNIWVQALSLFDE 703
           T+S ++N   R   +  A +  +E++   L  N V        +    NI   A SLF+ 
Sbjct: 236 TYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNI-TDACSLFER 294

Query: 704 VKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDL 756
            K       +A +NAL + + H  +   A  V  E + R    NV  ++C+ L
Sbjct: 295 FKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINV--KACISL 345



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 36/254 (14%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++I  L ++ ++D A  +FE A ++G    V  +S+LI  +G+ G   EA  +   M + 
Sbjct: 134 SIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKK 193

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            L PN+ T+N+++DA  K         E  ++ L                +C        
Sbjct: 194 GLAPNVYTWNSLMDALVKA--------EEINEAL----------------IC-------- 221

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
               F  M       + +TY+ L++ +C+  + + AF    EM  + + PNVVTY+TMI 
Sbjct: 222 ----FQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIS 277

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G AK G + DA ++F   K  G   D  S+N ++   +   R  EA  V +E    G R 
Sbjct: 278 GLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRI 337

Query: 438 DAVTYNALLGGYGK 451
           +     +LL    K
Sbjct: 338 NVKACISLLDALNK 351



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 92/192 (47%), Gaps = 1/192 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++I   G++G++D A  I E  + +G    VY +++L+ A  ++    EA+  F SMK 
Sbjct: 168 SSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKE 227

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               PN  TY+ +I+   +    +      + +M + G+ P+ +T+ ++++  ++ G   
Sbjct: 228 MKCSPNTYTYSILINGLCRVQ-KYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNIT 286

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +LF      G   D  ++N L++ +    +   A+ +  E   +    NV    +++
Sbjct: 287 DACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLL 346

Query: 377 DGYAKAGRLDDA 388
           D   KA  ++ A
Sbjct: 347 DALNKAECIEQA 358



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/220 (20%), Positives = 94/220 (42%), Gaps = 31/220 (14%)

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G+ ++  ++F++M      P+L   +T +D   K G  ++   IF + K  G   DV  
Sbjct: 2   HGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRS 61

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           YS LI  L K G      S+   M + G   +   YN+++D F +S   +   + +E   
Sbjct: 62  YSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALE--- 118

Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
                           +  V+    T    +  +G ++   A    K +R  +  +    
Sbjct: 119 ----------------EMKVKHVPPT----VATYGSIIDGLA----KIDRLDEAYM---- 150

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           +F++     I+ NV+ +S++++   +    ++A ++LEE+
Sbjct: 151 LFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEM 190


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 191/390 (48%), Gaps = 40/390 (10%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           V L+K IF   +  G       F+ LI          EAI +   MK ++  P+ V+YN 
Sbjct: 193 VYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNT 252

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMV 326
           ++D  C KG ++     ++  DM  NG+ P+R TFN L++  C  G L EAA+ + + M 
Sbjct: 253 ILDVLCKKGKLN--EARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQ-VIDLMA 309

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
              +  D++TYN L+  +CK  ++D AF +  EM    + P+VVTY+T+I+G        
Sbjct: 310 QNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSL 369

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
               +  +M+  G+  + V+YN V+  Y K G+ + A    ++ME SG   D VT+N L+
Sbjct: 370 KGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLI 429

Query: 447 GGYGKQGKYDEVRRMFEQM-----KADCVSPNLL-------------------------- 475
            GY K G+  E  RM ++M     K + V+ N +                          
Sbjct: 430 NGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYF 489

Query: 476 ----TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
               +Y TLI  Y K G   EAM+++ E K+  +   ++ Y+ +I  LC +G  + ++  
Sbjct: 490 VDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDK 549

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           L+E+ + G+ P+  TYN+II  + R    E
Sbjct: 550 LNELLESGLVPDETTYNTIILGYCREGQVE 579



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 189/370 (51%), Gaps = 7/370 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++ +L + GK++ A+++     N G       F+ L+S Y + G+ +EA  V + M +
Sbjct: 251 NTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQ 310

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            N+ P++ TYN +I   C  G +D      + D+M    + PD +T+N+L+  C      
Sbjct: 311 NNVLPDVWTYNMLIGGLCKDGKID--EAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSS 368

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
                L ++M  +G+  +  TYN ++    K  +MD A   + +M     SP+ VT++T+
Sbjct: 369 LKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTL 428

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+GY KAGRL +A  M  EM   G+ ++ V+ NT+L       + ++A  +       G 
Sbjct: 429 INGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGY 488

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D V+Y  L+ GY K GK  E  +++++MK   + P+++TY+T+I      G   +++ 
Sbjct: 489 FVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSID 548

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
              E  ++GL  D   Y+ +I   C+ G VE A    ++M K+  +P++ T N ++    
Sbjct: 549 KLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILL---- 604

Query: 556 RSATTECTVD 565
           R   TE  +D
Sbjct: 605 RGLCTEGMLD 614



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 164/321 (51%), Gaps = 6/321 (1%)

Query: 235 ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC----GKGGVDFKHVVEIFDDM 290
           I AY        A  +FN MKR +LKPNL+T N +I+A      K  V       IF D+
Sbjct: 146 IGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKA--IFSDV 203

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           ++ GV+ +  TFN L+  C        A  L  +M       D  +YNT+LD +CK  ++
Sbjct: 204 IKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKL 263

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           + A +++ +M    + PN  T++ ++ GY K G L +A  +   M    +  D  +YN +
Sbjct: 264 NEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNML 323

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +    K G+ +EA  +  EME+  +  D VTYN L+ G        +   + ++M+   V
Sbjct: 324 IGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGV 383

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            PN +TY+ ++  Y K G    A    R+ +++G   D V ++ LI+  CK G +  A  
Sbjct: 384 KPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFR 443

Query: 531 LLDEMTKEGIRPNVVTYNSII 551
           ++DEM+++G++ N VT N+I+
Sbjct: 444 MMDEMSRKGLKMNSVTLNTIL 464



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 225/507 (44%), Gaps = 79/507 (15%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++S   +LG +  A  + +          V+ ++ LI    + G   EA  + + M+   
Sbjct: 288 LVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLK 347

Query: 259 LKPNLVTYNAVIDAC-----------------GKG----GVDFKHVVEIF---------- 287
           L P++VTYN +I+ C                 GKG     V +  VV+ +          
Sbjct: 348 LLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAG 407

Query: 288 ---DDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
                M  +G  PD +TFN+L+   C  G L EA R + +EM  +G+  +  T NT+L  
Sbjct: 408 NELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFR-MMDEMSRKGLKMNSVTLNTILHT 466

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +C   ++D A+++++    +    + V+Y T+I GY K G+  +A+ ++ EMK   I   
Sbjct: 467 LCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPS 526

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
            ++YNT++      G+ ++++    E+  SG+  D  TYN ++ GY ++G+ ++  +   
Sbjct: 527 IITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHN 586

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M      P+L T + L+      G+  +A+++F  +   G   D V Y+ +I  LCK  
Sbjct: 587 KMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKED 646

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
             E A  LL EM ++ + P+  TYN+I+ A                D G+ KE+    + 
Sbjct: 647 RFEEAFDLLAEMEEKKLGPDCYTYNAILSALA--------------DAGRMKEAEEFMSR 692

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
                  + E G+  +Q I +  + +   +   ++ +                      P
Sbjct: 693 -------IVEQGKLQDQTISLNKRKIESSSETSQESD----------------------P 723

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEE 670
           N VTFS  +N       ++DA  +++E
Sbjct: 724 NSVTFSEQINELCTQGKYKDAMHMVQE 750



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 164/372 (44%), Gaps = 57/372 (15%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+D A N        G+      F+ LI+ Y ++G   EA  + + M R  LK N VT 
Sbjct: 401 GKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTL 460

Query: 267 NAVIDA-CGKGGVD----------------------------FK-----HVVEIFDDMLR 292
           N ++   CG+  +D                            FK       ++++D+M  
Sbjct: 461 NTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKE 520

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
             + P  IT+N+++      G  + + +  NE++  G+  D  TYNT++   C+  Q++ 
Sbjct: 521 KEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEK 580

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           AF+   +M  K+  P++ T + ++ G    G LD AL +F+     G  +D V+YNT++S
Sbjct: 581 AFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIIS 640

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE----VRRMFEQMKAD 468
              K  RFEEA  +  EME   +  D  TYNA+L      G+  E    + R+ EQ K  
Sbjct: 641 GLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQ 700

Query: 469 -------------------CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
                                 PN +T+S  I+     G YK+AM + +E  Q G+    
Sbjct: 701 DQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHK 760

Query: 510 VLYSALIDALCK 521
             Y +L++ L K
Sbjct: 761 STYISLMEGLIK 772



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 105/259 (40%), Gaps = 69/259 (26%)

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY----SKGGLY----- 490
           V  +  +G Y    +     ++F +MK   + PNLLT +TLI+      SK  +Y     
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199

Query: 491 -----------------------------KEAMQIFREFKQAGLKADVVLYSALIDALCK 521
                                         EA+ +  + K      D V Y+ ++D LCK
Sbjct: 200 FSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCK 259

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
            G +  A  LL +M   G+ PN  T+N ++  + +              LG  KE+A + 
Sbjct: 260 KGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCK--------------LGWLKEAAQVI 305

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKI 641
            + +Q+  +V     T N +I   G L   K G+  +  R + E          M  LK+
Sbjct: 306 DLMAQN--NVLPDVWTYNMLI---GGLC--KDGKIDEAFRLKDE----------MENLKL 348

Query: 642 KPNVVTFSAILNACSRCNS 660
            P+VVT++ ++N C  C+S
Sbjct: 349 LPDVVTYNTLINGCFDCSS 367


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 186/362 (51%), Gaps = 3/362 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           RLG +  A  + E         TV+ ++ L++ +   G   EA  + + M++ N+ P++V
Sbjct: 295 RLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVV 354

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFN 323
           TYN +ID C +   D   V  + ++M + GV+ + +T+N +L  +C +G + EA   L +
Sbjct: 355 TYNTLIDGCSQWR-DSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTL-D 412

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           +M   G+  D  TYNTL+ A CK  +M  AF +M EM +K +  +  T +T++       
Sbjct: 413 KMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEK 472

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           +LD+A N+       G  LD VSY  ++  Y K  + + AL +  EM+   I    +TYN
Sbjct: 473 KLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYN 532

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           +++GG  +  K D+      +M  + + P+  TY+ +I  +   G  ++A Q   E  + 
Sbjct: 533 SVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIEN 592

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
             K DV   + L+  LC+ G++E A+ L + +  +G   +VVTYN+II +  +    E  
Sbjct: 593 LFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENA 652

Query: 564 VD 565
            D
Sbjct: 653 YD 654



 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 225/468 (48%), Gaps = 9/468 (1%)

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           LA+ + + ++  G      +F+ LI  Y      ++A+   N M  +   P+ V+YN ++
Sbjct: 196 LARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTIL 255

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           DA  K  +  +   ++  DM   G+ P++ T+N L+    R GL + A  +   M    +
Sbjct: 256 DALLKRRL-LQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNL 314

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
              ++TYN L++  C   ++D AF I  EM   N+ P+VVTY+T+IDG ++     +  +
Sbjct: 315 LPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYS 374

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +  EM   G+  + V+YN +L    K G   EA     +ME +G+  D VTYN L+G Y 
Sbjct: 375 LIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYC 434

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K GK  +  RM ++M +  +  +  T +T++          EA  +     + G   D V
Sbjct: 435 KAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEV 494

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD---- 566
            Y  LI    K+   + A++L DEM +  I P+ +TYNS+I    +S   +  +D     
Sbjct: 495 SYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEM 554

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK-VFGQLVAEKAGQGKKENRCRQE 625
           +E  L   + + N+       + +V++A +  N++I+ +F   V            CR+ 
Sbjct: 555 LENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVY--TCNILLRGLCREG 612

Query: 626 IL-CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           +L   L +F  +       +VVT++ I+++  +   FE+A  LL E+ 
Sbjct: 613 MLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEME 660



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 215/463 (46%), Gaps = 44/463 (9%)

Query: 235 ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK--GGVDFKHVVEIFDDMLR 292
           I AY +      A  +FN MKR N +PNL+T N ++++  +           ++  D ++
Sbjct: 147 IGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIK 206

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
            GV P+  +FN L+         + A +  N+M   G   D  +YNT+LDA+ K   +  
Sbjct: 207 LGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQE 266

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A +++ +M +K +SPN  TY+ ++ GY + G L +A  +   M    +     +YN +++
Sbjct: 267 ARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVN 326

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
            +   G+ +EA  +  EME   +  D VTYN L+ G  +     EV  + E+M    V  
Sbjct: 327 GFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKC 386

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           N +TY+ ++    K G   EA     + ++ GL  D V Y+ LI A CK G +  A  ++
Sbjct: 387 NAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMM 446

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQ 592
           DEMT +G++ +  T N+I+          C    VE+ L    E+ NL  +CS   +   
Sbjct: 447 DEMTSKGLKIDTWTLNTILHCL-------C----VEKKLD---EAYNL--LCSASKR--- 487

Query: 593 EAGRTDNQI---IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
             G   +++   I + G    EK  +              L ++ +M + +I P+ +T++
Sbjct: 488 --GYILDEVSYGILILGYFKDEKGDRA-------------LNLWDEMKERQIMPSTITYN 532

Query: 650 AILNACSRCNSFEDA----SMLLEELRLFDNQVYG-VAHGLLM 687
           +++    +    + A    + +LE   + D   Y  + HG  +
Sbjct: 533 SVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCL 575



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 154/316 (48%), Gaps = 17/316 (5%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K+D A N+  +A   GY     ++  LI  Y +      A+++++ MK   + P+ +TYN
Sbjct: 473 KLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYN 532

Query: 268 AVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEM 325
           +VI   C    VD    ++  ++ML NG+ PD  T+N ++   C  G + E A    NEM
Sbjct: 533 SVIGGLCQSRKVD--QAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNV-EKAFQFHNEM 589

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           +      D++T N LL  +C+   ++ A ++   + +K    +VVTY+T+I    K G+ 
Sbjct: 590 IENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKF 649

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           ++A ++ +EM+   +G D+ +Y  +++     GR +EA     +M  SGI  D      L
Sbjct: 650 ENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHD----QNL 705

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
             G G+     EV   F+  K+       + YS  I+       YK+AM +F E  + G+
Sbjct: 706 KLGKGQNVLTSEVSEHFD-FKS-------IAYSDQINELCNQHKYKDAMHLFVEVTKEGV 757

Query: 506 KADVVLYSALIDALCK 521
             +   Y  L++ L K
Sbjct: 758 ALNKYTYLNLMEGLIK 773



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 131/281 (46%), Gaps = 28/281 (9%)

Query: 200 ISILGRLG--KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           I ILG     K D A N+++         +   ++++I    +S    +AI   N M   
Sbjct: 498 ILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLEN 557

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            L P+  TYN +I   C +G V+     +  ++M+ N  +PD  T N LL    R G+ E
Sbjct: 558 GLVPDETTYNIIIHGFCLEGNVE--KAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLE 615

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LFN +V +G D D+ TYNT++ ++CK  + + A++++ EM AK + P+  TY  +I
Sbjct: 616 KALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVII 675

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDR-----------------------VSYNTVLSI 413
                AGR+ +A     +M   GI  D+                       ++Y+  ++ 
Sbjct: 676 AALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINE 735

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
                ++++A+ +  E+   G+  +  TY  L+ G  K+ K
Sbjct: 736 LCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRK 776



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 94/418 (22%), Positives = 172/418 (41%), Gaps = 73/418 (17%)

Query: 361 PAKNI-SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF---------------------- 397
           P +++  P+     T I  Y +  +   A  +F++MK                       
Sbjct: 131 PTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPS 190

Query: 398 ----------------LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
                           LG+  +  S+N ++  Y    + ++AL    +M   G   D V+
Sbjct: 191 SSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVS 250

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN +L    K+    E R +   MK+  +SPN  TY+ L+  Y + GL KEA ++     
Sbjct: 251 YNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMT 310

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +  L   V  Y+ L++  C +G ++ A  + DEM K  + P+VVTYN++ID   +   + 
Sbjct: 311 RNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSS 370

Query: 562 CTVDDVERDLGKQKESAN-------LDAMCSQDD--------KDVQEAGRTDNQIIKVFG 606
                +E ++ K+    N       L  MC + +          ++E G + + +   + 
Sbjct: 371 EVYSLIE-EMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCV--TYN 427

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            L+      GK     R        +  +M    +K +  T + IL+        ++A  
Sbjct: 428 TLIGAYCKAGKMGKAFR--------MMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYN 479

Query: 667 LL----EELRLFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
           LL    +   + D   YG+   L++GY +D    +AL+L+DE+K      ++  YN++
Sbjct: 480 LLCSASKRGYILDEVSYGI---LILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSV 534


>gi|9755886|emb|CAC01940.1| 67kD chloroplastic RNA-binding protein, P67.1 [Raphanus sativus]
          Length = 700

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 162/633 (25%), Positives = 273/633 (43%), Gaps = 90/633 (14%)

Query: 232 SALISAYGRSGYCQEAISVFNSMKR------------YNLKPN--LVTYNAVIDACGKGG 277
           S +I+ +G   + Q+A+   N+M                LKP   ++ YN  +    K  
Sbjct: 128 SDVIAKFGSKLFEQDAVVTLNNMTNPETAPLVLNNLLETLKPTREVILYNVTMKVFRKSK 187

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            D +   ++FD+ML+ GV+PD  TF +L++   + GL + A   F +M   G++ D  T 
Sbjct: 188 -DLEKSEKLFDEMLQRGVKPDNATFTTLISCARQCGLPKRAVEWFEKMPSFGLEPDNVTL 246

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             ++DA  +   +++A  +      +    + VT+ST+I  Y  AG  D  LN++ EMK 
Sbjct: 247 AAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAGNYDGCLNIYEEMKS 306

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           LG+  + V YN +L    K  R  +A ++ K++ S+G   +  TY AL+  YG+    ++
Sbjct: 307 LGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAALIRAYGRARYGED 366

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG-LKADVVLYSALI 516
              ++ QMK   +   ++ Y+TL+ + +  G   EA +IF++ K +G  + D   +S+LI
Sbjct: 367 ALVIYRQMKGKGLELTVILYNTLLSMCADIGYVDEAFEIFQDMKSSGTCEPDSWTFSSLI 426

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
                 G V  A + L EM + G  P +    S+I  +G++      VDDV R   +  E
Sbjct: 427 TVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAK----QVDDVVRTFEQVLE 482

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
                         ++   R    ++ V  Q   E+ G         + I C+     K+
Sbjct: 483 LG------------IEPDDRFCGCLLNVMTQTPTEEIG---------KLIECVEKAKPKL 521

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQ 696
            ++                          ML+EE    +N   GV              +
Sbjct: 522 GRV------------------------VKMLVEE----ENCEEGVLKK-----------E 542

Query: 697 ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLD- 755
           A  L D +    S    A+ N L D+  +  +   A  ++  G    ++  + S+S    
Sbjct: 543 ASELIDSI---GSDVNKAYLNCLIDLCVNLNKLEKACEILQLGLEYDIYSGLQSKSATQW 599

Query: 756 -LHL--MSSGAARAMVHAWLLNI-HSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAV 811
            LHL  +S GAA   +H W+ ++  + +  G E P LL I TG GKH     D  L    
Sbjct: 600 SLHLKSLSLGAALTALHVWMNDLSEAALTSGEEFPPLLGINTGHGKHK--YSDKGLAAVF 657

Query: 812 EVLLTGMGAPFWVANCNLGRFISTGPMVASWLR 844
           E  L  + APF  A   +G F++T     +WL 
Sbjct: 658 ESHLKELNAPFHEAPDKVGWFLTTSVAAKTWLE 690



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/479 (22%), Positives = 213/479 (44%), Gaps = 28/479 (5%)

Query: 65  PAATSTTVAPNPKPFHSLS-----------PLPSSKSELAPDFSGRRSTRFVSKMHFGRP 113
           P +  ++  PN  PFHS +           PLP       P+           +  +  P
Sbjct: 31  PRSFVSSYNPNSPPFHSRTLLQTSHVSLQEPLPQETQIEKPELEANPPASGSKRYAWVNP 90

Query: 114 KI---------AMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLR 164
           K          +  +R+S + + A   + +   ++  + D++ KF  KL    D    L 
Sbjct: 91  KSPRASQLRRKSYDSRYSSLVKLA-ESLDSCPANEADVSDVIAKFGSKLF-EQDAVVTLN 148

Query: 165 ELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGY 224
            + N       +      +K       +  L +  + +  +   ++ ++ +F+  L  G 
Sbjct: 149 NMTNPETAPLVLNNLLETLK----PTREVILYNVTMKVFRKSKDLEKSEKLFDEMLQRGV 204

Query: 225 GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVV 284
                 F+ LIS   + G  + A+  F  M  + L+P+ VT  A+IDA G+ G + +  +
Sbjct: 205 KPDNATFTTLISCARQCGLPKRAVEWFEKMPSFGLEPDNVTLAAMIDAYGRAG-NVEMAL 263

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
            ++D       + D +TF++L+ +    G ++   N++ EM   G+  ++  YN LLD++
Sbjct: 264 SLYDRARTEKWRIDPVTFSTLIRIYGYAGNYDGCLNIYEEMKSLGVKPNLVIYNRLLDSM 323

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
            K  +   A  I  ++ +    PN  TY+ +I  Y +A   +DAL ++ +MK  G+ L  
Sbjct: 324 GKAKRPWQATMIHKDLISNGFEPNWSTYAALIRAYGRARYGEDALVIYRQMKGKGLELTV 383

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGI-RKDAVTYNALLGGYGKQGKYDEVRRMFE 463
           + YNT+LS+ A +G  +EA  + ++M+SSG    D+ T+++L+  Y   G+  E      
Sbjct: 384 ILYNTLLSMCADIGYVDEAFEIFQDMKSSGTCEPDSWTFSSLITVYSCCGRVSEAEAALR 443

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           +M+     P L   ++LI  Y K     + ++ F +  + G++ D      L++ + + 
Sbjct: 444 EMREAGFEPTLFVLTSLIQCYGKAKQVDDVVRTFEQVLELGIEPDDRFCGCLLNVMTQT 502



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 165/358 (46%), Gaps = 42/358 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +AMI   GR G V++A ++++ A  E +      FS LI  YG +G     ++++  MK 
Sbjct: 247 AAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAGNYDGCLNIYEEMKS 306

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +KPNLV YN ++D+ GK    ++  + I  D++ NG +P+  T+ +L+    R    E
Sbjct: 307 LGVKPNLVIYNRLLDSMGKAKRPWQATM-IHKDLISNGFEPNWSTYAALIRAYGRARYGE 365

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYSTM 375
            A  ++ +M  +G++  +  YNTLL        +D AFEI  +M +     P+  T+S++
Sbjct: 366 DALVIYRQMKGKGLELTVILYNTLLSMCADIGYVDEAFEIFQDMKSSGTCEPDSWTFSSL 425

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I  Y+  GR+ +A     EM+  G                    FE  L V         
Sbjct: 426 ITVYSCCGRVSEAEAALREMREAG--------------------FEPTLFV--------- 456

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
                   +L+  YGK  + D+V R FEQ+    + P+      L++V ++    +E  +
Sbjct: 457 ------LTSLIQCYGKAKQVDDVVRTFEQVLELGIEPDDRFCGCLLNVMTQTPT-EEIGK 509

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVS-LLDEMTKEGIRPNVVTYNSIID 552
           +    ++A  K   V+   + +  C+ G+++   S L+D +   G   N    N +ID
Sbjct: 510 LIECVEKAKPKLGRVVKMLVEEENCEEGVLKKEASELIDSI---GSDVNKAYLNCLID 564


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 138/543 (25%), Positives = 245/543 (45%), Gaps = 45/543 (8%)

Query: 49  SLTKPPLSPSPR---NAPKPAATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTR-- 103
           +L + P  P P+   +   P   S        PF   S LP S S   PD     S    
Sbjct: 16  ALLRNPFDPMPKFSIHQLNPLTISLHKPARLSPFFYFSSLPLS-SNSTPDAQNELSISPQ 74

Query: 104 -FVSKMHFGRPKIAMSTRHSVVAEEA-------LHHVT-AFARDDVSLGDILKKFEFKLC 154
            F S+  FG  K+  +T + ++   A       +H V     R+   L + +    FK C
Sbjct: 75  IFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKAC 134

Query: 155 G-----ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKV 209
           G      +   F  R + N     + ++ F   +    ++ D        + + G     
Sbjct: 135 GKAHLPGEAVNFFHR-MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFG----- 188

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
                    A ++G+   +  ++ +I A  + G    A+  F  M   N  P++ TY+ +
Sbjct: 189 ---------ANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTL 239

Query: 270 IDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           ++  C +  VD    V + D+M   G  P+ +TFN L+   S+ G    A  L + M  +
Sbjct: 240 MNGLCKERRVD--EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLK 297

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   +  TYNTL+  +C   ++D A  ++ +M +    PN VTY T+I+G  K  R +D 
Sbjct: 298 GCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDG 357

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           +++   M+  G   +   Y++++S   K G+ E A+ + KEM   G + + V Y A + G
Sbjct: 358 VHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDG 417

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             +  K DE   + ++M +    PN  TYS+L+  + K G  ++A+ +++E     ++ +
Sbjct: 418 LCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHN 477

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
           VV  S L++ LC++G +  A+++   M  EG++P+VV Y+S+I          C V  V+
Sbjct: 478 VVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGL-------CDVGSVD 530

Query: 569 RDL 571
           + L
Sbjct: 531 KGL 533



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 229/463 (49%), Gaps = 17/463 (3%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR-YNLKPNLVTYNAVIDACGKGGVDF 280
           EG   T   F  +  A G++    EA++ F+ M    + K  + ++N+V++   + G DF
Sbjct: 118 EGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEG-DF 176

Query: 281 KHVVEIFDDML---RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            +  + +  +      G QP+ +T+N ++    + G  + A + F EM  +  + D+FTY
Sbjct: 177 SYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTY 236

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           +TL++ +CK  ++D A  ++ EM A+   PN VT++ +ID  +K G L  A  +   M  
Sbjct: 237 STLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFL 296

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   + V+YNT++      G+ ++AL + ++M SS    + VTY  ++ G  KQ + ++
Sbjct: 297 KGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAED 356

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +   M+      N   YS+LI    K G  + A+++++E  + G K +VV+Y A ID
Sbjct: 357 GVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFID 416

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            LC++   + A  +L EM  +G  PN  TY+S++  F +   ++  +  V +++  Q   
Sbjct: 417 GLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAIL-VWKEMMSQDMR 475

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
            N+   CS     + E+GR   + + V+  ++ E             + LC +G   K  
Sbjct: 476 HNV-VCCSVLLNGLCESGRL-REALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGL 533

Query: 638 KL---------KIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           KL         K +P+VVT++ + NA  R ++   A  LL  +
Sbjct: 534 KLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 576



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 91/407 (22%), Positives = 158/407 (38%), Gaps = 37/407 (9%)

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           T+  +I+ YA +        +   MK  G  L    +  +     K     EA+     M
Sbjct: 91  TFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRM 150

Query: 431 ESSGIRKDAV-TYNALLGGYGKQGKYDEVRRMFEQM---KADCVSPNLLTYSTLIDVYSK 486
            +    K  V ++N++L    ++G +    + +  +    +    PNLLTY+ +I    K
Sbjct: 151 ANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCK 210

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G    A+  FRE        DV  YS L++ LCK   V+ AV LLDEM  EG  PN VT
Sbjct: 211 LGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVT 270

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG 606
           +N +IDA  ++            DL +  +  +          ++   G   N++   + 
Sbjct: 271 FNVLIDALSKNG-----------DLSRAAKLVD----------NMFLKGCVPNEV--TYN 307

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            L+     +GK +          L + +KM   K  PN VT+  I+N   +    ED   
Sbjct: 308 TLIHGLCLKGKLDK--------ALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVH 359

Query: 667 LLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLW 724
           +L  +     +     +  L+   +++     A+ L+ E+           Y A  D L 
Sbjct: 360 ILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLC 419

Query: 725 HFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAW 771
              +   A+ ++ E   +    N ++ S L       G ++  +  W
Sbjct: 420 RDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVW 466



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 121/282 (42%), Gaps = 45/282 (15%)

Query: 151 FKLCGADDYTFLLRELGNRGEWSKAIQCFAF--AVKREERKNDQGKLASAMIS------- 201
           FK   +++   L +E+  +G     +   AF   + R+E+ ++   +   M+S       
Sbjct: 384 FKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNA 443

Query: 202 ------ILGRLGKVDLAKNI--FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
                 + G   K D  K I  ++  +++   + V   S L++    SG  +EA++V+  
Sbjct: 444 FTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTH 503

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDML--RNGVQPDRITFNSLL-AVC 309
           M    LKP++V Y+++I   C  G VD    +++F +M       +PD +T+N L  A+C
Sbjct: 504 MLGEGLKPDVVAYSSMIKGLCDVGSVD--KGLKLFYEMQCQEPKSRPDVVTYNILFNALC 561

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA---------------------ICKGA 348
            +  L  A  +L N M+  G D D  T N  L+                      + K  
Sbjct: 562 RQDNLTRAI-DLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRE 620

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
           +   A  I+ EM  + + P   T+S +I    K  R+ + ++
Sbjct: 621 RKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETID 662


>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
 gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 583

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 207/397 (52%), Gaps = 15/397 (3%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+  G+LG  + A+ +       G    V +++AL+ +YGR G C  A ++F  M+   
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML---RNGVQPDRITFNSLLAVCSRGGLW 315
            +P+ +TY  ++    +G   FK   E+F+ +L   ++ ++PD+  ++ ++ +  + G +
Sbjct: 205 PEPSAITYQIILKTFVEGD-KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E AR +F+ MV +G+ Q   TYN+L+       ++    +I  +M   +I P+VV+Y+ +
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALL 320

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I  Y +A R ++AL++F EM   G+     +YN +L  +A  G  E+A  V K M    I
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  +Y  +L  Y      +   + F+++K D   PN++TY TLI  Y+K    ++ M+
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 440

Query: 496 IFREFKQAGLKADVVLYSALIDA--LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           ++ + + +G+KA+  + + ++DA   CKN    SA+    EM   G+ P+    N ++  
Sbjct: 441 VYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGVPPDQKAKNVLLSL 498

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
               A+T+  +++ +   G + E+A + A     D D
Sbjct: 499 ----ASTQDELEEAKELTGIRNETATIIARVYGSDDD 531



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 143/346 (41%), Gaps = 63/346 (18%)

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           + +  +I  Y K G  + A  + S +  +G   + +SY  ++  Y + G+   A  + + 
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM---KADCVSPNLLTYSTLIDVYSK 486
           M+SSG    A+TY  +L  + +  K+ E   +FE +   K   + P+   Y  +I +Y K
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259

Query: 487 GG--------------------------------LYKEAMQIFREFKQAGLKADVVLYSA 514
            G                                 YKE  +I+ + +++ ++ DVV Y+ 
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYAL 319

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC--TV------DD 566
           LI A  +    E A+S+ +EM   G+RP    YN ++DAF  S   E   TV      D 
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379

Query: 567 VERDLGKQKESANLDAMCSQDD--------KDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
           +  DL     +  L A  +  D        K ++  G   N  I  +G L+   A     
Sbjct: 380 IFPDLWSY--TTMLSAYVNASDMEGAEKFFKRIKVDGFEPN--IVTYGTLIKGYAKANDV 435

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           E         ++ V++KM    IK N    + I++A  RC +F  A
Sbjct: 436 EK--------MMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSA 473



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 148/328 (45%), Gaps = 30/328 (9%)

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           FSE+ FL           +++ Y KLG F  A  V   +   G   + ++Y AL+  YG+
Sbjct: 137 FSEIDFL----------MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGR 186

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF---KQAGLKAD 508
            GK +    +F +M++    P+ +TY  ++  + +G  +KEA ++F      K++ LK D
Sbjct: 187 GGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPD 246

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
             +Y  +I    K G  E A  +   M  +G+  + VTYNS++       + E +  +V 
Sbjct: 247 QKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM-------SFETSYKEVS 299

Query: 569 RDLGK-QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
           +   + Q+     D +            R + + + VF +++        K      +  
Sbjct: 300 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 359

Query: 628 CILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG 680
            I G       VF+ M + +I P++ +++ +L+A    +  E A    + +++   +   
Sbjct: 360 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 419

Query: 681 VAHG-LLMGY-RDNIWVQALSLFDEVKL 706
           V +G L+ GY + N   + + ++++++L
Sbjct: 420 VTYGTLIKGYAKANDVEKMMEVYEKMRL 447



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/282 (21%), Positives = 124/282 (43%), Gaps = 33/282 (11%)

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           + +  LI  Y K G +  A ++     + G   +V+ Y+AL+++  + G   +A ++   
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199

Query: 535 MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEA 594
           M   G  P+ +TY  I+  F            VE D  K+ E    + +  +    ++  
Sbjct: 200 MQSSGPEPSAITYQIILKTF------------VEGDKFKEAEEV-FETLLDEKKSPLKPD 246

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
            +  + +I ++     +KAG  +K  +          VF  M    +  + VT+++++  
Sbjct: 247 QKMYHMMIYMY-----KKAGNYEKARK----------VFSSMVGKGVPQSTVTYNSLM-- 289

Query: 655 CSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTA 712
            S   S+++ S + ++++  D Q   V++ LL+  Y R     +ALS+F+E+        
Sbjct: 290 -SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPT 348

Query: 713 SAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
              YN L D     G    A+ V    +R +++ ++WS + +
Sbjct: 349 HKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 390


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 159/293 (54%), Gaps = 3/293 (1%)

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           L  N VT NA++   C +G ++   V E+   ML  G+  DRI++N+L+  C + G  E 
Sbjct: 497 LAANTVTSNALLHGLCERGNME--EVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEE 554

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  L  EMV +    D +TYN L+  +    ++D    ++ E       PNV TY+ +++
Sbjct: 555 AFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLE 614

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GY KA R++DA+  F  + +  + L  V YN +++ Y ++G   EA  +   M+S GI  
Sbjct: 615 GYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILP 674

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
              TY++L+ G    G+ DE + +FE+M+ + + PN+  Y+ LI  + K G       I 
Sbjct: 675 TCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSIL 734

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            E    G++ + + Y+ +ID  CK G ++ A  LL+EM + GI P+ VTYN++
Sbjct: 735 LEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNAL 787



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 212/483 (43%), Gaps = 72/483 (14%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
           +V  +  LIS   +    +EA  V   M      PN V +NA+ID  C KG  D    + 
Sbjct: 324 SVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKG--DMGEALR 381

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG--IDQDIFTY------ 337
           + D+M   G++P+ +TFN+LL    R    E A  +   ++  G  ++ D+ +Y      
Sbjct: 382 VRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLM 441

Query: 338 ---------------------------NTLLDAICKGAQMDLAFEIMAEMPA-KNISPNV 369
                                        L+  +CK      A E+  ++ A K ++ N 
Sbjct: 442 ERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANT 501

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           VT + ++ G  + G +++   +  +M   G+ LDR+SYNT++    K G+ EEA  + +E
Sbjct: 502 VTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEE 561

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M     + D  TYN L+ G    GK D+V R+  + K     PN+ TY+ L++ Y K   
Sbjct: 562 MVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADR 621

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
            ++A++ F+      ++   V+Y+ LI A C+ G V  A  L D M   GI P   TY+S
Sbjct: 622 IEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSS 681

Query: 550 IIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
           +I          C +  V+                  + K++ E  R +  +  VF    
Sbjct: 682 LIHGM-------CCIGRVD------------------EAKEIFEEMRNEGLLPNVFCY-T 715

Query: 610 AEKAGQGKKENRCRQEILCILG-VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
           A   G       C+   + I+G +  +M    I+PN +T++ +++   +  + ++A  LL
Sbjct: 716 ALIGGH------CKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELL 769

Query: 669 EEL 671
            E+
Sbjct: 770 NEM 772



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 223/517 (43%), Gaps = 53/517 (10%)

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +IF    + GV P   T N LL+   +      +  +F ++  +G+  D+FT+ T ++A 
Sbjct: 207 DIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAF 265

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CKG ++  A ++  +M    + PNVVTY+ +IDG  K+GR ++AL     M    +    
Sbjct: 266 CKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSV 325

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V+Y  ++S   KL  FEEA  V  EM S G   + V +NAL+ GY ++G   E  R+ ++
Sbjct: 326 VTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDE 385

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    + PN +T++TL+  + +    ++A Q+      +GL  ++ + S +I  L +   
Sbjct: 386 MAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSG 445

Query: 525 VESAVSLLDEMTKEGIR-------PNVVTYNSIIDAFGRSATTECTVD-DVERDLGKQKE 576
             SA+ ++ ++    IR       P VV    +    G S   E        + L     
Sbjct: 446 FVSALKIVTKLLSGNIRVSDSLLTPLVV---GLCKCEGHSEAIELWFKLAAVKGLAANTV 502

Query: 577 SAN--LDAMCSQDD--------KDVQEAGRTDNQIIKVFGQLVAEKAGQGK-------KE 619
           ++N  L  +C + +        K + E G   ++I   +  L+      GK       KE
Sbjct: 503 TSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRI--SYNTLIFGCCKWGKIEEAFKLKE 560

Query: 620 NRCRQEI-------------LCILGVFQKMHKL-------KIKPNVVTFSAILNACSRCN 659
              +QE              L  +G    +H+L          PNV T++ +L    + +
Sbjct: 561 EMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKAD 620

Query: 660 SFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNI--WVQALSLFDEVKLMDSSTASAFYN 717
             EDA    + L     ++  V + +L+     I    +A  L D +K        A Y+
Sbjct: 621 RIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYS 680

Query: 718 ALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
           +L   +   G+   A+ +  E +   +  NV+  + L
Sbjct: 681 SLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTAL 717



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 127/235 (54%), Gaps = 1/235 (0%)

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A ++F     RG+   + T N LL ++ K  ++  ++E+  ++  + ++P+V T++T I
Sbjct: 204 CAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAI 262

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           + + K GR+ DA+++F +M+ LG+  + V+YN V+    K GRFEEAL     M  S + 
Sbjct: 263 NAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVN 322

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              VTY  L+ G  K   ++E   +  +M +   +PN + ++ LID Y + G   EA+++
Sbjct: 323 PSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRV 382

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
             E    G+K + V ++ L+   C++  +E A  +L  +   G+  N+   + +I
Sbjct: 383 RDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVI 437


>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 731

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 177/333 (53%), Gaps = 3/333 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           +  S ++  Y +S    +A+ VF  M   NLKP+L     ++++  K G+    V +++ 
Sbjct: 131 HVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGIT-SMVWKVYK 189

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M+++GV P+   +N L+  CS+    E A  + NEM  +G+  DIFTYNTL+   CK  
Sbjct: 190 RMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKG 249

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
               A  +  +M  + I+ ++V+Y+++I G+ K G++ +A+ MF E+K      + V+Y 
Sbjct: 250 LHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIK--DAIPNHVTYT 307

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T++  Y K   FEEAL + + M + G+    VTYN++L      G+  +  ++  +M   
Sbjct: 308 TLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSER 367

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V  + +T +TLI+ Y K G    A++   +  +AGL  +   Y ALI   CK   +ESA
Sbjct: 368 KVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESA 427

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             LL  M   G  PN  TY+ I+D++ +   T+
Sbjct: 428 KELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTD 460



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 224/476 (47%), Gaps = 19/476 (3%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + +++ L + G   +   +++  + +G    +Y ++ LI A  +S   + A  + N M+
Sbjct: 168 CTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEME 227

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
              + P++ TYN +I    K G+ ++  + + D M R G+  D +++NSL+   C  G +
Sbjct: 228 VKGVVPDIFTYNTLIALYCKKGLHYE-ALSVQDKMEREGINLDIVSYNSLIYGFCKEGKM 286

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            EA R +F E +   I   + TY TL+D  CK  + + A  +   M AK + P VVTY++
Sbjct: 287 REAMR-MFGE-IKDAIPNHV-TYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNS 343

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++      GR+ DA  +  EM    +  D V+ NT+++ Y K+G    AL    +M  +G
Sbjct: 344 ILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAG 403

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  ++ TY AL+ G+ K  + +  + +   M     SPN  TYS ++D Y K       +
Sbjct: 404 LTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVL 463

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +  EF   G   ++ LY ALI  LCK   +E A  LL  M  +GI  + V Y S+  ++
Sbjct: 464 ALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSY 523

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            +S  T    D +E ++ +++    +         D  +     N++ ++F   V E+  
Sbjct: 524 WKSGNTNAASDMLE-EMARRRLMITVKIYRCFSALDASQ-----NKVSQMFWDHVVERGL 577

Query: 615 QGKKENRCRQEILCILGVFQK--MHKLKI------KPNVVTFSAILNACSRCNSFE 662
             +      Q++  I   +Q+  +H          KP +  F+ I NAC   N  E
Sbjct: 578 MSRNTMYKIQQMPFISSGYQRVFLHVFTCHAGTLYKPCLKLFNLISNACDHENQVE 633



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 33/258 (12%)

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           YAK     +A+ V ++M    ++        L+    K G    V +++++M  D V PN
Sbjct: 140 YAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPN 199

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           +  Y+ LI   SK    + A  I  E +  G+  D+  Y+ LI   CK GL   A+S+ D
Sbjct: 200 IYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQD 259

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
           +M +EGI  ++V+YNS+I  F +               GK +E+  +      + KD   
Sbjct: 260 KMEREGINLDIVSYNSLIYGFCKE--------------GKMREAMRMFG----EIKDAIP 301

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
              T   +I  +      KA + ++  R R E++   G++         P VVT+++IL 
Sbjct: 302 NHVTYTTLIDGYC-----KANEFEEALRLR-EMMVAKGLY---------PGVVTYNSILR 346

Query: 654 ACSRCNSFEDASMLLEEL 671
                    DA+ LL E+
Sbjct: 347 KLCSDGRIRDANKLLHEM 364


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 245/548 (44%), Gaps = 59/548 (10%)

Query: 200 ISILGRLGKVDL--AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           I + G L K  L   K I    + EG   +   F++LI AY RSG    A  +   M   
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEI----FDDMLRNGVQPDRITFNSLLAVCSRG 312
             +P  V YN +I   CG   +    V+E+    + +ML   V  +++  ++L       
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G +E A ++  EM+ +G   D  TY+ ++  +C  +++D AF +  EM + ++ P+V TY
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +ID + K G L  A   F EM   G   + V+Y  ++  Y K  +   A  + + M S
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC----------------VSPNLLT 476
            G   + VTY AL+ G+ K G+ ++  +++ +M+ +                   PN+ T
Sbjct: 579 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFT 638

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y  L+D   K    KEA  +       G + + ++Y ALID  CK G ++ A  +  +M+
Sbjct: 639 YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMS 698

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE------SANLDAMCSQDDKD 590
           + G  PNV TY+S+ID   +    +  +  + R L           +  +D +C     D
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 591 --------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
                   ++E G   N +       + +  G+  K ++C       L + ++M      
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYT---AMIDGFGKAGKVDKC-------LELMRQMGAKGCA 808

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNI------WVQ 696
           PN VT+  ++N C      +DA  LL+E++    Q Y   H  + GYR  I      ++ 
Sbjct: 809 PNFVTYRVLINHCCAAGLLDDAHQLLDEMK----QTYWPKH--MAGYRKVIEGFNREFII 862

Query: 697 ALSLFDEV 704
           +L L DE+
Sbjct: 863 SLGLLDEI 870



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 184/378 (48%), Gaps = 21/378 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I +L    KVD A  +FE   +      V+ ++ LI ++ + G  Q+A   F+ M R
Sbjct: 484 SKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVR 543

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               PN+VTY A+I A  K         E+F+ ML  G  P+ +T+ +L+    + G  E
Sbjct: 544 DGCAPNVVTYTALIHAYLKAR-KMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602

Query: 317 AARNLFNEMVHRG------------------IDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
            A  ++  M  RG                   D +IFTY  L+D +CK  ++  A +++ 
Sbjct: 603 KACQIYARM--RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
            M  +   PN + Y  +IDG+ K G+LD+A  +F++M   G G +  +Y++++    K  
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           R + AL V   M  +    + + Y  ++ G  K GK DE  R+   M+     PN++TY+
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYT 780

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
            +ID + K G   + +++ R+    G   + V Y  LI+  C  GL++ A  LLDEM + 
Sbjct: 781 AMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQT 840

Query: 539 GIRPNVVTYNSIIDAFGR 556
               ++  Y  +I+ F R
Sbjct: 841 YWPKHMAGYRKVIEGFNR 858



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 180/385 (46%), Gaps = 19/385 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    ++G +  A+  F+  + +G    V  ++ALI AY ++     A  +F  M  
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLS 578

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDR----------------I 300
               PN+VTY A+ID   K G   +   +I+  M  N   PD                  
Sbjct: 579 EGCIPNVVTYTALIDGHCKSG-QIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           T+ +L+    +    + AR+L + M   G + +   Y+ L+D  CK  ++D A  +  +M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
             +   PNV TYS++ID   K  RLD AL + S M       + + Y  ++    K+G+ 
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           +EA  +   ME  G   + VTY A++ G+GK GK D+   +  QM A   +PN +TY  L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I+     GL  +A Q+  E KQ      +  Y  +I+   +  ++  ++ LLDE+ +   
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVA 875

Query: 541 RPNVVTYNSIIDAFGRSATTECTVD 565
            P +  Y  +ID+F ++   E  ++
Sbjct: 876 VPIIPAYRILIDSFCKAGRLELALE 900



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 136/583 (23%), Positives = 257/583 (44%), Gaps = 45/583 (7%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS-----AMISILGRLGKVDLAKNIF 216
           L+R+    G W+ A++          R  D G   S     A++ +     ++D A  + 
Sbjct: 203 LIRKCCRNGLWNVALEELG-------RLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVH 255

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
               + G+    Y     +    ++G  +EA+++   +++   K + V Y  +I    + 
Sbjct: 256 REMSDSGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEA 312

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
            + F+  ++    M  +   P+ +T+  LL  C R       + + + M+  G       
Sbjct: 313 SL-FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRI 371

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD--DALNM--- 391
           +N+L+ A C+      A++++ +M      P  V Y+ +I G     +L   D L +   
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEK 431

Query: 392 -FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
            + EM    + L++V+ + +       G+FE+A  + +EM S G   D  TY+ ++G   
Sbjct: 432 AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
              K D    +FE+MK++ V P++ TY+ LID + K GL ++A + F E  + G   +VV
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y+ALI A  K   + SA  L + M  EG  PNVVTY ++ID   +S   E       R 
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK-KENRCRQEILCI 629
            G   +  ++D     DD ++++        I  +G LV       K KE R   +++ +
Sbjct: 612 RG-NADIPDVDMYFKIDDGNIRDPN------IFTYGALVDGLCKAHKVKEARDLLDVMSV 664

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL--RLFDNQVYGVAHGLLM 687
            G          +PN + + A+++   +    ++A M+  ++  R +   VY  +  +  
Sbjct: 665 EGC---------EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 688 GYRDNIWVQALSLFDEVKLMDSSTAS--AFYNALTDMLWHFGQ 728
            ++D     AL +    +++++S A     Y  + D L   G+
Sbjct: 716 LFKDKRLDLALKVLS--RMLENSCAPNVIIYTEMIDGLCKVGK 756



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 192/411 (46%), Gaps = 52/411 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I    +  K+  A  +FE  L+EG    V  ++ALI  + +SG  ++A  ++  M+ 
Sbjct: 554 TALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613

Query: 257 Y---------------NLK-PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
                           N++ PN+ TY A++D   K     K   ++ D M   G +P+ I
Sbjct: 614 NADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAH-KVKEARDLLDVMSVEGCEPNHI 672

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
            +++L+    + G  + A+ +F +M  RG   +++TY++L+D + K  ++DLA ++++ M
Sbjct: 673 VYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM 732

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
              + +PNV+ Y+ MIDG  K G+ D+A  + S M+  G   + V+Y  ++  + K G+ 
Sbjct: 733 LENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKV 792

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA------------- 467
           ++ L + ++M + G   + VTY  L+      G  D+  ++ ++MK              
Sbjct: 793 DKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKV 852

Query: 468 --------------------DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL-- 505
                               +   P +  Y  LID + K G  + A+++ +E        
Sbjct: 853 IEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYS 912

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            AD  LYS+LI++L     V+ A  L  +M K G  P +  +  ++    R
Sbjct: 913 AADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIR 963



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 167/404 (41%), Gaps = 47/404 (11%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G +  A++ +LG  G   + +       +E         + LI    R+G    A+    
Sbjct: 162 GPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELG 221

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
            +K    KP+ +TYNA++    +   +D  ++V    +M  +G   D  T    + +  +
Sbjct: 222 RLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVH--REMSDSGFNMDGYTLGCFVHLLCK 279

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            G W  A  L  +        D   Y  ++  +C+ +  + A + ++ M + +  PNVVT
Sbjct: 280 AGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVT 336

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y  ++ G  +  +L     + S M   G    R  +N+++  Y + G +  A  + K+M 
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396

Query: 432 SSGIRKDAVTYNALLGG-------------------YGKQ-------------------- 452
             G +   V YN L+GG                   YG+                     
Sbjct: 397 DCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLC 456

Query: 453 --GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
             GK+++   +  +M +    P+  TYS +I +         A  +F E K   +  DV 
Sbjct: 457 GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVF 516

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            Y+ LID+ CK GL++ A    DEM ++G  PNVVTY ++I A+
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAY 560



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 38/233 (16%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + MI  L ++GK D A  +      +G    V  ++A+I  +G++G   + + +   M
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802

Query: 255 KRYNLKPNLVTYNAVIDACGKGGV---------------------DFKHVVEIF------ 287
                 PN VTY  +I+ C   G+                      ++ V+E F      
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII 862

Query: 288 -----DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV----HRGIDQDIFTYN 338
                D++  N   P    +  L+    + G  E A  L  EM     +   D+D+  Y+
Sbjct: 863 SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDL--YS 920

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
           +L++++   +++D AFE+ A+M  +   P +  +  ++ G  +  R ++AL +
Sbjct: 921 SLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 158/297 (53%), Gaps = 1/297 (0%)

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           PN+ T+N VID   K G +      +F  M   G  PD +TFNSL+    + G  +    
Sbjct: 186 PNVFTFNIVIDFLCKEG-ELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L  EM   G   D+ TYN L++  CK  +M+ A+   A M  + +  NVVT+ST +D + 
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K G + +A+ +F++M+  G+ L+  +Y  ++    K GR ++A+++  EM   G+  + V
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY  L+ G  K+ K  E   +   M+   V  N L Y+TLI  +      ++A+ +  E 
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           K  GL+ D+ LY ALI  LC    ++ A SLL +M + G+ PN + Y +++DA  +S
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 204/406 (50%), Gaps = 7/406 (1%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           LL  L +RG    A++  A A  RE R     +  + ++  L R     L + +FE    
Sbjct: 128 LLSVLADRGLLDDAVR--AVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFE---- 181

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           +     V+ F+ +I    + G   EA S+F+ MK     P++VT+N++ID  GK G +  
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCG-ELD 240

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            V ++ ++M R+G + D +T+N+L+    + G  E A   F  M   G+  ++ T++T +
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFV 300

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           DA CK   +  A ++ A+M  + ++ N  TY+ +IDG  KAGRLDDA+ +  EM   G+ 
Sbjct: 301 DAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP 360

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
           L+ V+Y  ++    K  +  EA  V + ME +G+R + + Y  L+ G+      ++   +
Sbjct: 361 LNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGL 420

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
             +MK   +  ++  Y  LI          EA  +  +  ++GL+ + ++Y+ ++DA  K
Sbjct: 421 LSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFK 480

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           +G V  A+++L ++   G +PN    N  +  F        ++D V
Sbjct: 481 SGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKV 526



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 206/434 (47%), Gaps = 41/434 (9%)

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
           ++LL+V +  GL + A      +    +  +  T N +L  + +     L   +  ++PA
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA 185

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
               PNV T++ +ID   K G L +A ++FS MK +G   D V++N+++  Y K G  +E
Sbjct: 186 ----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
              + +EM  SG + D VTYNAL+  + K G+ +     F  MK + V  N++T+ST +D
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            + K GL +EAM++F + +  G+  +   Y+ LID  CK G ++ A+ LLDEM ++G+  
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL---------DAMCSQDDKDVQE 593
           NVVTY  ++D   +        +DV R + K    AN            M    +K +  
Sbjct: 362 NVVTYTVLVDGLCKERKVA-EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGL 420

Query: 594 AGRTDNQ----IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
                N+     I ++G L+       K +            +  KM +  ++PN + ++
Sbjct: 421 LSEMKNKGLELDISLYGALIQGLCNVHKLDE--------AKSLLTKMDESGLEPNYIIYT 472

Query: 650 AILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDN--IWVQALSLFDEVKLM 707
            +++AC +     +A  +L+  ++ D+           G++ N     +A+ LF+E+   
Sbjct: 473 TMMDACFKSGKVPEAIAMLQ--KILDS-----------GFQPNNGCLNEAVQLFNEMVHK 519

Query: 708 DSSTASAFYNALTD 721
             S     Y AL D
Sbjct: 520 GMSLDKVVYTALLD 533



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 208/451 (46%), Gaps = 39/451 (8%)

Query: 130 HHVTAFARDDVSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREE 187
           H +   ARD    G ++++   +L   + +TF  ++  L   GE ++A   F+       
Sbjct: 162 HILLRLARDRS--GRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFS------- 212

Query: 188 RKNDQGKLA-----SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSG 242
           R  + G L      +++I   G+ G++D  + + E     G    V  ++ALI+ + + G
Sbjct: 213 RMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFG 272

Query: 243 YCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITF 302
             + A   F +MKR  +  N+VT++  +DA  K G+  +  +++F  M   G+  +  T+
Sbjct: 273 RMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL-VREAMKLFAQMRVRGMALNEFTY 331

Query: 303 NSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
             L+    + G  + A  L +EMV +G+  ++ TY  L+D +CK  ++  A +++  M  
Sbjct: 332 TCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEK 391

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
             +  N + Y+T+I G+      + AL + SEMK  G+ LD   Y  ++     + + +E
Sbjct: 392 AGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDE 451

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGK----------------------YDEVRR 460
           A  +  +M+ SG+  + + Y  ++    K GK                       +E  +
Sbjct: 452 AKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQ 511

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F +M    +S + + Y+ L+D Y K G   +A  +  +   +GL+ D+  Y+  I   C
Sbjct: 512 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 571

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
              ++  A  +  EM   GI P+   YN +I
Sbjct: 572 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 602



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 85/192 (44%), Gaps = 14/192 (7%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDF 280
           N+G    +  + ALI          EA S+   M    L+PN + Y  ++DAC K G   
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSG-KV 484

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
              + +   +L +G QP+              G    A  LFNEMVH+G+  D   Y  L
Sbjct: 485 PEAIAMLQKILDSGFQPN-------------NGCLNEAVQLFNEMVHKGMSLDKVVYTAL 531

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           LD   K   +  AF + A+M    +  ++  Y+  I G+     + +A  +FSEM   GI
Sbjct: 532 LDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGI 591

Query: 401 GLDRVSYNTVLS 412
             DR  YN +++
Sbjct: 592 APDRAVYNCLIT 603


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 185/365 (50%), Gaps = 4/365 (1%)

Query: 190 NDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS 249
           +D   L SA+  +    G +    ++   AL  G    + A+S L++   R     EA +
Sbjct: 44  DDPAPLVSAVAKVYADEGLLPDGCSLLLLALRRGIRVPMPAWSDLMN---RLPSVPEAYA 100

Query: 250 VFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC 309
            +  +    + P    +N ++    + G        +FD+MLR GVQP  +TFN+L++  
Sbjct: 101 FYLHLLDAGVPPEARQFNMLMRDMIRSG-KLASARNVFDEMLRRGVQPTVVTFNTLMSGM 159

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
            +      A  L   M   GI  D++TY   +  +CK  ++  A E+  EM  + ++PN 
Sbjct: 160 CKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNT 219

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           V  +T+ID + K G +   L +  EM   G+  D V+YN +++ + ++   + A  + +E
Sbjct: 220 VVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEE 279

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M   G++ D VTY  L+ G  K+G+ D    M ++M  + V+ + +TY+ LI   SK G 
Sbjct: 280 MRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGR 339

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
             +A +I  E  +AGL+ D   Y+ +IDA CKNG V++    L EM  +G  P +VTYN 
Sbjct: 340 SVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNV 399

Query: 550 IIDAF 554
           +++ F
Sbjct: 400 VMNGF 404



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 176/352 (50%), Gaps = 1/352 (0%)

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
           ++ RL  V  A   +   L+ G       F+ L+    RSG    A +VF+ M R  ++P
Sbjct: 88  LMNRLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQP 147

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
            +VT+N ++    K   D  +   +   M + G+ PD  T+ + +    + G  + A  +
Sbjct: 148 TVVTFNTLMSGMCKAS-DLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEM 206

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F EM  RG++ +     TL+DA CK   +    E+  EM  + +  ++V Y+ +++G+ +
Sbjct: 207 FEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCR 266

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
              +  A ++  EM+  G+  D+V+Y T++    K G  + A+ + +EM   G+  D VT
Sbjct: 267 VRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVT 326

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y AL+ G  K G+  +  R+  +M    + P+  TY+ +ID + K G  K   +  +E +
Sbjct: 327 YTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQ 386

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             G    +V Y+ +++  C  G +++A  LL+ M   G+ PN +TYN ++D 
Sbjct: 387 NKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDG 438



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 175/350 (50%), Gaps = 4/350 (1%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R GK+  A+N+F+  L  G   TV  F+ L+S   ++     A ++   M +  + P++ 
Sbjct: 126 RSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVY 185

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TY A I    K G   +  +E+F++M   G+ P+ +   +L+    + G   A   L  E
Sbjct: 186 TYGAFIQGLCKTG-RIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWE 244

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M  RG+  D+  YN L++  C+   M  A +I+ EM    + P+ VTY+T+IDG  K G 
Sbjct: 245 MATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGE 304

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD A+ M  EM   G+ LD V+Y  ++S  +K GR  +A  +  EM  +G++ D  TY  
Sbjct: 305 LDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTM 364

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++  + K G      +  ++M+    +P ++TY+ +++ +   G  K A  +       G
Sbjct: 365 VIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIG 424

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +  + + Y+ L+D  CK+G V     L    + +G+  +   Y S+I+ F
Sbjct: 425 VCPNDITYNILLDGHCKHGKVRDTEEL---KSAKGMVSDFGVYTSLINEF 471



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 171/385 (44%), Gaps = 72/385 (18%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           +L  GV P+   FN L+    R G   +ARN+F+EM+ RG+   + T+NTL+  +CK + 
Sbjct: 105 LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD 164

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++ A  +   M    I+P+V TY   I G  K GR+ DA+ MF EM   G+  + V   T
Sbjct: 165 LNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTT 224

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++  + K G     L +  EM + G++ D V YNAL+ G+ +      VR M        
Sbjct: 225 LIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCR------VRDM-------- 270

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
                                K A  I  E ++ GLK D V Y+ LID  CK G +++A+
Sbjct: 271 ---------------------KAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAM 309

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            +  EM+ EG+  + VTY ++I    ++  +     D ER L            C   + 
Sbjct: 310 EMKQEMSDEGVALDDVTYTALISGLSKAGRSV----DAERIL------------CEMMEA 353

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK---PNVV 646
            +Q    T   +I  F +    K G                  F+ + +++ K   P +V
Sbjct: 354 GLQPDNTTYTMVIDAFCKNGDVKTG------------------FKHLKEMQNKGKNPGIV 395

Query: 647 TFSAILNACSRCNSFEDASMLLEEL 671
           T++ ++N        ++A MLL  +
Sbjct: 396 TYNVVMNGFCSLGQMKNADMLLNAM 420



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 39/67 (58%)

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA   +     AG+  +   ++ L+  + ++G + SA ++ DEM + G++P VVT+N+++
Sbjct: 97  EAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLM 156

Query: 552 DAFGRSA 558
               +++
Sbjct: 157 SGMCKAS 163


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 180/334 (53%), Gaps = 1/334 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    V  ++ LI    ++G    A ++F  M R  L PN  TY+ +++   K G+  + 
Sbjct: 188 GLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQ-RE 246

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             +++++M R+G+ P+   +N L++     G+ + A  +F EM  +GI   + TYN L+ 
Sbjct: 247 GFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIG 306

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            +C+G +   A +++ ++    +SPN+VTY+ +I+G+   G++D A+ +F+++K  G+  
Sbjct: 307 GLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSP 366

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
             V+YNT+++ Y+K+     AL + KEME   I +  VTY  L+  + +    D+   M 
Sbjct: 367 TLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMH 426

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
             M+   + P++ TYS LI      G  KEA + F+   +  L+ + V+Y+ +I   CK 
Sbjct: 427 SLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKE 486

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           G    A+ LL+EM   G+ PNV ++ S +    R
Sbjct: 487 GSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCR 520



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 174/332 (52%), Gaps = 1/332 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y+F  +I+    +GY      +   ++ + L PN+V Y  +ID C K G D      +F 
Sbjct: 159 YSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNG-DVMLAKNLFC 217

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M R G+ P++ T++ L+    + GL      ++  M   GI  + + YN L+   C   
Sbjct: 218 KMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDG 277

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            +D AF++ AEM  K I+  V+TY+ +I G  +  +  +A+ +  ++  +G+  + V+YN
Sbjct: 278 MVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYN 337

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +++ +  +G+ + A+ +  +++SSG+    VTYN L+ GY K         + ++M+  
Sbjct: 338 ILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 397

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
           C++ + +TY+ LID +++     +A ++    +++GL  DV  YS LI   C NG ++ A
Sbjct: 398 CIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEA 457

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
                 + +  ++PN V YN++I  + +  ++
Sbjct: 458 SKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSS 489



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 176/345 (51%), Gaps = 3/345 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G V LAKN+F      G     + +S L++ + + G  +E   ++ +M R  + PN   Y
Sbjct: 207 GDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAY 266

Query: 267 NAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +I + C  G VD     ++F +M   G+    +T+N L+    RG  +  A  L +++
Sbjct: 267 NCLISEYCNDGMVD--KAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV 324

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              G+  +I TYN L++  C   +MD A  +  ++ +  +SP +VTY+T+I GY+K   L
Sbjct: 325 NKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENL 384

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             AL++  EM+   I   +V+Y  ++  +A+L   ++A  +   ME SG+  D  TY+ L
Sbjct: 385 AGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVL 444

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G    G   E  + F+ +    + PN + Y+T+I  Y K G    A+++  E   +G+
Sbjct: 445 IHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGM 504

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             +V  + + +  LC++   + A  LL +M   G++P+V  Y  +
Sbjct: 505 VPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 204/455 (44%), Gaps = 26/455 (5%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           + A+++AY  S    +A++  + M      P   T+N ++    +    F     IF+ +
Sbjct: 92  YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNY-FDKAWWIFN-V 149

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           L++ V  +  +F  ++  C   G +     L   +   G+  ++  Y TL+D  CK   +
Sbjct: 150 LKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDV 209

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
            LA  +  +M    + PN  TYS +++G+ K G   +   M+  M   GI  +  +YN +
Sbjct: 210 MLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCL 269

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +S Y   G  ++A  V  EM   GI    +TYN L+GG  +  K+ E  ++  ++    +
Sbjct: 270 ISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           SPN++TY+ LI+ +   G    A+++F + K +GL   +V Y+ LI    K   +  A+ 
Sbjct: 330 SPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTE--CTVDDVERDLGKQKE----SANLDAMC 584
           L+ EM +  I  + VTY  +IDAF R   T+  C +  +    G   +    S  +   C
Sbjct: 390 LVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXC 449

Query: 585 --------SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
                   S+  K + E     N +I  +  ++     +G      R        +  +M
Sbjct: 450 VNGNMKEASKPFKSLGEMHLQPNSVI--YNTMIHGYCKEGSSYRALR--------LLNEM 499

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               + PNV +F + +    R   +++A +LL ++
Sbjct: 500 VHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQM 534



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 2/153 (1%)

Query: 186 EERKNDQGKLA-SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
           EER   + K+  + +I    RL   D A  +       G    VY +S LI     +G  
Sbjct: 395 EERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNM 454

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           +EA   F S+   +L+PN V YN +I    K G  ++  + + ++M+ +G+ P+  +F S
Sbjct: 455 KEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYR-ALRLLNEMVHSGMVPNVASFCS 513

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            + +  R   W+ A  L  +M++ G+   +  Y
Sbjct: 514 TMGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 221/484 (45%), Gaps = 16/484 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    R G++D A    +         TVY +++LI+ Y + G    A   F+ M  
Sbjct: 231 SILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMID 290

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             L P +VTY ++I   C +G  ++    +++++M   G+ P+  TF ++++   R  + 
Sbjct: 291 KGLTPTVVTYTSLISGYCNEG--EWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMM 348

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  LF EM  R I     TYN +++  C+   +  AF ++ EM  K   P+  TY  +
Sbjct: 349 AEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPL 408

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G    GR+ +A     ++      L+ + Y+ ++  Y K GRF++A+  C+ M   G+
Sbjct: 409 ISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGV 468

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D V Y  L+ G  ++     +  + ++M    + P+ + Y+ +ID +SK G  KEA  
Sbjct: 469 AMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFG 528

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           ++      G   +VV Y+ALI+ LCK GL++ A  L  E     + PN +TY   +D   
Sbjct: 529 LWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLT 588

Query: 556 RSATTECTVD---DVERDLGKQKESANLDAMCSQDDKDVQEA-----GRTDNQIIKVFGQ 607
           R    E  V     + +       S N+          ++EA     G TDN I+  +  
Sbjct: 589 RGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYIT 648

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
                  Q K+ N   QE    + ++  M    +KP+ + +S +++ C      E A  L
Sbjct: 649 YSTIIYEQCKRSN--LQE---AIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFEL 703

Query: 668 LEEL 671
            +E+
Sbjct: 704 RDEM 707



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 182/358 (50%), Gaps = 1/358 (0%)

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           +++   GK + A+ +F+    +G       +S LI ++ R G    AI   + M + +++
Sbjct: 200 NVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIE 259

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
             +  YN++I+   K G +       FD+M+  G+ P  +T+ SL++     G W  A  
Sbjct: 260 FTVYPYNSLINGYCKLG-NASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFK 318

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           ++NEM  +GI  + +T+  ++  +C+   M  A  +  EM  + I P+ VTY+ MI+G+ 
Sbjct: 319 VYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHC 378

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           ++G + +A ++  EM   G   D  +Y  ++S    +GR  EA     ++     + + +
Sbjct: 379 RSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNM 438

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
            Y+AL+ GY K+G++ +       M    V+ +L+ Y+ LID  ++    +    + +E 
Sbjct: 439 CYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEM 498

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
              GL+ D V+Y+ +ID   K G ++ A  L D M  EG  PNVVTY ++I+   ++ 
Sbjct: 499 HNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAG 556



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 218/450 (48%), Gaps = 32/450 (7%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V   SAL++   R     + + +F+ +   N++P++  Y+AV+ +  +   DF    E+ 
Sbjct: 96  VRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELK-DFNKAKEMI 154

Query: 288 DDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             M  N  +   + +N L+  +C    +WEA   + N ++ +G++ ++ TY        K
Sbjct: 155 HWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALE-IKNCLMQKGLEANVVTYYG------K 207

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             + +L F+   EM  K +  N +TYS +ID + + G +D+A+    +M    I      
Sbjct: 208 FNEAELLFK---EMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYP 264

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN++++ Y KLG    A     EM   G+    VTY +L+ GY  +G++ +  +++ +M 
Sbjct: 265 YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT 324

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           A  +SPN  T++ +I    +  +  EA+++F E K+  +    V Y+ +I+  C++G + 
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNIS 384

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVERD---LGKQKESANL 580
            A  LLDEM  +G  P+  TY  +I      GR +  +  VDD+ +D   L     SA +
Sbjct: 385 EAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALV 444

Query: 581 DAMCSQDD-KDVQEAGRTDNQI-----IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
              C +   KD   A R   +      +  +  L+   A    +E+  R     + G+ +
Sbjct: 445 HGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTA----REHDTRA----LFGLLK 496

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           +MH   ++P+ V ++ +++  S+  + ++A
Sbjct: 497 EMHNHGLRPDAVIYTNMIDRHSKAGNLKEA 526



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 181/419 (43%), Gaps = 70/419 (16%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++IS     G+   A  ++     +G     Y F+A+IS   R+    EAI +F  MK 
Sbjct: 301 TSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKE 360

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLW 315
             + P+ VTYN +I+   + G +      + D+M+  G  PD  T+  L++ +CS G + 
Sbjct: 361 RKIMPSEVTYNVMIEGHCRSG-NISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVS 419

Query: 316 EA----------------------------------ARNLFNEMVHRGIDQDIFTYNTLL 341
           EA                                  A +    MV RG+  D+  Y  L+
Sbjct: 420 EAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILI 479

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           D   +       F ++ EM    + P+ V Y+ MID ++KAG L +A  ++  M   G  
Sbjct: 480 DGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCL 539

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKE-------------------------MESS--- 433
            + V+Y  +++   K G  ++A L+ KE                         ME +   
Sbjct: 540 PNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQL 599

Query: 434 ------GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
                 G     V+YN L+ G+ + GK +E  ++   M  + + P+ +TYST+I    K 
Sbjct: 600 HHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKR 659

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
              +EA++++      GLK D + YS L+   C  G +E A  L DEM + G+R N VT
Sbjct: 660 SNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 121/508 (23%), Positives = 230/508 (45%), Gaps = 36/508 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+++ L R  + +    +F+  ++      +Y +SA++ +        +A  + + M+ 
Sbjct: 100 SALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEF 159

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              K ++V YN +I    K    ++  +EI + +++ G++ + +T+          G + 
Sbjct: 160 NQCKLSIVVYNVLIHGLCKSRRIWE-ALEIKNCLMQKGLEANVVTYY---------GKFN 209

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF EM  +G+  +  TY+ L+D+ C+  +MD A   + +M   +I   V  Y+++I
Sbjct: 210 EAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLI 269

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY K G    A   F EM   G+    V+Y +++S Y   G + +A  V  EM + GI 
Sbjct: 270 NGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGIS 329

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +  T+ A++ G  +     E  R+F +MK   + P+ +TY+ +I+ + + G   EA  +
Sbjct: 330 PNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHL 389

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF-- 554
             E    G   D   Y  LI  LC  G V  A   +D++ K+  + N + Y++++  +  
Sbjct: 390 LDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCK 449

Query: 555 -GR--SATTECTVDDVERDLGKQK--ESANLDAMCSQDD--------KDVQEAGRTDNQI 601
            GR   A + C V  VER +       +  +D    + D        K++   G   + +
Sbjct: 450 EGRFKDAVSACRV-MVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAV 508

Query: 602 IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSF 661
           I         KAG  K+            G++  M      PNVVT++A++N   +    
Sbjct: 509 IYTNMIDRHSKAGNLKEA----------FGLWDIMVDEGCLPNVVTYTALINGLCKAGLM 558

Query: 662 EDASMLLEELRLFDNQVYGVAHGLLMGY 689
           + A +L +E  + D     + +G  + +
Sbjct: 559 DKAELLSKETLVSDVTPNHITYGCFLDH 586



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 151/305 (49%), Gaps = 10/305 (3%)

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           MK  NL P + T +A+++   +    F  V+ +FDD++   VQPD   +++++       
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFR-RFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELK 145

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
            +  A+ + + M        I  YN L+  +CK  ++  A EI   +  K +  NVVTY 
Sbjct: 146 DFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY- 204

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
                    G+ ++A  +F EM   G+  + ++Y+ ++  + + G  + A+    +M  +
Sbjct: 205 --------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKA 256

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            I      YN+L+ GY K G     +  F++M    ++P ++TY++LI  Y   G + +A
Sbjct: 257 SIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKA 316

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            +++ E    G+  +   ++A+I  LC+  ++  A+ L  EM +  I P+ VTYN +I+ 
Sbjct: 317 FKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEG 376

Query: 554 FGRSA 558
             RS 
Sbjct: 377 HCRSG 381



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 141/316 (44%), Gaps = 48/316 (15%)

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M   N+ P V T S +++G  +  R +D L +F ++    +  D   Y+ V+    +L  
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
           F +A  +   ME +  +   V YN L+ G  K       RR++E ++   +   L+    
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKS------RRIWEALE---IKNCLMQKGL 197

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
             +V +  G + EA  +F+E  + GL A+ + YS LID+ C+ G +++A+  LD+MTK  
Sbjct: 198 EANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKAS 257

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-LDAMCSQDDKDVQEAGRTD 598
           I   V  YNS+I+ + +              LG    +    D M    DK +       
Sbjct: 258 IEFTVYPYNSLINGYCK--------------LGNASAAKYYFDEMI---DKGLTPT---- 296

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
              +  +  L++    +G+     +        V+ +M    I PN  TF+AI++   R 
Sbjct: 297 ---VVTYTSLISGYCNEGEWHKAFK--------VYNEMTAKGISPNTYTFTAIISGLCR- 344

Query: 659 NSFEDASMLLEELRLF 674
                A+M+ E +RLF
Sbjct: 345 -----ANMMAEAIRLF 355


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 186/370 (50%), Gaps = 9/370 (2%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+ L  + +++         +  GY   V  F+ LI          EA  +F  M++  
Sbjct: 132 LINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLG 191

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRN------GVQPDRITFNSLLAVCSR 311
             PN+VTY  +I   C  G ++    ++   +ML +        +P+ I+++ ++    +
Sbjct: 192 CTPNVVTYGTLIKGLCALGNINI--ALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCK 249

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            G WE A  LFNEMV +G+  ++ T++ L+D +CK  Q+  A +++  M    I PN+ T
Sbjct: 250 VGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFT 309

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+++I G+   G L+ A  +F  M   G   D +SYN +++ Y K  + EEA+ +  EM 
Sbjct: 310 YTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEML 369

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             G+  D  T   LL      GK D+ + +F  +K   +  +L      +D   K G   
Sbjct: 370 HVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIF 429

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EAM++F E +   +K D+  +  LID LCK G +E+A  L +++ +EGI+P+ + Y+S+I
Sbjct: 430 EAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMI 489

Query: 552 DAFGRSATTE 561
             F +    +
Sbjct: 490 HGFCKKGQVD 499



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 174/317 (54%), Gaps = 1/317 (0%)

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           +N +PN+++Y+ +ID   K G +++  + +F++M+  GVQP+ +TF+ L+ +  + G   
Sbjct: 231 FNCRPNVISYSIIIDGLCKVG-NWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVI 289

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A+ L   M+  GI  ++FTY +L+   C    ++ A E+   MP+K   P+V++Y+ +I
Sbjct: 290 KAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLI 349

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +GY K  ++++A+ +F+EM  +G+  D  +   +L      G+ ++A  + + ++   + 
Sbjct: 350 NGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMP 409

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
           KD       L G  K G   E  ++F ++++  +  ++ T+  LID   K G  + A ++
Sbjct: 410 KDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWEL 469

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F +  + G++ D + YS++I   CK G V+ A  L  +M + G  P+++TY+ ++  F  
Sbjct: 470 FEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYE 529

Query: 557 SATTECTVDDVERDLGK 573
           S   E  V  + R + K
Sbjct: 530 SNKLEKVVQLLHRMIEK 546



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 189/379 (49%), Gaps = 9/379 (2%)

Query: 198 AMISILGRLGKVDLAKNIFETALNE------GYGNTVYAFSALISAYGRSGYCQEAISVF 251
            +I  L  LG +++A    +  LN+           V ++S +I    + G  +EAI +F
Sbjct: 201 TLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLF 260

Query: 252 NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCS 310
           N M    ++PN+VT++ +ID   K G   K   ++ + M++ G+ P+  T+ SL+   C 
Sbjct: 261 NEMVDQGVQPNVVTFSVLIDMLCKEGQVIK-AKKLLEMMIQIGIVPNLFTYTSLIKGFCL 319

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
            G L  +A+ LF  M  +G + D+ +YN L++  CK  +++ A ++  EM    + P+V 
Sbjct: 320 VGDL-NSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVK 378

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           T   ++     AG++DDA  +F  +K   +  D       L    K G   EA+ +  E+
Sbjct: 379 TSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNEL 438

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           ES  ++ D  T+  L+ G  K GK +    +FE++  + + P+ + YS++I  + K G  
Sbjct: 439 ESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQV 498

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            +A  +F++ ++ G   D++ YS L+    ++  +E  V LL  M ++ + P+   Y  +
Sbjct: 499 DKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIV 558

Query: 551 IDAFGRSATTECTVDDVER 569
            D   +    +  +D ++R
Sbjct: 559 EDMVCKDEKYKEWLDLLQR 577



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 119/496 (23%), Positives = 221/496 (44%), Gaps = 79/496 (15%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
           ++++F+ L++   +  +  +  S++  M    L P+L+T N +I+  C    ++    + 
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRIN--EGLA 147

Query: 286 IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
               ++R G  PD +TF +L+  +C    + EA + LF  M   G   ++ TY TL+  +
Sbjct: 148 AMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATK-LFMRMQKLGCTPNVVTYGTLIKGL 206

Query: 345 CKGAQMDLAFEIMAEMP------AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           C    +++A +   EM         N  PNV++YS +IDG  K G  ++A+ +F+EM   
Sbjct: 207 CALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQ 266

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  + V+++ ++ +  K G+  +A  + + M   GI  +  TY +L+ G+   G  +  
Sbjct: 267 GVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSA 326

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV----VLYSA 514
           + +F  M +    P++++Y+ LI+ Y K    +EAM++F E    G+  DV    VL  A
Sbjct: 327 KELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKA 386

Query: 515 L-------------------------------IDALCKNGLVESAVSLLDEMTKEGIRPN 543
           L                               +D LCKNG +  A+ L +E+    ++ +
Sbjct: 387 LFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLD 446

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           + T+  +ID   ++   E   +  E+     +E    DAM               + +I 
Sbjct: 447 IETFGCLIDGLCKAGKLETAWELFEK---LYEEGIQPDAM-------------AYSSMIH 490

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
            F      K GQ  K N           +FQKM +    P+++T+S ++      N  E 
Sbjct: 491 GFC-----KKGQVDKANI----------LFQKMEENGCSPDLITYSILMRGFYESNKLEK 535

Query: 664 ASMLLEELRLFDNQVY 679
              LL   R+ +  V+
Sbjct: 536 VVQLLH--RMIEKDVW 549



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 172/337 (51%), Gaps = 3/337 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L ++G  + A  +F   +++G    V  FS LI    + G   +A  +   M +
Sbjct: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQ 300

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + PNL TY ++I   C  G  D     E+F  M   G +PD I++N L+    +    
Sbjct: 301 IGIVPNLFTYTSLIKGFCLVG--DLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKV 358

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  LFNEM+H G+  D+ T   LL A+    ++D A E+   +    +  ++      
Sbjct: 359 EEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIF 418

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +DG  K G + +A+ +F+E++   + LD  ++  ++    K G+ E A  + +++   GI
Sbjct: 419 LDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGI 478

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + DA+ Y++++ G+ K+G+ D+   +F++M+ +  SP+L+TYS L+  + +    ++ +Q
Sbjct: 479 QPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQ 538

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           +     +  +  D  +Y+ + D +CK+   +  + LL
Sbjct: 539 LLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLL 575



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 176/342 (51%), Gaps = 3/342 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ ++  L   G W +AI  F   V +  + N      S +I +L + G+V  AK + E 
Sbjct: 240 YSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVT--FSVLIDMLCKEGQVIKAKKLLEM 297

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +  G    ++ +++LI  +   G    A  +F SM     +P++++YN +I+   K  +
Sbjct: 298 MIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKT-L 356

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +  +++F++ML  G+ PD  T   LL      G  + A+ LF  +    + +D+    
Sbjct: 357 KVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICC 416

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
             LD +CK   +  A ++  E+ + N+  ++ T+  +IDG  KAG+L+ A  +F ++   
Sbjct: 417 IFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEE 476

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           GI  D ++Y++++  + K G+ ++A ++ ++ME +G   D +TY+ L+ G+ +  K ++V
Sbjct: 477 GIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKV 536

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
            ++  +M    V P+   Y+ + D+  K   YKE + + + F
Sbjct: 537 VQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRF 578



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 112/488 (22%), Positives = 214/488 (43%), Gaps = 82/488 (16%)

Query: 248 ISVFNSMKRYNLKPNLVTYN----AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
           IS  N+ K  +  P  +++       +  C  G +      + FD M+R+       +FN
Sbjct: 41  ISSANNPKSLHASPERISFQHGIPMFLHKCKTGSISVTQAHQFFDLMMRS-----IFSFN 95

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
            LLA  ++   +    +L+ +M   G+  D+ T N L++ +C   +++     MA +  +
Sbjct: 96  RLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRR 155

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI------------GL--------- 402
              P+VVT++T+I G     R+ +A  +F  M+ LG             GL         
Sbjct: 156 GYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIA 215

Query: 403 --------------------DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
                               + +SY+ ++    K+G +EEA+ +  EM   G++ + VT+
Sbjct: 216 LKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTF 275

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           + L+    K+G+  + +++ E M    + PNL TY++LI  +   G    A ++F     
Sbjct: 276 SVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPS 335

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
            G + DV+ Y+ LI+  CK   VE A+ L +EM   G+ P+V T   ++ A   +     
Sbjct: 336 KGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAG---- 391

Query: 563 TVDDVERDLGKQKESAN----------LDAMCSQDDKDVQEAGRTDNQI--------IKV 604
            VDD +      K  A           LD +C   +  + EA +  N++        I+ 
Sbjct: 392 KVDDAKELFRVIKPYAMPKDLCICCIFLDGLCK--NGYIFEAMKLFNELESYNMKLDIET 449

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           FG L+      GK E            +F+K+++  I+P+ + +S++++   +    + A
Sbjct: 450 FGCLIDGLCKAGKLETAWE--------LFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKA 501

Query: 665 SMLLEELR 672
           ++L +++ 
Sbjct: 502 NILFQKME 509


>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Brachypodium distachyon]
          Length = 637

 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 148/560 (26%), Positives = 246/560 (43%), Gaps = 43/560 (7%)

Query: 31  HRQSHHPSSRPHWTSHKVSLTKPPLSPSP----RNAPKPAATSTTVAPNPKPFHSLSPLP 86
           H    HP  R H       + + P SPSP     +  +    + T +   +   +LSP P
Sbjct: 38  HDPRGHPLPRRHLICAAARILRSPASPSPLADLADYLRSLRLTLTASEASEVVKALSPDP 97

Query: 87  SSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVSLGDI- 145
           +         +            + R  +A+  R      EAL  V    RD V+ G+I 
Sbjct: 98  ALALAFFRFAAASLPGFRHDAFSYNR-ILALLFRSKADPGEALRLVAQMERDGVA-GNIS 155

Query: 146 ---------------------LKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVK 184
                                 KK+  +L G      +   L +R E SK  + +     
Sbjct: 156 TVNLLVGMGGGGVEVARCLELAKKWGLRLNGYTYKCIVQAHLRSR-EVSKGFEVY----- 209

Query: 185 REERKNDQGKL----ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
            EE      KL     + ++  L + G VD A  +FE    +      Y ++ LI   G+
Sbjct: 210 -EEMHRKGYKLDIFAYNMLLDALAKAGMVDQAYQVFEDMKQKYCVPDAYTYTILIRMSGK 268

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
           +G   + +S F+ M       NL+ YN VI+A GK  +  K V+ +   M+ +  QP++ 
Sbjct: 269 TGQTYKFLSFFDEMVSRGCALNLIAYNTVIEALGKNKMVDK-VIFVLSKMIESDCQPNQF 327

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           T++  L + +  G       +  ++  R +++ I++Y  L+ ++CK      A  +   M
Sbjct: 328 TYSLTLDILATEGQLHRLNEVL-DICDRYLNKSIYSY--LVKSLCKSGHASEAHNVFCRM 384

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
              + S +   + +M++    +G+  +A+++   M   GI  D   YN V S   KL + 
Sbjct: 385 WNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQV 444

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
                +  +M++SGI  D  TYN ++  YG+ G  D+   +FE+M+A    P+++TY+TL
Sbjct: 445 SFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTL 504

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I+   K G   EA  +F+E ++ G   DV  YS LI+   K+  V+ A SL DEM  EG 
Sbjct: 505 INCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGC 564

Query: 541 RPNVVTYNSIIDAFGRSATT 560
            PN+VTYN ++D   R   T
Sbjct: 565 IPNIVTYNILLDCLERRGKT 584



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 198/461 (42%), Gaps = 99/461 (21%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y +  ++ A+ RS    +   V+  M R   K ++  YN ++DA  K G+      ++F+
Sbjct: 187 YTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGM-VDQAYQVFE 245

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           DM +    PD  T+  L+ +  + G      + F+EMV RG   ++  YNT+++A+ K  
Sbjct: 246 DMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEALGKNK 305

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL----------------------- 385
            +D    ++++M   +  PN  TYS  +D  A  G+L                       
Sbjct: 306 MVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEVLDICDRYLNKSIYSYLV 365

Query: 386 ---------DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
                     +A N+F  M       DR ++ ++L +    G+  EA+ +   M   GI 
Sbjct: 366 KSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPEKGID 425

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D   YN +    GK  +   +  +F++MKA  ++P+L TY+ +I  Y + GL  +A  +
Sbjct: 426 TDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDKASGL 485

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F E + +  K DV+ Y+ LI+ L KNG ++ A  L  EM ++G  P+V TY+++I+ FG+
Sbjct: 486 FEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGK 545

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
           S                      +D  CS                  +F +++AE     
Sbjct: 546 SN--------------------KVDMACS------------------LFDEMIAEG---- 563

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
                      CI             PN+VT++ +L+   R
Sbjct: 564 -----------CI-------------PNIVTYNILLDCLER 580



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 174/388 (44%), Gaps = 33/388 (8%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL  L   G   +A Q   F   +++         + +I + G+ G+     + F+ 
Sbjct: 224 YNMLLDALAKAGMVDQAYQ--VFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDE 281

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            ++ G    + A++ +I A G++    + I V + M   + +PN  TY+  +D     G 
Sbjct: 282 MVSRGCALNLIAYNTVIEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQ 341

Query: 279 --DFKHVVEIFDDMLRNGVQP-----------------------------DRITFNSLLA 307
                 V++I D  L   +                               DR  F S+L 
Sbjct: 342 LHRLNEVLDICDRYLNKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLE 401

Query: 308 VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
           V    G    A +L + M  +GID DI  YN +  A+ K  Q+     +  +M A  I+P
Sbjct: 402 VLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAP 461

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           ++ TY+ MI  Y + G +D A  +F EM+      D ++YNT+++   K G  +EA ++ 
Sbjct: 462 DLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILF 521

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           KEM+  G   D  TY+ L+  +GK  K D    +F++M A+   PN++TY+ L+D   + 
Sbjct: 522 KEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCLERR 581

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSAL 515
           G   EA + +   KQ GL  D + YS L
Sbjct: 582 GKTAEAHKHYETMKQQGLTPDSITYSIL 609



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 95/444 (21%), Positives = 182/444 (40%), Gaps = 35/444 (7%)

Query: 329 GIDQDIFTYNTLLDAICKG-AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           G   D F+YN +L  + +  A    A  ++A+M    ++ N+ T + ++        +  
Sbjct: 113 GFRHDAFSYNRILALLFRSKADPGEALRLVAQMERDGVAGNISTVNLLVGMGGGGVEVAR 172

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
            L +    K  G+ L+  +Y  ++  + +     +   V +EM   G + D   YN LL 
Sbjct: 173 CLEL---AKKWGLRLNGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLD 229

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
              K G  D+  ++FE MK     P+  TY+ LI +  K G   + +  F E    G   
Sbjct: 230 ALAKAGMVDQAYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCAL 289

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTV 564
           +++ Y+ +I+AL KN +V+  + +L +M +   +PN  TY+  +D     G+       +
Sbjct: 290 NLIAYNTVIEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEVL 349

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
           D  +R L K   S  + ++C         A    N    VF ++        +       
Sbjct: 350 DICDRYLNKSIYSYLVKSLCKSG-----HASEAHN----VFCRMWNSHESGDRDAFISML 400

Query: 625 EILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----- 672
           E+LC  G       +   M +  I  ++  ++ + +A  +       S L ++++     
Sbjct: 401 EVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIA 460

Query: 673 --LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKR 730
             LF   +   ++G     R  +  +A  LF+E++          YN L + L   G   
Sbjct: 461 PDLFTYNIMISSYG-----RVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLD 515

Query: 731 GAQLVVLEGKRRQVWENVWSESCL 754
            A ++  E + +    +V++ S L
Sbjct: 516 EAHILFKEMQEKGYDPDVFTYSTL 539


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 185/358 (51%), Gaps = 6/358 (1%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
            +VD A  +       G    V  +S+L+  Y +SG  ++   VF  M    ++P++V Y
Sbjct: 164 AEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMY 223

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEM 325
             +ID+  K G   K    + D M+R G++P+ +T+N L+  +C  G + EA   +  +M
Sbjct: 224 TGLIDSLCKVG-KAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAI-GVLKKM 281

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP-AKNI-SPNVVTYSTMIDGYAKAG 383
             +G+  D+ TYNTL+  +    +MD A  ++ EM   KNI  PNVVT++++I G    G
Sbjct: 282 SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIG 341

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           R+  A  + + M+  G  ++ V+YN ++    ++ +  +A+ +  EM S G+  D+ TY+
Sbjct: 342 RMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYS 401

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+ G+ K  + D    +   M+   + P L  Y  L+    + G+ + A  +F E    
Sbjct: 402 ILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN- 460

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
               DVV YS +I   CK G +++A  LL  +  EG+ P+ VTY+ +I+ F +S   E
Sbjct: 461 NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDME 518



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 216/464 (46%), Gaps = 37/464 (7%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMK---RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
           +++ +++A  R G+   A ++  +M        +PN V+Y  ++ A C     D    V 
Sbjct: 79  SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLAD--QAVG 136

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +   M   GV+ D +T+ +L+         + A  L  EM   GI+ ++  Y++LL   C
Sbjct: 137 LLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYC 196

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  + +   ++  EM  K I P+VV Y+ +ID   K G+   A  +   M   G+  + V
Sbjct: 197 KSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVV 256

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +YN +++   K G  +EA+ V K+M   G+  D VTYN L+ G     + DE   + E+M
Sbjct: 257 TYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM 316

Query: 466 --KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
               + V PN++T++++I      G  ++A Q+    ++ G   ++V Y+ LI  L +  
Sbjct: 317 VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVH 376

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESAN-- 579
            V  A+ L+DEMT  G+ P+  TY+ +I  F +    +   D     RD G + E  +  
Sbjct: 377 KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436

Query: 580 --LDAMCSQDDKDVQEAGRT-----DNQI---IKVFGQLV--AEKAGQGKKENRCRQEIL 627
             L AMC Q    + E  R      DN     +  +  ++  A KAG  K      + I+
Sbjct: 437 PLLVAMCEQG---MMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIV 493

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                        + P+ VT+S ++N  ++    E A+ +L+++
Sbjct: 494 ----------DEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 127/226 (56%), Gaps = 3/226 (1%)

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEM---PAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           +D  +YNT+L A+C+    D A  ++  M   P     PN V+Y+ ++         D A
Sbjct: 75  RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           + +   M+  G+  D V+Y T++         ++A+ +  EM  SGI  + V Y++LL G
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           Y K G++++V ++F +M    + P+++ Y+ LID   K G  K+A  +     + GL+ +
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           VV Y+ LI+ +CK G V+ A+ +L +M+++G+ P+VVTYN++I   
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/427 (24%), Positives = 194/427 (45%), Gaps = 49/427 (11%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK-LASAMISILGRLGKVDLAKNIFE 217
           Y+ LL+     G W    + F   V+  E+  +    + + +I  L ++GK   A  + +
Sbjct: 188 YSSLLQGYCKSGRWEDVGKVF---VEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMD 244

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
             +  G    V  ++ LI+   + G  +EAI V   M    + P++VTYN +I    KG 
Sbjct: 245 MMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI----KGL 300

Query: 278 VDFKHVVE---IFDDMLR--NGVQPDRITFNSLL-AVCSRGGLWEA-------------- 317
            D   + E   + ++M+R  N V+P+ +TFNS++  +C  G + +A              
Sbjct: 301 SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMV 360

Query: 318 --------------------ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
                               A  L +EM   G++ D FTY+ L+   CK  Q+D A +++
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLL 420

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
           + M  + I P +  Y  ++    + G ++ A N+F+EM      LD V+Y+T++    K 
Sbjct: 421 STMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKA 479

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G  + A  + K +   G+  DAVTY+ ++  + K G  +    + +QM A    P++  +
Sbjct: 480 GDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVF 539

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
            +LI  YS  G   + +++ RE     +  D  + S L  +L  +   ++ +  L + + 
Sbjct: 540 DSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFSA 599

Query: 538 EGIRPNV 544
           E  + N+
Sbjct: 600 EISKGNI 606


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 188/376 (50%), Gaps = 8/376 (2%)

Query: 241 SGYCQ--EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
           +G C+  E  +    +++  +  ++V Y+ +ID+  KG         ++ +M+  G+ P+
Sbjct: 123 NGLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKF-VTDAYRLYSEMIAKGIFPN 181

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
             TF+ L+    +    + A NL   M+ +G+  ++ TY  ++D  C   Q++ A  I  
Sbjct: 182 VYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFN 241

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
            M  + + PNV  Y+ +I+G  K  R+D+A+N+F EM +  I  D V+YN ++    KLG
Sbjct: 242 VMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLG 301

Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
           +   +L +  EM S G   D +TYN+LL    K    D+   + +++K   + PN+ TY+
Sbjct: 302 KISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYT 361

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           TLID   K G  ++A  IF+E    G    V  Y+ +I+ LCK GL + A++LL  M   
Sbjct: 362 TLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDN 421

Query: 539 GIRPNVVTYNSIIDAFGRSA----TTECTVDDVERDLGKQ-KESANLDAMCSQDDKDVQE 593
              P+ V+Y +II A         T +     + R L K+ K+  N+  +   +DK    
Sbjct: 422 ACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLKKKVNMTTIADLNDKWAAY 481

Query: 594 AGRTDNQIIKVFGQLV 609
           A   D  I  +F  L+
Sbjct: 482 ASLEDGMIHPIFLMLL 497



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 190/367 (51%), Gaps = 35/367 (9%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           +  F+ ++++  +  +   AIS+F  ++   +KP++VT   +++  C  GG+ F  +  I
Sbjct: 10  ILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITF--LFSI 67

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAA------------------RNLFNEMVH 327
              +L+ G +P+ ITF +L+  +C  G  +EA                     L N +  
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 328 RG-------------IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            G             ++ D+  Y+T++D++CKG  +  A+ + +EM AK I PNV T+S 
Sbjct: 128 MGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSI 187

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++D   K  +   A+N+ + M   G+  + V+Y  ++  Y  + +  +AL +   M   G
Sbjct: 188 LVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEG 247

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  +   YN ++ G  K+ + DE   +F++M    ++P+++TY+ LID   K G    ++
Sbjct: 248 VEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSL 307

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++  E +  G   D++ Y++L+ ALCKN  ++ A++L+ E+  +GI+PNV TY ++ID  
Sbjct: 308 ELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGL 367

Query: 555 GRSATTE 561
            +    E
Sbjct: 368 CKDGRLE 374



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 171/331 (51%), Gaps = 8/331 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L   GE   A+Q       R+   N    + S +I  L +   V  A  ++  
Sbjct: 118 YAILMNGLCKMGETRAAMQML-----RKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSE 172

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            + +G    VY FS L+ A  +    ++A+++   M +  +KPN+VTY A++D  C    
Sbjct: 173 MIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQ 232

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           V+    + IF+ M++ GV+P+   +N ++    +    + A NLF EM  + I+ D+ TY
Sbjct: 233 VN--KALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTY 290

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L+D +CK  ++  + E++ EM +   + +++TY++++    K   LD A+ +  E+K 
Sbjct: 291 NILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKD 350

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI  +  +Y T++    K GR E+A ++ +E+ + G      TYN ++ G  K+G +DE
Sbjct: 351 QGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDE 410

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
              +  +M+ +   P+ ++Y T+I   S+ G
Sbjct: 411 ALALLSRMEDNACIPDAVSYETIIYALSEKG 441



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 198/462 (42%), Gaps = 75/462 (16%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           ML+    P  + FN +LA   +   +  A +LF ++   GI   I T   L++  C    
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +   F I+ ++      PN +T++T+I G          LN                   
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMC--------LN------------------- 93

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
                   G+  EALL    + + G + D V+Y  L+ G  K G   E R   + ++   
Sbjct: 94  --------GQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMG---ETRAAMQMLRKTW 142

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           V+ +++ YST+ID   KG    +A +++ E    G+  +V  +S L+DALCK+   + A+
Sbjct: 143 VNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAM 202

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
           +LL  M K+G++PNVVTY +I+D +       C V+ V + L         + M      
Sbjct: 203 NLLAMMMKKGVKPNVVTYGAIMDGY-------CLVNQVNKALNI------FNVM------ 243

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
            VQE    +     +    + +K    +  N           +F++MH  KI P+VVT++
Sbjct: 244 -VQEGVEPNVWCYNIIINGLCKKKRVDEAMN-----------LFKEMHWKKINPDVVTYN 291

Query: 650 AILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLM 707
            +++   +      +  L++E+R     V  + +  L+    +++   QA++L  E+K  
Sbjct: 292 ILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQ 351

Query: 708 DSSTASAFYNALTDMLWHFGQKRGA----QLVVLEGKRRQVW 745
                   Y  L D L   G+   A    Q ++ EG    VW
Sbjct: 352 GIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVW 393



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 1/131 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L + G+++ A  IF+  L EGY  TV+ ++ +I+   + G   EA+++ + M+ 
Sbjct: 361 TTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMED 420

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P+ V+Y  +I A  + G   K   ++   M+  G+        ++  +      W 
Sbjct: 421 NACIPDAVSYETIIYALSEKGETVK-TNKLLCAMIVRGLSKRLKKKVNMTTIADLNDKWA 479

Query: 317 AARNLFNEMVH 327
           A  +L + M+H
Sbjct: 480 AYASLEDGMIH 490


>gi|414888269|tpg|DAA64283.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
          Length = 616

 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 134/554 (24%), Positives = 244/554 (44%), Gaps = 99/554 (17%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAK--NI 215
           D+  + RE   RG+W ++++ F +  ++   + D+  + + +I +LGR G   L K   +
Sbjct: 105 DFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDE-HIHAIVIGVLGRQGPALLDKCLEV 163

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
           F     E    T  ++++LI+AY R+   +EA ++ + MK                    
Sbjct: 164 FHDLPAES--RTALSYTSLIAAYARNALHEEARALLDQMKA------------------- 202

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG----LWEAARNLFNEMVHRG-- 329
                             GV P   T+N++LA C+R       ++    LF EM H    
Sbjct: 203 -----------------TGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASP 245

Query: 330 -IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            +  D+ TYNTLL A    +  D +  ++  M    +SP+ V+Y  ++D +A AG L  A
Sbjct: 246 SVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAFASAGNLSRA 305

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             +FSEM   G   D  +Y  ++  + ++G   +A+ V ++M++ G    A TY  LL  
Sbjct: 306 AELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDL 365

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           YG+QG++D VR++F +M+   V P+  TY+ L  V+  GG +KE +++F +  + G++ D
Sbjct: 366 YGRQGRFDGVRQLFREMRT-AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPD 424

Query: 509 VVL-----------------------------------YSALIDALCKNGLVESAVSLLD 533
           +V                                    Y+ L++AL    + E A    +
Sbjct: 425 MVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFN 484

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSA---TTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
            MT+ G  P + TYN++  A+ R       E     +  + G QK   + DA+     + 
Sbjct: 485 MMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALI----EA 540

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV-------FQKMHKLKIKP 643
             +  R D+  +K + ++   +    ++         CI GV       F+++      P
Sbjct: 541 YCQGSRLDDA-VKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMP 599

Query: 644 NVVTFSAILNACSR 657
           +V+ +  +L+  +R
Sbjct: 600 SVIAYCMMLSLYAR 613



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 225/493 (45%), Gaps = 48/493 (9%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYN-LKPNLVTYNAVIDACGKGG-VDFKHVV 284
           T+  F+A+   + R G  Q ++ +F  M+R +  +P+   +  VI   G+ G       +
Sbjct: 102 TLQDFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPALLDKCL 161

Query: 285 EIF---------------------------------DDMLRNGVQPDRITFNSLLAVCSR 311
           E+F                                 D M   GV P   T+N++LA C+R
Sbjct: 162 EVFHDLPAESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACAR 221

Query: 312 GG----LWEAARNLFNEMVHRG---IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
                  ++    LF EM H     +  D+ TYNTLL A    +  D +  ++  M    
Sbjct: 222 ATDPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAG 281

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           +SP+ V+Y  ++D +A AG L  A  +FSEM   G   D  +Y  ++  + ++G   +A+
Sbjct: 282 VSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAV 341

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            V ++M++ G    A TY  LL  YG+QG++D VR++F +M+   V P+  TY+ L  V+
Sbjct: 342 AVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRT-AVPPDTATYNVLFRVF 400

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
             GG +KE +++F +  + G++ D+V    ++ A    GL   A  +L+ MT+EG+ P  
Sbjct: 401 GDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTA 460

Query: 545 VTYNSIIDAFGRSATTE--CTVDDVERDLGKQK--ESANLDAMCSQDDKDVQEAGRTDNQ 600
             Y  +++A G +A  E      ++  ++G     E+ N  A         QEA    ++
Sbjct: 461 DAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSR 520

Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEIL-CILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
           +    G   ++ +     E  C+   L   +  + +M K +  P+  +   +LNA     
Sbjct: 521 MSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAG 580

Query: 660 SFEDASMLLEELR 672
             +++    EEL+
Sbjct: 581 VIDESKEQFEELQ 593



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 166/384 (43%), Gaps = 47/384 (12%)

Query: 299 RITFNSLLAVC---SRGGLWEAARNLFNEMVHRG-IDQDIFTYNTLLDAICKG--AQMDL 352
           R+T     AV    SR G W+ +  LF  M  +     D   +  ++  + +   A +D 
Sbjct: 100 RLTLQDFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPALLDK 159

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
             E+  ++PA+  S   ++Y+++I  YA+    ++A  +  +MK  G+     +YNTVL+
Sbjct: 160 CLEVFHDLPAE--SRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLA 217

Query: 413 IYAKLGR----FEEALLVCKEME---SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
             A+       F+  L +  EM    S  +R D  TYN LL     +   D+   +   M
Sbjct: 218 ACARATDPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTM 277

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
               VSP+ ++Y  ++D ++  G    A ++F E    G  AD   Y  L++A  + G  
Sbjct: 278 LEAGVSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGAT 337

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
             AV++L +M  +G  P   TY  ++D +GR         D  R L ++  +A       
Sbjct: 338 ADAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRF-----DGVRQLFREMRTA------- 385

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
                V     T N + +VFG       G   KE         ++ +F  M K  ++P++
Sbjct: 386 -----VPPDTATYNVLFRVFGD------GGFFKE---------VVELFHDMLKTGVQPDM 425

Query: 646 VTFSAILNACSRCNSFEDASMLLE 669
           VT   ++ AC       DA  +LE
Sbjct: 426 VTCENVMAACGHGGLHGDAREVLE 449



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/360 (21%), Positives = 150/360 (41%), Gaps = 38/360 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++      G +  A  +F      G+     A+  L+ A+ R G   +A++V   M+   
Sbjct: 292 IVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADG 351

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
             P   TY  ++D  G+ G  F  V ++F +M R  V PD  T+N L  V   GG ++  
Sbjct: 352 CAPTAATYRVLLDLYGRQG-RFDGVRQLFREM-RTAVPPDTATYNVLFRVFGDGGFFKEV 409

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             LF++M+  G+  D+ T   ++ A   G     A E++  M  + + P    Y+ +++ 
Sbjct: 410 VELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEA 469

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
              A   ++A   F+ M  +G                 L   E                 
Sbjct: 470 LGHAAMYEEAYVAFNMMTEIG----------------SLPTLE----------------- 496

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADC-VSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
             TYNAL   Y + G + E   +F +M  +  +  +  ++  LI+ Y +G    +A++ +
Sbjct: 497 --TYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAY 554

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E +++    D      +++A C  G+++ +    +E+      P+V+ Y  ++  + R+
Sbjct: 555 MEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARN 614



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 137/335 (40%), Gaps = 46/335 (13%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISIL---GRLGKVDLAKNI 215
           Y  ++    + G  S+A + F+     E         ASA + ++    R+G    A  +
Sbjct: 289 YRHIVDAFASAGNLSRAAELFS-----EMAATGHTADASAYLGLMEAHTRVGATADAVAV 343

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
                 +G   T   +  L+  YGR G       +F  M R  + P+  TYN +    G 
Sbjct: 344 LRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREM-RTAVPPDTATYNVLFRVFGD 402

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           GG  FK VVE+F DML+ GVQPD +T  +++A C  GGL   AR +   M   G+     
Sbjct: 403 GGF-FKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTAD 461

Query: 336 TYNTLLDAICKGAQMD---LAFEIMAEMPA------------------------------ 362
            Y  L++A+   A  +   +AF +M E+ +                              
Sbjct: 462 AYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRM 521

Query: 363 ---KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
                I  +  ++  +I+ Y +  RLDDA+  + EM+      D  S   VL+ Y   G 
Sbjct: 522 SNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGV 581

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
            +E+    +E++SS      + Y  +L  Y +  +
Sbjct: 582 IDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDR 616


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 196/394 (49%), Gaps = 5/394 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  LG +G+  +      FA+      N  G   + +I  L +   VD A+ +   
Sbjct: 347 YTALMDWLGKQGKTDEVKDTLRFALSDNLSPN--GVTYTVLIDALCKAHNVDEAEQVLLE 404

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK-GG 277
              +     V  FS++I+ + + G   +A      MK   + PN+VTY  +ID   K  G
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            D    +E++ DML  GV+ ++   +SL+    + G  E A  LF +    G+  D   Y
Sbjct: 465 QD--AALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TL+D + K   M  AF+   E+  +N+ P+ V Y+  I+     G+  +A +  +EM+ 
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           +G+  D+ +YNT++  + + G   +AL +  EM+ S I+ + +TYN L+ G    G  ++
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            + +  +M +   SP+ LT+  ++   S+       + I      AGL AD+ +Y+ L+ 
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            LC +G+   A  +L+EM   GI P+ +T+N++I
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 226/491 (46%), Gaps = 36/491 (7%)

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           +++D  G G  D    + + D M   G+  D + +N+L+A   R G  +AAR + + M  
Sbjct: 175 SLLDIAGFG--DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKE 232

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G+D ++ TY   +   C+   ++ AF++   M    +  +VVT S ++ G  + GR  +
Sbjct: 233 AGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSE 292

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  +F EM  +G   + V+Y T++   AK GR +E L +  EM S G+  D VTY AL+ 
Sbjct: 293 AYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMD 352

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
             GKQGK DEV+       +D +SPN +TY+ LID   K     EA Q+  E ++  +  
Sbjct: 353 WLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISP 412

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF----GRSATTECT 563
           +VV +S++I+   K GL++ A      M + GI PNVVTY ++ID F    G+ A  E  
Sbjct: 413 NVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVY 472

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
            D +    G +     +D++ +         G   N  I+    L  + +G G   +   
Sbjct: 473 HDMLCE--GVKVNKFIVDSLVN---------GLRQNGKIEEAMALFKDASGSGLSLDHVN 521

Query: 624 QEILCILGVF------------QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              L I G+F            Q++    + P+ V ++  +N       F++A   L E+
Sbjct: 522 YTTL-IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580

Query: 672 RLF----DNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
           R      D   Y     ++   R     +AL L  E+K+         YN L   L+  G
Sbjct: 581 RNMGLKPDQSTYNTM--IVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTG 638

Query: 728 QKRGAQLVVLE 738
               A+ ++ E
Sbjct: 639 AVEKAKYLLNE 649



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 182/356 (51%), Gaps = 1/356 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R   V+ A +++E  +  G    V   SAL++   R G   EA ++F  M +    PN V
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TY  +ID+  K G   K ++ +  +M+  GV  D +T+ +L+    + G  +  ++    
Sbjct: 311 TYCTLIDSLAKAGRG-KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF 369

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
            +   +  +  TY  L+DA+CK   +D A +++ EM  K+ISPNVVT+S++I+G+ K G 
Sbjct: 370 ALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL 429

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD A      MK  GI  + V+Y T++  + K    + AL V  +M   G++ +    ++
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G  + GK +E   +F+      +S + + Y+TLID   K G    A +  +E     
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           +  D V+Y+  I+ LC  G  + A S L EM   G++P+  TYN++I +  R   T
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGET 605



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 195/405 (48%), Gaps = 7/405 (1%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKN-DQGKLASAMISILGRLGKVDLAKNIF 216
           +YT L+  L   G+   A   F F  +  +R       + +  I+ L  LGK   AK+  
Sbjct: 521 NYTTLIDGLFKAGDMPTA---FKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFL 577

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC-GK 275
               N G       ++ +I ++ R G   +A+ + + MK  ++KPNL+TYN ++    G 
Sbjct: 578 TEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGT 637

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G V+      + ++M+  G  P  +T   +L  CS+    +   ++   M++ G+  DI 
Sbjct: 638 GAVE--KAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADIT 695

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            YNTLL  +C       A  ++ EM    I+P+ +T++ +I G+ K+  LD+A   +++M
Sbjct: 696 VYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQM 755

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
               I  +  ++NT+L     +GR  EA  V  EME SG+  + +TY+ L  G+GKQ   
Sbjct: 756 LHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNK 815

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            E  R++ +M      P + TY+ LI  ++K G+  +A ++F++ ++ G+      Y  L
Sbjct: 816 VEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDIL 875

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           +    +          L +M ++G  P+  T + I  AF +   T
Sbjct: 876 VSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 122/497 (24%), Positives = 233/497 (46%), Gaps = 44/497 (8%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           +++ I G  G    A ++ +    +G    V  ++ L++ + R+G    A  V + MK  
Sbjct: 175 SLLDIAG-FGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEA 233

Query: 258 NLKPNLVTYNA-VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            + PN+ TY   ++  C   GV+     ++++ M+RNGV  D +T ++L+A   R G + 
Sbjct: 234 GVDPNVATYTPFIVYYCRTKGVE--EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFS 291

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF EM   G   +  TY TL+D++ K  +      ++ EM ++ +  ++VTY+ ++
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D   K G+ D+  +         +  + V+Y  ++    K    +EA  V  EME   I 
Sbjct: 352 DWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSIS 411

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + VT+++++ G+ K+G  D+       MK   ++PN++TY TLID + K      A+++
Sbjct: 412 PNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEV 471

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA--- 553
           + +    G+K +  +  +L++ L +NG +E A++L  + +  G+  + V Y ++ID    
Sbjct: 472 YHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFK 531

Query: 554 ---------FG-----RSATTECTVDDVERD----LGKQKESANLDAMCSQDDKDVQEAG 595
                    FG     R+   +  V +V  +    LGK KE+ +   +    +  ++   
Sbjct: 532 AGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF--LTEMRNMGLKPDQ 589

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNA 654
            T N +I                 + CR+ E    L +  +M    IKPN++T++ ++  
Sbjct: 590 STYNTMIV----------------SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633

Query: 655 CSRCNSFEDASMLLEEL 671
                + E A  LL E+
Sbjct: 634 LFGTGAVEKAKYLLNEM 650



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 184/364 (50%), Gaps = 4/364 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+++ L R G+   A  +F      G       +  LI +  ++G  +E +S+   M  
Sbjct: 278 SALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS 337

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             +  +LVTY A++D  GK G     V +     L + + P+ +T+  L+ A+C    + 
Sbjct: 338 RGVVMDLVTYTALMDWLGKQG-KTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA + L  EM  + I  ++ T++++++   K   +D A E    M  + I+PNVVTY T+
Sbjct: 397 EAEQVLL-EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTL 455

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG+ K    D AL ++ +M   G+ +++   +++++   + G+ EEA+ + K+   SG+
Sbjct: 456 IDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGL 515

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D V Y  L+ G  K G      +  +++    + P+ + Y+  I+     G +KEA  
Sbjct: 516 SLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKS 575

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-F 554
              E +  GLK D   Y+ +I + C+ G    A+ LL EM    I+PN++TYN+++   F
Sbjct: 576 FLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLF 635

Query: 555 GRSA 558
           G  A
Sbjct: 636 GTGA 639



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/565 (23%), Positives = 248/565 (43%), Gaps = 33/565 (5%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L + G+     ++    ++ G    +  ++AL+   G+ G   E           N
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           L PN VTY  +IDA C    VD     ++  +M    + P+ +TF+S++    + GL + 
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVD--EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDK 432

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A      M  RGI+ ++ TY TL+D   K    D A E+  +M  + +  N     ++++
Sbjct: 433 ATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVN 492

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  + G++++A+ +F +    G+ LD V+Y T++    K G    A    +E+    +  
Sbjct: 493 GLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLP 552

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           DAV YN  +      GK+ E +    +M+   + P+  TY+T+I  + + G   +A+++ 
Sbjct: 553 DAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLL 612

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E K + +K +++ Y+ L+  L   G VE A  LL+EM   G  P+ +T+  ++ A  +S
Sbjct: 613 HEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQS 672

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEA---GRTDNQIIKVFGQLVAEKAG 614
                   DV  D+ +   +A L A  +  +  +Q     G T    +     ++ E  G
Sbjct: 673 RRL-----DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATV-----VLEEMLG 722

Query: 615 QGKKENRCRQEILCILG------------VFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
            G   +      L ILG             + +M    I PN+ TF+ +L          
Sbjct: 723 SGIAPDTITFNAL-ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIG 781

Query: 663 DASMLLEELRLFDNQVYGVAHGLLM---GYRDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
           +A  +L E+     +   + + +L    G + N  V+A+ L+ E+         + YNAL
Sbjct: 782 EAGTVLIEMEKSGLEPNNLTYDILATGHGKQSN-KVEAMRLYCEMVGKGFVPKVSTYNAL 840

Query: 720 TDMLWHFGQKRGAQLVVLEGKRRQV 744
                  G    A+ +  + ++R V
Sbjct: 841 ISDFTKAGMMTQAKELFKDMQKRGV 865



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 176/365 (48%), Gaps = 3/365 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           +  ++++ L + GK++ A  +F+ A   G       ++ LI    ++G    A      +
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
              N+ P+ V YN  I+  C  G   FK       +M   G++PD+ T+N+++    R G
Sbjct: 546 MDRNMLPDAVVYNVFINCLCMLG--KFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKG 603

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
               A  L +EM    I  ++ TYNTL+  +     ++ A  ++ EM +   SP+ +T+ 
Sbjct: 604 ETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            ++   +++ RLD  L++   M   G+  D   YNT+L +    G   +A +V +EM  S
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI  D +T+NAL+ G+ K    D     + QM    +SPN+ T++TL+      G   EA
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             +  E +++GL+ + + Y  L     K      A+ L  EM  +G  P V TYN++I  
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 554 FGRSA 558
           F ++ 
Sbjct: 844 FTKAG 848



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 206/474 (43%), Gaps = 82/474 (17%)

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ------ 349
           +P  + +N LLA  S       A  +  EM  RG+  D  T NTLL  +C+  Q      
Sbjct: 100 RPTTVAYNILLAALSD---HAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 350 --------------------MDL--------AFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
                               +D+        A  +   M A+ +  +VV Y+T++ G+ +
Sbjct: 157 LADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           AG++D A  +   MK  G+  +  +Y   +  Y +    EEA  + + M  +G+  D VT
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
            +AL+ G  + G++ E   +F +M     +PN +TY TLID  +K G  KE + +  E  
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G+  D+V Y+AL+D L K G  +     L     + + PN VTY  +IDA  ++    
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAH--- 393

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL-VAEKAGQGKKEN 620
             VD+ E+ L + +E            K +     T + +I  F +  + +KA + K+  
Sbjct: 394 -NVDEAEQVLLEMEE------------KSISPNVVTFSSVINGFVKRGLLDKATEYKR-- 438

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS------MLLEELRLF 674
                          M +  I PNVVT+  +++   +    +DA+      ML E +++ 
Sbjct: 439 --------------MMKERGINPNVVTYGTLIDGFFKFQG-QDAALEVYHDMLCEGVKV- 482

Query: 675 DNQVYGVAHGLLMGYRDNIWV-QALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
            N+   +   L+ G R N  + +A++LF +      S     Y  L D L+  G
Sbjct: 483 -NKF--IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533


>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 207/397 (52%), Gaps = 15/397 (3%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+  G+LG  + A+ +       G    V +++AL+ +YGR G C  A ++F  M+   
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML---RNGVQPDRITFNSLLAVCSRGGLW 315
            +P+ +TY  ++    +G   FK   E+F+ +L   ++ ++PD+  ++ ++ +  + G +
Sbjct: 212 PEPSAITYQIILKTFVEGD-KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E AR +F+ MV +G+ Q   TYN+L+       ++    +I  +M   +I P+VV+Y+ +
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALL 327

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I  Y +A R ++AL++F EM   G+     +YN +L  +A  G  E+A  V K M    I
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  +Y  +L  Y      +   + F+++K D   PN++TY TLI  Y+K    ++ M+
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 447

Query: 496 IFREFKQAGLKADVVLYSALIDA--LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           ++ + + +G+KA+  + + ++DA   CKN    SA+    EM   G+ P+    N ++  
Sbjct: 448 VYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGVPPDQKAKNVLLSL 505

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
               A+T+  +++ +   G + E+A + A     D D
Sbjct: 506 ----ASTQDELEEAKELTGIRNETATIIARVYGSDDD 538



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 143/346 (41%), Gaps = 63/346 (18%)

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           + +  +I  Y K G  + A  + S +  +G   + +SY  ++  Y + G+   A  + + 
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM---KADCVSPNLLTYSTLIDVYSK 486
           M+SSG    A+TY  +L  + +  K+ E   +FE +   K   + P+   Y  +I +Y K
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266

Query: 487 GG--------------------------------LYKEAMQIFREFKQAGLKADVVLYSA 514
            G                                 YKE  +I+ + +++ ++ DVV Y+ 
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYAL 326

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC--TV------DD 566
           LI A  +    E A+S+ +EM   G+RP    YN ++DAF  S   E   TV      D 
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386

Query: 567 VERDLGKQKESANLDAMCSQDD--------KDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
           +  DL     +  L A  +  D        K ++  G   N  I  +G L+   A     
Sbjct: 387 IFPDLWSY--TTMLSAYVNASDMEGAEKFFKRIKVDGFEPN--IVTYGTLIKGYAKANDV 442

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           E         ++ V++KM    IK N    + I++A  RC +F  A
Sbjct: 443 EK--------MMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSA 480



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 148/328 (45%), Gaps = 30/328 (9%)

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           FSE+ FL           +++ Y KLG F  A  V   +   G   + ++Y AL+  YG+
Sbjct: 144 FSEIDFL----------MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGR 193

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF---KQAGLKAD 508
            GK +    +F +M++    P+ +TY  ++  + +G  +KEA ++F      K++ LK D
Sbjct: 194 GGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPD 253

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
             +Y  +I    K G  E A  +   M  +G+  + VTYNS++       + E +  +V 
Sbjct: 254 QKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM-------SFETSYKEVS 306

Query: 569 RDLGK-QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
           +   + Q+     D +            R + + + VF +++        K      +  
Sbjct: 307 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 366

Query: 628 CILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG 680
            I G       VF+ M + +I P++ +++ +L+A    +  E A    + +++   +   
Sbjct: 367 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 426

Query: 681 VAHG-LLMGY-RDNIWVQALSLFDEVKL 706
           V +G L+ GY + N   + + ++++++L
Sbjct: 427 VTYGTLIKGYAKANDVEKMMEVYEKMRL 454



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/282 (21%), Positives = 124/282 (43%), Gaps = 33/282 (11%)

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           + +  LI  Y K G +  A ++     + G   +V+ Y+AL+++  + G   +A ++   
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206

Query: 535 MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEA 594
           M   G  P+ +TY  I+  F            VE D  K+ E    + +  +    ++  
Sbjct: 207 MQSSGPEPSAITYQIILKTF------------VEGDKFKEAEEV-FETLLDEKKSPLKPD 253

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
            +  + +I ++     +KAG  +K  +          VF  M    +  + VT+++++  
Sbjct: 254 QKMYHMMIYMY-----KKAGNYEKARK----------VFSSMVGKGVPQSTVTYNSLM-- 296

Query: 655 CSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTA 712
            S   S+++ S + ++++  D Q   V++ LL+  Y R     +ALS+F+E+        
Sbjct: 297 -SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPT 355

Query: 713 SAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
              YN L D     G    A+ V    +R +++ ++WS + +
Sbjct: 356 HKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 397


>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Brachypodium distachyon]
          Length = 800

 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 197/419 (47%), Gaps = 5/419 (1%)

Query: 141 SLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMI 200
           SL   L   +  L  A D   LL+ L   G W  A+    +   R E           ++
Sbjct: 99  SLPAFLSSRKDDLLRAADVPSLLKALELSGHWEWALALVRWV--RAEGGAADAAALEMVV 156

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNT---VYAFSALISAYGRSGYCQEAISVFNSMKRY 257
             L R G+ D   ++ +  L    G+    V A++ ++ A    G  + A+ +F  +KR 
Sbjct: 157 RTLAREGQHDAVCDLLDEMLPLPPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKRE 216

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            + P  V YN ++D  G+ G  +  +V + ++M   GV+PD  T ++++A C R GL + 
Sbjct: 217 GVAPTHVMYNVMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDE 276

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A   F ++  RG    + TYN LL    K      A  ++ EM      P+ VTY+ +  
Sbjct: 277 AVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAG 336

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            YA+AG  ++A      M   GI  +  +YNT+++ Y   G+ +EAL +   M+ +G   
Sbjct: 337 SYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIP 396

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
              TYN +LG  GK+ +++ +  M  +M     +PN +T++T++ V  K G+     ++ 
Sbjct: 397 YVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVL 456

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
              K  G++     ++ LI A  + G   +A  + DEMT  G  P + TYN+++    R
Sbjct: 457 ERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSR 515



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 130/533 (24%), Positives = 247/533 (46%), Gaps = 38/533 (7%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKV-DLAKNIFE 217
           YT +L  L + G + +A++ FA  +KRE        + + M+ + GR+G+       + E
Sbjct: 190 YTTVLHALSHEGRYERALELFA-ELKREGVAPTH-VMYNVMLDVYGRMGRSWPQIVAMLE 247

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                G     +  S +I+A GR G   EA++ F  +K     P +VTYNA++   GK G
Sbjct: 248 EMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAG 307

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            ++   + +  +M  +G +PD +T+N L    +R G +E A    + MV +GI  + FTY
Sbjct: 308 -NYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTY 366

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           NT++ A     ++D A  +   M      P V TY+ ++    K  R +  L M  EM  
Sbjct: 367 NTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSR 426

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   +RV++NT+L++  K G       V + M+S G+     T+N L+  YG+ G    
Sbjct: 427 SGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRAN 486

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             +M+++M A   +P L TY+ L+ V S+ G +  A  I  + K  G K + + YS L+ 
Sbjct: 487 AFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQ 546

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC-TVDDVERDL----- 571
              K G      ++  E+ +  + P+ V   +++      +  +C  ++ +ER       
Sbjct: 547 CHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLV-----ISNFKCRRLEGIERAFQEVMA 601

Query: 572 -GKQKESANLDAMCSQDDKD------------VQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
            G + +    ++M S   K+            +++ G + + I       +  K+ +  +
Sbjct: 602 RGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWE 661

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             +          + +++   ++KP+VV+++ ++N   +    ++A  +L E+
Sbjct: 662 AEK----------ILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEM 704



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/471 (24%), Positives = 213/471 (45%), Gaps = 38/471 (8%)

Query: 123 VVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFA 180
           VV   AL  V   A + +    +LK+ E   C  D  T+  L       G + +A +C  
Sbjct: 293 VVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLD 352

Query: 181 FAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
             V +    N      + +++  G  GKVD A  +F+     G+   V  ++ ++   G+
Sbjct: 353 TMVSKGILPN--AFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGK 410

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD--------------------- 279
                  + +   M R    PN VT+N ++  CGK G++                     
Sbjct: 411 KSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDT 470

Query: 280 FKHVV-------------EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           F  ++             +++D+M   G  P   T+N+LL+V SR G W AA+++ N+M 
Sbjct: 471 FNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMK 530

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
           + G   +  +Y+ LL    KG        I  E+    + P+ V   T++    K  RL+
Sbjct: 531 NEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLE 590

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
                F E+   G   D V +N++LS+YAK G + +A  +   ++  G+  D +TYN+++
Sbjct: 591 GIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMM 650

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
             Y K  +  E  ++ +++K   + P++++Y+T+++ + K GL KEA +I  E    G++
Sbjct: 651 DMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVR 710

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
             VV Y  L+       +   A  ++  M +  + P  +TY  ++D++ ++
Sbjct: 711 PCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLSPMELTYRRVVDSYCKA 761



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 226/512 (44%), Gaps = 48/512 (9%)

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           DD+LR    P      SLL      G WE A  L   +   G   D      ++  + + 
Sbjct: 109 DDLLRAADVP------SLLKALELSGHWEWALALVRWVRAEGGAADAAALEMVVRTLARE 162

Query: 348 AQMDLAFEIMAEM-PAKNISP--NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
            Q D   +++ EM P    SP  +V  Y+T++   +  GR + AL +F+E+K  G+    
Sbjct: 163 GQHDAVCDLLDEMLPLPPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKREGVAPTH 222

Query: 405 VSYNTVLSIYAKLGR-FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
           V YN +L +Y ++GR + + + + +EM ++G+  D  T + ++   G+ G  DE    FE
Sbjct: 223 VMYNVMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFE 282

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
            +K+    P ++TY+ L+ V+ K G Y EA+++ +E +++G K D V Y+ L  +  + G
Sbjct: 283 DLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAG 342

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
             E A   LD M  +GI PN  TYN+I+ A+G +      VD+        K++  +  +
Sbjct: 343 FYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAG----KVDEALALFDWMKKNGFIPYV 398

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
                        T N I+ + G+               +     +L +  +M +    P
Sbjct: 399 ------------NTYNLILGMLGK---------------KSRFNVMLEMLGEMSRSGCTP 431

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV-YGVAHGLLMGY-RDNIWVQALSLF 701
           N VT++ +L  C +       + +LE ++    ++     + L+  Y R      A  ++
Sbjct: 432 NRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMY 491

Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSS 761
           DE+     +     YNAL  +L   G    AQ ++ + K      N  S S L L   + 
Sbjct: 492 DEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLL-LQCHAK 550

Query: 762 GAARAMVHAWLLNIHSIVFEGHELPKLLSILT 793
           G   A + A    I   V+EG   P  + + T
Sbjct: 551 GGNAAGIEA----IEKEVYEGTVFPSWVILRT 578



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 158/354 (44%), Gaps = 36/354 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + M+++ G+ G       + E   + G       F+ LISAYGR G    A  +++ M  
Sbjct: 437 NTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTA 496

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG--- 313
               P L TYNA++    + G D+     I + M   G +P+ ++++ LL   ++GG   
Sbjct: 497 AGFTPCLTTYNALLSVLSRQG-DWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAA 555

Query: 314 ----------------LWEAARNL----------------FNEMVHRGIDQDIFTYNTLL 341
                            W   R L                F E++ RG   D+  +N++L
Sbjct: 556 GIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSML 615

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
               K      A E+   +    +SP+++TY++M+D YAK+    +A  +   +K   + 
Sbjct: 616 SMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLK 675

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D VSYNTV++ + K G  +EA  +  EM + G+R   VTY+ L+GGY  +  + E R +
Sbjct: 676 PDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGYASREMFSEAREV 735

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
              M    +SP  LTY  ++D Y K   + EA     E  +    +D  L S L
Sbjct: 736 VSYMIQRNLSPMELTYRRVVDSYCKAKRFDEARGFLYEIAETDRNSDQKLLSTL 789


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 173/327 (52%), Gaps = 1/327 (0%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            F  LI  Y R G  Q+++ +F  M  Y   P++ T NA++ +  K   D   V     +
Sbjct: 125 VFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVS-VWSFLKE 183

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           ML+  + PD  TFN L+ V    G ++ +  L  +M   G    I TYNT+L   CK  +
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              A E++  M  K ++ +V TY+ +I    ++ R      +  +M+   I  + V+YNT
Sbjct: 244 FKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNT 303

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +L+ ++  G+   A  +  EM + G+  + VT+NAL+ G+  +G + E  +MF  M+A  
Sbjct: 304 LLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKG 363

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           +    ++Y  L+D   K   +  A   +   K+ G+    + Y+ +ID LCKNG ++ AV
Sbjct: 364 LIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +L+EM+K+GI P++VTY+++I+ F R
Sbjct: 424 VMLNEMSKDGIDPDIVTYSALINGFCR 450



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 211/465 (45%), Gaps = 31/465 (6%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GKV +A+ +    L  G       F+ALI  +   G  +EA+ +F+ M+   L    V+Y
Sbjct: 312 GKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSY 371

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
             ++D   K   +F      +  M RNGV   RIT+  ++    + G  + A  + NEM 
Sbjct: 372 GVLLDGLCKNA-EFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMS 430

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             GID DI TY+ L++  C+  ++  A EI+  +    +SPN + YST+I    + G L 
Sbjct: 431 KDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           + + ++  M   G   D  ++N +++   K G+  EA    + M S GI  +AV+++ L+
Sbjct: 491 ETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLI 550

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            GYG  G+  +   +F++M      P   TY +L+    KGG    A +  +  +     
Sbjct: 551 NGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAA 610

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            D V+ + LI A+CK+G ++ AVSL  EM +  I P+  TY S+I    R   T   +  
Sbjct: 611 VDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAI-- 668

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
                 K+ E+                     N+++         KAGQ K     RQ+ 
Sbjct: 669 ---LFAKEAEA---------------RGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQ- 709

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                    M KL +  +VVT +A+++  SR    E    LL E+
Sbjct: 710 ---------MDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEM 745



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 192/363 (52%), Gaps = 3/363 (0%)

Query: 190 NDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS 249
           N    +   +I +  R G +  +  IF      G+  +VY  +A++ +  +S       S
Sbjct: 120 NSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWS 179

Query: 250 VFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
               M +  + P++ T+N +I+  C +G   FK    +   M ++G  P  +T+N++L  
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEG--SFKKSSYLMQKMEKSGYAPTIVTYNTVLHW 237

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
             + G ++AA  L + M  +G++ D+ TYN L+  +C+  +    + ++ +M  + I PN
Sbjct: 238 YCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPN 297

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
            VTY+T+++G++  G++  A  + +EM   G+  + V++N ++  +   G F+EAL +  
Sbjct: 298 EVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFH 357

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            ME+ G+    V+Y  LL G  K  ++D  R  + +MK + V    +TY+ +ID   K G
Sbjct: 358 MMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
              EA+ +  E  + G+  D+V YSALI+  C+ G +++A  ++  + + G+ PN + Y+
Sbjct: 418 FLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYS 477

Query: 549 SII 551
           ++I
Sbjct: 478 TLI 480



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 224/518 (43%), Gaps = 36/518 (6%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID-ACGKGGVDFKHVVEI 286
           V  F+ LI+     G  +++  +   M++    P +VTYN V+   C KG   FK  +E+
Sbjct: 193 VATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG--RFKAAIEL 250

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
            D M   GV  D  T+N L+    R         L  +M  R I  +  TYNTLL+    
Sbjct: 251 LDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSN 310

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             ++ +A +++ EM    +SPN VT++ +IDG+   G   +AL MF  M+  G+    VS
Sbjct: 311 EGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVS 370

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y  +L    K   F+ A      M+ +G+    +TY  ++ G  K G  DE   M  +M 
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMS 430

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            D + P+++TYS LI+ + + G  K A +I     + GL  + ++YS LI   C+ G ++
Sbjct: 431 KDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
             + + + M  EG  P+  T+N ++ +  ++              GK  E+      C  
Sbjct: 491 ETIRIYEAMILEGNTPDHFTFNVLVTSLCKA--------------GKVAEAEEF-MRCMT 535

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
            D  +  A   D  +I  +G      +G+G K             VF +M K+   P   
Sbjct: 536 SDGILPNAVSFD-CLINGYGS-----SGEGLKA----------FSVFDEMTKVGHHPTFF 579

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEV 704
           T+ ++L    +      A   L+ L+     V  V    L+    +     +A+SLF E+
Sbjct: 580 TYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEM 639

Query: 705 KLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
                   S  Y +L   L   G+   A L   E + R
Sbjct: 640 VQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEAR 677



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 183/379 (48%), Gaps = 3/379 (0%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L +  + DLA+  +      G       ++ +I    ++G+  EA+ + N M +  + P+
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPD 437

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           +VTY+A+I+   + G   K   EI   + R G+ P+ I +++L+  C R G  +    ++
Sbjct: 438 IVTYSALINGFCRVG-RLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIY 496

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
             M+  G   D FT+N L+ ++CK  ++  A E M  M +  I PN V++  +I+GY  +
Sbjct: 497 EAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSS 556

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G    A ++F EM  +G      +Y ++L    K G    A    K +++     D V  
Sbjct: 557 GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMC 616

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           N L+    K G  D+   +F +M    + P+  TY++LI    + G    A+   +E + 
Sbjct: 617 NTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 503 AG-LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            G L  + V+Y+  +D + K G  ++      +M K G+  +VVT N++ID + R    E
Sbjct: 677 RGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIE 736

Query: 562 CTVDDVERDLGKQKESANL 580
            T  D+  ++G Q +  NL
Sbjct: 737 KT-HDLLFEMGNQNQGPNL 754



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 163/352 (46%), Gaps = 7/352 (1%)

Query: 223  GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
            G    V   +A+I  Y R G  ++   +   M   N  PNL TYN ++    K     KH
Sbjct: 714  GLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKR----KH 769

Query: 283  V---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
            V     ++  M+ +G+ PD++T  S++       + E    +    + RG++ D  T+N 
Sbjct: 770  VSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNM 829

Query: 340  LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
            L+   C   +++ AF+++  M +  IS +  T   ++    +  R  ++  +  EM   G
Sbjct: 830  LISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQG 889

Query: 400  IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
            I  +   Y  +L+   ++G  + A +V +EM +  I    V  +A++    K GK DE  
Sbjct: 890  ISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAS 949

Query: 460  RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
             +   M    + P + +++TL+ ++ K G   EA+++       GLK D+V Y+ LI  L
Sbjct: 950  LLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGL 1009

Query: 520  CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
            C  G +  A  L +EM ++G   NV TY +++       T     D + +DL
Sbjct: 1010 CAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDL 1061



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/388 (23%), Positives = 174/388 (44%), Gaps = 20/388 (5%)

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
            F+ L+ V  R G+ + +  +F  M   G +  ++T N +L +I K  +    +  + EM
Sbjct: 125 VFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEM 184

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
             + I P+V T++ +I+     G    +  +  +M+  G     V+YNTVL  Y K GRF
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           + A+ +   M   G+  D  TYN L+    +  +  +   +   M+   + PN +TY+TL
Sbjct: 245 KAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTL 304

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           ++ +S  G    A Q+  E    GL  + V ++ALID     G  + A+ +   M  +G+
Sbjct: 305 LNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGL 364

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVER------DLGKQKESANLDAMCSQ---DDKDV 591
               V+Y  ++D   ++A  +       R       +G+   +  +D +C     D+  V
Sbjct: 365 IGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424

Query: 592 QEAGRTDNQI---IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
                + + I   I  +  L+      G+ +    +EI+C      +++++ + PN + +
Sbjct: 425 MLNEMSKDGIDPDIVTYSALINGFCRVGRLKT--AKEIVC------RIYRVGLSPNGIIY 476

Query: 649 SAILNACSRCNSFEDASMLLEELRLFDN 676
           S ++  C R    ++   + E + L  N
Sbjct: 477 STLIYNCCRMGCLKETIRIYEAMILEGN 504



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/436 (20%), Positives = 181/436 (41%), Gaps = 72/436 (16%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +++ L + GKV  A+       ++G      +F  LI+ YG SG   +A SVF+ M +
Sbjct: 512 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTK 571

Query: 257 YNLKPNLVTYNAVIDACGKGG------------------VD----------------FKH 282
               P   TY +++    KGG                  VD                   
Sbjct: 572 VGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDK 631

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLA-VCSRG----------------------------- 312
            V +F +M++  + PD  T+ SL++ +C +G                             
Sbjct: 632 AVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFV 691

Query: 313 ------GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
                 G W+A      +M   G+ +D+ T N ++D   +  +++   +++ EM  +N  
Sbjct: 692 DGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQG 751

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS-YNTVLSIYAKLGRFEEALL 425
           PN+ TY+ ++ GY+K   +  +  ++  M   GI  D+++ Y+ +L I  +    E  L 
Sbjct: 752 PNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGI-CESNMLEIGLK 810

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + K     G+  D  T+N L+      G+ +    M   M +  +S +  T   ++ V +
Sbjct: 811 ILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLN 870

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           +   ++E+  +  E  + G+  +   Y  L++ LC+ G +++A  + +EM    I P  V
Sbjct: 871 RNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNV 930

Query: 546 TYNSIIDAFGRSATTE 561
             ++++ A  +    +
Sbjct: 931 AESAMVRALAKCGKAD 946


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 170/328 (51%), Gaps = 3/328 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  ++ LI    +    QEA+     M      P+  TYN +ID   K  +  +   E+ 
Sbjct: 256 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM-VQEATELL 314

Query: 288 DDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
            D +  G  PD++T+ SL+  +C+ G + E A  LFNE   +GI  DI  YN+L+  +C 
Sbjct: 315 KDAVFKGFVPDQVTYCSLINGLCAEGDV-ERALELFNEAQAKGIKPDIVVYNSLVKGLCL 373

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +  A ++M EM  +   P++ TY+ +I+G  K G + DA  + ++    G   D  +
Sbjct: 374 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 433

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +NT++  Y K  + + AL + + M   GI  D +TYN++L G  K GK +EV   F++M 
Sbjct: 434 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 493

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
                PN +TY+ LI+ + +    +EA ++  +  Q GL  D V ++ LI   C+NG +E
Sbjct: 494 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 553

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            A  L  ++ ++G      T+N++I AF
Sbjct: 554 GAYLLFQKLEEKGYSATADTFNTLIGAF 581



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 189/352 (53%), Gaps = 5/352 (1%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++  V  A  + + A+ +G+      + +LI+     G  + A+ +FN  +   +KP++V
Sbjct: 303 KISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIV 362

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
            YN+++   C +G +   H +++ ++M   G  PD  T+N ++  +C  G + +A   + 
Sbjct: 363 VYNSLVKGLCLQGLI--LHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATV-VM 419

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           N+ + +G   D+FT+NTL+D  CK  ++D A +++  M    I+P+ +TY+++++G  KA
Sbjct: 420 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 479

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G++++    F EM   G   + ++YN ++  + +  + EEA  V  +M   G+  DAV++
Sbjct: 480 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 539

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           N L+ G+ + G  +    +F++++    S    T++TLI  +S       A +IF E   
Sbjct: 540 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 599

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            G +AD   Y  LID  CK   V+ A   L EM K+G  P++ T+  +I++ 
Sbjct: 600 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 651



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 176/351 (50%), Gaps = 3/351 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A +     +N+G     + ++ +I  Y +    QEA  +          P+ VTY ++I+
Sbjct: 275 AMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 334

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
             C +G  D +  +E+F++    G++PD + +NSL+      GL   A  + NEM   G 
Sbjct: 335 GLCAEG--DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC 392

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             DI TYN +++ +CK   +  A  +M +   K   P+V T++T+IDGY K  +LD AL 
Sbjct: 393 HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQ 452

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +   M   GI  D ++YN+VL+   K G+  E     +EM   G   + +TYN L+  + 
Sbjct: 453 LVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFC 512

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           +  K +E  ++  +M  + + P+ ++++TLI  + + G  + A  +F++ ++ G  A   
Sbjct: 513 RSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATAD 572

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            ++ LI A      +  A  + DEM  +G R +  TY  +ID   ++A  +
Sbjct: 573 TFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 623



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 239/522 (45%), Gaps = 55/522 (10%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L  A I    R G++  A + FE            A++A++ A   + Y  +A  V+  M
Sbjct: 53  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 112

Query: 255 KRYNLKPNLVTYNAVIDA-C----------------GKGGVDFKHVV------------- 284
               + P+L T+   + + C                 +G V +  VV             
Sbjct: 113 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDAR 172

Query: 285 EIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           ++FD ML   V P+   FN +L A+C RG + EA   L  +++ RG+  ++FTYN  +  
Sbjct: 173 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL-LLGKVIQRGMSINLFTYNIWIRG 231

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +C+  ++  A  ++  M A  + P+VVTY+T+I G  K     +A++    M   G   D
Sbjct: 232 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 290

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +YNT++  Y K+   +EA  + K+    G   D VTY +L+ G   +G  +    +F 
Sbjct: 291 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 350

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           + +A  + P+++ Y++L+      GL   A+Q+  E  + G   D+  Y+ +I+ LCK G
Sbjct: 351 EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMG 410

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKESAN-- 579
            +  A  ++++   +G  P+V T+N++ID + +    +  +  VER  + G   ++    
Sbjct: 411 NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 470

Query: 580 --LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK------KENRCRQEILCILG 631
             L+ +C        +AG+  N++ + F +++ +             EN CR   +    
Sbjct: 471 SVLNGLC--------KAGKV-NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 521

Query: 632 -VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            V  KM +  + P+ V+F+ ++    R    E A +L ++L 
Sbjct: 522 KVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 563



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 174/357 (48%), Gaps = 5/357 (1%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++I+ L   G V+ A  +F  A  +G    +  +++L+      G    A+ V N M   
Sbjct: 331 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 390

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
              P++ TYN VI+   K G +      + +D +  G  PD  TFN+L+   C R  L +
Sbjct: 391 GCHPDIQTYNIVINGLCKMG-NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL-D 448

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +A  L   M   GI  D  TYN++L+ +CK  +++   E   EM  K   PN +TY+ +I
Sbjct: 449 SALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 508

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           + + ++ ++++A  +  +M   G+  D VS+NT++  + + G  E A L+ +++E  G  
Sbjct: 509 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYS 568

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             A T+N L+G +  +       ++F++M +     +  TY  LID   K      A   
Sbjct: 569 ATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMH 628

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             E  + G    +  +  +I++L  N  V  AV ++  M K G+ P VV  ++I++A
Sbjct: 629 LVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNA 683



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 1/204 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++++ L + GKV+     F+  + +G       ++ LI  + RS   +EA  V   M +
Sbjct: 470 NSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ 529

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P+ V++N +I    + G D +    +F  +   G      TFN+L+   S      
Sbjct: 530 EGLHPDAVSFNTLIYGFCRNG-DLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 588

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +F+EM+ +G   D +TY  L+D  CK A +D A+  + EM  K   P++ T+  +I
Sbjct: 589 MAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVI 648

Query: 377 DGYAKAGRLDDALNMFSEMKFLGI 400
           +      R+  A+ +   M  +G+
Sbjct: 649 NSLTVNHRVFQAVGIIHIMVKIGV 672


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 222/423 (52%), Gaps = 9/423 (2%)

Query: 144 DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           D+L + E   C  + +T+  L+  L   G   +A++     +KR+  + D   + S +IS
Sbjct: 31  DLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLG-EMKRKGLEVDV-VVYSTLIS 88

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
                G +D  K +F+  L +G    V  +S LI+ + + G  +EA +V ++M    ++P
Sbjct: 89  GFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQP 148

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARN 320
           ++ TY  +I    K G   +  +++FD M   G +P  +T+N L+  +C  G + +A + 
Sbjct: 149 DVYTYTCMIGGLCKDG-RARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFK- 206

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM--PAKNISPNVVTYSTMIDG 378
           +F  M+ +G   ++ +YNTL+  +C   ++D A ++ + +      + P+V+T++T+I G
Sbjct: 207 IFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQG 266

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K GRLD A+ ++  M   G   +  + + ++  Y K G  ++A+ + K +   G+   
Sbjct: 267 LCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPS 326

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           + TY+ ++ G+ K    +  + +F +MK   +SP L  Y+TL+    K    ++A ++F+
Sbjct: 327 STTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQ 386

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E K++  + D + ++ +ID   K G + SA  LL++M + G+ P+  TY+S I+   +  
Sbjct: 387 EMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLG 446

Query: 559 TTE 561
             E
Sbjct: 447 QME 449



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 206/439 (46%), Gaps = 36/439 (8%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIF 287
           + +  L+    + G  +EA+ +   MKR  L+ ++V Y+ +I   C KG +D      +F
Sbjct: 46  FTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKA--LF 103

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           D+ML  G+ P+ + ++ L+    + GLW  A  + + M  RGI  D++TY  ++  +CK 
Sbjct: 104 DEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKD 163

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +   A ++   M  K   P+ VTY+ +I+G  K G + DA  +F  M   G  L+ VSY
Sbjct: 164 GRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSY 223

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSG--IRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           NT++      G+ +EA+ +   +   G  +  D +T+N ++ G  K+G+ D+   +++ M
Sbjct: 224 NTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTM 283

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
                  NL T   LI  Y K G+  +AM++++   + GL      YS +ID  CK  ++
Sbjct: 284 IERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHML 343

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
             A  L   M   G+ P +  YN+++ +  +    E +++   R   + KES      C 
Sbjct: 344 NFAKGLFSRMKISGLSPTLFDYNTLMASLCK----ESSLEQARRLFQEMKESN-----CE 394

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
            D         T +  I + G L A      K+             +   M ++ + P+ 
Sbjct: 395 PD---------TISFNIMIDGTLKAGDIHSAKE-------------LLNDMQQMGLTPDA 432

Query: 646 VTFSAILNACSRCNSFEDA 664
            T+S+ +N  S+    E+A
Sbjct: 433 YTYSSFINRLSKLGQMEEA 451



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 194/403 (48%), Gaps = 7/403 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+     +G W +A        +R  + +      + MI  L + G+   A ++F+ 
Sbjct: 118 YSCLINGFCKKGLWREATAVLHTMTERGIQPDVY--TYTCMIGGLCKDGRARKALDLFDL 175

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI-DACGKGG 277
              +G   +   ++ LI+   + G   +A  +F +M     +  +V+YN +I   C  G 
Sbjct: 176 MTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGK 235

Query: 278 VDFKHVVEIFDDMLRNG--VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           +D    +++F  +L +G  V+PD ITFN+++    + G  + A  +++ M+ RG   ++F
Sbjct: 236 LD--EAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLF 293

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           T + L+    K   +D A E+   +    + P+  TYS MIDG+ K   L+ A  +FS M
Sbjct: 294 TCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRM 353

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           K  G+      YNT+++   K    E+A  + +EM+ S    D +++N ++ G  K G  
Sbjct: 354 KISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDI 413

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
              + +   M+   ++P+  TYS+ I+  SK G  +EA   F     +G+  D  +Y +L
Sbjct: 414 HSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSL 473

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           I     N  +E  ++LL +M   G+  ++   NSI+     SA
Sbjct: 474 IKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSA 516



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 220/457 (48%), Gaps = 17/457 (3%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M R  + PD +++N+++    +    E A +L  EM     + + FTY  L+D +CK  +
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++ A  ++ EM  K +  +VV YST+I G+   G LD    +F EM   GI  + V Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +++ + K G + EA  V   M   GI+ D  TY  ++GG  K G+  +   +F+ M    
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P+ +TY+ LI+   K G   +A +IF    + G + +VV Y+ LI  LC NG ++ A+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 530 SLLDEMTKEG--IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
            L   + ++G  + P+V+T+N++I    +    +  V ++   + ++    NL   C   
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAV-EIYDTMIERGSFGNL-FTCHIL 298

Query: 588 DKDVQEAGRTDNQI-----IKVFGQLVAEKAGQGKKENRCRQEILCIL-GVFQKMHKLKI 641
             +  ++G  D  +     +   G + +        +  C+  +L    G+F +M    +
Sbjct: 299 IGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGL 358

Query: 642 KPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALS 699
            P +  ++ ++ +  + +S E A  L +E++  + +   ++  +++    +      A  
Sbjct: 359 SPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKE 418

Query: 700 LFDEVKLM----DSSTASAFYNALTDMLWHFGQKRGA 732
           L ++++ M    D+ T S+F N L+  L    + +GA
Sbjct: 419 LLNDMQQMGLTPDAYTYSSFINRLSK-LGQMEEAKGA 454



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 204/434 (47%), Gaps = 25/434 (5%)

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
           MKR N+ P++V+YN +I+   K     +  V++  +M  +  +P+  T+  L+  +C  G
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEK-RLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEG 59

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            + EA R L  EM  +G++ D+  Y+TL+   C    +D    +  EM  K ISPNVV Y
Sbjct: 60  RVEEAMR-LLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVY 118

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           S +I+G+ K G   +A  +   M   GI  D  +Y  ++    K GR  +AL +   M  
Sbjct: 119 SCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTE 178

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G     VTYN L+ G  K+G   +  ++FE M        +++Y+TLI      G   E
Sbjct: 179 KGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDE 238

Query: 493 AMQIFREFKQAG--LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           AM++F    + G  ++ DV+ ++ +I  LCK G ++ AV + D M + G   N+ T + +
Sbjct: 239 AMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHIL 298

Query: 551 IDAFGRSATTECTVDDVER--DLGKQKESAN----LDAMCSQDDKDVQEAGRTDNQIIKV 604
           I  + +S   +  ++  +R   LG    S      +D  C     +  +   +  +I  +
Sbjct: 299 IGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGL 358

Query: 605 ------FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
                 +  L+A    +   E   R        +FQ+M +   +P+ ++F+ +++   + 
Sbjct: 359 SPTLFDYNTLMASLCKESSLEQARR--------LFQEMKESNCEPDTISFNIMIDGTLKA 410

Query: 659 NSFEDASMLLEELR 672
                A  LL +++
Sbjct: 411 GDIHSAKELLNDMQ 424



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 76/188 (40%), Gaps = 36/188 (19%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S MI    ++  ++ AK +F      G   T++ ++ L+++  +    ++A  +F  MK 
Sbjct: 331 SVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKE 390

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEI------------------------------ 286
            N +P+ +++N +ID   K G D     E+                              
Sbjct: 391 SNCEPDTISFNIMIDGTLKAG-DIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQME 449

Query: 287 -----FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
                FD M+ +G+ PD   ++SL+         E   NL  +M   G+  D+   N++L
Sbjct: 450 EAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSIL 509

Query: 342 DAICKGAQ 349
             +C  A+
Sbjct: 510 TFLCNSAE 517



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 41/253 (16%)

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
            K+  +  D+V Y+ +I+ LCK   +E AV LL EM      PN  TY  ++D   +   
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCK--- 57

Query: 560 TECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
            E  V++  R LG+ K                ++    D   + V+  L++    +G  +
Sbjct: 58  -EGRVEEAMRLLGEMK----------------RKGLEVD---VVVYSTLISGFCSKGCLD 97

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL--RLFDNQ 677
              R + L     F +M +  I PNVV +S ++N   +   + +A+ +L  +  R     
Sbjct: 98  ---RGKAL-----FDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPD 149

Query: 678 VYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA--- 732
           VY   +  ++G   +D    +AL LFD +       ++  YN L + L   G    A   
Sbjct: 150 VY--TYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKI 207

Query: 733 -QLVVLEGKRRQV 744
            + ++ +GKR +V
Sbjct: 208 FETMLEKGKRLEV 220


>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
 gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
          Length = 546

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 216/448 (48%), Gaps = 42/448 (9%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           + FS LIS YGR+   ++A+     M+   +KP+LV ++ +I+  GK   D+     +F 
Sbjct: 61  FTFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVK-DYSKATSLFS 119

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            +  +G+ PD++ +NS++ +  +   ++ A+ L  EM   G+  D  +Y  L++A  +  
Sbjct: 120 KLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQ 179

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM-KFLGIGLDRVSY 407
           +   A ++  EM  K I  +V T + MID Y K   + DA  +F  M K LGI  + V+Y
Sbjct: 180 KYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTY 239

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSG-IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           NT++ +Y +     EA  V   M++ G +  + +TYN +L  +G   ++++  R+  +M+
Sbjct: 240 NTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQ 299

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + PN +TYSTLI +Y K G Y  A  +F+  ++ G + D +LY ++I    + GLV 
Sbjct: 300 QRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVA 359

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKESANLDAMC 584
            A  LL+E+ +    P++V  ++ I    ++   E       R  + G+ KES    +M 
Sbjct: 360 HAKRLLEELKQ----PDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSM- 414

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
                            I++F            +  R +  I     VF+ M +    P+
Sbjct: 415 -----------------IQLF-----------MRNKRSKNAI----DVFENMRESGFLPD 442

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELR 672
             T   +L A  +    EDA  L  ++R
Sbjct: 443 SETTVVLLAAYGQLRQLEDAEKLYLDMR 470



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 185/374 (49%), Gaps = 7/374 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +IS  GR  +++ A    +     G    +  FS LI   G+     +A S+F+ +K 
Sbjct: 64  STLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKA 123

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P+ V YN++I+  GK    +K    +  +M   G+ PD +++  L+   +    + 
Sbjct: 124 SGIAPDKVIYNSMINLYGKAKF-YKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYL 182

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYSTM 375
            A+ +F EM  +GI  D+ T N ++D   K   +  A E+   M     I  NVVTY+TM
Sbjct: 183 EAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTM 242

Query: 376 IDGYAKAGRLDDALNMFSEMKFL-GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           I  Y +A  L +A N+F  M+   G+  + ++YNT+L ++    + E+A+ + ++M+  G
Sbjct: 243 IKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRG 302

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I  +AVTY+ L+  YGK GKYD    +F+ ++      + + Y ++I VY + GL   A 
Sbjct: 303 IEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAK 362

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++  E KQ     D+V     I  L K   +E A  L     + G     VTY S+I  F
Sbjct: 363 RLLEELKQ----PDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLF 418

Query: 555 GRSATTECTVDDVE 568
            R+  ++  +D  E
Sbjct: 419 MRNKRSKNAIDVFE 432



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 185/361 (51%), Gaps = 34/361 (9%)

Query: 315 WEAARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           W+ +  L + M+ +G     IF YN +L  + +  Q +LA  ++ EM  K++ P+  T+S
Sbjct: 5   WQRSLALHDWMIEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFS 64

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+I GY +A RL+DA+    EM+  GI  D V ++T++ +  K+  + +A  +  ++++S
Sbjct: 65  TLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKAS 124

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI  D V YN+++  YGK   Y E + +  +MK   + P+ ++Y+ LI+ Y++   Y EA
Sbjct: 125 GIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEA 184

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE-GIRPNVVTYNSIID 552
            Q+F E K  G++ DV   + +ID   K  +V  A  L   M+K  GI+ NVVTYN++I 
Sbjct: 185 KQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIK 244

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG-QLVAE 611
            +  +                  E+ N+     Q+   V+    T N I+ + G  L  E
Sbjct: 245 VYKEAELL--------------SEAFNV-FYYMQNKGGVEPNVITYNTILFLHGLTLQHE 289

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           KA                + + +KM +  I+PN VT+S +++   +   ++ A+ L + L
Sbjct: 290 KA----------------MRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTL 333

Query: 672 R 672
           R
Sbjct: 334 R 334



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 154/276 (55%), Gaps = 3/276 (1%)

Query: 279 DFKHVVEIFDDML-RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           D++  + + D M+ + G  P    +N +L    R   WE A  L  EMV + +  D FT+
Sbjct: 4   DWQRSLALHDWMIEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTF 63

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           +TL+    +  +++ A   + EM A  I P++V +ST+I+   K      A ++FS++K 
Sbjct: 64  STLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKA 123

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI  D+V YN+++++Y K   ++EA  +  EM+ +G+  D V+Y  L+  Y +  KY E
Sbjct: 124 SGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLE 183

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF-KQAGLKADVVLYSALI 516
            +++F +MK   +  ++ T + +IDVY K  + ++A ++F    K  G++ +VV Y+ +I
Sbjct: 184 AKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMI 243

Query: 517 DALCKNGLVESAVSLLDEM-TKEGIRPNVVTYNSII 551
               +  L+  A ++   M  K G+ PNV+TYN+I+
Sbjct: 244 KVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTIL 279



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 182/362 (50%), Gaps = 7/362 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I + G++     A ++F      G       ++++I+ YG++ + +EA  +   MK 
Sbjct: 99  STLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKE 158

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P+ V+Y  +I+A  +    +    ++F +M   G+Q D  T N ++ V  +  +  
Sbjct: 159 AGLMPDTVSYTILINAYAESQ-KYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVR 217

Query: 317 AARNLFNEMVHR-GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYST 374
            A  LF  M    GI Q++ TYNT++    +   +  AF +   M  K  + PNV+TY+T
Sbjct: 218 DAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNT 277

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++  +    + + A+ +  +M+  GI  + V+Y+T++SIY K G+++ A  + K +   G
Sbjct: 278 ILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKG 337

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D + Y +++  Y + G     +R+ E++K     P+++   T I + +K    +EA 
Sbjct: 338 FEMDEILYQSMIVVYERAGLVAHAKRLLEELK----QPDIVPRDTAISILAKAEKLEEAA 393

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +++    +AG   + V Y ++I    +N   ++A+ + + M + G  P+  T   ++ A+
Sbjct: 394 KLYWRSHEAGEIKESVTYKSMIQLFMRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAY 453

Query: 555 GR 556
           G+
Sbjct: 454 GQ 455



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 157/341 (46%), Gaps = 34/341 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI++ G+      A+ +       G      +++ LI+AY  S    EA  VF  MK 
Sbjct: 134 NSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKT 193

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLW 315
             ++ ++ T N +ID  GK  +  +   E+F  M +  G+Q + +T+N+++ V     L 
Sbjct: 194 KGIQLDVTTCNMMIDVYGKLEM-VRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELL 252

Query: 316 EAARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             A N+F  M ++G ++ ++ TYNT+L       Q + A  ++ +M  + I PN VTYST
Sbjct: 253 SEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYST 312

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY--------------------------- 407
           +I  Y K G+ D A  +F  ++  G  +D + Y                           
Sbjct: 313 LISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPD 372

Query: 408 ----NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
               +T +SI AK  + EEA  +      +G  K++VTY +++  + +  +      +FE
Sbjct: 373 IVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNKRSKNAIDVFE 432

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
            M+     P+  T   L+  Y +    ++A +++ + ++ G
Sbjct: 433 NMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERG 473



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 161/341 (47%), Gaps = 12/341 (3%)

Query: 199 MISILGRLGKVDLAKNIF-ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK-R 256
           MI + G+L  V  A+ +F   +   G    V  ++ +I  Y  +    EA +VF  M+ +
Sbjct: 206 MIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNK 265

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKH--VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
             ++PN++TYN ++   G   +  +H   + +   M + G++P+ +T+++L+++  + G 
Sbjct: 266 GGVEPNVITYNTILFLHG---LTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGK 322

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           ++ A  LF  +  +G + D   Y +++    +   +  A  ++ E+      P++V   T
Sbjct: 323 YDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELK----QPDIVPRDT 378

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
            I   AKA +L++A  ++      G   + V+Y +++ ++ +  R + A+ V + M  SG
Sbjct: 379 AISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNKRSKNAIDVFENMRESG 438

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D+ T   LL  YG+  + ++  +++  M+    +     +  ++ +Y      +EA 
Sbjct: 439 FLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGDARKIREAE 498

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
            +F   K  GL  D  LY  +I    +   +  A  L  EM
Sbjct: 499 DMFAALKLEGLDGD-ELYLTMIRIYERASKLNEASRLFSEM 538



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 33/231 (14%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +ISI G+ GK D A  +F+T   +G+      + ++I  Y R+G    A  +   +K+
Sbjct: 311 STLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQ 370

Query: 257 YNLKP-------------------------------NLVTYNAVIDACGKGGVDFKHVVE 285
            ++ P                                 VTY ++I    +     K+ ++
Sbjct: 371 PDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNKRS-KNAID 429

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +F++M  +G  PD  T   LLA   +    E A  L+ +M  RG   +   +  +L    
Sbjct: 430 VFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYG 489

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
              ++  A ++ A +  + +  + + Y TMI  Y +A +L++A  +FSEMK
Sbjct: 490 DARKIREAEDMFAALKLEGLDGDEL-YLTMIRIYERASKLNEASRLFSEMK 539


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 170/328 (51%), Gaps = 3/328 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  ++ LI    +    QEA+     M      P+  TYN +ID   K  +  +   E+ 
Sbjct: 255 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM-VQEATELL 313

Query: 288 DDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
            D +  G  PD++T+ SL+  +C+ G + E A  LFNE   +GI  DI  YN+L+  +C 
Sbjct: 314 KDAVFKGFVPDQVTYCSLINGLCAEGDV-ERALELFNEAQAKGIKPDIVVYNSLVKGLCL 372

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +  A ++M EM  +   P++ TY+ +I+G  K G + DA  + ++    G   D  +
Sbjct: 373 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 432

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +NT++  Y K  + + AL + + M   GI  D +TYN++L G  K GK +EV   F++M 
Sbjct: 433 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 492

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
                PN +TY+ LI+ + +    +EA ++  +  Q GL  D V ++ LI   C+NG +E
Sbjct: 493 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 552

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            A  L  ++ ++G      T+N++I AF
Sbjct: 553 GAYLLFQKLEEKGYSATADTFNTLIGAF 580



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 189/352 (53%), Gaps = 5/352 (1%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++  V  A  + + A+ +G+      + +LI+     G  + A+ +FN  +   +KP++V
Sbjct: 302 KISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIV 361

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
            YN+++   C +G +   H +++ ++M   G  PD  T+N ++  +C  G + +A   + 
Sbjct: 362 VYNSLVKGLCLQGLI--LHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATV-VM 418

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           N+ + +G   D+FT+NTL+D  CK  ++D A +++  M    I+P+ +TY+++++G  KA
Sbjct: 419 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 478

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G++++    F EM   G   + ++YN ++  + +  + EEA  V  +M   G+  DAV++
Sbjct: 479 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 538

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           N L+ G+ + G  +    +F++++    S    T++TLI  +S       A +IF E   
Sbjct: 539 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 598

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            G +AD   Y  LID  CK   V+ A   L EM K+G  P++ T+  +I++ 
Sbjct: 599 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 650



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 176/351 (50%), Gaps = 3/351 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A +     +N+G     + ++ +I  Y +    QEA  +          P+ VTY ++I+
Sbjct: 274 AMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 333

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
             C +G  D +  +E+F++    G++PD + +NSL+      GL   A  + NEM   G 
Sbjct: 334 GLCAEG--DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC 391

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             DI TYN +++ +CK   +  A  +M +   K   P+V T++T+IDGY K  +LD AL 
Sbjct: 392 HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQ 451

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +   M   GI  D ++YN+VL+   K G+  E     +EM   G   + +TYN L+  + 
Sbjct: 452 LVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFC 511

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           +  K +E  ++  +M  + + P+ ++++TLI  + + G  + A  +F++ ++ G  A   
Sbjct: 512 RSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATAD 571

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            ++ LI A      +  A  + DEM  +G R +  TY  +ID   ++A  +
Sbjct: 572 TFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 622



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 239/522 (45%), Gaps = 55/522 (10%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L  A I    R G++  A + FE            A++A++ A   + Y  +A  V+  M
Sbjct: 52  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 111

Query: 255 KRYNLKPNLVTYNAVIDA-C----------------GKGGVDFKHVV------------- 284
               + P+L T+   + + C                 +G V +  VV             
Sbjct: 112 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDAR 171

Query: 285 EIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           ++FD ML   V P+   FN +L A+C RG + EA   L  +++ RG+  ++FTYN  +  
Sbjct: 172 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL-LLGKVIQRGMSINLFTYNIWIRG 230

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +C+  ++  A  ++  M A  + P+VVTY+T+I G  K     +A++    M   G   D
Sbjct: 231 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 289

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +YNT++  Y K+   +EA  + K+    G   D VTY +L+ G   +G  +    +F 
Sbjct: 290 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 349

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           + +A  + P+++ Y++L+      GL   A+Q+  E  + G   D+  Y+ +I+ LCK G
Sbjct: 350 EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMG 409

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKESAN-- 579
            +  A  ++++   +G  P+V T+N++ID + +    +  +  VER  + G   ++    
Sbjct: 410 NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 469

Query: 580 --LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK------KENRCRQEILCILG 631
             L+ +C        +AG+  N++ + F +++ +             EN CR   +    
Sbjct: 470 SVLNGLC--------KAGKV-NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 520

Query: 632 -VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            V  KM +  + P+ V+F+ ++    R    E A +L ++L 
Sbjct: 521 KVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 562



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 174/357 (48%), Gaps = 5/357 (1%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++I+ L   G V+ A  +F  A  +G    +  +++L+      G    A+ V N M   
Sbjct: 330 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 389

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
              P++ TYN VI+   K G +      + +D +  G  PD  TFN+L+   C R  L +
Sbjct: 390 GCHPDIQTYNIVINGLCKMG-NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL-D 447

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +A  L   M   GI  D  TYN++L+ +CK  +++   E   EM  K   PN +TY+ +I
Sbjct: 448 SALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 507

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           + + ++ ++++A  +  +M   G+  D VS+NT++  + + G  E A L+ +++E  G  
Sbjct: 508 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYS 567

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             A T+N L+G +  +       ++F++M +     +  TY  LID   K      A   
Sbjct: 568 ATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMH 627

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             E  + G    +  +  +I++L  N  V  AV ++  M K G+ P VV  ++I++A
Sbjct: 628 LVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNA 682



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 1/204 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++++ L + GKV+     F+  + +G       ++ LI  + RS   +EA  V   M +
Sbjct: 469 NSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ 528

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P+ V++N +I    + G D +    +F  +   G      TFN+L+   S      
Sbjct: 529 EGLHPDAVSFNTLIYGFCRNG-DLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 587

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +F+EM+ +G   D +TY  L+D  CK A +D A+  + EM  K   P++ T+  +I
Sbjct: 588 MAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVI 647

Query: 377 DGYAKAGRLDDALNMFSEMKFLGI 400
           +      R+  A+ +   M  +G+
Sbjct: 648 NSLTVNHRVFQAVGIIHIMVKIGV 671


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 177/315 (56%), Gaps = 8/315 (2%)

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           ++A+  F  MK   ++P+L +Y+ ++ A    G        +F  M      PD +T+N 
Sbjct: 158 EQAMEFFKEMKASGVEPDLESYHILLSALSDSG-RMAEAHALFSAMT---CSPDIMTYNV 213

Query: 305 LL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
           L+   C  G  +EA ++L  E++  G + ++FTY+ +++  CK  +++ A+E+  +M   
Sbjct: 214 LMDGYCKIGQTYEA-QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIES 272

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL-SIYAKLGRFEE 422
           N  PN VT++T+I G+ KAG L+DA+ +F+EM+ +G     V+YNT++ S+  K G    
Sbjct: 273 NCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYT 332

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A+ +  ++E +G+    VTYN+L+ G+    +  E  + F++M+  C +PN++TYS LID
Sbjct: 333 AVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKC-APNVITYSILID 391

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
              K    KEA +   + K  G    VV Y  LI+  CK G ++SA+   ++M   G  P
Sbjct: 392 GLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAP 451

Query: 543 NVVTYNSIIDAFGRS 557
           N V +N++ID   ++
Sbjct: 452 NTVIFNTLIDGLCKA 466



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 144/533 (27%), Positives = 244/533 (45%), Gaps = 65/533 (12%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISIL---GRLGKVDLA 212
           A  Y  L+R     G+  +A+  F+     + + +     AS M ++L     +G++  A
Sbjct: 32  AHTYNVLIRGFCKGGQMHQAVSVFS-----DMKSSGLLPNASTMNTLLLGLCEIGQMSSA 86

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
             +F       +  T  + + L+  +  +G  ++A++    M++ +      TYN V+  
Sbjct: 87  LKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKG 146

Query: 273 -C--GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
            C   K     +  +E F +M  +GV+PD  +++ LL+  S  G    A  LF+ M    
Sbjct: 147 LCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT--- 203

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
              DI TYN L+D  CK  Q   A  +M E+      PNV TYS +I+ Y K  ++++A 
Sbjct: 204 CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAW 263

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
            +F +M       + V++NT+++ + K G  E+A+ +  EME  G +   VTYN L+   
Sbjct: 264 EVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSL 323

Query: 450 GKQ--GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
            K+  G Y  V  +F +++   ++P ++TY++LI  +       EAMQ F E  +     
Sbjct: 324 CKKRGGVYTAVD-LFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAP 381

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           +V+ YS LID LCK   ++ A   L++M   G  P VVTY  +I+ F +    +  +   
Sbjct: 382 NVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFF 441

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV-----AEKAGQGKKENRC 622
           E+                     ++ AG   N +I  F  L+     AE+A  G +    
Sbjct: 442 EK---------------------MKLAGCAPNTVI--FNTLIDGLCKAERANDGLR---- 474

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 675
              +LC       MH    KP+V+T++ +++     N  EDA       RLFD
Sbjct: 475 ---LLC------HMHAEGCKPDVITYNCLISGLCSANRVEDAQ------RLFD 512



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 168/326 (51%), Gaps = 8/326 (2%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           +  ++ L+  Y + G   EA S+   + +   +PN+ TY+ +I+  C    V+     E+
Sbjct: 208 IMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVE--EAWEV 265

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F  M+ +   P+ +TFN+L+A   + G+ E A  LF EM   G    I TYNTL+D++CK
Sbjct: 266 FMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK 325

Query: 347 G-AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
               +  A ++  ++    ++P +VTY+++I G+  A RL +A+  F EM+      + +
Sbjct: 326 KRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEG-KCAPNVI 384

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y+ ++    K+ R +EA    ++M++ G     VTY  L+ G+ K G+       FE+M
Sbjct: 385 TYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKM 444

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           K    +PN + ++TLID   K     + +++       G K DV+ Y+ LI  LC    V
Sbjct: 445 KLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRV 504

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSII 551
           E A  L D M      PNV T+N +I
Sbjct: 505 EDAQRLFDGM---ACAPNVTTFNFLI 527



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 230/484 (47%), Gaps = 20/484 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A++S L    K D A  +F+  L   +    + ++ LI  + + G   +A+SVF+ MK 
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L PN  T N ++    + G      +++F +M      P   + N LL      G   
Sbjct: 61  SGLLPNASTMNTLLLGLCEIG-QMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAIC----KGAQMDLAFEIMAEMPAKNISPNVVTY 372
            A     +M          TYN +L  +C       +++ A E   EM A  + P++ +Y
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
             ++   + +GR+ +A  +FS M       D ++YN ++  Y K+G+  EA  + KE+  
Sbjct: 180 HILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 236

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYK 491
           +G   +  TY+ ++  Y K  K +E   +F +M +++CV PN +T++TLI  + K G+ +
Sbjct: 237 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCV-PNAVTFNTLIAGFCKAGMLE 295

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKN-GLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           +A+++F E ++ G KA +V Y+ LID+LCK  G V +AV L +++   G+ P +VTYNS+
Sbjct: 296 DAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSL 355

Query: 551 IDAFG---RSATTECTVDDVERDLGKQ--KESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
           I  F    R +      D++E          S  +D +C    + ++EA +T    +K  
Sbjct: 356 IQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDGLCKV--RRMKEAAKTLED-MKAH 412

Query: 606 GQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
           G         G     C+  E+   L  F+KM      PN V F+ +++   +     D 
Sbjct: 413 GYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDG 472

Query: 665 SMLL 668
             LL
Sbjct: 473 LRLL 476



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 175/331 (52%), Gaps = 8/331 (2%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++G+   A+++ +  L  GY   V+ +S +I+ Y +    +EA  VF  M   N  PN V
Sbjct: 220 KIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAV 279

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVC-SRGGLWEAARNLF 322
           T+N +I    K G+  +  +++F +M + G +   +T+N+L+ ++C  RGG++ A  +LF
Sbjct: 280 TFNTLIAGFCKAGM-LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAV-DLF 337

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           N++   G+   I TYN+L+   C   ++  A +   EM  K  +PNV+TYS +IDG  K 
Sbjct: 338 NKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKV 396

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
            R+ +A     +MK  G     V+Y  +++ + K G  + ALL  ++M+ +G   + V +
Sbjct: 397 RRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIF 456

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           N L+ G  K  + ++  R+   M A+   P+++TY+ LI         ++A ++F     
Sbjct: 457 NTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMAC 516

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           A    +V  ++ LI  LC    VE A ++LD
Sbjct: 517 A---PNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 154/288 (53%), Gaps = 10/288 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+   +L KV+ A  +F   +          F+ LI+ + ++G  ++AI +F  M++
Sbjct: 247 SIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEK 306

Query: 257 YNLKPNLVTYNAVIDA-CGK-GGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGG 313
              K  +VTYN +ID+ C K GGV     V++F+ +   G+ P  +T+NSL+   C    
Sbjct: 307 IGCKATIVTYNTLIDSLCKKRGGV--YTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARR 364

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           L EA +  F+EM  +    ++ TY+ L+D +CK  +M  A + + +M A   +P VVTY 
Sbjct: 365 LSEAMQ-YFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYG 422

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I+G+ K G L  AL  F +MK  G   + V +NT++    K  R  + L +   M + 
Sbjct: 423 GLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAE 482

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           G + D +TYN L+ G     + ++ +R+F+ M     +PN+ T++ LI
Sbjct: 483 GCKPDVITYNCLISGLCSANRVEDAQRLFDGMAC---APNVTTFNFLI 527



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 147/335 (43%), Gaps = 53/335 (15%)

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           NALL G     K+D+  R+F+++ A   +PN  TY+ LI  + KGG   +A+ +F + K 
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GR--- 556
           +GL  +    + L+  LC+ G + SA+ L  EM      P   ++N ++  F   GR   
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 557 ------------SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
                       S+    T + V + L  + +SAN      +  K+++ +G   +  ++ 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPD--LES 178

Query: 605 FGQLVAEKAGQGKKEN--------RCRQEIL---------CILG-------VFQKMHKLK 640
           +  L++  +  G+            C  +I+         C +G       + +++ K  
Sbjct: 179 YHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAG 238

Query: 641 IKPNVVTFSAILNACSRCNSFEDA---SMLLEELRLFDNQVYGVAHGLLMGY-RDNIWVQ 696
            +PNV T+S I+N   + +  E+A    M + E     N V    + L+ G+ +  +   
Sbjct: 239 YEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAV--TFNTLIAGFCKAGMLED 296

Query: 697 ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRG 731
           A+ LF E++ +        YN L D L    +KRG
Sbjct: 297 AIKLFAEMEKIGCKATIVTYNTLIDSLC---KKRG 328


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 187/397 (47%), Gaps = 6/397 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT +L+ L     W      FA  V ++   N+       ++    R G V+ A  + + 
Sbjct: 260 YTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNE--VTFDMLVRFFCRGGMVERAIQVLQQ 317

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G        + +I+A  + G   +A    N+M  Y   P+ ++Y  V+    + G 
Sbjct: 318 MSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAG- 376

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            ++H  E+  +M+R    P+ +TFN+ + +  + GL E A  L   M   G    I TYN
Sbjct: 377 RWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYN 436

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+   C   ++D A E+   +P +   PN +TY+T++ G   A RLD A  + +EM   
Sbjct: 437 ALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMIQK 493

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
              L+ V++N ++S + + G  EEA+ +  +M   G   + +T+N LL G  K    +E 
Sbjct: 494 DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEA 553

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +   + +  VS + +TYS+++DV S+    +EA+Q+    +  G++  V +Y+ ++ A
Sbjct: 554 LELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFA 613

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           LCK    + A+     M   G  PN  TY  +I+   
Sbjct: 614 LCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLA 650



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 175/351 (49%), Gaps = 6/351 (1%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A N+ +    +G    +  ++ +I+   R G   +A  + N +  Y  +P++V+Y  V+ 
Sbjct: 206 AMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLK 265

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
             C     D   V  +F +M+     P+ +TF+ L+    RGG+ E A  +  +M   G 
Sbjct: 266 GLCAARRWDDVKV--LFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGC 323

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             +    N +++AICK  ++D A++ +  M     +P+ ++Y+T++ G  +AGR + A  
Sbjct: 324 TPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKE 383

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +  EM       + V++NT + I  + G  E+A+ + + M   G     VTYNAL+ G+ 
Sbjct: 384 LLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFC 443

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
            QG+ D    +F  +  +   PN +TY+TL+           A ++  E  Q     + V
Sbjct: 444 VQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAV 500

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            ++ L+   C+ G VE A+ L+++M + G  PN++T+N+++D   +   +E
Sbjct: 501 TFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSE 551



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 227/513 (44%), Gaps = 30/513 (5%)

Query: 58  SPRNAPKPAATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAM 117
           +PR A  P   S    P P P       PSS +    + S  RS          +P +  
Sbjct: 138 TPRAASSPPCPSR---PTPTPTR-----PSSGASATAEGSATRSPCSTMLQRGCQPSVVT 189

Query: 118 STRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGAD--DYTFLLRELGNRGEWSKA 175
            T    V  EA+   + F        ++L +   K C  +   Y  ++  +   G    A
Sbjct: 190 YT----VLLEAVCKSSGFGE----AMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 241

Query: 176 IQCFAFAVKREERKNDQGKLASAMISILGRLG--KVDLAKNIFETALNEGYGNTVYAFSA 233
            +     + R      Q  + S    + G     + D  K +F   +++        F  
Sbjct: 242 KE----ILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLR 292
           L+  + R G  + AI V   M ++   PN    N VI+A C +G VD  +  +  ++M  
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY--DFLNNMGM 355

Query: 293 NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL 352
            G  PD I++ ++L    R G WE A+ L  EMV +    +  T+NT +  +C+   ++ 
Sbjct: 356 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 415

Query: 353 AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS 412
           A +++  MP    S  +VTY+ ++ G+   GR+D AL +F+    L    + ++Y T+L+
Sbjct: 416 AIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN---LPCEPNTITYTTLLT 472

Query: 413 IYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP 472
                 R + A  +  EM       +AVT+N L+  + ++G  +E   +  QM     +P
Sbjct: 473 GLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 532

Query: 473 NLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           NL+T++TL+D  +K    +EA+++       G+  D + YS+++D L +    E A+ +L
Sbjct: 533 NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQML 592

Query: 533 DEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
             +   G+RP V  YN I+ A  +   T+  +D
Sbjct: 593 HAVQDMGMRPKVGMYNKILFALCKRCETDQAID 625



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 191/421 (45%), Gaps = 38/421 (9%)

Query: 249 SVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA 307
           S  ++M +   +P++VTY  +++A C   G  F   + + D+M   G  P+ +T+N ++ 
Sbjct: 173 SPCSTMLQRGCQPSVVTYTVLLEAVCKSSG--FGEAMNVLDEMRAKGCTPNIVTYNVIIN 230

Query: 308 VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
              R G  + A+ + N +   G   DI +Y T+L  +C   + D    + AEM  K   P
Sbjct: 231 GMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVP 290

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           N VT+  ++  + + G ++ A+ +  +M   G   +    N V++   K GR ++A    
Sbjct: 291 NEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFL 350

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
             M   G   D ++Y  +L G  + G+++  + +  +M      PN +T++T I +  + 
Sbjct: 351 NNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQK 410

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           GL ++A+++     + G    +V Y+AL+   C  G V+SA+ L + +  E   PN +TY
Sbjct: 411 GLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITY 467

Query: 548 NSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
            +++     +                ++  A  + +     KD      T N ++  F Q
Sbjct: 468 TTLLTGLCHA----------------ERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQ 511

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR-CNSFEDASM 666
                  +G  E          + +  +M +    PN++TF+ +L+  ++ CNS E   +
Sbjct: 512 -------KGFVEEA--------MELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALEL 556

Query: 667 L 667
           L
Sbjct: 557 L 557



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 153/310 (49%), Gaps = 6/310 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R G+ + AK +    + +        F+  I    + G  ++AI +   M  Y     
Sbjct: 372 LCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVG 431

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +VTYNA++   C +G VD    +E+F+++     +P+ IT+ +LL         +AA  L
Sbjct: 432 IVTYNALVHGFCVQGRVD--SALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAEL 486

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             EM+ +    +  T+N L+   C+   ++ A E++ +M     +PN++T++T++DG  K
Sbjct: 487 LAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITK 546

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
               ++AL +   +   G+ LD ++Y++V+ + ++  R EEA+ +   ++  G+R     
Sbjct: 547 DCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGM 606

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN +L    K+ + D+    F  M ++   PN  TY  LI+  +  GL KEA  +  E  
Sbjct: 607 YNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELY 666

Query: 502 QAGLKADVVL 511
             G+ +  +L
Sbjct: 667 AKGVLSKSLL 676



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/368 (21%), Positives = 169/368 (45%), Gaps = 9/368 (2%)

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M  +   P+VVTY+ +++   K+    +A+N+  EM+  G   + V+YN +++   + GR
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            ++A  +   + S G + D V+Y  +L G     ++D+V+ +F +M      PN +T+  
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           L+  + +GG+ + A+Q+ ++  Q G   +  L + +I+A+CK G V+ A   L+ M   G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 540 IRPNVVTYNSIIDAFGRSA----TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
             P+ ++Y +++    R+       E   + V ++    + + N   +C    K + E  
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFN-TFICILCQKGLIEQA 416

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
               +++  +G  V            C Q    +    +  + L  +PN +T++ +L   
Sbjct: 417 IKLIELMPEYGCSVGIVTYNALVHGFCVQGR--VDSALELFNNLPCEPNTITYTTLLTGL 474

Query: 656 SRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RDNIWVQALSLFDEVKLMDSSTAS 713
                 + A+ LL E+   D  +  V   +L+ +  +     +A+ L +++     +   
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 534

Query: 714 AFYNALTD 721
             +N L D
Sbjct: 535 ITFNTLLD 542


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 220/447 (49%), Gaps = 26/447 (5%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFA-----FAVKREERKNDQGKLASAMISILGRLGKVDLA 212
           ++  + R  G      KAI+ F      F  +R  R        +++++++ + G    A
Sbjct: 101 NFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRS------FNSVLNVIIQEGLFHRA 154

Query: 213 KNIFETAL--NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
              +E  +         V +F+ +I A  + G    AI VF  M     +P++ TY  ++
Sbjct: 155 LEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLM 214

Query: 271 DA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHR 328
           D  C +  +D    V + D+M   G  P  +TFN L+  +C +G +    + L + M  +
Sbjct: 215 DGLCKEDRID--EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTK-LVDNMFLK 271

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   +  TYNT+++ +C   ++D A  ++  M A    PN VTY T+I+G  K GR  D 
Sbjct: 272 GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDG 331

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           +++ S ++  G   +  +Y+T++S   K  + EEA+ + K+M   G + + V Y+AL+ G
Sbjct: 332 VHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDG 391

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             ++GK DE + +  +M     +PN  TYS+LI  + K G  ++A+++++E  +     +
Sbjct: 392 LCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPN 451

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            + YS LI  LC++G +  A+ +   M   G+RP+VV Y+S+I     + + E  +    
Sbjct: 452 EICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFN 511

Query: 569 RDLGKQKESAN--------LDAMCSQD 587
             L ++ +S          L A+C Q+
Sbjct: 512 EMLCQESDSQPDVVTYNILLRALCKQN 538



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 227/461 (49%), Gaps = 32/461 (6%)

Query: 231 FSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           F  +  AYG++   ++AI +F  M   +  +  + ++N+V++   + G+ F   +E ++ 
Sbjct: 102 FILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGL-FHRALEFYEC 160

Query: 290 ML--RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            +  +  + P+ ++FN ++    + GL + A  +F EM  +  + D+FTY TL+D +CK 
Sbjct: 161 GVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKE 220

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            ++D A  ++ EM  +   P+ VT++ +I+G  K G +     +   M   G   + V+Y
Sbjct: 221 DRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTY 280

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           NT+++     G+ ++A+ +   M +S    + VTY  L+ G  KQG+  +   +   ++ 
Sbjct: 281 NTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEE 340

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
                N   YSTLI    K    +EAM ++++  + G + ++V+YSALID LC+ G ++ 
Sbjct: 341 RGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDE 400

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------L 580
           A  +L EM  +G  PN  TY+S+I  F ++  ++  +  V +++ K     N       +
Sbjct: 401 AKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIR-VWKEMAKNNCVPNEICYSVLI 459

Query: 581 DAMCSQDDKDVQEA--------GRTDNQIIKVFGQLVAEKAGQGKKENRCR--QEILCIL 630
             +C  +D  ++EA        GR     +  +  ++      G  E   +   E+LC  
Sbjct: 460 HGLC--EDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLC-- 515

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                  +   +P+VVT++ +L A  + NS   A  LL  +
Sbjct: 516 ------QESDSQPDVVTYNILLRALCKQNSISHAIDLLNSM 550



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 186/394 (47%), Gaps = 40/394 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  + +LG VD A  +F     +     V+ +  L+    +     EA+ + + M+   
Sbjct: 178 VIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEG 237

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
             P+ VT+N +I+   K G D   V ++ D+M   G  P+ +T+N+++  +C +G L + 
Sbjct: 238 CFPSSVTFNVLINGLCKKG-DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL-DK 295

Query: 318 ARNLFNEMV-----------------------------------HRGIDQDIFTYNTLLD 342
           A +L + MV                                    RG   + + Y+TL+ 
Sbjct: 296 AVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLIS 355

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            + K  + + A  +  +M  K   PN+V YS +IDG  + G+LD+A  +  EM   G   
Sbjct: 356 GLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTP 415

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           +  +Y++++  + K G  ++A+ V KEM  +    + + Y+ L+ G  + GK  E   M+
Sbjct: 416 NAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMW 475

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF--KQAGLKADVVLYSALIDALC 520
             M    + P+++ YS++I      G  +  +++F E   +++  + DVV Y+ L+ ALC
Sbjct: 476 THMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALC 535

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           K   +  A+ LL+ M   G  P+++T N  ++A 
Sbjct: 536 KQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 569



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 167/410 (40%), Gaps = 70/410 (17%)

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           T+ ++I+     G DF  + ++FD M R         F  +     +  L E A  LF  
Sbjct: 66  TFYSLIENYANSG-DFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGR 124

Query: 325 MVHR-GIDQDIFTYNTLLDAICKGAQMDLAFEI--MAEMPAKNISPNVVTYSTMIDGYAK 381
           MV      + + ++N++L+ I +      A E          NISPNV+           
Sbjct: 125 MVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVL----------- 173

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
                                   S+N V+    KLG  + A+ V +EM       D  T
Sbjct: 174 ------------------------SFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFT 209

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  L+ G  K+ + DE   + ++M+ +   P+ +T++ LI+   K G      ++     
Sbjct: 210 YCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMF 269

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G   + V Y+ +I+ LC  G ++ AVSLLD M      PN VTY ++I+         
Sbjct: 270 LKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLING-------- 321

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
                    L KQ  S +   + S     ++E G   N+    +  L++    + K E  
Sbjct: 322 ---------LVKQGRSVDGVHLLSS----LEERGHHANEY--AYSTLISGLFKEEKSEEA 366

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                   +G+++KM +   +PN+V +SA+++   R    ++A  +L E+
Sbjct: 367 --------MGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 408


>gi|357462685|ref|XP_003601624.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355490672|gb|AES71875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 241/499 (48%), Gaps = 41/499 (8%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R  +  LA  +F+  L +G     Y +S LI+ + + G    +      M+R N+  +LV
Sbjct: 172 RAKQWQLAHGLFDEMLQKGLSPDKYTYSTLITHFSKQGLFDSSFFWLQQMERDNVSGDLV 231

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNG-VQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            Y+ +I+   K   D+   + IF+ +  +G + PD I  N +++V  +  L+  AR L  
Sbjct: 232 LYSNLIELSRKL-CDYSKAISIFNALKGSGNIVPDLIACNMMISVYGKAKLFREARLLLQ 290

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EM   G++    +Y+TLL       +   A  + +EM       ++ T + MID Y +  
Sbjct: 291 EMRDNGVNPSTASYSTLLAIYVDNQKFVEAVSLFSEMNEVECPIDLTTCNIMIDVYGQLQ 350

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
            + +A   F  M+ +GI  + VSYNTVL +Y + G F EA+ +   M+  G+ ++ VTYN
Sbjct: 351 MIKEADCFFWGMRKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYN 410

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            ++  YGK  ++D+   + ++M++  + PN +TYST+I ++ K G    A  +F + + +
Sbjct: 411 TMISIYGKSLEHDKATNLIQEMQSRGIQPNAITYSTIISIWEKAGKLDRAAMLFHKLRTS 470

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           G+K D +LY  +I A  K GLV  A  LL+E+ +    P+ V+  + I    R+      
Sbjct: 471 GVKIDEILYQTMIVAYQKAGLVAHAKRLLNELKQ----PDNVSRETAITILARA------ 520

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
                   GK  E+  +        +   +AG   +  I VFG ++   + + K  +   
Sbjct: 521 --------GKVDEAMWV-------FRQAFDAGEVKD--ISVFGCIIDIFSRERKYAH--- 560

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVY 679
                ++ VF+KM ++   P+    + +LNA  +   FE A  L +++     +F ++V+
Sbjct: 561 -----VVEVFEKMREVGHFPDSNVIALVLNAFGKLRKFERADALYKQMYEEGCVFPDEVH 615

Query: 680 GVAHGLLMGYRDNIWVQAL 698
               GL     D   V++L
Sbjct: 616 FQMLGLYGARMDFNMVESL 634



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 192/378 (50%), Gaps = 7/378 (1%)

Query: 171 EWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYA 230
           ++SKAI  F  A+K            + MIS+ G+      A+ + +   + G   +  +
Sbjct: 245 DYSKAISIFN-ALKGSGNIVPDLIACNMMISVYGKAKLFREARLLLQEMRDNGVNPSTAS 303

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +S L++ Y  +    EA+S+F+ M       +L T N +ID  G+  +  K     F  M
Sbjct: 304 YSTLLAIYVDNQKFVEAVSLFSEMNEVECPIDLTTCNIMIDVYGQLQM-IKEADCFFWGM 362

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
            + G++P+ +++N++L V    GL+  A +LF+ M  +G+ Q++ TYNT++    K  + 
Sbjct: 363 RKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNTMISIYGKSLEH 422

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           D A  ++ EM ++ I PN +TYST+I  + KAG+LD A  +F +++  G+ +D + Y T+
Sbjct: 423 DKATNLIQEMQSRGIQPNAITYSTIISIWEKAGKLDRAAMLFHKLRTSGVKIDEILYQTM 482

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +  Y K G    A  +  E++    + D V+    +    + GK DE   +F Q      
Sbjct: 483 IVAYQKAGLVAHAKRLLNELK----QPDNVSRETAITILARAGKVDEAMWVFRQAFDAGE 538

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
             ++  +  +ID++S+   Y   +++F + ++ G   D  + + +++A  K    E A +
Sbjct: 539 VKDISVFGCIIDIFSRERKYAHVVEVFEKMREVGHFPDSNVIALVLNAFGKLRKFERADA 598

Query: 531 LLDEMTKEG-IRPNVVTY 547
           L  +M +EG + P+ V +
Sbjct: 599 LYKQMYEEGCVFPDEVHF 616



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 197/407 (48%), Gaps = 18/407 (4%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKVDLA 212
           D YT+  L+     +G +  +     F +++ ER N  G L   S +I +  +L     A
Sbjct: 194 DKYTYSTLITHFSKQGLFDSSF----FWLQQMERDNVSGDLVLYSNLIELSRKLCDYSKA 249

Query: 213 KNIFETALNEGYGNTV---YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
            +IF     +G GN V    A + +IS YG++   +EA  +   M+   + P+  +Y+ +
Sbjct: 250 ISIFNAL--KGSGNIVPDLIACNMMISVYGKAKLFREARLLLQEMRDNGVNPSTASYSTL 307

Query: 270 IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
           + A       F   V +F +M       D  T N ++ V  +  + + A   F  M   G
Sbjct: 308 L-AIYVDNQKFVEAVSLFSEMNEVECPIDLTTCNIMIDVYGQLQMIKEADCFFWGMRKMG 366

Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
           I+ ++ +YNT+L    +      A  + + M  K +  NVVTY+TMI  Y K+   D A 
Sbjct: 367 IEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNTMISIYGKSLEHDKAT 426

Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
           N+  EM+  GI  + ++Y+T++SI+ K G+ + A ++  ++ +SG++ D + Y  ++  Y
Sbjct: 427 NLIQEMQSRGIQPNAITYSTIISIWEKAGKLDRAAMLFHKLRTSGVKIDEILYQTMIVAY 486

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            K G     +R+  ++K     P+ ++  T I + ++ G   EAM +FR+   AG   D+
Sbjct: 487 QKAGLVAHAKRLLNELK----QPDNVSRETAITILARAGKVDEAMWVFRQAFDAGEVKDI 542

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            ++  +ID   +       V + ++M + G  P+      +++AFG+
Sbjct: 543 SVFGCIIDIFSRERKYAHVVEVFEKMREVGHFPDSNVIALVLNAFGK 589



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 181/379 (47%), Gaps = 39/379 (10%)

Query: 299 RITFNSLLAVCSRGGLWE---AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +++   ++++ SR   W+   A  +  NE+       ++  YN ++  + +  Q  LA  
Sbjct: 124 QLSIRFMISILSREPDWQRSLAILDWMNEIAQYSPSLNV--YNVVIRNVLRAKQWQLAHG 181

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           +  EM  K +SP+  TYST+I  ++K G  D +     +M+   +  D V Y+ ++ +  
Sbjct: 182 LFDEMLQKGLSPDKYTYSTLITHFSKQGLFDSSFFWLQQMERDNVSGDLVLYSNLIELSR 241

Query: 416 KLGRFEEALLVCKEMESSG-IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNL 474
           KL  + +A+ +   ++ SG I  D +  N ++  YGK   + E R + ++M+ + V+P+ 
Sbjct: 242 KLCDYSKAISIFNALKGSGNIVPDLIACNMMISVYGKAKLFREARLLLQEMRDNGVNPST 301

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
            +YSTL+ +Y     + EA+ +F E  +     D+   + +ID   +  +++ A      
Sbjct: 302 ASYSTLLAIYVDNQKFVEAVSLFSEMNEVECPIDLTTCNIMIDVYGQLQMIKEADCFFWG 361

Query: 535 MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEA 594
           M K GI PNVV+YN+++  +G +              G   E+ +L ++     K V + 
Sbjct: 362 MRKMGIEPNVVSYNTVLRVYGEA--------------GLFGEAVHLFSLMQM--KGVPQN 405

Query: 595 GRTDNQIIKVFGQ-LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
             T N +I ++G+ L  +KA                  + Q+M    I+PN +T+S I++
Sbjct: 406 VVTYNTMISIYGKSLEHDKAT----------------NLIQEMQSRGIQPNAITYSTIIS 449

Query: 654 ACSRCNSFEDASMLLEELR 672
              +    + A+ML  +LR
Sbjct: 450 IWEKAGKLDRAAMLFHKLR 468



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 145/297 (48%), Gaps = 13/297 (4%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI + G+L  +  A   F      G    V +++ ++  YG +G   EA+ +F+ M+   
Sbjct: 342 MIDVYGQLQMIKEADCFFWGMRKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKG 401

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           +  N+VTYN +I   GK  ++      +  +M   G+QP+ IT+++++++  + G  + A
Sbjct: 402 VPQNVVTYNTMISIYGKS-LEHDKATNLIQEMQSRGIQPNAITYSTIISIWEKAGKLDRA 460

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             LF+++   G+  D   Y T++ A  K   +  A  ++ E+      P+ V+  T I  
Sbjct: 461 AMLFHKLRTSGVKIDEILYQTMIVAYQKAGLVAHAKRLLNELK----QPDNVSRETAITI 516

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
            A+AG++D+A+ +F +    G   D   +  ++ I+++  ++   + V ++M   G   D
Sbjct: 517 LARAGKVDEAMWVFRQAFDAGEVKDISVFGCIIDIFSRERKYAHVVEVFEKMREVGHFPD 576

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKAD-CVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +     +L  +GK  K++    +++QM  + CV P+ + +  L       GLY   M
Sbjct: 577 SNVIALVLNAFGKLRKFERADALYKQMYEEGCVFPDEVHFQML-------GLYGARM 626


>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
          Length = 521

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 188/379 (49%), Gaps = 21/379 (5%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGN-TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
           L R G++  A  + E AL    G+ + +A S ++    +SG   +A  + + M R+ +  
Sbjct: 105 LRRAGRLADAAGLLERALGSCPGSVSPFAASVVVDGLCKSGRVDDARRLLDDMPRHGVSL 164

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           N + YN+++D C     D   V EI + M   G++    T+  L+   S          L
Sbjct: 165 NALCYNSLLD-CYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEAL 223

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           FNEM    +  D++ Y  +++A C+   M  A +++ E     + PN  TY  +I G+ K
Sbjct: 224 FNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCK 283

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G+++ A  + ++M+  G+GL+++ +NT++  Y + G  ++AL +   ME  G+  +  T
Sbjct: 284 IGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYT 343

Query: 442 YNALLGG-------------------YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           YN L  G                   + K G   E RR+F +M     +P++LTYS +I 
Sbjct: 344 YNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIH 403

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            Y+K G  +EA +  +E ++ G   DV  Y++L+   C NG V+ A+ L +EM + G  P
Sbjct: 404 GYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEP 463

Query: 543 NVVTYNSIIDAFGRSATTE 561
           NVV Y ++I    +   +E
Sbjct: 464 NVVAYTALISGLAKEGRSE 482



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 193/381 (50%), Gaps = 26/381 (6%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS---GYCQEAISVFN 252
           AS ++  L + G+VD A+ + +     G       +++L+  Y R    G  QE + +  
Sbjct: 134 ASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI-- 191

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            M+   ++  + TY  ++D+      D   V  +F++M  N V  D   + +++    R 
Sbjct: 192 -MENEGIEATVGTYTILVDSLSTAR-DISKVEALFNEMKANNVVGDVYLYTAVINAYCRA 249

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G    A  + +E V  G++ +  TY  L+   CK  QM+ A  ++A+M  + +  N + +
Sbjct: 250 GNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIF 309

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGI------------GLDR-------VSYNTVLSI 413
           +TMIDGY + G +DDAL + + M+ +G+            GL R       V+Y T++SI
Sbjct: 310 NTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISI 369

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           + K G   EA  + +EM   G     +TY+ ++ GY K+G+  E  R  ++M+     P+
Sbjct: 370 HCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPD 429

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           + TY++L+  +   G    A+++F E KQ G + +VV Y+ALI  L K G  E+A  L D
Sbjct: 430 VYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYD 489

Query: 534 EMTKEGIRPNVVTYNSIIDAF 554
           +M K G+ P+   Y++++ + 
Sbjct: 490 DMLKAGLIPDDSLYSALVGSL 510



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 137/282 (48%), Gaps = 24/282 (8%)

Query: 167 GNRGEWSKAI-QCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYG 225
           GN    +K + +C    V+  ER          +I    ++G+++ A+ +      +G G
Sbjct: 250 GNMRRAAKVLDECVGNGVEPNERTY------GVLIKGFCKIGQMEAAEMLLADMQGQGVG 303

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
                F+ +I  Y R G   +A+ +  +M++  ++ N+ TYN +  ACG           
Sbjct: 304 LNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTL--ACG----------- 350

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
               + R GV P+ +T+ +L+++  + G    AR LF EM  +G    + TY+ ++    
Sbjct: 351 ----LCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYA 406

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  ++  A     EM  K   P+V TY++++ G+   G++D AL +F EMK  G   + V
Sbjct: 407 KKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVV 466

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           +Y  ++S  AK GR E A  +  +M  +G+  D   Y+AL+G
Sbjct: 467 AYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVG 508


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 196/394 (49%), Gaps = 5/394 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  LG +G+  +      FA+      N  G   + +I  L +   VD A+ +   
Sbjct: 347 YTALMDWLGKQGKTDEVKDTLRFALSDNLSPN--GVTYTVLIDALCKAHNVDEAEQVLLE 404

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK-GG 277
              +     V  FS++I+ + + G   +A      MK   + PN+VTY  +ID   K  G
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            D    +E++ DML  GV+ ++   +SL+    + G  E A  LF +    G+  D   Y
Sbjct: 465 QD--AALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TL+D + K   M  AF+   E+  +N+ P+ V Y+  I+     G+  +A +  +EM+ 
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           +G+  D+ +YNT++  + + G   +AL +  EM+ S I+ + +TYN L+ G    G  ++
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            + +  +M +   SP+ LT+  ++   S+       + I      AGL AD+ +Y+ L+ 
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            LC +G+   A  +L+EM   GI P+ +T+N++I
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 229/497 (46%), Gaps = 35/497 (7%)

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +++ +N +I    + G D    + + D M   G+  D + +N+L+A   R G  +AAR +
Sbjct: 168 DVIGWNTLIAGYCRVG-DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGV 226

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            + M   G+D ++ TY   +   C+   ++ AF++   M    +  +VVT S ++ G  +
Sbjct: 227 LDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCR 286

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            GR  +A  +F EM  +G   + V+Y T++   AK GR +E L +  EM S G+  D VT
Sbjct: 287 DGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVT 346

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y AL+   GKQGK DEV+       +D +SPN +TY+ LID   K     EA Q+  E +
Sbjct: 347 YTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEME 406

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF----GRS 557
           +  +  +VV +S++I+   K GL++ A      M + GI PNVVTY ++ID F    G+ 
Sbjct: 407 EKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQD 466

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
           A  E   D +    G +     +D++ +         G   N  I+    L  + +G G 
Sbjct: 467 AALEVYHDMLCE--GVKVNKFIVDSLVN---------GLRQNGKIEEAMALFKDASGSGL 515

Query: 618 KENRCRQEILCILGVF------------QKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
             +      L I G+F            Q++    + P+ V ++  +N       F++A 
Sbjct: 516 SLDHVNYTTL-IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 666 MLLEELRLF----DNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
             L E+R      D   Y     ++   R     +AL L  E+K+         YN L  
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTM--IVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 722 MLWHFGQKRGAQLVVLE 738
            L+  G    A+ ++ E
Sbjct: 633 GLFGTGAVEKAKYLLNE 649



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 182/356 (51%), Gaps = 1/356 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R   V+ A +++E  +  G    V   SAL++   R G   EA ++F  M +    PN V
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TY  +ID+  K G   K ++ +  +M+  GV  D +T+ +L+    + G  +  ++    
Sbjct: 311 TYCTLIDSLAKAGRG-KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF 369

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
            +   +  +  TY  L+DA+CK   +D A +++ EM  K+ISPNVVT+S++I+G+ K G 
Sbjct: 370 ALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL 429

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD A      MK  GI  + V+Y T++  + K    + AL V  +M   G++ +    ++
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G  + GK +E   +F+      +S + + Y+TLID   K G    A +  +E     
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           +  D V+Y+  I+ LC  G  + A S L EM   G++P+  TYN++I +  R   T
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGET 605



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 195/405 (48%), Gaps = 7/405 (1%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKN-DQGKLASAMISILGRLGKVDLAKNIF 216
           +YT L+  L   G+   A   F F  +  +R       + +  I+ L  LGK   AK+  
Sbjct: 521 NYTTLIDGLFKAGDMPTA---FKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFL 577

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC-GK 275
               N G       ++ +I ++ R G   +A+ + + MK  ++KPNL+TYN ++    G 
Sbjct: 578 TEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGT 637

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G V+      + ++M+  G  P  +T   +L  CS+    +   ++   M++ G+  DI 
Sbjct: 638 GAVE--KAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADIT 695

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            YNTLL  +C       A  ++ EM    I+P+ +T++ +I G+ K+  LD+A   +++M
Sbjct: 696 VYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQM 755

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
               I  +  ++NT+L     +GR  EA  V  EME SG+  + +TY+ L  G+GKQ   
Sbjct: 756 LHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNK 815

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            E  R++ +M      P + TY+ LI  ++K G+  +A ++F++ ++ G+      Y  L
Sbjct: 816 VEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDIL 875

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           +    +          L +M ++G  P+  T + I  AF +   T
Sbjct: 876 VSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 234/498 (46%), Gaps = 43/498 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+   R+G    A ++ +    +G    V  ++ L++ + R+G    A  V + MK 
Sbjct: 173 NTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKE 232

Query: 257 YNLKPNLVTYNA-VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + PN+ TY   ++  C   GV+     ++++ M+RNGV  D +T ++L+A   R G +
Sbjct: 233 AGVDPNVATYTPFIVYYCRTKGVE--EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  LF EM   G   +  TY TL+D++ K  +      ++ EM ++ +  ++VTY+ +
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +D   K G+ D+  +         +  + V+Y  ++    K    +EA  V  EME   I
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + VT+++++ G+ K+G  D+       MK   ++PN++TY TLID + K      A++
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALE 470

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-- 553
           ++ +    G+K +  +  +L++ L +NG +E A++L  + +  G+  + V Y ++ID   
Sbjct: 471 VYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLF 530

Query: 554 ----------FG-----RSATTECTVDDVERD----LGKQKESANLDAMCSQDDKDVQEA 594
                     FG     R+   +  V +V  +    LGK KE+ +   +    +  ++  
Sbjct: 531 KAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF--LTEMRNMGLKPD 588

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILN 653
             T N +I                 + CR+ E    L +  +M    IKPN++T++ ++ 
Sbjct: 589 QSTYNTMIV----------------SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 654 ACSRCNSFEDASMLLEEL 671
                 + E A  LL E+
Sbjct: 633 GLFGTGAVEKAKYLLNEM 650



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 135/565 (23%), Positives = 248/565 (43%), Gaps = 33/565 (5%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L + G+     ++    ++ G    +  ++AL+   G+ G   E           N
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           L PN VTY  +IDA C    VD     ++  +M    + P+ +TF+S++    + GL + 
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVD--EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDK 432

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A      M  RGI+ ++ TY TL+D   K    D A E+  +M  + +  N     ++++
Sbjct: 433 ATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVN 492

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G  + G++++A+ +F +    G+ LD V+Y T++    K G    A    +E+    +  
Sbjct: 493 GLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLP 552

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           DAV YN  +      GK+ E +    +M+   + P+  TY+T+I  + + G   +A+++ 
Sbjct: 553 DAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLL 612

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E K + +K +++ Y+ L+  L   G VE A  LL+EM   G  P+ +T+  ++ A  +S
Sbjct: 613 HEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQS 672

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEA---GRTDNQIIKVFGQLVAEKAG 614
                   DV  D+ +   +A L A  +  +  +Q     G T    +     ++ E  G
Sbjct: 673 RRL-----DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATV-----VLEEMLG 722

Query: 615 QGKKENRCRQEILCILG------------VFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
            G   +      L ILG             + +M    I PN+ TF+ +L          
Sbjct: 723 SGIAPDTITFNAL-ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIG 781

Query: 663 DASMLLEELRLFDNQVYGVAHGLLM---GYRDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
           +A  +L E+     +   + + +L    G + N  V+A+ L+ E+         + YNAL
Sbjct: 782 EAGTVLIEMEKSGLEPNNLTYDILATGHGKQSN-KVEAMRLYCEMVGKGFVPKVSTYNAL 840

Query: 720 TDMLWHFGQKRGAQLVVLEGKRRQV 744
                  G    A+ +  + ++R V
Sbjct: 841 ISDFTKAGMMTQAKELFKDMQKRGV 865



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 176/365 (48%), Gaps = 3/365 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           +  ++++ L + GK++ A  +F+ A   G       ++ LI    ++G    A      +
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
              N+ P+ V YN  I+  C  G   FK       +M   G++PD+ T+N+++    R G
Sbjct: 546 MDRNMLPDAVVYNVFINCLCMLG--KFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKG 603

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
               A  L +EM    I  ++ TYNTL+  +     ++ A  ++ EM +   SP+ +T+ 
Sbjct: 604 ETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            ++   +++ RLD  L++   M   G+  D   YNT+L +    G   +A +V +EM  S
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI  D +T+NAL+ G+ K    D     + QM    +SPN+ T++TL+      G   EA
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             +  E +++GL+ + + Y  L     K      A+ L  EM  +G  P V TYN++I  
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 554 FGRSA 558
           F ++ 
Sbjct: 844 FTKAG 848



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 166/366 (45%), Gaps = 49/366 (13%)

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +P  + +N LLA  S       A  +  EM  RG+  D  T NTLL  +C+  Q+D A  
Sbjct: 100 RPTTVAYNILLAALSD---HAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAA-A 155

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
            +A+      + +V+ ++T+I GY + G    AL++   M   G+ +D V YNT+++ + 
Sbjct: 156 ALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           + G+ + A  V   M+ +G+  +  TY   +  Y +    +E   ++E M  + V  +++
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           T S L+    + G + EA  +FRE  + G   + V Y  LID+L K G  +  +SLL EM
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDD 588
              G+  ++VTY +++D  G+   T+  V D  R       S N       +DA+C   +
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTD-EVKDTLRFALSDNLSPNGVTYTVLIDALCKAHN 394

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
            D  E                                      V  +M +  I PNVVTF
Sbjct: 395 VDEAEQ-------------------------------------VLLEMEEKSISPNVVTF 417

Query: 649 SAILNA 654
           S+++N 
Sbjct: 418 SSVING 423


>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
 gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
          Length = 431

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 178/330 (53%), Gaps = 1/330 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V   +A+I+AYGRS    + +  F  + ++  KPN  TY  VI +  K G +    ++  
Sbjct: 14  VLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAG-NVVLAMDFL 72

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           D M++ G++PD + +N +L    +  + + A  LF  M   G   D +TY  L+ ++ + 
Sbjct: 73  DKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRC 132

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            + + A  +  EM  +  +P+   Y+ +ID Y KAGR++ A+ +  +M    +  D  + 
Sbjct: 133 KRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTL 192

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N++++  ++ GR E A  + + M+ SG+  + V++NA+L   GK GK     +  ++M+A
Sbjct: 193 NSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEA 252

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + PN +T++TLI+   +     EA ++ +E + AGL  DV  Y+ +I+A  K G +  
Sbjct: 253 RGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGK 312

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           A  +  +M K G   NVVTYN +IDA  ++
Sbjct: 313 AFEMFGDMEKAGCSANVVTYNLLIDALVKA 342



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 196/375 (52%), Gaps = 1/375 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           +++A+I+  GR  ++    + F+     G     Y +  +I +  ++G    A+   + M
Sbjct: 16  VSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKM 75

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
            +  L+P+ + YN V+D  GK  +      ++F  M   G   D  T+  L+    R   
Sbjct: 76  IKTGLEPDTLLYNVVLDGLGKANM-IDEACKLFASMKSMGCPADDYTYAILIRSLGRCKR 134

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E A  LF+EM  RG       Y  ++D  CK  +++ A  ++ +M  KN++P+  T ++
Sbjct: 135 DEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNS 194

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I   ++ GR + A  +F  MK  G+ ++ VS+N +L    K G+   A     EME+ G
Sbjct: 195 LITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARG 254

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I+ +++T+N L+   G+     E  ++ ++M++  ++P++ TY+ +I+ ++K G   +A 
Sbjct: 255 IKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAF 314

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++F + ++AG  A+VV Y+ LIDAL K G  + A  +  +M K+GI P+ +T   +    
Sbjct: 315 EMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLA 374

Query: 555 GRSATTECTVDDVER 569
           G+   +  ++D+ E+
Sbjct: 375 GKCKLSGISLDENEQ 389



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 15/203 (7%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS----- 197
           +LKK   K    DDYT   L+  +   G    A + F       ER    G   +     
Sbjct: 176 VLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIF-------ERMKKSGVAVNTVSFN 228

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           AM+   G+ GKV LA    +     G       F+ LI+  GR+ Y  EA  V   M+  
Sbjct: 229 AMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSA 288

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
            L P++ TY  +I+A  K G +     E+F DM + G   + +T+N L+    + G ++ 
Sbjct: 289 GLTPDVFTYTCMIEAFAKAG-NMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQD 347

Query: 318 ARNLFNEMVHRGIDQDIFTYNTL 340
           AR+++ +M  +GI  D  T   L
Sbjct: 348 ARDIYFDMKKKGILPDAITATVL 370



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 77/380 (20%), Positives = 155/380 (40%), Gaps = 69/380 (18%)

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           ++ +  R   +  NA++  YG+  +  +V   F+++      PN  TY  +I    K G 
Sbjct: 5   IQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGN 64

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV------------------------ 525
              AM    +  + GL+ D +LY+ ++D L K  ++                        
Sbjct: 65  VVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAI 124

Query: 526 -----------ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
                      E A  L DEM + G  P+   Y ++ID + ++   E  +  +++ L K 
Sbjct: 125 LIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKN 184

Query: 575 --KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI--- 629
              +   L+++ +     V   GRT+    ++F ++  +K+G           + C    
Sbjct: 185 LAPDDYTLNSLITA----VSRTGRTE-LACEIFERM--KKSGVAVNTVSFNAMLDCCGKA 237

Query: 630 --LGV-FQKMHKLK---IKPNVVTFSAILNACSRCNSFEDASMLLEELR---------LF 674
             +G+ +Q M +++   IKPN +TF+ ++N   R     +A  +L+E+R          +
Sbjct: 238 GKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTY 297

Query: 675 DNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
              +   A    MG       +A  +F +++    S     YN L D L   G+ + A+ 
Sbjct: 298 TCMIEAFAKAGNMG-------KAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARD 350

Query: 735 VVLEGKRRQVWENVWSESCL 754
           +  + K++ +  +  + + L
Sbjct: 351 IYFDMKKKGILPDAITATVL 370


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 235/516 (45%), Gaps = 51/516 (9%)

Query: 53  PPLSPSPRNAPKPAATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGR 112
           PP SP  +       TS     NP P                 ++ R S           
Sbjct: 23  PPFSPQLKPTSHSHHTSIVTCRNPNPNDG--------------YNSRNS----------- 57

Query: 113 PKIAMSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEW 172
           PK+ +S      AE    H+ ++   +  L  +L +   K    ++  + L  L N+G  
Sbjct: 58  PKVGVS------AEARPAHLQSYDFRETHLMKLLNR-SCKAGKFNESLYFLECLVNKGYT 110

Query: 173 SKAIQCFA-----FAVKREERKNDQGKLA-----------SAMISILGRLGKVDLAKNIF 216
              I C       F  K  E+ +   ++            +A+IS   ++ +++ A  + 
Sbjct: 111 PDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVL 170

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC-GK 275
                 G+   +  ++ +I +         A++V + +   N  P ++TY  +I+A   +
Sbjct: 171 NRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVE 230

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           GG++    +++ ++ML  G+ PD  T+N+++    + G+ E A  L   +  +G + D+ 
Sbjct: 231 GGIN--EAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVI 288

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           +YN LL A     + D   +++AEM ++   PN VTYS +I    + GR+D+A+++   M
Sbjct: 289 SYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVM 348

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
               +  D  SY+ ++S   K GR + A+ +   M S+G   D V YN +L    K G  
Sbjct: 349 IEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNA 408

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           ++   +F +++     PN+ +Y+T+I      G    A+ +       G+  D + Y++L
Sbjct: 409 NQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSL 468

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           I  LC++GLVE A+ LLD+M + G RP V++YN ++
Sbjct: 469 ISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 504



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 185/387 (47%), Gaps = 5/387 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI  L    K+ LA  + +  L +    TV  ++ LI A    G   EA+ +   M    
Sbjct: 188 MIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG 247

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           L P++ TYNA+I    K G+  +   E+   +   G +PD I++N LL      G W+  
Sbjct: 248 LLPDMYTYNAIIRGMCKEGM-VERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEG 306

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L  EM  RG + +  TY+ L+ ++C+  ++D A  ++  M  K ++P+  +Y  +I  
Sbjct: 307 EKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 366

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K GRLD A+ +   M   G   D V+YNT+L+   K G   +AL +  ++   G   +
Sbjct: 367 LCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 426

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
             +YN ++      G       M   M +  + P+ +TY++LI    + GL +EA+ +  
Sbjct: 427 VSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLD 486

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG--- 555
           + +Q+G +  V+ Y+ ++  LCK   ++ A+ +  EM ++G RPN  TY  +I+  G   
Sbjct: 487 DMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG 546

Query: 556 -RSATTECTVDDVERDLGKQKESANLD 581
            R+   E       RD+  Q     L+
Sbjct: 547 WRTEAMELANSLFSRDVISQDSFKRLN 573



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 185/347 (53%), Gaps = 8/347 (2%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V+A++A+IS + +    + A  V N MK     P++VTYN +I + C +  +     + +
Sbjct: 147 VFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGL--ALTV 204

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
            D +L +   P  IT+  L+ A    GG+ EA + L  EM+ RG+  D++TYN ++  +C
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMK-LLEEMLARGLLPDMYTYNAIIRGMC 263

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K   ++ A E++  + +K   P+V++Y+ ++  +   G+ D+   + +EM   G   ++V
Sbjct: 264 KEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 323

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y+ ++S   + GR +EA+ V K M    +  D  +Y+ L+    K+G+ D    + + M
Sbjct: 324 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 383

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
            ++   P+++ Y+T++    K G   +A++IF + +  G   +V  Y+ +I AL   G  
Sbjct: 384 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 443

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV---DDVER 569
             A+ ++  M  +GI P+ +TYNS+I    R    E  +   DD+E+
Sbjct: 444 SRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ 490



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 209/453 (46%), Gaps = 28/453 (6%)

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI--FDDML 291
           L++   ++G   E++     +      P+++    +I    KG  +FK++ +     ++L
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLI----KGFFNFKNIEKASRVMEIL 139

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
            +  +PD   +N++++   +    EAA  + N M  RG   DI TYN ++ ++C   ++ 
Sbjct: 140 ESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLG 199

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
           LA  ++ ++   N  P V+TY+ +I+     G +++A+ +  EM   G+  D  +YN ++
Sbjct: 200 LALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 259

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
               K G  E A  +   + S G   D ++YN LL  +  QGK+DE  ++  +M +    
Sbjct: 260 RGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 319

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           PN +TYS LI    + G   EA+ + +   +  L  D   Y  LI ALCK G ++ A+ +
Sbjct: 320 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 379

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGR--SATTECTVDDVERDLGKQKESANLDAMCSQ--- 586
           +D M   G  P++V YN+I+ A  +  +A     + +  R +G     ++ + M S    
Sbjct: 380 MDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 439

Query: 587 -DDKDVQEAGRTDNQIIK-------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
             D+  +  G     I K        +  L++     G  E          +G+   M +
Sbjct: 440 CGDRS-RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEA--------IGLLDDMEQ 490

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              +P V++++ +L    +    +DA  +  E+
Sbjct: 491 SGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEM 523



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 145/305 (47%), Gaps = 9/305 (2%)

Query: 143 GDILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMI 200
            +++     K C  D   Y  LLR   N+G+W +  +  A    R    N      S +I
Sbjct: 272 AELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT--YSILI 329

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           S L R G++D A ++ +  + +      Y++  LISA  + G    AI + + M      
Sbjct: 330 SSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCL 389

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           P++V YN ++ A  K G +    +EIF+ +   G  P+  ++N++++     G    A  
Sbjct: 390 PDIVNYNTILAALCKNG-NANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 448

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           +   M+ +GID D  TYN+L+  +C+   ++ A  ++ +M      P V++Y+ ++ G  
Sbjct: 449 MVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 508

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K  R+DDA+ MF+EM   G   +  +Y  ++      G   EA+    E+ +S   +D +
Sbjct: 509 KVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAM----ELANSLFSRDVI 564

Query: 441 TYNAL 445
           + ++ 
Sbjct: 565 SQDSF 569



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 178/421 (42%), Gaps = 86/421 (20%)

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY------AKAGRLDDALNMFS 393
           LL+  CK  + + +   +  +  K  +P+V+  + +I G+       KA R+ + L   +
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 143

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           E        D  +YN V+S + K+ + E A  V   M++ G   D VTYN ++G    + 
Sbjct: 144 EP-------DVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 196

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           K      + +Q+  D   P ++TY+ LI+     G   EAM++  E    GL  D+  Y+
Sbjct: 197 KLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 256

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           A+I  +CK G+VE A  L+  +T +G  P+V++YN ++ AF               + GK
Sbjct: 257 AIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAF--------------LNQGK 302

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL----CI 629
             E                              +LVAE   +G + N+    IL    C 
Sbjct: 303 WDEGE----------------------------KLVAEMFSRGCEPNKVTYSILISSLCR 334

Query: 630 LG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA 682
            G       V + M + ++ P+  ++  +++A  +    + A  +++         Y ++
Sbjct: 335 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMD---------YMIS 385

Query: 683 HGLL---MGYRDNIWV--------QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRG 731
           +G L   + Y   +          QAL +F++++ M      + YN +   LW  G +  
Sbjct: 386 NGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSR 445

Query: 732 A 732
           A
Sbjct: 446 A 446


>gi|7529747|emb|CAB86932.1| putative protein [Arabidopsis thaliana]
 gi|24030379|gb|AAN41351.1| unknown protein [Arabidopsis thaliana]
          Length = 526

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 207/397 (52%), Gaps = 15/397 (3%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+  G+LG  + A+ +       G    V +++AL+ +YGR G C  A ++F  M+   
Sbjct: 88  LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 147

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML---RNGVQPDRITFNSLLAVCSRGGLW 315
            +P+ +TY  ++    +G   FK   E+F+ +L   ++ ++PD+  ++ ++ +  + G +
Sbjct: 148 PEPSAITYQIILKTFVEGD-KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 206

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E AR +F+ MV +G+ Q   TYN+L+       ++    +I  +M   +I P+VV+Y+ +
Sbjct: 207 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALL 263

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I  Y +A R ++AL++F EM   G+     +YN +L  +A  G  E+A  V K M    I
Sbjct: 264 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 323

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  +Y  +L  Y      +   + F+++K D   PN++TY TLI  Y+K    ++ M+
Sbjct: 324 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 383

Query: 496 IFREFKQAGLKADVVLYSALIDA--LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           ++ + + +G+KA+  + + ++DA   CKN    SA+    EM   G+ P+    N ++  
Sbjct: 384 VYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGVPPDQKAKNVLLSL 441

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
               A+T+  +++ +   G + E+A + A     D D
Sbjct: 442 ----ASTQDELEEAKELTGIRNETATIIARVYGSDDD 474



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 145/346 (41%), Gaps = 63/346 (18%)

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           + +  +I  Y K G  + A  + S +  +G   + +SY  ++  Y + G+   A  + + 
Sbjct: 83  IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 142

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM---KADCVSPNLLTYSTLIDVYSK 486
           M+SSG    A+TY  +L  + +  K+ E   +FE +   K   + P+   Y  +I +Y K
Sbjct: 143 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 202

Query: 487 GG--------------------------------LYKEAMQIFREFKQAGLKADVVLYSA 514
            G                                 YKE  +I+ + +++ ++ DVV Y+ 
Sbjct: 203 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYAL 262

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC--TV------DD 566
           LI A  +    E A+S+ +EM   G+RP    YN ++DAF  S   E   TV      D 
Sbjct: 263 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 322

Query: 567 VERDLGKQKESANLDAMCSQDD--------KDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
           +  DL     +  L A  +  D        K ++  G   N  I  +G L+   A    K
Sbjct: 323 IFPDLWSY--TTMLSAYVNASDMEGAEKFFKRIKVDGFEPN--IVTYGTLIKGYA----K 374

Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
            N   +    ++ V++KM    IK N    + I++A  RC +F  A
Sbjct: 375 ANDVEK----MMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSA 416



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 148/328 (45%), Gaps = 30/328 (9%)

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           FSE+ FL           +++ Y KLG F  A  V   +   G   + ++Y AL+  YG+
Sbjct: 80  FSEIDFL----------MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGR 129

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF---KQAGLKAD 508
            GK +    +F +M++    P+ +TY  ++  + +G  +KEA ++F      K++ LK D
Sbjct: 130 GGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPD 189

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
             +Y  +I    K G  E A  +   M  +G+  + VTYNS++       + E +  +V 
Sbjct: 190 QKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM-------SFETSYKEVS 242

Query: 569 RDLGK-QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
           +   + Q+     D +            R + + + VF +++        K      +  
Sbjct: 243 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 302

Query: 628 CILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG 680
            I G       VF+ M + +I P++ +++ +L+A    +  E A    + +++   +   
Sbjct: 303 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 362

Query: 681 VAHG-LLMGY-RDNIWVQALSLFDEVKL 706
           V +G L+ GY + N   + + ++++++L
Sbjct: 363 VTYGTLIKGYAKANDVEKMMEVYEKMRL 390



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 122/277 (44%), Gaps = 33/277 (11%)

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           LI  Y K G +  A ++     + G   +V+ Y+AL+++  + G   +A ++   M   G
Sbjct: 88  LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 147

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
             P+ +TY  I+  F            VE D  K+ E    + +  +    ++   +  +
Sbjct: 148 PEPSAITYQIILKTF------------VEGDKFKEAEEV-FETLLDEKKSPLKPDQKMYH 194

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
            +I ++     +KAG  +K  +          VF  M    +  + VT+++++   S   
Sbjct: 195 MMIYMY-----KKAGNYEKARK----------VFSSMVGKGVPQSTVTYNSLM---SFET 236

Query: 660 SFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYN 717
           S+++ S + ++++  D Q   V++ LL+  Y R     +ALS+F+E+           YN
Sbjct: 237 SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 296

Query: 718 ALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
            L D     G    A+ V    +R +++ ++WS + +
Sbjct: 297 ILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 333


>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
 gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
          Length = 546

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 216/448 (48%), Gaps = 42/448 (9%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           + FS LIS YGR+   ++A+     M+   +KP+LV ++ +I+  GK   D+     +F 
Sbjct: 61  FTFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVK-DYSKATSLFS 119

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            +  +G+ PD++ +NS++ +  +   ++ A+ L  EM   G+  D  +Y  L++A  +  
Sbjct: 120 KLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQ 179

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM-KFLGIGLDRVSY 407
           +   A ++  EM  K I  +V T + MID Y K   + DA  +F  M K LGI  + V+Y
Sbjct: 180 KYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTY 239

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSG-IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           NT++ +Y +     EA  V   M++ G +  + +TYN +L  +G   ++++  R+  +M+
Sbjct: 240 NTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQ 299

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + PN +TYSTLI +Y K G Y  A  +F+  ++ G + D +LY ++I    + GLV 
Sbjct: 300 QRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVA 359

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKESANLDAMC 584
            A  LL+E+ +    P++V  ++ I    ++   E       R  + G+ KES    +M 
Sbjct: 360 HAKRLLEELKQ----PDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSM- 414

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
                            I++F            +  R +  I     VF+ M +    P+
Sbjct: 415 -----------------IQLF-----------VRNKRSKNAI----DVFENMRESGFLPD 442

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELR 672
             T   +L A  +    EDA  L  ++R
Sbjct: 443 SETTVVLLAAYGQLRQLEDAEKLYLDMR 470



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 185/374 (49%), Gaps = 7/374 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +IS  GR  +++ A    +     G    +  FS LI   G+     +A S+F+ +K 
Sbjct: 64  STLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKA 123

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P+ V YN++I+  GK    +K    +  +M   G+ PD +++  L+   +    + 
Sbjct: 124 SGIAPDKVIYNSMINLYGKAKF-YKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYL 182

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYSTM 375
            A+ +F EM  +GI  D+ T N ++D   K   +  A E+   M     I  NVVTY+TM
Sbjct: 183 EAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTM 242

Query: 376 IDGYAKAGRLDDALNMFSEMKFL-GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           I  Y +A  L +A N+F  M+   G+  + ++YNT+L ++    + E+A+ + ++M+  G
Sbjct: 243 IKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRG 302

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I  +AVTY+ L+  YGK GKYD    +F+ ++      + + Y ++I VY + GL   A 
Sbjct: 303 IEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAK 362

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++  E KQ     D+V     I  L K   +E A  L     + G     VTY S+I  F
Sbjct: 363 RLLEELKQ----PDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLF 418

Query: 555 GRSATTECTVDDVE 568
            R+  ++  +D  E
Sbjct: 419 VRNKRSKNAIDVFE 432



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 185/361 (51%), Gaps = 34/361 (9%)

Query: 315 WEAARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           W+ +  L + M+ +G     IF YN +L  + +  Q +LA  ++ EM  K++ P+  T+S
Sbjct: 5   WQRSLALHDWMIEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFS 64

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T+I GY +A RL+DA+    EM+  GI  D V ++T++ +  K+  + +A  +  ++++S
Sbjct: 65  TLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKAS 124

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI  D V YN+++  YGK   Y E + +  +MK   + P+ ++Y+ LI+ Y++   Y EA
Sbjct: 125 GIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEA 184

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE-GIRPNVVTYNSIID 552
            Q+F E K  G++ DV   + +ID   K  +V  A  L   M+K  GI+ NVVTYN++I 
Sbjct: 185 KQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIK 244

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG-QLVAE 611
            +  +                  E+ N+     Q+   V+    T N I+ + G  L  E
Sbjct: 245 VYKEAELL--------------SEAFNV-FYYMQNKGGVEPNVITYNTILFLHGLTLQHE 289

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           KA                + + +KM +  I+PN VT+S +++   +   ++ A+ L + L
Sbjct: 290 KA----------------MRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTL 333

Query: 672 R 672
           R
Sbjct: 334 R 334



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 154/276 (55%), Gaps = 3/276 (1%)

Query: 279 DFKHVVEIFDDML-RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           D++  + + D M+ + G  P    +N +L    R   WE A  L  EMV + +  D FT+
Sbjct: 4   DWQRSLALHDWMIEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTF 63

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           +TL+    +  +++ A   + EM A  I P++V +ST+I+   K      A ++FS++K 
Sbjct: 64  STLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKA 123

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI  D+V YN+++++Y K   ++EA  +  EM+ +G+  D V+Y  L+  Y +  KY E
Sbjct: 124 SGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLE 183

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF-KQAGLKADVVLYSALI 516
            +++F +MK   +  ++ T + +IDVY K  + ++A ++F    K  G++ +VV Y+ +I
Sbjct: 184 AKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMI 243

Query: 517 DALCKNGLVESAVSLLDEM-TKEGIRPNVVTYNSII 551
               +  L+  A ++   M  K G+ PNV+TYN+I+
Sbjct: 244 KVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTIL 279



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 182/362 (50%), Gaps = 7/362 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I + G++     A ++F      G       ++++I+ YG++ + +EA  +   MK 
Sbjct: 99  STLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKE 158

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L P+ V+Y  +I+A  +    +    ++F +M   G+Q D  T N ++ V  +  +  
Sbjct: 159 AGLMPDTVSYTILINAYAESQ-KYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVR 217

Query: 317 AARNLFNEMVHR-GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVTYST 374
            A  LF  M    GI Q++ TYNT++    +   +  AF +   M  K  + PNV+TY+T
Sbjct: 218 DAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNT 277

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++  +    + + A+ +  +M+  GI  + V+Y+T++SIY K G+++ A  + K +   G
Sbjct: 278 ILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKG 337

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D + Y +++  Y + G     +R+ E++K     P+++   T I + +K    +EA 
Sbjct: 338 FEMDEILYQSMIVVYERAGLVAHAKRLLEELK----QPDIVPRDTAISILAKAEKLEEAA 393

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +++    +AG   + V Y ++I    +N   ++A+ + + M + G  P+  T   ++ A+
Sbjct: 394 KLYWRSHEAGEIKESVTYKSMIQLFVRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAY 453

Query: 555 GR 556
           G+
Sbjct: 454 GQ 455



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 157/341 (46%), Gaps = 34/341 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI++ G+      A+ +       G      +++ LI+AY  S    EA  VF  MK 
Sbjct: 134 NSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKT 193

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLW 315
             ++ ++ T N +ID  GK  +  +   E+F  M +  G+Q + +T+N+++ V     L 
Sbjct: 194 KGIQLDVTTCNMMIDVYGKLEM-VRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELL 252

Query: 316 EAARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
             A N+F  M ++G ++ ++ TYNT+L       Q + A  ++ +M  + I PN VTYST
Sbjct: 253 SEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYST 312

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY--------------------------- 407
           +I  Y K G+ D A  +F  ++  G  +D + Y                           
Sbjct: 313 LISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPD 372

Query: 408 ----NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
               +T +SI AK  + EEA  +      +G  K++VTY +++  + +  +      +FE
Sbjct: 373 IVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNKRSKNAIDVFE 432

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
            M+     P+  T   L+  Y +    ++A +++ + ++ G
Sbjct: 433 NMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERG 473



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 161/341 (47%), Gaps = 12/341 (3%)

Query: 199 MISILGRLGKVDLAKNIF-ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK-R 256
           MI + G+L  V  A+ +F   +   G    V  ++ +I  Y  +    EA +VF  M+ +
Sbjct: 206 MIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNK 265

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKH--VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
             ++PN++TYN ++   G   +  +H   + +   M + G++P+ +T+++L+++  + G 
Sbjct: 266 GGVEPNVITYNTILFLHG---LTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGK 322

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           ++ A  LF  +  +G + D   Y +++    +   +  A  ++ E+      P++V   T
Sbjct: 323 YDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELK----QPDIVPRDT 378

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
            I   AKA +L++A  ++      G   + V+Y +++ ++ +  R + A+ V + M  SG
Sbjct: 379 AISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNKRSKNAIDVFENMRESG 438

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              D+ T   LL  YG+  + ++  +++  M+    +     +  ++ +Y      +EA 
Sbjct: 439 FLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGDARKIREAE 498

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
            +F   K  GL  D  LY  +I    +   +  A  L  EM
Sbjct: 499 DMFAALKLEGLDGD-ELYLTMIRIYERASKLNEASRLFSEM 538



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 33/231 (14%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +ISI G+ GK D A  +F+T   +G+      + ++I  Y R+G    A  +   +K+
Sbjct: 311 STLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQ 370

Query: 257 YNLKP-------------------------------NLVTYNAVIDACGKGGVDFKHVVE 285
            ++ P                                 VTY ++I    +     K+ ++
Sbjct: 371 PDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNKRS-KNAID 429

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +F++M  +G  PD  T   LLA   +    E A  L+ +M  RG   +   +  +L    
Sbjct: 430 VFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYG 489

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
              ++  A ++ A +  + +  + + Y TMI  Y +A +L++A  +FSEMK
Sbjct: 490 DARKIREAEDMFAALKLEGLDGDEL-YLTMIRIYERASKLNEASRLFSEMK 539


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 209/443 (47%), Gaps = 39/443 (8%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V  F+ +I    R+G   EA  + + M       + +TY  ++   C  G VD       
Sbjct: 275 VQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARA--- 331

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL-FNEMVHRGIDQDIFTYNTLLDAIC 345
              +L     P+ + +N+L++     G +E A++L +N MV  G + D +T+N ++D + 
Sbjct: 332 ---LLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLV 388

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K   +  A E++ EM AK   PNV+TY+ +I+G+ K GRL++A  + + M   G+ L+ V
Sbjct: 389 KKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTV 448

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            YN ++    K G  EEAL +  EM   G + D  T+N+L+ G  K  K +E   ++  M
Sbjct: 449 GYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDM 508

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             + V  N +TY+TL+  +      ++A ++  E    G   D + Y+ LI ALCK G V
Sbjct: 509 FLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAV 568

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           E  + L +EM  +GI P +++ N +I    R+      V+D  + L              
Sbjct: 569 EKGLGLFEEMLGKGIFPTIISCNILISGLCRTG----KVNDALKFL-------------- 610

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
              +D+   G T +  I  +  L+      G  +            +F K+    I+P+ 
Sbjct: 611 ---QDMIHRGLTPD--IVTYNSLINGLCKMGHVQEASN--------LFNKLQSEGIRPDA 657

Query: 646 VTFSAILNACSRCNSFEDASMLL 668
           +T++ +++       F DA +LL
Sbjct: 658 ITYNTLISRHCHEGMFNDACLLL 680



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 139/568 (24%), Positives = 243/568 (42%), Gaps = 48/568 (8%)

Query: 168 NRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLG-KVDLAKNIFETA-LNEGYG 225
           N  EW + ++   F +K+  R      ++   +  L  L   +  +  +F+ A   +GY 
Sbjct: 39  NETEWERLLK--PFDLKQLRRSLSLTPISPFQLCKLLELPLDIPTSMELFQRAGAQKGYS 96

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
           +T  A   LI   G  G  +    +   MK   L      +  ++   GK G+  +    
Sbjct: 97  HTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRL 156

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           + D        P   ++N +L +   G     A N+F +M+ RG+   ++T+  ++ A+C
Sbjct: 157 LLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALC 216

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
             +++D A  ++ +M      PN V Y T+I    +  R+ +AL +  +M  +    D  
Sbjct: 217 MVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQ 276

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           ++N V+    + GR  EA  +   M   G   DA+TY  L+ G  + G+ DE R +  ++
Sbjct: 277 TFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI 336

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQ-IFREFKQAGLKADVVLYSALIDALCKNGL 524
                +PN + Y+TLI  Y   G ++EA   ++     AG + D   ++ +ID L K G 
Sbjct: 337 P----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGY 392

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMC 584
           + SA+ LL+EM  +   PNV+TY  +I+ F +               G+ +E+A +    
Sbjct: 393 LVSALELLNEMVAKRFEPNVITYTILINGFCKQ--------------GRLEEAAEIVNSM 438

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
           S     +   G         +  L+      G  E          L +F +M     KP+
Sbjct: 439 SAKGLSLNTVG---------YNCLICALCKDGNIEEA--------LQLFGEMSGKGCKPD 481

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELRL---FDNQVY--GVAHGLLMGYRDNIWVQALS 699
           + TF++++N   + +  E+A  L  ++ L     N V    + H  LM  RD+I  QA  
Sbjct: 482 IYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLM--RDSIQ-QAFK 538

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFG 727
           L DE+        +  YN L   L   G
Sbjct: 539 LVDEMLFRGCPLDNITYNGLIKALCKTG 566



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 172/368 (46%), Gaps = 37/368 (10%)

Query: 190 NDQGKLASAMISILGRLGKVDLAKNI-FETALNEGYGNTVYAFSALISAYGRSGYCQEAI 248
           N    L + +IS     G+ + AK++ +   +  GY    Y F+ +I    + GY   A+
Sbjct: 338 NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSAL 397

Query: 249 SVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
            + N M     +PN++TY  +I+   K G   +   EI + M   G+  + + +N L+  
Sbjct: 398 ELLNEMVAKRFEPNVITYTILINGFCKQG-RLEEAAEIVNSMSAKGLSLNTVGYNCLICA 456

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
             + G  E A  LF EM  +G   DI+T+N+L++ +CK  +M+ A  +  +M  + +  N
Sbjct: 457 LCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIAN 516

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK-------LGRFE 421
            VTY+T++  +     +  A  +  EM F G  LD ++YN ++    K       LG FE
Sbjct: 517 TVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFE 576

Query: 422 E----------------------------ALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           E                            AL   ++M   G+  D VTYN+L+ G  K G
Sbjct: 577 EMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMG 636

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
              E   +F +++++ + P+ +TY+TLI  +   G++ +A  +  +   +G   + V +S
Sbjct: 637 HVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWS 696

Query: 514 ALIDALCK 521
            LI+ + K
Sbjct: 697 ILINYIVK 704


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 137/568 (24%), Positives = 255/568 (44%), Gaps = 84/568 (14%)

Query: 179 FAFAVKREERKNDQGKLA----SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSAL 234
           F   + R+  K+D  KL+    + ++++L R G VD    ++   L E     +Y F+ +
Sbjct: 139 FVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLM 198

Query: 235 ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA-VIDACGKGGVDFKHVVEIFDDMLRN 293
           I+ Y + G+ +EA      M +  L P+  T  + ++  C    VD      +F++M   
Sbjct: 199 INVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVD--SAFRVFEEM--- 253

Query: 294 GVQPDR--ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
              P+R  +++N L+      G  + A +LF  M       +++TY  L+  +C+   + 
Sbjct: 254 ---PNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVH 309

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A  ++ EM  +N+ P+++TY+++I G  +AG LD A  + S MK  G+  D+ +Y   +
Sbjct: 310 KAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFI 369

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
               K  R EEA  +   +   G+  + + Y+ L+ GY K GK DE   +FE+M +   S
Sbjct: 370 DFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCS 429

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV--------------------- 510
           PN  T++ LI      G  KEA+ +F +  + GLK  V                      
Sbjct: 430 PNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKC 489

Query: 511 --------------LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
                          Y+A I+  C  G V+ A  ++ +M +EG+ P+  TY S+I A+G+
Sbjct: 490 LQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGK 549

Query: 557 SATTECTVDDVERDLGKQKESAN---LDAMCSQDDKD--VQEAGRTDNQIIKVFG----- 606
              T    D ++       E ++   L  +    DK   V+++G T  + +  FG     
Sbjct: 550 LGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGS 609

Query: 607 ------------QLVAEKAGQG-KKENRCRQEIL----------CILGVFQKMHKLKIKP 643
                       +L  E    G   +++C ++++            L +  +M K  I P
Sbjct: 610 NMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISP 669

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEEL 671
           + + F+A+++ C +   + +A+ ++E++
Sbjct: 670 SEMVFNAVISCCCKLQKYGEAANIVEDM 697



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 169/383 (44%), Gaps = 30/383 (7%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + S +I    ++GKVD A  +FE  L++      Y F+ALI     +G  +EA+S+F+ M
Sbjct: 399 MYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQM 458

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
            +  LKP + T+N +I    K G DF    +    M+ +G +P   T+N+ + V    G 
Sbjct: 459 VKMGLKPTVYTFNILIGRMLKQG-DFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGK 517

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            + A ++  +M   G+  D FTY +L+ A  K      AF+++  M   +  P+  T+ +
Sbjct: 518 VQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLS 577

Query: 375 MIDGY-------AKAG----------------------RLDDALNMFSEMKFLGIGLDRV 405
           +I           K+G                        D  + +F EM+  G   D  
Sbjct: 578 LIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSK 637

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            Y  ++S   K+     AL +  +M+  GI    + +NA++    K  KY E   + E M
Sbjct: 638 CYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDM 697

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
                SP L    TLI    + G  +    +F++ +  G   D + +  LID + K GLV
Sbjct: 698 ICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLV 757

Query: 526 ESAVSLLDEMTKEGIRPNVVTYN 548
           E    L +EM K G   +  TY+
Sbjct: 758 EEFSQLFEEMEKNGCNFSPRTYS 780


>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
 gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
          Length = 440

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 200/407 (49%), Gaps = 24/407 (5%)

Query: 144 DILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISIL 203
           D+LKKFE    G   Y F         EW++          ++   N   K    +I  L
Sbjct: 27  DVLKKFEN--AGMVAYRFF--------EWAE----------KQRHYNHSVKAFHTVIDSL 66

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
            ++ +  L  ++ +   ++   N V  F  ++  Y R+   +EA+  FN M +Y++ PNL
Sbjct: 67  AKIRQYQLMWDVVKVMKSKRMVN-VETFCIIMRKYARAQKVEEAVYTFNIMDKYDVPPNL 125

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
             +N ++ A  K   + +   EIFD  +++   PD  T++ LL    +      AR +F 
Sbjct: 126 AAFNGLLSALCKSK-NVRKAQEIFDS-IKDRFVPDSKTYSILLEGWGKDPNLPKAREIFR 183

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           EMV  G   DI TY  ++D +CK  ++D A  I+ EM +    P    YS ++  Y    
Sbjct: 184 EMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIEN 243

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           R++DA++ F EM+  GI  D   YN ++  + K  R +    V  EM+  G+  ++ T+N
Sbjct: 244 RIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFN 303

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            +L     +G+ DE  R+F +M   C  P+  TY+ +I ++ +    K+A+++++  K  
Sbjct: 304 IILSSLIGRGETDEAYRVFLRMIKVC-EPDADTYTMMIKMFCERDELKKALKVWKYMKLK 362

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
                +  +  LI+ LC+ G V  A  LL+EM ++GIRP+ VT+  +
Sbjct: 363 RFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRL 409



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/381 (23%), Positives = 167/381 (43%), Gaps = 71/381 (18%)

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            R  +  +  ++T++D++ K  Q  L ++++  M +K +  NV T+  ++  YA+A +++
Sbjct: 49  QRHYNHSVKAFHTVIDSLAKIRQYQLMWDVVKVMKSKRMV-NVETFCIIMRKYARAQKVE 107

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A+  F+ M    +  +  ++N +LS   K     +A  +   ++   +  D+ TY+ LL
Sbjct: 108 EAVYTFNIMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDRFV-PDSKTYSILL 166

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI---------- 496
            G+GK     + R +F +M ++   P+++TY  ++DV  K G   EA+ I          
Sbjct: 167 EGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCK 226

Query: 497 -------------------------FREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
                                    F E +  G++ DV +Y+ALI A CK   +++   +
Sbjct: 227 PTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRV 286

Query: 532 LDEMTKEGIRPNVVTYNSIIDAF-GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
           L+EM  +G+ PN  T+N I+ +  GR  T E             +    +  +C  D   
Sbjct: 287 LNEMDCKGVTPNSRTFNIILSSLIGRGETDEA-----------YRVFLRMIKVCEPD--- 332

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
                 T   +IK+F +               R E+   L V++ M   +  P++ TF  
Sbjct: 333 ----ADTYTMMIKMFCE---------------RDELKKALKVWKYMKLKRFMPSMHTFQV 373

Query: 651 ILNACSRCNSFEDASMLLEEL 671
           ++N          A +LLEE+
Sbjct: 374 LINGLCEKGDVTQACVLLEEM 394



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 118/267 (44%), Gaps = 2/267 (0%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
            K  S ++   G+   +  A+ IF   ++ G    +  +  ++    ++G   EA+ + N
Sbjct: 159 SKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVN 218

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            M     KP    Y+ ++   G      +  V  F +M  NG++PD   +N+L+    + 
Sbjct: 219 EMDSTVCKPTPFIYSVLVHTYGIEN-RIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKA 277

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              +    + NEM  +G+  +  T+N +L ++    + D A+ +   M  K   P+  TY
Sbjct: 278 NRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRM-IKVCEPDADTY 336

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + MI  + +   L  AL ++  MK         ++  +++   + G   +A ++ +EM  
Sbjct: 337 TMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIE 396

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVR 459
            GIR   VT+  L     K+G+ D ++
Sbjct: 397 KGIRPSGVTFGRLRQLLIKEGREDVLK 423


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 235/500 (47%), Gaps = 40/500 (8%)

Query: 190 NDQGKLASAMISIL----GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           +D G  + A++ +L     + G+V  A  +     + G   ++   +AL+    R+    
Sbjct: 40  SDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMA 99

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
               V   M    + P++ TY+ +I+A  K   +F    ++  +M   G   + +T+N L
Sbjct: 100 LLWKVREFMVGAGISPDVYTYSTLIEAYCKVR-EFDTAKKVLVEMRERGCGLNTVTYNVL 158

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +A   R G  E A     +M   G+  D FTY  L++ +CK  + + A  ++ EM    +
Sbjct: 159 IAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAEL 218

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            PNVV Y+ +IDG+ + G  D+A  M  EM   G+  ++++Y+ ++    K+G+ + A L
Sbjct: 219 KPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASL 278

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + K+M     R D +TYN ++ G+ +     +  R+  +M+   +SPN+ TYS +I    
Sbjct: 279 LLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLC 338

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           + G  ++A  +  E    GLK +  +Y+ LI   C+ G V  A  + D+MTK  + P++ 
Sbjct: 339 QSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLY 398

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
            YNS+I  FG S             +G+ +ES    A        +QE G   N+    +
Sbjct: 399 CYNSLI--FGLS------------KVGRVEESTKYFA-------QMQERGLLPNEF--TY 435

Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
             L+      G  E+  +        + Q+M    +KPN V +  +L +  + +  E  S
Sbjct: 436 SGLIHGYLKNGDLESAEQ--------LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 487

Query: 666 ----MLLEELRLFDNQVYGV 681
                +L++  + DN++YG+
Sbjct: 488 STFKSMLDQGVMLDNRIYGI 507



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 211/482 (43%), Gaps = 69/482 (14%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY-NAVIDACGKGGVDFKHVVEI 286
           V  ++ LI  + R G   EA  +   M    ++PN +TY N V   C  G +D   +  +
Sbjct: 222 VVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASL--L 279

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M+R+  +PD IT+N ++    R    + A  L +EM + GI  +++TY+ ++  +C+
Sbjct: 280 LKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 339

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             + + A +++ EM  K + PN   Y+ +I GY + G +  A  +F +M  + +  D   
Sbjct: 340 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 399

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN+++   +K+GR EE+     +M+  G+  +  TY+ L+ GY K G  +   ++ ++M 
Sbjct: 400 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 459

Query: 467 ADCVSPNLLTYSTLIDVY-----------------------------------SKGGLYK 491
              + PN + Y  L++ Y                                   S  G  +
Sbjct: 460 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 519

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            A ++  E ++ G   DV +YS+LI  LCK    E A  +LDEM+K+G+ PN+V YN++I
Sbjct: 520 AAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 579

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
           D   +S            D+   +   N           +   G   N +   +  L+  
Sbjct: 580 DGLCKSG-----------DISYARNVFN----------SILAKGLVPNCV--TYTSLIDG 616

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               G   N           ++ +M    I P+   +S +   CS     E A  L+EE+
Sbjct: 617 SCKVGDISNA--------FYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 668

Query: 672 RL 673
            L
Sbjct: 669 FL 670



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 190/427 (44%), Gaps = 49/427 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  L ++G+V+ +   F      G     + +S LI  Y ++G  + A  +   M  
Sbjct: 401 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 460

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             LKPN V Y  ++++  K   D + V   F  ML  GV  D   +  L+   S  G  E
Sbjct: 461 TGLKPNDVIYIDLLESYFKSD-DIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 519

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AA  + +E+   G   D+  Y++L+  +CK A  + AF I+ EM  K + PN+V Y+ +I
Sbjct: 520 AAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 579

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  K+G +  A N+F+ +   G+  + V+Y +++    K+G    A  +  EM ++GI 
Sbjct: 580 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGIT 639

Query: 437 KDAVTY----------------------------------NALLGGYGKQGKYDEVRRMF 462
            DA  Y                                  N L+ G+ K+GK  E  ++ 
Sbjct: 640 PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLL 699

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
             +    + PN LT   +I   S+ G   E   IF E +Q   ++    +S+L   +   
Sbjct: 700 HVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 759

Query: 523 GLVESAVSLLDEMT----KEGIRPNVVTYNSIIDAFGRSATTECT-----VDDVERDLGK 573
           G +   + ++D+M     KEG     +    +I A  +SA   C+     VD++ R  GK
Sbjct: 760 GKI--PLDVVDDMIRDHCKEGNLDKALMLRDVIVA--KSAPMGCSSYLAIVDNLCRK-GK 814

Query: 574 QKESANL 580
             E+ NL
Sbjct: 815 LSEALNL 821



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 167/363 (46%), Gaps = 29/363 (7%)

Query: 191 DQG-----KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           DQG     ++   +I  L   G ++ A  +       G    V+ +S+LIS   ++   +
Sbjct: 495 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADRE 554

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           +A  + + M +  + PN+V YNA+ID   K G D  +   +F+ +L  G+ P+ +T+ SL
Sbjct: 555 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSG-DISYARNVFNSILAKGLVPNCVTYTSL 613

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +    + G    A  L+NEM+  GI  D F Y+ L         ++ A  ++ EM  +  
Sbjct: 614 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG- 672

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
             ++ +++ ++DG+ K G++ + L +   +   G+  + ++   ++S  ++ G+  E   
Sbjct: 673 HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHT 732

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGK--YDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
           +  E++       A  +++L      QGK   D V  M   ++  C   NL     L DV
Sbjct: 733 IFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDM---IRDHCKEGNLDKALMLRDV 789

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG-IRP 542
                       I  +    G  +    Y A++D LC+ G +  A++LL EM K G ++P
Sbjct: 790 ------------IVAKSAPMGCSS----YLAIVDNLCRKGKLSEALNLLKEMDKRGNLQP 833

Query: 543 NVV 545
            +V
Sbjct: 834 TLV 836



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 153/339 (45%), Gaps = 29/339 (8%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK---LASAMISILGRLGKVDLAKNI 215
           Y  L+  L + G    A     F V  E  KN       + S++IS L +    + A  I
Sbjct: 505 YGILIHNLSSSGNMEAA-----FRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGI 559

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
            +    +G    +  ++ALI    +SG    A +VFNS+    L PN VTY ++ID   K
Sbjct: 560 LDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCK 619

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            G D  +   ++++ML  G+ PD   ++ L   CS  G  E A  L  EM  RG    I 
Sbjct: 620 VG-DISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASIS 677

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           ++N L+D  CK  +M    +++  +  + + PN +T   +I G ++AG+L +   +F E+
Sbjct: 678 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 737

Query: 396 K----------FLGIGLDRVSYNTV--------LSIYAKLGRFEEALLVCKEMESSGIRK 437
           +          F  + +D ++   +        +  + K G  ++AL++   + +     
Sbjct: 738 QQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPM 797

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQM-KADCVSPNLL 475
              +Y A++    ++GK  E   + ++M K   + P L+
Sbjct: 798 GCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLV 836


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 193/361 (53%), Gaps = 3/361 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    R  ++ LA +     +  G+  ++  F +L++ +      QEA+S+ + +  
Sbjct: 112 STLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVG 171

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              +PN+V YN +ID+ C    VD    +++ + M + G++PD IT+NSL+      G W
Sbjct: 172 LGYEPNVVIYNTIIDSLCENRQVD--TALDVLNHMEKMGIRPDVITYNSLITRLFHSGKW 229

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             +  + ++M+  GI  D+ T++ ++D   K  Q+  A +   EM  +++ PN+VTY+++
Sbjct: 230 GVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSL 289

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+G    G LD+A  + + M   G   + V+YNT+++ Y K  R ++A+ +   M   G+
Sbjct: 290 INGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGV 349

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  TYN L  GY + G+++   ++  +M +  V P++ T++ L+D   + G  ++A+ 
Sbjct: 350 DGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALV 409

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
              + +++     ++ Y+ +I  +CK   VE A  L   +  +G+ P+V+TY +++    
Sbjct: 410 KLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLR 469

Query: 556 R 556
           R
Sbjct: 470 R 470



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 180/341 (52%), Gaps = 8/341 (2%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           + ++  A ++ +  +  GY   V  ++ +I +   +     A+ V N M++  ++P+++T
Sbjct: 156 VNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVIT 215

Query: 266 YNAVIDAC---GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           YN++I      GK GV  +    I  DM+R G+ PD ITF++++ V  + G    A+  +
Sbjct: 216 YNSLITRLFHSGKWGVSAR----ILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQY 271

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           +EM+ R +D +I TYN+L++ +C    +D A +++  M +K   PN VTY+T+++GY K+
Sbjct: 272 DEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKS 331

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
            R+DDA+ +   M   G+  D  +YNT+   Y + G+F  A  V   M S G+  D  T+
Sbjct: 332 KRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTF 391

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           N LL G  + GK ++     E ++       ++TY+ +I    K    ++A  +F     
Sbjct: 392 NMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLAL 451

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK-EGIRP 542
            G+  DV+ Y+ ++  L +  L   A  L  +M K +G+ P
Sbjct: 452 KGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 197/399 (49%), Gaps = 31/399 (7%)

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G   + F   + +F DM  +   P  + F+ LL   ++   +EA  +LF  +   GI  D
Sbjct: 48  GLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHD 107

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           +++++TL+D  C+ +++ LA   + +M      P++VT+ ++++G+    R+ +A+++  
Sbjct: 108 LYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVD 167

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           ++  LG   + V YNT++    +  + + AL V   ME  GIR D +TYN+L+      G
Sbjct: 168 QIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSG 227

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           K+    R+   M    + P+++T+S +IDV+ K G   EA + + E  Q  +  ++V Y+
Sbjct: 228 KWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYN 287

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           +LI+ LC +GL++ A  +L+ M  +G  PN VTYN++++ + +S      VDD       
Sbjct: 288 SLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSK----RVDDA------ 337

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
                 +  +C      V     T N + + + Q     AGQ     +          V 
Sbjct: 338 ------MKILCVMSHDGVDGDTFTYNTLYQGYCQ-----AGQFNAAEK----------VL 376

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            +M    + P++ TF+ +L+        E A + LE+L+
Sbjct: 377 ARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQ 415



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 185/371 (49%), Gaps = 13/371 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++  + +L K +   ++F      G  + +Y+FS LI  + R      A+S    M +
Sbjct: 77  SRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMK 136

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHV------VEIFDDMLRNGVQPDRITFNSLLAVCS 310
              +P++VT+ ++++        F HV      + + D ++  G +P+ + +N+++    
Sbjct: 137 LGFEPSIVTFGSLVNG-------FCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 189

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
                + A ++ N M   GI  D+ TYN+L+  +    +  ++  I+++M    I P+V+
Sbjct: 190 ENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVI 249

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           T+S MID + K G+L +A   + EM    +  + V+YN++++     G  +EA  V   M
Sbjct: 250 TFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFM 309

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
            S G   +AVTYN L+ GY K  + D+  ++   M  D V  +  TY+TL   Y + G +
Sbjct: 310 VSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQF 369

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             A ++       G+  D+  ++ L+D LC++G +E A+  L+++ K      ++TYN I
Sbjct: 370 NAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNII 429

Query: 551 IDAFGRSATTE 561
           I    ++   E
Sbjct: 430 IKGMCKANKVE 440



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 174/349 (49%), Gaps = 2/349 (0%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           ++  FS L+ A  +    +  IS+F  ++   +  +L +++ +ID C          +  
Sbjct: 72  SIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLID-CFCRCSRLSLALSC 130

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M++ G +P  +TF SL+         + A +L +++V  G + ++  YNT++D++C+
Sbjct: 131 LGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 190

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             Q+D A +++  M    I P+V+TY+++I     +G+   +  + S+M  +GI  D ++
Sbjct: 191 NRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVIT 250

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           ++ ++ ++ K G+  EA     EM    +  + VTYN+L+ G    G  DE +++   M 
Sbjct: 251 FSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMV 310

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
           +    PN +TY+TL++ Y K     +AM+I       G+  D   Y+ L    C+ G   
Sbjct: 311 SKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFN 370

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           +A  +L  M   G+ P++ T+N ++D        E  +  +E DL K +
Sbjct: 371 AAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLE-DLQKSE 418


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 197/394 (50%), Gaps = 5/394 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  LG +G+  +      FA+      N  G   + +I  L +   VD A+ +   
Sbjct: 347 YTALMDWLGKQGKTDEVKDTLRFALSDNLSLN--GVTYTVLIDALCKAHNVDEAEQVLLE 404

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK-GG 277
              +     V  FS++I+ + + G   +A      MK   + PN+VTY  +ID   K  G
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            D    +E++ DML  GV+ ++   +SL+    + G  E A  LF +    G+  D   Y
Sbjct: 465 QD--AALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TL+D + K   M  AF+   E+  +N+ P+ V Y+  I+     G+  +A ++ +EM+ 
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRN 582

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           +G+  D+ +YNT++  + + G   +AL +  EM+ S I+ + +TYN L+ G    G  ++
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            + +  +M +   SP+ LT+  ++   S+       + I      AGL AD+ +Y+ L+ 
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            LC +G+   A  +L+EM   GI P+ +T+N++I
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 182/356 (51%), Gaps = 1/356 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R   V+ A +++E  +  G    V   SAL++   R G   EA ++F  M +    PN V
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHV 310

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TY  +ID+  K G   K ++ +  +M+  GV  D +T+ +L+    + G  +  ++    
Sbjct: 311 TYCTLIDSLAKAGRG-KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF 369

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
            +   +  +  TY  L+DA+CK   +D A +++ EM  K+ISPNVVT+S++I+G+ K G 
Sbjct: 370 ALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL 429

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD A      MK  GI  + V+Y T++  + K    + AL V  +M   G+  +    ++
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDS 489

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G  + GK +E   +F+      +S + + Y+TLID   K G    A +  +E     
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           +  D V+Y+  I+ LC  G  + A S+L EM   G++P+  TYN++I +  R   T
Sbjct: 550 MLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGET 605



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 229/497 (46%), Gaps = 35/497 (7%)

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +++ +N +I    + G D    + + D M   G+  D + +N+L+A   R G  +AAR +
Sbjct: 168 DVIGWNTLIAGYCRVG-DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGV 226

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            + M   G+D ++ TY   +   C+   ++ AF++   M    +  +VVT S ++ G  +
Sbjct: 227 LDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCR 286

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            GR  +A  +F EM  +G   + V+Y T++   AK GR +E L +  EM S G+  D VT
Sbjct: 287 DGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVT 346

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y AL+   GKQGK DEV+       +D +S N +TY+ LID   K     EA Q+  E +
Sbjct: 347 YTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEME 406

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF----GRS 557
           +  +  +VV +S++I+   K GL++ A      M + GI PNVVTY ++ID F    G+ 
Sbjct: 407 EKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQD 466

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
           A  E   D +    G +     +D++ +         G   N  I+    L  + +G G 
Sbjct: 467 AALEVYHDMLCE--GVEVNKFIVDSLVN---------GLRQNGKIEEAMALFKDASGSGL 515

Query: 618 KENRCRQEILCILGVF------------QKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
             +      L I G+F            Q++    + P+ V ++  +N       F++A 
Sbjct: 516 SLDHVNYTTL-IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAK 574

Query: 666 MLLEELRLF----DNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
            +L E+R      D   Y     ++   R     +AL L  E+K+         YN L  
Sbjct: 575 SILTEMRNMGLKPDQSTYNTM--IVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 722 MLWHFGQKRGAQLVVLE 738
            L+  G    A+ ++ E
Sbjct: 633 GLFGTGAVEKAKYLLNE 649



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 197/405 (48%), Gaps = 7/405 (1%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKN-DQGKLASAMISILGRLGKVDLAKNIF 216
           +YT L+  L   G+   A   F F  +  +R       + +  I+ L  LGK   AK+I 
Sbjct: 521 NYTTLIDGLFKAGDMPTA---FKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSIL 577

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC-GK 275
               N G       ++ +I ++ R G   +A+ + + MK  ++KPNL+TYN ++    G 
Sbjct: 578 TEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGT 637

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G V+      + ++M+  G  P  +T   +L  CS+    +   ++   M++ G+  DI 
Sbjct: 638 GAVE--KAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADIT 695

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            YNTLL  +C       A  ++ EM    I+P+ +T++ +I G+ K+  LD+A   +++M
Sbjct: 696 VYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQM 755

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
               I  +  ++NT+L     +GR  EA  V  EME SG+  + +TY+ L+ G+GKQ   
Sbjct: 756 LHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNK 815

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            E  R++ +M      P + TY+ LI  ++K G+  +A ++F++ ++ G+      Y  L
Sbjct: 816 VEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDIL 875

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           +    +          L +M ++G  P+  T + I  AF +   T
Sbjct: 876 VSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 236/498 (47%), Gaps = 43/498 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+   R+G    A ++ +    +G    V  ++ L++ + R+G    A  V + MK 
Sbjct: 173 NTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKE 232

Query: 257 YNLKPNLVTYNA-VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + PN+ TY   ++  C   GV+     ++++ M+RNGV  D +T ++L+A   R G +
Sbjct: 233 AGVDPNVATYTPFIVYYCRTKGVE--EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  LF EM   G   +  TY TL+D++ K  +      ++ EM ++ +  ++VTY+ +
Sbjct: 291 SEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +D   K G+ D+  +         + L+ V+Y  ++    K    +EA  V  EME   I
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + VT+++++ G+ K+G  D+       MK   ++PN++TY TLID + K      A++
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALE 470

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-- 553
           ++ +    G++ +  +  +L++ L +NG +E A++L  + +  G+  + V Y ++ID   
Sbjct: 471 VYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLF 530

Query: 554 ----------FG-----RSATTECTVDDVERD----LGKQKESANLDAMCSQDDKDVQEA 594
                     FG     R+   +  V +V  +    LGK KE+ ++  +    +  ++  
Sbjct: 531 KAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSI--LTEMRNMGLKPD 588

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILN 653
             T N +I                 + CR+ E    L +  +M    IKPN++T++ ++ 
Sbjct: 589 QSTYNTMIV----------------SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 654 ACSRCNSFEDASMLLEEL 671
                 + E A  LL E+
Sbjct: 633 GLFGTGAVEKAKYLLNEM 650



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 178/365 (48%), Gaps = 3/365 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           +  ++++ L + GK++ A  +F+ A   G       ++ LI    ++G    A      +
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
              N+ P+ V YN  I+  C  G   FK    I  +M   G++PD+ T+N+++    R G
Sbjct: 546 MDRNMLPDAVVYNVFINCLCILG--KFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKG 603

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
               A  L +EM    I  ++ TYNTL+  +     ++ A  ++ EM +   SP+ +T+ 
Sbjct: 604 ETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            ++   +++ RLD  L++   M   G+  D   YNT+L +    G   +A +V +EM  S
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI  D +T+NAL+ G+ K    D     + QM    +SPN+ T++TL+      G   EA
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             +  E +++GL+ + + Y  L+    K      A+ L  EM  +G  P V TYN++I  
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 554 FGRSA 558
           F ++ 
Sbjct: 844 FTKAG 848



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 166/366 (45%), Gaps = 49/366 (13%)

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +P  + +N LLA  S       A  +  EM  RG+  D  T NTLL  +C+  Q+D A  
Sbjct: 100 RPTTVAYNILLAALSD---HAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAA-A 155

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
            +A+      + +V+ ++T+I GY + G    AL++   M   G+ +D V YNT+++ + 
Sbjct: 156 ALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           + G+ + A  V   M+ +G+  +  TY   +  Y +    +E   ++E M  + V  +++
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           T S L+    + G + EA  +FRE  + G   + V Y  LID+L K G  +  +SLL EM
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDD 588
              G+  ++VTY +++D  G+   T+  V D  R       S N       +DA+C   +
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTD-EVKDTLRFALSDNLSLNGVTYTVLIDALCKAHN 394

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
            D  E                                      V  +M +  I PNVVTF
Sbjct: 395 VDEAEQ-------------------------------------VLLEMEEKSISPNVVTF 417

Query: 649 SAILNA 654
           S+++N 
Sbjct: 418 SSVING 423


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 196/394 (49%), Gaps = 5/394 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  LG +G+  +      FA+      N  G   + +I  L +   VD A+ +   
Sbjct: 347 YTALMDWLGKQGKTDEVKDTLRFALSDNLSPN--GVTYTVLIDALCKAHNVDEAEQVLLE 404

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK-GG 277
              +     V  FS++I+ + + G   +A      MK   + PN+VTY  +ID   K  G
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            D    +E++ DML  GV+ ++   +SL+    + G  E A  LF +    G+  D   Y
Sbjct: 465 QD--AALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            TL+D + K   M  AF+   E+  +N+ P+ V Y+  I+     G+  +A +  +EM+ 
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           +G+  D+ +YNT++  + + G   +AL +  EM+ S I+ + +TYN L+ G    G  ++
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            + +  +M +   SP+ LT+  ++   S+       + I      AGL AD+ +Y+ L+ 
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            LC +G+   A  +L+EM   GI P+ +T+N++I
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 229/497 (46%), Gaps = 35/497 (7%)

Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +++ +N +I    + G D    + + D M   G+  D + +N+L+A   R G  +AAR +
Sbjct: 168 DVIGWNTLIAGYCRVG-DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGV 226

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            + M   G+D ++ TY   +   C+   ++ AF++   M    +  +VVT S ++ G  +
Sbjct: 227 LDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCR 286

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            GR  +A  +F EM  +G   + V+Y T++   AK GR +E L +  EM S G+  D VT
Sbjct: 287 DGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVT 346

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y AL+   GKQGK DEV+       +D +SPN +TY+ LID   K     EA Q+  E +
Sbjct: 347 YTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEME 406

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF----GRS 557
           +  +  +VV +S++I+   K GL++ A      M + GI PNVVTY ++ID F    G+ 
Sbjct: 407 EKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQD 466

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
           A  E   D +    G +     +D++ +         G   N  I+    L  + +G G 
Sbjct: 467 AALEVYHDMLCE--GVKVNKFIVDSLVN---------GLRQNGKIEEAMALFKDASGSGL 515

Query: 618 KENRCRQEILCILGVF------------QKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
             +      L I G+F            Q++    + P+ V ++  +N       F++A 
Sbjct: 516 SLDHVNYTTL-IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 666 MLLEELRLF----DNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
             L E+R      D   Y     ++   R     +AL L  E+K+         YN L  
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTM--IVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 722 MLWHFGQKRGAQLVVLE 738
            L+  G    A+ ++ E
Sbjct: 633 GLFGTGAVEKAKYLLNE 649



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 182/356 (51%), Gaps = 1/356 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R   V+ A +++E  +  G    V   SAL++   R G   EA ++F  M +    PN V
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TY  +ID+  K G   K ++ +  +M+  GV  D +T+ +L+    + G  +  ++    
Sbjct: 311 TYCTLIDSLAKAGRG-KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF 369

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
            +   +  +  TY  L+DA+CK   +D A +++ EM  K+ISPNVVT+S++I+G+ K G 
Sbjct: 370 ALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL 429

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           LD A      MK  GI  + V+Y T++  + K    + AL V  +M   G++ +    ++
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G  + GK +E   +F+      +S + + Y+TLID   K G    A +  +E     
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           +  D V+Y+  I+ LC  G  + A S L EM   G++P+  TYN++I +  R   T
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGET 605



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 234/498 (46%), Gaps = 43/498 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+   R+G    A ++ +    +G    V  ++ L++ + R+G    A  V + MK 
Sbjct: 173 NTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKE 232

Query: 257 YNLKPNLVTYNA-VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + PN+ TY   ++  C   GV+     ++++ M+RNGV  D +T ++L+A   R G +
Sbjct: 233 AGVDPNVATYTPFIVYYCRTKGVE--EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  LF EM   G   +  TY TL+D++ K  +      ++ EM ++ +  ++VTY+ +
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +D   K G+ D+  +         +  + V+Y  ++    K    +EA  V  EME   I
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + VT+++++ G+ K+G  D+       MK   ++PN++TY TLID + K      A++
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALE 470

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-- 553
           ++ +    G+K +  +  +L++ L +NG +E A++L  + +  G+  + V Y ++ID   
Sbjct: 471 VYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLF 530

Query: 554 ----------FG-----RSATTECTVDDVERD----LGKQKESANLDAMCSQDDKDVQEA 594
                     FG     R+   +  V +V  +    LGK KE+ +   +    +  ++  
Sbjct: 531 KAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF--LTEMRNMGLKPD 588

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILN 653
             T N +I                 + CR+ E    L +  +M    IKPN++T++ ++ 
Sbjct: 589 QSTYNTMIV----------------SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 654 ACSRCNSFEDASMLLEEL 671
                 + E A  LL E+
Sbjct: 633 GLFGTGAVEKAKYLLNEM 650



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 179/361 (49%), Gaps = 7/361 (1%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKN-DQGKLASAMISILGRLGKVDLAKNIF 216
           +YT L+  L   G+   A   F F  +  +R       + +  I+ L  LGK   AK+  
Sbjct: 521 NYTTLIDGLFKAGDMPTA---FKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFL 577

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC-GK 275
               N G       ++ +I ++ R G   +A+ + + MK  ++KPNL+TYN ++    G 
Sbjct: 578 TEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGT 637

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G V+      + ++M+  G  P  +T   +L  CS+    +   ++   M++ G+  DI 
Sbjct: 638 GAVE--KAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADIT 695

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
            YNTLL  +C       A  ++ EM    I+P+ +T++ +I G+ K+  LD+A   +++M
Sbjct: 696 VYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQM 755

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
               I  +  ++NT+L     +GR  EA  V  EME SG+  + +TY+ L  G+GKQ   
Sbjct: 756 LHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNK 815

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            E  R++ +M      P + TY+ LI  ++K G+  +A ++F++ ++ G+      Y  L
Sbjct: 816 VEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDIL 875

Query: 516 I 516
           +
Sbjct: 876 V 876



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 125/511 (24%), Positives = 224/511 (43%), Gaps = 32/511 (6%)

Query: 180 AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET---ALNEGYGNTVYAFSALIS 236
           A+A+ RE  K           +++  L K    K +       ++ G    +  ++AL+ 
Sbjct: 293 AYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMD 352

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGV 295
             G+ G   E           NL PN VTY  +IDA C    VD     ++  +M    +
Sbjct: 353 WLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD--EAEQVLLEMEEKSI 410

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
            P+ +TF+S++    + GL + A      M  RGI+ ++ TY TL+D   K    D A E
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALE 470

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           +  +M  + +  N     ++++G  + G++++A+ +F +    G+ LD V+Y T++    
Sbjct: 471 VYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLF 530

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K G    A    +E+    +  DAV YN  +      GK+ E +    +M+   + P+  
Sbjct: 531 KAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQS 590

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY+T+I  + + G   +A+++  E K + +K +++ Y+ L+  L   G VE A  LL+EM
Sbjct: 591 TYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEM 650

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEA- 594
              G  P+ +T+  ++ A  +S        DV  D+ +   +A L A  +  +  +Q   
Sbjct: 651 VSAGFSPSSLTHRRVLQACSQSRRL-----DVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 595 --GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG------------VFQKMHKLK 640
             G T    +     ++ E  G G   +      L ILG             + +M    
Sbjct: 706 YHGMTRKATV-----VLEEMLGSGIAPDTITFNAL-ILGHCKSSHLDNAFATYAQMLHQN 759

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           I PN+ TF+ +L          +A  +L E+
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 189/407 (46%), Gaps = 24/407 (5%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           +  ++++ L + GK++ A  +F+ A   G       ++ LI    ++G    A      +
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
              N+ P+ V YN  I+  C  G   FK       +M   G++PD+ T+N+++    R G
Sbjct: 546 MDRNMLPDAVVYNVFINCLCMLG--KFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKG 603

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
               A  L +EM    I  ++ TYNTL+  +     ++ A  ++ EM +   SP+ +T+ 
Sbjct: 604 ETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            ++   +++ RLD  L++   M   G+  D   YNT+L +    G   +A +V +EM  S
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI  D +T+NAL+ G+ K    D     + QM    +SPN+ T++TL+      G   EA
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             +  E +++GL+ + + Y  L     K      A+ L  EM  +G  P V TYN++I  
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 554 FGRSAT------------------TECTVDDVER---DLGKQKESAN 579
           F ++                    T CT D +     DL ++++S N
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQN 890



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 166/366 (45%), Gaps = 49/366 (13%)

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           +P  + +N LLA  S       A  +  EM  RG+  D  T NTLL  +C+  Q+D A  
Sbjct: 100 RPTTVAYNILLAALSD---HAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAA-A 155

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
            +A+      + +V+ ++T+I GY + G    AL++   M   G+ +D V YNT+++ + 
Sbjct: 156 ALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           + G+ + A  V   M+ +G+  +  TY   +  Y +    +E   ++E M  + V  +++
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           T S L+    + G + EA  +FRE  + G   + V Y  LID+L K G  +  +SLL EM
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDD 588
              G+  ++VTY +++D  G+   T+  V D  R       S N       +DA+C   +
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTD-EVKDTLRFALSDNLSPNGVTYTVLIDALCKAHN 394

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
            D  E                                      V  +M +  I PNVVTF
Sbjct: 395 VDEAEQ-------------------------------------VLLEMEEKSISPNVVTF 417

Query: 649 SAILNA 654
           S+++N 
Sbjct: 418 SSVING 423



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 7/199 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++ +L   G    A  + E  L  G       F+ALI  + +S +   A + +  M  
Sbjct: 698 NTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 757

Query: 257 YNLKPNLVTYNAVI---DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            N+ PN+ T+N ++   ++ G+ G        +  +M ++G++P+ +T++ L     +  
Sbjct: 758 QNISPNIATFNTLLGGLESVGRIG----EAGTVLIEMEKSGLEPNNLTYDILATGHGKQS 813

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
               A  L+ EMV +G    + TYN L+    K   M  A E+  +M  + + P   TY 
Sbjct: 814 NKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYD 873

Query: 374 TMIDGYAKAGRLDDALNMF 392
            ++ G+    R   + N +
Sbjct: 874 ILVSGWYDLAREQKSQNTY 892


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/568 (25%), Positives = 252/568 (44%), Gaps = 65/568 (11%)

Query: 200 ISILGRLGKVDL--AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           I + G L K  L   K I    + EG   +   F++L+ AY +S     A  +   M++ 
Sbjct: 348 ILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKC 407

Query: 258 NLKPNLVTYNAVIDACGKGG-----VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
             KP  V YN +I +   GG     V F+   + +++ML  G   +++   S        
Sbjct: 408 ECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF 467

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G +E A  + +EM+  G   D  TY+ ++  +C  ++++ AF +  EM    + P+V TY
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +ID ++KAG +  A N   EM   G     V+Y T++  Y K  +   A  + + M +
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD----------------CVSPNLLT 476
            G   + +TY AL+ GY K G  ++  +++ +M+ D                   PN++T
Sbjct: 588 KGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVT 647

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y  L+D   K    K+A  +       G + + ++Y ALID  CK   ++ A  +  +M 
Sbjct: 648 YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMV 707

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN----------LDAMCSQ 586
           + G  PNV TY+S+ID   +       +D V + L K  E++           +D +   
Sbjct: 708 ERGYNPNVYTYSSLIDRLFKDK----RLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKV 763

Query: 587 DDKD--------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
              D        ++E G   N +       + +  G+  K ++C       L +F++M  
Sbjct: 764 AKTDEAYKLMLMMEEKGCKPNVVTYT---AMIDGFGKAGKVDKC-------LELFREMGS 813

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH-----GLLMGYRDNI 693
               PN VT++ ++N C      ++A  LLEE++    Q Y   H      ++ GY+   
Sbjct: 814 KGCAPNFVTYTVLINHCCATGHLDEAYALLEEMK----QTYWPKHVSSYCKVIEGYKRE- 868

Query: 694 WVQALSLFDEVKLMDSSTASAFYNALTD 721
           ++ +L L +EV+   S+     Y  L D
Sbjct: 869 FILSLGLLEEVEKNGSAPTILLYKVLID 896



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 188/385 (48%), Gaps = 19/385 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    + G +  A N  +  + +G   TV  ++ LI AY ++     A  +F  M  
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM--------------LRNGV--QPDRI 300
               PN++TY A+ID   K G + +   +I+  M              ++N V  +P+ +
Sbjct: 588 KGCFPNVITYTALIDGYCKSG-NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVV 646

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           T+ +L+    +    + AR+L   M   G + +   Y+ L+D  CK A++D A E+  +M
Sbjct: 647 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM 706

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
             +  +PNV TYS++ID   K  RLD  L + S+M       + V Y  ++   +K+ + 
Sbjct: 707 VERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKT 766

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           +EA  +   ME  G + + VTY A++ G+GK GK D+   +F +M +   +PN +TY+ L
Sbjct: 767 DEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVL 826

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I+     G   EA  +  E KQ      V  Y  +I+   +  ++  ++ LL+E+ K G 
Sbjct: 827 INHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGS 884

Query: 541 RPNVVTYNSIIDAFGRSATTECTVD 565
            P ++ Y  +ID F ++   E  ++
Sbjct: 885 APTILLYKVLIDNFVKAGRLEVALE 909



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 198/404 (49%), Gaps = 56/404 (13%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK- 255
           + +I    +  KV +A  +FE  + +G    V  ++ALI  Y +SG  ++A  ++  M+ 
Sbjct: 563 TTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRG 622

Query: 256 -------------RYNL--KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
                        + N+  KPN+VTY A++D   K     K   ++ + M  +G +P+ I
Sbjct: 623 DADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAH-KVKDARDLLETMFVDGCEPNTI 681

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDL-------- 352
            +++L+    +    + A+ +F++MV RG + +++TY++L+D + K  ++DL        
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 353 ---------------------------AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
                                      A+++M  M  K   PNVVTY+ MIDG+ KAG++
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D  L +F EM   G   + V+Y  +++     G  +EA  + +EM+ +   K   +Y  +
Sbjct: 802 DKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKV 861

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + GY ++  +     + E+++ +  +P +L Y  LID + K G  + A+++ +E   A +
Sbjct: 862 IEGYKRE--FILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASM 919

Query: 506 K--ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
              A   LY++LI +      ++ A  L  +M ++G+ P++ T+
Sbjct: 920 SMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTF 963



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 180/379 (47%), Gaps = 23/379 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L    +V+ A  +F+     G    VY ++ LI  + ++G  ++A +  + M R
Sbjct: 493 SEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVR 552

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +P +VTY  +I A  K         E+F+ M+  G  P+ IT+ +L+    + G  E
Sbjct: 553 DGCEPTVVTYTTLIHAYLKAK-KVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIE 611

Query: 317 AARNLFNEMVHRGIDQDI-------------------FTYNTLLDAICKGAQMDLAFEIM 357
            A  ++  M  RG D DI                    TY  L+D +CK  ++  A +++
Sbjct: 612 KACQIYARM--RG-DADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 668

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
             M      PN + Y  +IDG+ KA +LD+A  +F +M   G   +  +Y++++    K 
Sbjct: 669 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKD 728

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
            R +  L V  +M  +    + V Y  ++ G  K  K DE  ++   M+     PN++TY
Sbjct: 729 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 788

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           + +ID + K G   + +++FRE    G   + V Y+ LI+  C  G ++ A +LL+EM +
Sbjct: 789 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 848

Query: 538 EGIRPNVVTYNSIIDAFGR 556
                +V +Y  +I+ + R
Sbjct: 849 TYWPKHVSSYCKVIEGYKR 867



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 129/305 (42%), Gaps = 21/305 (6%)

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV----CSRGGLWEAARN 320
            Y A++D   +G  D      + ++ LR     D+     LL V    C R GLW  A  
Sbjct: 173 VYIALLDVFERGSYD-----RVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALE 227

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
               +   G      TYN L+    +  ++D A  +  EM    +S +  T         
Sbjct: 228 ELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALC 287

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K G+  +AL++  +  F+    + + YN ++S   +   FEEA+     M S+    +  
Sbjct: 288 KVGKWREALSLIEKEDFVP---NTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQ 344

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY  LL G   + +    +R+   M A+   P+   +++L+  Y K   +  A ++ ++ 
Sbjct: 345 TYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKM 404

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSL------LDEMTKEGI---RPNVVTYNSII 551
           ++   K   V+Y+ LI ++C  G +   V+        +EM   G    + NVV++   +
Sbjct: 405 EKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCL 464

Query: 552 DAFGR 556
             FG+
Sbjct: 465 CGFGK 469



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/421 (20%), Positives = 159/421 (37%), Gaps = 31/421 (7%)

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI----TFNSLLAVCSRGGLWEAARNLFNE 324
           ++DA       F     I     R  + PD +    +F     +C +  LW A R +   
Sbjct: 110 ILDAIRNCDDGFGEKTHIVLRQFRQKLNPDLVVEILSFLKSPELCVKFFLW-AGRQI--- 165

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
               G D     Y  LLD   +G+   +  E + E+   +        + +I    + G 
Sbjct: 166 ----GYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGL 221

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
            + AL     +K  G    R++YN ++ ++ +  + + A LV +EM   G+  D  T   
Sbjct: 222 WNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGF 281

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
                 K GK+ E   + E  K D V PN + Y+ +I    +   ++EAM      +   
Sbjct: 282 FAQALCKVGKWREALSLIE--KEDFV-PNTILYNKMISGLCEASFFEEAMDFLNRMRSTS 338

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT- 563
              +V  Y  L+        +     +L  M  EG  P+   +NS++ A+ +S       
Sbjct: 339 CIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAY 398

Query: 564 -----VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
                ++  E   G    +  + ++CS  +        T     K + ++++      K 
Sbjct: 399 KLLKKMEKCECKPGYVVYNILIGSICSGGE---LPGPVTFELAEKAYNEMLSAGTVLNKV 455

Query: 619 ENRCRQEILCILGVFQKMHKL-------KIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                   LC  G F+K +K+          P+  T+S ++      +  E+A  L +E+
Sbjct: 456 NVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEM 515

Query: 672 R 672
           +
Sbjct: 516 K 516



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 22/164 (13%)

Query: 180 AFAVKREERKNDQGKLASAMISIL-GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
           A+A+  E ++    K  S+   ++ G   +  L+  + E     G   T+  +  LI  +
Sbjct: 839 AYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNF 898

Query: 239 GRSGYCQ-------EAISVFNSMK-RYNLKPNLV---TYNAVIDACGKGGVDFKHVVEIF 287
            ++G  +       E IS   SM  + NL  +L+   +Y + ID          H  E+F
Sbjct: 899 VKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKID----------HAFELF 948

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
            DM+R+GV PD  TF  LL    R   WE A  L + +    I+
Sbjct: 949 YDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDIN 992


>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 181/375 (48%), Gaps = 40/375 (10%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG-VDFKHVVEIF 287
           Y +  L+ A+ RS    +A  V+  ++R   K ++  YN ++DA  K   VD   V  +F
Sbjct: 226 YTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVD--QVYMVF 283

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            DM R   +PD  T+  ++ +  + G  + +  LF EM  +G   ++  YNT++ A+   
Sbjct: 284 KDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANN 343

Query: 348 AQMD--------LAFEIMAEMPAKNISPNVV----------------------------- 370
             +D        +  E+  +   K+I   +V                             
Sbjct: 344 RMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRD 403

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
            Y +M++    AG+  +AL++ S++    I  D V YNTVLS   KL +  +   + ++M
Sbjct: 404 AYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKM 463

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
           +  G   D  +YN L+  +G+ G+ +E  ++FE+++     P+++++++LI+   K G  
Sbjct: 464 KQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDI 523

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            EA   F+E ++ GL  DVV YS LI+   K   VE A  L DEM  EG  PN+VTYN +
Sbjct: 524 DEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNIL 583

Query: 551 IDAFGRSATTECTVD 565
           +D   RS  T   VD
Sbjct: 584 LDCLERSGRTAEAVD 598



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 209/413 (50%), Gaps = 20/413 (4%)

Query: 144 DILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISIL 203
           D++KK++ ++     Y  LL+        +KA + +   ++R   K D     + ++  L
Sbjct: 214 DLVKKWDLQM-NCYTYKCLLQAHLRSNNSNKAFEVYV-ELRRRGYKLDIFAY-NMLLDAL 270

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
            +  KVD    +F+    +      Y ++ +I   G+ G   E++++F  M      PNL
Sbjct: 271 AKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNL 330

Query: 264 VTYNAVIDACGKGG-VD------FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
           + YN +I A      VD       K VVE+ +  +   +      +  L+   S+ G   
Sbjct: 331 IAYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSI------YAYLVRTLSKLGHAS 384

Query: 317 AARNLFNEM--VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            A  LF  M   H   D+D   Y ++L+++C   +   A ++++++  K IS + V Y+T
Sbjct: 385 EAHRLFCNMWSFHDEGDRD--AYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNT 442

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++    K  +  D  +++ +MK  G   D  SYN ++S + + GR EEA+ + +E+E+S 
Sbjct: 443 VLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSS 502

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
            + D +++N+L+   GK G  DE    F++M+ + +SP+++TYSTLI+ + K    + A 
Sbjct: 503 CKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMAC 562

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           ++F E    G   ++V Y+ L+D L ++G    AV L  ++ ++G+ P+ +TY
Sbjct: 563 RLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY 615



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 181/362 (50%), Gaps = 11/362 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL  L    +  +    F   +KR+  + D+    + MI + G++GK D +  +F+ 
Sbjct: 263 YNMLLDALAKDNKVDQVYMVFK-DMKRKHCEPDEYTY-TIMIRMTGKIGKADESLTLFQE 320

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM--KRYNLKPNLVTYNAVIDACGKG 276
              +GY   + A++ +I A   +    + I +F+ M  +  N   N   Y  ++    K 
Sbjct: 321 MTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKL 380

Query: 277 GVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G    H  E   +F +M     + DR  + S+L      G    A +L +++  + I  D
Sbjct: 381 G----HASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTD 436

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
              YNT+L A+ K  +     ++  +M     SP++ +Y+ +I  + +AGR+++A+ +F 
Sbjct: 437 TVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFE 496

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           E++      D +S+N++++   K G  +EA +  KEM   G+  D VTY+ L+  +GK  
Sbjct: 497 ELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTD 556

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           K +   R+F++M A+  SPN++TY+ L+D   + G   EA+ ++ + KQ GL  D + Y+
Sbjct: 557 KVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYA 616

Query: 514 AL 515
            L
Sbjct: 617 VL 618



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 205/466 (43%), Gaps = 30/466 (6%)

Query: 249 SVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
           ++ + M+R  ++ ++ T N +I   G GG D   V   FD + +  +Q +  T+  LL  
Sbjct: 179 AILDDMERCGVRGSISTINILIGIFG-GGAD---VERCFDLVKKWDLQMNCYTYKCLLQA 234

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
             R      A  ++ E+  RG   DIF YN LLDA+ K  ++D  + +  +M  K+  P+
Sbjct: 235 HLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPD 294

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
             TY+ MI    K G+ D++L +F EM   G   + ++YNT++   A     ++ + +  
Sbjct: 295 EYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFS 354

Query: 429 EM--ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
           +M  E S    +   Y  L+    K G   E  R+F  M +     +   Y ++++    
Sbjct: 355 KMVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCD 414

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G   EA+ +  +  +  +  D V+Y+ ++ AL K         L ++M ++G  P++ +
Sbjct: 415 AGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFS 474

Query: 547 YNSIIDAFGRSATTECTV---DDVERDLGKQK-ESANLDAMCSQDDKDVQEAGRTDNQI- 601
           YN +I +FGR+   E  V   +++E    K    S N    C   + D+ EA     ++ 
Sbjct: 475 YNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMR 534

Query: 602 -------IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
                  +  +  L+       K E  CR        +F +M      PN+VT++ +L+ 
Sbjct: 535 EEGLSPDVVTYSTLIECFGKTDKVEMACR--------LFDEMLAEGCSPNIVTYNILLDC 586

Query: 655 CSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWVQ 696
             R     +A  L  +L+      D+  Y V   L  G    + V+
Sbjct: 587 LERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGSHQKVRVR 632


>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
 gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
          Length = 439

 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 215/431 (49%), Gaps = 25/431 (5%)

Query: 117 MSTRHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAI 176
           M T H++  E AL         +++   +L++FE    G   Y F         EW+   
Sbjct: 1   MMTCHTLALETALDQTGIRISPEIA-EPVLRRFEN--AGMLAYRFF--------EWASKQ 49

Query: 177 QCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALIS 236
           + +  +V+             +MI  L ++ +  +  ++     N+   N V AF  ++ 
Sbjct: 50  RNYVHSVR----------AYHSMIESLAKIRQYQMVWDLVNAMRNKEILN-VEAFCIIMR 98

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQ 296
            Y R+   +EA+  FN M++YN+KPN+  +N ++ A  K   + +   EIFD+M ++   
Sbjct: 99  KYARAQKVEEAVYTFNVMEKYNMKPNVAAFNGLLSALCKSK-NVRKAQEIFDNM-KDQFV 156

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           PD  T++ L+    R      AR ++ EM+  G   D  TY+ ++D +CK  ++D A EI
Sbjct: 157 PDSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEI 216

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           + EM   N  P+   YS ++  Y    R++DA++ F EM+  G+  D  +YN ++S + K
Sbjct: 217 VKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCK 276

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
             + +    V K+M+  G+  ++ T N ++     +G+ DE  ++F +M   C  P++ +
Sbjct: 277 ANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIKVC-EPDVDS 335

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y+ +I ++        A++I++  K+      +  +S LI+ LC+ G    A  LL+EM 
Sbjct: 336 YTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMI 395

Query: 537 KEGIRPNVVTY 547
           ++GIRP+  T+
Sbjct: 396 EKGIRPSGATF 406



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 170/351 (48%), Gaps = 11/351 (3%)

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            R     +  Y+++++++ K  Q  + ++++  M  K I  NV  +  ++  YA+A +++
Sbjct: 49  QRNYVHSVRAYHSMIESLAKIRQYQMVWDLVNAMRNKEIL-NVEAFCIIMRKYARAQKVE 107

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           +A+  F+ M+   +  +  ++N +LS   K     +A  +   M+   +  D+ TY+ L+
Sbjct: 108 EAVYTFNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQFV-PDSKTYSILI 166

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G+G+     + R ++ +M      P+ +TYS ++DV  K G   EA++I +E      K
Sbjct: 167 EGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCK 226

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
               +YS L+        +E AVS   EM + G+  +V  YN++I AF ++   +  V  
Sbjct: 227 PSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMK-NVYR 285

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV------AEKAGQGKKEN 620
           V +D+  +  + N    C+     +   G TD +  K+F +++       +      K  
Sbjct: 286 VLKDMDLKGVNPN-SRTCNIIINSLIGRGETD-EAFKIFRRMIKVCEPDVDSYTMIIKMF 343

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             R+E+   L +++ M K +  P++ TFS ++N   +  +   A +LLEE+
Sbjct: 344 CGRKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEM 394



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 90/400 (22%), Positives = 163/400 (40%), Gaps = 52/400 (13%)

Query: 121 HSVVAEEALHHVTAFARDDVSLGDILKKFEFK-LCGADDYTFLLRELGNRGEWSKAIQCF 179
           HSV A  ++    A  R    + D++     K +   + +  ++R+     +  +A+  F
Sbjct: 54  HSVRAYHSMIESLAKIRQYQMVWDLVNAMRNKEILNVEAFCIIMRKYARAQKVEEAVYTF 113

Query: 180 AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYG 239
               K   + N      + ++S L +   V  A+ IF+  + + +      +S LI  +G
Sbjct: 114 NVMEKYNMKPNVAA--FNGLLSALCKSKNVRKAQEIFDN-MKDQFVPDSKTYSILIEGWG 170

Query: 240 RSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPD 298
           R+    +A  ++  M      P+ VTY+ ++D  C  G VD    VEI  +M  N  +P 
Sbjct: 171 RAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVD--EAVEIVKEMDYNNCKPS 228

Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
              ++ L+         E A + F EM   G+  D+  YN L+ A CK  +M   + ++ 
Sbjct: 229 SFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLK 288

Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM-KFLGIGLDRVSYNTVLSIYA-- 415
           +M  K ++PN  T + +I+     G  D+A  +F  M K     +D  SY  ++ ++   
Sbjct: 289 DMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIKVCEPDVD--SYTMIIKMFCGR 346

Query: 416 ---------------------------------KLGRFEEALLVCKEMESSGIRKDAVTY 442
                                            ++G   +A ++ +EM   GIR    T+
Sbjct: 347 KELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATF 406

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
             L     K+G+ D ++ + E+M       NLL    L D
Sbjct: 407 GRLRHLLIKEGRKDVLKFLQEKM-------NLLVKEPLCD 439


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 223/482 (46%), Gaps = 42/482 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+I       K   A  +    +  G+   VY F+ L+  + +SG   +A+ +F  MKR
Sbjct: 98  SALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKR 157

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVV---EIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
             L P+ V+YN VI+   KG    K +V   E+F +M     +P+ +TF++L+    + G
Sbjct: 158 NCLIPDCVSYNTVINGLCKG----KRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNG 213

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             E    L  EM   G++ D+F Y+ L+   C    ++   E+  EM  KN++PNVVTYS
Sbjct: 214 DVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYS 273

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +++   K  +  +A  M   M    +  D V+Y  +    +K GR  +A+ V   M   
Sbjct: 274 CLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKR 333

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G   + VTYNA++ G  K+G+ D+   + E M      P+++TYSTL+      G   EA
Sbjct: 334 GEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEA 393

Query: 494 MQIFREF--KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           + +      K+  +K DV  ++ +I  LCK   +  A  +   M + G   N+VTYN +I
Sbjct: 394 VDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILI 453

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
           D +  +              GK  ++  L        KD  ++G + N     +  L+  
Sbjct: 454 DGYLSA--------------GKLTKALEL-------WKDAVDSGISPNA--ATYTVLI-- 488

Query: 612 KAGQGKKENRCRQEILCIL-GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                     C+ ++L I  G+F K      +P V  ++ ++ +  R +S E A  L +E
Sbjct: 489 -------NGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQE 541

Query: 671 LR 672
           +R
Sbjct: 542 MR 543



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 183/367 (49%), Gaps = 3/367 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+I    + G V+    + E     G    V+ +SALIS +   G  +    +FN M R
Sbjct: 203 SALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLR 262

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            N+ PN+VTY+ +++A  K    +K   ++ D M    V+PD + +  L    S+ G   
Sbjct: 263 KNVTPNVVTYSCLMNALCKKQ-KWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRAS 321

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  + + MV RG + +  TYN +++ +CK  ++D A  I+  M  K   P+VVTYST++
Sbjct: 322 DAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLV 381

Query: 377 DGYAKAGRLDDALNMFSEM--KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
            G    G++D+A+++ + +  K   I  D  ++N V+    K  R   A  V   M   G
Sbjct: 382 KGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERG 441

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              + VTYN L+ GY   GK  +   +++      +SPN  TY+ LI+   K  +   A 
Sbjct: 442 FPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAK 501

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +F + + +G +  V  Y+ L+ +LC+   VE A +L  EM      P+VV++N IID  
Sbjct: 502 GLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGT 561

Query: 555 GRSATTE 561
            ++   E
Sbjct: 562 LKAGDVE 568



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 177/350 (50%), Gaps = 10/350 (2%)

Query: 222 EGYGNTVYAFSA---LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA---CGK 275
           + Y N++ ++S+   LI    ++ +    ISV + M   ++ P   + +A+I++     K
Sbjct: 50  QDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQK 109

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
               F     +   +++ G   +   FN LL    + G    A +LF  M    +  D  
Sbjct: 110 PSFAFG----VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCV 165

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           +YNT+++ +CKG ++  A E+  EM      PN VT+S +IDG+ K G +++   +  EM
Sbjct: 166 SYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEM 225

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           + +G+  D   Y+ ++S +   G  E    +  EM    +  + VTY+ L+    K+ K+
Sbjct: 226 EKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKW 285

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            E  +M + M    V P+++ Y+ L D  SK G   +A+++     + G + + V Y+A+
Sbjct: 286 KEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAI 345

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           I+ LCK G V+ A+ +L+ M K+G +P+VVTY++++         +  VD
Sbjct: 346 INGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVD 395



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 163/323 (50%), Gaps = 7/323 (2%)

Query: 246 EAISVFN-SMKRY-NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
           E++S F+ +++ Y N  P+  + N +ID   K    + HV+ +   M    V P   + +
Sbjct: 40  ESLSHFHHTLQDYPNSIPSYSSCNTLIDNLRKAK-HYDHVISVHSKMASVSVFPCFTSLS 98

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
           +L+           A  +   ++ RG   +++ +N LL   C+      A ++   M   
Sbjct: 99  ALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRN 158

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
            + P+ V+Y+T+I+G  K  RL +A  +F EMK      + V+++ ++  + K G  EE 
Sbjct: 159 CLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEG 218

Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
             + +EME  G+  D   Y+AL+ G+  +G  +  + +F +M    V+PN++TYS L++ 
Sbjct: 219 FGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNA 278

Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             K   +KEA Q+        ++ DVV Y+ L D L KNG    A+ +LD M K G  PN
Sbjct: 279 LCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPN 338

Query: 544 VVTYNSIIDAFGRSATTECTVDD 566
            VTYN+II+   +    E  VDD
Sbjct: 339 NVTYNAIINGLCK----EGRVDD 357



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 178/346 (51%), Gaps = 7/346 (2%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V A++ L     ++G   +AI V + M +   +PN VTYNA+I+  C +G VD    + I
Sbjct: 304 VVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVD--DALGI 361

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRG--IDQDIFTYNTLLDA 343
            + M + G +PD +T+++L+  +C  G + EA  +L N ++ +   I  D+F +N ++  
Sbjct: 362 LETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAV-DLLNLLMSKEFHIKPDVFAFNLVIQE 420

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +CK  ++  A  +   M  +    N+VTY+ +IDGY  AG+L  AL ++ +    GI  +
Sbjct: 421 LCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPN 480

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +Y  +++   K+     A  +  +  +SG R     YN L+    ++   ++ R +F+
Sbjct: 481 AATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQ 540

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +M+     P++++++ +ID   K G  + A ++  E     L  D + +S LI+   K G
Sbjct: 541 EMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLG 600

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
            ++ A SL + M   G  P+ V ++S++  +     TE  V  +++
Sbjct: 601 QLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQ 646



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/385 (23%), Positives = 178/385 (46%), Gaps = 7/385 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L  + +W +A Q        + R +      + +   L + G+   A  + + 
Sbjct: 272 YSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVA--YTVLADGLSKNGRASDAIKVLDL 329

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            +  G       ++A+I+   + G   +A+ +  +M +   KP++VTY+ ++   CG G 
Sbjct: 330 MVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGK 389

Query: 278 VDFKHVVEIFDDMLRNG--VQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           +D    V++ + ++     ++PD   FN ++    +      A+ ++  MV RG   +I 
Sbjct: 390 ID--EAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIV 447

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYN L+D      ++  A E+  +     ISPN  TY+ +I+G  K   L  A  +F++ 
Sbjct: 448 TYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKK 507

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           +  G       YNT+++   +    E+A  + +EM ++    D V++N ++ G  K G  
Sbjct: 508 RASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDV 567

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
           +  + +  +M    + P+ +T+S LI+ + K G   EA  ++      G   D VL+ +L
Sbjct: 568 ESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSL 627

Query: 516 IDALCKNGLVESAVSLLDEMTKEGI 540
           +      G  E  VS+L +M  + +
Sbjct: 628 LKGYSLKGKTEKVVSMLQQMADKDV 652



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/377 (23%), Positives = 173/377 (45%), Gaps = 35/377 (9%)

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           P   + N+L+    +   ++   ++ ++M    +     + + L+++     +   AF +
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           +  +  +    NV  ++ ++ G+ ++G    A+++F  MK   +  D VSYNTV++   K
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
             R  EA  + KEM+    + ++VT++AL+ G+ K G  +E   + E+M+   +  ++  
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           YS LI  +   G  +   ++F E  +  +  +VV YS L++ALCK    + A  +LD MT
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMT 296

Query: 537 KEGIRPNVVTYNSIIDAFGRS--ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEA 594
              +RP+VV Y  + D   ++  A+    V D+    G++  +   +A+ +   K+    
Sbjct: 297 GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKE---- 352

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
           GR D+                              LG+ + M K   KP+VVT+S ++  
Sbjct: 353 GRVDDA-----------------------------LGILETMAKKGKKPDVVTYSTLVKG 383

Query: 655 CSRCNSFEDASMLLEEL 671
                  ++A  LL  L
Sbjct: 384 LCGVGKIDEAVDLLNLL 400


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 226/467 (48%), Gaps = 31/467 (6%)

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
           +++G    ++ ++ LI    + G   +A  + + M    + P++ TYNA+ID   K G  
Sbjct: 276 VHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSG-R 334

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            K  + I   M +NG  PD  T+NSL+  +C  GG  + A  L N  + RG    + T+ 
Sbjct: 335 MKDALGIKALMEQNGCNPDDWTYNSLIYGLC--GGKLDEAEELLNGAIARGFTPTVITFT 392

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L++  CK  ++D A  + + M + N   ++  Y  +I+   K  RL +A    +EM   
Sbjct: 393 NLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFAN 452

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  + V+Y +++  Y K+G    AL V K ME  G   +A TY +L+ G  +  K  + 
Sbjct: 453 GLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKA 512

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +  +M+ D ++P ++TY+TLI    K   +  A ++F   +Q GL  D   Y+ L DA
Sbjct: 513 MALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDA 572

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE-- 576
           LCK+G  E A S L    ++G+    VTY S++D F ++  T+     +E+ + +  +  
Sbjct: 573 LCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKAD 629

Query: 577 ----SANLDAMCSQDDKDVQEAGRTDNQI--------IKVFGQLVAEKAGQGKKENRCRQ 624
               S  L A+C Q  K + EA    +Q+        I  +  +++E   +GK ++    
Sbjct: 630 LYTYSVLLQALCKQ--KKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHA--- 684

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                  +F +M     KP+  T++  +++  +    E+A  L+ E+
Sbjct: 685 -----KSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEM 726



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 175/393 (44%), Gaps = 30/393 (7%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           +G    V  ++ LI    +      A  +F  M++  L P+   YN + DA  K G    
Sbjct: 522 DGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG---- 577

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
              E +  ++R GV   ++T+ SL+   S+ G  + A  L  +MV+ G   D++TY+ LL
Sbjct: 578 RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLL 637

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
            A+CK  +++ A  I+ +M    +  N+V Y+ +I    K G+ D A ++F+EM   G  
Sbjct: 638 QALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHK 697

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
               +Y   +S Y K+GR EEA  +  EME  G+  D VTYN  + G G  G  D     
Sbjct: 698 PSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFST 757

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKE----------------AMQIFREFKQAGL 505
            ++M      PN  TY  L+  + K  L                     Q+     + GL
Sbjct: 758 LKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGL 817

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA------FGRSAT 559
              VV YS++I   CK   +E A  LLD M  + I PN   Y  +I        FG++ +
Sbjct: 818 NPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVS 877

Query: 560 TECTVDDVERDLGKQKESAN--LDAMCSQDDKD 590
                D +E     Q ES +  +  +C + D D
Sbjct: 878 F--VTDMIEFGFQPQLESYHYLIVGLCDEGDYD 908



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 115/491 (23%), Positives = 210/491 (42%), Gaps = 75/491 (15%)

Query: 233 ALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT---YNAVIDACGKGGVDFKHVVEIFDD 289
           ++IS  G +   +EA+    +++R   K  +++   YN  + +  +  +  +++ +++  
Sbjct: 111 SMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMT-EYMGKLYSH 169

Query: 290 MLRNGVQPDRITFNSL-LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +++ G+ PD +T+N++ +A C +G L  A R  F  +   G+  D +T N LL   C+ +
Sbjct: 170 LVQEGLLPDTVTYNTMIMAYCKKGSLAIAHR-YFCLLRESGMQMDTYTCNALLLGYCRTS 228

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            +  A  ++  MP      N  +Y+ +I G  +A  + +AL +   M   G  L+  +Y 
Sbjct: 229 DLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYT 288

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ---------------- 452
            ++    K GR  +A  +  EM   G+     TYNA++ GY K                 
Sbjct: 289 LLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQN 348

Query: 453 ------------------GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
                             GK DE   +     A   +P ++T++ LI+ Y K     +A+
Sbjct: 349 GCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDAL 408

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++      +  K D+  Y  LI+ L K   ++ A   L+EM   G+ PNVVTY SIID +
Sbjct: 409 RVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGY 468

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
                  C V  V          A L+     + +       T   +I  +G +      
Sbjct: 469 -------CKVGMV---------GAALEVFKLMEHEGCHPNAWTYGSLI--YGLI------ 504

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR-- 672
           Q KK ++        + +  KM +  I P V+T++ ++    + + F++A  L E +   
Sbjct: 505 QDKKLHK-------AMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQN 557

Query: 673 --LFDNQVYGV 681
               D Q Y V
Sbjct: 558 GLTPDEQAYNV 568



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 150/358 (41%), Gaps = 20/358 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++++    + G  D A  + E  +NEG    +Y +S L+ A  +     EA+S+ + M  
Sbjct: 599 TSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTV 658

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +K N+V Y  +I    K G    H   +F++M+ +G +P   T+   ++   + G  E
Sbjct: 659 SGVKCNIVAYTIIISEMIKEG-KHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIE 717

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +L  EM   G+  D+ TYN  ++       +D AF  +  M   +  PN  TY  ++
Sbjct: 718 EAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLL 777

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             + K   ++      S M       + +  N V  +  +             M   G+ 
Sbjct: 778 KHFLKMSLINAHYVDTSGM------WNWIELNMVWQLLER-------------MMKHGLN 818

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
              VTY++++ G+ K  + +E   + + M    +SPN   Y+ LI       L+ +A+  
Sbjct: 819 PTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSF 878

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             +  + G +  +  Y  LI  LC  G  + A SL  ++       N V +  + D  
Sbjct: 879 VTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGL 936



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/175 (20%), Positives = 82/175 (46%), Gaps = 1/175 (0%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           ++++   + E  +  G   TV  +S++I+ + ++   +EA  + + M   ++ PN   Y 
Sbjct: 801 ELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYT 860

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            +I  C    + F   V    DM+  G QP   +++ L+      G ++ A++LF +++ 
Sbjct: 861 MLIKCCCDIKL-FGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLG 919

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
              + +   +  L D + K   +D   +++A M  ++   +  +YS + D   +A
Sbjct: 920 MDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSIREA 974


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 235/500 (47%), Gaps = 40/500 (8%)

Query: 190 NDQGKLASAMISIL----GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
           +D G  + A++ +L     + G+V  A  +     + G   ++   +AL+    R+    
Sbjct: 167 SDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMA 226

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
               V   M    + P++ TY+ +I+A  K   +F    ++  +M   G   + +T+N L
Sbjct: 227 LLWKVREFMVGAGISPDVYTYSTLIEAYCKVR-EFDTAKKVLVEMRERGCGLNTVTYNVL 285

Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
           +A   R G  E A     +M   G+  D FTY  L++ +CK  + + A  ++ EM    +
Sbjct: 286 IAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAEL 345

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            PNVV Y+ +IDG+ + G  D+A  M  EM   G+  ++++Y+ ++    K+G+ + A L
Sbjct: 346 KPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASL 405

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + K+M     R D +TYN ++ G+ +     +  R+  +M+   +SPN+ TYS +I    
Sbjct: 406 LLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLC 465

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           + G  ++A  +  E    GLK +  +Y+ LI   C+ G V  A  + D+MTK  + P++ 
Sbjct: 466 QSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLY 525

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
            YNS+I  FG S             +G+ +ES    A        +QE G   N+    +
Sbjct: 526 CYNSLI--FGLS------------KVGRVEESTKYFA-------QMQERGLLPNEF--TY 562

Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
             L+      G  E+  +        + Q+M    +KPN V +  +L +  + +  E  S
Sbjct: 563 SGLIHGYLKNGDLESAEQ--------LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 614

Query: 666 ----MLLEELRLFDNQVYGV 681
                +L++  + DN++YG+
Sbjct: 615 STFKSMLDQGVMLDNRIYGI 634



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 215/497 (43%), Gaps = 77/497 (15%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY-NAVIDACGKGGVDFKHVVEI 286
           V  ++ LI  + R G   EA  +   M    ++PN +TY N V   C  G +D   +  +
Sbjct: 349 VVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASL--L 406

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M+R+  +PD IT+N ++    R    + A  L +EM + GI  +++TY+ ++  +C+
Sbjct: 407 LKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 466

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             + + A +++ EM  K + PN   Y+ +I GY + G +  A  +F +M  + +  D   
Sbjct: 467 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 526

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN+++   +K+GR EE+     +M+  G+  +  TY+ L+ GY K G  +   ++ ++M 
Sbjct: 527 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 586

Query: 467 ADCVSPNLLTYSTLIDVY-----------------------------------SKGGLYK 491
              + PN + Y  L++ Y                                   S  G  +
Sbjct: 587 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 646

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            A ++    ++ G   DV +YS+LI  LCK    E A  +LDEM+K+G+ PN+V YN++I
Sbjct: 647 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 706

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
           D   +S            D+   +   N           +   G   N +   +  L+  
Sbjct: 707 DGLCKSG-----------DISYARNVFN----------SILAKGLVPNCV--TYTSLIDG 743

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               G   N           ++ +M    I P+   +S +   CS     E A  L+EE+
Sbjct: 744 SCKVGDISNA--------FYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 795

Query: 672 RL--------FDNQVYG 680
            L        F+N V G
Sbjct: 796 FLRGHASISSFNNLVDG 812



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 175/400 (43%), Gaps = 4/400 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ ++  L   GE  KA         +  + N    + + +IS   R G V LA  IF+ 
Sbjct: 457 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPN--AFVYAPLISGYCREGNVSLACEIFDK 514

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                    +Y +++LI    + G  +E+   F  M+   L PN  TY+ +I    K G 
Sbjct: 515 MTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG- 573

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           D +   ++   ML  G++P+ + +  LL    +    E   + F  M+ +G+  D   Y 
Sbjct: 574 DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYG 633

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+  +     M+ AF +++ +      P+V  YS++I G  K    + A  +  EM   
Sbjct: 634 ILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK 693

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  + V YN ++    K G    A  V   + + G+  + VTY +L+ G  K G     
Sbjct: 694 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 753

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             ++ +M A  ++P+   YS L    S  G  ++AM +  E    G  A +  ++ L+D 
Sbjct: 754 FYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDG 812

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            CK G ++  + LL  +   G+ PN +T  +II     + 
Sbjct: 813 FCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAG 852



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 181/435 (41%), Gaps = 90/435 (20%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I  L ++G+V+ +   F      G     + +S LI  Y ++G  + A  +   M  
Sbjct: 528 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 587

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML------------------------- 291
             LKPN V Y  ++++  K   D + V   F  ML                         
Sbjct: 588 TGLKPNDVIYIDLLESYFKSD-DIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 646

Query: 292 ----------RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
                     +NG  PD   ++SL++   +    E A  + +EM  +G+D +I  YN L+
Sbjct: 647 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 706

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           D +CK   +  A  +   + AK + PN VTY+++IDG  K G + +A  +++EM   GI 
Sbjct: 707 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGIT 766

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D   Y+ + +  +  G  E+A+ + +EM   G      ++N L+ G+ K+GK  E  ++
Sbjct: 767 PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKL 825

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ------------------- 502
              +    + PN LT   +I   S+ G   E   IF E +Q                   
Sbjct: 826 LHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMIN 885

Query: 503 ------------------------AGLKADVVL----------YSALIDALCKNGLVESA 528
                                   A +  DV++          Y A++D LC+ G +  A
Sbjct: 886 QGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEA 945

Query: 529 VSLLDEMTKEGIRPN 543
           ++LL EM K GI P+
Sbjct: 946 LNLLKEMDKRGICPS 960



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 152/333 (45%), Gaps = 22/333 (6%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L + G    A +  +  +++     D   + S++IS L +    + A  I + 
Sbjct: 632 YGILIHNLSSSGNMEAAFRVLS-GIEKNGSVPDV-HVYSSLISGLCKTADREKAFGILDE 689

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G    +  ++ALI    +SG    A +VFNS+    L PN VTY ++ID   K G 
Sbjct: 690 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG- 748

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           D  +   ++++ML  G+ PD   ++ L   CS  G  E A  L  EM  RG    I ++N
Sbjct: 749 DISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFN 807

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK-- 396
            L+D  CK  +M    +++  +  + + PN +T   +I G ++AG+L +   +F E++  
Sbjct: 808 NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 867

Query: 397 --------FLGIGLDRVSYNTV--------LSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
                   F  + +D ++   +        +  + K G  ++AL++   + +        
Sbjct: 868 TSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCS 927

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           +Y A++    ++GK  E   + ++M    + P+
Sbjct: 928 SYLAIVDNLCRKGKLSEALNLLKEMDKRGICPS 960


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 183/359 (50%), Gaps = 1/359 (0%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I +LG+ G+ + A  I +   +EG    V   + LI     +G   +A  VF  MK  + 
Sbjct: 258 IRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQ 317

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           KP+ VTY  ++D CG  G D + V+EI++ M  +G   + + + +++    + G  + A 
Sbjct: 318 KPDRVTYITLLDKCGDNG-DSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEAS 376

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           ++F++M  +GI+   ++YN+L+    K  +++ A E+   M     +PN  TY   I+ Y
Sbjct: 377 DVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYY 436

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K+G    A+  +  MK  GI  D V+ N VL   AK GR   A  V  E++S G+  D 
Sbjct: 437 GKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDN 496

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           +TY  ++    K    DE  ++F +M      P++L  ++LID   K G   EA +IF E
Sbjct: 497 ITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHE 556

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            K+  L      Y+ L+  L + G V+  + LL+EM      PN++TYN+++D   ++ 
Sbjct: 557 LKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNG 615



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 174/342 (50%), Gaps = 3/342 (0%)

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD 279
           + G    VY+++  I   G++G  +EA  +   M+    KP++VT   +I   C  G V 
Sbjct: 244 DHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVS 303

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
                ++F  M  +  +PDR+T+ +LL  C   G   +   ++N M   G + ++  Y  
Sbjct: 304 --DAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTA 361

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           ++DA+C+  ++D A ++  +M  K I P   +Y+++I G+ KA RL+ AL +F+ M   G
Sbjct: 362 VVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHG 421

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
              +  +Y   ++ Y K G   +A+   + M+S GI  D V  NA+L    K G+    +
Sbjct: 422 PTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAK 481

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           R+F ++K+  V P+ +TY+ +I   SK     EAM++F E  +     DV+  ++LID L
Sbjct: 482 RVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTL 541

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            K G    A  +  E+ +  + P   TYN+++   GR    +
Sbjct: 542 YKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVK 583



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 197/413 (47%), Gaps = 13/413 (3%)

Query: 156  ADDYTFL---LRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLG---KV 209
            A DYT L   L      G  ++A+      + +   K D+    S M  IL R G    +
Sbjct: 667  APDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSI 726

Query: 210  DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
            + A+NI   AL+    +  +  S LI    +S    EA  +    +   +     +YNA+
Sbjct: 727  EFAENI---ALSRILLDDFF-LSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNAL 782

Query: 270  IDACGKGGVDFKHVVE-IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
            I  CG    +   V E +F +M R G  PD  T+N +L    +    E    +  EM  +
Sbjct: 783  I--CGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCK 840

Query: 329  GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            G +    TYNT++  + K   +  A ++  ++ ++  SP   TY  ++DG  K G+++DA
Sbjct: 841  GYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDA 900

Query: 389  LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             ++F EM   G   +R  YN +L+ Y   G  E+   + + M   GI  D  +Y  L+G 
Sbjct: 901  EDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGA 960

Query: 449  YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
                G+ ++    F Q+    + P+L+TY+ LI    + G  +EA+ +F + +++G+  +
Sbjct: 961  LCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPN 1020

Query: 509  VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +  Y++LI  L K G    A  + +E+ K G +PNV TYN++I  +  S +T+
Sbjct: 1021 LYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTD 1073



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 143/623 (22%), Positives = 266/623 (42%), Gaps = 93/623 (14%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL + G+ G+    I+   +   + +  ND     +A++  L ++G+VD A ++F+ 
Sbjct: 324 YITLLDKCGDNGDSRSVIE--IWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQ 381

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G     Y++++LIS + ++     A+ +FN M  +   PN  TY   I+  GK G 
Sbjct: 382 MKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGE 441

Query: 279 DFKHVVE----------------------------------IFDDMLRNGVQPDRITFNS 304
             K +                                    +F ++   GV PD IT+  
Sbjct: 442 SLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTM 501

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           ++  CS+    + A  +F+EM+      D+   N+L+D + K  + + A++I  E+   N
Sbjct: 502 MIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMN 561

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           + P   TY+T++ G  + G++ + +++  EM       + ++YNTVL    K G    AL
Sbjct: 562 LDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYAL 621

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +   M   G   D  +YN  L G  K+ +  E  R+F QMK   ++P+  T  T++  +
Sbjct: 622 GMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMK-KVLAPDYTTLCTILPSF 680

Query: 485 SKGGLYKEAMQIFREF-KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
            K GL  EA+   +E+  Q G KAD   + +L++ + K   +E ++   +         N
Sbjct: 681 VKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAE---------N 731

Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
           +     ++D F  S           R L K K++  L+A                ++++K
Sbjct: 732 IALSRILLDDFFLSPLI--------RHLCKSKKA--LEA----------------HELVK 765

Query: 604 VFGQL-VAEKAGQGKKENRCRQEILCIL----------GVFQKMHKLKIKPNVVTFSAIL 652
            F  L V+ K G           ++C L          G+F +M +L   P+  T++ IL
Sbjct: 766 KFESLGVSLKTGS-------YNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLIL 818

Query: 653 NACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSS 710
           +A  +    ED   + +E+     +   V +  ++    +  +  +A+ L+ ++     S
Sbjct: 819 DAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFS 878

Query: 711 TASAFYNALTDMLWHFGQKRGAQ 733
                Y  L D L   G+   A+
Sbjct: 879 PTPCTYGPLLDGLLKDGKIEDAE 901



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 205/443 (46%), Gaps = 33/443 (7%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y ++ LI    +SGY +EA+ V+  M    + P++ TY+ ++ A GK   D + VV +  
Sbjct: 183 YTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKR--DVETVVWLLR 240

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +M  +GV+P+  ++   + V  + G +E A  +  +M   G   D+ T   L+  +C   
Sbjct: 241 EMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAG 300

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++  A ++  +M A +  P+ VTY T++D     G     + +++ MK  G   + V+Y 
Sbjct: 301 RVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYT 360

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            V+    ++GR +EA  V  +M+  GI     +YN+L+ G+ K  + +    +F  M   
Sbjct: 361 AVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIH 420

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
             +PN  TY   I+ Y K G   +A++ +   K  G+  DVV  +A++ +L K+G +  A
Sbjct: 421 GPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMA 480

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
             +  E+   G+ P+ +TY  +I         +C       D   +  S  ++  C  D 
Sbjct: 481 KRVFHELKSIGVCPDNITYTMMI---------KCCSKASNADEAMKVFSEMIETRCVPDV 531

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
             V       N +I         KAG+G +  +          +F ++ ++ + P   T+
Sbjct: 532 LAV-------NSLIDTL-----YKAGRGNEAWK----------IFHELKEMNLDPTDCTY 569

Query: 649 SAILNACSRCNSFEDASMLLEEL 671
           + +L    R    ++   LLEE+
Sbjct: 570 NTLLAGLGREGKVKEVMHLLEEM 592



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 159/318 (50%), Gaps = 1/318 (0%)

Query: 230  AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            +++ALI           A  +F+ MKR    P+  TYN ++DA GK  +  + ++++  +
Sbjct: 778  SYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKS-MRIEDMLKVQKE 836

Query: 290  MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
            M   G +   +T+N++++   +  +   A +L+ +++  G      TY  LLD + K  +
Sbjct: 837  MHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGK 896

Query: 350  MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            ++ A ++  EM      PN   Y+ +++GY  AG  +    +F  M   GI  D  SY  
Sbjct: 897  IEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTV 956

Query: 410  VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
            ++      GR  ++L   +++   G+  D +TYN L+ G G+ G+ +E   +F  M+   
Sbjct: 957  LIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSG 1016

Query: 470  VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            ++PNL TY++LI    K G   EA +++ E  + G K +V  Y+ALI     +G  ++A 
Sbjct: 1017 IAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAF 1076

Query: 530  SLLDEMTKEGIRPNVVTY 547
            +   +M   G  PN  TY
Sbjct: 1077 ASYGQMIVGGCPPNSSTY 1094



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 154/311 (49%), Gaps = 1/311 (0%)

Query: 209  VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
            +D+A+ +F      G     + ++ ++ A G+S   ++ + V   M     +   VTYN 
Sbjct: 792  IDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNT 851

Query: 269  VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
            +I    K  + ++  ++++  ++  G  P   T+  LL    + G  E A +LF+EM+  
Sbjct: 852  IISGLVKSKMLYE-AMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDY 910

Query: 329  GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            G   +   YN LL+        +   E+   M  + I+P++ +Y+ +I     AGRL+D+
Sbjct: 911  GCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDS 970

Query: 389  LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
            L+ F ++  LG+  D ++YN ++    + GR EEA+ +  +ME SGI  +  TYN+L+  
Sbjct: 971  LSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILY 1030

Query: 449  YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             GK+GK  E  +M+E++  +   PN+ TY+ LI  YS  G    A   + +    G   +
Sbjct: 1031 LGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPN 1090

Query: 509  VVLYSALIDAL 519
               Y  L + L
Sbjct: 1091 SSTYMQLPNQL 1101



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 138/274 (50%), Gaps = 1/274 (0%)

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           + + ++FD M R  V+ +  TF ++       G   +A      M   GI  + +TYN L
Sbjct: 129 RDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGL 188

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +  + K      A E+   M    I P+V TYS ++  + K   ++  + +  EM+  G+
Sbjct: 189 IYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKR-DVETVVWLLREMEDHGV 247

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             +  SY   + +  + GRFEEA  + ++ME  G + D VT   L+      G+  + + 
Sbjct: 248 KPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKD 307

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F +MKA    P+ +TY TL+D     G  +  ++I+   K  G   +VV Y+A++DALC
Sbjct: 308 VFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALC 367

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           + G V+ A  + D+M ++GI P   +YNS+I  F
Sbjct: 368 QVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGF 401



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/548 (21%), Positives = 224/548 (40%), Gaps = 69/548 (12%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
            YT +++         +A++ F+  +  E R        +++I  L + G+ + A  IF  
Sbjct: 499  YTMMIKCCSKASNADEAMKVFSEMI--ETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHE 556

Query: 219  ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                    T   ++ L++  GR G  +E + +   M   +  PNL+TYN V+D   K G 
Sbjct: 557  LKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNG- 615

Query: 279  DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAAR------------------ 319
            +  + + +  +M   G  PD  ++N+ L  +     L EA R                  
Sbjct: 616  EVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYTTLCT 675

Query: 320  --------NLFNEMVHR--------GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
                     L NE +H         G   D  ++++L++ I K A M+ + E    +   
Sbjct: 676  ILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALS 735

Query: 364  NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
             I  +    S +I    K+ +  +A  +  + + LG+ L   SYN ++         + A
Sbjct: 736  RILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVA 795

Query: 424  LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
              +  EM+  G   D  TYN +L   GK  + +++ ++ ++M         +TY+T+I  
Sbjct: 796  EGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISG 855

Query: 484  YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
              K  +  EAM ++ +    G       Y  L+D L K+G +E A  L DEM   G +PN
Sbjct: 856  LVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPN 915

Query: 544  VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
               YN +++ +                    + + N + +C      V +    D   IK
Sbjct: 916  RAIYNILLNGY--------------------RLAGNTEKVCELFQNMVDQGINPD---IK 952

Query: 604  VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
             +  L+      G+  +         L  F+++ +L ++P+++T++ +++   R    E+
Sbjct: 953  SYTVLIGALCTAGRLNDS--------LSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEE 1004

Query: 664  ASMLLEEL 671
            A  L  ++
Sbjct: 1005 AVSLFNDM 1012



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 2/219 (0%)

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
           G   D+A ++   M  + +  NV T+ T+       G L  A      MK  GI L+  +
Sbjct: 126 GRVRDMA-QVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYT 184

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YN ++    K G   EA+ V K M + GI     TY+ L+  +GK+   + V  +  +M+
Sbjct: 185 YNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKR-DVETVVWLLREME 243

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V PN+ +Y+  I V  + G ++EA +I ++ +  G K DVV  + LI  LC  G V 
Sbjct: 244 DHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVS 303

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
            A  +  +M     +P+ VTY +++D  G +  +   ++
Sbjct: 304 DAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIE 342



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 132/317 (41%), Gaps = 27/317 (8%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           S N +L +    GR  +   V   M+   ++ +  T+  +    G +G           M
Sbjct: 114 SCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMM 173

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           K   +  N  TY+ LI    K G  +EAM++++     G+   V  YS L+ A  K   V
Sbjct: 174 KEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRD-V 232

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKESAN---- 579
           E+ V LL EM   G++PNV +Y   I   G++   E     +++  D G + +       
Sbjct: 233 ETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVL 292

Query: 580 ----LDAMCSQDDKDV-QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
                DA    D KDV  +   +D +  +V    + +K G              ++ ++ 
Sbjct: 293 IQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRS-------VIEIWN 345

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL--FDNQVY---GVAHGLLMGY 689
            M       NVV ++A+++A  +    ++AS + ++++    + Q Y    +  G L   
Sbjct: 346 AMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKAD 405

Query: 690 RDNIWVQALSLFDEVKL 706
           R N    AL LF+ + +
Sbjct: 406 RLN---HALELFNHMNI 419



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 2/108 (1%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
            Y  L+  LG  G   +A+  F    K     N      +++I  LG+ GK   A  ++E 
Sbjct: 989  YNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLY--TYNSLILYLGKEGKAAEAGKMYEE 1046

Query: 219  ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
             L  G+   V+ ++ALI  Y  SG    A + +  M      PN  TY
Sbjct: 1047 LLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTY 1094


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 217/468 (46%), Gaps = 47/468 (10%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
           T + F     A  R G   EA+++   M R+   P+ V Y  VI A C +GGV       
Sbjct: 174 TTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGV--TEAAT 231

Query: 286 IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           + ++ML  G   D  TF+ ++  +C  G + EAAR L + M+ +G    + TY  LL  +
Sbjct: 232 LLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAAR-LVDRMMTKGCMPGVMTYGFLLQGL 290

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C+  Q D A  ++  +P  N    VV ++T+I G    G+L +A  ++  M   G   D 
Sbjct: 291 CRVRQADEARAMLGRVPELN----VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 346

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +Y+ ++    KLGR   A+ + +EME  G   + VTY  +L  + K G +D+ R + E+
Sbjct: 347 HTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 406

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M A  ++ N   Y+ +I    K G   EAM + +E +  G   D+  Y+ +I  LC N  
Sbjct: 407 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 466

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE-------------CTVDDVERDL 571
           +E A  + + + +EG+  N +TYN+II A  R    +             C++D V  + 
Sbjct: 467 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYN- 525

Query: 572 GKQKESANLDAMCSQDDKD--------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
                   + AMC   + D        + E G   N +   +  L++E      KE R R
Sbjct: 526 ------GLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNV--SYNILISELC----KERRVR 573

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                 L + ++M    + P++VT++ ++N   +      A  LLE+L
Sbjct: 574 DA----LELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 617



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 216/445 (48%), Gaps = 27/445 (6%)

Query: 120 RHSVVAEEALHHVTAFARDD----VSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWS 173
           RH  V +  L+     A  D         +L +     C AD  TF  ++R +   G   
Sbjct: 203 RHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVR 262

Query: 174 KAIQCFAFAVKREERKNDQGKLASAM-----ISILGRLGKVDLAKNIFETA--LNEGYGN 226
           +A        +  +R   +G +   M     +  L R+ + D A+ +      LN     
Sbjct: 263 EA-------ARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN----- 310

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
            V  F+ +I      G   EA  ++ +M     +P+  TY+ ++    K G      V +
Sbjct: 311 -VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG-RISSAVRL 368

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             +M + G  P+ +T+  +L    + G+W+  R L  EM  +G+  +   YN ++ A+CK
Sbjct: 369 LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCK 428

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +MD A  ++ EM ++  +P++ +Y+T+I       ++++A +MF  +   G+  + ++
Sbjct: 429 DGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGIT 488

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNT++    + GR+++A+ + KEM   G   D V+YN L+    K G  D    + E+M 
Sbjct: 489 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 548

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + PN ++Y+ LI    K    ++A+++ ++    GL  D+V Y+ LI+ LCK G + 
Sbjct: 549 EKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMH 608

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSII 551
           +A++LL+++  E + P+++TYN +I
Sbjct: 609 AALNLLEKLHNENVHPDIITYNILI 633



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 188/434 (43%), Gaps = 69/434 (15%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L RLG+ + A  +       G       +  +I A    G   EA ++ N M       +
Sbjct: 185 LCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAAD 244

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRIT-------------------- 301
           + T++ V+   CG G V  +    + D M+  G  P  +T                    
Sbjct: 245 VNTFDDVVRGMCGLGRV--REAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAM 302

Query: 302 -----------FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
                      FN+++  C   G    A  L+  M  +G   D  TY+ L+  +CK  ++
Sbjct: 303 LGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRI 362

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
             A  ++ EM  K  +PNVVTY+ ++  + K G  DD   +  EM   G+ L+   YN +
Sbjct: 363 SSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 422

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +    K GR +EA+ + +EM S G   D  +YN ++       + +E   MFE +  + V
Sbjct: 423 IYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 482

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
             N +TY+T+I    + G +++A+++ +E    G   DVV Y+ LI A+CK+G V+ ++ 
Sbjct: 483 VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLV 542

Query: 531 LLDEMTKEGIRPN-----------------------------------VVTYNSIIDAFG 555
           LL+EM ++GI+PN                                   +VTYN++I+   
Sbjct: 543 LLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLC 602

Query: 556 RSATTECTVDDVER 569
           +       ++ +E+
Sbjct: 603 KMGWMHAALNLLEK 616



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 165/327 (50%), Gaps = 1/327 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A  ++ET   +G     + +S L+    + G    A+ +   M++    PN+VTY
Sbjct: 325 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTY 384

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
             V+ +  K G+ +     + ++M   G+  +   +N ++    + G  + A  L  EM 
Sbjct: 385 TIVLHSFCKNGM-WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMR 443

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            +G + DI +YNT++  +C   QM+ A  +   +  + +  N +TY+T+I    + GR  
Sbjct: 444 SQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQ 503

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           DA+ +  EM   G  LD VSYN ++    K G  + +L++ +EM   GI+ + V+YN L+
Sbjct: 504 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI 563

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
               K+ +  +   + +QM    ++P+++TY+TLI+   K G    A+ +  +     + 
Sbjct: 564 SELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVH 623

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLD 533
            D++ Y+ LI   CK  L++ A  LL+
Sbjct: 624 PDIITYNILISWHCKVRLLDDAAMLLN 650



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 193/459 (42%), Gaps = 57/459 (12%)

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQM 350
           R GVQP   ++N +L+V +R      A  L+  MVHR  +    FT+     A+C+  + 
Sbjct: 132 RFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRA 191

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           + A  ++  M      P+ V Y T+I      G + +A  + +EM  +G   D  +++ V
Sbjct: 192 NEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDV 251

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +     LGR  EA  +   M + G     +TY  LL G  +  + DE R M  ++     
Sbjct: 252 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVP---- 307

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
             N++ ++T+I      G   EA +++      G + D   YS L+  LCK G + SAV 
Sbjct: 308 ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVR 367

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER------DLGKQKESANLDAMC 584
           LL EM K+G  PNVVTY  ++ +F ++   + T   +E        L  Q  +  + A+C
Sbjct: 368 LLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC 427

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
               KD    GR D                               +G+ Q+M      P+
Sbjct: 428 ----KD----GRMDEA-----------------------------MGLIQEMRSQGCNPD 450

Query: 645 VVTFSAILNACSRCNSFEDASM----LLEELRLFDNQVYG-VAHGLLMGYRDNIWVQALS 699
           + +++ I+         E+A      LLEE  + +   Y  + H LL   RD  W  A+ 
Sbjct: 451 ICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALL---RDGRWQDAVR 507

Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
           L  E+ L   S     YN L   +   G      LV+LE
Sbjct: 508 LAKEMILHGCSLDVVSYNGLIKAMCKDGNV-DRSLVLLE 545



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 189/428 (44%), Gaps = 35/428 (8%)

Query: 156 ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI--LGRLGKVDLAK 213
           A  Y+ L+  L   G  S A++     ++  E+K     + +  I +    + G  D  +
Sbjct: 346 AHTYSILMHGLCKLGRISSAVR----LLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTR 401

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI-DA 272
            + E    +G       ++ +I A  + G   EA+ +   M+     P++ +YN +I   
Sbjct: 402 ALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHL 461

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C       +    +F+++L  GV  + IT+N+++    R G W+ A  L  EM+  G   
Sbjct: 462 CNNE--QMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSL 519

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D+ +YN L+ A+CK   +D +  ++ EM  K I PN V+Y+ +I    K  R+ DAL + 
Sbjct: 520 DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELS 579

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            +M   G+  D V+YNT+++   K+G    AL + +++ +  +  D +TYN L+  + K 
Sbjct: 580 KQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKV 639

Query: 453 GKYDEVRRMFEQ-MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF--REFKQAGLKADV 509
              D+   +  + M A C   +                 +  MQI   + FK      D 
Sbjct: 640 RLLDDAAMLLNRAMAAVCPVGD-----------------RRIMQILPDKNFKLYLHTKDS 682

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEG-----IRPNVVTYNSIIDAFGRSATTECTV 564
            LY +  +    N L+E + S +D   K G     I P     ++ I  F    +  C V
Sbjct: 683 YLYCSRANECKANILLEQSTSFIDSAPKVGGVSLSIDPGPAVGSTSILCFSSGISDLCRV 742

Query: 565 DDV-ERDL 571
           D +  RD+
Sbjct: 743 DAILSRDI 750


>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 932

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 185/362 (51%), Gaps = 3/362 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I++  ++GKV  A  I +     G  + +  +S LI+ + +      A SVF    +  
Sbjct: 465 LINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDG 524

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           LKP++V YN +I A CG G +D    + +   M +   +P   TF  ++   +R G    
Sbjct: 525 LKPDVVLYNNIITAFCGMGNMD--RAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRR 582

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +F+ M   G    + TYN L+  + +  QM  A  I+ EM    + PN  TY+T++ 
Sbjct: 583 ALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQ 642

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GYA  G  + A   F+ ++  G+ +D  +Y  +L    K GR + AL V KEM +  I +
Sbjct: 643 GYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPR 702

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +   YN L+ G+ ++G   E   + +QM+ + + P++ TY++ I+   K G  ++A +I 
Sbjct: 703 NTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEII 762

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           +E + +G+K ++  Y+ LI+   +  + E A+S  +EM   G +P+   Y+ ++ +    
Sbjct: 763 QEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSR 822

Query: 558 AT 559
           AT
Sbjct: 823 AT 824



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 3/348 (0%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +F+     G+  +V ++  LI+ Y + G   +A+ +   MK   +K N+ TY+ +I+   
Sbjct: 446 VFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFL 505

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQD 333
           K   D+ +   +F+D  ++G++PD + +N+++ A C  G + + A  +  +M        
Sbjct: 506 KLK-DWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNM-DRAICMVRQMQKERHRPT 563

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             T+  ++    +  +M  A EI   M      P V TY+ +I G  +  ++  A+ +  
Sbjct: 564 TRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILD 623

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           EM   G+G +  +Y T++  YA LG  E+A      + + G+  D  TY ALL    K G
Sbjct: 624 EMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSG 683

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           +      + ++M A  +  N   Y+ LID +++ G   EA  + ++ ++ GL  D+  Y+
Sbjct: 684 RMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYT 743

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + I+A CK G ++ A  ++ EM   GI+PN+ TY ++I+ + R++  E
Sbjct: 744 SFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPE 791



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 149/652 (22%), Positives = 277/652 (42%), Gaps = 58/652 (8%)

Query: 172 WSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAF 231
           W   +  F   +K+  RK         M+   GR G +  A+  FE+    G   + + +
Sbjct: 269 WQAVVTAFE-RIKKPARKE-----YGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVY 322

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
           S+LI AY      +EA+     MK   ++  +VTY+ ++    K G +       F++  
Sbjct: 323 SSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMG-NADAADHWFEEAK 381

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
                 + + +  ++    +    + A  L  EM  +GID  I  Y+T++D        +
Sbjct: 382 EKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEE 441

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
               +   +      P+V++Y  +I+ Y K G++  AL +   MK  GI  +  +Y+ ++
Sbjct: 442 KCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLI 501

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           + + KL  +  A  V ++    G++ D V YN ++  +   G  D    M  QM+ +   
Sbjct: 502 NGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHR 561

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P   T+  +I  +++ G  + A++IF   +++G    V  Y+ALI  L +   +  AV++
Sbjct: 562 PTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAI 621

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESANLDAMCSQDDK 589
           LDEM   G+ PN  TY +++  +     TE       V R+ G + +    +A+     K
Sbjct: 622 LDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALL----K 677

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC-----------RQEILCILGVFQKMHK 638
              ++GR  + +      +  E + +    N             R ++     + Q+M K
Sbjct: 678 SCCKSGRMQSAL-----AVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRK 732

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEE---------LRLFDNQVYGVAHGLLMGY 689
             + P++ T+++ +NAC +    + A+ +++E         L+ +   + G A       
Sbjct: 733 EGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWA------- 785

Query: 690 RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVW 749
           R ++  +ALS F+E+KL       A Y+ L   L    +   AQ  V  G      E + 
Sbjct: 786 RASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSL--LSRATFAQSYVYSGLLSVCREMIE 843

Query: 750 SESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLL--SILTGWGKHS 799
           SE  +D+     G A   VH W   +  I   G EL + L  +    W  H+
Sbjct: 844 SEMIVDM-----GTA---VH-WSRCLRKIERTGGELTEALQKTFPPDWTSHN 886



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 3/190 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L++   + G+  KA Q   F V R E          A++    + G++  A  + + 
Sbjct: 637 YTTLMQGYASLGDTEKAFQ--YFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKE 694

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +      + ++ LI  + R G   EA  +   M++  L P++ TY + I+AC K G 
Sbjct: 695 MSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAG- 753

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           D +   EI  +M  +G++P+  T+ +L+   +R  + E A + F EM   G   D   Y+
Sbjct: 754 DMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYH 813

Query: 339 TLLDAICKGA 348
            L+ ++   A
Sbjct: 814 CLVTSLLSRA 823


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 220/447 (49%), Gaps = 26/447 (5%)

Query: 158 DYTFLLRELGNRGEWSKAIQCFA-----FAVKREERKNDQGKLASAMISILGRLGKVDLA 212
           ++  + R  G      KAI+ F      F  +R  R        +++++++ + G    A
Sbjct: 117 NFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRS------FNSVLNVIIQEGLFHRA 170

Query: 213 KNIFETAL--NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
              +E  +         V +F+ +I A  + G    AI VF  M     +P++ TY  ++
Sbjct: 171 LEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLM 230

Query: 271 DA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHR 328
           D  C +  +D    V + D+M   G  P  +TFN L+  +C +G +    + L + M  +
Sbjct: 231 DGLCKEDRID--EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTK-LVDNMFLK 287

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G   +  TYNT+++ +C   ++D A  ++  M A    PN VTY T+I+G  K GR  D 
Sbjct: 288 GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDG 347

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           +++ S ++  G   +  +Y+T++S   K  + EEA+ + K+M   G + + V Y+AL+ G
Sbjct: 348 VHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDG 407

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             ++GK DE + +  +M     +PN  TYS+LI  + K G  ++A+++++E  +     +
Sbjct: 408 LCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPN 467

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
            + YS LI  LC++G +  A+ +   M   G+RP+VV Y+S+I     + + E  +    
Sbjct: 468 EICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFN 527

Query: 569 RDLGKQKESAN--------LDAMCSQD 587
             L ++ +S          L A+C Q+
Sbjct: 528 EMLCQESDSQPDVVTYNILLRALCKQN 554



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 227/461 (49%), Gaps = 32/461 (6%)

Query: 231 FSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           F  +  AYG++   ++AI +F  M   +  +  + ++N+V++   + G+ F   +E ++ 
Sbjct: 118 FILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGL-FHRALEFYEC 176

Query: 290 ML--RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            +  +  + P+ ++FN ++    + GL + A  +F EM  +  + D+FTY TL+D +CK 
Sbjct: 177 GVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKE 236

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            ++D A  ++ EM  +   P+ VT++ +I+G  K G +     +   M   G   + V+Y
Sbjct: 237 DRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTY 296

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           NT+++     G+ ++A+ +   M +S    + VTY  L+ G  KQG+  +   +   ++ 
Sbjct: 297 NTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEE 356

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
                N   YSTLI    K    +EAM ++++  + G + ++V+YSALID LC+ G ++ 
Sbjct: 357 RGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDE 416

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------L 580
           A  +L EM  +G  PN  TY+S+I  F ++  ++  +  V +++ K     N       +
Sbjct: 417 AKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIR-VWKEMAKNNCVPNEICYSVLI 475

Query: 581 DAMCSQDDKDVQEA--------GRTDNQIIKVFGQLVAEKAGQGKKENRCR--QEILCIL 630
             +C  +D  ++EA        GR     +  +  ++      G  E   +   E+LC  
Sbjct: 476 HGLC--EDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLC-- 531

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                  +   +P+VVT++ +L A  + NS   A  LL  +
Sbjct: 532 ------QESDSQPDVVTYNILLRALCKQNSISHAIDLLNSM 566



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 186/394 (47%), Gaps = 40/394 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  + +LG VD A  +F     +     V+ +  L+    +     EA+ + + M+   
Sbjct: 194 VIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEG 253

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
             P+ VT+N +I+   K G D   V ++ D+M   G  P+ +T+N+++  +C +G L + 
Sbjct: 254 CFPSSVTFNVLINGLCKKG-DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL-DK 311

Query: 318 ARNLFNEMV-----------------------------------HRGIDQDIFTYNTLLD 342
           A +L + MV                                    RG   + + Y+TL+ 
Sbjct: 312 AVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLIS 371

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            + K  + + A  +  +M  K   PN+V YS +IDG  + G+LD+A  +  EM   G   
Sbjct: 372 GLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTP 431

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           +  +Y++++  + K G  ++A+ V KEM  +    + + Y+ L+ G  + GK  E   M+
Sbjct: 432 NAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMW 491

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF--KQAGLKADVVLYSALIDALC 520
             M    + P+++ YS++I      G  +  +++F E   +++  + DVV Y+ L+ ALC
Sbjct: 492 THMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALC 551

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           K   +  A+ LL+ M   G  P+++T N  ++A 
Sbjct: 552 KQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 585



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 167/410 (40%), Gaps = 70/410 (17%)

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           T+ ++I+     G DF  + ++FD M R         F  +     +  L E A  LF  
Sbjct: 82  TFYSLIENYANSG-DFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGR 140

Query: 325 MVHR-GIDQDIFTYNTLLDAICKGAQMDLAFEI--MAEMPAKNISPNVVTYSTMIDGYAK 381
           MV      + + ++N++L+ I +      A E          NISPNV+           
Sbjct: 141 MVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVL----------- 189

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
                                   S+N V+    KLG  + A+ V +EM       D  T
Sbjct: 190 ------------------------SFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFT 225

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  L+ G  K+ + DE   + ++M+ +   P+ +T++ LI+   K G      ++     
Sbjct: 226 YCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMF 285

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
             G   + V Y+ +I+ LC  G ++ AVSLLD M      PN VTY ++I+         
Sbjct: 286 LKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLING-------- 337

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
                    L KQ  S +   + S     ++E G   N+    +  L++    + K E  
Sbjct: 338 ---------LVKQGRSVDGVHLLSS----LEERGHHANEY--AYSTLISGLFKEEKSEEA 382

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                   +G+++KM +   +PN+V +SA+++   R    ++A  +L E+
Sbjct: 383 --------MGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 424


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 212/424 (50%), Gaps = 45/424 (10%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL-KPNLVT 265
           GKV  A N  +  + + +     ++  LI+   +SG  + A+ +   ++   L +P+++ 
Sbjct: 137 GKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIM 196

Query: 266 YNAVIDACGKGGVDFKHVVEIFD---DMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
           Y A+ID+  K     K V++ +D   +M+   + P+ +TFNSL+   C  G L EA   L
Sbjct: 197 YTAIIDSFCKD----KLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAV-GL 251

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY-- 379
            NEM    ++ +++T+N L+D +CK  ++  A  +++ M  + + PNVVTY++++DGY  
Sbjct: 252 LNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFL 311

Query: 380 ---------------------------------AKAGRLDDALNMFSEMKFLGIGLDRVS 406
                                             K   +D+A+ +F EM    +  + V+
Sbjct: 312 VKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVT 371

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y++++    K GR  +   +  E+ + G   + +TYN+LL G  K  + D+   +  +MK
Sbjct: 372 YSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMK 431

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            + + P++ TY+TL+D   K G  K+A +I+++    G   ++ +Y+ +I+ LCK G  +
Sbjct: 432 DEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFD 491

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A+SLL +M   G  P+ VTY ++I A  ++      V  +   + ++ + +  +    +
Sbjct: 492 EALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARESDCSGKEQSREK 551

Query: 587 DDKD 590
            DKD
Sbjct: 552 KDKD 555



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 232/461 (50%), Gaps = 30/461 (6%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           ++ F+ ++S+  +  + + AIS    M+   ++P + T+N +I+ C            + 
Sbjct: 53  IFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILIN-CFSHLCQLNFAFSMV 111

Query: 288 DDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             +L+ G QPD +T N+LL  +C  G + EA  N  + ++ +    D  +Y TL++ +CK
Sbjct: 112 AKILKLGYQPDTVTVNTLLRGLCLNGKVKEAL-NFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 347 GAQMDLAFEIMAEMPAKN-ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
             +   A +++ ++     + P+V+ Y+ +ID + K   + DA +++SEM    I  + V
Sbjct: 171 SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           ++N+++  +  +G+ +EA+ +  EM  + +  +  T+N L+ G  K+G+  +   +   M
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
               V PN++TY++L+D Y       +A  +F      G+  +V  YS +I+ LCKN +V
Sbjct: 291 IKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMV 350

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN------ 579
           + AV L  EM  + + PN VTY+S+ID   +S      V D+  ++  + + AN      
Sbjct: 351 DEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRIS-DVWDLIDEINNRGQPANIITYNS 409

Query: 580 -LDAMCS--QDDKDVQEAGRTDNQIIK----VFGQLVAE--KAGQGKKENRCRQEILCIL 630
            L+ +C   Q DK +    +  ++ I+     +  LV    K G+ K   R  Q++LC  
Sbjct: 410 LLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLC-- 467

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               K + L I+     ++ ++N   +   F++A  LL ++
Sbjct: 468 ----KGYPLNIR----MYTVMINGLCKEGFFDEALSLLSQM 500



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 189/363 (52%), Gaps = 6/363 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+    L +++ A ++    L  GY       + L+     +G  +EA++  + + R  
Sbjct: 94  LINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKR 153

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG---VQPDRITFNSLLAVCSRGGLW 315
              + V+Y  +I+   K G + +  +++   +   G   V+PD I + +++    +  L 
Sbjct: 154 FHLDQVSYGTLINGLCKSG-ETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLV 210

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A +L++EM+ + I  ++ T+N+L+   C   Q+  A  ++ EM   N++PNV T++ +
Sbjct: 211 IDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNIL 270

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K G +  A ++ S M   G+  + V+Y +++  Y  +    +A  V   +   G+
Sbjct: 271 IDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGV 330

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +  +Y+ ++ G  K    DE  ++F++M    ++PN +TYS+LID   K G   +   
Sbjct: 331 TPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWD 390

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +  E    G  A+++ Y++L++ LCKN  V+ A++LL +M  EGI+P++ TY +++D   
Sbjct: 391 LIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLC 450

Query: 556 RSA 558
           ++ 
Sbjct: 451 KNG 453



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 225/487 (46%), Gaps = 40/487 (8%)

Query: 252 NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
           NS    N + ++    + ID        F H++ +      N   P    FN +L+   +
Sbjct: 12  NSFLLLNRRLHIQPLPSFIDNLDDAVSSFNHILHM------NNHTPPIFEFNKILSSLVK 65

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
              ++ A +   +M  +GI  ++FT+N L++      Q++ AF ++A++      P+ VT
Sbjct: 66  MNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVT 125

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
            +T++ G    G++ +ALN    +      LD+VSY T+++   K G    AL + +++E
Sbjct: 126 VNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIE 185

Query: 432 S-SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
               +R D + Y A++  + K     +   ++ +M    + PN++T+++LI  +   G  
Sbjct: 186 GLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQL 245

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           KEA+ +  E     +  +V  ++ LID LCK G V+ A S+L  M K+G+ PNVVTY S+
Sbjct: 246 KEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSL 305

Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
           +D +            + +++ K K   N           +   G T N  +  +  ++ 
Sbjct: 306 MDGYF-----------LVKEVNKAKHVFN----------TISLRGVTPN--VHSYSVMI- 341

Query: 611 EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                G  +N+   E    + +F++MH   + PN VT+S++++   +     D   L++E
Sbjct: 342 ----NGLCKNKMVDE---AVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDE 394

Query: 671 LRLFDNQVYGVAHG-LLMGYRDNIWV-QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           +         + +  LL G   N  V +A++L  ++K        + Y  L D L   G+
Sbjct: 395 INNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGR 454

Query: 729 KRGAQLV 735
            + AQ +
Sbjct: 455 LKDAQRI 461



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 120/276 (43%), Gaps = 44/276 (15%)

Query: 159 YTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF 216
           YTF  L+  L   GE  KA    +  +K+    N      ++++     + +V+ AK++F
Sbjct: 265 YTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVT--YTSLMDGYFLVKEVNKAKHVF 322

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN-------------- 262
            T    G    V+++S +I+   ++    EA+ +F  M   N+ PN              
Sbjct: 323 NTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKS 382

Query: 263 ---------------------LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
                                ++TYN++++  C    VD    + +   M   G+QPD  
Sbjct: 383 GRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVD--KAIALLTKMKDEGIQPDMS 440

Query: 301 TFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           T+ +L+  +C  G L +A R ++ +++ +G   +I  Y  +++ +CK    D A  ++++
Sbjct: 441 TYTTLVDGLCKNGRLKDAQR-IYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQ 499

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           M      P+ VTY T+I    K  +   A+ +  EM
Sbjct: 500 MEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 82/167 (49%), Gaps = 1/167 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++I  L + G++    ++ +   N G    +  +++L++   ++    +AI++   MK 
Sbjct: 373 SSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKD 432

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             ++P++ TY  ++D   K G   K    I+ D+L  G   +   +  ++    + G ++
Sbjct: 433 EGIQPDMSTYTTLVDGLCKNG-RLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFD 491

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
            A +L ++M   G   D  TY TL+ A+ K  +   A +++ EM A+
Sbjct: 492 EALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538


>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
          Length = 950

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 187/368 (50%), Gaps = 4/368 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I++  ++GK+  A  +      EG  + +  +S +I+ + +      A +VF  M +  
Sbjct: 488 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 547

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           +KP+++ YN +I A CG G +D    ++   +M +   +P   TF  ++   ++ G    
Sbjct: 548 MKPDVILYNNIISAFCGMGNMD--RAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRR 605

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           +  +F+ M   G    + T+N L++ + +  QM+ A EI+ EM    +S N  TY+ ++ 
Sbjct: 606 SLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 665

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GYA  G    A   F+ ++  G+ +D  +Y  +L    K GR + AL V KEM +  I +
Sbjct: 666 GYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPR 725

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           ++  YN L+ G+ ++G   E   + +QMK + V P++ TY++ I   SK G    A Q  
Sbjct: 726 NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTI 785

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-FGR 556
            E +  G+K ++  Y+ LI    +  L E A+S  +EM   GI+P+   Y+ ++ +   R
Sbjct: 786 EEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSR 845

Query: 557 SATTECTV 564
           ++  E  +
Sbjct: 846 ASIAEAYI 853



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/542 (23%), Positives = 237/542 (43%), Gaps = 37/542 (6%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           M+   GR G +  A+  FE     G   T   +++LI AY       EA+S    MK   
Sbjct: 313 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 372

Query: 259 LKPNLVTYNAVIDACGKGG----VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           ++ +LVTY+ ++    K G     D+      FD+  R     +   +  ++    +   
Sbjct: 373 IEMSLVTYSVIVGGFSKAGHAEAADY-----WFDEAKRIHKTLNASIYGKIIYAHCQTCN 427

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E A  L  EM   GID  I  Y+T++D     A       +   +     +P VVTY  
Sbjct: 428 MERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGC 487

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I+ Y K G++  AL +   MK  G+  +  +Y+ +++ + KL  +  A  V ++M   G
Sbjct: 488 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 547

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++ D + YN ++  +   G  D   +  ++M+     P   T+  +I  Y+K G  + ++
Sbjct: 548 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 607

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++F   ++ G    V  ++ LI+ L +   +E AV +LDEMT  G+  N  TY  I+  +
Sbjct: 608 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 667

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQD-DKDVQEAGRTDNQIIKVFGQLVAEKA 613
                T    +   R    Q E  ++D    +   K   ++GR  + +      +  E +
Sbjct: 668 ASVGDTGKAFEYFTR---LQNEGLDVDIFTYEALLKACCKSGRMQSAL-----AVTKEMS 719

Query: 614 GQGKKENRCRQEILC-----------ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
            +    N     IL               + Q+M K  +KP++ T+++ ++ACS+     
Sbjct: 720 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 779

Query: 663 DASMLLEELRLF----DNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYN 717
            A+  +EE+       + + Y     L+ G+ R ++  +ALS ++E+K M      A Y+
Sbjct: 780 RATQTIEEMEALGVKPNIKTYTT---LIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 836

Query: 718 AL 719
            L
Sbjct: 837 CL 838



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 183/391 (46%), Gaps = 12/391 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ ++       +W+ A   F   VK E  K D   L + +IS    +G +D A    + 
Sbjct: 520 YSMMINGFVKLKDWANAFAVFEDMVK-EGMKPDV-ILYNNIISAFCGMGNMDRAIQTVKE 577

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                +  T   F  +I  Y +SG  + ++ VF+ M+R    P + T+N +I+   +   
Sbjct: 578 MQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKR- 636

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +  VEI D+M   GV  +  T+  ++   +  G    A   F  + + G+D DIFTY 
Sbjct: 637 QMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYE 696

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            LL A CK  +M  A  +  EM A+NI  N   Y+ +IDG+A+ G + +A ++  +MK  
Sbjct: 697 ALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKE 756

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D  +Y + +S  +K G    A    +EME+ G++ +  TY  L+ G+ +    ++ 
Sbjct: 757 GVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKA 816

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVY------SKGGLYKEAMQIFREFKQAGLKADVVLY 512
              +E+MKA  + P+   Y  L+         ++  +Y   M I +E  +AGL  D+   
Sbjct: 817 LSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTA 876

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
                 LCK   +E++   L E  ++   P+
Sbjct: 877 VHWSKCLCK---IEASGGELTETLQKTFPPD 904



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 173/377 (45%), Gaps = 9/377 (2%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
           G+ SKA++     V +EE      K  S MI+   +L     A  +FE  + EG    V 
Sbjct: 496 GKISKALE--VSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 553

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            ++ +ISA+   G    AI     M++   +P   T+  +I    K G D +  +E+FD 
Sbjct: 554 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG-DMRRSLEVFDM 612

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M R G  P   TFN L+         E A  + +EM   G+  +  TY  ++        
Sbjct: 613 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 672

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              AFE    +  + +  ++ TY  ++    K+GR+  AL +  EM    I  +   YN 
Sbjct: 673 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNI 732

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++  +A+ G   EA  + ++M+  G++ D  TY + +    K G  +   +  E+M+A  
Sbjct: 733 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 792

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA- 528
           V PN+ TY+TLI  +++  L ++A+  + E K  G+K D  +Y  L+ +L     +  A 
Sbjct: 793 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 852

Query: 529 -----VSLLDEMTKEGI 540
                +++  EM + G+
Sbjct: 853 IYSGVMTICKEMVEAGL 869



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 140/317 (44%), Gaps = 39/317 (12%)

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G +++ V+  F+ +     +P R  F  ++    R G    AR  F  M  RGI      
Sbjct: 289 GDNWQAVISAFEKI----SKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 344

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG------------- 383
           Y +L+ A   G  MD A   + +M  + I  ++VTYS ++ G++KAG             
Sbjct: 345 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK 404

Query: 384 RLDDALN----------------------MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
           R+   LN                      +  EM+  GI      Y+T++  Y  +   +
Sbjct: 405 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 464

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           + L+V K ++  G     VTY  L+  Y K GK  +   +   MK + V  NL TYS +I
Sbjct: 465 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI 524

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           + + K   +  A  +F +  + G+K DV+LY+ +I A C  G ++ A+  + EM K   R
Sbjct: 525 NGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR 584

Query: 542 PNVVTYNSIIDAFGRSA 558
           P   T+  II  + +S 
Sbjct: 585 PTTRTFMPIIHGYAKSG 601



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 52/259 (20%), Positives = 107/259 (41%), Gaps = 46/259 (17%)

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P+   +  ++  Y + G    A + F   +  G+     +Y++LI A      ++ A+S 
Sbjct: 305 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 364

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECT---VDDVER---DLGKQKESANLDAMCS 585
           + +M +EGI  ++VTY+ I+  F ++   E      D+ +R    L        + A C 
Sbjct: 365 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 424

Query: 586 QDD--------KDVQEAG-----RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
             +        ++++E G        + ++  +  +  EK G               L V
Sbjct: 425 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKG---------------LVV 469

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGL------L 686
           F+++ +    P VVT+  ++N  ++      A   LE  R+   +  GV H L      +
Sbjct: 470 FKRLKECGFTPTVVTYGCLINLYTKVGKISKA---LEVSRVMKEE--GVKHNLKTYSMMI 524

Query: 687 MGY-RDNIWVQALSLFDEV 704
            G+ +   W  A ++F+++
Sbjct: 525 NGFVKLKDWANAFAVFEDM 543


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 217/439 (49%), Gaps = 47/439 (10%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD A ++F + L++    T + F+ ++ +  +S +    +S+   M+   + PN VT+N 
Sbjct: 49  VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNI 108

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           +I+  C  G + F     +   +L+ G +PD IT N+ +   C +G + +A  N  +++V
Sbjct: 109 LINCFCQLGLIPF--AFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQAL-NFHDKLV 165

Query: 327 HRGIDQDIFTYNTLLDAICK---------------GAQMDL------------------- 352
             G   D  +Y TL++ +CK               G  + L                   
Sbjct: 166 ALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVN 225

Query: 353 -AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            AF++ +EM AK ISP+VVTYS +I G+   G+L DA+++F++M    I  D  ++N ++
Sbjct: 226 DAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 285

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
             + K GR ++A  V   M    I+ +  T+N L+ G+ K  K  E + +F  M    + 
Sbjct: 286 DGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIK 345

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           PN++TY +L+D Y       +A +IF    Q G+ A+V  Y+ +I+  CK   V+ A+ L
Sbjct: 346 PNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKL 405

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKE----SANLDAMCS 585
             EM  + I P+VVTYNS+ID   +S         V    D G+       ++ L+A+ +
Sbjct: 406 FIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLT 465

Query: 586 Q-DDKDVQEAGRTDNQIIK 603
           +  D+ +Q    TD  +IK
Sbjct: 466 KLKDQGIQPNMHTDTILIK 484



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 216/440 (49%), Gaps = 17/440 (3%)

Query: 245 QEAISVFNSMK-------RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP 297
           Q++ ++FN +K          L+ N + Y+++        VD    V +F+ +L      
Sbjct: 9   QKSFNLFNFLKIPISISFLILLQKNFIPYSSISTTFHSNDVD--GAVSLFNSLLHQNPTL 66

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
               FN +L    +   +    +L  +M   GI+ +  T+N L++  C+   +  AF ++
Sbjct: 67  TAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVL 126

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
           A++      P+++T +T I G+   G++  ALN   ++  LG  LD+VSY T+++   K+
Sbjct: 127 AKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKV 186

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G    AL + + ++   ++ +AV YN ++ G  K    ++   ++ +M A  +SP+++TY
Sbjct: 187 GETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTY 246

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           S LI  +   G  K+A+ +F +     +K DV  ++ L+D  CK G ++ A ++LD M  
Sbjct: 247 SALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMI 306

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD-----KDVQ 592
           + I+PNV T+N+++D F +    +     V   + KQ    N+   CS  D     K V 
Sbjct: 307 QDIKPNVSTFNTLVDGFCKDRKMK-EGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVN 365

Query: 593 EAGRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKIKPNVVTFSAI 651
           +A +  N + +  G      +        C+ +++   + +F +MH   I P+VVT++++
Sbjct: 366 KAKKIFNTMSQR-GVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSL 424

Query: 652 LNACSRCNSFEDASMLLEEL 671
           ++   +      A  L+ E+
Sbjct: 425 IDGLCKSGKISYAFQLVNEM 444



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 182/358 (50%), Gaps = 19/358 (5%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++  A N  +  +  G+     ++  LI+   + G  + A+ +   +    ++ N V Y
Sbjct: 152 GQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMY 211

Query: 267 NAVIDACGKGGVDFKHVVEIFD---DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           N VID   K     KHV + FD   +M+   + PD +T+++L+      G  + A +LFN
Sbjct: 212 NTVIDGMSKD----KHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFN 267

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           +M+   I  D++T+N L+D  CK  ++  A  ++  M  ++I PNV T++T++DG+ K  
Sbjct: 268 KMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDR 327

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           ++ +   +F+ M   GI  + V+Y +++  Y  + +  +A  +   M   G+  +  +YN
Sbjct: 328 KMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYN 387

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            ++ G+ K  K D+  ++F +M    + P+++TY++LID   K G    A Q+  E    
Sbjct: 388 IMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDR 447

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           G   +++ Y+++++A            LL ++  +GI+PN+ T   +I    +S   E
Sbjct: 448 GQPPNIITYNSILNA------------LLTKLKDQGIQPNMHTDTILIKGLCQSGKLE 493



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 146/269 (54%), Gaps = 13/269 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+I     +GK+  A ++F   + E     VY F+ L+  + + G  ++A +V + M  
Sbjct: 247 SALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMI 306

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            ++KPN+ T+N ++D   K     K    +F  M++ G++P+ +T+ SL+          
Sbjct: 307 QDIKPNVSTFNTLVDGFCKDR-KMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVN 365

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A+ +FN M  RG+  ++ +YN +++  CK  ++D A ++  EM  K+I P+VVTY+++I
Sbjct: 366 KAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLI 425

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG  K+G++  A  + +EM   G   + ++YN++L+          ALL   +++  GI+
Sbjct: 426 DGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILN----------ALLT--KLKDQGIQ 473

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            +  T   L+ G  + GK +  R++FE +
Sbjct: 474 PNMHTDTILIKGLCQSGKLEAARKVFEDL 502



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/244 (21%), Positives = 109/244 (44%), Gaps = 10/244 (4%)

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           A  +N +LG   K   Y  V  + +QM+ + ++PN +T++ LI+ + + GL   A  +  
Sbjct: 68  AFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLA 127

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +  + G + D++  +  I   C  G +  A++  D++   G   + V+Y ++I+   +  
Sbjct: 128 KILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVG 187

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
            T   +  + R  GK  +   L+A+      D     +  N    ++ ++VA++      
Sbjct: 188 ETRAALQLLRRVDGKLVQ---LNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVV 244

Query: 619 ENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                     I+G       +F KM    IKP+V TF+ +++   +    + A  +L+ +
Sbjct: 245 TYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMM 304

Query: 672 RLFD 675
            + D
Sbjct: 305 MIQD 308



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 79/156 (50%), Gaps = 13/156 (8%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           +V+ AK IF T    G    V++++ +I+ + +     +A+ +F  M   ++ P++VTYN
Sbjct: 363 QVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYN 422

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           ++ID   K G    +  ++ ++M   G  P+ IT+NS+L              L  ++  
Sbjct: 423 SLIDGLCKSG-KISYAFQLVNEMHDRGQPPNIITYNSILNA------------LLTKLKD 469

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
           +GI  ++ T   L+  +C+  +++ A ++  ++  K
Sbjct: 470 QGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505


>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 513

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 200/432 (46%), Gaps = 37/432 (8%)

Query: 157 DDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF 216
           +D    + E   + +W  AI  + + ++    K D G   + ++   GR  +   A+N F
Sbjct: 66  EDLMETVAEFRRQRKWRSAIVIYEWILQGSMFKPDVGCF-NMLMDAYGRTKQWTEAENTF 124

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
                     T  +F+ L++AY R G  + A  V + MK  N  P LVTYN  ++   K 
Sbjct: 125 HLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKS 184

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLL---------------------AVC------ 309
           G  ++   ++F +M   GV P   TF  ++                     A+C      
Sbjct: 185 G-SWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFT 243

Query: 310 --------SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
                   +R G    A  +F E+   G   DI+TYN LL+A  +G     A E+   M 
Sbjct: 244 YTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETML 303

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
              +  + V+Y+ +ID + +AG + DA  ++  MK +G      S+  +LS + K GR  
Sbjct: 304 EAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVT 363

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           +A    + +ES G+  D   +N+LLG YG  G+ D++  ++E M+     P+++T +TLI
Sbjct: 364 DAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLI 423

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           +VY++GG  + A +IF   +  G   DV+ +++L+ A  K  L    VS+  +M   G  
Sbjct: 424 NVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGCI 483

Query: 542 PNVVTYNSIIDA 553
           P+  T   ++ +
Sbjct: 484 PDRATAKVLLSS 495



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 185/393 (47%), Gaps = 32/393 (8%)

Query: 280 FKHVVEIFDDMLRNGV-QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           ++  + I++ +L+  + +PD   FN L+    R   W  A N F+ M          ++N
Sbjct: 81  WRSAIVIYEWILQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFN 140

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L+ A  +G Q++ A  ++ EM   N SP +VTY+T ++   K+G    A ++F EM+  
Sbjct: 141 VLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNR 200

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+     ++  +++IY K     +A  + + M  +       TY AL+  + ++G     
Sbjct: 201 GVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRA 260

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +F ++++    P++ TY+ L++ YS+GG    A ++F    +AG+KAD V Y+ LIDA
Sbjct: 261 EEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDA 320

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
             + GL+  A ++ D M K G +P + ++  ++ AF ++      V D E  + +     
Sbjct: 321 FGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGR----VTDAENFVRR----- 371

Query: 579 NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
            L++M  + D               +F  L+      G+ +         +  +++ M  
Sbjct: 372 -LESMGVEPD-------------TFMFNSLLGAYGNSGRMDK--------MESLYESMQG 409

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              KP+++T + ++N  ++    E A  +   L
Sbjct: 410 SVCKPDIITLNTLINVYAQGGYIERAEEIFNSL 442



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 1/270 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I+   R G    A+ IF    + G+   +Y ++AL+ AY R G+   A  VF +M  
Sbjct: 245 TALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLE 304

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +K + V+YN +IDA G+ G+       I+D M + G +P   +   LL+   + G   
Sbjct: 305 AGVKADHVSYNILIDAFGRAGL-ISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVT 363

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A N    +   G++ D F +N+LL A     +MD    +   M      P+++T +T+I
Sbjct: 364 DAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLI 423

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           + YA+ G ++ A  +F+ ++  G   D +S+ +++  Y+K   + + + V ++M  +G  
Sbjct: 424 NVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGCI 483

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
            D  T   LL       +  EV  M E  +
Sbjct: 484 PDRATAKVLLSSCRGPEQVKEVTDMIETQR 513



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/225 (21%), Positives = 98/225 (43%), Gaps = 32/225 (14%)

Query: 449 YGKQGKYDEVRRMFEQ-MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           + +Q K+     ++E  ++     P++  ++ L+D Y +   + EA   F   K+     
Sbjct: 75  FRRQRKWRSAIVIYEWILQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCLP 134

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
               ++ L+ A  + G +E A  +L EM +    P +VTYN+ ++   +S + +   +DV
Sbjct: 135 TETSFNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQL-AEDV 193

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
            R++                ++ V  A  T   +I ++G          K  +  + E L
Sbjct: 194 FREM---------------QNRGVPPAVNTFTLMINIYG----------KAHHSAKAEHL 228

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                FQ M K    P++ T++A++NA +R  +   A  +  EL+
Sbjct: 229 -----FQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQ 268


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 184/345 (53%), Gaps = 3/345 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + + A+ +G+      + +LI+     G  + A+ +FN  +  +LKP+LV YN+++ 
Sbjct: 238 ATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVK 297

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGI 330
              + G+   H +++ ++M+ +G  PD  T+N ++  +C  G + +AA  + N+ + +G 
Sbjct: 298 GLCRQGL-ILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAV-VMNDAIVKGY 355

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             D+FT+NT++D  CK  ++D A +++  M    I+P+ +TY+++++G  KAG+  +   
Sbjct: 356 LPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNE 415

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
            F EM   G   + ++YN ++  + K+ + EEA  V   M   G+  D +++N L+ G+ 
Sbjct: 416 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFC 475

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           + G  D    +F+++     S    T++ LI  YS     + A +IF E    G K D+ 
Sbjct: 476 RNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLY 535

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            Y  L+D  CK   V+ A   L EM  +G  P++ T+  ++++  
Sbjct: 536 TYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLA 580



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 181/355 (50%), Gaps = 3/355 (0%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           KV  A       +N+G     + ++ +I  Y +    QEA  +          P+ VTY 
Sbjct: 199 KVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYC 258

Query: 268 AVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           ++I+  C +G  D +  +E+F++     ++PD + +NSL+    R GL   A  + NEMV
Sbjct: 259 SLINGLCAEG--DVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMV 316

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
             G   DI+TYN +++ +CK   +  A  +M +   K   P+V T++TMIDGY K  +LD
Sbjct: 317 EDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLD 376

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            AL +   M   GI  D ++YN+VL+   K G+ +E     +EM   G R +A+TYN L+
Sbjct: 377 SALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILI 436

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
             + K  + +E   +  +M  D + P+ ++++TLI  + + G    A  +F++  + G  
Sbjct: 437 ENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYS 496

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           A    ++ LI A      ++ A  +  EM  +G +P++ TY  ++D   ++A  +
Sbjct: 497 ATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVD 551



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 175/362 (48%), Gaps = 11/362 (3%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A+++F+  L       V  F+ ++ A  + G   E+ ++   + +  +  N  T N  I 
Sbjct: 99  ARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIR 158

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGI 330
              +GG   +  V + + M    + PD +T+N+L+  +C    + EAA+ L   M+++G 
Sbjct: 159 GLCEGG-RLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYL-RRMMNQGC 215

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             D FTYNT++D  CK   +  A E++ +   K   P+ VTY ++I+G    G ++ AL 
Sbjct: 216 IPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALE 275

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +F+E +   +  D V YN+++    + G    AL V  EM   G   D  TYN ++ G  
Sbjct: 276 LFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLC 335

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K G   +   +          P++ T++T+ID Y K      A+Q+       G+  D +
Sbjct: 336 KMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAI 395

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y+++++ LCK G  +      +EM  +G RPN +TYN +I+ F       C ++ +E  
Sbjct: 396 TYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENF-------CKINQLEEA 448

Query: 571 LG 572
            G
Sbjct: 449 SG 450



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 165/349 (47%), Gaps = 3/349 (0%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++I+ L   G V+ A  +F  A  +     +  +++L+    R G    A+ V N M   
Sbjct: 259 SLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVED 318

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
              P++ TYN VI+   K G +      + +D +  G  PD  TFN+++   C R  L +
Sbjct: 319 GCHPDIWTYNIVINGLCKMG-NISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKL-D 376

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +A  L   M   GI  D  TYN++L+ +CK  +     E   EM  K   PN +TY+ +I
Sbjct: 377 SALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILI 436

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           + + K  +L++A  +   M   G+  D +S+NT++  + + G  + A L+ ++++  G  
Sbjct: 437 ENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYS 496

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             A T+N L+G Y  +       ++F +M +    P+L TY  L+D   K      A   
Sbjct: 497 ATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVH 556

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
             E    G    +  +  ++++L  N  V  AV+++  M + G+ P VV
Sbjct: 557 LAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV 605



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 195/444 (43%), Gaps = 18/444 (4%)

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M  +   P    YNA++DA       D  H  +++  ML  GV PD  T    +      
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAH--KVYVRMLSAGVAPDARTHTVRIKSFCIT 58

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G    A  L   +  RG D     Y T++  +        A  +  EM  +++ P+V T+
Sbjct: 59  GRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATF 118

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + ++    + G + ++  + +++   G+ +++ + N  +    + GR EEA+ + + M++
Sbjct: 119 NNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDA 178

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             I  D VTYN L+ G  K  K  E  +   +M      P+  TY+T+ID Y K  + +E
Sbjct: 179 Y-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQE 237

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A ++ ++    G   D V Y +LI+ LC  G VE A+ L +E   + ++P++V YNS++ 
Sbjct: 238 ATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVK 297

Query: 553 AFGRSA--------TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
              R            E   D    D+       N   +C     ++ +A    N  I V
Sbjct: 298 GLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVIN--GLCKMG--NISDAAVVMNDAI-V 352

Query: 605 FGQLVAEKAGQGKKENRC-RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
            G L          +  C R ++   L + ++M    I P+ +T++++LN   +    ++
Sbjct: 353 KGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKE 412

Query: 664 ASMLLEELRLFDNQVYGVAHGLLM 687
            +   EE+ L   +   + + +L+
Sbjct: 413 VNETFEEMILKGCRPNAITYNILI 436



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/418 (22%), Positives = 188/418 (44%), Gaps = 22/418 (5%)

Query: 144 DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           ++LK   FK    D  T+  L+  L   G+  +A++ F  A  ++ + +    + ++++ 
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLV--VYNSLVK 297

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
            L R G +  A  +    + +G    ++ ++ +I+   + G   +A  V N        P
Sbjct: 298 GLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLP 357

Query: 262 NLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           ++ T+N +ID  C +  +D    +++ + M   G+ PD IT+NS+L    + G  +    
Sbjct: 358 DVFTFNTMIDGYCKRLKLD--SALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNE 415

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
            F EM+ +G   +  TYN L++  CK  Q++ A  ++  M    + P+ ++++T+I G+ 
Sbjct: 416 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFC 475

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           + G LD A  +F ++   G      ++N ++  Y+     + A  +  EM S G + D  
Sbjct: 476 RNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLY 535

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY  L+ G  K    D       +M +    P++ T+  +++  +      EA+ I    
Sbjct: 536 TYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIM 595

Query: 501 KQAGL------------KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            + G+            K ++     L++ L K G +        E+  EG+R N +T
Sbjct: 596 VRMGVVPEVVDTILSTDKKEIAAPKILVEELMKKGHISYPTY---EVLHEGVRDNKLT 650


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 234/514 (45%), Gaps = 42/514 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + M++   ++G V +AK  F   +  G+    + +++LI  Y +     +A  VF  M +
Sbjct: 194 NTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQ 253

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
                N V+Y  +I   C  G +D    +E+F  M  +G  PD  T+  L+A     G  
Sbjct: 254 EGCLRNEVSYTNLIHGFCEVGKID--EALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKE 311

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A   F EMV  GI+ +++TY  L+D  CK  +MD   E+++ M  K +  +VV ++ +
Sbjct: 312 TEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNAL 371

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDGY K G ++DA+ +   MK   +  +  +YN ++  + +    + A+ +  +M  + +
Sbjct: 372 IDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKL 431

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             + VTYN L+ G  K    D   R+   M  D   P+  T+   ID   K G  ++A Q
Sbjct: 432 SPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQ 491

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F   K+   +A+  LY+ALID  CK      A  L   M  EG  PN +T+N ++D   
Sbjct: 492 VFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLD--- 548

Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
                           G +KE    DAM   D     +A  T    +  +  L+ E   +
Sbjct: 549 ----------------GLRKEGKVEDAMSLVDVMGKFDAKPT----VHTYTILIEEILRE 588

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA-CSRCNSFEDASMLL---EEL 671
              +   R  +        +M     +PNVVT++A + A C +    E   M++   EE 
Sbjct: 589 SDFD---RANMF-----LDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEG 640

Query: 672 RLFDNQVYGV---AHGLLMGYRDNIWVQALSLFD 702
            L D+ +Y V   A+G + G  D+ +   + +FD
Sbjct: 641 ILLDSFIYDVLVNAYGCI-GQLDSAFGVLIRMFD 673



 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 252/541 (46%), Gaps = 32/541 (5%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+      G+ ++A++ F   V+     N      + +I    ++GK+D    +  T
Sbjct: 298 YTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYT--YTVLIDYFCKVGKMDEGMEMLST 355

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            L +G  ++V  F+ALI  Y + G  ++AI V +SMK   + PN  TYN +I   C K  
Sbjct: 356 MLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKS 415

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           +D    + + + M  N + P+ +T+N+L+    +  + ++A  L + M+  G   D  T+
Sbjct: 416 MD--RAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTF 473

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
              +D +CK  +++ A ++   +  K+   N   Y+ +IDGY KA +  DA  +F  M F
Sbjct: 474 CAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLF 533

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   + +++N +L    K G+ E+A+ +   M     +    TY  L+    ++  +D 
Sbjct: 534 EGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDR 593

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
                +QM +    PN++TY+  I  Y + G   EA ++  + K+ G+  D  +Y  L++
Sbjct: 594 ANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVN 653

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
           A    G ++SA  +L  M   G  P+  TY+ ++         +         +G    S
Sbjct: 654 AYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNK-------EGMGLDLNS 706

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN----------RCRQEIL 627
            N+    S D+ ++ +    D +II +  + + E   QG   N           C+ E L
Sbjct: 707 TNI----SVDNANIWKIA--DFEIITMLFEKMVE---QGCVPNVNTYSKLIKGLCKVEHL 757

Query: 628 CI-LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
            +   +F  M +  I P+    +++L++C +    E+A  LL+ +  +++  +  ++ LL
Sbjct: 758 SLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLL 817

Query: 687 M 687
           +
Sbjct: 818 V 818



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 195/414 (47%), Gaps = 6/414 (1%)

Query: 146 LKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGR 205
           L KF F  C +  YT L+       E   A + F    +    +N+     + +I     
Sbjct: 216 LMKFGF-CCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVS--YTNLIHGFCE 272

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           +GK+D A  +F     +G    V  ++ L++A+   G   EA+  F  M    ++PN+ T
Sbjct: 273 VGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYT 332

Query: 266 YNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           Y  +ID  C  G +D    +E+   ML  G+    + FN+L+    + G+ E A  + + 
Sbjct: 333 YTVLIDYFCKVGKMD--EGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDS 390

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M    +  +  TYN L+   C+   MD A  ++ +M    +SPN+VTY+T+I G  KA  
Sbjct: 391 MKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARV 450

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +D A  +   M   G   D+ ++   +    K+G+ E+A  V + ++      +   Y A
Sbjct: 451 VDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTA 510

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ GY K  K+ +   +F++M  +   PN +T++ L+D   K G  ++AM +     +  
Sbjct: 511 LIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFD 570

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            K  V  Y+ LI+ + +    + A   LD+M   G +PNVVTY + I A+ R  
Sbjct: 571 AKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQG 624



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 230/491 (46%), Gaps = 56/491 (11%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR-----------------YNLKPNLVT 265
           G+ +TV+++  L+    R+G+ + A +V NSM +                 +    ++ +
Sbjct: 98  GFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSVTS 157

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           YN +     + G+    +  +F DML +GV+P+ I+FN+++    + G    A+  F  +
Sbjct: 158 YNRLFMVLSRFGL-IDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGL 216

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           +  G   D FTY +L+   CK  ++  A+++   MP +    N V+Y+ +I G+ + G++
Sbjct: 217 MKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKI 276

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D+AL +F +MK  G   D  +Y  +++ + ++G+  EAL   +EM  +GI  +  TY  L
Sbjct: 277 DEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVL 336

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +  + K GK DE   M   M    +  +++ ++ LID Y K G+ ++A+ +    K   +
Sbjct: 337 IDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKV 396

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII-------------- 551
             +   Y+ LI   C+   ++ A++LL++M +  + PN+VTYN++I              
Sbjct: 397 CPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWR 456

Query: 552 -------DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
                  D F     T C   D    +GK +++        Q  + ++E     N+ +  
Sbjct: 457 LHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQA-------HQVFESLKEKHAEANEFL-- 507

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
                A   G  K E      +L     F++M      PN +TF+ +L+   +    EDA
Sbjct: 508 ---YTALIDGYCKAEKFSDAHLL-----FKRMLFEGCFPNSITFNVLLDGLRKEGKVEDA 559

Query: 665 SMLLEELRLFD 675
             L++ +  FD
Sbjct: 560 MSLVDVMGKFD 570



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 196/419 (46%), Gaps = 8/419 (1%)

Query: 142 LGDILKKFEFK-----LCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA 196
           LGD  K FE       L     YT L+      G+  +A++ F F +K +    D     
Sbjct: 241 LGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELF-FQMKEDGCFPDVPT-Y 298

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +++    +GK   A   FE  +  G    VY ++ LI  + + G   E + + ++M  
Sbjct: 299 TVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLE 358

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L  ++V +NA+ID   K G+  +  + + D M  N V P+  T+N L+    R    +
Sbjct: 359 KGLVSSVVPFNALIDGYCKRGM-MEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMD 417

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L N+M    +  ++ TYNTL+  +CK   +D A+ +   M      P+  T+   I
Sbjct: 418 RAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFI 477

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D   K G+++ A  +F  +K      +   Y  ++  Y K  +F +A L+ K M   G  
Sbjct: 478 DCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCF 537

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +++T+N LL G  K+GK ++   + + M      P + TY+ LI+   +   +  A   
Sbjct: 538 PNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMF 597

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
             +   +G + +VV Y+A I A C+ G +  A  ++ ++ +EGI  +   Y+ +++A+G
Sbjct: 598 LDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYG 656



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 177/403 (43%), Gaps = 31/403 (7%)

Query: 166 LGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYG 225
           L   G+  +A Q F    ++    N+   L +A+I    +  K   A  +F+  L EG  
Sbjct: 480 LCKMGKVEQAHQVFESLKEKHAEANE--FLYTALIDGYCKAEKFSDAHLLFKRMLFEGCF 537

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
                F+ L+    + G  ++A+S+ + M +++ KP + TY  +I+   +   DF     
Sbjct: 538 PNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRES-DFDRANM 596

Query: 286 IFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
             D M+ +G QP+ +T+ + + A C +G L EA   +  ++   GI  D F Y+ L++A 
Sbjct: 597 FLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEA-EEMVVKIKEEGILLDSFIYDVLVNAY 655

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI-----DGYAKAG----------RLDDA- 388
               Q+D AF ++  M      P+  TYS ++     + Y K G           +D+A 
Sbjct: 656 GCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNAN 715

Query: 389 ----------LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
                       +F +M   G   +  +Y+ ++    K+     A  +   M+ SGI   
Sbjct: 716 IWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPS 775

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
              +N+LL    K G ++E  R+ + M       +L +Y  L+    + G  ++A +IFR
Sbjct: 776 ENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFR 835

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
                G   D V++  L+D L + G V+    L D M K G R
Sbjct: 836 SLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCR 878



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 135/336 (40%), Gaps = 30/336 (8%)

Query: 136 ARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL 195
             D +SL D++ KF+ K      YT L+ E+    ++ +A       +    + N     
Sbjct: 556 VEDAMSLVDVMGKFDAKP-TVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVT-- 612

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            +A I    R G++  A+ +      EG     + +  L++AYG  G    A  V   M 
Sbjct: 613 YTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMF 672

Query: 256 RYNLKPNLVTYNA-----VIDACGKGGV--------------------DFKHVVEIFDDM 290
               +P+  TY+      + +   K G+                    DF+ +  +F+ M
Sbjct: 673 DTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKM 732

Query: 291 LRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           +  G  P+  T++ L+  +C    L  A R LFN M   GI      +N+LL + CK   
Sbjct: 733 VEQGCVPNVNTYSKLIKGLCKVEHLSLAFR-LFNHMKESGISPSENIHNSLLSSCCKLGM 791

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
            + A  ++  M   N   ++ +Y  ++ G  + G  + A  +F  +   G   D V +  
Sbjct: 792 HEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKV 851

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           +L    + G  +E   +   ME +G R  + T+  L
Sbjct: 852 LLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/565 (25%), Positives = 263/565 (46%), Gaps = 41/565 (7%)

Query: 120 RHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLC--GADDYTFLLRELGNRGEWSKAIQ 177
           R+ V     +H +    R D ++ D+  K +   C      YT L++ L      S+A+ 
Sbjct: 286 RNEVAYTHLIHGLCVERRIDEAM-DLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALN 344

Query: 178 CFAFAVKREERKNDQGKL--ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALI 235
                VK  E K  +  +   + +I  L    K++ A+ +    L +G    V  ++ALI
Sbjct: 345 ----LVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALI 400

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV 295
           + Y + G  ++A+ V   M+  NL+PN  TYN +I    K  V     + + + ML   V
Sbjct: 401 NGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNV--HKAMGVLNKMLERKV 458

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
            PD +T+NSL+    R G +++A  L + M  RG+  D +TY +++D++CK  +++ A +
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACD 518

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           +   +  K++ PNVV Y+ +IDGY KAG++++A  M  +M       + +++N ++    
Sbjct: 519 LFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
             G+ +EA L+ ++M    ++    T   L+    K G +D   R F+QM +    P+  
Sbjct: 579 TDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAH 638

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY+T I  Y + G  ++A  +  + K+ G+  D+  YS+LI      G   SA  +L  M
Sbjct: 639 TYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRM 698

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK-ESANLDAMCSQDDKDVQEA 594
              G  P+  T+ S+I               +E   GK K     +  M +  + D+   
Sbjct: 699 HDTGCEPSQHTFLSLIKHL------------LEMKYGKVKGGEPGVCVMSNMMEFDI--- 743

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKM-HKLKIKPNVV 646
                 ++++  ++V        K        +C +G       VF  M  K  I P+ +
Sbjct: 744 ------VVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSEL 797

Query: 647 TFSAILNACSRCNSFEDASMLLEEL 671
            F+A+L+ C +     +A+ +++++
Sbjct: 798 VFNALLSCCCKLEKHNEAAKVVDDM 822



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 164/666 (24%), Positives = 292/666 (43%), Gaps = 94/666 (14%)

Query: 55  LSPSPRNAPKPAATSTTVAPNPKPFHSLSP-----LPSSKSELAPDFSGRRSTRFVSKMH 109
           +SP  RN P+  +  T+V P+ + F  LS       PS KS +        S+ F   + 
Sbjct: 45  VSPLIRNLPEDESDPTSV-PH-RLFSILSKPNWHKCPSLKSMVPAISPSHVSSLFSLDLD 102

Query: 110 FGRPKIAMSTRHSVVAEEALHH-VTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGN 168
              PK A++  H +       H V ++A    SL  +L        G     F +R L  
Sbjct: 103 ---PKTALNFSHWISQNPRYKHSVYSYA----SLLTLLINN-----GYVGVVFKIRLLMI 150

Query: 169 RGEWSKAIQCFAFAVKREERKNDQGKLA--------SAMISILGRLGKVDLAKNIFETAL 220
           +   S A   F   + R+  K++  +L         + +++ L R G VD  K ++   L
Sbjct: 151 KSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEML 210

Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI---------- 270
            +     +Y ++ +++ Y + G  +EA    + +    L P+  TY ++I          
Sbjct: 211 EDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLD 270

Query: 271 -----------DACGKGGVDFKHVV-------------EIFDDMLRNGVQPDRITFNSLL 306
                        C +  V + H++             ++F  M  +   P   T+  L+
Sbjct: 271 SAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLI 330

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
                      A NL  EM  +GI  +I TY  L+D++C   +++ A E++ +M  K + 
Sbjct: 331 KALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLM 390

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           PNV+TY+ +I+GY K G ++DAL++   M+   +  +  +YN ++  Y K     +A+ V
Sbjct: 391 PNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGV 449

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
             +M    +  D VTYN+L+ G  + G +D   R+   M    + P+  TY+++ID   K
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCK 509

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
               +EA  +F   +Q  +  +VV+Y+ALID  CK G V  A  +L++M  +   PN +T
Sbjct: 510 SKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLT 569

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG 606
           +N++I          CT        GK KE+  L+    +   D+Q    TD  +I    
Sbjct: 570 FNALIHGL-------CTD-------GKLKEATLLEEKMVK--IDLQPTVSTDTILIH--- 610

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
           +L+ +    G  ++  R+        FQ+M     KP+  T++  +    R    +DA  
Sbjct: 611 RLLKD----GDFDHAYRR--------FQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAED 658

Query: 667 LLEELR 672
           ++ +++
Sbjct: 659 MVAKMK 664



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 209/442 (47%), Gaps = 53/442 (11%)

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           I  YNTLL+++ +   +D   ++  EM    + PN+ TY+ M++GY K G +++A    S
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS 242

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            +   G+  D  +Y +++  Y +    + A  V KEM   G R++ V Y  L+ G   + 
Sbjct: 243 MIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVER 302

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           + DE   +F +MK D   P + TY+ LI          EA+ + +E ++ G+K ++  Y+
Sbjct: 303 RIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYT 362

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            LID+LC    +E A  LL +M ++G+ PNV+TYN++I+ + +    E  +D VE     
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVE----- 417

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
             ES NL           +   RT N++IK +                C++ +   +GV 
Sbjct: 418 LMESRNL-----------RPNTRTYNELIKGY----------------CKRNVHKAMGVL 450

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVY-GVAHGLLMG 688
            KM + K+ P+VVT++++++   R  +F+ A  LL  +     + D   Y  +   L   
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKS 510

Query: 689 YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENV 748
            R     +A  LFD ++  D       Y AL D     G+   A L++         E +
Sbjct: 511 KRVE---EACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLML---------EKM 558

Query: 749 WSESCLDLHLMSSGAARAMVHA 770
            S++CL     +S    A++H 
Sbjct: 559 LSKNCLP----NSLTFNALIHG 576



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/413 (23%), Positives = 175/413 (42%), Gaps = 59/413 (14%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G  D A  +     + G     + ++++I +  +S   +EA  +F+S+++ ++ PN+V
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVV 533

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
            Y A+ID  C  G V+  H+  + + ML     P+ +TFN+L+  +C+ G L EA   L 
Sbjct: 534 MYTALIDGYCKAGKVNEAHL--MLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATL-LE 590

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            +MV   +   + T   L+  + K    D A+    +M +    P+  TY+T I  Y + 
Sbjct: 591 EKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCRE 650

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG-------- 434
           GRL DA +M ++MK  G+  D  +Y++++  Y  LGR   A +V K M  +G        
Sbjct: 651 GRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTF 710

Query: 435 ---------------------------------------------IRKDAVTYNALLGGY 449
                                                        +  +A +Y  L+ G 
Sbjct: 711 LSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGI 770

Query: 450 GKQGKYDEVRRMFEQMK-ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
            + G      ++F+ M+  + +SP+ L ++ L+    K   + EA ++  +    G    
Sbjct: 771 CEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQ 830

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           +     LI  L K G  E   S+   + + G   + + +  IID  G+    E
Sbjct: 831 LESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVE 883



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 127/308 (41%), Gaps = 22/308 (7%)

Query: 160 TFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETA 219
           T L+  L   G++  A + F   +    + +      +  I    R G++  A+++    
Sbjct: 606 TILIHRLLKDGDFDHAYRRFQQMLSSGTKPD--AHTYTTFIQTYCREGRLQDAEDMVAKM 663

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC------ 273
              G    ++ +S+LI  YG  G    A  V   M     +P+  T+ ++I         
Sbjct: 664 KENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYG 723

Query: 274 ----GKGGV-------DFKHVVEIFDDMLRNGVQPDRITFNSL-LAVCSRGGLWEAARNL 321
               G+ GV       +F  VVE+ + M+ +GV P+  ++  L L +C  G L   A  +
Sbjct: 724 KVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNL-RVAEKV 782

Query: 322 FNEMVHR-GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           F+ M  + GI      +N LL   CK  + + A +++ +M      P + +   +I    
Sbjct: 783 FDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLY 842

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K G  +   ++F  +   G   D +++  ++    K G  E    +   ME +G    + 
Sbjct: 843 KKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQ 902

Query: 441 TYNALLGG 448
           TY+ L+ G
Sbjct: 903 TYSLLIEG 910


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 199/433 (45%), Gaps = 73/433 (16%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MIS L R G V+ A    E  ++ G     + + AL++   + G  +EA ++ + M  
Sbjct: 284 NVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSC 343

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             LKPN+V Y  ++D   K G       +I ++M+  GVQP++I +++L+  +C  G L 
Sbjct: 344 SGLKPNVVVYATLVDGFMKEG-KAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLG 402

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            A++ L NEM+  G   D FTY+ L+    +    D AFE++ EM    I PN  TY  M
Sbjct: 403 RASK-LLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIM 461

Query: 376 IDGYAKAGRLDDALNMFSEMKFLG--------------------IGL------------- 402
           I+G  + G   +A N+  EM   G                    I L             
Sbjct: 462 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANV 521

Query: 403 --DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D   YN+++   + +GR EEA     +++  G+  D  TY+ L+ GY K    ++  +
Sbjct: 522 LPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQ 581

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE---------------------------- 492
           + +QM    + PN  TY+ L++ Y K   +++                            
Sbjct: 582 LLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLS 641

Query: 493 -------AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
                  A  +  E ++ GL  D+ +YS+LI  LCK   +E AV LLDEM KEG+ P +V
Sbjct: 642 RSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIV 701

Query: 546 TYNSIIDAFGRSA 558
            YN++ID F RS 
Sbjct: 702 CYNALIDGFCRSG 714



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 203/432 (46%), Gaps = 36/432 (8%)

Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
           M+   + P++ TY+  ++A  K   DF    ++F++M R     + +T+N +++   R G
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKAR-DFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 294

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             E A     EMV  G+  D FTY  L++ +CKG ++  A  ++ EM    + PNVV Y+
Sbjct: 295 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYA 354

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           T++DG+ K G+  +A ++ +EM   G+  +++ Y+ ++    K+G+   A  +  EM   
Sbjct: 355 TLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKV 414

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G R D  TY+ L+ G+ +    D    +  +M+   + PN  TY  +I+   + G  KEA
Sbjct: 415 GHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEA 474

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             +  E    GLK +  +Y+ LI    K G +  A   L+ MTK  + P++  YNS+I  
Sbjct: 475 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKG 534

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
                            +G+ +E+    A        VQ+ G   ++    +  L+    
Sbjct: 535 LST--------------VGRIEEAEEYYA-------QVQKRGLVPDEF--TYSGLI---H 568

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL-- 671
           G  K  N  + + L      Q+M    +KPN  T++ +L    + N  E  S +L+ +  
Sbjct: 569 GYCKTRNLEKADQL-----LQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLG 623

Query: 672 --RLFDNQVYGV 681
                DN +YG+
Sbjct: 624 SGDKPDNHIYGI 635



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 122/508 (24%), Positives = 226/508 (44%), Gaps = 65/508 (12%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           A+++ L + G++  AK + +     G    V  ++ L+  + + G   EA  + N M   
Sbjct: 320 ALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISA 379

Query: 258 NLKPNLVTYNAVIDACGKGGV-----------------------------DFKH-----V 283
            ++PN + Y+ +I    K G                               F+H      
Sbjct: 380 GVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGA 439

Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
            E+ ++M  +G+ P+  T+  ++    + G  + A NL  EM+  G+  + F Y  L+  
Sbjct: 440 FELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIG 499

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
             K   + LA E +  M   N+ P++  Y+++I G +  GR+++A   +++++  G+  D
Sbjct: 500 HSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPD 559

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +Y+ ++  Y K    E+A  + ++M +SG++ +A TY  LL GY K   +++V  + +
Sbjct: 560 EFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQ 619

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
            M      P+   Y  +I   S+    + A  +  E ++ GL  D+ +YS+LI  LCK  
Sbjct: 620 SMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMA 679

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
            +E AV LLDEM KEG+ P +V YN++ID F RS            D+ + +     D++
Sbjct: 680 DMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSG-----------DISRARNV--FDSI 726

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
            ++        G   N +   +  L+      G        +I     +++ M    I P
Sbjct: 727 LAK--------GLLPNCV--TYTALIDGNCKNG--------DITDAFDLYKDMLDRGIAP 768

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEEL 671
           +   ++ +   CS     E A  L EE+
Sbjct: 769 DAFVYNVLATGCSDAADLEQALFLTEEM 796



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 212/490 (43%), Gaps = 72/490 (14%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    VY +S  + A+ ++     A  VF  M+R +   N VTYN +I    + G     
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA---- 295

Query: 283 VVEIF---DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
           V E F   ++M+  G+ PD  T+ +L+    +GG  + A+ L +EM   G+  ++  Y T
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT 355

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL-------------- 385
           L+D   K  +   AF+I+ EM +  + PN + Y  +I G  K G+L              
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415

Query: 386 ---------------------DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
                                D A  + +EM+  GI  +  +Y  +++   + G  +EA 
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            + +EM S G++ +A  Y  L+ G+ K+G         E M    V P+L  Y++LI   
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
           S  G  +EA + + + ++ GL  D   YS LI   CK   +E A  LL +M   G++PN 
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNA 595

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD--------VQEAGR 596
            TY  +++ + +S   E             K S+ L +M    DK         ++   R
Sbjct: 596 DTYTDLLEGYFKSNDHE-------------KVSSILQSMLGSGDKPDNHIYGIVIRNLSR 642

Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEI--LC-------ILGVFQKMHKLKIKPNVVT 647
           ++N  +        EK G     +     I  LC        +G+  +M K  ++P +V 
Sbjct: 643 SENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVC 702

Query: 648 FSAILNACSR 657
           ++A+++   R
Sbjct: 703 YNALIDGFCR 712



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 117/214 (54%)

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N LL  + +   M+L +++   M    I P+V TYST ++ + KA   D A  +F EM+ 
Sbjct: 214 NGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRR 273

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
               ++ V+YN ++S   + G  EEA    +EM   G+  DA TY AL+ G  K G+  E
Sbjct: 274 RDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKE 333

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            + + ++M    + PN++ Y+TL+D + K G   EA  I  E   AG++ + ++Y  LI 
Sbjct: 334 AKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIR 393

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            LCK G +  A  LL+EM K G RP+  TY+ ++
Sbjct: 394 GLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLM 427



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 180/413 (43%), Gaps = 36/413 (8%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI+ L + G+   A N+ E  ++EG     + ++ LI  + + G+   A     +M + N
Sbjct: 461 MINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKAN 520

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           + P+L  YN++I      G   +   E +  + + G+ PD  T++ L+    +    E A
Sbjct: 521 VLPDLFCYNSLIKGLSTVG-RIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKA 579

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L  +M++ G+  +  TY  LL+   K    +    I+  M      P+   Y  +I  
Sbjct: 580 DQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRN 639

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
            +++  ++ A  + +E++  G+  D   Y++++S   K+   E+A+ +  EM   G+   
Sbjct: 640 LSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPG 699

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            V YNAL+ G+ + G     R +F+ + A  + PN +TY+ LID   K G   +A  +++
Sbjct: 700 IVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYK 759

Query: 499 EFKQAGLKAD----------------------------------VVLYSALIDALCKNGL 524
           +    G+  D                                  V L+S L+   CK G 
Sbjct: 760 DMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGR 819

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
           ++    LL  M    I PN  T  ++I  FG++    C    V  +L ++K S
Sbjct: 820 LQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKL-CEAHRVFAELQQKKAS 871



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 5/220 (2%)

Query: 180 AFAVKREERKN---DQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALIS 236
           AF V  E  KN       + S++IS L ++  ++ A  + +    EG    +  ++ALI 
Sbjct: 649 AFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALID 708

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQ 296
            + RSG    A +VF+S+    L PN VTY A+ID   K G D     +++ DML  G+ 
Sbjct: 709 GFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNG-DITDAFDLYKDMLDRGIA 767

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           PD   +N L   CS     E A  L  EM +RG    +  ++TL+   CK  ++    ++
Sbjct: 768 PDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAH-VSLFSTLVRGFCKRGRLQETEKL 826

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           +  M  + I PN  T   +I  + KAG+L +A  +F+E++
Sbjct: 827 LHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQ 866



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 141/309 (45%), Gaps = 18/309 (5%)

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            ++D Y K G +  A  +   M  LG+   R   N +L    +    E    +   ME +
Sbjct: 180 VLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGA 239

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI  D  TY+  L  + K   +D  +++FE+M+    + N +TY+ +I    + G  +EA
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 299

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
                E    GL  D   Y AL++ LCK G ++ A +LLDEM+  G++PNVV Y +++D 
Sbjct: 300 FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359

Query: 554 FGRSATTECTVDDVERDL--GKQKESANLDAMCSQDDKDVQEAGRTD---NQIIKVFGQ- 607
           F +        D +   +  G Q      D +     K + + GR     N++IKV  + 
Sbjct: 360 FMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCK-IGQLGRASKLLNEMIKVGHRP 418

Query: 608 --LVAEKAGQGKKENRCRQEILCILGVFQKMHKLK---IKPNVVTFSAILNACSRCNSFE 662
                    QG  ++  +       G F+ +++++   I PN  T+  ++N   +    +
Sbjct: 419 DTFTYHPLMQGHFQHYDKD------GAFELLNEMRNSGILPNAYTYGIMINGLCQNGESK 472

Query: 663 DASMLLEEL 671
           +A  LLEE+
Sbjct: 473 EAGNLLEEM 481



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 105/214 (49%)

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           + L+D   K   +  A +++  M    ++P     + ++    +A  ++    +   M+ 
Sbjct: 179 DVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEG 238

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            GI  D  +Y+T L  + K   F+ A  V +EM       + VTYN ++ G  + G  +E
Sbjct: 239 AGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 298

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
                E+M    +SP+  TY  L++   KGG  KEA  +  E   +GLK +VV+Y+ L+D
Sbjct: 299 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVD 358

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
              K G    A  +L+EM   G++PN + Y+++I
Sbjct: 359 GFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLI 392



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 128/277 (46%), Gaps = 20/277 (7%)

Query: 188 RKNDQGKLASAMISILG------------------RLGKVDLAKNIFETALNEGYGNTVY 229
           + ND  K++S + S+LG                  R   +++A  +       G    ++
Sbjct: 607 KSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 666

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            +S+LIS   +    ++A+ + + M +  L+P +V YNA+ID   + G D      +FD 
Sbjct: 667 IYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSG-DISRARNVFDS 725

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           +L  G+ P+ +T+ +L+    + G    A +L+ +M+ RGI  D F YN L       A 
Sbjct: 726 ILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAAD 785

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++ A  +  EM  +  + +V  +ST++ G+ K GRL +   +   M    I  +  +   
Sbjct: 786 LEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVEN 844

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
           V++ + K G+  EA  V  E++     + +    +LL
Sbjct: 845 VITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLL 881


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 144/568 (25%), Positives = 252/568 (44%), Gaps = 65/568 (11%)

Query: 200 ISILGRLGKVDL--AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           I + G L K  L   K I    + EG   +   F++L+ AY +S     A  +   M++ 
Sbjct: 348 ILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKC 407

Query: 258 NLKPNLVTYNAVIDACGKGG-----VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
             KP  V YN +I +   GG     V F+   + +++ML  G   +++   S        
Sbjct: 408 ECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF 467

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G +E A  + +EM+  G   D  TY+ ++  +C  ++++ AF +  EM    + P+V TY
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +ID ++KAG +  A N   EM   G     V+Y T++  Y K  +   A  + + M +
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD----------------CVSPNLLT 476
            G   + +TY AL+ GY K G  ++  +++ +M+ D                   PN++T
Sbjct: 588 KGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVT 647

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y  L+D   K    K+A  +       G + + ++Y ALID  CK   ++ A  +  +M 
Sbjct: 648 YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMV 707

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN----------LDAMCSQ 586
           + G  PNV TY+S+ID   +       +D V + L K  E++           +D +   
Sbjct: 708 EHGYNPNVYTYSSLIDRLFKDK----RLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKV 763

Query: 587 DDKD--------VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
              D        ++E G   N +       + +  G+  K ++C       L +F++M  
Sbjct: 764 AKTDEAYKLMLMMEEKGCKPNVVTYT---AMIDGFGKAGKVDKC-------LELFREMGS 813

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH-----GLLMGYRDNI 693
               PN VT++ ++N C      ++A  LLEE++    Q Y   H      ++ GY+   
Sbjct: 814 KGCAPNFVTYTVLINHCCATGHLDEAYALLEEMK----QTYWPKHVSSYCKVIEGYKRE- 868

Query: 694 WVQALSLFDEVKLMDSSTASAFYNALTD 721
           ++ +L L +EV+   S+     Y  L D
Sbjct: 869 FILSLGLLEEVEKNGSAPIILLYKVLID 896



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 180/379 (47%), Gaps = 23/379 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L    +V+ A  +F+     G    VY ++ LI  + ++G  ++A +  + M R
Sbjct: 493 SEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVR 552

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +P +VTY  +I A  K         E+F+ M+  G  P+ IT+ +L+    + G  E
Sbjct: 553 DGCEPTVVTYTTLIHAYLKAK-KVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIE 611

Query: 317 AARNLFNEMVHRGIDQDI-------------------FTYNTLLDAICKGAQMDLAFEIM 357
            A  ++  M  RG D DI                    TY  L+D +CK  ++  A +++
Sbjct: 612 KACQIYARM--RG-DADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 668

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
             M      PN + Y  +IDG+ KA +LD+A  +F +M   G   +  +Y++++    K 
Sbjct: 669 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 728

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
            R +  L V  +M  +    + V Y  ++ G  K  K DE  ++   M+     PN++TY
Sbjct: 729 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 788

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           + +ID + K G   + +++FRE    G   + V Y+ LI+  C  G ++ A +LL+EM +
Sbjct: 789 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 848

Query: 538 EGIRPNVVTYNSIIDAFGR 556
                +V +Y  +I+ + R
Sbjct: 849 TYWPKHVSSYCKVIEGYKR 867



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 179/405 (44%), Gaps = 54/405 (13%)

Query: 159 YTFLLRELGNRGEWSKAIQCFA--------------FAVKREERKNDQGKLASAMISILG 204
           YT L+      G   KA Q +A              F +K    +        A++  L 
Sbjct: 597 YTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLC 656

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           +  KV  A+++ ET   +G       + ALI  + ++    EA  VF+ M  +   PN+ 
Sbjct: 657 KAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVY 716

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TY+++ID   K       V+++   ML N   P                           
Sbjct: 717 TYSSLIDRLFKDK-RLDLVLKVLSKMLENSCAP--------------------------- 748

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
                   +I  Y  ++D + K A+ D A+++M  M  K   PNVVTY+ MIDG+ KAG+
Sbjct: 749 --------NIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGK 800

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +D  L +F EM   G   + V+Y  +++     G  +EA  + +EM+ +   K   +Y  
Sbjct: 801 VDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCK 860

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           ++ GY ++  +     + E+++ +  +P +L Y  LID + K G  + A+++ +E   A 
Sbjct: 861 VIEGYKRE--FILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISAS 918

Query: 505 LK--ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
           +   A   LY++LI +      +  A  L  +M ++G+ P++ T+
Sbjct: 919 MSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTF 963



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 129/305 (42%), Gaps = 21/305 (6%)

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV----CSRGGLWEAARN 320
            Y A++D   +G  D      + ++ LR     D+     LL V    C R GLW  A  
Sbjct: 173 VYIALLDVFERGSYD-----RVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALE 227

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
               +   G      TYN L+    +  ++D A  +  EM    +S +  T         
Sbjct: 228 ELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALC 287

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K G+  +AL++  +  F+    + + YN ++S   +   FEEA+     M S+    +  
Sbjct: 288 KVGKWREALSLIEKEDFVP---NTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQ 344

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY  LL G   + +    +R+   M A+   P+   +++L+  Y K   +  A ++ ++ 
Sbjct: 345 TYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKM 404

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSL------LDEMTKEGI---RPNVVTYNSII 551
           ++   K   V+Y+ LI ++C  G +   V+        +EM   G    + NVV++   +
Sbjct: 405 EKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCL 464

Query: 552 DAFGR 556
             FG+
Sbjct: 465 CGFGK 469



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 86/421 (20%), Positives = 159/421 (37%), Gaps = 31/421 (7%)

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI----TFNSLLAVCSRGGLWEAARNLFNE 324
           ++DA       F     I     R  + PD +    +F     +C +  LW A R +   
Sbjct: 110 ILDAVRNCDDGFGEKTHIVLRQFRQKLNPDLVVEILSFLKSPELCVKFFLW-AGRQI--- 165

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
               G D     Y  LLD   +G+   +  E + E+   +        + +I    + G 
Sbjct: 166 ----GYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGL 221

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
            + AL     +K  G    R++YN ++ ++ +  + + A LV +EM   G+  D  T   
Sbjct: 222 WNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGF 281

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
                 K GK+ E   + E  K D V PN + Y+ +I    +   ++EAM      +   
Sbjct: 282 FAQALCKVGKWREALSLIE--KEDFV-PNTILYNKMISGLCEASFFEEAMDFLNRMRSTS 338

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT- 563
              +V  Y  L+        +     +L  M  EG  P+   +NS++ A+ +S       
Sbjct: 339 CIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAY 398

Query: 564 -----VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
                ++  E   G    +  + ++CS  +        T     K + ++++      K 
Sbjct: 399 KLLKKMEKCECKPGYVVYNILIGSICSGGE---LPGPVTFELAEKAYNEMLSAGTVLNKV 455

Query: 619 ENRCRQEILCILGVFQKMHKL-------KIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                   LC  G F+K +K+          P+  T+S ++      +  E+A  L +E+
Sbjct: 456 NVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEM 515

Query: 672 R 672
           +
Sbjct: 516 K 516



 Score = 40.0 bits (92), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 16/161 (9%)

Query: 180 AFAVKREERKNDQGKLASAMISIL-GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
           A+A+  E ++    K  S+   ++ G   +  L+  + E     G    +  +  LI  +
Sbjct: 839 AYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNF 898

Query: 239 GRSGYCQ-------EAISVFNSMK-RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
            ++G  +       E IS   SM  + NL  +L+   +     G       H  E+F DM
Sbjct: 899 VKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIG-------HAFELFYDM 951

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
           +R+GV PD  TF  LL    R   WE A  L + +    I+
Sbjct: 952 IRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDIN 992


>gi|297796623|ref|XP_002866196.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312031|gb|EFH42455.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 821

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 204/356 (57%), Gaps = 9/356 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A++S L +LGKVD  +++     +EG+      +S  I  Y + G   +A+     M  
Sbjct: 62  TAVVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDRKMVE 121

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             +  ++V+Y+ +ID   + G + +  + +   M++ G++P+ IT+ +++  +C +G L 
Sbjct: 122 KGINRDVVSYSILIDGLSREG-NIEKALGLLGKMIKEGIEPNLITYTAIIRGLCKKGKL- 179

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  LF+ ++  GI+ D F Y TL+D ICK   ++ AF ++ +M  + I P+++TY+T+
Sbjct: 180 EDAFVLFDRILSFGIEVDEFLYVTLIDGICKKGNLNRAFSMLGDMEQRGIQPSILTYNTV 239

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+G  KAGR+ +A ++       G+  D ++Y+T+L  Y K+   +  L + +    + I
Sbjct: 240 INGLCKAGRVSEADDISK-----GVVGDVITYSTLLDSYVKVENIDAVLEIRRRFVEAKI 294

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D V  N LL  +   G Y E   ++  M    ++P+  TY+T+I+ Y K G  ++A++
Sbjct: 295 PMDLVMCNILLKAFLLVGAYGEADALYRAMPEMGLTPDTATYATMIEGYCKTGQIEDALE 354

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +F E +++ + A  V Y+ +IDALCK G++E+A+ +L E+ ++G+  ++ T  +++
Sbjct: 355 MFNELRKSSVSA-AVCYNHIIDALCKKGMLETAMEVLIELWEKGLYLDIHTSRTLL 409



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 184/408 (45%), Gaps = 80/408 (19%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           ++SA+IS   ++GK +LA   FETA++ G                               
Sbjct: 24  VSSAVISGFCKIGKPELALGFFETAVDSGV------------------------------ 53

Query: 255 KRYNLKPNLVTYNAVIDA-CGKGGVD-FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
               L PNLVTY AV+ A C  G VD  + +V   +D    G + D + +++ +    +G
Sbjct: 54  ----LVPNLVTYTAVVSALCQLGKVDEVRDLVRRLED---EGFEFDCVFYSNWIHGYFKG 106

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G    A     +MV +GI++D+ +Y+ L+D + +   ++ A  ++ +M  + I PN++TY
Sbjct: 107 GALVDALMQDRKMVEKGINRDVVSYSILIDGLSREGNIEKALGLLGKMIKEGIEPNLITY 166

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +I G  K G+L+DA  +F  +   GI +D   Y T++    K G    A  +  +ME 
Sbjct: 167 TAIIRGLCKKGKLEDAFVLFDRILSFGIEVDEFLYVTLIDGICKKGNLNRAFSMLGDMEQ 226

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK------ 486
            GI+   +TYN ++ G  K G+  E   + + +  D     ++TYSTL+D Y K      
Sbjct: 227 RGIQPSILTYNTVINGLCKAGRVSEADDISKGVVGD-----VITYSTLLDSYVKVENIDA 281

Query: 487 -----------------------------GGLYKEAMQIFREFKQAGLKADVVLYSALID 517
                                         G Y EA  ++R   + GL  D   Y+ +I+
Sbjct: 282 VLEIRRRFVEAKIPMDLVMCNILLKAFLLVGAYGEADALYRAMPEMGLTPDTATYATMIE 341

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
             CK G +E A+ + +E+ K  +    V YN IIDA  +    E  ++
Sbjct: 342 GYCKTGQIEDALEMFNELRKSSVSA-AVCYNHIIDALCKKGMLETAME 388



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 169/356 (47%), Gaps = 32/356 (8%)

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIM-AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
           D F  + ++   CK  + +LA       + +  + PN+VTY+ ++    + G++D+  ++
Sbjct: 21  DNFVSSAVISGFCKIGKPELALGFFETAVDSGVLVPNLVTYTAVVSALCQLGKVDEVRDL 80

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
              ++  G   D V Y+  +  Y K G   +AL+  ++M   GI +D V+Y+ L+ G  +
Sbjct: 81  VRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDRKMVEKGINRDVVSYSILIDGLSR 140

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
           +G  ++   +  +M  + + PNL+TY+ +I    K G  ++A  +F      G++ D  L
Sbjct: 141 EGNIEKALGLLGKMIKEGIEPNLITYTAIIRGLCKKGKLEDAFVLFDRILSFGIEVDEFL 200

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD- 570
           Y  LID +CK G +  A S+L +M + GI+P+++TYN++I+   ++       DD+ +  
Sbjct: 201 YVTLIDGICKKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCKAGRVS-EADDISKGV 259

Query: 571 ----------LGKQKESANLDAMCSQDDKDVQEAGRTD----NQIIKVFGQLVAEKAGQG 616
                     L    +  N+DA+     + V+     D    N ++K F  L+    G+ 
Sbjct: 260 VGDVITYSTLLDSYVKVENIDAVLEIRRRFVEAKIPMDLVMCNILLKAF--LLVGAYGEA 317

Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                          +++ M ++ + P+  T++ ++    +    EDA  +  ELR
Sbjct: 318 D-------------ALYRAMPEMGLTPDTATYATMIEGYCKTGQIEDALEMFNELR 360



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 134/567 (23%), Positives = 239/567 (42%), Gaps = 77/567 (13%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L   G   KA+      +K     N      +A+I  L + GK++ A  +F+ 
Sbjct: 131 YSILIDGLSREGNIEKALGLLGKMIKEGIEPNLIT--YTAIIRGLCKKGKLEDAFVLFDR 188

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            L+ G     + +  LI    + G    A S+   M++  ++P+++TYN VI+   K G 
Sbjct: 189 ILSFGIEVDEFLYVTLIDGICKKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCKAG- 247

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
               V E   D +  GV  D IT+++LL    +    +A   +    V   I  D+   N
Sbjct: 248 ---RVSEA--DDISKGVVGDVITYSTLLDSYVKVENIDAVLEIRRRFVEAKIPMDLVMCN 302

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            LL A         A  +   MP   ++P+  TY+TMI+GY K G+++DAL MF+E++  
Sbjct: 303 ILLKAFLLVGAYGEADALYRAMPEMGLTPDTATYATMIEGYCKTGQIEDALEMFNELRKS 362

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL----GGYGKQGK 454
            +    V YN ++    K G  E A+ V  E+   G+  D  T   LL       G +G 
Sbjct: 363 SVS-AAVCYNHIIDALCKKGMLETAMEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGI 421

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR---------EFKQAGL 505
            D V ++ EQ+ +D +   +L  + L+      G ++ A++++           F    L
Sbjct: 422 LDLVYKV-EQLNSD-ICLGMLNDAILL--LCNRGSFEAAIEVYMIMMRKDLTVTFPSTIL 477

Query: 506 KA-------------------------DVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           K                          DV+ Y+ +I+ LCK G +  A+ L +    +G+
Sbjct: 478 KTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALDLCNFAKSKGV 537

Query: 541 RPNVVTYNSIIDAFGRSATTECTVD-----DVERDLGKQKESAN----LDAMCSQ----D 587
             N +TYNS+I+   +     C V+     D   ++G           +D +C +    D
Sbjct: 538 TLNTITYNSLINGLCQQG---CLVEALRLFDSLDNIGLVPSEVTYGILIDNLCKEGLFLD 594

Query: 588 DKDVQEAGRTDNQI--IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
            + + ++  +   +  I ++  +V      G+ E+  R        V  +    ++KP+ 
Sbjct: 595 AEKLLDSMVSKGLVPNILIYNSIVDGYCKLGQTEDAMR--------VLSRKMMGRVKPDA 646

Query: 646 VTFSAILNACSRCNSFEDASMLLEELR 672
            T S+I+    +    E+A  +  E +
Sbjct: 647 FTVSSIIKGYCKKGDMEEALRVFAEFK 673



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 171/375 (45%), Gaps = 71/375 (18%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD--FKHVVEI 286
            ++ +I  Y ++G  ++A+ +FN +++ ++    V YN +IDA C KG ++   + ++E+
Sbjct: 335 TYATMIEGYCKTGQIEDALEMFNELRKSSVSAA-VCYNHIIDALCKKGMLETAMEVLIEL 393

Query: 287 FDDMLRNGVQPDRITFNSL--------------------------------LAVCSRGGL 314
           ++  L   +   R   +S+                                L +C+RG  
Sbjct: 394 WEKGLYLDIHTSRTLLHSIHANGGDKGILDLVYKVEQLNSDICLGMLNDAILLLCNRGS- 452

Query: 315 WEAARNLFNEMVH-------------------RGID---------------QDIFTYNTL 340
           +EAA  ++  M+                    R +D                D+  Y  +
Sbjct: 453 FEAAIEVYMIMMRKDLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTII 512

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           ++ +CK   +  A ++     +K ++ N +TY+++I+G  + G L +AL +F  +  +G+
Sbjct: 513 INGLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLINGLCQQGCLVEALRLFDSLDNIGL 572

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
               V+Y  ++    K G F +A  +   M S G+  + + YN+++ GY K G+ ++  R
Sbjct: 573 VPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNILIYNSIVDGYCKLGQTEDAMR 632

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +  +     V P+  T S++I  Y K G  +EA+++F EFK+  + AD + +  LI   C
Sbjct: 633 VLSRKMMGRVKPDAFTVSSIIKGYCKKGDMEEALRVFAEFKEENISADFLGFLFLIKCFC 692

Query: 521 KNGLVESAVSLLDEM 535
             G +E A  LL EM
Sbjct: 693 TKGRMEEARGLLREM 707



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 123/250 (49%), Gaps = 11/250 (4%)

Query: 298 DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
           D I +  ++    + G    A +L N    +G+  +  TYN+L++ +C+   +  A  + 
Sbjct: 505 DVIDYTIIINGLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLINGLCQQGCLVEALRLF 564

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
             +    + P+ VTY  +ID   K G   DA  +   M   G+  + + YN+++  Y KL
Sbjct: 565 DSLDNIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNILIYNSIVDGYCKL 624

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G+ E+A+ V        ++ DA T ++++ GY K+G  +E  R+F + K + +S + L +
Sbjct: 625 GQTEDAMRVLSRKMMGRVKPDAFTVSSIIKGYCKKGDMEEALRVFAEFKEENISADFLGF 684

Query: 478 STLIDVYSKGGLYKEAMQIFREF--KQAGLKADVVLYSALIDA---------LCKNGLVE 526
             LI  +   G  +EA  + RE    ++ +K    + + L+++         LC+ G V 
Sbjct: 685 LFLIKCFCTKGRMEEARGLLREMLVSESVVKLINRVDAELVESESIRGFLVELCEQGRVP 744

Query: 527 SAVSLLDEMT 536
            A+ +LDE++
Sbjct: 745 QAIKILDEIS 754



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 33/223 (14%)

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG-LKADVVLYSAL 515
           EV  M    K +    N ++ S +I  + K G  + A+  F     +G L  ++V Y+A+
Sbjct: 6   EVLEMMTNKKVNYPFDNFVS-SAVISGFCKIGKPELALGFFETAVDSGVLVPNLVTYTAV 64

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
           + ALC+ G V+    L+  +  EG   + V Y++ I                    G  K
Sbjct: 65  VSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIH-------------------GYFK 105

Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQK 635
             A +DA+  QD K V++    D   +  +  L+   + +G  E          LG+  K
Sbjct: 106 GGALVDAL-MQDRKMVEKGINRD---VVSYSILIDGLSREGNIEKA--------LGLLGK 153

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
           M K  I+PN++T++AI+    +    EDA +L + +  F  +V
Sbjct: 154 MIKEGIEPNLITYTAIIRGLCKKGKLEDAFVLFDRILSFGIEV 196


>gi|356557985|ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 692

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 153/600 (25%), Positives = 263/600 (43%), Gaps = 90/600 (15%)

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           + N   ++V YN  +    +   DF+   ++FD+ML+ GV+PD ITF++L+   S  GL 
Sbjct: 149 KINPAKHVVLYNVTLKVL-RESRDFEGAEKLFDEMLQRGVKPDNITFSTLVNCASVSGLP 207

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  LF +M   G + D  T + ++ A  +   +D A  +     A+N S + VT+ST+
Sbjct: 208 NKAVELFEKMSGFGCEPDGITCSGMVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTL 267

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I  Y+ AG  D  L ++ EMK LG+  +  +YNT+L    +  +  +A  + KEM+S+G+
Sbjct: 268 IKMYSMAGNYDKCLEVYQEMKVLGVKPNVATYNTLLGAMLRSKKHRQAKAIHKEMKSNGV 327

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D +TY +LL  Y +    ++   ++++MK + +      Y+ L+ + +  G    A++
Sbjct: 328 SPDFITYASLLEVYTRAQCSEDALGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDRAVE 387

Query: 496 IFREFKQAG-LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           IF E K +G  + D   +S+LI    ++G V     +L+EM + G +P +    S+I  +
Sbjct: 388 IFYEMKSSGTCQPDSWTFSSLITIYSRSGKVSEVEGMLNEMIQSGFQPTIFVMTSLIRCY 447

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
           G+                                     A RTD+ ++K+F QL+    G
Sbjct: 448 GK-------------------------------------AKRTDD-VVKIFKQLL--DLG 467

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
               ++ C     C+L V  +  K                       E+   L + +   
Sbjct: 468 IVPNDHFC----CCLLNVLTQTPK-----------------------EELGKLTDCIEKA 500

Query: 675 DNQVYGVAHGLL------MGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           + ++  V   L+       G+R     + L L + +   D+       N L D+      
Sbjct: 501 NTKLGTVVRYLVEEQESDEGFRK----ETLELLNSI---DAEVKKPLCNCLIDLCVKLNV 553

Query: 729 KRGAQLVVLEGKRRQVWENVWSES----CLDLHLMSSGAARAMVHAWLLNIHSIVFEGHE 784
              A  ++  G   ++++N+ S+S     L L  +S GAA   +H W+ ++   +  G +
Sbjct: 554 PERACGLLDLGLMLEIYKNIQSKSQTQWSLHLKELSVGAAMTALHVWINDLSEALESGED 613

Query: 785 LPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLR 844
           LP LL I TG GKH     D  L    E  L  + APF  A    G F+ T      WL 
Sbjct: 614 LPPLLGINTGQGKHK--YSDKGLASVFESRLKELNAPFHEAKA--GWFLVTKAAAKLWLE 669



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 151/347 (43%), Gaps = 16/347 (4%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G   S M+    R   VD A N+++ A  E +      FS LI  Y  +G   + + V+ 
Sbjct: 226 GITCSGMVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTLIKMYSMAGNYDKCLEVYQ 285

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            MK   +KPN+ TYN ++ A  +     +    I  +M  NGV PD IT+ SLL V +R 
Sbjct: 286 EMKVLGVKPNVATYNTLLGAMLRSK-KHRQAKAIHKEMKSNGVSPDFITYASLLEVYTRA 344

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK-NISPNVVT 371
              E A  ++ EM   G+D     YN LL         D A EI  EM +     P+  T
Sbjct: 345 QCSEDALGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWT 404

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           +S++I  Y+++G++ +   M +EM   G         +++  Y K  R ++ + + K++ 
Sbjct: 405 FSSLITIYSRSGKVSEVEGMLNEMIQSGFQPTIFVMTSLIRCYGKAKRTDDVVKIFKQLL 464

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI-----DVYSK 486
             GI  +      LL    +  K +E+ ++      DC+        T++     +  S 
Sbjct: 465 DLGIVPNDHFCCCLLNVLTQTPK-EELGKL-----TDCIEKANTKLGTVVRYLVEEQESD 518

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            G  KE +++         K    L + LID   K  + E A  LLD
Sbjct: 519 EGFRKETLELLNSIDAEVKKP---LCNCLIDLCVKLNVPERACGLLD 562



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 163/357 (45%), Gaps = 6/357 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +++     G  + A  +FE     G        S ++ AY R+    +A+++++  K 
Sbjct: 195 STLVNCASVSGLPNKAVELFEKMSGFGCEPDGITCSGMVYAYARTNNVDKAVNLYDRAKA 254

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            N   + VT++ +I      G ++   +E++ +M   GV+P+  T+N+LL    R     
Sbjct: 255 ENWSLDAVTFSTLIKMYSMAG-NYDKCLEVYQEMKVLGVKPNVATYNTLLGAMLRSKKHR 313

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A+ +  EM   G+  D  TY +LL+   +    + A  +  EM    +      Y+ ++
Sbjct: 314 QAKAIHKEMKSNGVSPDFITYASLLEVYTRAQCSEDALGVYKEMKGNGMDMTADLYNKLL 373

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGL-DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
              A  G  D A+ +F EMK  G    D  +++++++IY++ G+  E   +  EM  SG 
Sbjct: 374 AMCADVGYTDRAVEIFYEMKSSGTCQPDSWTFSSLITIYSRSGKVSEVEGMLNEMIQSGF 433

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           +       +L+  YGK  + D+V ++F+Q+    + PN      L++V ++    +E  +
Sbjct: 434 QPTIFVMTSLIRCYGKAKRTDDVVKIFKQLLDLGIVPNDHFCCCLLNVLTQTP-KEELGK 492

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           +    ++A  K   V+   + +     G  +  + LL+ +  E  +P     N +ID
Sbjct: 493 LTDCIEKANTKLGTVVRYLVEEQESDEGFRKETLELLNSIDAEVKKP---LCNCLID 546


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 236/501 (47%), Gaps = 35/501 (6%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMK-RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           AF ALI A+  +G   EA+  F+ M+  +  +P    YNAV+      G      + +++
Sbjct: 141 AFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALYN 200

Query: 289 DMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            M+  G  P+R T+N L+  +C RG   +A + LF+EM+ RGI  ++ T+  LL ++C  
Sbjct: 201 RMVAAGCLPNRATYNVLIHGLCKRGTPVDALK-LFDEMISRGITPNVKTHTILLSSMCNA 259

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG---IGLDR 404
            Q+  A  ++  M  K   P+ VTY+  + G  KAGR+D+A+     ++  G   +GL  
Sbjct: 260 GQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLK- 318

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKE-MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             Y+ ++      GR+EE      E +E + +  D V Y  ++ G  + G+ ++    F+
Sbjct: 319 -GYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFD 377

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +MK    +P+   Y+TL+      G    A  +  E  +  +  D+  Y+ +I  LCK  
Sbjct: 378 EMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQ 437

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
           LV+ A+ + D M + G  P+V+TYN +ID   R+   E       R L  + E  N  ++
Sbjct: 438 LVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLE-----EARMLFYKMEVGNNPSL 492

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
             +      +  R    + K+   +   ++GQ  K  +  + I+             + P
Sbjct: 493 FLRLTLGANQV-RDSETLQKLVESMC--QSGQVLKAYKLLRGII----------DSGVVP 539

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRL----FDNQVYG-VAHGLLMGYRDNIWVQAL 698
           +VVT++ +LN   +  + + A  L  EL++     D   YG +   LL  +R N    AL
Sbjct: 540 DVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYN---DAL 596

Query: 699 SLFDEVKLMDSSTASAFYNAL 719
           +LF ++     + +   YN++
Sbjct: 597 TLFQDILHSGGTPSMPIYNSM 617



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 196/415 (47%), Gaps = 22/415 (5%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L  RG    A++ F   + R    N   K  + ++S +   G++  A+N+  +
Sbjct: 214 YNVLIHGLCKRGTPVDALKLFDEMISRGITPNV--KTHTILLSSMCNAGQLKEAENLLHS 271

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY-NLKPNLVTYNAVIDA---CG 274
             ++G       ++A +S   ++G   EAI    +++        L  Y+ +ID     G
Sbjct: 272 MEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAG 331

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           +    F+  +E+ +   +  V PD + +  ++  C+  G    A   F+EM  +G   D 
Sbjct: 332 RYEEGFQCYMEVLE---QADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDT 388

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
           F YNTLL A+C    +D A  +M+EM   N+  ++ TY+TMI G  K   +D+A+ +F  
Sbjct: 389 FCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDG 448

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME-----SSGIR--------KDAVT 441
           M  +G     ++YN ++    +  R EEA ++  +ME     S  +R        +D+ T
Sbjct: 449 MVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSET 508

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
              L+    + G+  +  ++   +    V P+++TY+TL++   K      A+++FRE +
Sbjct: 509 LQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQ 568

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             G   D + Y  LID+L +      A++L  ++   G  P++  YNS++ +  R
Sbjct: 569 VKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCR 623



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 171/421 (40%), Gaps = 87/421 (20%)

Query: 223 GYGNTVYAFSALISAYGRSG-YCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           G   T + ++A++     SG     A++++N M      PN  TYN +I    K G    
Sbjct: 170 GCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVD 229

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             +++FD+M+  G+ P+  T   LL+     G  + A NL + M  +G   D  TYN  L
Sbjct: 230 -ALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFL 288

Query: 342 DAICKGAQMDLAFE-------------------------------------IMAEMPAKN 364
             +CK  ++D A E                                      M  +   +
Sbjct: 289 SGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQAD 348

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
           +SP++V Y+ MI G A+AGR +DA   F EMK  G   D   YNT+L      G  + A 
Sbjct: 349 VSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGAR 408

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +  EM  + +  D  TY  ++ G  K+   DE  ++F+ M      P+++TY+ LID  
Sbjct: 409 SLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGL 468

Query: 485 SKGGLYKEAMQIF----------------------------------------------- 497
            +    +EA  +F                                               
Sbjct: 469 YRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKL 528

Query: 498 -REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            R    +G+  DVV Y+ L++ LCK   ++ A+ L  E+  +G   + +TY ++ID+  R
Sbjct: 529 LRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLR 588

Query: 557 S 557
           +
Sbjct: 589 A 589



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 168/389 (43%), Gaps = 39/389 (10%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR-GIDQDIFTYNTLLDA-ICKGAQMD 351
           G+QP    F +L+   +  G    A   F+ M    G     F YN +L   +  G  + 
Sbjct: 134 GLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVP 193

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
           LA  +   M A    PN  TY+ +I G  K G   DAL +F EM   GI  +  ++  +L
Sbjct: 194 LALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILL 253

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK-ADCV 470
           S     G+ +EA  +   ME  G   D VTYNA L G  K G+ DE     E ++     
Sbjct: 254 SSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTF 313

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFRE-FKQAGLKADVVLYSALIDALCKNGLVESAV 529
              L  YS LID     G Y+E  Q + E  +QA +  D+VLY+ +I    + G    A 
Sbjct: 314 VLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAF 373

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESANLDAMCSQD 587
           +  DEM ++G  P+   YN+++ A        C   D++  R L  +    N+       
Sbjct: 374 AFFDEMKEKGFTPDTFCYNTLLKAL-------CDAGDLDGARSLMSEMVRNNV------- 419

Query: 588 DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
              V +       II +  + + ++A Q                VF  M ++   P+V+T
Sbjct: 420 ---VLDIHTYTTMIIGLCKEQLVDEAMQ----------------VFDGMVEVGCHPSVMT 460

Query: 648 FSAILNACSRCNSFEDASMLLEELRLFDN 676
           ++ +++   R +  E+A ML  ++ + +N
Sbjct: 461 YNVLIDGLYRAHRLEEARMLFYKMEVGNN 489



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 98/447 (21%), Positives = 179/447 (40%), Gaps = 77/447 (17%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           G   Y+ L+  L   G + +  QC+   +++ +   D   L + MI      G+ + A  
Sbjct: 316 GLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDI-VLYTIMIRGCAEAGRTNDAFA 374

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA-VIDAC 273
            F+    +G+    + ++ L+ A   +G    A S+ + M R N+  ++ TY   +I  C
Sbjct: 375 FFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLC 434

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM-------- 325
            +  VD    +++FD M+  G  P  +T+N L+    R    E AR LF +M        
Sbjct: 435 KEQLVD--EAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSL 492

Query: 326 ----------------------------------------VHRGIDQDIFTYNTLLDAIC 345
                                                   +  G+  D+ TYNTLL+ +C
Sbjct: 493 FLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLC 552

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K   +D A  +  E+  K    + +TY T+ID   +A R +DAL +F ++   G      
Sbjct: 553 KVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMP 612

Query: 406 SYNTVLSIYAKLGRFEEA-------------LLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            YN+++    ++ +  +A             LL   E+ SS  +K             ++
Sbjct: 613 IYNSMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQDEVISSARKK------------FEE 660

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G   E  R   ++  +  S N   Y+  +    + G  ++A++IF   +++G+       
Sbjct: 661 GCLHEAVRELIKIDQEYGSVNSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACC 720

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEG 539
             L   LC  G + +AV ++    K+G
Sbjct: 721 VHLSKYLCLEGNLGAAVDVMLYTLKKG 747


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 190/364 (52%), Gaps = 3/364 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L   +IS     G +D  K +F+  L +G    V  +S L+    R G  +EA +V N+M
Sbjct: 251 LYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM 310

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
             + + P++VTY  +ID   K G    H +++ + M+  G +P  +T+N LL+   + GL
Sbjct: 311 AEHGIHPDVVTYTGLIDGLCKDG-RATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL 369

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM--PAKNISPNVVTY 372
              A  +   M+ +G   D+ TYNTL+  +C   ++D A ++   M      + PNV T+
Sbjct: 370 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 429

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +I G  K GRL  A+ +  +M   G   + V+YN +L    K G+ +EA+ + K++  
Sbjct: 430 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 489

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G   ++ TY+ L+ G+ K    +  + +F +M+   ++P L  Y+TL+    K G  ++
Sbjct: 490 LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQ 549

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A  +F+E   A  + D++ ++ +ID   K G  +    L  +M + G+RP+ +T++++I+
Sbjct: 550 AKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLIN 609

Query: 553 AFGR 556
              +
Sbjct: 610 RLSK 613



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 138/556 (24%), Positives = 245/556 (44%), Gaps = 83/556 (14%)

Query: 179 FAFAVKREERKNDQ----GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSAL 234
            AF+V R     D     G L SA+I       K  L   +    L  G+   V+  + +
Sbjct: 92  LAFSVYRRMTHVDVLPSFGSL-SALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIV 150

Query: 235 ISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA---------------------- 272
           +    R+G   EA+ +   M R ++ P++V+YN +I+                       
Sbjct: 151 LKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGC 210

Query: 273 --------------CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
                         C  G +D    +E+ + M + G   D + + +L++     G  +  
Sbjct: 211 FPNSVTCTTLMDGLCKDGRMD--EAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 268

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           + LF+EM+ +GI  ++ TY+ L+  +C+  Q   A  ++  M    I P+VVTY+ +IDG
Sbjct: 269 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 328

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K GR   A+++ + M   G     V+YN +LS   K G   +A  + + M   G + D
Sbjct: 329 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 388

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQM--KADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            VTYN L+ G   +GK DE  ++F  M    +C+ PN+ T++ LI    K G   +A++I
Sbjct: 389 VVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKI 448

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            R+  + G   ++V Y+ L+    K G ++ A+ L  ++   G  PN  TY+ +ID F +
Sbjct: 449 HRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCK 508

Query: 557 SATTECTVDDVERDLGKQKESANLD-----------AMCSQDDKD-----VQEAGRTDNQ 600
                    ++ + L  +  +  L+           ++C +   +      QE G  + +
Sbjct: 509 MRML-----NIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 563

Query: 601 I-IKVFGQLV--AEKAG--QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
             I  F  ++    KAG  Q  KE +             KM ++ ++P+ +TFS ++N  
Sbjct: 564 PDIISFNTMIDGTLKAGDFQFVKELQ------------MKMVEMGLRPDALTFSTLINRL 611

Query: 656 SRCNSFEDASMLLEEL 671
           S+    ++A   LE +
Sbjct: 612 SKLGELDEAKSALERM 627



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 208/454 (45%), Gaps = 65/454 (14%)

Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKG---GVDFK------HV------------V 284
           EA+S+F+S   +NL P+  T N ++DA  +    G+ F       HV            +
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 285 EIFDD-------------MLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGI 330
           E F D             +L+ G   +    N +L  +C  GG++EA   L  EM  + +
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAM-GLIREMGRKSV 175

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             DI +YNTL++ +CK  ++  A  ++ EM A    PN VT +T++DG  K GR+D+A+ 
Sbjct: 176 SPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAME 235

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +   MK  G   D V Y T++S +   G  +    +  EM   GI  + VTY+ L+ G  
Sbjct: 236 LLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLC 295

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           + G++ E   +   M    + P+++TY+ LID   K G    AM +     + G +   V
Sbjct: 296 RLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV 355

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y+ L+  LCK GLV  A  +L  M ++G + +VVTYN+++          C       D
Sbjct: 356 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL-------C-------D 401

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
            GK  E+  L      ++  ++    T N +I           G   KE R  + +    
Sbjct: 402 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLI-----------GGLCKEGRLTKAV---- 446

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
            + +KM K     N+VT++ +L  C +    ++A
Sbjct: 447 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEA 480



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 184/385 (47%), Gaps = 9/385 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L   G+W +A          E   +      + +I  L + G+   A ++   
Sbjct: 287 YSCLVHGLCRLGQWKEANT--VLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNL 344

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            + +G   +   ++ L+S   + G   +A  +   M     K ++VTYN ++   C KG 
Sbjct: 345 MVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGK 404

Query: 278 VDFKHVVEIFDDML--RNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDI 334
           VD    +++F+ M    N ++P+  TFN L+  +C  G L +A + +  +MV +G   ++
Sbjct: 405 VD--EALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK-IHRKMVKKGSCGNL 461

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TYN LL    K  ++  A E+  ++      PN  TYS +IDG+ K   L+ A  +F E
Sbjct: 462 VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE 521

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M+  G+      YNT+++   K G  E+A  + +EM ++    D +++N ++ G  K G 
Sbjct: 522 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 581

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
           +  V+ +  +M    + P+ LT+STLI+  SK G   EA         +G   D ++Y +
Sbjct: 582 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 641

Query: 515 LIDALCKNGLVESAVSLLDEMTKEG 539
           L+  L   G     ++LL +M  +G
Sbjct: 642 LLKGLSSKGDTTEIINLLHQMAAKG 666



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 173/364 (47%), Gaps = 5/364 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L   G  + A+      V++ E  ++     + ++S L + G V  A  I   
Sbjct: 322 YTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT--YNVLLSGLCKEGLVIDAFKILRM 379

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM--KRYNLKPNLVTYNAVIDACGKG 276
            + +G    V  ++ L+      G   EA+ +FNSM      L+PN+ T+N +I    K 
Sbjct: 380 MIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKE 439

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G      V+I   M++ G   + +T+N LL  C + G  + A  L+ +++  G   + FT
Sbjct: 440 G-RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFT 498

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y+ L+D  CK   +++A  +  EM    ++P +  Y+T++    K G L+ A ++F EM 
Sbjct: 499 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 558

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
                 D +S+NT++    K G F+    +  +M   G+R DA+T++ L+    K G+ D
Sbjct: 559 NANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELD 618

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E +   E+M A   +P+ L Y +L+   S  G   E + +  +    G   D  + S ++
Sbjct: 619 EAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTIL 678

Query: 517 DALC 520
             LC
Sbjct: 679 TCLC 682



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 147/308 (47%)

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C K    F   V +F   L   + P   T N L+   +R   +  A +++  M H  +  
Sbjct: 48  CQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLP 107

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
              + + L++      +  L F ++  +  +  + NV   + ++ G  + G + +A+ + 
Sbjct: 108 SFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLI 167

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            EM    +  D VSYNT+++   K  + +EA+ +  EME++G   ++VT   L+ G  K 
Sbjct: 168 REMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKD 227

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G+ DE   + E MK      +++ Y TLI  +   G      ++F E    G+ A+VV Y
Sbjct: 228 GRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTY 287

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG 572
           S L+  LC+ G  + A ++L+ M + GI P+VVTY  +ID   +       +D +   + 
Sbjct: 288 SCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVE 347

Query: 573 KQKESANL 580
           K +E +N+
Sbjct: 348 KGEEPSNV 355



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 85/201 (42%), Gaps = 39/201 (19%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    ++  +++AK +F      G    ++ ++ L+++  + G  ++A S+F  M  
Sbjct: 500 SILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGN 559

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEI------------------------------ 286
            N +P+++++N +ID   K G DF+ V E+                              
Sbjct: 560 ANCEPDIISFNTMIDGTLKAG-DFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELD 618

Query: 287 -----FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
                 + M+ +G  PD + ++SLL   S  G      NL ++M  +G   D    +T+L
Sbjct: 619 EAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTIL 678

Query: 342 DAICKGAQMDLAFEIMAEMPA 362
             +C   Q     ++M  +P 
Sbjct: 679 TCLCHSIQ---EVDVMELLPT 696


>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
 gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g51965, mitochondrial; Flags: Precursor
 gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
           Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
           thaliana]
 gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
          Length = 650

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 211/422 (50%), Gaps = 12/422 (2%)

Query: 145 ILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILG 204
           ++KK++ K+  +  Y  LL+      ++SKA     F V  E R+        A   +L 
Sbjct: 193 LVKKWDLKM-NSFTYKCLLQAYLRSRDYSKA-----FDVYCEIRRGGHKLDIFAYNMLLD 246

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
            L K + A  +FE           Y ++ +I   GR G C EA+ +FN M    L  N+V
Sbjct: 247 ALAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVV 306

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
            YN ++    KG +     +++F  M+  G +P+  T++ LL +    G       +  E
Sbjct: 307 GYNTLMQVLAKGKM-VDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV-E 364

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           +  R + Q I++Y  L+  + K   +  A  +  +M +  +     +Y +M++    AG+
Sbjct: 365 ISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGK 422

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
             +A+ M S++   G+  D + YNTV S   KL +      + ++M+  G   D  TYN 
Sbjct: 423 TIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNI 482

Query: 445 LLGGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           L+  +G+ G+ DE   +FE++ ++DC  P++++Y++LI+   K G   EA   F+E ++ 
Sbjct: 483 LIASFGRVGEVDEAINIFEELERSDC-KPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           GL  DVV YS L++   K   VE A SL +EM  +G +PN+VTYN ++D   ++  T   
Sbjct: 542 GLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEA 601

Query: 564 VD 565
           VD
Sbjct: 602 VD 603



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 195/379 (51%), Gaps = 10/379 (2%)

Query: 174 KAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSA 233
           KA Q F    KR  R+++     + MI  +GR+GK D A  +F   + EG    V  ++ 
Sbjct: 253 KACQVFEDMKKRHCRRDEYT--YTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNT 310

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG--VDFKHVVEIFDDML 291
           L+    +     +AI VF+ M     +PN  TY+ +++     G  V    VVEI    +
Sbjct: 311 LMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYM 370

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
             G+      ++ L+   S+ G    A  LF +M    +  +  +Y ++L+++C   +  
Sbjct: 371 TQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTI 424

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A E+++++  K +  + + Y+T+     K  ++    ++F +MK  G   D  +YN ++
Sbjct: 425 EAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILI 484

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           + + ++G  +EA+ + +E+E S  + D ++YN+L+   GK G  DE    F++M+   ++
Sbjct: 485 ASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLN 544

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P+++TYSTL++ + K    + A  +F E    G + ++V Y+ L+D L KNG    AV L
Sbjct: 545 PDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDL 604

Query: 532 LDEMTKEGIRPNVVTYNSI 550
             +M ++G+ P+ +TY  +
Sbjct: 605 YSKMKQQGLTPDSITYTVL 623



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 120/535 (22%), Positives = 239/535 (44%), Gaps = 56/535 (10%)

Query: 195 LASAMISILGRLG---KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF 251
           L + +I IL R     + D  ++I ++ +       +   + LI  +G +   Q  + + 
Sbjct: 135 LYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRL- 193

Query: 252 NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
             +K+++LK N  TY  ++ A  +   D+    +++ ++ R G + D   +N LL   ++
Sbjct: 194 --VKKWDLKMNSFTYKCLLQAYLRSR-DYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK 250

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
               E A  +F +M  R   +D +TY  ++  + +  + D A  +  EM  + ++ NVV 
Sbjct: 251 D---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVG 307

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA---KLGRFEEALLVCK 428
           Y+T++   AK   +D A+ +FS M   G   +  +Y+ +L++     +L R +  + + K
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISK 367

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
              + GI      Y+ L+    K G   E  R+F  M +  V     +Y ++++     G
Sbjct: 368 RYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAG 421

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
              EA+++  +  + G+  D ++Y+ +  AL K   +     L ++M K+G  P++ TYN
Sbjct: 422 KTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYN 481

Query: 549 SIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI-IKVFGQ 607
            +I +FGR              +G+  E+ N+           +E  R+D +  I  +  
Sbjct: 482 ILIASFGR--------------VGEVDEAINI----------FEELERSDCKPDIISYNS 517

Query: 608 LVAEKAGQGK-KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
           L+      G   E   R         F++M +  + P+VVT+S ++    +    E A  
Sbjct: 518 LINCLGKNGDVDEAHVR---------FKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYS 568

Query: 667 LLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
           L EE+ +   Q   V + +L+    ++    +A+ L+ ++K    +  S  Y  L
Sbjct: 569 LFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 109/256 (42%), Gaps = 44/256 (17%)

Query: 403 DRVSYNTVLSIYAKLG---RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           D   YN ++ I ++     RF+    +   M  S +  +  T N L+G +G         
Sbjct: 132 DPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCL 191

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           R+ ++     +  N  TY  L+  Y +   Y +A  ++ E ++ G K D+  Y+ L+DAL
Sbjct: 192 RLVKKWD---LKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDAL 248

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
            K+   E A  + ++M K   R +  TY  +I   GR              +GK  E+  
Sbjct: 249 AKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGR--------------IGKCDEAVG 291

Query: 580 L-DAMCSQDDKDVQEAGRTDNQI-IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
           L + M ++        G T N +      Q++A    +GK  ++  Q       VF +M 
Sbjct: 292 LFNEMITE--------GLTLNVVGYNTLMQVLA----KGKMVDKAIQ-------VFSRMV 332

Query: 638 KLKIKPNVVTFSAILN 653
           +   +PN  T+S +LN
Sbjct: 333 ETGCRPNEYTYSLLLN 348


>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 727

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/499 (26%), Positives = 232/499 (46%), Gaps = 34/499 (6%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I   G+ G    A+  FE     G  ++V+A++ LI AY  +   Q A+S    M+   
Sbjct: 129 LIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEIEG 188

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           + PN  T++A+I   G  G + +   + F   +      +   ++S++    + G  E A
Sbjct: 189 IFPNAATFSAIISGYGSSG-NVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNMERA 247

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK---NISPNVVTYSTM 375
             L  +M  +G++  +  YN L+D   +         +  ++ A+    +SP  VTY  +
Sbjct: 248 EALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCL 307

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+ Y K G++  AL    EMK  GI L+R +Y+ ++  Y +LG F  A  V ++M  +GI
Sbjct: 308 INLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGI 367

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VTYN LL  + K  +     ++  +MK    SP + TY T+ID + K G  + A +
Sbjct: 368 EPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYK 427

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
              E K AG + +   Y+ ++  L + G ++ A S++DEM   G++PN  +Y +++  F 
Sbjct: 428 TVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFA 487

Query: 556 RSATT----EC--TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
                    +C   V+++ +       ++ L A C        +AGR  N I      + 
Sbjct: 488 SIGEIGLAFKCLKRVNEITQKPPIISYASLLKACC--------KAGRMQNAI-----AVT 534

Query: 610 AEKAGQGKKENRC-----------RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
            E A  G   N             R ++    G+ QKM +    P++ ++++ +NAC + 
Sbjct: 535 EEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKA 594

Query: 659 NSFEDASMLLEELRLFDNQ 677
              + A+  +EE++  D Q
Sbjct: 595 GDMQKATETIEEMKQQDLQ 613



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 203/422 (48%), Gaps = 40/422 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEA--------- 247
           SA+IS  G  G V+ A+  F+ +++E + + V  +S++I AY ++G  + A         
Sbjct: 197 SAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEE 256

Query: 248 --------------------------ISVFNSMKR---YNLKPNLVTYNAVIDACGKGGV 278
                                     ++VF+ +K      L P  VTY  +I+   K G 
Sbjct: 257 QGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGK 316

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K  +E   +M   G+  +R T++ L+    + G +  A ++F +M   GI+ D  TYN
Sbjct: 317 MMK-ALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYN 375

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            LL A CK  QM  A +++  M  +  SP + TY T+IDG+ K G +  A    SEMK  
Sbjct: 376 ILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLA 435

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   +  +YN ++    +LG+ + A  V  EME +G++ +  +Y  L+ G+   G+    
Sbjct: 436 GCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLA 495

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            +  +++      P +++Y++L+    K G  + A+ +  E   AG+  +  +++ L+D 
Sbjct: 496 FKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDG 555

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
             + G +  A  ++ +M +EG  P++ +Y S ++A  ++   +   + +E ++ +Q    
Sbjct: 556 WAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIE-EMKQQDLQP 614

Query: 579 NL 580
           NL
Sbjct: 615 NL 616



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 169/344 (49%), Gaps = 4/344 (1%)

Query: 214 NIF---ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           N+F   +  ++ G   T   +  LI+ Y + G   +A+     MK   +  N  TY+ ++
Sbjct: 284 NVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLV 343

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           D   + G DF +   +F+DM   G++PD +T+N LL    +      A  L   M  RG 
Sbjct: 344 DGYVQLG-DFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGC 402

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
              I TY T++D   K   + +A++ ++EM      PN  TY+ ++    + G++D A +
Sbjct: 403 SPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAAS 462

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +  EM+  G+  +  SY T++  +A +G    A    K +     +   ++Y +LL    
Sbjct: 463 VIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACC 522

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K G+      + E+M    V  N   ++TL+D +++ G   EA  I ++ +Q G   D+ 
Sbjct: 523 KAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIH 582

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            Y++ ++A CK G ++ A   ++EM ++ ++PN+ TY  +I  +
Sbjct: 583 SYTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGW 626



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 161/340 (47%), Gaps = 11/340 (3%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           +LG    A ++FE     G       ++ L+ A+ +S     AI +   MK     P + 
Sbjct: 348 QLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQ 407

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TY  +ID   K G D +   +   +M   G +P+  T+N ++    + G  + A ++ +E
Sbjct: 408 TYITIIDGFMKTG-DVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDE 466

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M   G+  +  +Y TL+       ++ LAF+ +  +      P +++Y++++    KAGR
Sbjct: 467 MELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGR 526

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           + +A+ +  EM F G+ ++   +NT+L  +A+ G   EA  + ++M   G   D  +Y +
Sbjct: 527 MQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTS 586

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
            +    K G   +     E+MK   + PNL TY+ LI  ++     ++A+  + E K AG
Sbjct: 587 FVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAAG 646

Query: 505 LKADVVLYSALIDAL----------CKNGLVESAVSLLDE 534
           L  D  LY  ++ +L           +NG+++    ++D+
Sbjct: 647 LIPDKPLYYCIVTSLLSKAAIARETVRNGVLQVTSEMVDQ 686



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/396 (23%), Positives = 166/396 (41%), Gaps = 36/396 (9%)

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+ +I  Y K G    A   F +M+  GI     +YN ++  Y      + A+   +EME
Sbjct: 126 YALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEME 185

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
             GI  +A T++A++ GYG  G  +   + F++  ++  + N+  YS++I  Y K G  +
Sbjct: 186 IEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNME 245

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE---GIRPNVVTYN 548
            A  +  + ++ GL+A + LY+ L+D   +  +    +++  ++      G+ P  VTY 
Sbjct: 246 RAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYG 305

Query: 549 SIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
            +I+ + +              LGK  ++      C    K+++  G T N+    +  L
Sbjct: 306 CLINLYTK--------------LGKMMKALEF---C----KEMKAQGITLNR--NTYSML 342

Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
           V      G   N           VF+ M +  I+P+ VT++ +L A  +      A  LL
Sbjct: 343 VDGYVQLGDFAN--------AFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLL 394

Query: 669 EELRLFD-NQVYGVAHGLLMGYRDNIWVQ-ALSLFDEVKLMDSSTASAFYNALTDMLWHF 726
             ++    +        ++ G+     V+ A     E+KL      +  YN +   L   
Sbjct: 395 GRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQL 454

Query: 727 GQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSG 762
           GQ   A  V+ E +   V  N  S + L     S G
Sbjct: 455 GQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIG 490


>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 540

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 205/396 (51%), Gaps = 3/396 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+ E G RG +S+A++ F+  +K E    D G    A++S   ++G +D      + 
Sbjct: 97  YNILILEYGKRGNFSQAMKYFS-QLKDEGLLPDSGTYC-AVLSACRKVGNIDKGNETLKE 154

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G      A+S LI  +G++G  ++A + F  ++     P+ V YN +I A  K G+
Sbjct: 155 MREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGM 214

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                  +F +  R+    D + F +++ V ++  + + A ++   M   G+  +   Y 
Sbjct: 215 -VDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYG 273

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           ++L+A  +  Q   A ++  EM   N      TY TM++ Y+KAG    A  + ++M+ L
Sbjct: 274 SVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQL 333

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   + V+Y+T++ +Y K+G+ +EA  +   M+  G + + + YN +L  YGK G+ ++ 
Sbjct: 334 GFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDA 393

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            R+  ++K   + P+ +TY+TLI+ Y++ G ++E +++F + +  GLK D +L + +I+ 
Sbjct: 394 ERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINV 453

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             K         LL+ M K GI+P+     ++++ +
Sbjct: 454 YGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIY 489



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 179/356 (50%), Gaps = 3/356 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+   A++ F      G    +  ++ LI  YG+ G   +A+  F+ +K   L P+  TY
Sbjct: 73  GRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTY 132

Query: 267 NAVIDACGK-GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
            AV+ AC K G +D  +  E   +M   G++PD++ ++ L+ +  + G  E A   F E+
Sbjct: 133 CAVLSACRKVGNIDKGN--ETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFREL 190

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              G   D   YNTL+ A  K   +D A  +  E        + V + TMI  YAKA   
Sbjct: 191 QMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMA 250

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D AL++   MK +G+  + + Y +VL+ + +  +   A+ + +EM+ S  R    TY  +
Sbjct: 251 DQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITM 310

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           L  Y K G +     +  +M+      N++ YSTLID+Y K G  +EA ++F   KQ G 
Sbjct: 311 LNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGC 370

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           K ++++Y+ ++D   K G +  A  L+ E+    + P+ VTY ++I+A+ R    E
Sbjct: 371 KGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFE 426



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/408 (22%), Positives = 185/408 (45%), Gaps = 38/408 (9%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           + D+M+     PD   +  ++      G ++ A++ F++M   G   DI  YN L+    
Sbjct: 46  LVDEMIGKNCPPDIKFYALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYG 105

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K      A +  +++  + + P+  TY  ++    K G +D       EM+  GI  D+V
Sbjct: 106 KRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQV 165

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y+ ++ ++ K GR E+A    +E++ SG   D+V YN L+  + K G  D+   +F++ 
Sbjct: 166 AYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEA 225

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           +      + + + T+I VY+K  +  +A+ + +  K+ GL+ + + Y ++++A  +    
Sbjct: 226 QRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQP 285

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIID---------------------AFGRSATTECTV 564
             A+ L +EM +   R    TY ++++                      F R+     T+
Sbjct: 286 MGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTL 345

Query: 565 DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
            D+   +GK +E+  L +   Q  +  +      N ++ ++G     KAG+     R   
Sbjct: 346 IDMYGKVGKLQEATRLFSTMKQ--QGCKGNLIVYNTMLDMYG-----KAGRINDAERLMA 398

Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           E          +   K+ P+ VT++ ++NA +R   FE+   + E+ R
Sbjct: 399 E----------LKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHR 436


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 191/411 (46%), Gaps = 43/411 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    + GK+D+A +        G   TVY +S+LIS + + G  + A S+F+ M  
Sbjct: 394 SILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIA 453

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             LKPN+V Y ++I    K G +  +   ++ +M   G+ P+  TF +L++         
Sbjct: 454 NGLKPNVVIYTSLISGYCKEG-ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMA 512

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  LF EMV   +  +  TYN L++  CK      AFE++ EM  K + P+  TY  +I
Sbjct: 513 EANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLI 572

Query: 377 DGYAKAGRLDDALNMFSEMK--------FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
            G    GR+ +A    ++++          G   + V+Y  +++   K+G  ++A L+C+
Sbjct: 573 SGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCR 632

Query: 429 EMESS----------------------------------GIRKDAVTYNALLGGYGKQGK 454
           EM +S                                  G   + VTYN L+ G+ K G+
Sbjct: 633 EMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGR 692

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
             E   +   M    +SP+ ++YST+I  Y + G  KEA++++      G+  D V Y+ 
Sbjct: 693 IQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNF 752

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           LI   C  G +  A  L D+M + G++PN  TYNS+I      ++   T D
Sbjct: 753 LIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 803



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 192/383 (50%), Gaps = 4/383 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A++  L  L     A+ +     + G   +V  ++  I    ++    EA+ + N +  
Sbjct: 219 TAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSY 278

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L+ ++ TY  ++    K   +F+   E+ ++M+  G  P     ++L+    + G   
Sbjct: 279 KGLRADVGTYCTLVLGLCKVE-EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIG 337

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +A +L N++   G+   +F YN L++++CK  ++D A  +   M  K + PN VTYS +I
Sbjct: 338 SAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILI 397

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D + K G+LD AL+   +M  +GI      Y++++S + KLG+   A  +  EM ++G++
Sbjct: 398 DSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLK 457

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + V Y +L+ GY K+G+     R++ +M    +SPN  T++ LI          EA ++
Sbjct: 458 PNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF-- 554
           F E  +  +  + V Y+ LI+  CK G    A  LLDEM ++G+ P+  TY  +I     
Sbjct: 518 FGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCS 577

Query: 555 -GRSATTECTVDDVERDLGKQKE 576
            GR +     ++D++ +  K  E
Sbjct: 578 TGRVSEAREFMNDLQGEQQKLNE 600



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 154/315 (48%), Gaps = 9/315 (2%)

Query: 250 VFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC 309
           + N M  +   P+    + ++D   K G +     ++ + + + GV P    +N+L+   
Sbjct: 307 MMNEMIEFGFVPSEAAVSNLVDGLRKKG-NIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
            + G  + A +LFN M H+G+  +  TY+ L+D+ CK  ++D+A   + +M    I   V
Sbjct: 366 CKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATV 425

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
             YS++I G+ K G+L  A ++F EM   G+  + V Y +++S Y K G    A  +  E
Sbjct: 426 YPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHE 485

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M   GI  +  T+ AL+ G     +  E  ++F +M    V PN +TY+ LI+ + K G 
Sbjct: 486 MTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGN 545

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK--------EGIR 541
              A ++  E  + GL  D   Y  LI  LC  G V  A   ++++          EG  
Sbjct: 546 TVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCL 605

Query: 542 PNVVTYNSIIDAFGR 556
           PNVVTY ++I+   +
Sbjct: 606 PNVVTYTALINGLCK 620



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 155/333 (46%), Gaps = 1/333 (0%)

Query: 226 NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE 285
           +T   F  LI  Y ++    + + V   M    + P + T + V++   +    F+  + 
Sbjct: 143 STTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIR-QFRMALH 201

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +FD+++ +G++PD   + +++        +  AR +   M   G D  + TYN  +  +C
Sbjct: 202 LFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLC 261

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  ++  A EI   +  K +  +V TY T++ G  K    +    M +EM   G      
Sbjct: 262 KNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEA 321

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           + + ++    K G    A  +  +++  G+      YNAL+    K GK DE   +F  M
Sbjct: 322 AVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNM 381

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
               + PN +TYS LID + K G    A+    +  + G+KA V  YS+LI   CK G +
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            +A SL DEM   G++PNVV Y S+I  + +  
Sbjct: 442 RAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 192/421 (45%), Gaps = 41/421 (9%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M+  G+ P   T + +L    R   +  A +LF+E+V  G+  D++ Y  ++ ++C+   
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              A E++  M +     +V TY+  I G  K  R+ +A+ + + + + G+  D  +Y T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    K+  FE    +  EM   G        + L+ G  K+G       +  ++K   
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           V+P+L  Y+ LI+   K G   EA  +F      GL  + V YS LID+ CK G ++ A+
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCSQDD 588
             L +MT+ GI+  V  Y+S+I    +              LGK + + +L D M +   
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCK--------------LGKLRAAKSLFDEMIAN-- 454

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
                 G   N +I  +  L++    +G+  N  R        ++ +M    I PN  TF
Sbjct: 455 ------GLKPNVVI--YTSLISGYCKEGELHNAFR--------LYHEMTGKGISPNTYTF 498

Query: 649 SAILNACSRCNSFEDASMLLEEL---RLFDNQV-YGVAHGLLMGY-RDNIWVQALSLFDE 703
           +A+++     N   +A+ L  E+    +  N+V Y V   L+ G+ ++   V+A  L DE
Sbjct: 499 TALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNV---LIEGHCKEGNTVRAFELLDE 555

Query: 704 V 704
           +
Sbjct: 556 M 556



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 122/247 (49%), Gaps = 14/247 (5%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQ--GKLA-----SAMISILGRLG 207
           D YT+  L+  L + G  S+A + F   ++ E++K ++  G L      +A+I+ L ++G
Sbjct: 564 DTYTYRPLISGLCSTGRVSEARE-FMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIG 622

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
            +D A+ +    L          ++  +      G  ++AI + + +       N VTYN
Sbjct: 623 LMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYN 681

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
            +I    K G   +   E+  +M+ +G+ PD I++++++   C RG L EA + L+  M+
Sbjct: 682 ILIRGFCKLG-RIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIK-LWESML 739

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
           +RG++ D   YN L+   C   ++  AFE+  +M  + + PN  TY+++I G      + 
Sbjct: 740 NRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVS 799

Query: 387 DALNMFS 393
              + FS
Sbjct: 800 STADYFS 806



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 129/314 (41%), Gaps = 24/314 (7%)

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           +  +I  Y +  R  D L +   M   GI     + + VL+   ++ +F  AL +  E+ 
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           SSG+R D   Y A++    +   +   R +  +M++     ++ TY+  I    K     
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           EA++I       GL+ADV  Y  L+  LCK    E+   +++EM + G  P+    ++++
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327

Query: 552 DAFGRSATTECTVDDVE--RDLGKQKE----SANLDAMCSQDDKDVQEA--------GRT 597
           D   +        D V   +  G        +A +++MC     D  E+        G  
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387

Query: 598 DNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSR 657
            N +   +  L+     +GK +          L    KM ++ IK  V  +S++++   +
Sbjct: 388 PNDV--TYSILIDSFCKRGKLD--------VALHFLGKMTEVGIKATVYPYSSLISGHCK 437

Query: 658 CNSFEDASMLLEEL 671
                 A  L +E+
Sbjct: 438 LGKLRAAKSLFDEM 451


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 145/565 (25%), Positives = 258/565 (45%), Gaps = 40/565 (7%)

Query: 120 RHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLC--GADDYTFLLRELGNRGEWSKAIQ 177
           R + VA   L H    AR      D+  K +   C      YT L++ L      S+A+ 
Sbjct: 285 RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALN 344

Query: 178 CFAFAVKREERKNDQGKL--ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALI 235
                VK  E    +  +   + +I  L    K + A+ +    L +G    V  ++ALI
Sbjct: 345 ----LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400

Query: 236 SAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV 295
           + Y + G  ++A+ V   M+   L PN  TYN +I    K  V     + + + ML   V
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV--HKAMGVLNKMLERKV 458

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
            PD +T+NSL+    R G +++A  L + M  RG+  D +TY +++D++CK  +++ A +
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           +   +  K ++PNVV Y+ +IDGY KAG++D+A  M  +M       + +++N ++    
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
             G+ +EA L+ ++M   G++    T   L+    K G +D     F+QM +    P+  
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAH 638

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY+T I  Y + G   +A  +  + ++ G+  D+  YS+LI      G    A  +L  M
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES-ANLDAMCSQDDKDVQEA 594
              G  P+  T+ S+I               +E   GKQK S   L AM +  + D    
Sbjct: 699 RDTGCEPSQHTFLSLIKHL------------LEMKYGKQKGSEPELCAMSNMMEFDT--- 743

Query: 595 GRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLK-IKPNVV 646
                 ++++  ++V        K        +C +G       VF  M + + I P+ +
Sbjct: 744 ------VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797

Query: 647 TFSAILNACSRCNSFEDASMLLEEL 671
            F+A+L+ C +     +A+ +++++
Sbjct: 798 VFNALLSCCCKLKKHNEAAKVVDDM 822



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 187/389 (48%), Gaps = 35/389 (8%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +++ L R G VD  K ++   L +     +Y ++ +++ Y + G  +EA    + +  
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246

Query: 257 YNLKPNLVTYNAVI---------------------DACGKGGVDFKHVV----------- 284
             L P+  TY ++I                       C +  V + H++           
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306

Query: 285 --EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             ++F  M  +   P   T+  L+           A NL  EM   GI  +I TY  L+D
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           ++C   + + A E++ +M  K + PNV+TY+ +I+GY K G ++DA+++   M+   +  
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           +  +YN ++  Y K     +A+ V  +M    +  D VTYN+L+ G  + G +D   R+ 
Sbjct: 427 NTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
             M    + P+  TY+++ID   K    +EA  +F   +Q G+  +VV+Y+ALID  CK 
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           G V+ A  +L++M  +   PN +T+N++I
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALI 574



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 176/344 (51%), Gaps = 6/344 (1%)

Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKH 282
           Y   +  ++ L+++  R G   E   V+  M    + PN+ TYN +++  C  G V+   
Sbjct: 179 YKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVE--E 236

Query: 283 VVEIFDDMLRNGVQPDRITFNSL-LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             +    ++  G+ PD  T+ SL +  C R  L ++A  +FNEM  +G  ++   Y  L+
Sbjct: 237 ANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDL-DSAFKVFNEMPLKGCRRNEVAYTHLI 295

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             +C   ++D A ++  +M      P V TY+ +I     + R  +ALN+  EM+  GI 
Sbjct: 296 HGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK 355

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            +  +Y  ++       +FE+A  +  +M   G+  + +TYNAL+ GY K+G  ++   +
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
            E M++  +SPN  TY+ LI  Y K  ++K AM +  +  +  +  DVV Y++LID  C+
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCR 474

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
           +G  +SA  LL  M   G+ P+  TY S+ID+  +S   E   D
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 200/426 (46%), Gaps = 49/426 (11%)

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           I  YNTLL+++ +   +D   ++  EM    + PN+ TY+ M++GY K G +++A    S
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           ++   G+  D  +Y +++  Y +    + A  V  EM   G R++ V Y  L+ G     
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           + DE   +F +MK D   P + TY+ LI          EA+ + +E ++ G+K ++  Y+
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            LID+LC     E A  LL +M ++G+ PNV+TYN++I+ + +    E  VD VE  +  
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL-MES 421

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
           +K S N                RT N++IK +                C+  +   +GV 
Sbjct: 422 RKLSPN---------------TRTYNELIKGY----------------CKSNVHKAMGVL 450

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVY-GVAHGLLMG 688
            KM + K+ P+VVT++++++   R  +F+ A  LL  +     + D   Y  +   L   
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510

Query: 689 YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENV 748
            R     +A  LFD ++    +     Y AL D     G+   A L++         E +
Sbjct: 511 KRVE---EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML---------EKM 558

Query: 749 WSESCL 754
            S++CL
Sbjct: 559 LSKNCL 564



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/471 (23%), Positives = 212/471 (45%), Gaps = 65/471 (13%)

Query: 220 LNEGYGNTVYAFSALI----SAYGRSGYCQEAISVFNSMKRYNLKPNLV--TYNAVIDAC 273
           +N GY   V+    L+     + G + Y  +     N  +R+ LK  L+   YN ++++ 
Sbjct: 134 INNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSL 193

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
            + G+    + +++ +ML + V P+  T+N ++    + G  E A    +++V  G+D D
Sbjct: 194 ARFGL-VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPD 252

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
            FTY +L+   C+   +D AF++  EMP K    N V Y+ +I G   A R+D+A+++F 
Sbjct: 253 FFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFV 312

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           +MK         +Y  ++       R  EAL + KEME +GI+                 
Sbjct: 313 KMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK----------------- 355

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
                             PN+ TY+ LID       +++A ++  +  + GL  +V+ Y+
Sbjct: 356 ------------------PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYN 397

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT---VDDVERD 570
           ALI+  CK G++E AV +++ M    + PN  TYN +I  + +S   +        +ER 
Sbjct: 398 ALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERK 457

Query: 571 LGKQKESAN--LDAMCSQDDKD--------VQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
           +     + N  +D  C   + D        + + G   +Q    +  ++       + E 
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW--TYTSMIDSLCKSKRVEE 515

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            C         +F  + +  + PNVV ++A+++   +    ++A ++LE++
Sbjct: 516 AC--------DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 183/440 (41%), Gaps = 94/440 (21%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           R G  D A  +     + G     + ++++I +  +S   +EA  +F+S+++  + PN+V
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
            Y A+ID  C  G VD  H+  + + ML     P+ +TFN+L+  +C+ G L EA   L 
Sbjct: 534 MYTALIDGYCKAGKVDEAHL--MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL-LE 590

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
            +MV  G+   + T   L+  + K    D A+    +M +    P+  TY+T I  Y + 
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCRE 650

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           GRL DA +M ++M+  G+  D  +Y++++  Y  LG+   A  V K M  +G      T+
Sbjct: 651 GRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF 710

Query: 443 NALLG-----GYGKQG-------------KYDEVRRMFEQMKADCVSPNL---------- 474
            +L+       YGKQ              ++D V  + E+M    V+PN           
Sbjct: 711 LSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGI 770

Query: 475 --------------------------LTYSTLIDVYSK---------------------- 486
                                     L ++ L+    K                      
Sbjct: 771 CEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQ 830

Query: 487 --------GGLYKEAMQ-----IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
                    GLYK+  +     +F+   Q G   D + +  +ID + K GLVE+   L +
Sbjct: 831 LESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFN 890

Query: 534 EMTKEGIRPNVVTYNSIIDA 553
            M K G + +  TY+ +I+ 
Sbjct: 891 VMEKNGCKFSSQTYSLLIEG 910


>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g04810, chloroplastic; AltName: Full=Maize PPR4
           homolog; Short=AtPPR4; Flags: Precursor
 gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
           thaliana]
 gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 952

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 187/368 (50%), Gaps = 4/368 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I++  ++GK+  A  +      EG  + +  +S +I+ + +      A +VF  M +  
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           +KP+++ YN +I A CG G +D    ++   +M +   +P   TF  ++   ++ G    
Sbjct: 550 MKPDVILYNNIISAFCGMGNMD--RAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRR 607

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           +  +F+ M   G    + T+N L++ + +  QM+ A EI+ EM    +S N  TY+ ++ 
Sbjct: 608 SLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 667

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GYA  G    A   F+ ++  G+ +D  +Y  +L    K GR + AL V KEM +  I +
Sbjct: 668 GYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPR 727

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           ++  YN L+ G+ ++G   E   + +QMK + V P++ TY++ I   SK G    A Q  
Sbjct: 728 NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTI 787

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-FGR 556
            E +  G+K ++  Y+ LI    +  L E A+S  +EM   GI+P+   Y+ ++ +   R
Sbjct: 788 EEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSR 847

Query: 557 SATTECTV 564
           ++  E  +
Sbjct: 848 ASIAEAYI 855



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/542 (23%), Positives = 238/542 (43%), Gaps = 37/542 (6%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           M+   GR G +  A+  FE     G   T   +++LI AY       EA+S    MK   
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374

Query: 259 LKPNLVTYNAVIDACGKGG----VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           ++ +LVTY+ ++    K G     D+      FD+  R     +   +  ++    +   
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADY-----WFDEAKRIHKTLNASIYGKIIYAHCQTCN 429

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            E A  L  EM   GID  I  Y+T++D     A       +   +     +P VVTY  
Sbjct: 430 MERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGC 489

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I+ Y K G++  AL +   MK  G+  +  +Y+ +++ + KL  +  A  V ++M   G
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++ D + YN ++  +   G  D   +  ++M+     P   T+  +I  Y+K G  + ++
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++F   ++ G    V  ++ LI+ L +   +E AV +LDEMT  G+  N  TY  I+  +
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQD-DKDVQEAGRTDNQIIKVFGQLVAEKA 613
                T    +   R    Q E  ++D    +   K   ++GR  + +      +  E +
Sbjct: 670 ASVGDTGKAFEYFTR---LQNEGLDVDIFTYEALLKACCKSGRMQSAL-----AVTKEMS 721

Query: 614 GQGKKENRC-----------RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
            +    N             R ++     + Q+M K  +KP++ T+++ ++ACS+     
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 781

Query: 663 DASMLLEELRLF----DNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYN 717
            A+  +EE+       + + Y     L+ G+ R ++  +ALS ++E+K M      A Y+
Sbjct: 782 RATQTIEEMEALGVKPNIKTYTT---LIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838

Query: 718 AL 719
            L
Sbjct: 839 CL 840



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 183/391 (46%), Gaps = 12/391 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ ++       +W+ A   F   VK E  K D   L + +IS    +G +D A    + 
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVK-EGMKPDV-ILYNNIISAFCGMGNMDRAIQTVKE 579

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                +  T   F  +I  Y +SG  + ++ VF+ M+R    P + T+N +I+   +   
Sbjct: 580 MQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKR- 638

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             +  VEI D+M   GV  +  T+  ++   +  G    A   F  + + G+D DIFTY 
Sbjct: 639 QMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYE 698

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            LL A CK  +M  A  +  EM A+NI  N   Y+ +IDG+A+ G + +A ++  +MK  
Sbjct: 699 ALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKE 758

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D  +Y + +S  +K G    A    +EME+ G++ +  TY  L+ G+ +    ++ 
Sbjct: 759 GVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKA 818

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVY------SKGGLYKEAMQIFREFKQAGLKADVVLY 512
              +E+MKA  + P+   Y  L+         ++  +Y   M I +E  +AGL  D+   
Sbjct: 819 LSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTA 878

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
                 LCK   +E++   L E  ++   P+
Sbjct: 879 VHWSKCLCK---IEASGGELTETLQKTFPPD 906



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 173/377 (45%), Gaps = 9/377 (2%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
           G+ SKA++     V +EE      K  S MI+   +L     A  +FE  + EG    V 
Sbjct: 498 GKISKALE--VSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            ++ +ISA+   G    AI     M++   +P   T+  +I    K G D +  +E+FD 
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG-DMRRSLEVFDM 614

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M R G  P   TFN L+         E A  + +EM   G+  +  TY  ++        
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              AFE    +  + +  ++ TY  ++    K+GR+  AL +  EM    I  +   YN 
Sbjct: 675 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNI 734

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++  +A+ G   EA  + ++M+  G++ D  TY + +    K G  +   +  E+M+A  
Sbjct: 735 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 794

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA- 528
           V PN+ TY+TLI  +++  L ++A+  + E K  G+K D  +Y  L+ +L     +  A 
Sbjct: 795 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 854

Query: 529 -----VSLLDEMTKEGI 540
                +++  EM + G+
Sbjct: 855 IYSGVMTICKEMVEAGL 871



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 140/317 (44%), Gaps = 39/317 (12%)

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G +++ V+  F+ + +    P R  F  ++    R G    AR  F  M  RGI      
Sbjct: 291 GDNWQAVISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 346

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG------------- 383
           Y +L+ A   G  MD A   + +M  + I  ++VTYS ++ G++KAG             
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK 406

Query: 384 RLDDALN----------------------MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
           R+   LN                      +  EM+  GI      Y+T++  Y  +   +
Sbjct: 407 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 466

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           + L+V K ++  G     VTY  L+  Y K GK  +   +   MK + V  NL TYS +I
Sbjct: 467 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI 526

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
           + + K   +  A  +F +  + G+K DV+LY+ +I A C  G ++ A+  + EM K   R
Sbjct: 527 NGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR 586

Query: 542 PNVVTYNSIIDAFGRSA 558
           P   T+  II  + +S 
Sbjct: 587 PTTRTFMPIIHGYAKSG 603



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 52/259 (20%), Positives = 107/259 (41%), Gaps = 46/259 (17%)

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P+   +  ++  Y + G    A + F   +  G+     +Y++LI A      ++ A+S 
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECT---VDDVER---DLGKQKESANLDAMCS 585
           + +M +EGI  ++VTY+ I+  F ++   E      D+ +R    L        + A C 
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426

Query: 586 QDD--------KDVQEAG-----RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
             +        ++++E G        + ++  +  +  EK G               L V
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKG---------------LVV 471

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGL------L 686
           F+++ +    P VVT+  ++N  ++      A   LE  R+   +  GV H L      +
Sbjct: 472 FKRLKECGFTPTVVTYGCLINLYTKVGKISKA---LEVSRVMKEE--GVKHNLKTYSMMI 526

Query: 687 MGY-RDNIWVQALSLFDEV 704
            G+ +   W  A ++F+++
Sbjct: 527 NGFVKLKDWANAFAVFEDM 545


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 200/398 (50%), Gaps = 15/398 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA----SAMISILGRLGKVDLAKN 214
           Y+ L+     +G+  K +         EE ++ Q K +    +++I  L +   +  A +
Sbjct: 429 YSILINAFCGKGDVMKCLDLM------EEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVD 482

Query: 215 IFET--ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
           IF +  A +  Y +TVY    LI  +   G    AI +   M    L P   +  ++I  
Sbjct: 483 IFHSIGASSCKYDSTVY--ETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRG 540

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
             K G+ F   +E+F+ MLR+G+ PD I  N +L    R G ++ A  L  +    G + 
Sbjct: 541 YYKLGL-FDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNL 599

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           +  +YN ++  +CK    + A E++  M  +N+ P+VV YST+I G+AK      A+N+F
Sbjct: 600 NPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLF 659

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           + M  +GI  +  +Y  ++SI++   +  EA  + KEM+  G+  D ++Y  L+ G+   
Sbjct: 660 TRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNN 719

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
            +  +   +FE+M  +  SPN++TY+ +ID + K      A  +F +  +  +  DVV Y
Sbjct: 720 REMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTY 779

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           + LID   K+G  + A  L D M  +G+ P+ +T+N +
Sbjct: 780 TVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 187/397 (47%), Gaps = 38/397 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S  I  L ++G V+ A  +             ++F+ +I  + + G   EA+ V   MK 
Sbjct: 360 STYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKS 419

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + P++ +Y+ +I+A CGKG  D    +++ ++M  + ++P  +++ SL+    +  + 
Sbjct: 420 SGILPDVYSYSILINAFCGKG--DVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNML 477

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A ++F+ +       D   Y TL+D  C    MD A +++ EM    + P   +  ++
Sbjct: 478 QNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSL 537

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV--------- 426
           I GY K G  D AL +F+ M   GI  D ++ N +L    + G F+EAL +         
Sbjct: 538 IRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGF 597

Query: 427 --------------CKE------------MESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
                         CKE            M    +    V Y+ L+ G+ KQ  +     
Sbjct: 598 NLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVN 657

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F +M    ++ N+ TY+ L+ ++S      EA  IF+E K+ GL  D + Y+ LI   C
Sbjct: 658 LFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFC 717

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            N  ++ A +L +EM++EG  PNV+TY  IID F +S
Sbjct: 718 NNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKS 754



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 236/496 (47%), Gaps = 39/496 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC----QEAISVFNSM 254
           ++  L    +V+  + +FE   + G    +Y ++ +++ Y     C    ++A  +   +
Sbjct: 288 LLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKI 347

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN---GVQP-DRITFNSLL-AVC 309
            R   KP +VTY+  I    K G      VE    ++RN     QP +  +FN ++   C
Sbjct: 348 YRSGEKPTVVTYSTYIHGLCKVGN-----VEAALMLIRNLHYTNQPLNSHSFNDVIYGFC 402

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNV 369
            RG ++EA + L  EM   GI  D+++Y+ L++A C    +    ++M EM    I P++
Sbjct: 403 KRGEVFEALQVL-EEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSI 461

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           V+Y+++I G  K   L +A+++F  +       D   Y T++  +   G  + A+ + +E
Sbjct: 462 VSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEE 521

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M  + +   A +  +L+ GY K G +D+   +F  M  D + P+ +  + ++D   + G 
Sbjct: 522 MICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGY 581

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
           +KEA+ +  +F++ G   +   Y+A+I  LCK G  E A+ LL  M K  + P+VV Y++
Sbjct: 582 FKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYST 641

Query: 550 IIDAFGRSATTECTVDDVER--DLGKQKESANLDAMCSQDD------------KDVQEAG 595
           +I  F + +  +  V+   R   +G     A    + S               K+++E G
Sbjct: 642 LISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERG 701

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
              +QI   +  L+      G   NR   E+     +F++M +    PNV+T++ I++  
Sbjct: 702 LCLDQI--SYTTLIV-----GFCNNR---EMKKAWALFEEMSREGCSPNVITYTCIIDGF 751

Query: 656 SRCNSFEDASMLLEEL 671
            + N  + A+ + +++
Sbjct: 752 CKSNRIDLATWVFDKM 767



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 109/504 (21%), Positives = 211/504 (41%), Gaps = 83/504 (16%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G+ +++  F  ++ A+  +G   E  ++                  ++  C +   D   
Sbjct: 187 GFSHSISCFRIIVHAFALAGMRLEVWALLRD---------------IVGFCNEAKYD--- 228

Query: 283 VVEIFDDMLRNGVQPDR--ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
             E+F   L +    +R  + F+ L++V +   + E A ++F+   H G++ DI T N L
Sbjct: 229 TFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFL 288

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVT----------------------------- 371
           L  + +  +++    +  E+  +  SPN+ T                             
Sbjct: 289 LKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIY 348

Query: 372 ----------YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
                     YST I G  K G ++ AL +   + +    L+  S+N V+  + K G   
Sbjct: 349 RSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVF 408

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           EAL V +EM+SSGI  D  +Y+ L+  +  +G   +   + E+M+   + P++++Y++LI
Sbjct: 409 EALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLI 468

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
               K  + + A+ IF     +  K D  +Y  LID  C  G ++SA+ LL+EM    + 
Sbjct: 469 HGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELV 528

Query: 542 PNVVTYNSIIDAFGRSATTECTVDDVE---RD-LGKQKESAN--LDAMCSQDD------- 588
           P   +  S+I  + +    +  ++      RD +     + N  LD  C           
Sbjct: 529 PTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTL 588

Query: 589 -KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
            +D QE G   N     +  ++ +   +G  E          L +  +M K  + P+VV 
Sbjct: 589 LEDFQEHGFNLNP--HSYNAIIYKLCKEGYPERA--------LELLPRMLKRNVLPSVVN 638

Query: 648 FSAILNACSRCNSFEDASMLLEEL 671
           +S +++  ++ ++F+ A  L   +
Sbjct: 639 YSTLISGFAKQSNFKRAVNLFTRM 662


>gi|255661198|gb|ACU25768.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 426

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 222/444 (50%), Gaps = 36/444 (8%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y +S LI+ +G+ G   +A+S    M++  ++ +LV Y+ +I+   K   D+   + IF 
Sbjct: 10  YTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKL-CDYSKAISIFS 68

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            + R+G+ PD + +NS++ V  +  L+  AR+L +EM   G+  D  +Y  LL    +  
Sbjct: 69  RLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTMYVENK 128

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +   A  + AEM       ++ T + MID Y + G   +A  +F  M+ LGI  + VSYN
Sbjct: 129 KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNVVSYN 188

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+L +Y     F EA+ + + M+   I ++ VTYN+++  YGK  ++++   + ++M++ 
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSR 248

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + PN +TYST+I ++ K G    A  +F + + +G++ D VLY  +I A  + GLV  A
Sbjct: 249 GIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHA 308

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
             LL E+      P+ +  ++ I    R+              G+ +E+  +        
Sbjct: 309 KRLLHELKT----PDNIPRDTAIHILARA--------------GRIEEATWV-------F 343

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
           +   +AG   +  I VF +++   +   K  N        I+ VF KM  L+   +    
Sbjct: 344 RQAIDAGEVKD--ITVFERMIDLFSKYKKYSN--------IVEVFDKMRGLEYFSDSYVI 393

Query: 649 SAILNACSRCNSFEDASMLLEELR 672
           + +LNA  + + FE A+ +  E++
Sbjct: 394 ALVLNAYGKLHEFEKANDVYTEMQ 417



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 178/360 (49%), Gaps = 5/360 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+  G+ G  D A +  +    +     +  +S LI    +     +AIS+F+ +KR
Sbjct: 13  STLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSKAISIFSRLKR 72

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P+LV YN++I+  GK  + F+    +  +M   GV PD +++ +LL +      + 
Sbjct: 73  SGIMPDLVVYNSMINVFGKAKL-FREARSLISEMRTAGVMPDTVSYTALLTMYVENKKFL 131

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A ++F EM       D+ T N ++D   +      A ++   M    I PNVV+Y+T++
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNVVSYNTLL 191

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             Y  A    +A+++F  M+   I  + V+YN+++ IY K    E+A  + +EM+S GI 
Sbjct: 192 RVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 251

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +A+TY+ ++  +GK GK D    +FE++++  +  + + Y T+I  Y + GL   A ++
Sbjct: 252 PNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRL 311

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             E K      D +     I  L + G +E A  +  +    G   ++  +  +ID F +
Sbjct: 312 LHELKT----PDNIPRDTAIHILARAGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSK 367



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 144/263 (54%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
            + PDR T+++L+    + GL++ A +   +M    +  D+  Y+ L++   K      A
Sbjct: 4   ALSPDRYTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSKA 63

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             I + +    I P++V Y++MI+ + KA    +A ++ SEM+  G+  D VSY  +L++
Sbjct: 64  ISIFSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTM 123

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           Y +  +F EAL V  EM       D  T N ++  YG+ G   E  ++F  M+   + PN
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPN 183

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           +++Y+TL+ VY    L+ EA+ +FR  ++  ++ +VV Y++++    K    E A +L+ 
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQ 243

Query: 534 EMTKEGIRPNVVTYNSIIDAFGR 556
           EM   GI PN +TY++II  +G+
Sbjct: 244 EMQSRGIEPNAITYSTIISIWGK 266



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/404 (25%), Positives = 197/404 (48%), Gaps = 13/404 (3%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKVDLA 212
           D YT+  L+   G  G +  A+      +++ E+   +G L   S +I +  +L     A
Sbjct: 8   DRYTYSTLITYFGKEGLFDDALSW----LQKMEQDRVRGDLVLYSNLIELSRKLCDYSKA 63

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
            +IF      G    +  ++++I+ +G++   +EA S+ + M+   + P+ V+Y A++  
Sbjct: 64  ISIFSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTM 123

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
             +    F   + +F +M       D  T N ++ V  + G+ + A  LF  M   GI+ 
Sbjct: 124 YVENK-KFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEP 182

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           ++ +YNTLL           A  +   M  K+I  NVVTY++M+  Y K    + A N+ 
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLI 242

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            EM+  GI  + ++Y+T++SI+ K+G+ + A ++ +++ SSGI  D V Y  ++  Y + 
Sbjct: 243 QEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYERA 302

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G     +R+  ++K    +P+ +   T I + ++ G  +EA  +FR+   AG   D+ ++
Sbjct: 303 GLVSHAKRLLHELK----TPDNIPRDTAIHILARAGRIEEATWVFRQAIDAGEVKDITVF 358

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             +ID   K     + V + D+M       +      +++A+G+
Sbjct: 359 ERMIDLFSKYKKYSNIVEVFDKMRGLEYFSDSYVIALVLNAYGK 402



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 187/371 (50%), Gaps = 11/371 (2%)

Query: 171 EWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKVDLAKNIFETALNEGYGNTV 228
           ++SKAI  F+    R +R      L   ++MI++ G+      A+++       G     
Sbjct: 59  DYSKAISIFS----RLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDT 114

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
            +++AL++ Y  +    EA+SVF  M+      +L T N +ID  G+ G+  K   ++F 
Sbjct: 115 VSYTALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMA-KEADKLFW 173

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M + G++P+ +++N+LL V     L+  A +LF  M  + I+Q++ TYN+++    K  
Sbjct: 174 SMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTL 233

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           + + A  ++ EM ++ I PN +TYST+I  + K G+LD A  +F +++  GI +D+V Y 
Sbjct: 234 EHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQ 293

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T++  Y + G    A  +  E+++     D +  +  +    + G+ +E   +F Q    
Sbjct: 294 TMIVAYERAGLVSHAKRLLHELKTP----DNIPRDTAIHILARAGRIEEATWVFRQAIDA 349

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
               ++  +  +ID++SK   Y   +++F + +     +D  + + +++A  K    E A
Sbjct: 350 GEVKDITVFERMIDLFSKYKKYSNIVEVFDKMRGLEYFSDSYVIALVLNAYGKLHEFEKA 409

Query: 529 VSLLDEMTKEG 539
             +  EM  EG
Sbjct: 410 NDVYTEMQDEG 420



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 170/349 (48%), Gaps = 31/349 (8%)

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           R +  D +TY+TL+    K    D A   + +M    +  ++V YS +I+   K      
Sbjct: 3   RALSPDRYTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSK 62

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A+++FS +K  GI  D V YN++++++ K   F EA  +  EM ++G+  D V+Y ALL 
Sbjct: 63  AISIFSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLT 122

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
            Y +  K+ E   +F +M+      +L T + +IDVY + G+ KEA ++F   ++ G++ 
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEP 182

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           +VV Y+ L+       L   A+ L   M ++ I  NVVTYNS++  +G++          
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTL--------- 233

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
                 + E AN + +     + ++    T + II ++G++       GK +   R  IL
Sbjct: 234 ------EHEKAN-NLIQEMQSRGIEPNAITYSTIISIWGKV-------GKLD---RAAIL 276

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
                F+K+    I+ + V +  ++ A  R      A  LL EL+  DN
Sbjct: 277 -----FEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLHELKTPDN 320


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 183/346 (52%), Gaps = 3/346 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+ D AK + E     G   + + ++ LI  + +    +EA  +   M      P +VTY
Sbjct: 256 GEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTY 315

Query: 267 NAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N ++   C  G V         D M+   + PD +++N+L+   SR G +  A  LF+E+
Sbjct: 316 NTIMYSLCRLGRVS--DARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSEL 373

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
             + +   + TYNTL+D  C+   +D+A  +  +M    + P+VVT++ ++ G+ + G L
Sbjct: 374 RSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNL 433

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             A  +F EM   G+  D ++Y T +    KLG   +A  + +EM++ G   D +TYN L
Sbjct: 434 PMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVL 493

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K G +D+   + ++M+ + + P+ +TY+++I  +   GL ++A ++F +  + G+
Sbjct: 494 INGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGI 553

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
              VV Y+ LI +    G ++ A    DEM  +G+ PNV+TYN++I
Sbjct: 554 HPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALI 599



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 207/420 (49%), Gaps = 18/420 (4%)

Query: 140 VSLGDILKKFEFKLCGADD--YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS 197
           V + D+++ F    C  +D  Y  L+  L  +GE+ +A +         E+ +  G   S
Sbjct: 227 VEVLDVMRMFG---CDPNDVSYNVLVNGLSGKGEFDRAKELI-------EQMSMLGLKVS 276

Query: 198 A-----MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           A     +I    +    + A ++    L  G   TV  ++ ++ +  R G   +A    +
Sbjct: 277 AHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLD 336

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            M   +L P+LV+YN +I    + G +F   + +F ++    + P  +T+N+L+    R 
Sbjct: 337 VMVNEDLMPDLVSYNTLIYGYSRLG-NFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRT 395

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  + A+ + ++M+  G+  D+ T+  L+   C+   + +A E+  EM ++ + P+ + Y
Sbjct: 396 GNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAY 455

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T I G  K G    A  M  EMK  G   D ++YN +++   KLG F++A  + ++M  
Sbjct: 456 TTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRL 515

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            GI  D VTY +++  +   G   +   +F  M    + P+++TY+ LI  Y+  G    
Sbjct: 516 EGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDF 575

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A + F E +  G+  +V+ Y+ALI  LCK  +++ A +L  EM  +G+ PN  TY  +I+
Sbjct: 576 AKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILIN 635



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 183/357 (51%), Gaps = 40/357 (11%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L RLG+V  A+   +  +NE     + +++ LI  Y R G   EA+ +F+ ++  NL P+
Sbjct: 322 LCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPS 381

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARN 320
           +VTYN +ID  C  G +D    ++  DDM+++G+ PD +TF  L+   C  G L   A+ 
Sbjct: 382 VVTYNTLIDGGCRTGNLDIAKGMK--DDMIKHGLCPDVVTFTILVRGFCQMGNL-PMAKE 438

Query: 321 LFNEMVHRGIDQD-----------------------------------IFTYNTLLDAIC 345
           LF+EM+ RG+  D                                   + TYN L++ +C
Sbjct: 439 LFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLC 498

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K    D A E++ +M  + I P+ VTY+++I  +  +G L  A  +FS+M   GI    V
Sbjct: 499 KLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVV 558

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y  ++  YA  GR + A     EM+  G+  + +TYNAL+ G  K+   D    +F +M
Sbjct: 559 TYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEM 618

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           ++  VSPN  TY+ LI+  S    +++A++++++     +K D   +SAL+  L K+
Sbjct: 619 ESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKD 675



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 221/479 (46%), Gaps = 58/479 (12%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC-GKGGVD------ 279
           T+  F+ ++ +  + G    A+ V + M+ +   PN V+YN +++   GKG  D      
Sbjct: 206 TIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELI 265

Query: 280 ---------------------------FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
                                      F+   ++  +ML  G  P  +T+N+++    R 
Sbjct: 266 EQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRL 325

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G    AR   + MV+  +  D+ +YNTL+    +      A  + +E+ +KN+ P+VVTY
Sbjct: 326 GRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTY 385

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T+IDG  + G LD A  M  +M   G+  D V++  ++  + ++G    A  +  EM S
Sbjct: 386 NTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLS 445

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G++ D + Y   + G  K G   +   M E+MKA+   P+L+TY+ LI+   K G + +
Sbjct: 446 RGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDD 505

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A ++ ++ +  G+  D V Y+++I A   +GL+  A  +  +M K+GI P+VVTY  +I 
Sbjct: 506 ANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIH 565

Query: 553 AF---GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
           ++   GR    +   D+++ D G        +A+           G     ++ V   L 
Sbjct: 566 SYAVRGRLDFAKKYFDEMQ-DKGVSPNVITYNALI---------YGLCKENMMDVAYNLF 615

Query: 610 AEKAGQGKKENRCRQEILC-----------ILGVFQKMHKLKIKPNVVTFSAILNACSR 657
           AE   +G   N+    IL             L +++ M   +IKP+  T SA++   S+
Sbjct: 616 AEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSK 674



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 178/364 (48%), Gaps = 3/364 (0%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           KL   +I +  +   ++    +F   +N G    V   + ++          E   V++ 
Sbjct: 138 KLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSV 197

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           M +  ++P +VT+N ++D+ C +G V     VE+ D M   G  P+ +++N L+   S  
Sbjct: 198 MIKCQIRPTIVTFNTMMDSRCKEGEVG--RAVEVLDVMRMFGCDPNDVSYNVLVNGLSGK 255

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G ++ A+ L  +M   G+     TYN L+   CK    + A ++  EM  +   P VVTY
Sbjct: 256 GEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTY 315

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T++    + GR+ DA      M    +  D VSYNT++  Y++LG F EALL+  E+ S
Sbjct: 316 NTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRS 375

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
             +    VTYN L+ G  + G  D  + M + M    + P+++T++ L+  + + G    
Sbjct: 376 KNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPM 435

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A ++F E    GLK D + Y+  I    K G    A  + +EM  EG  P+++TYN +I+
Sbjct: 436 AKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLIN 495

Query: 553 AFGR 556
              +
Sbjct: 496 GLCK 499



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 192/388 (49%), Gaps = 31/388 (7%)

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +F  M+ NG+ PD    N +L +     +      +++ M+   I   I T+NT++D+ C
Sbjct: 159 VFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRC 218

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  ++  A E++  M      PN V+Y+ +++G +  G  D A  +  +M  LG+ +   
Sbjct: 219 KEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAH 278

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +YN ++  + K   FEEA  + +EM   G     VTYN ++    + G+  + RR  + M
Sbjct: 279 TYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVM 338

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             + + P+L++Y+TLI  YS+ G + EA+ +F E +   L   VV Y+ LID  C+ G +
Sbjct: 339 VNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNL 398

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           + A  + D+M K G+ P+VVT+  ++  F +             +L   KE    D M S
Sbjct: 399 DIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMG-----------NLPMAKEL--FDEMLS 445

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
           +  K    A  T     ++ G+L   K G   K            G+ ++M      P++
Sbjct: 446 RGLKPDCIAYTT-----RIVGEL---KLGNPSKA----------FGMKEEMKAEGFPPDL 487

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRL 673
           +T++ ++N   +  +F+DA+ L++++RL
Sbjct: 488 ITYNVLINGLCKLGNFDDANELVQKMRL 515



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 161/326 (49%), Gaps = 3/326 (0%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           +V     LI  + +    ++ + VF  M    L P++   N V+       +    V E+
Sbjct: 136 SVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSM-VNEVEEV 194

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +  M++  ++P  +TFN+++ + C  G +  A   + + M   G D +  +YN L++ + 
Sbjct: 195 YSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVE-VLDVMRMFGCDPNDVSYNVLVNGLS 253

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
              + D A E++ +M    +  +  TY+ +I G+ K    ++A ++  EM   G     V
Sbjct: 254 GKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVV 313

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +YNT++    +LGR  +A      M +  +  D V+YN L+ GY + G + E   +F ++
Sbjct: 314 TYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSEL 373

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           ++  + P+++TY+TLID   + G    A  +  +  + GL  DVV ++ L+   C+ G +
Sbjct: 374 RSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNL 433

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSII 551
             A  L DEM   G++P+ + Y + I
Sbjct: 434 PMAKELFDEMLSRGLKPDCIAYTTRI 459



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 135/257 (52%), Gaps = 1/257 (0%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++G + +AK +F+  L+ G      A++  I    + G   +A  +   MK     P+L+
Sbjct: 429 QMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLI 488

Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
           TYN +I+   K G +F    E+   M   G+ PD +T+ S++      GL   A  +F++
Sbjct: 489 TYNVLINGLCKLG-NFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSD 547

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+ +GI   + TY  L+ +     ++D A +   EM  K +SPNV+TY+ +I G  K   
Sbjct: 548 MLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENM 607

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +D A N+F+EM+  G+  ++ +Y  +++  + L  +++AL + K+M    I+ D+ T++A
Sbjct: 608 MDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSA 667

Query: 445 LLGGYGKQGKYDEVRRM 461
           L+    K  K   V R+
Sbjct: 668 LMKHLSKDYKLLAVLRL 684



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/282 (20%), Positives = 121/282 (42%), Gaps = 37/282 (13%)

Query: 397 FLGIGLDRVSYNTV------LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
            +GIG  R S  +V      + ++AK    E+ L+V  +M ++G+  D    N +L    
Sbjct: 124 LVGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLK 183

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
            +   +EV  ++  M    + P ++T++T++D   K G    A+++    +  G   + V
Sbjct: 184 DKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDV 243

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y+ L++ L   G  + A  L+++M+  G++ +  TYN +I  F +    E   +D+ R+
Sbjct: 244 SYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFE-EANDLRRE 302

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
           +                       GR     +  +  ++      G+  +  R       
Sbjct: 303 M----------------------LGRGALPTVVTYNTIMYSLCRLGRVSDARRY------ 334

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                M    + P++V+++ ++   SR  +F +A +L  ELR
Sbjct: 335 --LDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELR 374



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 123/281 (43%), Gaps = 33/281 (11%)

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           + L+  + K+   ++   +F +M  + + P++   + ++ +     +  E  +++    +
Sbjct: 141 DLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIK 200

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
             ++  +V ++ ++D+ CK G V  AV +LD M   G  PN V+YN +++  G S   E 
Sbjct: 201 CQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVN--GLSGKGEF 258

Query: 563 TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
              D  ++L +Q     L             +  T N +I+ F      K    ++ N  
Sbjct: 259 ---DRAKELIEQMSMLGLKV-----------SAHTYNPLIRGFC-----KKEMFEEANDL 299

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA 682
           R+E+L    +          P VVT++ I+ +  R     DA   L+ +   D     V+
Sbjct: 300 RREMLGRGAL----------PTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVS 349

Query: 683 HG-LLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
           +  L+ GY R   + +AL LF E++  +   +   YN L D
Sbjct: 350 YNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLID 390


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 220/475 (46%), Gaps = 21/475 (4%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V  ++ LI    +    QEA+     M      P+  TYN +ID   K  +  +   E+ 
Sbjct: 258 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM-VQEATELL 316

Query: 288 DDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
            D +  G  PD++T+ SL+  +C+ G + E A  LFNE   +GI  DI  YN+L+  +C 
Sbjct: 317 KDAVFKGFVPDQVTYCSLINGLCAEGDV-ERALELFNEAQAKGIKPDIVVYNSLVKGLCL 375

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +  A ++M EM  +   P++ TY+ +I+G  K G + DA  + ++    G   D  +
Sbjct: 376 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 435

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +NT++  Y K  + + AL + + M   GI  D +TYN++L G  K GK +EV   F++M 
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 495

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
                PN +TY+ LI+ + +    +EA ++  +  Q GL  D V ++ LI   C+NG +E
Sbjct: 496 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 555

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN------L 580
            A  L  ++ ++G      T+N++I AF             +  L K   + +      +
Sbjct: 556 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 615

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQ-LVAEKAGQGKKENR--CRQEILCILGVFQKMH 637
           D  C   + D     R    ++++  +  +   +  G+  N       +   +G+   M 
Sbjct: 616 DGSCKTANVD-----RAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 670

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDN 692
           K+ + P VV    ILNA  +        +L+E+L    +  Y     L  G RDN
Sbjct: 671 KIGVVPEVV--DTILNADKK--EIAAPKILVEDLMKKGHISYPTYEVLHEGVRDN 721



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 189/352 (53%), Gaps = 5/352 (1%)

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
           ++  V  A  + + A+ +G+      + +LI+     G  + A+ +FN  +   +KP++V
Sbjct: 305 KISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIV 364

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
            YN+++   C +G +   H +++ ++M   G  PD  T+N ++  +C  G + +A   + 
Sbjct: 365 VYNSLVKGLCLQGLI--LHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATV-VM 421

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           N+ + +G   D+FT+NTL+D  CK  ++D A +++  M    I+P+ +TY+++++G  KA
Sbjct: 422 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 481

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G++++    F EM   G   + ++YN ++  + +  + EEA  V  +M   G+  DAV++
Sbjct: 482 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 541

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           N L+ G+ + G  +    +F++++    S    T++TLI  +S       A +IF E   
Sbjct: 542 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 601

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            G +AD   Y  LID  CK   V+ A   L EM K+G  P++ T+  +I++ 
Sbjct: 602 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 653



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 240/517 (46%), Gaps = 47/517 (9%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L  A I    R G++  A + FE            A++A++ A   + Y  +A  V+  M
Sbjct: 55  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 114

Query: 255 KRYNLKPNLVTYNAVIDA-C----------------GKGGVDFKHVV------------- 284
               + P+L T+   + + C                 +G V +  VV             
Sbjct: 115 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDAR 174

Query: 285 EIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
           ++FD ML   V P+   FN +L A+C RG + EA   L  +++ RG+  ++FTYN  +  
Sbjct: 175 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL-LLGKVIQRGMSINLFTYNIWIRG 233

Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
           +C+  ++  A  ++  M A  + P+VVTY+T+I G  K     +A++    M   G   D
Sbjct: 234 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 292

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             +YNT++  Y K+   +EA  + K+    G   D VTY +L+ G   +G  +    +F 
Sbjct: 293 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 352

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           + +A  + P+++ Y++L+      GL   A+Q+  E  + G   D+  Y+ +I+ LCK G
Sbjct: 353 EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMG 412

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKESANLD 581
            +  A  ++++   +G  P+V T+N++ID + +    +  +  VER  + G   ++   +
Sbjct: 413 NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 472

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK------KENRCRQEILCILG-VFQ 634
           ++ +     + +AG+  N++ + F +++ +             EN CR   +     V  
Sbjct: 473 SVLN----GLCKAGKV-NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 527

Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           KM +  + P+ V+F+ ++    R    E A +L ++L
Sbjct: 528 KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKL 564



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 174/357 (48%), Gaps = 5/357 (1%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++I+ L   G V+ A  +F  A  +G    +  +++L+      G    A+ V N M   
Sbjct: 333 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 392

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWE 316
              P++ TYN VI+   K G +      + +D +  G  PD  TFN+L+   C R  L +
Sbjct: 393 GCHPDIQTYNIVINGLCKMG-NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL-D 450

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           +A  L   M   GI  D  TYN++L+ +CK  +++   E   EM  K   PN +TY+ +I
Sbjct: 451 SALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 510

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           + + ++ ++++A  +  +M   G+  D VS+NT++  + + G  E A L+ +++E  G  
Sbjct: 511 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYS 570

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
             A T+N L+G +  +       ++F++M +     +  TY  LID   K      A   
Sbjct: 571 ATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMH 630

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             E  + G    +  +  +I++L  N  V  AV ++  M K G+ P VV  ++I++A
Sbjct: 631 LVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNA 685


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 179/334 (53%), Gaps = 1/334 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G    V  ++ LI    + G    A ++F  M R  L PN  TY+ +++   K G+  + 
Sbjct: 188 GLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQ-RE 246

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             +++++M R+G+ P+   +N L++     G+ + A  +F EM  +GI   + TYN L+ 
Sbjct: 247 GFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIG 306

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            +C+G +   A +++ ++    +SPN+VTY+ +I+G+    ++D A+ +F+++K  G+  
Sbjct: 307 GLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSP 366

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
             V+YNT+++ Y+K+     AL + KEME   I    VTY  L+  + +    ++   M 
Sbjct: 367 TLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMH 426

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
             M+   + P++ TYS L+      G  KEA ++F+   +  L+ + V+Y+ +I   CK 
Sbjct: 427 SLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKE 486

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           G    A+ LL+EM + G+ PNV ++ S I    R
Sbjct: 487 GSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCR 520



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 179/345 (51%), Gaps = 3/345 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G V LAKN+F      G     + +S L++ + + G  +E   ++ +MKR  + PN   Y
Sbjct: 207 GNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAY 266

Query: 267 NAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +I + C  G VD     ++F +M   G+    +T+N L+    RG  +  A  L +++
Sbjct: 267 NCLISEYCNDGMVD--KAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV 324

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              G+  +I TYN L++  C   +MD A  +  ++ +  +SP +VTY+T+I GY+K   L
Sbjct: 325 NKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENL 384

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             AL++  EM+   I   +V+Y  ++  +A+L   E+A  +   ME SG+  D  TY+ L
Sbjct: 385 AGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVL 444

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           L G    G   E  ++F+ +    + PN + Y+T+I  Y K G    A+++  E  Q+G+
Sbjct: 445 LHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGM 504

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
             +V  + + I  LC++   + A  LL +M   G++P+V  Y  +
Sbjct: 505 VPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 176/332 (53%), Gaps = 1/332 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y+F  +I     +GY  +   +   ++ + L PN+V Y  +ID C K G +      +F 
Sbjct: 159 YSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDG-NVMLAKNLFC 217

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M R G+ P+  T++ L+    + GL      ++  M   GI  + + YN L+   C   
Sbjct: 218 KMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDG 277

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            +D AF++ AEM  K I+  V+TY+ +I G  +  +  +A+ +  ++  +G+  + V+YN
Sbjct: 278 MVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYN 337

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            +++ +  + + + A+ +  +++SSG+    VTYN L+ GY K         + ++M+  
Sbjct: 338 ILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 397

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
           C++P+ +TY+ LID +++    ++A ++    +++GL  DV  YS L+  LC +G ++ A
Sbjct: 398 CIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEA 457

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
             L   + +  ++PN V YN++I  + +  ++
Sbjct: 458 SKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSS 489



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 205/455 (45%), Gaps = 26/455 (5%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +  +++AY  S    +A++  + M      P   T+N ++    +    F     IF++ 
Sbjct: 92  YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNY-FDKAWWIFNE- 149

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           L++ V  D  +F  ++  C   G +     L   +   G+  ++  Y TL+D  CK   +
Sbjct: 150 LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNV 209

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
            LA  +  +M    + PN  TYS +++G+ K G   +   M+  MK  GI  +  +YN +
Sbjct: 210 MLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCL 269

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +S Y   G  ++A  V  EM   GI    +TYN L+GG  +  K+ E  ++  ++    +
Sbjct: 270 ISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           SPN++TY+ LI+ +        A+++F + K +GL   +V Y+ LI    K   +  A+ 
Sbjct: 330 SPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTE--CTVDDVERDLGKQKE----SANLDAMC 584
           L+ EM +  I P+ VTY  +IDAF R   TE  C +  +    G   +    S  L  +C
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLC 449

Query: 585 SQDD--------KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
              +        K + E     N +I  +  ++     +G      R        +  +M
Sbjct: 450 VHGNMKEASKLFKSLGEMHLQPNSVI--YNTMIHGYCKEGSSYRALR--------LLNEM 499

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            +  + PNV +F + +    R   +++A +LL ++
Sbjct: 500 VQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQM 534



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 2/153 (1%)

Query: 186 EERKNDQGKLA-SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
           EER     K+  + +I    RL   + A  +       G    VY +S L+      G  
Sbjct: 395 EERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNM 454

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           +EA  +F S+   +L+PN V YN +I    K G  ++  + + ++M+++G+ P+  +F S
Sbjct: 455 KEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYR-ALRLLNEMVQSGMVPNVASFCS 513

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            + +  R   W+ A  L  +M++ G+   +  Y
Sbjct: 514 TIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 194/358 (54%), Gaps = 6/358 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           +G LG+V     I++  LNEG    V + S LI  + ++G   EA  +F  + +   +P+
Sbjct: 390 IGDLGRV---IQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPS 446

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
           ++TY+A+I    K G + +    +++DM++   +PD I ++ L+  +C +G + +A R  
Sbjct: 447 ILTYSALIAGFCKSG-NLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALR-F 504

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           F + V+RG+  ++FT NTLLD+ C+   +  A ++   M   NI  + VTY+ +I G A+
Sbjct: 505 FFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQ 564

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            GR+D+AL +F +M       D ++Y T++    KL +    L +   M  + +  D   
Sbjct: 565 FGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAI 624

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN L+  + ++G  +    +F  +      P++ T++T+I  Y       +A+Q+F +  
Sbjct: 625 YNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMT 684

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
              L+ + + ++ LIDA C+ G ++ A+ +  +M +EG  PN+VTY+ +I  + +S +
Sbjct: 685 SEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQS 742



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 157/710 (22%), Positives = 299/710 (42%), Gaps = 95/710 (13%)

Query: 17  QNHQYPHNHLKNNHHRQSHHPSSRPHWTSHKVSLTKPPLSPSPRNAPKPAATSTTVAPNP 76
           +N    H  +K  H++Q+  P        + + L+K  L   P            ++  P
Sbjct: 49  KNWSLIHQIVKAFHNQQNPKPL-------NPILLSKLQLYHVP---------DVIISLQP 92

Query: 77  KPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFA 136
           KPF ++     ++S      S   +  F + +H       + +R + V ++    +  F 
Sbjct: 93  KPFSAIRFFEWAESFFISPLS---APSFCALLHVLLQN-QLFSRAACVFDK---FIMQFG 145

Query: 137 RDDVSLGDILKKFEFKLCGADD------YTFLLRELGNRGEWSKAIQCFAFAVKR----- 185
            D     D L  F    C  D       Y FL+     +G + K++  F     +     
Sbjct: 146 ND----YDTLDAFRDGFCDLDSTNHSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVS 201

Query: 186 -----------------EERKNDQGKLASAMIS--------ILGRL---GKVDLAKNIFE 217
                            E   +  G+L SAM          ++ R    G+V++     +
Sbjct: 202 PNVVYLLLGSLIDSHCVEVIVDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHK 261

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKG 276
             +  G+G  +   + ++           A   FN + R   KPN+VT++ +IDA C +G
Sbjct: 262 ALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEG 321

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
            +D   V  +FD M  NGV PD I ++ L+    + G  E  + L    + +GI  D+  
Sbjct: 322 NLDKAFV--LFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVG 379

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           +++ +DA  K   +    +I   M  + ISPNVV+ S +I G+ + GR+ +A  +F ++ 
Sbjct: 380 FSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQIL 439

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
            LG     ++Y+ +++ + K G   +   + ++M       D + Y+ L+ G  KQG   
Sbjct: 440 KLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVG 499

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           +  R F Q     +SPN+ T +TL+D + +      AM+++       +KAD V Y+ LI
Sbjct: 500 DALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILI 559

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGRSATTECTVDDVERD--- 570
               + G V+ A+ L  +M K+  +P+V+TY ++ID      +S+   C  D + ++   
Sbjct: 560 KGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVA 619

Query: 571 ---------LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
                    +       +L+A        V+   + D   +  F  ++       + ++ 
Sbjct: 620 PDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPD---VFTFNTMICCYCNFKRLDDA 676

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            +        +F KM   +++PN +TF+ +++A  R    +DA ++  ++
Sbjct: 677 VQ--------LFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKM 718



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 175/351 (49%), Gaps = 8/351 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+ L + G V  A   F  A+N G    V+  + L+ ++ R      A+ V+  M  
Sbjct: 486 SVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGM 545

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            N+K + VTY  +I    KG   F  V E   +F  ML+   +PD IT+ +L+    +  
Sbjct: 546 LNIKADTVTYTILI----KGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLK 601

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
              A   +F+ M    +  DI  YN L++   +   ++ A  +   +  +   P+V T++
Sbjct: 602 KSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFN 661

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           TMI  Y    RLDDA+ +F++M    +  + +++  ++  + + GR ++A+L+  +M   
Sbjct: 662 TMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEE 721

Query: 434 GIRKDAVTYNALLGGYGK-QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           G   + VTY+ L+ GY K Q   +   +++ +M  + ++PN+++YS LID   K GL KE
Sbjct: 722 GPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKE 781

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           A   FR      L  DV+ Y+ LI   CK G +  A+ L D M    + P+
Sbjct: 782 ASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 159/358 (44%), Gaps = 39/358 (10%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L  +G    A++ F  AV R    N      + ++    RL  +  A  ++  
Sbjct: 485 YSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFT--LNTLLDSFCRLKCIVGAMKVYYL 542

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                       ++ LI    + G   EA+ +F  M + + KP+++TY  +ID   K   
Sbjct: 543 MGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKK 602

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
               +  IFD M +N V PD   +N L+ + SR G  EAA  LF  +V RG   D+FT+N
Sbjct: 603 SSAGLC-IFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFN 661

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           T++   C   ++D A ++ A+M ++ + PN +T++ +ID + + GR+DDA+ MFS+M   
Sbjct: 662 TMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEE 721

Query: 399 G------------------------------------IGLDRVSYNTVLSIYAKLGRFEE 422
           G                                    I  + VSY+ ++    K G  +E
Sbjct: 722 GPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKE 781

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           A    +      +  D + Y  L+ GY K G+  E   +++ M  + ++P+     TL
Sbjct: 782 ASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTL 839


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 170/306 (55%), Gaps = 3/306 (0%)

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL 306
           A  +F+ M R  + P++VTYN +I+AC   G   K   E++D M+   + P+ IT+ S++
Sbjct: 162 AWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAK-AQEMWDQMVARQIDPNVITYTSMI 220

Query: 307 AV-CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
            V C  G + +A R LF+ M   G+  + +TYN L+   C+G  ++ AF +  E+    +
Sbjct: 221 CVLCEEGCIGDAER-LFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGL 279

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            PN V ++T+IDG+ KA R  +A +MF +M   G+      YN+++    + G  +EAL 
Sbjct: 280 IPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALS 339

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + +EM   G+  D  T + ++ G    G+     R  E ++ D V+ N   Y+ LID Y 
Sbjct: 340 LYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYC 399

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           + G  +EA+       + G++ +VV YS+LID   K G ++ A+++  EM  +GI PNVV
Sbjct: 400 RNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVV 459

Query: 546 TYNSII 551
           TY ++I
Sbjct: 460 TYTALI 465



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 186/386 (48%), Gaps = 45/386 (11%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  +F+  L  G   +V  ++ LI+A    G   +A  +++ M    + PN++TY ++I 
Sbjct: 162 AWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMIC 221

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
             C +G +       +FD M   G++P++ T+N L++   +G    +A  L+ E+++ G+
Sbjct: 222 VLCEEGCIGDAE--RLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGL 279

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             +   + TL+D  CK  +   A ++  +MP   ++P V  Y++++DG  ++G   +AL+
Sbjct: 280 IPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALS 339

Query: 391 MFSEM-----------------------------KFL------GIGLDRVSYNTVLSIYA 415
           ++ EM                             +FL      G+ L+  +YN ++  Y 
Sbjct: 340 LYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYC 399

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           + G  EEAL  C  M   G+  + V+Y++L+ G+ K GK      ++ +M A  + PN++
Sbjct: 400 RNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVV 459

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY+ LI  ++K G    A +  +E  + G+  + +  S L+D LC+   V+ AV  +  M
Sbjct: 460 TYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFV--M 517

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTE 561
              GI+     Y+ I   F    T E
Sbjct: 518 EHSGIK-----YSDIHSFFSNFTTEE 538



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 172/351 (49%), Gaps = 18/351 (5%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           V+ A  +++  LN G       F+ LI  + ++    EA  +F  M R+ + P +  YN+
Sbjct: 264 VNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNS 323

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           ++D   + G D +  + ++ +M R G+ PD  T + ++     GG  + A      +   
Sbjct: 324 LMDGAFRSG-DAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVRED 382

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G++ +   YN L+D  C+   ++ A      M    + PNVV+YS++IDG++K G++  A
Sbjct: 383 GVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIA 442

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           + +++EM   GI  + V+Y  ++  +AK G  + A    KEM  +GI  +A+T + L+ G
Sbjct: 443 MAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDG 502

Query: 449 YGKQG---------------KYDEVRRMFEQM--KADCVSPNLLTYSTLIDVYSKGGLYK 491
             ++                KY ++   F     + + + PN   Y TLI      G + 
Sbjct: 503 LCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHY 562

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
           EA ++F   +++G+ +D   Y+ LI   C  G V +A+ L  +M K G++P
Sbjct: 563 EAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 176/372 (47%), Gaps = 18/372 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           ++MI +L   G +  A+ +F+     G     Y ++ L+S + +      A  ++  +  
Sbjct: 217 TSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLN 276

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L PN V +  +ID   K    F    ++F DM R GV P    +NSL+    R G  +
Sbjct: 277 SGLIPNAVVFTTLIDGFCKAK-RFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQ 335

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +L+ EM   G+  D FT + ++  +C G Q+ +A   +  +    ++ N   Y+ +I
Sbjct: 336 EALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALI 395

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y + G L++AL   + M  +G+  + VSY++++  ++KLG+ + A+ +  EM + GI 
Sbjct: 396 DEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIE 455

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID-------------- 482
            + VTY AL+ G+ K G  D   R  ++M  + +SPN +T S L+D              
Sbjct: 456 PNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRF 515

Query: 483 VYSKGGL-YKEAMQIFREF--KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           V    G+ Y +    F  F  ++  L  +  +Y  LI  L  +G    A  L   M K G
Sbjct: 516 VMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSG 575

Query: 540 IRPNVVTYNSII 551
           +  +  TY  +I
Sbjct: 576 MISDSFTYTLLI 587



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 179/357 (50%), Gaps = 35/357 (9%)

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           WE    LF+EM+ RG+   + TYNTL++A      +  A E+  +M A+ I PNV+TY++
Sbjct: 163 WE----LFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTS 218

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           MI    + G + DA  +F  MK  G+  ++ +YN ++S + +      A ++ +E+ +SG
Sbjct: 219 MICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSG 278

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  +AV +  L+ G+ K  ++ E + MF  M    V+P +  Y++L+D   + G  +EA+
Sbjct: 279 LIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEAL 338

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +++E  + GL  D    S ++  LC  G ++ A   L+ + ++G+  N   YN++ID +
Sbjct: 339 SLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEY 398

Query: 555 GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
            R+   E  +                 A C++    + E G   N  +  +  L+   + 
Sbjct: 399 CRNGNLEEAL-----------------ATCTR----MTEVGVEPN--VVSYSSLIDGHSK 435

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            GK +          + ++ +M    I+PNVVT++A+++  ++    + A    +E+
Sbjct: 436 LGKMQ--------IAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEM 484



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 141/316 (44%), Gaps = 18/316 (5%)

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P +   + ++DG  KA R   A  +F EM   G+    V+YNT+++     G   +A  +
Sbjct: 141 PALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEM 200

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
             +M +  I  + +TY +++    ++G   +  R+F+ MK   + PN  TY+ L+  + +
Sbjct: 201 WDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQ 260

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
           G     A  +++E   +GL  + V+++ LID  CK      A  +  +M + G+ P V  
Sbjct: 261 GDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPV 320

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG 606
           YNS++D   RS        D +  L   +E   L     +    +   G  D   I+V  
Sbjct: 321 YNSLMDGAFRSG-------DAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAA 373

Query: 607 QLVAEKAGQGKKENR----------CRQEIL-CILGVFQKMHKLKIKPNVVTFSAILNAC 655
           + +      G   N           CR   L   L    +M ++ ++PNVV++S++++  
Sbjct: 374 RFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGH 433

Query: 656 SRCNSFEDASMLLEEL 671
           S+    + A  +  E+
Sbjct: 434 SKLGKMQIAMAIYTEM 449



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 130/289 (44%), Gaps = 30/289 (10%)

Query: 153 LCGADDYT--FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVD 210
           LC  D++T   ++R L + G+   A + F   V RE+  N      +A+I    R G ++
Sbjct: 349 LC-PDEFTCSIVVRGLCDGGQIQVAAR-FLEGV-REDGVNLNAAAYNALIDEYCRNGNLE 405

Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
            A          G    V ++S+LI  + + G  Q A++++  M    ++PN+VTY A+I
Sbjct: 406 EALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALI 465

Query: 271 DACGK-GGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHR 328
               K GG+D         +M+ NG+ P+ IT + L+  +C    + +A R +   M H 
Sbjct: 466 HGHAKNGGID--AAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFV---MEHS 520

Query: 329 GID-QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           GI   DI ++ +                   E P   + PN   Y T+I G    G+  +
Sbjct: 521 GIKYSDIHSFFSNFTT--------------EEEP---LIPNSAIYMTLIYGLYLDGQHYE 563

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           A  +FS M+  G+  D  +Y  ++     LG    A+++  +M   G++
Sbjct: 564 AGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVK 612


>gi|255661192|gb|ACU25765.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
          Length = 426

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 221/444 (49%), Gaps = 36/444 (8%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y +S LI+ +G+ G    A+S    M++  +  +LV Y+ +I+   K   D+   + IF 
Sbjct: 10  YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKL-CDYSKAISIFS 68

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            + R+G  PD + +NS++ V  +  L+  AR+L NEM   G+  D  +Y TLL    +  
Sbjct: 69  RLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVENK 128

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +   A  + AEM       ++ T + MID Y + G   +A  +F  M+ +GI  + VSYN
Sbjct: 129 RFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYN 188

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+L +Y     F EA+ + + M+   I ++ VTYN+++  YGK  ++++   + ++M+  
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + PN +TYST+I ++ K G    A  +F++ + +G++ D VLY  +I A  + GLV  A
Sbjct: 249 GIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHA 308

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
             LL E+     RP+ +  ++ I     +              G+ +E+  +        
Sbjct: 309 KRLLHELK----RPDNIPRDTAIHILAAA--------------GRJEEATWV-------F 343

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
           +   +AG   +  I VF +L+   +   K  N        ++ VF KM + +  P+    
Sbjct: 344 RQAIDAGEVKD--ITVFERLIHLFSKYKKYXN--------VVEVFDKMRERRYFPDSNVI 393

Query: 649 SAILNACSRCNSFEDASMLLEELR 672
           + +LNA  + + FE A+ +  E++
Sbjct: 394 ALVLNAYGKLHEFEKANSVYMEMQ 417



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 146/263 (55%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
            + PDR T+++L+    + GL++AA +   +M    +  D+  Y+ L++   K      A
Sbjct: 4   ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             I + +     +P++V Y++MI+ + KA    +A ++ +EM+  G+  D VSY T+L++
Sbjct: 64  ISIFSRLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLTM 123

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           + +  RF EAL V  EM       D  T N ++  YG+ G   E  ++F  M+   + PN
Sbjct: 124 HVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPN 183

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           +++Y+TL+ VY    L+ EA+ +FR  ++  ++ +VV Y++++    K    E A +L+ 
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQ 243

Query: 534 EMTKEGIRPNVVTYNSIIDAFGR 556
           EM   GI PN +TY++II  +G+
Sbjct: 244 EMQNRGIEPNSITYSTIISIWGK 266



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 196/404 (48%), Gaps = 13/404 (3%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKVDLA 212
           D YT+  L+   G  G +  A+      +++ E+    G L   S +I +  +L     A
Sbjct: 8   DRYTYSTLITHFGKEGLFDAALSW----LQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
            +IF      G+   + A++++I+ +G++   +EA S+ N M+   + P+ V+Y  ++  
Sbjct: 64  ISIFSRLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLTM 123

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
             +    F   + +F +M       D  T N ++ V  + G+ + A  LF  M   GI+ 
Sbjct: 124 HVENK-RFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEP 182

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           ++ +YNTLL           A  +   M  KNI  NVVTY++M+  Y K    + A N+ 
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            EM+  GI  + ++Y+T++SI+ K+G+ + A ++ +++ +SG+  D V Y  ++  Y + 
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERA 302

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G     +R+  ++K     P+ +   T I + +  G  +EA  +FR+   AG   D+ ++
Sbjct: 303 GLVAHAKRLLHELK----RPDNIPRDTAIHILAAAGRJEEATWVFRQAIDAGEVKDITVF 358

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             LI    K     + V + D+M +    P+      +++A+G+
Sbjct: 359 ERLIHLFSKYKKYXNVVEVFDKMRERRYFPDSNVIALVLNAYGK 402



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 184/371 (49%), Gaps = 11/371 (2%)

Query: 171 EWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTV 228
           ++SKAI  F+    R +R      L +  +MI++ G+      A+++       G     
Sbjct: 59  DYSKAISIFS----RLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDT 114

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
            +++ L++ +  +    EA+SVF  M+      +L T N +ID  G+ G+  K   ++F 
Sbjct: 115 VSYTTLLTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMA-KEADKLFW 173

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M + G++P+ +++N+LL V     L+  A +LF  M  + I+Q++ TYN+++    K  
Sbjct: 174 GMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL 233

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           + + A  ++ EM  + I PN +TYST+I  + K G+LD A  +F +++  G+ +D+V Y 
Sbjct: 234 EHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVLYQ 293

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T++  Y + G    A  +  E++    R D +  +  +      G+ +E   +F Q    
Sbjct: 294 TMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAAAGRJEEATWVFRQAIDA 349

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
               ++  +  LI ++SK   Y   +++F + ++     D  + + +++A  K    E A
Sbjct: 350 GEVKDITVFERLIHLFSKYKKYXNVVEVFDKMRERRYFPDSNVIALVLNAYGKLHEFEKA 409

Query: 529 VSLLDEMTKEG 539
            S+  EM  EG
Sbjct: 410 NSVYMEMQDEG 420



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 170/349 (48%), Gaps = 31/349 (8%)

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           R +  D +TY+TL+    K    D A   + +M    +  ++V YS +I+   K      
Sbjct: 3   RALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A+++FS +K  G   D V+YN++++++ K   F EA  +  EM ++G+  D V+Y  LL 
Sbjct: 63  AISIFSRLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLT 122

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
            + +  ++ E   +F +M+      +L T + +IDVY + G+ KEA ++F   ++ G++ 
Sbjct: 123 MHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEP 182

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           +VV Y+ L+       L   A+ L   M ++ I  NVVTYNS++  +G++          
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL--------- 233

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
                 + E AN + +    ++ ++    T + II ++G++       GK +   R  +L
Sbjct: 234 ------EHEKAN-NLIQEMQNRGIEPNSITYSTIISIWGKV-------GKLD---RAAML 276

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
                FQK+    ++ + V +  ++ A  R      A  LL EL+  DN
Sbjct: 277 -----FQKLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 240/518 (46%), Gaps = 45/518 (8%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + ++  L  L   + AK I   A   G   ++  ++  I+   +S    EA+ V  S+
Sbjct: 227 IYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSL 286

Query: 255 KRYNLKPNLVTY-NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
               LK +LVTY   V+  C     +F+  +E+ D+M+  G  P     + L+    + G
Sbjct: 287 GEKGLKADLVTYCTLVLGLCRIQ--EFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMG 344

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             E A  L N++   G+  ++F YN++++++CK  +++ A  + + M  + ++PN VTY+
Sbjct: 345 SIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYT 404

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +IDG+ +  +LD A   F++M   GI     SYN++++   K G+ + A L+ KEM   
Sbjct: 405 ILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDK 464

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G++    TY +L+ GY K G   +  +++ +M    ++PN +T++ LI    +     EA
Sbjct: 465 GLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEA 524

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            ++F E  +  +  + V Y+ LI+  C+ G    A  LLDEM K+G+ P+  TY  +I  
Sbjct: 525 SKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAG 584

Query: 554 F---GRSATTECTVDDVERDLGKQKE---SANLDAMCSQDDKDVQEAGRTD--------- 598
               GR +  +  ++D+     +  E   +A L   C +         R +         
Sbjct: 585 LCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMD 644

Query: 599 ------------NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK------ 640
                       NQ  ++  +L+ E  G+G + +     IL  +  F K   LK      
Sbjct: 645 LVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTIL--IDGFIKSGNLKKAFEFW 702

Query: 641 -------IKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                    PN VT++A++N   +     +A +L + +
Sbjct: 703 YIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRM 740



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 139/534 (26%), Positives = 242/534 (45%), Gaps = 39/534 (7%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  ++  L   G+  +A   F+   +R    ND     + +I   GR  K+D+A   F  
Sbjct: 368 YNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVT--YTILIDGFGRRAKLDVAFYYFNK 425

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
            +  G   TVY+++++I+   + G  + A  +F  M    LKP + TY ++I    K G+
Sbjct: 426 MIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGL 485

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             K   +++ +M   G+ P+ +TF +L+  +C    + EA++ LF+EMV   I  +  TY
Sbjct: 486 VPK-AFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASK-LFDEMVELKILPNEVTY 543

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L++  C+      AFE++ EM  K +SP+  TY  +I G    GR+ +A    +++  
Sbjct: 544 NVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHH 603

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
               LD + Y  +L  + K GR +EAL+  +EM   G++ D V+Y  L+ G   Q     
Sbjct: 604 KHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQND--- 660

Query: 458 VRRMFE---QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
            R +FE   +M    + P+ + Y+ LID + K G  K+A + +      G   + V Y+A
Sbjct: 661 -RILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTA 719

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
           L++ L K G V  A  L   M      PN +TY   +D   +    E  +      L  Q
Sbjct: 720 LVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAML--Q 777

Query: 575 KESAN-------LDAMCSQDDKDVQEAGRTDNQIIKV--------FGQLVAEKAGQGKKE 619
              AN       +   C       QEA +  + +I +        +   + E   +G  +
Sbjct: 778 GSFANTVTYNILIRGYCQIGK--FQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVD 835

Query: 620 NRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
                     + +++ M +  +KP+ V F+ +++AC      + A  L  ++ L
Sbjct: 836 --------AAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMML 881



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 181/377 (48%), Gaps = 4/377 (1%)

Query: 180 AFAVKRE-ERKNDQGKLASAMISILG--RLGKVDLAKNIFETALNEGYGNTVYAFSALIS 236
           A  VKR    K  +  L +    +LG  R+ + ++   + +  +  GY  +  A S LI 
Sbjct: 279 AVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIE 338

Query: 237 AYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQ 296
              + G  + A  + N + +  + PNL  YN++I++  K G   +    +F  M   G+ 
Sbjct: 339 GLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTG-KLEEAELLFSVMAERGLN 397

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           P+ +T+  L+    R    + A   FN+M+  GI   +++YN++++  CK  +M +A  +
Sbjct: 398 PNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELL 457

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
             EM  K + P V TY+++I GY K G +  A  ++ EM   GI  + V++  ++    +
Sbjct: 458 FKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQ 517

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
           + +  EA  +  EM    I  + VTYN L+ G+ ++G       + ++M    +SP+  T
Sbjct: 518 INKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYT 577

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y  LI      G   EA +   +      + D + Y+AL+   CK G ++ A+    EM 
Sbjct: 578 YRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMV 637

Query: 537 KEGIRPNVVTYNSIIDA 553
             G++ ++V+Y  +I  
Sbjct: 638 GRGLQMDLVSYAVLISG 654



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 219/512 (42%), Gaps = 124/512 (24%)

Query: 159 YTFLLRELGNRGE-------WSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDL 211
           YT L+   G R +       ++K I+C   A              ++MI+   + GK+ +
Sbjct: 403 YTILIDGFGRRAKLDVAFYYFNKMIECGISATVYS---------YNSMINCQCKFGKMKM 453

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGR------------------------------S 241
           A+ +F+  +++G   TV  +++LIS Y +                               
Sbjct: 454 AELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALIC 513

Query: 242 GYCQ-----EAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGV 295
           G CQ     EA  +F+ M    + PN VTYN +I+  C +G        E+ D+M++ G+
Sbjct: 514 GLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNT--TRAFELLDEMIKKGL 571

Query: 296 QPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK-------- 346
            PD  T+  L+A +CS G + EA +   N++ H+    D   Y  LL   CK        
Sbjct: 572 SPDTYTYRPLIAGLCSTGRVSEA-KEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEAL 630

Query: 347 ---------GAQMDLA-----------------FEIMAEMPAKNISPNVVTYSTMIDGYA 380
                    G QMDL                  FE++ EM  K + P+ V Y+ +IDG+ 
Sbjct: 631 VARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFI 690

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM---------- 430
           K+G L  A   +  M   G   + V+Y  +++   K G   EA L+ K M          
Sbjct: 691 KSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHI 750

Query: 431 ---------------ESS---------GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
                          E++         G   + VTYN L+ GY + GK+ E  ++ + M 
Sbjct: 751 TYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMI 810

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + P+ +TYST I  Y K G    AM ++    Q GLK D V+++ LI A C NG ++
Sbjct: 811 GIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELD 870

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            A+ L ++M   G++P   TY+S++    + A
Sbjct: 871 RALQLRNDMMLRGLKPTQSTYHSLMVQLAQRA 902



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 193/425 (45%), Gaps = 46/425 (10%)

Query: 289 DMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           +++R+ G+ P+  T ++LL   +R   +     LF+ +V+ G+  D + Y  ++  +C+ 
Sbjct: 179 NLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCEL 238

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
              + A EI+ +      S ++VTY+  I+G  K+ R+ +A+ +   +   G+  D V+Y
Sbjct: 239 KDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTY 298

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
            T++    ++  FE  + +  EM   G        + L+ G  K G  +    +  ++  
Sbjct: 299 CTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGK 358

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             V PNL  Y+++I+   K G  +EA  +F    + GL  + V Y+ LID   +   ++ 
Sbjct: 359 LGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDV 418

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDA---FGRSATTECTVDDVERDLGKQKESANLDAMC 584
           A    ++M + GI   V +YNS+I+    FG+    E    ++  D G +   A   ++ 
Sbjct: 419 AFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEM-VDKGLKPTVATYTSLI 477

Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
           S   K        D  + K F +L  E  G+G                        I PN
Sbjct: 478 SGYCK--------DGLVPKAF-KLYHEMTGKG------------------------IAPN 504

Query: 645 VVTFSAILNACSRCNSFEDASMLLE---ELRLFDNQV-YGVAHGLLMGY-RDNIWVQALS 699
            VTF+A++    + N   +AS L +   EL++  N+V Y V   L+ G+ R+    +A  
Sbjct: 505 TVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNV---LIEGHCREGNTTRAFE 561

Query: 700 LFDEV 704
           L DE+
Sbjct: 562 LLDEM 566



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 143/309 (46%), Gaps = 21/309 (6%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREER--KNDQGKLASAMISILGRLGKVDLAKNIF 216
           YT LL+     G   +A+      V R+E   +  Q  L S  + I G L + D  + +F
Sbjct: 613 YTALLQGFCKEGRIKEAL------VARQEMVGRGLQMDLVSYAVLISGALNQND--RILF 664

Query: 217 ETALNEGYG------NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
           E  L E +G      N +Y  + LI  + +SG  ++A   +  M      PN VTY A++
Sbjct: 665 EL-LREMHGKGMQPDNVIY--TILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALV 721

Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           +   K G        +F  ML     P+ IT+   L   ++ G  E A  L N M+ +G 
Sbjct: 722 NGLFKAGY-VNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAML-QGS 779

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             +  TYN L+   C+  +   A +++  M    + P+ +TYST I  Y K G +D A++
Sbjct: 780 FANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMD 839

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           M+  M   G+  DRV +N ++      G  + AL +  +M   G++    TY++L+    
Sbjct: 840 MWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLA 899

Query: 451 KQGKYDEVR 459
           ++ +  +V+
Sbjct: 900 QRARLTQVQ 908


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 225/494 (45%), Gaps = 37/494 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI+   R  K+  A +        GY      F+ L++     G   EA+ + + M    
Sbjct: 131 MINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQ 190

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             P+L+T N +++  C K  V     V++   M+ NG QP++ T+  +L    + G   +
Sbjct: 191 HVPDLITLNTIVNGLCLKDRV--SEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTAS 248

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A +L  +M HR I   + TY  ++D +CK  ++D A    +EM  K I  NV TY+++I 
Sbjct: 249 ALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIG 308

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            +   GR DD   +  +M    I  + V+++ ++    K G+  EA  +  EM + GI  
Sbjct: 309 SFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEP 368

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + +TYN+L+ G     + DE  +M + M +    P++ TY+ LI+ + K     + M++F
Sbjct: 369 NTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLF 428

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           R+    G+ AD V YS LI   C++  +  A  +  EM  +G+ P ++TY  ++D    +
Sbjct: 429 RKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDN 488

Query: 558 ATTECTVD--------DVERDLG-----------KQKESANLDAMCSQDDKDVQEAGRTD 598
              E  +          +E D+G             K        CS   K V+   ++ 
Sbjct: 489 GELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSY 548

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
           N ++          +G  K+ +    + L     F+KM +   +P+  T++ ++ A  R 
Sbjct: 549 NIML----------SGLCKRSSLSEADAL-----FRKMKEDGYEPDGCTYNTLIRAHLRG 593

Query: 659 NSFEDASMLLEELR 672
           N    +  L+EE++
Sbjct: 594 NDITTSVQLIEEMK 607



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 223/474 (47%), Gaps = 48/474 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +  +L R  + DL   + +    +G    +Y  + +I+ + R      A S    + +  
Sbjct: 96  LFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLG 155

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
            +PN VT+N +++     G  F+  VE+ D M+ +   PD IT N+++  +C +  + EA
Sbjct: 156 YEPNTVTFNTLLNGLCLEGRVFE-AVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEA 214

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
             +L   M+  G   + FTY  +L+ +CK      A +++ +M  + I P+VVTY+ +ID
Sbjct: 215 V-DLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIID 273

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
              K GRLDDAL+ FSEM+  GI  +  +YN+++  +   GR+++   + ++M +  I  
Sbjct: 274 NLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITP 333

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           + VT++AL+    K+GK  E + ++ +M    + PN +TY++LI          EA Q+ 
Sbjct: 334 NVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMM 393

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
                 G   D+  Y+ LI+  CK   V+  + L  +M+  G+  + VTY+++I  F +S
Sbjct: 394 DLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQS 453

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
                      R L   K                           KVF ++V++    G 
Sbjct: 454 -----------RKLIVAK---------------------------KVFQEMVSQGVHPGI 475

Query: 618 KENRCRQEILC-------ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
                  + LC        LG+  +MHK K++ ++  ++ I++     N  +DA
Sbjct: 476 MTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDA 529



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 205/413 (49%), Gaps = 9/413 (2%)

Query: 144 DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMI 200
           D++ +     C  + +T+  +L  +   G  + A+       K E RK     +  + +I
Sbjct: 216 DLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLR---KMEHRKIKPHVVTYTIII 272

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
             L + G++D A + F     +G    V+ +++LI ++   G   +   +   M    + 
Sbjct: 273 DNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKIT 332

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAAR 319
           PN+VT++A+ID+  K G       +++++M+  G++P+ IT+NSL+  +C+   L EA +
Sbjct: 333 PNVVTFSALIDSLVKEG-KLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQ 391

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            + + MV +G D DI+TYN L++  CK  Q+D    +  +M  + +  + VTYST+I G+
Sbjct: 392 -MMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGF 450

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            ++ +L  A  +F EM   G+    ++Y  +L      G  EEAL +  +M    +  D 
Sbjct: 451 CQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDI 510

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
             YN ++ G     K D+   +F  + +  V  ++ +Y+ ++    K     EA  +FR+
Sbjct: 511 GIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRK 570

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            K+ G + D   Y+ LI A  +   + ++V L++EM + G   +  T   ++D
Sbjct: 571 MKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMD 623



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 186/394 (47%), Gaps = 11/394 (2%)

Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AM 199
           D+L+K E +        YT ++  L   G    A+  F+      E K  +  + +  ++
Sbjct: 251 DLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFS----EMETKGIKANVFTYNSL 306

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I      G+ D    +    +       V  FSALI +  + G   EA  ++N M    +
Sbjct: 307 IGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGI 366

Query: 260 KPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           +PN +TYN++I   C    +D     ++ D M+  G  PD  T+N L+    +    +  
Sbjct: 367 EPNTITYNSLIYGLCNDKRLD--EANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDG 424

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             LF +M  RG+  D  TY+TL+   C+  ++ +A ++  EM ++ + P ++TY+ ++DG
Sbjct: 425 MRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDG 484

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
               G L++AL +  +M    + LD   YN ++       + ++A  +   + S G+++D
Sbjct: 485 LCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRD 544

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
             +YN +L G  K+    E   +F +MK D   P+  TY+TLI  + +G     ++Q+  
Sbjct: 545 IQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIE 604

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
           E K+ G  +D      ++D L    L +S +++L
Sbjct: 605 EMKRCGFSSDASTVKIVMDMLSSGELDKSFLNML 638



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 143/281 (50%), Gaps = 2/281 (0%)

Query: 276 GGVDFKH--VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G VD K    V +F  MLR+   P  I FN L  + +R   ++    L  +M  +GI  D
Sbjct: 65  GLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYD 124

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++T N +++  C+  ++  AF  M ++      PN VT++T+++G    GR+ +A+ +  
Sbjct: 125 LYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVD 184

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
            M       D ++ NT+++      R  EA+ +   M ++G + +  TY  +L    K G
Sbjct: 185 CMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSG 244

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
                  +  +M+   + P+++TY+ +ID   K G   +A+  F E +  G+KA+V  Y+
Sbjct: 245 NTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYN 304

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +LI + C  G  +    LL +M    I PNVVT++++ID+ 
Sbjct: 305 SLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSL 345



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/341 (21%), Positives = 143/341 (41%), Gaps = 31/341 (9%)

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
           D+ + +Y   L +     + D A  +   M      P V+ ++ +    A+  + D  L 
Sbjct: 52  DRKMSSYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLA 111

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +  +M+  GI  D  + N +++ + +  +   A     ++   G   + VT+N LL G  
Sbjct: 112 LCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLC 171

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
            +G+  E   + + M      P+L+T +T+++         EA+ +       G + +  
Sbjct: 172 LEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQF 231

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y  +++ +CK+G   SA+ LL +M    I+P+VVTY  IID   +       +DD    
Sbjct: 232 TYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDG----RLDDA--- 284

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
                    L      + K ++    T N +I  F          G+ ++  +       
Sbjct: 285 ---------LSFFSEMETKGIKANVFTYNSLIGSFCSF-------GRWDDGAQ------- 321

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            + + M   KI PNVVTFSA++++  +     +A  L  E+
Sbjct: 322 -LLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEM 361



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 96/189 (50%), Gaps = 7/189 (3%)

Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
           K+ +AK +F+  +++G    +  ++ L+     +G  +EA+ + + M +  ++ ++  YN
Sbjct: 455 KLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYN 514

Query: 268 AVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEM 325
            +I   C    VD      +F  +   GV+ D  ++N +L+ +C R  L EA   LF +M
Sbjct: 515 IIIHGMCNANKVD--DAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADA-LFRKM 571

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              G + D  TYNTL+ A  +G  +  + +++ EM     S +  T   ++D  + +G L
Sbjct: 572 KEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLS-SGEL 630

Query: 386 DDA-LNMFS 393
           D + LNM S
Sbjct: 631 DKSFLNMLS 639


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 185/358 (51%), Gaps = 6/358 (1%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
            +VD A  +       G    V  +S+L+  Y +SG  ++   VF  M    ++P++V Y
Sbjct: 164 AEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMY 223

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEM 325
             +ID+  K G   K    + D M+R G++P+ +T+N L+  +C  G + EA   +  +M
Sbjct: 224 TGLIDSLCKVG-KAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAI-GVLKKM 281

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP-AKNI-SPNVVTYSTMIDGYAKAG 383
             +G+  D+ TYNTL+  +    +MD A  ++ EM   KNI  PNVVT++++I G    G
Sbjct: 282 SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIG 341

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           R+  A  + + M+  G  ++ V+YN ++    ++ +  +A+ +  EM S G+  D+ TY+
Sbjct: 342 RMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYS 401

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            L+ G+ K  + D    +   M+   + P L  Y  L+    + G+ + A  +F E    
Sbjct: 402 ILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN- 460

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
               DVV YS +I   CK G +++A  LL  +  EG+ P+ VTY+ +I+ F +S   E
Sbjct: 461 NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDME 518



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 216/464 (46%), Gaps = 37/464 (7%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMK---RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
           +++ +++A  R G+   A ++  +M        +PN V+Y  ++ A C     D    V 
Sbjct: 79  SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLAD--QAVG 136

Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +   M   GV+ D +T+ +L+         + A  L  EM   GI+ ++  Y++LL   C
Sbjct: 137 LLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYC 196

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  + +   ++  EM  K I P+VV Y+ +ID   K G+   A  +   M   G+  + V
Sbjct: 197 KSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVV 256

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +YN +++   K G  +EA+ V K+M   G+  D VTYN L+ G     + DE   + E+M
Sbjct: 257 TYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM 316

Query: 466 --KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
               + V PN++T++++I      G  ++A Q+    ++ G   ++V Y+ LI  L +  
Sbjct: 317 VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVH 376

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESAN-- 579
            V  A+ L+DEMT  G+ P+  TY+ +I  F +    +   D     RD G + E  +  
Sbjct: 377 KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436

Query: 580 --LDAMCSQDDKDVQEAGRT-----DNQI---IKVFGQLV--AEKAGQGKKENRCRQEIL 627
             L AMC Q    + E  R      DN     +  +  ++  A KAG  K      + I+
Sbjct: 437 PLLVAMCEQG---MMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIV 493

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                        + P+ VT+S ++N  ++    E A+ +L+++
Sbjct: 494 ----------DEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 127/226 (56%), Gaps = 3/226 (1%)

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEM---PAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           +D  +YNT+L A+C+    D A  ++  M   P     PN V+Y+ ++         D A
Sbjct: 75  RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           + +   M+  G+  D V+Y T++         ++A+ +  EM  SGI  + V Y++LL G
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           Y K G++++V ++F +M    + P+++ Y+ LID   K G  K+A  +     + GL+ +
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           VV Y+ LI+ +CK G V+ A+ +L +M+++G+ P+VVTYN++I   
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 183/402 (45%), Gaps = 49/402 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           Y+ LL+     G W    + F   V+  E+  +   +  + +I  L ++GK   A  + +
Sbjct: 188 YSSLLQGYCKSGRWEDVGKVF---VEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMD 244

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
             +  G    V  ++ LI+   + G  +EAI V   M    + P++VTYN +I    KG 
Sbjct: 245 MMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI----KGL 300

Query: 278 VDFKHVVE---IFDDMLR--NGVQPDRITFNSLL-AVCSRGGLWEA-------------- 317
            D   + E   + ++M+R  N V+P+ +TFNS++  +C  G + +A              
Sbjct: 301 SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMV 360

Query: 318 --------------------ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
                               A  L +EM   G++ D FTY+ L+   CK  Q+D A +++
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLL 420

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
           + M  + I P +  Y  ++    + G ++ A N+F+EM      LD V+Y+T++    K 
Sbjct: 421 STMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKA 479

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G  + A  + K +   G+  DAVTY+ ++  + K G  +    + +QM A    P++  +
Sbjct: 480 GDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVF 539

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +LI  YS  G   + +++ RE     +  D  + S L  +L
Sbjct: 540 DSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSL 581


>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Brachypodium distachyon]
          Length = 904

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 181/363 (49%), Gaps = 3/363 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I++  ++GKV  A  I +   + G  +    +S LIS +        A S+F  M +  
Sbjct: 450 LINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSG 509

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           L+P+   YN +I+A C  G +D    + I + M +  +QP    F  ++   +  G  + 
Sbjct: 510 LQPDRAIYNLLIEAFCKMGNMD--RAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKR 567

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A N+ + M   G    + TYN L+  + K  Q++ A  ++ +M    I+PN  TY+ ++ 
Sbjct: 568 ALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMR 627

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GYA  G +  A   F+++K  G+ LD   Y T+L    K GR + AL V +EM +  I +
Sbjct: 628 GYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIAR 687

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +   YN L+ G+ ++G   E   + +QMK D V PN+ TY++ I+   K G  + A ++ 
Sbjct: 688 NTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVI 747

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E    GLK ++  Y+ LI    K  L + A+   +EM   G++P+   Y+ ++ +    
Sbjct: 748 EEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSLLSR 807

Query: 558 ATT 560
           AT 
Sbjct: 808 ATV 810



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 141/584 (24%), Positives = 255/584 (43%), Gaps = 64/584 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI    + G    A+  FE     G     + F++L+ AY  +   +  +S    MK   
Sbjct: 275 MIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEG 334

Query: 259 LKPNLVTYNAVIDACGK----GGVD--FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           ++  +VTY+ +I    K       D  FK       D+  NG+    I  N + A C  G
Sbjct: 335 IELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDL--NGI----IYSNIIHAHCQSG 388

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDA---ICKGAQMDLAFEIMAEMPAKNISPNV 369
            + + A  L  EM   GID  I  Y++++     I    +  + FE + E      +P++
Sbjct: 389 NM-DRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKEC---CFTPSI 444

Query: 370 VTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
           ++Y  +I+ Y K G++  A+ +  EM+  GI  +  +Y+ ++S +  L  F  A  + +E
Sbjct: 445 ISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEE 504

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M  SG++ D   YN L+  + K G  D   R+ E+M+ + + P+   +  +I+ ++  G 
Sbjct: 505 MLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGD 564

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
            K A+ I    +++G    V+ Y+ALI  L K   VE AVS+L++M+  GI PN  TY  
Sbjct: 565 MKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTI 624

Query: 550 IIDAFGRSATTECTVDDVERDLGKQKE--------SANLDAMCSQD-DKDVQEAGRTDNQ 600
           I+  +  +            D+GK  E           LD    +   +   ++GR  + 
Sbjct: 625 IMRGYAANG-----------DIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSA 673

Query: 601 IIKVFGQLVAEKAGQGKKENRC-------RQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
            + V  ++  +K  +              R ++     + ++M +  + PN+ T+++ +N
Sbjct: 674 -LAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYIN 732

Query: 654 ACSRCNSFEDASMLLEE---------LRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEV 704
           AC +    + A  ++EE         L+ +   + G A   L         +AL  F+E+
Sbjct: 733 ACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPD-------RALKSFEEM 785

Query: 705 KLMDSSTASAFYNAL-TDMLWHFGQKRGAQLVVLEGKRRQVWEN 747
           KL       A Y+ L T +L       G+    +    R+++EN
Sbjct: 786 KLAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSICREMFEN 829



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 121/533 (22%), Positives = 231/533 (43%), Gaps = 81/533 (15%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
           G + S +I    + G +D A+ +      +G    + A+ +++  Y      ++ + VF 
Sbjct: 374 GIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFE 433

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
            +K     P++++Y  +I+   K G   K  + I  +M   G++ +  T++ L++     
Sbjct: 434 RLKECCFTPSIISYGCLINLYIKIGKVTK-AIAISKEMESYGIKHNNKTYSMLISGFIHL 492

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
             +  A ++F EM+  G+  D   YN L++A CK   MD A  I+ +M  + + P+   +
Sbjct: 493 HDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAF 552

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
             +I+G+A AG +  ALN+                                      M  
Sbjct: 553 RPIIEGFAVAGDMKRALNILDL-----------------------------------MRR 577

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           SG     +TYNAL+ G  K+ + +    +  +M    ++PN  TY+ ++  Y+  G   +
Sbjct: 578 SGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGK 637

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A + F + K+ GLK DV +Y  L+ A CK+G ++SA+++  EM+ + I  N   YN +ID
Sbjct: 638 AFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILID 697

Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE- 611
            + R               G   E+A+L        K ++E G   N  I  +   +   
Sbjct: 698 GWARR--------------GDVWEAADL-------MKQMKEDGVPPN--IHTYTSYINAC 734

Query: 612 -KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
            KAG  ++  +          V ++M  + +KPN+ T++ ++   ++ +  + A    EE
Sbjct: 735 CKAGDMQRAQK----------VIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEE 784

Query: 671 LRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
           ++L   +    A+  L+           SL     +M+ ST +   +   +M 
Sbjct: 785 MKLAGLKPDEAAYHCLV----------TSLLSRATVMEGSTYTGILSICREMF 827



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 211/476 (44%), Gaps = 43/476 (9%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           D++ VV  F+ +     +P R  F  ++   ++ G    AR  F  M  RGI+ + F + 
Sbjct: 253 DWQAVVSAFERI----PKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFT 308

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L+ A      M      + EM A+ I   +VTYS +I G+AK      A N+F E K  
Sbjct: 309 SLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAK 368

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
              L+ + Y+ ++  + + G  + A  + +EME  GI      Y++++ GY       + 
Sbjct: 369 LGDLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKC 428

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +FE++K  C +P++++Y  LI++Y K G   +A+ I +E +  G+K +   YS LI  
Sbjct: 429 LIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISG 488

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
                   +A S+ +EM K G++P+   YN +I+AF +    +  +  +E+    QKE  
Sbjct: 489 FIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEK---MQKER- 544

Query: 579 NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
                       +Q + R    II+ F       AG  K+           L +   M +
Sbjct: 545 ------------MQPSNRAFRPIIEGFAV-----AGDMKR----------ALNILDLMRR 577

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNQVYGVAHGLLMGYRDNIW 694
               P V+T++A+++   + N  E A  +L ++ +     +   Y +   ++ GY  N  
Sbjct: 578 SGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTI---IMRGYAANGD 634

Query: 695 V-QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVW 749
           + +A   F ++K          Y  L       G+ + A  V  E   +++  N +
Sbjct: 635 IGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTF 690


>gi|147841962|emb|CAN63129.1| hypothetical protein VITISV_001456 [Vitis vinifera]
          Length = 701

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 152/570 (26%), Positives = 267/570 (46%), Gaps = 60/570 (10%)

Query: 290 MLRNGVQPDR--ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
             R  ++P R  I +N  L V  +    + A  LF+EM+ RG+  D  T++T++      
Sbjct: 165 FFRKRLKPSREVILYNVTLKVFRKCRNLDXAEKLFDEMLERGVKPDNITFSTIISCARVS 224

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
           +  + A E   +MP     P+ VTYS MID Y +AG +D AL ++   +     +D V++
Sbjct: 225 SLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTF 284

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           +T++ IY   G F+  L V +EM++ G++ + V YN LL   G+  +  + + ++++M  
Sbjct: 285 STLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTN 344

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN-GLVE 526
           + +  +  TY+ L+  Y +    ++A+ +++E K+ GL+  VVLY+ L+ A+C + G  E
Sbjct: 345 NGLQLSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLL-AMCADVGYTE 403

Query: 527 SAVSLLDEMTKEG-IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES-ANLDAMC 584
            A ++ ++M   G   P+  T++S+I  +  S              GK  E+ A L+AM 
Sbjct: 404 EAAAIFEDMKSSGNCMPDSWTFSSLITIYSCS--------------GKVSEAEAMLNAML 449

Query: 585 SQDDKDVQEAGRTDN-----QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
                   EAG   N      +I+ +G           K NR  +    ++  F ++ +L
Sbjct: 450 --------EAGFEPNIFVLTSLIQCYG-----------KANRTDE----VVRTFDRLLEL 486

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL--MGYRDNIWVQA 697
            I P+      +LN  ++ +  E+   L++ +   + ++  V   LL           +A
Sbjct: 487 DITPDDRFCGCMLNVMTQ-SPKEELGKLIDCIDKANPKLGNVVKLLLEEQNGEGTFRKEA 545

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES----C 753
             LFD +    +    A+ N L D+  +      A  +   G   +++ ++ S+S     
Sbjct: 546 SELFDSIS---ADVXKAYCNCLIDLCVNLNLLEKACELFDLGLTLEIYIDIQSKSPTQWS 602

Query: 754 LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVEV 813
           L L  +S GAA   +H W+ ++   V  G ELP +L I TG GKH     D  L    E 
Sbjct: 603 LHLKSLSLGAALTALHIWMNDLSKAVEVGEELPAVLGINTGHGKHK--YSDKGLASVFES 660

Query: 814 LLTGMGAPFWVANCNLGRFISTGPMVASWL 843
            L  + APF  A   +  F++T     SWL
Sbjct: 661 HLKELNAPFHEAPDKVXWFLTTKVAATSWL 690



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 174/342 (50%), Gaps = 16/342 (4%)

Query: 245 QEAISVFNSMK------------RYNLKPN--LVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           Q+A+ V N+M             R  LKP+  ++ YN  +    K   +     ++FD+M
Sbjct: 144 QDAVIVLNNMTNPETALLAFGFFRKRLKPSREVILYNVTLKVFRKCR-NLDXAEKLFDEM 202

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           L  GV+PD ITF+++++      L   A   F +M   G   D  TY+ ++DA  +   +
Sbjct: 203 LERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNV 262

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           D+A ++      +    + VT+ST+I  Y  +G  D  LN++ EMK LG+  + V YNT+
Sbjct: 263 DMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTL 322

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           L    +  R  +A  + KEM ++G++    TY ALL  YG+    ++   ++++MK   +
Sbjct: 323 LDAMGRAKRPWQAKNIYKEMTNNGLQLSWGTYAALLRAYGRARYAEDALIVYKEMKEKGL 382

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG-LKADVVLYSALIDALCKNGLVESAV 529
             +++ Y+TL+ + +  G  +EA  IF + K +G    D   +S+LI     +G V  A 
Sbjct: 383 ELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAE 442

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
           ++L+ M + G  PN+    S+I  +G++  T+  V   +R L
Sbjct: 443 AMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLL 484



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 224/501 (44%), Gaps = 32/501 (6%)

Query: 17  QNHQYPHNHL---KNNHHRQSHHPSSRPHWTSHKVSLTKPPLSPSPRNAPKPAATSTTVA 73
            +H Y HN L   + +  R  +  S +P+  S   S T   ++      P P  T    A
Sbjct: 14  HDHHYLHNSLSFSRKSRLRSFNSFSFKPNSLSLH-SRTFLQITHVSLEDPIPQETQKADA 72

Query: 74  PNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGR----PKIAMSTRHSVVAEEAL 129
            NP   +S  P   +KS +  +    R+++     +  R     KIA S       EE +
Sbjct: 73  SNPP--NSQDPDRKTKSYIWVNPRSPRASKLRQHSYDARYASLVKIAESLDSCEATEEDV 130

Query: 130 HHVTAFARDDVSLGD-ILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREER 188
             V         LGD IL++         D   +L  + N      A+  F F  KR  +
Sbjct: 131 SQVLR------CLGDKILEQ---------DAVIVLNNMTNP---ETALLAFGFFRKRL-K 171

Query: 189 KNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAI 248
            + +  L +  + +  +   +D A+ +F+  L  G       FS +IS    S    +A+
Sbjct: 172 PSREVILYNVTLKVFRKCRNLDXAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAV 231

Query: 249 SVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
             F  M  +   P+ VTY+A+IDA G+ G +    ++++D       + D +TF++L+ +
Sbjct: 232 EWFEKMPEFGCHPDDVTYSAMIDAYGRAG-NVDMALKLYDRARTEKWRIDPVTFSTLIRI 290

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
               G ++   N++ EM   G+  ++  YNTLLDA+ +  +   A  I  EM    +  +
Sbjct: 291 YGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQLS 350

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
             TY+ ++  Y +A   +DAL ++ EMK  G+ L  V YNT+L++ A +G  EEA  + +
Sbjct: 351 WGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFE 410

Query: 429 EMESSG-IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           +M+SSG    D+ T+++L+  Y   GK  E   M   M      PN+   ++LI  Y K 
Sbjct: 411 DMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKA 470

Query: 488 GLYKEAMQIFREFKQAGLKAD 508
               E ++ F    +  +  D
Sbjct: 471 NRTDEVVRTFDRLLELDITPD 491



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 161/373 (43%), Gaps = 76/373 (20%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SAMI   GR G VD+A  +++ A  E +      FS LI  YG SG     ++V+  MK 
Sbjct: 250 SAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKA 309

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             +KPNLV YN ++DA G+    ++    I+ +M  NG+Q    T+ +LL    R    E
Sbjct: 310 LGVKPNLVIYNTLLDAMGRAKRPWQ-AKNIYKEMTNNGLQLSWGTYAALLRAYGRARYAE 368

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  ++ EM  +G++  +  YNTLL A+C                               
Sbjct: 369 DALIVYKEMKEKGLELSVVLYNTLL-AMC------------------------------- 396

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGL-DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
              A  G  ++A  +F +MK  G  + D  +++++++IY+  G+  EA  +   M  +G 
Sbjct: 397 ---ADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGF 453

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSP---------NLLTYS------TL 480
             +     +L+  YGK  + DEV R F+++    ++P         N++T S       L
Sbjct: 454 EPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDITPDDRFCGCMLNVMTQSPKEELGKL 513

Query: 481 IDVYSK-------------------GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           ID   K                   G   KEA ++F        KA     + LID LC 
Sbjct: 514 IDCIDKANPKLGNVVKLLLEEQNGEGTFRKEASELFDSISADVXKA---YCNCLID-LCV 569

Query: 522 N-GLVESAVSLLD 533
           N  L+E A  L D
Sbjct: 570 NLNLLEKACELFD 582


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 184/353 (52%), Gaps = 8/353 (2%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD A  +       G    V  +S L+  Y ++G  +    VF  M    ++P++V Y  
Sbjct: 164 VDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTG 223

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
           +ID+ C +G V  K   ++ D M+  G++P+ +T+N L+ ++C  G + EA  +L N M+
Sbjct: 224 LIDSLCREGKV--KKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAM-SLRNNML 280

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM--PAKNISPNVVTYSTMIDGYAKAGR 384
            +G+  D  TYNTL+  +    +MD A  ++ EM      + PNVVT++++I G  K GR
Sbjct: 281 EKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGR 340

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
           +  A  +   M   G   + V++N ++    ++ + ++A+ +  EM SSG+  D+ TY+ 
Sbjct: 341 MRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSI 400

Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           L+ G+ K  + D    +  +M+ D + P L+ Y  L+    + G+ ++A   F E  +  
Sbjct: 401 LINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK-N 459

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            K DVV YS +I   C+    +SA   L  M  EG+ P+ VTY+ +I+ F  S
Sbjct: 460 CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANS 512



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 186/368 (50%), Gaps = 36/368 (9%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK------------- 275
           +++ +++A  R G C +A      +  +  +P  V+Y  ++ A C +             
Sbjct: 80  SYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDM 139

Query: 276 --GGV------------------DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              GV                  D    VE+  +M  +G++P+ + ++ LL    + G W
Sbjct: 140 QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRW 199

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E    +F EM  RGI+ D+  Y  L+D++C+  ++  A ++M +M  + + PNVVTY+ +
Sbjct: 200 ECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVL 259

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM--ESS 433
           I+   K G + +A+++ + M   G+ LD V+YNT+++  + +   +EA+ + +EM    +
Sbjct: 260 INSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGET 319

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            +  + VT+N+++ G  K G+  +  ++ + M  +  + NL+T++ LI    +    K+A
Sbjct: 320 MVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKA 379

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           M++  E   +GL+ D   YS LI+  CK   V+ A SLL +M ++GI P +V Y  ++ A
Sbjct: 380 MELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAA 439

Query: 554 FGRSATTE 561
                  E
Sbjct: 440 LCEQGMME 447



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 149/297 (50%), Gaps = 7/297 (2%)

Query: 264 VTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
           V+YN V+ A C +GG            ++ +  +P  +++ +L+ A+C+     +A   L
Sbjct: 79  VSYNTVLAALCRQGGC--LDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAV-GL 135

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             +M   G+  D+ TY TL+  +C  A +D A E++ EM    I PNVV YS ++ GY K
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           AGR +    +F EM   GI  D V Y  ++    + G+ ++A  V  +M   G+  + VT
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF- 500
           YN L+    K+G   E   +   M    V+ + +TY+TLI   S      EAM +  E  
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315

Query: 501 -KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             +  ++ +VV ++++I  LCK G +  A  + D M + G   N+VT+N +I    R
Sbjct: 316 HGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLR 372



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 130/224 (58%), Gaps = 2/224 (0%)

Query: 332 QDIFTYNTLLDAICK-GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
           +D  +YNT+L A+C+ G  +D A  ++  M A    P  V+Y+T++       R   A+ 
Sbjct: 76  RDAVSYNTVLAALCRQGGCLDAALFLLRVM-AHETRPTAVSYTTLMRALCAERRTGQAVG 134

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +  +M+  G+  D V+Y T++         ++A+ + +EM  SGI  + V Y+ LL GY 
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC 194

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K G+++ V ++FE+M    + P+++ Y+ LID   + G  K+A Q+  +  + GL+ +VV
Sbjct: 195 KAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV 254

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            Y+ LI+++CK G V+ A+SL + M ++G+  + VTYN++I   
Sbjct: 255 TYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGL 298



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 176/406 (43%), Gaps = 51/406 (12%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQG-----KLASAMISILGRLGKVDLAK 213
           Y+ LL+     G W    + F       E  + +G      + + +I  L R GKV  A 
Sbjct: 186 YSCLLQGYCKAGRWECVSKVF-------EEMSGRGIEPDVVMYTGLIDSLCREGKVKKAT 238

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR---------YN------ 258
            + +  +  G    V  ++ LI++  + G  +EA+S+ N+M           YN      
Sbjct: 239 QVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGL 298

Query: 259 ----------------------LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQ 296
                                 ++PN+VT+N+VI    K G   +   ++ D M  NG  
Sbjct: 299 SGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTG-RMRQAFQVRDMMAENGCA 357

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
            + +TFN L+    R    + A  L +EM   G++ D FTY+ L++  CK  Q+D A  +
Sbjct: 358 CNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESL 417

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           +++M    I P +V Y  ++    + G ++ A N F EM      LD V+Y+T++    +
Sbjct: 418 LSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK-NCKLDVVAYSTMIHGACR 476

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
           L   + A    K M   G+  D+VTY+ L+  +   G      R+ +QM A    P++  
Sbjct: 477 LRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAV 536

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
           + +LI  Y   G  ++ +++ RE     +  D  + S +   L  N
Sbjct: 537 FDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVAN 582


>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g04760, chloroplastic-like [Glycine max]
          Length = 531

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 182/348 (52%), Gaps = 7/348 (2%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A  + +   N+G+   +  ++ LI +    G    A+   N + + N  P +VTY  +I+
Sbjct: 108 AYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIE 167

Query: 272 ACG-KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           A   +GG+D    +++ D+M    +QPD   +NS++ +C R G  + A  + + +  +G 
Sbjct: 168 ATLLQGGID--EAIKLLDEMFEINLQPDVFPYNSIIXMC-REGYVDRAFEVISSISSKGY 224

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             D+ TYN LL ++    + +  FE+M++M AK    NVVTYS +I    + G++++ + 
Sbjct: 225 ALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVG 284

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +  +MK  G+  D   Y+ ++++  K GR + A+ V   M S G   D V YN +L    
Sbjct: 285 LLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLC 344

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           KQ + DE   +FE++     SPN  +Y+T+       G    A+ +  E     +  DV+
Sbjct: 345 KQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDX-VDPDVI 403

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEG--IRPNVVTYNSIIDAFGR 556
            Y++LI  LC++G+V+ A+ LL +M  E    +P+VV+YN ++    R
Sbjct: 404 AYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCR 451



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 170/338 (50%), Gaps = 5/338 (1%)

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
           L E +  TV  ++ LI A    G   EAI + + M   NL+P++  YN++I  C +G VD
Sbjct: 151 LKENFNPTVVTYTILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIXMCREGYVD 210

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
                E+   +   G   D IT+N LL      G WEA   L ++MV +G + ++ TY+ 
Sbjct: 211 --RAFEVISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSV 268

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+ ++C+  +++    ++ +M  K + P+   Y  +I    K GR+D A+ +   M   G
Sbjct: 269 LISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDG 328

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
              D V+YNT+L+   K  R +EAL + +++   G   +A +YN +    G  G      
Sbjct: 329 CVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRAL 388

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF--REFKQAGLKADVVLYSALID 517
            M  +M  D V P+++ Y++LI    + G+  EA+++    E + +  K  VV Y+ ++ 
Sbjct: 389 GMILEM-LDXVDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLL 447

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
            LC+ G V  A  +L  M  +G  PN  TY  +I+  G
Sbjct: 448 GLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGIG 485



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 139/280 (49%), Gaps = 3/280 (1%)

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             H  ++ D M   G  PD +T+N L+ ++CSRG +  AA    N+++    +  + TY 
Sbjct: 105 IPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRG-MLHAALEFKNQLLKENFNPTVVTYT 163

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L++A      +D A +++ EM   N+ P+V  Y+++I    + G +D A  + S +   
Sbjct: 164 ILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSK 222

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G  LD ++YN +L      G++E    +  +M + G   + VTY+ L+    + GK +E 
Sbjct: 223 GYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEG 282

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + + MK   + P+   Y  LI V  K G    A+++       G   D+V Y+ ++  
Sbjct: 283 VGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILAC 342

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           LCK    + A+S+ +++ + G  PN  +YN++  A G S 
Sbjct: 343 LCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSG 382



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 143/297 (48%), Gaps = 6/297 (2%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I  + R G VD A  +  +  ++GY   V  ++ L+ +    G  +    + + M     
Sbjct: 200 IIXMCREGYVDRAFEVISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGC 259

Query: 260 KPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           + N+VTY+ +I + C  G V+    V +  DM + G++PD   ++ L+AV  + G  + A
Sbjct: 260 EANVVTYSVLISSLCRDGKVE--EGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLA 317

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             + + M+  G   DI  YNT+L  +CK  + D A  I  ++     SPN  +Y+T+   
Sbjct: 318 IEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSA 377

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA--LLVCKEMESSGIR 436
              +G    AL M  EM    +  D ++YN+++S   + G  +EA  LLV  EMESS  +
Sbjct: 378 LGSSGHKVRALGMILEM-LDXVDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECK 436

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
              V+YN +L G  + G+  +   +   M      PN  TY+ LI+    GG   +A
Sbjct: 437 PSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGIGFGGWLNDA 493



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/422 (22%), Positives = 175/422 (41%), Gaps = 70/422 (16%)

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  + + M ++G   DI TYN L+ ++C    +  A E   ++  +N +P VVTY+ +I+
Sbjct: 108 AYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIE 167

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
                G +D+A+ +  EM  + +  D   YN+++ +  + G  + A  V   + S G   
Sbjct: 168 ATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIXM-CREGYVDRAFEVISSISSKGYAL 226

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D +TYN LL     QGK+                                   +   ++ 
Sbjct: 227 DVITYNILLRSLXNQGKW-----------------------------------EAGFELM 251

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            +    G +A+VV YS LI +LC++G VE  V LL +M K+G+ P+   Y+ +I    + 
Sbjct: 252 SDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKE 311

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
              +  ++              LD M S  D  V +    +  +  +  Q  A++A    
Sbjct: 312 GRVDLAIE-------------VLDVMIS--DGCVPDIVNYNTILACLCKQKRADEA---- 352

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC-SRCNSFEDASMLLEELRLFDN 676
                       L +F+K+ ++   PN  +++ + +A  S  +      M+LE L   D 
Sbjct: 353 ------------LSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDXVDP 400

Query: 677 QVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAF--YNALTDMLWHFGQKRGAQL 734
            V      +    RD +  +A+ L  ++++  S    +   YN +   L   G+   A  
Sbjct: 401 DVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATE 460

Query: 735 VV 736
           V+
Sbjct: 461 VL 462



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 148/338 (43%), Gaps = 46/338 (13%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LLR L N+G+W    +                 L S M++                 
Sbjct: 231 YNILLRSLXNQGKWEAGFE-----------------LMSDMVA----------------- 256

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
              +G    V  +S LIS+  R G  +E + +   MK+  L+P+   Y+ +I   C +G 
Sbjct: 257 ---KGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGR 313

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           VD    +E+ D M+ +G  PD + +N++LA   +    + A ++F ++   G   +  +Y
Sbjct: 314 VDL--AIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSY 371

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           NT+  A+        A  ++ EM    + P+V+ Y+++I    + G +D+A+ +  +M+ 
Sbjct: 372 NTVFSALGSSGHKVRALGMILEM-LDXVDPDVIAYNSLISCLCRDGMVDEAIELLVDMEM 430

Query: 398 LG--IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
                    VSYN VL    ++GR  +A  V   M   G   +  TY  L+ G G  G  
Sbjct: 431 ESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGIGFGGWL 490

Query: 456 DEVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKE 492
           ++ R +   +   D +S +  ++  L   + K  +Y++
Sbjct: 491 NDARDLATTLVNMDAISEH--SFERLYKTFCKLDVYRQ 526


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 140/567 (24%), Positives = 262/567 (46%), Gaps = 38/567 (6%)

Query: 179 FAFAVKREERKNDQGK-----LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSA 233
            A A +  ER   +G+     L + +I  L R G+   A  +  TA   G    V+A++ 
Sbjct: 51  LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLR 292
           L++ Y R G    A  +  SM    + P+  TY  +I   C +G V     + + DDMLR
Sbjct: 111 LVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRV--GDALSLLDDMLR 165

Query: 293 NGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
              QP  +T+  LL AVC   G  +A + + +EM  +G   +I TYN +++ +C+  ++D
Sbjct: 166 RECQPSVVTYTVLLEAVCKSSGFGQAMK-VLDEMRAKGCTPNIVTYNVIINGMCREDRVD 224

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
            A +I+  + +    P+ V+Y+T++ G   A R +D   +F EM       + V+++ ++
Sbjct: 225 DARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLV 284

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
             + + G  E A+ V   M   G   +    N ++    KQG+ D+       M +   S
Sbjct: 285 RFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCS 344

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P+ ++Y+T++    + G +++A ++  E  +     + V ++  I  LC+ GL++ A+ L
Sbjct: 345 PDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILL 404

Query: 532 LDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           +++M + G    +VTYN++++ F   GR  +     + +  +      +  L  +C  + 
Sbjct: 405 IEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLCHAER 464

Query: 589 KD-----VQEAGRTDNQI-IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
            D     + E  + D  + +  F  LV+    +G  E          + + Q+M +    
Sbjct: 465 LDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEE--------AIELVQQMMEHGCT 516

Query: 643 PNVVTFSAILNACSR-CNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWVQA 697
           PN++TF+ +L+  +  CNS E+A  LL  L       D   Y     +L   R++   +A
Sbjct: 517 PNLITFNTLLDGITEDCNS-EEALELLHGLVSKGISLDTITYSSIVDVL--SREDRIEEA 573

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLW 724
           + +F  V+ M     +  YN +   L 
Sbjct: 574 VQMFHAVQDMGMRPKAVMYNKILSALC 600



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 189/398 (47%), Gaps = 6/398 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT +L+ L     W      F   V+     N+       ++    R G V+ A  + + 
Sbjct: 245 YTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVT--FDMLVRFFCRGGMVERAIEVLDR 302

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G        + +I++  + G   +A    N+M  Y   P+ ++Y  V+    + G 
Sbjct: 303 MSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAG- 361

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            ++   E+ ++M+R    P+ +TFN+ + +  + GL + A  L  +M   G    I TYN
Sbjct: 362 RWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYN 421

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L++  C   ++D A E+   +P +   PN +TY+T++ G   A RLD A  + +EM   
Sbjct: 422 ALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMMQN 478

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
              L+ V++N ++S + + G  EEA+ + ++M   G   + +T+N LL G  +    +E 
Sbjct: 479 DCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEA 538

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +   + +  +S + +TYS+++DV S+    +EA+Q+F   +  G++   V+Y+ ++ A
Sbjct: 539 LELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSA 598

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           LCK    + A+     M      PN  TY  +I+   R
Sbjct: 599 LCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAR 636



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 172/336 (51%), Gaps = 6/336 (1%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
           F  L+  + R G  + AI V + M  +    N    N VI++ C +G VD     E  ++
Sbjct: 280 FDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVD--DAFEFLNN 337

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G  PD I++ ++L    R G WE A+ L NEMV +    +  T+NT +  +C+   
Sbjct: 338 MGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGL 397

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +D A  ++ +MP    S  +VTY+ +++G+   GR+D AL +F+    L    + ++Y T
Sbjct: 398 IDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNS---LPCEPNTITYTT 454

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +L+      R + A  +  EM  +    + VT+N L+  + ++G  +E   + +QM    
Sbjct: 455 LLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHG 514

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
            +PNL+T++TL+D  ++    +EA+++       G+  D + YS+++D L +   +E AV
Sbjct: 515 CTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAV 574

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
            +   +   G+RP  V YN I+ A  +   T+  +D
Sbjct: 575 QMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAID 610



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 156/316 (49%), Gaps = 11/316 (3%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R G+ + AK +    + +        F+  I    + G   +AI +   M  Y     
Sbjct: 357 LCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVG 416

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
           +VTYNA+++  C +G VD    +E+F+ +     +P+ IT+ +LL         +AA  L
Sbjct: 417 IVTYNALVNGFCVQGRVD--SALELFNSL---PCEPNTITYTTLLTGLCHAERLDAAAEL 471

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
             EM+      ++ T+N L+   C+   ++ A E++ +M     +PN++T++T++DG  +
Sbjct: 472 LAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITE 531

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
               ++AL +   +   GI LD ++Y++++ + ++  R EEA+ +   ++  G+R  AV 
Sbjct: 532 DCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVM 591

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           YN +L    K+ + D     F  M ++   PN  TY  LI+  ++ GL KEA  +  E  
Sbjct: 592 YNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELC 651

Query: 502 QAGLKADVVLYSALID 517
             G     VL  +LI+
Sbjct: 652 SRG-----VLSKSLIE 662



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 185/395 (46%), Gaps = 20/395 (5%)

Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQG-----KLASAMISILGRL 206
           C  ++ TF  L+R     G   +AI+         +R ++ G      L + +I+ + + 
Sbjct: 273 CVPNEVTFDMLVRFFCRGGMVERAIEVL-------DRMSEHGCTANTTLCNIVINSICKQ 325

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+VD A        + G      +++ ++    R+G  ++A  + N M R N  PN VT+
Sbjct: 326 GRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTF 385

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N  I   C KG +D    + + + M   G     +T+N+L+      G  ++A  LFN +
Sbjct: 386 NTFICILCQKGLID--QAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL 443

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
                + +  TY TLL  +C   ++D A E++AEM   +   NVVT++ ++  + + G +
Sbjct: 444 ---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFV 500

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           ++A+ +  +M   G   + +++NT+L    +    EEAL +   + S GI  D +TY+++
Sbjct: 501 EEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSI 560

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +    ++ + +E  +MF  ++   + P  + Y+ ++    K      A+  F        
Sbjct: 561 VDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSC 620

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
             +   Y  LI+ L + GL++ A  +L E+   G+
Sbjct: 621 MPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 206/411 (50%), Gaps = 19/411 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRL-------GKVDL 211
           Y  LL  L  +G+ ++A + F   +++  + +         +SI G +       G +  
Sbjct: 312 YGLLLDYLCKKGKCTEARKLFDSMIRKGIKPD---------VSIYGIILHGYATKGALSE 362

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
             +  +  +  G     Y F+ +  A+ +     EA+ +FN M++  L PN+V Y  +ID
Sbjct: 363 MHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLID 422

Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
           A C  G VD   +   F+ M+  GV P+ + F SL+        WE A  LF EMV++GI
Sbjct: 423 ALCKLGRVDDAELK--FNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGI 480

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             ++  +NT++  +C   ++  A  ++  M      P++++Y+ +I G+   G+ D+A  
Sbjct: 481 HPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASK 540

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +   M  +G+  +  +YNT+L  Y + GR ++A  V +EM S+GI    VTYN +L G  
Sbjct: 541 LLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLF 600

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K  ++ E + ++  M       ++ TY+ +++  SK     EA+++F+      L+ D++
Sbjct: 601 KTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDII 660

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            ++ +I AL K+G  E A++L   ++  G+ P+V TY  I +      + E
Sbjct: 661 TFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLE 711



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 152/592 (25%), Positives = 253/592 (42%), Gaps = 67/592 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSA-LISAYGRSGYCQEAISVF-NSM 254
           S ++    R+G+++     F   L  G+          L+     +    EA+ V    M
Sbjct: 98  SILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGVLLRRM 157

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD--DMLRNG----VQPDRITFNSLLAV 308
                 PN+V+YN ++    KG  D     E  +   M+ +G      P+ +++N+++  
Sbjct: 158 SELGCTPNVVSYNTLL----KGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVING 213

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
               G  + A NLF +M  +GI  ++ TY  ++D +CK   +D A  +  +M  K + PN
Sbjct: 214 FFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPN 273

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
           +VTY+ +I GY   G+  + + M  EM   G+  D  +Y  +L    K G+  EA  +  
Sbjct: 274 IVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFD 333

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
            M   GI+ D   Y  +L GY  +G   E+    + M  + +SPN   ++ +   ++K  
Sbjct: 334 SMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKA 393

Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
           +  EAM IF + +Q GL  +VV Y+ LIDALCK G V+ A    ++M  EG+ PN+V + 
Sbjct: 394 MIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFT 453

Query: 549 SIIDAFGRSATTECTVDDVER------DLGKQKESANL----DAMC----------SQDD 588
           S++          CT+D  E+      ++  Q    N+      MC          +Q  
Sbjct: 454 SLVYGL-------CTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRL 506

Query: 589 KDVQEAGRTDNQIIK----VFGQLVAEKAGQ-----------GKKENRCRQEIL----CI 629
            D+ E   T   II     + G  +  K  +           G K N C    L    C 
Sbjct: 507 IDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCR 566

Query: 630 LG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA 682
            G       VFQ+M    I P VVT++ IL+   +   F +A  L   +     Q     
Sbjct: 567 DGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYT 626

Query: 683 HGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
           + +++    ++N   +AL +F  +   D       +N +   L   G+K  A
Sbjct: 627 YNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDA 678



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 182/361 (50%), Gaps = 3/361 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L +LG+VD A+  F   +NEG    +  F++L+         ++A  +F  M  
Sbjct: 418 ATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVN 477

Query: 257 YNLKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + PN+V +N ++ + C +G V       + D M R G +PD I++N+L+      G  
Sbjct: 478 QGIHPNVVFFNTIMCNLCTEGRV--MKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKT 535

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + A  L + M+  G+  +  TYNTLL   C+  ++D A+ +  EM +  I+P VVTY+T+
Sbjct: 536 DEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTI 595

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           + G  K  R  +A  ++  M   G      +YN +L+  +K    +EAL + + + S  +
Sbjct: 596 LHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDL 655

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
           + D +T+N ++G   K G+ ++   +F  + A+ + P++ TY  + +   + G  +E   
Sbjct: 656 QVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDG 715

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F E +++G   + ++ + L+  L   G +  A + L ++ ++       T + +I  F 
Sbjct: 716 MFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFS 775

Query: 556 R 556
           R
Sbjct: 776 R 776



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 132/581 (22%), Positives = 229/581 (39%), Gaps = 118/581 (20%)

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC------SRGGLWEAARNLFNEMVH-- 327
           G +     +++FD+ L +      I FN LLA              E   + FN M+   
Sbjct: 27  GSLSVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDC 86

Query: 328 -RGIDQDIFTYNTLLDAICKGAQMDLAFE------------------------------- 355
              +  D+FTY+ L+   C+  +++  F                                
Sbjct: 87  CSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRV 146

Query: 356 ------IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA---LNMFSEMKFLGIGLDRVS 406
                 ++  M     +PNVV+Y+T++ G+    R ++A   L+M ++ +      + VS
Sbjct: 147 GEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVS 206

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNTV++ +   G+ ++A  +  +M   GI  + VTY  ++ G  K    D    +F+QM 
Sbjct: 207 YNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMI 266

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V PN++TY+ LI  Y   G +KE +++ +E    GL+ D   Y  L+D LCK G   
Sbjct: 267 DKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCT 326

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A  L D M ++GI+P+V  Y  I+  +                         L  M S 
Sbjct: 327 EARKLFDSMIRKGIKPDVSIYGIILHGYATKGA--------------------LSEMHSF 366

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
            D  V      ++ I  +     A+KA  G+            + +F KM +  + PNVV
Sbjct: 367 LDLMVGNGISPNHYIFNIVFCAFAKKAMIGEA-----------MDIFNKMRQQGLSPNVV 415

Query: 647 TFSAILNACSRCNSFEDASMLLEEL---------RLFDNQVYGVAHGLLMGYRDNIWVQA 697
            ++ +++A  +    +DA +   ++          +F + VYG+          + W +A
Sbjct: 416 NYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLC-------TIDKWEKA 468

Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLH 757
             LF E+          F+N +   L   G+   AQ ++                     
Sbjct: 469 GELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLI--------------------D 508

Query: 758 LMSSGAARAMVHAW--LLNIHSIVFEGHELPKLLSILTGWG 796
           LM     R  + ++  L+  H +V +  E  KLL I+   G
Sbjct: 509 LMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVG 549


>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
 gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
          Length = 941

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 185/362 (51%), Gaps = 3/362 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I++  ++GKV  A  + +   + G  + +  +S LI+ + +      A +VF  + +  
Sbjct: 475 LINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDG 534

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           LKP++V YN +I A CG G +D    + +  +M +   +P   TF  ++   +R G    
Sbjct: 535 LKPDVVLYNNIIKAFCGMGNMD--RAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRR 592

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +F+ M   G    + T+N L+  + +  +M+ A EI+ EM    +SP+  TY+T++ 
Sbjct: 593 ALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMH 652

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GYA  G    A   F++M+  G+ LD  +Y  +L    K GR + AL V +EM +  I +
Sbjct: 653 GYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPR 712

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +   YN L+ G+ ++G   E   + +QM  + V P++ TY++ I+   K G    A +  
Sbjct: 713 NTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTM 772

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            E + AG+K +V  Y+ LI       L E A+S  +E+   G++P+   Y+ ++ +    
Sbjct: 773 EEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSR 832

Query: 558 AT 559
           AT
Sbjct: 833 AT 834



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 176/348 (50%), Gaps = 3/348 (0%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +F+     G+  +V  +  LI+ Y + G   +A+ V   MK   +K N+ TY+ +I+   
Sbjct: 456 VFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFL 515

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQD 333
           K   D+ +   +F+D++++G++PD + +N+++ A C  G + + A ++  EM        
Sbjct: 516 KLK-DWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNM-DRAIHMVKEMQKERCRPT 573

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             T+  ++    +  +M  A EI   M      P V T++ ++ G  +  +++ A+ +  
Sbjct: 574 SRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILD 633

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           EM   G+  D  +Y T++  YA LG   +A     +M + G++ D  TY ALL    K G
Sbjct: 634 EMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSG 693

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           +      +  +M A  +  N   Y+ LID +++ G   EA  + ++  Q G++ D+  Y+
Sbjct: 694 RMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYT 753

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + I+A CK G +  A   ++EM   G++PNV TY ++I  +  ++  E
Sbjct: 754 SFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPE 801



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 129/549 (23%), Positives = 246/549 (44%), Gaps = 43/549 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           M+    R G +  A+  FE+    G   + + +++LI AY      +EA+S    M    
Sbjct: 300 MVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEG 359

Query: 259 LKPNLVTYNAVIDACGKGG------VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           ++ +LVTY+ V+    K G        FK   E      R+      I  N + A C   
Sbjct: 360 IEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKE------RHTNLNAYIYGNIIYAYCQAC 413

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            + + A  L  EM   GID  +  Y+T++D        +    +   +     +P+V+TY
Sbjct: 414 NM-DRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITY 472

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
             +I+ Y K G++  AL +   MK +GI  +  +Y+ +++ + KL  +  A  V +++  
Sbjct: 473 GCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIK 532

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G++ D V YN ++  +   G  D    M ++M+ +   P   T+  +I  +++ G  + 
Sbjct: 533 DGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRR 592

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A++IF   +++G    V  ++AL+  L +   +E AV +LDEM   G+ P+  TY +I+ 
Sbjct: 593 ALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMH 652

Query: 553 AFGRSATTECTVDDVE--RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
            +     T    +     R+ G Q +    +A+     K   ++GR  +  + V  ++ A
Sbjct: 653 GYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALL----KACCKSGRMQSA-LAVTREMNA 707

Query: 611 EKAGQGKKENRC-------RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
           +K  +              R +I     + Q+M++  ++P++ T+++ +NAC +      
Sbjct: 708 QKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLR 767

Query: 664 ASMLLEEL---------RLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASA 714
           A+  +EE+         + +   ++G A+  L         +ALS F+E+KL       A
Sbjct: 768 ATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPE-------KALSCFEELKLAGLKPDKA 820

Query: 715 FYNALTDML 723
            Y+ L   L
Sbjct: 821 VYHCLMTSL 829



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 186/395 (47%), Gaps = 35/395 (8%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           +++ VV  F+ + +    P R  F  ++   +R G    AR  F  M  RGID     Y 
Sbjct: 278 NWQAVVSAFERIKK----PSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYT 333

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +L+ A   G  M+ A   + +M  + I  ++VTYS ++ G+AK G  + A   F + K  
Sbjct: 334 SLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKER 393

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
              L+   Y  ++  Y +    + A  + +EME  GI      Y+ ++ GY      ++ 
Sbjct: 394 HTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKC 453

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             +F+++K    +P+++TY  LI++Y+K G   +A+++ +  K  G+K ++  YS LI+ 
Sbjct: 454 LIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLING 513

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
             K     +A ++ +++ K+G++P+VV YN+II AF       C + +++R +   KE  
Sbjct: 514 FLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAF-------CGMGNMDRAIHMVKE-- 564

Query: 579 NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
                     +  +   RT   II  F      +AG+ ++           L +F  M +
Sbjct: 565 -------MQKERCRPTSRTFMPIIHGFA-----RAGEMRR----------ALEIFDMMRR 602

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
               P V TF+A++         E A  +L+E+ L
Sbjct: 603 SGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMAL 637



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 219/505 (43%), Gaps = 44/505 (8%)

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           Q  +S F  +K    KP+   +  ++    + G D     + F+ M   G+ P    + S
Sbjct: 280 QAVVSAFERIK----KPSRREFGLMVGYYARRG-DMHRARQTFESMRARGIDPSSHVYTS 334

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L+   + G   E A +   +M   GI+  + TY+ ++    K    + A     +   ++
Sbjct: 335 LIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERH 394

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
            + N   Y  +I  Y +A  +D A  +  EM+  GI      Y+T++  Y  +   E+ L
Sbjct: 395 TNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCL 454

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
           +V K ++  G     +TY  L+  Y K GK  +   + + MK+  +  N+ TYS LI+ +
Sbjct: 455 IVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGF 514

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            K   +  A  +F +  + GLK DVVLY+ +I A C  G ++ A+ ++ EM KE  RP  
Sbjct: 515 LKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTS 574

Query: 545 VTYNSIIDAFGRSATTECTVD--DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII 602
            T+  II  F R+      ++  D+ R  G        +A+           G  + + +
Sbjct: 575 RTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALV---------LGLVEKRKM 625

Query: 603 KVFGQLVAEKAGQGKKENRCRQEIL----CILG-------VFQKMHKLKIKPNVVTFSAI 651
           +   +++ E A  G   +      +      LG        F KM    ++ +V T+ A+
Sbjct: 626 EKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEAL 685

Query: 652 LNACSRCNSFEDASMLLEEL---RLFDNQ-VYGVAHGLLMGY--RDNIWVQALSLFDEVK 705
           L AC +    + A  +  E+   ++  N  VY +   L+ G+  R +IW +A  L  ++ 
Sbjct: 686 LKACCKSGRMQSALAVTREMNAQKIPRNTFVYNI---LIDGWARRGDIW-EAADLMQQMN 741

Query: 706 LM----DSSTASAFYNALT---DML 723
                 D  T ++F NA     DML
Sbjct: 742 QEGVQPDIHTYTSFINACCKAGDML 766



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 129/314 (41%), Gaps = 46/314 (14%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +++     G   +AI       K  ER     +    +I    R G++  A  IF+ 
Sbjct: 542 YNNIIKAFCGMGNMDRAIHMVKEMQK--ERCRPTSRTFMPIIHGFARAGEMRRALEIFDM 599

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G   TV+ F+AL+         ++A+ + + M    + P+  TY  ++      G 
Sbjct: 600 MRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALG- 658

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCS---------------------------- 310
           D     E F  M   G+Q D  T+ +LL  C                             
Sbjct: 659 DTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYN 718

Query: 311 --------RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
                   RG +WEAA +L  +M   G+  DI TY + ++A CK   M  A + M EM A
Sbjct: 719 ILIDGWARRGDIWEAA-DLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEA 777

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
             + PNV TY+T+I G+A A   + AL+ F E+K  G+  D+  Y+ +++         E
Sbjct: 778 AGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRATVAE 837

Query: 423 A------LLVCKEM 430
           A      L +C+EM
Sbjct: 838 AYIYSGILSICREM 851


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 223/469 (47%), Gaps = 26/469 (5%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           AF AL+ A+  +G  QEA+  F+ M  ++ +P    YNAV       GV     + +++ 
Sbjct: 146 AFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGV-ILLALALYNR 204

Query: 290 MLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           M+ +G  P+  T+  L+  +C RG   +A + +F+EM+ RGI  D+  Y  LL ++C   
Sbjct: 205 MVSSGCLPNSTTYIVLMDGLCKRGMAVDALK-MFDEMLERGIVPDVKIYTVLLSSLCNEG 263

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +++ A  ++  M      P+ VTY+  + G  KAGR+D+A + F  ++  G  L  + Y+
Sbjct: 264 RIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYS 323

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            ++    + GRF+E L    EM    I  D   Y  L+  + + G+  +   + ++MK  
Sbjct: 324 CLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDK 383

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
              P+   Y+TL+      G    A  +  E  Q  +  D   ++ +I  LCK GL++ A
Sbjct: 384 GFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKA 443

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
           + + DEM + G  P V+TYN++ID   R+   E       R L  + E  N  ++  +  
Sbjct: 444 MQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLE-----EARMLFHKMEMGNNPSLFLRLT 498

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
               +   T++    V G     ++GQ  K  +  + I+          +  + P+VVT+
Sbjct: 499 LGANQVRDTESLRKLVDGMC---QSGQVLKAYKLLRGII----------ESGVVPDVVTY 545

Query: 649 SAILNACSRCNSFEDASMLLEELRLF----DNQVYG-VAHGLLMGYRDN 692
           + ++N   +  + + A  L +EL+L     D   YG +  GL   +R+N
Sbjct: 546 NTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHREN 594



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 179/380 (47%), Gaps = 51/380 (13%)

Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           T + ++A+       G    A++++N M      PN  TY  ++D   K G+     +++
Sbjct: 178 TAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVD-ALKM 236

Query: 287 FDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           FD+ML  G+ PD   +  LL+ +C+ G + +A R L   M   G   D  TY   L  +C
Sbjct: 237 FDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGR-LLCSMKENGCPPDEVTYTVFLSGLC 295

Query: 346 KGAQMDLAF---EIM--------------------------------AEMPAKNISPNVV 370
           K  ++D AF   E++                                 EM  K+ISP++ 
Sbjct: 296 KAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDIT 355

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
            Y+ +I  +A+AGR  DA  +  EMK  G   D   YNT+L     +G  + A  +  EM
Sbjct: 356 LYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEM 415

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
             + +  D+ T+N ++ G  K+G  D+  ++F++M      P ++TY+ LID   + G+ 
Sbjct: 416 LQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGML 475

Query: 491 KEAMQIFRE---------FKQAGLKADVVL----YSALIDALCKNGLVESAVSLLDEMTK 537
           +EA  +F +         F +  L A+ V        L+D +C++G V  A  LL  + +
Sbjct: 476 EEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIE 535

Query: 538 EGIRPNVVTYNSIIDAFGRS 557
            G+ P+VVTYN++I+   ++
Sbjct: 536 SGVVPDVVTYNTLINGLCKA 555



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 191/394 (48%), Gaps = 17/394 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT LL  L N G    A +    ++K      D+    +  +S L + G+VD A + FE 
Sbjct: 252 YTVLLSSLCNEGRIEDAGRLLC-SMKENGCPPDEVTY-TVFLSGLCKAGRVDEAFHRFEL 309

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             + G+   +  +S LI    ++G   E +S +  M   ++ P++  Y  +I    + G 
Sbjct: 310 LQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGR 369

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K    + D+M   G  PD   +N+LL      G  + A++L +EM+   +  D  T+N
Sbjct: 370 T-KDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHN 428

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK-- 396
            ++  +CK   +D A ++  EM      P V+TY+ +IDG  +AG L++A  +F +M+  
Sbjct: 429 IMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMG 488

Query: 397 -----FLGIGL------DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
                FL + L      D  S   ++    + G+  +A  + + +  SG+  D VTYN L
Sbjct: 489 NNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTL 548

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  K    D   R+F++++   +SP+ +TY TLID   +     +A  +F+   ++G 
Sbjct: 549 INGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGG 608

Query: 506 KADVVLYSALIDALCKNGLVESAVSL-LDEMTKE 538
              + +Y+ ++ +LC+   +  A++L LD + K+
Sbjct: 609 FPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKK 642



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 163/396 (41%), Gaps = 34/396 (8%)

Query: 284 VEIFD---DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           V +FD   D    G+      F +L+   S  G  + A   F+ M         F YN +
Sbjct: 126 VAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAV 185

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
              +     + LA  +   M +    PN  TY  ++DG  K G   DAL MF EM   GI
Sbjct: 186 FQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGI 245

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             D   Y  +LS     GR E+A  +   M+ +G   D VTY   L G  K G+ DE   
Sbjct: 246 VPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFH 305

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
            FE ++    +  L+ YS LID   + G + E +  + E     +  D+ LY+ LI    
Sbjct: 306 RFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFA 365

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           + G  + A  LLDEM  +G  P+   YN+++ A          V +++R      E    
Sbjct: 366 EAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALF-------DVGNIDRAQSLMSEMLQN 418

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
           + +      ++   G     +I        +KA Q                VF +M +  
Sbjct: 419 NVVLDSTTHNIMICGLCKKGLI--------DKAMQ----------------VFDEMGEHG 454

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
             P V+T++A+++   R    E+A ML  ++ + +N
Sbjct: 455 CHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNN 490



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 101/411 (24%), Positives = 187/411 (45%), Gaps = 16/411 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  L  RG    A++ F   ++R    +   K+ + ++S L   G+++ A  +  +
Sbjct: 217 YIVLMDGLCKRGMAVDALKMFDEMLERGIVPD--VKIYTVLLSSLCNEGRIEDAGRLLCS 274

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G       ++  +S   ++G   EA   F  ++       L+ Y+ +ID   + G 
Sbjct: 275 MKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAG- 333

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            F   +  + +ML   + PD   +  L+   +  G  + A  L +EM  +G   D F YN
Sbjct: 334 RFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYN 393

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           TLL A+     +D A  +M+EM   N+  +  T++ MI G  K G +D A+ +F EM   
Sbjct: 394 TLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEH 453

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME-----SSGIR--------KDAVTYNAL 445
           G     ++YN ++    + G  EEA ++  +ME     S  +R        +D  +   L
Sbjct: 454 GCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKL 513

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + G  + G+  +  ++   +    V P+++TY+TLI+   K      A+++F+E +  G+
Sbjct: 514 VDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGI 573

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             D + Y  LID L +      A  L   + + G  P++  YN+++ +  R
Sbjct: 574 SPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCR 624



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 177/390 (45%), Gaps = 56/390 (14%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L + +I      G+   A  + +   ++G+    + ++ L+ A    G    A S+ + M
Sbjct: 356 LYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEM 415

Query: 255 KRYNLKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            + N+  +  T+N +I   C KG +D    +++FD+M  +G  P  +T+N+L+    R G
Sbjct: 416 LQNNVVLDSTTHNIMICGLCKKGLID--KAMQVFDEMGEHGCHPTVMTYNALIDGLYRAG 473

Query: 314 LWEAARNLFNEM-----------VHRGIDQ--DIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           + E AR LF++M           +  G +Q  D  +   L+D +C+  Q+  A++++  +
Sbjct: 474 MLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGI 533

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
               + P+VVTY+T+I+G  KA  LD AL +F E++  GI  D ++Y T++    +  R 
Sbjct: 534 IESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRE 593

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY--------------------DEV-- 458
            +A ++ + +  SG       YN ++    +  K                     DEV  
Sbjct: 594 NDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIA 653

Query: 459 --RRMFEQ----------MKADCV----SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             R+ FE           +K D V    +PN   Y+  +    +     +A++IF   ++
Sbjct: 654 NARKCFEDGFLDETVKELIKIDQVYGSLNPN--PYTIWVIGLCQVRKIDDALRIFHILEE 711

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLL 532
            G+       + LI+ LC +  + +AV ++
Sbjct: 712 FGIVVTPACCALLINYLCWDRNLNAAVDIM 741


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 203/393 (51%), Gaps = 3/393 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT  +R LG    + +A +  A  ++ E  K D     + +I +L   G++  AK++F  
Sbjct: 358 YTICIRVLGQAKRFDEAYRILA-KMENEGCKPDV-ITHTVLIQVLCDAGRISDAKDVFWK 415

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                       +  L+  +G +G  Q  + ++N+MK      N+V Y AVIDA  + G 
Sbjct: 416 MKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 475

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            F+  +E+FD+M + G+ P++ ++NSL++   +   +  A  LF  M   G   + +T+ 
Sbjct: 476 VFE-ALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHV 534

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
             ++   K  +   A +    M +K I P+VV  + ++ G AK+GRL  A  +F E+K +
Sbjct: 535 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 594

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D ++Y  ++   +K  +F+EA+ +  +M  +    D +  N+L+    K G+ DE 
Sbjct: 595 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 654

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            R+F Q+K   + P   TY+TL+    + G  KE M +  E   +    +++ Y+ ++D 
Sbjct: 655 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 714

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           LCKNG V  A+ +L  MT +G  P++ +YN++I
Sbjct: 715 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVI 747



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 140/257 (54%)

Query: 302  FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
            +NSL+       L + A  LF EM   G   D FTYN LLDA+ K  +++   ++  EM 
Sbjct: 883  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 942

Query: 362  AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
             K      VTY+T+I G  K+ RL+ A++++  +   G      +Y  +L    K GR E
Sbjct: 943  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 1002

Query: 422  EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
            +A  +  EM   G + +   YN LL G+   G  ++V  +F+ M    ++P++ +Y+ +I
Sbjct: 1003 DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 1062

Query: 482  DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
            D   K G   + +  FR+  + GL+ D++ Y+ LID L K+  +E AVSL +EM K+GI 
Sbjct: 1063 DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 1122

Query: 542  PNVVTYNSIIDAFGRSA 558
            PN+ TYNS+I   G++ 
Sbjct: 1123 PNLYTYNSLILHLGKAG 1139



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 131/565 (23%), Positives = 268/565 (47%), Gaps = 42/565 (7%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           L+R  G  G+ ++        ++R+  K + G  A A+   LG  G +  A         
Sbjct: 224 LMRGHGRVGDMAEVFD----VMQRQIVKANVGTFA-AIFGGLGVEGGLRSAPVALPVMKE 278

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
            G     Y ++ L+    +SG+ +EA+ V+  M    + P++ TY+ ++ A GK   D +
Sbjct: 279 AGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKR-RDVE 337

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            V+ +  +M  +GV+P+  ++   + V  +   ++ A  +  +M + G   D+ T+  L+
Sbjct: 338 TVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLI 397

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             +C   ++  A ++  +M   +  P+ VTY T++D +   G     + +++ MK  G  
Sbjct: 398 QVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYN 457

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + V+Y  V+    ++GR  EAL +  EM+  GI  +  +YN+L+ G+ K  ++ +   +
Sbjct: 458 DNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALEL 517

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F+ M      PN  T+   I+ Y K G   +A+Q +   K  G+  DVV  +A++  L K
Sbjct: 518 FKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 577

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
           +G +  A  +  E+   G+ P+ +TY  +I    +++  +  V  +  D+ +     ++ 
Sbjct: 578 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAV-KIFYDMIENNCVPDVL 636

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK------------AGQGKKENRCRQEILCI 629
           A+ S  D  + +AGR D +  ++F QL                AG G +E + ++    +
Sbjct: 637 AVNSLIDT-LYKAGRGD-EAWRIFYQLKEMNLEPTDGTYNTLLAGLG-REGKVKE----V 689

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA-SML--------LEELRLFDNQVYG 680
           + + ++M+     PN++T++ IL+   +  +  DA  ML        + +L  ++  +YG
Sbjct: 690 MHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 749

Query: 681 VAHGLLMGYRDNIWVQALSLFDEVK 705
           +        ++  + +A S+F ++K
Sbjct: 750 LV-------KEERYNEAFSIFCQMK 767



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 179/374 (47%), Gaps = 4/374 (1%)

Query: 189  KNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAI 248
            K D+    S M  IL + G ++ +    E   + G     +    LI    +     EA 
Sbjct: 807  KTDRSSCHSLMEGILKKAG-IEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAH 865

Query: 249  SVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE-IFDDMLRNGVQPDRITFNSLLA 307
             +    K + +      YN++I  CG    +   + E +F +M   G  PD  T+N LL 
Sbjct: 866  ELVKKFKSFGVSLKTGLYNSLI--CGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLD 923

Query: 308  VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
               +    E    +  EM  +G +    TYNT++  + K  +++ A ++   + ++  SP
Sbjct: 924  AMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSP 983

Query: 368  NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
               TY  ++DG  KAGR++DA N+F+EM   G   +   YN +L+ +   G  E+   + 
Sbjct: 984  TPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLF 1043

Query: 428  KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
            ++M   GI  D  +Y  ++    K G+ ++    F Q+    + P+L+TY+ LID   K 
Sbjct: 1044 QDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKS 1103

Query: 488  GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
               +EA+ +F E ++ G+  ++  Y++LI  L K G    A  + +E+  +G +PNV TY
Sbjct: 1104 KRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTY 1163

Query: 548  NSIIDAFGRSATTE 561
            N++I  +  S +T+
Sbjct: 1164 NALIRGYSVSGSTD 1177



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 157/660 (23%), Positives = 280/660 (42%), Gaps = 87/660 (13%)

Query: 132  VTAFARDDVSLGDILKKFE-FKLCGA--DDYTFLL--RELGNRGEWSKAIQCFAFAVKRE 186
            ++ F + D   GD L+ F+   + G   + YT +L     G  GE  KAIQ       R 
Sbjct: 502  ISGFLKAD-RFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ-------RY 553

Query: 187  ERKNDQGKL-----ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
            E    +G +      +A++  L + G++ +AK +F      G       ++ +I    ++
Sbjct: 554  ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKA 613

Query: 242  GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
                EA+ +F  M   N  P+++  N++ID   K G        IF  +    ++P   T
Sbjct: 614  SKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG-DEAWRIFYQLKEMNLEPTDGT 672

Query: 302  FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
            +N+LLA   R G  +   +L  EM H     ++ TYNT+LD +CK   ++ A +++  M 
Sbjct: 673  YNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMT 732

Query: 362  AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
             K   P++ +Y+T+I G  K  R ++A ++F +MK + I  D  +  T+L  + K+G  +
Sbjct: 733  TKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIP-DYATLCTILPSFVKIGLMK 791

Query: 422  EALLVCKE------------------------------------MESSGIRKDAVTYNAL 445
            EAL + K+                                    + SSGI  D      L
Sbjct: 792  EALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPL 851

Query: 446  LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
            +    KQ K  E   + ++ K+  VS     Y++LI       L   A  +F E K+ G 
Sbjct: 852  IKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGC 911

Query: 506  KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
              D   Y+ L+DA+ K+  +E  + + +EM ++G     VTYN+II    +S   E  + 
Sbjct: 912  GPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI- 970

Query: 566  DVERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQIIK--------VFGQLVA 610
            D+  +L  Q  S         LD +       +++A    N++++        ++  L+ 
Sbjct: 971  DLYYNLMSQGFSPTPCTYGPLLDGLLKAG--RIEDAENLFNEMLEYGCKANCTIYNILLN 1028

Query: 611  EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                 G  E  C         +FQ M    I P++ +++ I++   +     D      +
Sbjct: 1029 GHRIAGNTEKVCH--------LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQ 1080

Query: 671  LRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
            L     +   + + LL+    +     +A+SLF+E++          YN+L   + H G+
Sbjct: 1081 LLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSL---ILHLGK 1137



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 148/297 (49%), Gaps = 1/297 (0%)

Query: 247  AISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL 306
            A  +F  MK     P+  TYN ++DA GK  +  + ++++ ++M R G +   +T+N+++
Sbjct: 899  AEGLFAEMKELGCGPDEFTYNLLLDAMGKS-MRIEEMLKVQEEMHRKGYESTYVTYNTII 957

Query: 307  AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
            +   +    E A +L+  ++ +G      TY  LLD + K  +++ A  +  EM      
Sbjct: 958  SGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCK 1017

Query: 367  PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
             N   Y+ +++G+  AG  +   ++F +M   GI  D  SY  ++    K G+  + L  
Sbjct: 1018 ANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTY 1077

Query: 427  CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
             +++   G+  D +TYN L+ G GK  + +E   +F +M+   + PNL TY++LI    K
Sbjct: 1078 FRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGK 1137

Query: 487  GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
             G   EA +++ E    G K +V  Y+ALI     +G  +SA +    M   G  PN
Sbjct: 1138 AGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 214/477 (44%), Gaps = 36/477 (7%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            + ++  L + G V+ A ++  +   +G    + +++ +I    +     EA S+F  MK+
Sbjct: 709  NTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK 768

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
              L P+  T   ++ +  K G+  + +  I D  L+ G + DR + +SL+  +  + G+ 
Sbjct: 769  V-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIE 827

Query: 316  EAARNLFNEMV-HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            ++    F E++   GI  D F    L+  +CK  +   A E++ +  +  +S     Y++
Sbjct: 828  KSIE--FAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNS 885

Query: 375  MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
            +I G      +D A  +F+EMK LG G D  +YN +L    K  R EE L V +EM   G
Sbjct: 886  LICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKG 945

Query: 435  IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
                 VTYN ++ G  K  + ++   ++  + +   SP   TY  L+D   K G  ++A 
Sbjct: 946  YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 1005

Query: 495  QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             +F E  + G KA+  +Y+ L++     G  E    L  +M  +GI P++ +Y  IID  
Sbjct: 1006 NLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID-- 1063

Query: 555  GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
                 T C    +   L   ++              + E G   + I      L+ +  G
Sbjct: 1064 -----TLCKAGQLNDGLTYFRQ--------------LLEMGLEPDLITY---NLLIDGLG 1101

Query: 615  QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            + K+           + +F +M K  I PN+ T+++++    +     +A  + EEL
Sbjct: 1102 KSKRLEEA-------VSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1151



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 143/275 (52%), Gaps = 1/275 (0%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            ++  +G+  +++    + E    +GY +T   ++ +IS   +S   ++AI ++ ++    
Sbjct: 921  LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 980

Query: 259  LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
              P   TY  ++D   K G   +    +F++ML  G + +   +N LL      G  E  
Sbjct: 981  FSPTPCTYGPLLDGLLKAG-RIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKV 1039

Query: 319  RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +LF +MV +GI+ DI +Y  ++D +CK  Q++       ++    + P+++TY+ +IDG
Sbjct: 1040 CHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDG 1099

Query: 379  YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
              K+ RL++A+++F+EM+  GI  +  +YN+++    K G+  EA  + +E+ + G + +
Sbjct: 1100 LGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPN 1159

Query: 439  AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
              TYNAL+ GY   G  D     + +M      PN
Sbjct: 1160 VFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 133/327 (40%), Gaps = 47/327 (14%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           S N +L +    GR  +   V   M+   ++ +  T+ A+ GG G +G           M
Sbjct: 217 SCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVM 276

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           K   +  N  TY+ L+    K G  +EA++++R     G+   V  YS L+ A  K   V
Sbjct: 277 KEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDV 336

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK---------- 575
           E+ + LL EM   G++PNV +Y   I   G++       D+  R L K +          
Sbjct: 337 ETVLWLLREMEAHGVKPNVYSYTICIRVLGQAK----RFDEAYRILAKMENEGCKPDVIT 392

Query: 576 ESANLDAMCS----QDDKDV--------QEAGRT-------------DNQ-IIKVFGQLV 609
            +  +  +C      D KDV        Q+  R              D+Q +++++  + 
Sbjct: 393 HTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK 452

Query: 610 AEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
           A+             + LC +G       +F +M +  I P   +++++++   + + F 
Sbjct: 453 ADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFG 512

Query: 663 DASMLLEELRLFDNQVYGVAHGLLMGY 689
           DA  L + + +   +  G  H L + Y
Sbjct: 513 DALELFKHMDIHGPKPNGYTHVLFINY 539



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 3/171 (1%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
            Y  LL   G+R   +    C  F    ++  N   K  + +I  L + G+++     F  
Sbjct: 1023 YNILLN--GHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQ 1080

Query: 219  ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             L  G    +  ++ LI   G+S   +EA+S+FN M++  + PNL TYN++I   GK G 
Sbjct: 1081 LLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAG- 1139

Query: 279  DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
                  ++++++L  G +P+  T+N+L+   S  G  ++A   +  M+  G
Sbjct: 1140 KAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGG 1190


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 222/469 (47%), Gaps = 40/469 (8%)

Query: 208 KVDLAKN--IFETALNEGY---GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           K+D++K+  +F   L   Y   G+    F         +G+  EA  +F+ + RY +  +
Sbjct: 146 KIDVSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVS 205

Query: 263 LVTYNAVID--ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           + + N  +   +C   G+  K  V++F++    GV  + ++ N +L    + G    A N
Sbjct: 206 VDSCNLFLSRLSCNFEGI--KIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHN 263

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           L  +M  RG   D+ +Y  ++   C+  ++D   +++ E+  K + P+   Y+ +I    
Sbjct: 264 LLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLC 323

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K G + +A  +   M+  G+  D V Y TV+S + KLG    A  +  EM    I  D V
Sbjct: 324 KNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIV 383

Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
           TY +++ G  K GK  E R MF +M    + P+ +TY+ LID Y K G  KEA  +  + 
Sbjct: 384 TYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQM 443

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
            Q GL  +VV Y+AL D LCKNG ++ A  LL EM+++G++PNV TYN+I++   +    
Sbjct: 444 VQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNI 503

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
           E TV  +E                     ++  AG   + I          K G+  K +
Sbjct: 504 EQTVKLME---------------------EMDLAGFYPDTITYTTLMDAYCKMGEMAKAH 542

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
               E+L I      M   +++P +VTF+ ++N        ED   L+E
Sbjct: 543 ----ELLRI------MLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIE 581



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 237/518 (45%), Gaps = 38/518 (7%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L +LGKV  A N+     + G    V ++  ++S Y R G   + + + + +K   LKP+
Sbjct: 252 LCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPD 311

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
              YN +I    K G +     ++   M + GV PD + + ++++   + G   AA  LF
Sbjct: 312 EYIYNNIILLLCKNG-EVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLF 370

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           +EM  + I  DI TY +++  ICK  +M  A E+  EM  K + P+ VTY+ +IDGY KA
Sbjct: 371 DEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKA 430

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
           G + +A ++ ++M   G+  + V+Y  +     K G  + A  +  EM   G++ +  TY
Sbjct: 431 GEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTY 490

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           N ++ G  K G  ++  ++ E+M      P+ +TY+TL+D Y K G   +A ++ R    
Sbjct: 491 NTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLN 550

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
             L+  +V ++ L++  C +G++E    L++ M ++GI PN  T+NS++  +       C
Sbjct: 551 KRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQY-------C 603

Query: 563 TVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
                     K    A  +   +  D+ V     T N +IK          G  K  N  
Sbjct: 604 I---------KNNMRATTEIYKAMHDRGVMPDSNTYNILIK----------GHCKARNMK 644

Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQV 678
               L      ++M +        T+ A++    +   F +A  L EE+R    + +  +
Sbjct: 645 EAWFL-----HKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDI 699

Query: 679 YGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFY 716
           Y +   +   Y +  W   L L DE     S T    Y
Sbjct: 700 YDIFVDV--NYEEGNWEITLELCDEFMTELSGTIFVVY 735



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 235/522 (45%), Gaps = 36/522 (6%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK-RYNLKPNLVTYN 267
           + +A  +FE     G      + + ++    + G  +EA ++   M  R N    +    
Sbjct: 223 IKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGV 282

Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
            V   C  G +D   V+++ D++   G++PD   +N+++ +  + G    A  L   M  
Sbjct: 283 VVSGYCRIGELD--KVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRK 340

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G+  D   Y T++   CK   +  A ++  EM  K I P++VTY+++I G  K+G++ +
Sbjct: 341 WGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVE 400

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A  MF+EM   G+  D V+Y  ++  Y K G  +EA  V  +M   G+  + VTY AL  
Sbjct: 401 AREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALAD 460

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
           G  K G+ D    +  +M    + PN+ TY+T+++   K G  ++ +++  E   AG   
Sbjct: 461 GLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYP 520

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           D + Y+ L+DA CK G +  A  LL  M  + ++P +VT+N +++ F  S   E    D 
Sbjct: 521 DTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLE----DG 576

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
           ER +    E            K +     T N ++K +           K   R   EI 
Sbjct: 577 ERLIEWMLE------------KGIMPNATTFNSLMKQYCI---------KNNMRATTEI- 614

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM 687
                ++ MH   + P+  T++ ++    +  + ++A  L +E+      V    +  L+
Sbjct: 615 -----YKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALI 669

Query: 688 G--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
              Y+   +V+A  LF+E++          Y+   D+ +  G
Sbjct: 670 RGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEG 711



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 184/382 (48%), Gaps = 7/382 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT ++      G  S A  C  F   R ++        +++I  + + GK+  A+ +F  
Sbjct: 350 YTTVISGFCKLGNVSAA--CKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNE 407

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            L +G       ++ALI  Y ++G  +EA SV N M +  L PN+VTY A+ D  C  G 
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGE 467

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           +D  +  E+  +M R G+QP+  T+N+++  +C  G + E    L  EM   G   D  T
Sbjct: 468 IDVAN--ELLHEMSRKGLQPNVYTYNTIVNGLCKIGNI-EQTVKLMEEMDLAGFYPDTIT 524

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y TL+DA CK  +M  A E++  M  K + P +VT++ +++G+  +G L+D   +   M 
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWML 584

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             GI  +  ++N+++  Y           + K M   G+  D+ TYN L+ G+ K     
Sbjct: 585 EKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMK 644

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E   + ++M     S    TY  LI  + K   + EA ++F E ++ GL A+  +Y   +
Sbjct: 645 EAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704

Query: 517 DALCKNGLVESAVSLLDEMTKE 538
           D   + G  E  + L DE   E
Sbjct: 705 DVNYEEGNWEITLELCDEFMTE 726



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 175/369 (47%), Gaps = 1/369 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS   +LG V  A  +F+    +     +  ++++I    +SG   EA  +FN M  
Sbjct: 351 TTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLV 410

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L+P+ VTY A+ID   K G + K    + + M++ G+ P+ +T+ +L     + G  +
Sbjct: 411 KGLEPDEVTYTALIDGYCKAG-EMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEID 469

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L +EM  +G+  +++TYNT+++ +CK   ++   ++M EM      P+ +TY+T++
Sbjct: 470 VANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLM 529

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y K G +  A  +   M    +    V++N +++ +   G  E+   + + M   GI 
Sbjct: 530 DAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIM 589

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +A T+N+L+  Y  +        +++ M    V P+  TY+ LI  + K    KEA  +
Sbjct: 590 PNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFL 649

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +E  + G       Y ALI    K      A  L +EM K G+      Y+  +D    
Sbjct: 650 HKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYE 709

Query: 557 SATTECTVD 565
               E T++
Sbjct: 710 EGNWEITLE 718



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 7/263 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +++ L ++G ++    + E     G+      ++ L+ AY + G   +A  +   M  
Sbjct: 491 NTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLN 550

Query: 257 YNLKPNLVTYNAVIDACGKGGV--DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGG 313
             L+P LVT+N +++     G+  D + ++E    ML  G+ P+  TFNSL+   C +  
Sbjct: 551 KRLQPTLVTFNVLMNGFCMSGMLEDGERLIEW---MLEKGIMPNATTFNSLMKQYCIKNN 607

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           +  A   ++  M  RG+  D  TYN L+   CK   M  A+ +  EM  K  S    TY 
Sbjct: 608 M-RATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYD 666

Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            +I G+ K  +  +A  +F EM+  G+  ++  Y+  + +  + G +E  L +C E  + 
Sbjct: 667 ALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTE 726

Query: 434 GIRKDAVTYNALLGGYGKQGKYD 456
                 V Y     G   +  +D
Sbjct: 727 LSGTIFVVYICFFIGGSVESNFD 749


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 219/458 (47%), Gaps = 32/458 (6%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD A   F   L   +   +  F+ ++ ++ +  +    +S+   ++   ++P+  T N 
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 269 VIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           +I+  C  G ++      +   +L+ G QPD +T  +L+      G  + A +  ++++ 
Sbjct: 104 LINCFCHLGQINL--AFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLA 161

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           +G   D  +Y TL++ +CK  +   A +++  +  +   PNVV Y+T+ID   K   + +
Sbjct: 162 QGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSE 221

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A N+FSEM   GI  + V+Y+ ++  +  +G+  EAL    EM    I  D   YN L+ 
Sbjct: 222 ACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVD 281

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
              K+GK  E + +   +   C+ PN++TY+TLID Y+K         +F      G+  
Sbjct: 282 ALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK--------HVFNAVGLMGVTP 333

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           DV  Y+ +I+ LCK   VE A++L  EM ++ + PN VTYNS+ID   +S       D +
Sbjct: 334 DVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLI 393

Query: 568 ERDLGKQKESAN-------LDAMCS--QDDKDVQEAGRTDNQIIK----VFGQLVAEKAG 614
           + ++  +   AN       ++ +C   Q DK +    +  +Q I+        L+     
Sbjct: 394 D-EMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLC 452

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAIL 652
           +GK+    +       G+FQ +      PNV T++ I+
Sbjct: 453 KGKRLKNAQ-------GLFQDLLDKGYHPNVYTYNIII 483



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 191/394 (48%), Gaps = 31/394 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L   G+V  A +  +  L +G+     ++  LI+   + G  + AI +   +  
Sbjct: 137 TTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDG 196

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
              +PN+V YN +ID   K  +       +F +M   G+  + +T+++++   C  G L 
Sbjct: 197 RLTEPNVVMYNTIIDCLCKRKL-VSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLT 255

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           EA     NEMV + I+ D++ YNTL+DA+ K  ++  A  ++A +    + PNV+TY+T+
Sbjct: 256 EAL-GFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTL 314

Query: 376 IDGYAK---------------------------AGRLDDALNMFSEMKFLGIGLDRVSYN 408
           IDGYAK                             R+++ALN++ EM    +  + V+YN
Sbjct: 315 IDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYN 374

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           +++    K GR   A  +  EM   G   + +TYN+L+ G  K G+ D+   +  +MK  
Sbjct: 375 SLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQ 434

Query: 469 CVSPNLLTYSTLID-VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
            + P++ T + L+  +  KG   K A  +F++    G   +V  Y+ +I   CK GL++ 
Sbjct: 435 GIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDE 494

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           A +L  +M   G  PN +T+  II A      T+
Sbjct: 495 AYALQSKMEDSGCSPNAITFKIIICALLEKGETD 528



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 191/390 (48%), Gaps = 47/390 (12%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALIS---------------------- 236
           +I+    LG+++LA ++    L  GY       + LI                       
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 237 ------AYGR--SGYCQ-----EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV 283
                 +YG   +G C+      AI +   +     +PN+V YN +ID   K  +     
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKL-VSEA 222

Query: 284 VEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             +F +M   G+  + +T+++++   C  G L EA     NEMV + I+ D++ YNTL+D
Sbjct: 223 CNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEAL-GFLNEMVLKAINPDVYIYNTLVD 281

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
           A+ K  ++  A  ++A +    + PNV+TY+T+IDGYAK        ++F+ +  +G+  
Sbjct: 282 ALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK--------HVFNAVGLMGVTP 333

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           D  SYN +++   K+ R EEAL + KEM    +  + VTYN+L+ G  K G+      + 
Sbjct: 334 DVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLI 393

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA-LCK 521
           ++M       N++TY++LI+   K G   +A+ +  + K  G++ D+   + L+   LCK
Sbjct: 394 DEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCK 453

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
              +++A  L  ++  +G  PNV TYN II
Sbjct: 454 GKRLKNAQGLFQDLLDKGYHPNVYTYNIII 483



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 191/383 (49%), Gaps = 12/383 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  L+  +   GE   AIQ       R    N    + + +I  L +   V  A N+F  
Sbjct: 171 YGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVV--MYNTIIDCLCKRKLVSEACNLFSE 228

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G    V  +SA+I  +   G   EA+   N M    + P++  YN ++DA  K G 
Sbjct: 229 MSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEG- 287

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K    +   +++  ++P+ IT+N+L+           A+++FN +   G+  D+++YN
Sbjct: 288 KVKEAKNVLAVIVKTCLKPNVITYNTLID--------GYAKHVFNAVGLMGVTPDVWSYN 339

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            +++ +CK  +++ A  +  EM  KN+ PN VTY+++IDG  K+GR+  A ++  EM   
Sbjct: 340 IMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDR 399

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK-YDE 457
           G   + ++YN++++   K G+ ++A+ +  +M+  GI+ D  T N LL G   +GK    
Sbjct: 400 GHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKN 459

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            + +F+ +      PN+ TY+ +I  + K GL  EA  +  + + +G   + + +  +I 
Sbjct: 460 AQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIIC 519

Query: 518 ALCKNGLVESAVSLLDEMTKEGI 540
           AL + G  + A  LL EM   G+
Sbjct: 520 ALLEKGETDKAEKLLCEMIARGL 542



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 184/393 (46%), Gaps = 18/393 (4%)

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F  ML     P  I FN +L   ++   +    +L   +  + I  D FT N L++  C 
Sbjct: 51  FHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCH 110

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             Q++LAF +++++      P+ VT +T+I G    G++  AL+   ++   G  LD+VS
Sbjct: 111 LGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVS 170

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y T+++   K+G    A+ + + ++      + V YN ++    K+    E   +F +M 
Sbjct: 171 YGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMS 230

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              +S N++TYS +I  +   G   EA+    E     +  DV +Y+ L+DAL K G V+
Sbjct: 231 VKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVK 290

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A ++L  + K  ++PNV+TYN++ID + +       +  V  D+     +  ++ +C  
Sbjct: 291 EAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSY--NIMINRLCKI 348

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKL 639
             K V+EA       + ++ ++  +             + LC  G       +  +MH  
Sbjct: 349 --KRVEEA-------LNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDR 399

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
               NV+T+++++N   +    + A  L+ +++
Sbjct: 400 GHHANVITYNSLINGLCKNGQLDKAIALINKMK 432



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 122/227 (53%), Gaps = 2/227 (0%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           AK++F      G    V++++ +I+   +    +EA++++  M + N+ PN VTYN++ID
Sbjct: 319 AKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLID 378

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              K G    +  ++ D+M   G   + IT+NSL+    + G  + A  L N+M  +GI 
Sbjct: 379 GLCKSG-RISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQ 437

Query: 332 QDIFTYNTLLDAI-CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
            D++T N LL  + CKG ++  A  +  ++  K   PNV TY+ +I G+ K G LD+A  
Sbjct: 438 PDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYA 497

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           + S+M+  G   + +++  ++    + G  ++A  +  EM + G+ K
Sbjct: 498 LQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLLK 544


>gi|302781572|ref|XP_002972560.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
 gi|300160027|gb|EFJ26646.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
          Length = 341

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 174/337 (51%), Gaps = 6/337 (1%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           + +S ++  Y   G  ++A+++   MK   +  N   YN ++    K G + K  +++  
Sbjct: 5   FTYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKE-KEALDLLH 63

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M      PD  T+N L+    + G  E A+ L   M  R    DI TYNTL+  +C+  
Sbjct: 64  SMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKG 123

Query: 349 ----QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
               +++ AF +  EM  K  +P  VTY+ +ID   +    + A  +   M   G   D 
Sbjct: 124 NGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDL 183

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V+YN +++ +AK G  ++A+ +  EM + G   D VTYN+++ G+ K GK +E  ++F +
Sbjct: 184 VTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAE 243

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           MKA  + PN  TY+++ D   K G  ++A     E ++ GL  D + Y ALI  +CK G 
Sbjct: 244 MKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL-VDAISYVALISTICKLGK 302

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            +    LL EM ++G +PN+VT+N + +A  + + T+
Sbjct: 303 GKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTD 339



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 166/331 (50%), Gaps = 6/331 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ ++R     GE  +A+         E   N   KL + +++ L + GK   A ++  +
Sbjct: 7   YSTIVRGYCEDGETRQALALLEHMKNAEVPAN--AKLYNIILTHLCKHGKEKEALDLLHS 64

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
                    +Y ++ LI+A  + G  ++A  +   M+  +   ++VTYN +I   C KG 
Sbjct: 65  MATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKGN 124

Query: 278 VDFK--HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
             F+      +F++M+  G  P  +T+  ++    R  + E A+ + + M   G   D+ 
Sbjct: 125 GRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLV 184

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TYN L++   K   MD A ++  EMP +   P+VVTY++++DG+ KAG++++A  +F+EM
Sbjct: 185 TYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEM 244

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           K  GI  +  +Y ++     K GR ++A     EM   G+  DA++Y AL+    K GK 
Sbjct: 245 KARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL-VDAISYVALISTICKLGKG 303

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
               ++  +M      PNL+T++ + +  SK
Sbjct: 304 KLGFQLLREMLEKGFKPNLVTFNVVFEALSK 334



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 176/375 (46%), Gaps = 40/375 (10%)

Query: 296 QPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
           Q +  T+++++      G    A  L   M +  +  +   YN +L  +CK  +   A +
Sbjct: 1   QANAFTYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALD 60

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++  M   + +P++ TY+ +I+   K GRL+DA  +   M+      D V+YNT++    
Sbjct: 61  LLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLC 120

Query: 416 KLG----RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
           + G    R E A  + +EM   G    +VTY  ++    +    ++ +++ + M  +  +
Sbjct: 121 RKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCA 180

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
            +L+TY+ LI+ ++K G+  +AM +F E    G   DVV Y++++D  CK G VE A  L
Sbjct: 181 FDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKL 240

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDV 591
             EM   GI PN  TY SI DA  ++   +    D    L + ++   +DA+        
Sbjct: 241 FAEMKARGIFPNGRTYTSITDACLKAGRMQ----DAHAYLVEMRKEGLVDAI-------- 288

Query: 592 QEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG--VFQKMHKLKIKPNVVTFS 649
                     + +   +   K G+GK            LG  + ++M +   KPN+VTF+
Sbjct: 289 --------SYVALISTIC--KLGKGK------------LGFQLLREMLEKGFKPNLVTFN 326

Query: 650 AILNACSRCNSFEDA 664
            +  A S+ ++ +DA
Sbjct: 327 VVFEALSKESNTDDA 341



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 136/263 (51%), Gaps = 6/263 (2%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSG----YCQEAISVFNSM 254
           +I+ L ++G+++ A+ + E          +  ++ LI    R G      + A  +F  M
Sbjct: 80  LINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEM 139

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
                 P  VTY  VIDA  +  +D +   ++ D M  NG   D +T+N L+   ++ G+
Sbjct: 140 VDKGHTPTSVTYTVVIDALLRVKMD-EQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGM 198

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            + A +LF EM  RG   D+ TYN+++D  CK  +++ A ++ AEM A+ I PN  TY++
Sbjct: 199 MDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTS 258

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           + D   KAGR+ DA     EM+  G+ +D +SY  ++S   KLG+ +    + +EM   G
Sbjct: 259 ITDACLKAGRMQDAHAYLVEMRKEGL-VDAISYVALISTICKLGKGKLGFQLLREMLEKG 317

Query: 435 IRKDAVTYNALLGGYGKQGKYDE 457
            + + VT+N +     K+   D+
Sbjct: 318 FKPNLVTFNVVFEALSKESNTDD 340



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 2/192 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  L R+   + A+ + +     G    +  ++ LI+ + ++G   +A+ +F  M  
Sbjct: 152 TVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPT 211

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++VTYN+V+D   K G   +   ++F +M   G+ P+  T+ S+   C + G  +
Sbjct: 212 RGCIPDVVTYNSVVDGFCKAG-KVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQ 270

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A     EM   G+  D  +Y  L+  ICK  +  L F+++ EM  K   PN+VT++ + 
Sbjct: 271 DAHAYLVEMRKEGL-VDAISYVALISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVF 329

Query: 377 DGYAKAGRLDDA 388
           +  +K    DDA
Sbjct: 330 EALSKESNTDDA 341



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 43/275 (15%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y+T++  Y + G   +AL + + M+++ +  +A  YN +L    K GK  E   +   M
Sbjct: 6   TYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLLHSM 65

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG-- 523
                +P++ TY+ LI+   K G  ++A  +    +      D+V Y+ LI  LC+ G  
Sbjct: 66  ATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKGNG 125

Query: 524 --LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
              VE A  L +EM  +G  P  VTY  +IDA  R          V+ D   QK    LD
Sbjct: 126 RFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLR----------VKMDEQAQKV---LD 172

Query: 582 AM----CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
            M    C+ D         T N +I  F      KAG   K           + +F +M 
Sbjct: 173 LMHENGCAFD-------LVTYNMLINRFA-----KAGMMDKA----------MDLFVEMP 210

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
                P+VVT++++++   +    E+A+ L  E++
Sbjct: 211 TRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMK 245


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 202/389 (51%), Gaps = 17/389 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-------SAMISILGRLGKVDL 211
           Y  L+  L   GE   A++          R+ND GKL        + +I  + +   V+ 
Sbjct: 301 YGTLINGLCKVGETKAALELL--------RRND-GKLVQPDVVMYNTIIDGMCKDKHVND 351

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A +++   +++     V+ ++ALIS +   G  ++AI +FN M   N+ P++ T++ ++D
Sbjct: 352 AFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVD 411

Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
              K G + K    +   M++  ++PD +T++SL+           A ++FN M HRG+ 
Sbjct: 412 GFCKDG-NIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVT 470

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            ++ +YN +++  CK   +D A ++  EM  K I P+V+TYS++IDG  K+GR+  AL +
Sbjct: 471 ANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALEL 530

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
             EM + G   D ++YN++L    K    ++A+ +  +++  GIR D  TY  L+ G  +
Sbjct: 531 VDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQ 590

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            GK ++ R++FE +     + ++  Y+ +I  +   GL+ EA+ +  + ++ G   D   
Sbjct: 591 SGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKT 650

Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGI 540
           Y  +I +L +    + A  LL EM   G+
Sbjct: 651 YEIIILSLFEKDENDMAEKLLREMIMRGL 679



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 167/298 (56%), Gaps = 3/298 (1%)

Query: 260 KPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           +P+ +T    I   C KG +     +   D ++  G   D++++ +L+    + G  +AA
Sbjct: 260 EPDTITLTTFIKGFCLKGQI--HQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L      + +  D+  YNT++D +CK   ++ AF++ +E  +K I P+V TY+ +I G
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           +   G+L DA+++F++M    I  D  +++ ++  + K G  +EA  V   M    I+ D
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VTY++L+ GY    + ++   +F  M    V+ N+ +Y+ +I+ + K  +  EAM++F+
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFK 497

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           E     +  DV+ YS+LID LCK+G +  A+ L+DEM   G +P+++TYNSI+DA  +
Sbjct: 498 EMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCK 555



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 177/342 (51%), Gaps = 1/342 (0%)

Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
           L  GY       +  I  +   G   +A+   + +       + V+Y  +I+   K G +
Sbjct: 255 LKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG-E 313

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
            K  +E+        VQPD + +N+++    +      A +L++E V + I  D+FTYN 
Sbjct: 314 TKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNA 373

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+   C   ++  A ++  +M +KNI P+V T+S ++DG+ K G + +A N+ + M    
Sbjct: 374 LISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQS 433

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           I  D V+Y++++  Y  +    +A  +   M   G+  +  +YN ++ G+ K    DE  
Sbjct: 434 IKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAM 493

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++F++M    + P+++TYS+LID   K G    A+++  E    G + D++ Y++++DAL
Sbjct: 494 KLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDAL 553

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           CK   V+ A++LL ++  +GIRP++ TY  ++    +S   E
Sbjct: 554 CKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLE 595



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 188/352 (53%), Gaps = 9/352 (2%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G++  A +  +  +  G+     ++  LI+   + G  + A+ +        ++P++V Y
Sbjct: 277 GQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMY 336

Query: 267 NAVIDACGKGGVDFKHVVEIFD---DMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLF 322
           N +ID   K     KHV + FD   + +   + PD  T+N+L++  C  G L +A  +LF
Sbjct: 337 NTIIDGMCKD----KHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI-DLF 391

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
           N+M  + I  D++T++ L+D  CK   +  A  ++A M  ++I P+VVTYS+++DGY   
Sbjct: 392 NKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLV 451

Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
             ++ A ++F+ M   G+  +  SYN +++ + K+   +EA+ + KEM    I  D +TY
Sbjct: 452 NEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITY 511

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
           ++L+ G  K G+      + ++M      P+++TY++++D   K     +A+ +  + K 
Sbjct: 512 SSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKG 571

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            G++ D+  Y+ L+  LC++G +E A  + +++  +G   +V  Y  +I  F
Sbjct: 572 QGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGF 623



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 169/325 (52%), Gaps = 3/325 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V  ++ +I    +  +  +A  +++      + P++ TYNA+I   C  G +  K  +++
Sbjct: 333 VVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKL--KDAIDL 390

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           F+ M    + PD  TF+ L+    + G  + A+N+   M+ + I  D+ TY++L+D  C 
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL 450

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +++ A  I   M  + ++ NV +Y+ MI+G+ K   +D+A+ +F EM    I  D ++
Sbjct: 451 VNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT 510

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y++++    K GR   AL +  EM   G + D +TYN++L    K+   D+   +  ++K
Sbjct: 511 YSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLK 570

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + P++ TY+ L+    + G  ++A ++F +    G   DV  Y+ +I   C  GL +
Sbjct: 571 GQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFD 630

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSII 551
            A++LL +M + G  P+  TY  II
Sbjct: 631 EALALLSKMEENGCIPDAKTYEIII 655



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 211/426 (49%), Gaps = 49/426 (11%)

Query: 290 MLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +L+NG +PD IT  + +   C +G + +A  +  ++++  G   D  +Y TL++ +CK  
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQAL-HFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +   A E++     K + P+VV Y+T+IDG  K   ++DA +++SE     I  D  +YN
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            ++S +  +G+ ++A+ +  +M S  I  D  T++ L+ G+ K G   E + +   M   
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + P+++TYS+L+D Y       +A  IF      G+ A+V  Y+ +I+  CK  +V+ A
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DLGKQKE----SANLDA 582
           + L  EM  + I P+V+TY+S+ID   +S      ++ V+     G+Q +    ++ LDA
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
           +C +           D  I      L+ +  GQG                        I+
Sbjct: 553 LCKKH--------HVDKAI-----TLLTKLKGQG------------------------IR 575

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEELRL--FDNQVYGVAHGLLMGYRDN-IWVQALS 699
           P++ T++ ++    +    EDA  + E+L +  ++  VY     ++ G+ D  ++ +AL+
Sbjct: 576 PDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYT-VMIQGFCDKGLFDEALA 634

Query: 700 LFDEVK 705
           L  +++
Sbjct: 635 LLSKME 640


>gi|255661194|gb|ACU25766.1| pentatricopeptide repeat-containing protein [Neosparton
           ephedroides]
          Length = 426

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 221/444 (49%), Gaps = 36/444 (8%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y +S LI+ +G+ G    A+S    M++  +  +LV Y+ +I+   K   D+   + IF 
Sbjct: 10  YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKL-CDYSKAISIFS 68

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            + R+G  PD + +NS++ V  +  L+  AR+L NEM   G+  D  +Y TLL    +  
Sbjct: 69  RLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVENK 128

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +   A  + AEM       ++ T + MID Y + G   +A  +F  M+ +GI  + VSYN
Sbjct: 129 RFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYN 188

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+L +Y     F EA+ + + M+   I ++ VTYN+++  YGK  ++++   + ++M+  
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNR 248

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + PN +TYST+I ++ K G    A  +F++ + +G++ D VLY  +I A  + GLV  A
Sbjct: 249 GIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHA 308

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
             LL E+     RP+ +  ++ I     +              G+ +E+  +        
Sbjct: 309 KRLLHELK----RPDNIPRDTAIHILAAA--------------GRLEEATWV-------F 343

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
           +   +AG   +  I VF +L+   +   K  N        ++ VF KM + +  P+    
Sbjct: 344 RQAIDAGEVKD--ITVFERLIHLFSKYKKYSN--------VVEVFDKMRERRYFPDSNVI 393

Query: 649 SAILNACSRCNSFEDASMLLEELR 672
           + +LNA  + + FE A+ +  E++
Sbjct: 394 ALVLNAYGKLHEFEKANSVYMEMQ 417



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 143/258 (55%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
            + PDR T+++L+    + GL++AA +   +M    +  D+  Y+ L++   K      A
Sbjct: 4   ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             I + +     +P++V Y++MI+ + KA    +A ++ +EM+  G+  D VSY T+L++
Sbjct: 64  ISIFSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTM 123

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           + +  RF EAL V  EM       D  T N ++  YG+ G   E  ++F  M+   + PN
Sbjct: 124 HVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPN 183

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           +++Y+TL+ VY    L+ EA+ +FR  ++  ++ +VV Y++++    K    E A +L+ 
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQ 243

Query: 534 EMTKEGIRPNVVTYNSII 551
           EM   GI PN +TY++II
Sbjct: 244 EMQNRGIEPNSITYSTII 261



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/404 (25%), Positives = 195/404 (48%), Gaps = 13/404 (3%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKVDLA 212
           D YT+  L+   G  G +  A+      +++ E+    G L   S +I +  +L     A
Sbjct: 8   DRYTYSTLITHFGKEGLFDAALSW----LQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
            +IF      G+   + A++++I+ + ++   +EA S+ N M+   + P+ V+Y  ++  
Sbjct: 64  ISIFSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTM 123

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
             +    F   + +F +M       D  T N ++ V  + G+ + A  LF  M   GI+ 
Sbjct: 124 HVENK-RFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEP 182

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           ++ +YNTLL           A  +   M  KNI  NVVTY++M+  Y K    + A N+ 
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            EM+  GI  + ++Y+T++SI+ K+G+ + A ++ +++ +SG+  D V Y  ++  Y + 
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERA 302

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G     +R+  ++K     P+ +   T I + +  G  +EA  +FR+   AG   D+ ++
Sbjct: 303 GLVAHAKRLLHELK----RPDNIPRDTAIHILAAAGRLEEATWVFRQAIDAGEVKDITVF 358

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             LI    K     + V + D+M +    P+      +++A+G+
Sbjct: 359 ERLIHLFSKYKKYSNVVEVFDKMRERRYFPDSNVIALVLNAYGK 402



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 183/371 (49%), Gaps = 11/371 (2%)

Query: 171 EWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTV 228
           ++SKAI  F+    R +R      L +  +MI++  +      A+++       G     
Sbjct: 59  DYSKAISIFS----RLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDT 114

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
            +++ L++ +  +    EA+SVF  M+      +L T N +ID  G+ G+  K   ++F 
Sbjct: 115 VSYTTLLTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMA-KEADKLFW 173

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M + G++P+ +++N+LL V     L+  A +LF  M  + I+Q++ TYN+++    K  
Sbjct: 174 GMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL 233

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           + + A  ++ EM  + I PN +TYST+I  + K G+LD A  +F +++  G+ +D+V Y 
Sbjct: 234 EHEKANNLIQEMQNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQ 293

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T++  Y + G    A  +  E++    R D +  +  +      G+ +E   +F Q    
Sbjct: 294 TMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAAAGRLEEATWVFRQAIDA 349

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
               ++  +  LI ++SK   Y   +++F + ++     D  + + +++A  K    E A
Sbjct: 350 GEVKDITVFERLIHLFSKYKKYSNVVEVFDKMRERRYFPDSNVIALVLNAYGKLHEFEKA 409

Query: 529 VSLLDEMTKEG 539
            S+  EM  EG
Sbjct: 410 NSVYMEMQDEG 420



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 169/349 (48%), Gaps = 31/349 (8%)

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
           R +  D +TY+TL+    K    D A   + +M    +  ++V YS +I+   K      
Sbjct: 3   RALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
           A+++FS +K  G   D V+YN++++++ K   F EA  +  EM ++G+  D V+Y  LL 
Sbjct: 63  AISIFSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLT 122

Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
            + +  ++ E   +F +M+      +L T + +IDVY + G+ KEA ++F   ++ G++ 
Sbjct: 123 MHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEP 182

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
           +VV Y+ L+       L   A+ L   M ++ I  NVVTYNS++  +G++          
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTL--------- 233

Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
                 + E AN + +    ++ ++    T + II ++ ++       GK +   R  +L
Sbjct: 234 ------EHEKAN-NLIQEMQNRGIEPNSITYSTIISIWVKV-------GKLD---RAAML 276

Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
                FQK+    ++ + V +  ++ A  R      A  LL EL+  DN
Sbjct: 277 -----FQKLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320


>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Brachypodium distachyon]
          Length = 410

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 184/353 (52%), Gaps = 4/353 (1%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V A +AL+  Y RSG   EA  VF+ M R  L PN VT+ A+I      G   K +  +F
Sbjct: 38  VAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLA-LF 96

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           + M   G++P+  T+N L+    R G +E AR LF EM  +GI +++ +YNTL+  +C+ 
Sbjct: 97  EKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRY 156

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +M  A +++  M  + I P+VVT++ ++DGY KAG++ +AL+  ++M+  G     V+Y
Sbjct: 157 RKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTY 216

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N +++ + +      A     +M+  G+    VTY  L+  + ++   D+   MF  M+ 
Sbjct: 217 NALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEK 276

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             +  ++ TY  L+      G  K+A ++F+   + GL+   V+Y  LI    + G    
Sbjct: 277 AGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYK 336

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVERDLGKQKES 577
           A+ L+ EM K+G  PN  +Y   I      G+ +  E  +DD+ R   +  ES
Sbjct: 337 AMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSES 389



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 118/224 (52%)

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D+     L+   C+   +  A  +   MP   ++PN VT++ +I GY   GR +  L +F
Sbjct: 37  DVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALF 96

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            +M+  GI  +  +YN ++  + + G FE A L+ +EM + GI ++ V+YN L+ G  + 
Sbjct: 97  EKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRY 156

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
            K  +  ++ E M+ + + P+++T++ L+D Y K G    A+    + + AG +   V Y
Sbjct: 157 RKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTY 216

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           +ALI   C+   +  A     +M + G+ P  VTY  +IDAF R
Sbjct: 217 NALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFAR 260



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 110/259 (42%), Gaps = 35/259 (13%)

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           KA   + ++   + L+  Y + G   EA ++F    + GL  + V ++ALI     +G  
Sbjct: 30  KAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRR 89

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           E  ++L ++M   GI PN+ TYN ++  +       C   + ER        A L     
Sbjct: 90  EKGLALFEKMRIGGIEPNLYTYNILVGEW-------CRTGEFER--------ARLLF--- 131

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKIKPN 644
              +++   G T N +   +  L+A           CR +++     + + M +  I+P+
Sbjct: 132 ---EEMPAKGITRNVV--SYNTLIA---------GLCRYRKMKDATQLLELMRREGIRPS 177

Query: 645 VVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH-GLLMGY-RDNIWVQALSLFD 702
           VVTF+ +++   +     +A     ++R+   Q   V +  L+ G+ R    ++A   F 
Sbjct: 178 VVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFS 237

Query: 703 EVKLMDSSTASAFYNALTD 721
           ++K    +     Y  L D
Sbjct: 238 DMKERGLAPTKVTYTILID 256


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 140/548 (25%), Positives = 248/548 (45%), Gaps = 57/548 (10%)

Query: 41  PHWTSHKVSLTKPPLSPSPRNAPKPAATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRR 100
           P ++ H+       L+P   +  KPA  S        PF   S LP S S   PD     
Sbjct: 2   PKFSIHQ-------LNPLTISLHKPARLS--------PFFYFSSLPLS-SNSTPDAQNEL 45

Query: 101 STR---FVSKMHFGRPKIAMSTRHSVVAEEA-------LHHVT-AFARDDVSLGDILKKF 149
           S     F S+  FG  K+  +T + ++   A       +H V     R+   L + +   
Sbjct: 46  SISPQIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFIL 105

Query: 150 EFKLCG-----ADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILG 204
            FK CG      +   F  R + N     + ++ F   +    ++ D        + + G
Sbjct: 106 IFKACGKAHLPGEAVNFFHR-MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFG 164

Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
                         A ++G+   +  ++ +I A  + G    A+  F  M   N  P++ 
Sbjct: 165 --------------ANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVF 210

Query: 265 TYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           TY+ +++  C +  VD    V + D+M   G  P+ +TFN L+   S+ G    A  L +
Sbjct: 211 TYSTLMNGLCKERRVD--EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVD 268

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
            M  +G   +  TYNTL+  +C   ++D A  ++ +M +    PN VTY T+I+G  K  
Sbjct: 269 NMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQR 328

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           R +D +++   M+  G   +   Y++++S   K G+ E A+ + KEM   G + + V Y 
Sbjct: 329 RAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYG 388

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           A + G  +  K DE   + ++M +    PN  TYS+L+  + K G  ++A+ +++E    
Sbjct: 389 AFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQ 448

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
            ++ +VV  S L++ LC++G +  A+++   M  EG++P+VV Y+S+I          C 
Sbjct: 449 DMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGL-------CD 501

Query: 564 VDDVERDL 571
           V  V++ L
Sbjct: 502 VGSVDKGL 509



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 229/463 (49%), Gaps = 17/463 (3%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR-YNLKPNLVTYNAVIDACGKGGVDF 280
           EG   T   F  +  A G++    EA++ F+ M    + K  + ++N+V++   + G DF
Sbjct: 94  EGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEG-DF 152

Query: 281 KHVVEIFDDML---RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
            +  + +  +      G QP+ +T+N ++    + G  + A + F EM  +  + D+FTY
Sbjct: 153 SYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTY 212

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           +TL++ +CK  ++D A  ++ EM A+   PN VT++ +ID  +K G L  A  +   M  
Sbjct: 213 STLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFL 272

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   + V+YNT++      G+ ++AL + ++M SS    + VTY  ++ G  KQ + ++
Sbjct: 273 KGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAED 332

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +   M+      N   YS+LI    K G  + A+++++E  + G K +VV+Y A ID
Sbjct: 333 GVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFID 392

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            LC++   + A  +L EM  +G  PN  TY+S++  F +   ++  +  V +++  Q   
Sbjct: 393 GLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAIL-VWKEMMSQDMR 451

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
            N+   CS     + E+GR   + + V+  ++ E             + LC +G   K  
Sbjct: 452 HNV-VCCSVLLNGLCESGRL-REALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGL 509

Query: 638 KL---------KIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           KL         K +P+VVT++ + NA  R ++   A  LL  +
Sbjct: 510 KLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 552



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 91/407 (22%), Positives = 158/407 (38%), Gaps = 37/407 (9%)

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           T+  +I+ YA +        +   MK  G  L    +  +     K     EA+     M
Sbjct: 67  TFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRM 126

Query: 431 ESSGIRKDAV-TYNALLGGYGKQGKYDEVRRMFEQM---KADCVSPNLLTYSTLIDVYSK 486
            +    K  V ++N++L    ++G +    + +  +    +    PNLLTY+ +I    K
Sbjct: 127 ANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCK 186

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G    A+  FRE        DV  YS L++ LCK   V+ AV LLDEM  EG  PN VT
Sbjct: 187 LGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVT 246

Query: 547 YNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFG 606
           +N +IDA  ++            DL +  +  +          ++   G   N++   + 
Sbjct: 247 FNVLIDALSKNG-----------DLSRAAKLVD----------NMFLKGCVPNEV--TYN 283

Query: 607 QLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
            L+     +GK +          L + +KM   K  PN VT+  I+N   +    ED   
Sbjct: 284 TLIHGLCLKGKLDK--------ALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVH 335

Query: 667 LLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLW 724
           +L  +     +     +  L+   +++     A+ L+ E+           Y A  D L 
Sbjct: 336 ILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLC 395

Query: 725 HFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAW 771
              +   A+ ++ E   +    N ++ S L       G ++  +  W
Sbjct: 396 RDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVW 442



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 121/282 (42%), Gaps = 45/282 (15%)

Query: 151 FKLCGADDYTFLLRELGNRGEWSKAIQCFAF--AVKREERKNDQGKLASAMIS------- 201
           FK   +++   L +E+  +G     +   AF   + R+E+ ++   +   M+S       
Sbjct: 360 FKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNA 419

Query: 202 ------ILGRLGKVDLAKNI--FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
                 + G   K D  K I  ++  +++   + V   S L++    SG  +EA++V+  
Sbjct: 420 FTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTH 479

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDML--RNGVQPDRITFNSLL-AVC 309
           M    LKP++V Y+++I   C  G VD    +++F +M       +PD +T+N L  A+C
Sbjct: 480 MLGEGLKPDVVAYSSMIKGLCDVGSVD--KGLKLFYEMQCQEPKSRPDVVTYNILFNALC 537

Query: 310 SRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA---------------------ICKGA 348
            +  L  A  +L N M+  G D D  T N  L+                      + K  
Sbjct: 538 RQDNLTRAI-DLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRE 596

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
           +   A  I+ EM  + + P   T+S +I    K  R+ + ++
Sbjct: 597 RKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETID 638


>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
 gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
          Length = 877

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 186/362 (51%), Gaps = 3/362 (0%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I++  ++GKV  A  + +   + G  + +  +S LI+ + +      A +VF  + +  
Sbjct: 454 LINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDG 513

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           LKP++V YN +I A CG G +D    + +  +M +   +P   TF  ++   +R G    
Sbjct: 514 LKPDVVLYNNIIKAFCGMGNMD--RAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRR 571

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A  +F+ M   G    + T+N L+  + +  QM+ A EI+ EM    +SP+  TY+T+++
Sbjct: 572 ALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMN 631

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GYA  G    A   F++++  G+ LD  +Y  +L    K GR + AL V +EM +  I +
Sbjct: 632 GYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPR 691

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           +   YN L+ G+ ++G   E   + +QMK + V P++ TY++ I+   K G    A +  
Sbjct: 692 NTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTI 751

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           +E +  G+K +V  Y+ LI       L E A+   +EM   G++P+   Y+ ++ +    
Sbjct: 752 QEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSR 811

Query: 558 AT 559
           AT
Sbjct: 812 AT 813



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 178/348 (51%), Gaps = 3/348 (0%)

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           +F+     G+  +V ++  LI+ Y + G   +A+ V   M+   +K N+ TY+ +I+   
Sbjct: 435 VFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFL 494

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQD 333
           K   D+ +   +F+D++++G++PD + +N+++ A C  G + + A ++  EM  +     
Sbjct: 495 KLK-DWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNM-DRAIHMVKEMQKKRHRPT 552

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
             T+  ++    +  +M  A EI   M      P V T++ ++ G  +  +++ A+ +  
Sbjct: 553 SRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILD 612

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           EM   G+  D  +Y T+++ YA LG   +A     ++ + G+  D  TY ALL    K G
Sbjct: 613 EMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSG 672

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           +      +  +M A  +  N   Y+ LID +++ G   EA  + ++ KQ G++ D+  Y+
Sbjct: 673 RMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYT 732

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + I+A CK G +  A   + EM   G++PNV TY ++I  +  ++  E
Sbjct: 733 SFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPE 780



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 123/515 (23%), Positives = 222/515 (43%), Gaps = 71/515 (13%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           M+    R G +  A+  FE+    G   + + +++LI AY      +EA+S    MK   
Sbjct: 308 MVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMKEEG 367

Query: 259 LKPNLVTYNAVIDACGKGG--------------------------VDFKHVVE------- 285
           ++ +LVTY+ V+    K G                          +D  H +        
Sbjct: 368 VEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIG 427

Query: 286 -------IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                  +F  +   G  P  I++  L+ + ++ G    A  +   M   GI  ++ TY+
Sbjct: 428 NEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYS 487

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            L++   K      AF +  ++    + P+VV Y+ +I  +   G +D A++M  EM+  
Sbjct: 488 MLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKK 547

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
                  ++  ++  +A+ G    AL +   M  SG      T+NAL+ G  ++ + ++ 
Sbjct: 548 RHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKA 607

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             + ++M    VSP+  TY+T+++ Y+  G   +A + F + +  GL+ DV  Y AL+ A
Sbjct: 608 VEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKA 667

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
            CK+G ++SA+++  EM+ + I  N   YN +ID + R               G   E+A
Sbjct: 668 CCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARR--------------GDVWEAA 713

Query: 579 NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
           +L  M     + VQ    T    I         KAG          ++L      Q+M  
Sbjct: 714 DL--MQQMKQEGVQPDIHTYTSFIN-----ACCKAG----------DMLRATKTIQEMEA 756

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
           L +KPNV T++ +++  +  +  E A    EE++L
Sbjct: 757 LGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKL 791



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 212/474 (44%), Gaps = 43/474 (9%)

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           +++ VV  F+ + +    P R  F  ++   +R G    AR  F  M  RGI      Y 
Sbjct: 286 NWQAVVSAFERIKK----PARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYT 341

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM------F 392
           +L+ A   G  M+ A   + +M  + +  ++VTYS ++ G+AK G  D + NM       
Sbjct: 342 SLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLV 401

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
            EM+  GI      Y+T+++ Y  +G  E+ L+V K ++  G     ++Y  L+  Y K 
Sbjct: 402 REMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKM 461

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           GK  +   + + M++  +  N+ TYS LI+ + K   +  A  +F +  + GLK DVVLY
Sbjct: 462 GKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLY 521

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERD 570
           + +I A C  G ++ A+ ++ EM K+  RP   T+  II  F R+      ++  D+ R 
Sbjct: 522 NNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRR 581

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL--- 627
            G        +A+           G  + + ++   +++ E A  G   +      +   
Sbjct: 582 SGCIPTVHTFNALV---------LGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNG 632

Query: 628 -CILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVY 679
              LG        F K+    ++ +V T+ A+L AC +    + A  +  E+   +    
Sbjct: 633 YAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRN 692

Query: 680 GVAHGLLM---GYRDNIWVQALSLFDEVKLM----DSSTASAFYNALT---DML 723
              + +L+     R ++W +A  L  ++K      D  T ++F NA     DML
Sbjct: 693 TFVYNILIDGWARRGDVW-EAADLMQQMKQEGVQPDIHTYTSFINACCKAGDML 745



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/521 (21%), Positives = 227/521 (43%), Gaps = 45/521 (8%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           F  ++  Y R G    A   F SM+   + P+   Y ++I A   G  D +  +     M
Sbjct: 305 FGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGR-DMEEALSCVRKM 363

Query: 291 LRNGVQPDRITFNSLLAVCSRGGL------WEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
              GV+   +T++ ++   ++ G        + A +L  EM   GID  I  Y+T+++  
Sbjct: 364 KEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGY 423

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
                 +    +   +     +P+V++Y  +I+ Y K G++  AL +   M+  GI  + 
Sbjct: 424 TMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNM 483

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
            +Y+ +++ + KL  +  A  V +++   G++ D V YN ++  +   G  D    M ++
Sbjct: 484 KTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKE 543

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M+     P   T+  +I  +++ G  + A++IF   +++G    V  ++AL+  L +   
Sbjct: 544 MQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQ 603

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESANLDA 582
           +E AV +LDEM   G+ P+  TY +I++ +     T    +     R+ G + +    +A
Sbjct: 604 MEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEA 663

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC-----------ILG 631
           +     K   ++GR  + +      +  E + Q    N     IL               
Sbjct: 664 LL----KACCKSGRMQSAL-----AVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAAD 714

Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL---------RLFDNQVYGVA 682
           + Q+M +  ++P++ T+++ +NAC +      A+  ++E+         + +   ++G A
Sbjct: 715 LMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWA 774

Query: 683 HGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
              L         +AL  F+E+KL       A Y+ L   L
Sbjct: 775 CASLPE-------KALRCFEEMKLAGLKPDKAVYHCLMTSL 808



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 134/325 (41%), Gaps = 46/325 (14%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  +++     G   +AI       K+  R   +  +   +I    R G++  A  IF+ 
Sbjct: 521 YNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMP--IIHGFARAGEMRRALEIFDM 578

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G   TV+ F+AL+         ++A+ + + M    + P+  TY  +++     G 
Sbjct: 579 MRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALG- 637

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCS---------------------------- 310
           D     E F  +   G++ D  T+ +LL  C                             
Sbjct: 638 DTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYN 697

Query: 311 --------RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
                   RG +WEAA +L  +M   G+  DI TY + ++A CK   M  A + + EM A
Sbjct: 698 ILIDGWARRGDVWEAA-DLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEA 756

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
             + PNV TY+T+I G+A A   + AL  F EMK  G+  D+  Y+ +++         E
Sbjct: 757 LGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSRATVAE 816

Query: 423 A------LLVCKEMESSGIRKDAVT 441
           A      L +C+EM  S +  D  T
Sbjct: 817 AYIYSGILSICREMIESELTVDMGT 841


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 192/398 (48%), Gaps = 44/398 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK- 255
           +++++ L R G  +    + E  +       V  F  LI+   +     +A+ V   M  
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSG 368

Query: 256 -------RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAV 308
                    +++P++V YN +ID   K G   + +  +     + G  PD IT+N L+  
Sbjct: 369 GKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDG 428

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPN 368
             + G  E  + LF+EM   G+  ++ T NTL+  +C+  ++  A     E   + +  +
Sbjct: 429 FCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGD 488

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCK 428
            VTY+ +I+ +      + A+ +F+EM   G   D + Y T++S +++ GR  +A  V  
Sbjct: 489 AVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLA 548

Query: 429 EMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
           E++  GIR D V YN L+GG+ +  K+  V  M ++M+   + P+ +TY+TLI   SK G
Sbjct: 549 ELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNG 608

Query: 489 LYK-----------------------------------EAMQIFREFKQAG-LKADVVLY 512
             K                                   EAM+IF++ K A  +  + V+Y
Sbjct: 609 DLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIY 668

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
           + LI++LCKN  V+SAVSL+++M   G+ PN  TYN+I
Sbjct: 669 NILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAI 706



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 166/356 (46%), Gaps = 38/356 (10%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMK-RYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
           V  ++ LI    + G  QE + +   M+ +    P+ +TYN +ID   K G + +   E+
Sbjct: 383 VVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAG-EIEKGKEL 441

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
           FD+M + GV P+ +T N+L+    R G   +A N F E   RG+  D  TY  L++A C 
Sbjct: 442 FDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCN 501

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
               + A E+  EM     SP+ + Y T+I G+++AGR+ DA  + +E+K LGI  D V 
Sbjct: 502 VNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVC 561

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN----------------------- 443
           YNT++  + +  +F     + KEME +G++ D +TYN                       
Sbjct: 562 YNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMI 621

Query: 444 ------------ALLGGYGKQGKYDEVRRMFEQMKADC-VSPNLLTYSTLIDVYSKGGLY 490
                       A++  Y   G  +E   +F+ MKA   V PN + Y+ LI+   K    
Sbjct: 622 KAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKV 681

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
           K A+ +  + K  G+  +   Y+A+   L     +E     +D M +    P+ +T
Sbjct: 682 KSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYIT 737



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 133/529 (25%), Positives = 244/529 (46%), Gaps = 51/529 (9%)

Query: 229 YAFSALISAYGRSGYCQEAISV----FNSMKRYNLKPNLVTYNAVIDACGKGG-----VD 279
           Y  +  +S   RSG  ++A+ V    F S    N +PN  T + +     K       + 
Sbjct: 191 YLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLS 250

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
              +V +      +GV         L+    R        +LF EM+  G   +    N+
Sbjct: 251 EDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNS 310

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK--- 396
           LL  + +    +   E+M +M   +I PNVVT+  +I+   K  R+DDAL +  +M    
Sbjct: 311 LLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGK 370

Query: 397 -----FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS-GIRKDAVTYNALLGGYG 450
                 + +  D V YNT++    K+GR +E L + + M S  G   D +TYN L+ G+ 
Sbjct: 371 ESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFC 430

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
           K G+ ++ + +F++M  + V+PN++T +TL+    + G    A+  F E ++ G+K D V
Sbjct: 431 KAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAV 490

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDV 567
            Y+ALI+A C     E A+ L +EM K G  P+ + Y ++I  F   GR A     + ++
Sbjct: 491 TYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL 550

Query: 568 ERDLGKQKESANLDAM----CSQDD--------KDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
           ++ LG + ++   + +    C  +         K+++EAG   + I   +  L+A  +  
Sbjct: 551 KK-LGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTI--TYNTLIAYASKN 607

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF- 674
           G        ++     V +KM K  + P V T+ A++NA     +  +A  + ++++   
Sbjct: 608 G--------DLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAAS 659

Query: 675 ----DNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
               +  +Y +    L   ++N    A+SL +++K+   +  +  YNA+
Sbjct: 660 KVPPNTVIYNILINSLC--KNNKVKSAVSLMEDMKIWGVTPNTTTYNAI 706



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 147/329 (44%), Gaps = 39/329 (11%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    + G+++  K +F+    EG    V   + L+    R+G    A++ F   +R
Sbjct: 423 NCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQR 482

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             +K + VTY A+I+A C     +F+  +E+F++ML++G  PD I + +L++  S+ G  
Sbjct: 483 RGMKGDAVTYTALINAFCNVN--NFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRM 540

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A  +  E+   GI  D   YNTL+   C+  +    FE++ EM    + P+ +TY+T+
Sbjct: 541 ADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTL 600

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS-- 433
           I   +K G L  A  +  +M   G+     +Y  V++ Y   G   EA+ + K+M+++  
Sbjct: 601 IAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASK 660

Query: 434 ----------------------------------GIRKDAVTYNALLGGYGKQGKYDEVR 459
                                             G+  +  TYNA+  G   +   ++V 
Sbjct: 661 VPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVF 720

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
              ++M     +P+ +T   L +  S  G
Sbjct: 721 EFMDRMIEHACNPDYITMEILTEWLSAVG 749



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 119/243 (48%), Gaps = 4/243 (1%)

Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
           G  S A+  F  A +R  + +      +A+I+    +   + A  +F   L  G      
Sbjct: 468 GRVSSAVNFFVEAQRRGMKGD--AVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAI 525

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
            +  LIS + ++G   +A  V   +K+  ++P+ V YN +I    +    F  V E+  +
Sbjct: 526 VYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTN-KFHRVFEMLKE 584

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M   G++PD IT+N+L+A  S+ G  + A+ +  +M+  G+   + TY  +++A C    
Sbjct: 585 MEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGN 644

Query: 350 MDLAFEIMAEMPAKN-ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            + A EI  +M A + + PN V Y+ +I+   K  ++  A+++  +MK  G+  +  +YN
Sbjct: 645 GNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYN 704

Query: 409 TVL 411
            + 
Sbjct: 705 AIF 707


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 120/516 (23%), Positives = 254/516 (49%), Gaps = 38/516 (7%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           Y  ++R+ G +G+  +A+  F    +R +  + +  + S  A+++IL   G    A  ++
Sbjct: 79  YIGIMRDYGRKGKVQEAVNVF----ERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVY 134

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
               + G    VY  +  + ++  +G    A+ + N+M     + N V+Y AVI    K 
Sbjct: 135 MRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKE 194

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
               +    +FD+ML+ G+ PD +TFN L+ V  + G  + +  LF++++ RG+  ++FT
Sbjct: 195 NCQIE-AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFT 253

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           +N  +  +C+   +D A  ++  + ++ ++P+V++Y+T+I G+ K  +L +A     +M 
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMV 313

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  +  +YNT+++ + K G  + A  + ++    G   D  TY++L+ G    G  +
Sbjct: 314 NSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMN 373

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
               +F +        +++ Y+TL+   SK GL  +A+Q+ ++  + G   D+  Y+ ++
Sbjct: 374 RAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVV 433

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
           + LCK G +  A  +L++   +G  P++ T+N++ID + +           +R++ K  E
Sbjct: 434 NGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCK-----------QRNMDKAIE 482

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
              LD M S         G T + I   +  L+       K +N        ++  F+ M
Sbjct: 483 I--LDTMLSH--------GITPDVI--TYNTLLNGLCKARKLDN--------VVDTFKAM 522

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            +    PN++T++ ++ +  +     +A  L +E++
Sbjct: 523 LEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMK 558



 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 198/403 (49%), Gaps = 10/403 (2%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILG--RLGKVDLA 212
           D  TF  L+  L  +G   ++ + F+  +KR    N    L +  I I G  R G +D A
Sbjct: 215 DILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPN----LFTFNIFIQGLCRKGAIDEA 270

Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
             + E+ ++EG    V +++ LI  + +     EA    + M    ++PN  TYN +I+ 
Sbjct: 271 ARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIING 330

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
             K G+  ++  +I  D +  G  PD  T++SL+      G    A  +F E + +G   
Sbjct: 331 FCKAGM-MQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKH 389

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
            I  YNTL+  + K   +  A ++M +M     SP++ TY+ +++G  K G L DA  + 
Sbjct: 390 SIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGIL 449

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           ++    G   D  ++NT++  Y K    ++A+ +   M S GI  D +TYN LL G  K 
Sbjct: 450 NDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKA 509

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
            K D V   F+ M     +PN++TY+ LI+ + K     EAM++F+E K  GL  D+V  
Sbjct: 510 RKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTL 569

Query: 513 SALIDALCKNGLVESAVSLLDEMTKE-GIRPNVVTYNSIIDAF 554
             LI  LC NG ++ A  L   + KE     +   +N +I+AF
Sbjct: 570 CTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAF 612



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 181/393 (46%), Gaps = 39/393 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+   + G +  A  I   A+ +G+    + +S+LI+     G    A++VF     
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              K +++ YN ++    K G+  +  +++  DM+ +G  PD  T+N ++    + G   
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQ-ALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  + N+ + +G   DIFT+NTL+D  CK   MD A EI+  M +  I+P+V+TY+T++
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G  KA +LD+ ++ F  M   G   + ++YN ++  + K  +  EA+ + KEM++ G+ 
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563

Query: 437 KDAVTYNALLGGYGKQGKYDEV------------------------------------RR 460
            D VT   L+ G    G+ D+                                      +
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEK 623

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F +M     +P+  TY  +ID Y K G    A     E    GL         +++ LC
Sbjct: 624 LFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLC 683

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
               +  AV +++ M + GI P  V  NSI +A
Sbjct: 684 VTHRLSEAVVIINLMVQNGIVPEEV--NSIFEA 714



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 109/275 (39%), Gaps = 69/275 (25%)

Query: 434 GIRKDAVTYNALLGGYGKQGKYD-------EVRR-------------------------- 460
           G +    TY  ++   G  GK++       E+R+                          
Sbjct: 35  GFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQE 94

Query: 461 ---MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +FE+M      P++ +Y+ ++++  + G + +A +++   K  G+  DV  ++  + 
Sbjct: 95  AVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMK 154

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
           + C  G   +A+ LL+ M  +G   N V+Y ++I  F +                 Q E+
Sbjct: 155 SFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC--------------QIEA 200

Query: 578 ANL-DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
            +L D M  Q    +     T N++I V            KK N    E L     F K+
Sbjct: 201 YHLFDEMLKQ---GICPDILTFNKLIHVL----------CKKGNVQESEKL-----FSKV 242

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            K  + PN+ TF+  +    R  + ++A+ LLE +
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI 277



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 120/279 (43%), Gaps = 19/279 (6%)

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
           T++G +  + TY  +I+  G     E  ++DV  ++ K  +S  L+ +     +D    G
Sbjct: 32  TEDGFKHTLETYKCMIEKLGLHGKFE-AMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKG 90

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK-PNVVTFSAILNA 654
           +   + + VF ++         +       IL   G F + HK+ ++  ++  +  +   
Sbjct: 91  KV-QEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTH 149

Query: 655 CSRCNSFEDASMLLEELRLFDN------QVYGVAHGLLMG--YRDNIWVQALSLFDEVKL 706
             R  SF         LRL +N      +   V++  ++   Y++N  ++A  LFDE+  
Sbjct: 150 TIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLK 209

Query: 707 MDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARA 766
                    +N L  +L   G  + ++ +  +  +R V  N+++ +     L   GA   
Sbjct: 210 QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDE 269

Query: 767 MVHAWLLNIHSIVFEGHELPKLLS---ILTGWGKHSKVV 802
              A LL   SIV EG   P ++S   ++ G+ KHSK+V
Sbjct: 270 A--ARLL--ESIVSEGLT-PDVISYNTLICGFCKHSKLV 303


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 180/334 (53%), Gaps = 1/334 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G+   V  ++ LI    + G  ++A  +F  M ++ L  N  TY  +I    K G+  K 
Sbjct: 193 GFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIK-KQ 251

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             E+++ M  +GV P+  T+N ++    + G  + A  LF+EM  RG+  +I TYNTL+ 
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIG 311

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            +C+  + + A ++M +M +  I+PN++TY+T+IDG+   G+L  AL++  ++K  G+  
Sbjct: 312 GLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
             V+YN ++S + K G    A  V KEME  GI+   +TY  L+  + +    ++  ++ 
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLR 431

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
             M+   ++P++ TYS LI  +   G   EA ++F+      L+ + V+Y+ ++   CK 
Sbjct: 432 SPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKE 491

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           G    A+ L  EM ++ + PNV +Y  +I+   +
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCK 525



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 183/333 (54%), Gaps = 1/333 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           VY+F  +I     +G  +++  +   ++ +   PN+V Y  +ID C K G + +   ++F
Sbjct: 163 VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRG-EIEKAKDLF 221

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            +M + G+  +  T+  L+    + G+ +    ++ +M   G+  +++TYN +++  CK 
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKD 281

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +   AF++  EM  + +S N+VTY+T+I G  +  + ++A  +  +MK  GI  + ++Y
Sbjct: 282 GRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITY 341

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           NT++  +  +G+  +AL +C++++S G+    VTYN L+ G+ K+G      ++ ++M+ 
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + P+ +TY+ LID +++    ++A+Q+    ++ GL  DV  YS LI   C  G +  
Sbjct: 402 RGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNE 461

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           A  L   M  + + PN V YN+++  + +  ++
Sbjct: 462 ASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSS 494



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 194/363 (53%), Gaps = 5/363 (1%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I    + G+++ AK++F      G     + ++ LI    ++G  ++   ++  M
Sbjct: 200 IYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM 259

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           +   + PNL TYN V++   K G   K   ++FD+M   GV  + +T+N+L+    R   
Sbjct: 260 QEDGVFPNLYTYNCVMNQHCKDGRT-KDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMK 318

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A  + ++M   GI+ ++ TYNTL+D  C   ++  A  +  ++ ++ +SP++VTY+ 
Sbjct: 319 ANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++ G+ K G    A  +  EM+  GI   +++Y  ++  +A++   E+A+ +   ME  G
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELG 438

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  D  TY+ L+ G+  +G+ +E  R+F+ M A  + PN + Y+T++  Y K G    A+
Sbjct: 439 LTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRAL 498

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++FRE ++  L  +V  Y  +I+ LCK    + A  L+++M   GI P+    +SI++  
Sbjct: 499 RLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPS----DSILNLI 554

Query: 555 GRS 557
            R+
Sbjct: 555 SRA 557



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 168/331 (50%), Gaps = 2/331 (0%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +  +I+AY +S     +IS FN M      P    +N ++     G   F      F++ 
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFV-VGSSSFNQWWRFFNES 155

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
            +  V  D  +F  ++  C   G  E + +L  E+   G   ++  Y TL+D  CK  ++
Sbjct: 156 -KIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEI 214

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           + A ++  EM    +  N  TY+ +I G  K G       M+ +M+  G+  +  +YN V
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           ++ + K GR ++A  +  EM   G+  + VTYN L+GG  ++ K +E  ++ +QMK+D +
Sbjct: 275 MNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGI 334

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           +PNL+TY+TLID +   G   +A+ + R+ K  GL   +V Y+ L+   CK G    A  
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           ++ EM + GI+P+ +TY  +ID F R    E
Sbjct: 395 VVKEMEERGIKPSKITYTILIDTFARMDNME 425



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/346 (21%), Positives = 150/346 (43%), Gaps = 53/346 (15%)

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
           G L+  A++L  +++   I    FT ++LL  + +    +    +               
Sbjct: 52  GNLYSHAQSLLLQVISGKIQSQFFTSSSLLHYVTESETSETKSRL--------------- 96

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y  MI+ Y ++  LD +++ F+EM   G       +N +L+       F +      E +
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
              +  D  ++  ++ G  + G+ ++   +  +++    SPN++ Y+TLID   K G  +
Sbjct: 157 IK-VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +A  +F E  + GL A+   Y+ LI  L KNG+ +    + ++M ++G+ PN+ TYN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII--KVFGQLV 609
           +   +   T+                   DA    D+  ++E G + N +    + G L 
Sbjct: 276 NQHCKDGRTK-------------------DAFKLFDE--MRERGVSCNIVTYNTLIGGLC 314

Query: 610 AE-KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
            E KA +  K             V  +M    I PN++T++ +++ 
Sbjct: 315 REMKANEANK-------------VMDQMKSDGINPNLITYNTLIDG 347


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 185/356 (51%), Gaps = 3/356 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+IS   ++ +++ A  +       G+   +  ++ +I +         A+ V + +  
Sbjct: 141 NAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLL 200

Query: 257 YNLKPNLVTYNAVIDAC-GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            N  P ++TY  +I+A   +GG++    +++ ++ML  G+ PD  T+N+++    + G+ 
Sbjct: 201 DNCMPTVITYTILIEATIVEGGIN--EAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 258

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  L   +  +G   D+ +YN LL A     + D   +++AEM ++   PN VTYS +
Sbjct: 259 ERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 318

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I    + GR+D+A+++   M    +  D  SY+ ++S   K GR + A+ +   M S+G 
Sbjct: 319 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 378

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D V YN +L    K G  ++   +F +++     PN+ +Y+T+I      G    A+ 
Sbjct: 379 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 438

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +       G+  D + Y++LI  LC++GLVE A+ LLD+M + G RP V++YN ++
Sbjct: 439 MVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 494



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 185/387 (47%), Gaps = 5/387 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           MI  L    K+ LA  + +  L +    TV  ++ LI A    G   EA+ +   M    
Sbjct: 178 MIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG 237

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           L P++ TYNA+I    K G+  +   E+   +   G +PD I++N LL      G W+  
Sbjct: 238 LLPDMYTYNAIIRGMCKEGM-VERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEG 296

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L  EM  RG + +  TY+ L+ ++C+  ++D A  ++  M  K ++P+  +Y  +I  
Sbjct: 297 EKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 356

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             K GRLD A+ +   M   G   D V+YNT+L+   K G   +AL +  ++   G   +
Sbjct: 357 LCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 416

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
             +YN ++      G       M   M +  V P+ +TY++LI    + GL +EA+ +  
Sbjct: 417 VSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLD 476

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG--- 555
           + +Q+G +  V+ Y+ ++  LCK   ++ A+ +  EM ++G RPN  TY  +I+  G   
Sbjct: 477 DMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG 536

Query: 556 -RSATTECTVDDVERDLGKQKESANLD 581
            R+   E       RD+  Q     L+
Sbjct: 537 WRTEAMELANSLFSRDVISQDSFKRLN 563



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 186/347 (53%), Gaps = 8/347 (2%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V+A++A+IS + +    + A  V N MK     P++VTYN +I + C +  +     +++
Sbjct: 137 VFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGL--ALKV 194

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
            D +L +   P  IT+  L+ A    GG+ EA + L  EM+ RG+  D++TYN ++  +C
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMK-LLEEMLARGLLPDMYTYNAIIRGMC 253

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K   ++ A E++  + +K   P+V++Y+ ++  +   G+ D+   + +EM   G   ++V
Sbjct: 254 KEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 313

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y+ ++S   + GR +EA+ V K M    +  D  +Y+ L+    K+G+ D    + + M
Sbjct: 314 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 373

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
            ++   P+++ Y+T++    K G   +A++IF + +  G   +V  Y+ +I AL   G  
Sbjct: 374 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 433

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV---DDVER 569
             A+ ++  M  +G+ P+ +TYNS+I    R    E  +   DD+E+
Sbjct: 434 SRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ 480



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 211/453 (46%), Gaps = 28/453 (6%)

Query: 234 LISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI--FDDML 291
           L++   ++G   E++     +      P+++    +I    KG  +FK++ +     ++L
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLI----KGFFNFKNIEKASRVMEIL 129

Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
            +  +PD   +N++++   +    EAA  + N M  RG   DI TYN ++ ++C   ++ 
Sbjct: 130 ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLG 189

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
           LA +++ ++   N  P V+TY+ +I+     G +++A+ +  EM   G+  D  +YN ++
Sbjct: 190 LALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 249

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
               K G  E A  +   + S G + D ++YN LL  +  QGK+DE  ++  +M +    
Sbjct: 250 RGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 309

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           PN +TYS LI    + G   EA+ + +   +  L  D   Y  LI ALCK G ++ A+ +
Sbjct: 310 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 369

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGR--SATTECTVDDVERDLGKQKESANLDAMCSQ--- 586
           +D M   G  P++V YN+I+ A  +  +A     + +  R +G     ++ + M S    
Sbjct: 370 MDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 429

Query: 587 -DDKDVQEAGRTDNQIIK-------VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
             D+  +  G     I K        +  L++     G  E          +G+   M +
Sbjct: 430 CGDRS-RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEA--------IGLLDDMEQ 480

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              +P V++++ +L    +    +DA  +  E+
Sbjct: 481 SGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEM 513



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 145/305 (47%), Gaps = 9/305 (2%)

Query: 143 GDILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMI 200
            +++     K C  D   Y  LLR   N+G+W +  +  A    R    N      S +I
Sbjct: 262 AELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT--YSILI 319

Query: 201 SILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
           S L R G++D A ++ +  + +      Y++  LISA  + G    AI + + M      
Sbjct: 320 SSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCL 379

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
           P++V YN ++ A  K G +    +EIF+ +   G  P+  ++N++++     G    A  
Sbjct: 380 PDIVNYNTILAALCKNG-NANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 438

Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
           +   M+ +G+D D  TYN+L+  +C+   ++ A  ++ +M      P V++Y+ ++ G  
Sbjct: 439 MVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 498

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K  R+DDA+ MF+EM   G   +  +Y  ++      G   EA+    E+ +S   +D +
Sbjct: 499 KVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAM----ELANSLFSRDVI 554

Query: 441 TYNAL 445
           + ++ 
Sbjct: 555 SQDSF 559



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 99/421 (23%), Positives = 180/421 (42%), Gaps = 86/421 (20%)

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY------AKAGRLDDALNMFS 393
           LL+  CK  + + +   +  +  K  +P+V+  + +I G+       KA R+ + L   +
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 133

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           E        D  +YN V+S + K+ R E A  V   M++ G   D VTYN ++G    + 
Sbjct: 134 EP-------DVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 186

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           K     ++ +Q+  D   P ++TY+ LI+     G   EAM++  E    GL  D+  Y+
Sbjct: 187 KLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 246

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           A+I  +CK G+VE A  L+  +T +G +P+V++YN ++ AF               + GK
Sbjct: 247 AIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAF--------------LNQGK 292

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL----CI 629
             E                              +LVAE   +G + N+    IL    C 
Sbjct: 293 WDEGE----------------------------KLVAEMFSRGCEPNKVTYSILISSLCR 324

Query: 630 LG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVA 682
            G       V + M + ++ P+  ++  +++A  +    + A  +++         Y ++
Sbjct: 325 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMD---------YMIS 375

Query: 683 HGLL---MGYRDNIWV--------QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRG 731
           +G L   + Y   +          QAL +F++++ M      + YN +   LW  G +  
Sbjct: 376 NGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSR 435

Query: 732 A 732
           A
Sbjct: 436 A 436


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 176/354 (49%), Gaps = 3/354 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G +  A    E  +  G    +  ++ LIS   R G   EA  +        L PN  +Y
Sbjct: 323 GHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSY 382

Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
             +I A C +GG D         +M   G +PD +T+ +L+      G  + A  +  +M
Sbjct: 383 TPLIHAYCKQGGYD--RASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKM 440

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
           + RG+  D   YN L+  +CK  ++  A  ++AEM  +++ P+   Y+T++DG+ + G L
Sbjct: 441 LERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNL 500

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D+A  +F      G+    V YN ++  Y K G  ++A+     M+   +  D  TY+ +
Sbjct: 501 DEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTV 560

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           + GY KQ   D  ++MF +M      PN++TY++LI+ + + G    +++IFRE +  GL
Sbjct: 561 IDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGL 620

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAT 559
             +VV YS LI + CK   +  A S  +EM      PN VT+N +++ F ++ T
Sbjct: 621 VPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGT 674



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 218/475 (45%), Gaps = 36/475 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           M+  L + GK++  + + E    +G    +  ++ LI  Y + G  + A  +F  +K   
Sbjct: 210 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 269

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             P + TY A+I+  C KG  DFK +  +  +M   G+  +   +N+++    + G    
Sbjct: 270 FLPTVETYGAIINGFCKKG--DFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVK 327

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           A      M+  G   DI TYNTL+   C+  ++  A +++ +   K + PN  +Y+ +I 
Sbjct: 328 AVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIH 387

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
            Y K G  D A N   EM   G   D V+Y  ++      G  + AL + ++M   G+  
Sbjct: 388 AYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFP 447

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           DA  YN L+ G  K+ K    + +  +M    V P+   Y+TL+D + + G   EA ++F
Sbjct: 448 DAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLF 507

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
               + G+   +V Y+A+I   CK G+++ A++ ++ M K  + P+  TY+++ID + + 
Sbjct: 508 ELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQ 567

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
              +     + R++ K K   N+                T   +I  F            
Sbjct: 568 HDLD-GAQKMFREMVKMKCKPNV---------------VTYTSLINGF------------ 599

Query: 618 KENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               CR+ ++   L +F++M    + PNVVT+S ++ +  +     DA+   EE+
Sbjct: 600 ----CRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEM 650



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 132/517 (25%), Positives = 224/517 (43%), Gaps = 80/517 (15%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +IS   R GKV  A  + E AL +G     ++++ LI AY + G    A +    M  
Sbjct: 348 NTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTE 407

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCS----- 310
              KP+LVTY A++      G +    + I + ML  GV PD   +N L++ +C      
Sbjct: 408 RGHKPDLVTYGALVHGLVVAG-EVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLP 466

Query: 311 -----------------------------RGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
                                        R G  + AR LF   + +G++  I  YN ++
Sbjct: 467 AAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMI 526

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
              CK   M  A   +  M  ++++P+  TYST+IDGY K   LD A  MF EM  +   
Sbjct: 527 KGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCK 586

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + V+Y ++++ + + G    +L + +EM++ G+  + VTY+ L+G + K+ K  +    
Sbjct: 587 PNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASF 646

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGL--YKEAMQIFREFKQA------------GLKA 507
           FE+M  +   PN +T++ L++ +SK G     E    F+E KQ+            G   
Sbjct: 647 FEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAP 706

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSA----TT 560
               Y++++  LC+ G+  +A+ L ++MT +G  P+ V++ +++      GRS       
Sbjct: 707 RSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIV 766

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT------------DNQIIKVFGQL 608
            C +++ E  +     S  LD    Q   +     +T            DN  +    QL
Sbjct: 767 SCNLNERELQIAVNYSSI-LDQYLPQGTSEASVILQTMFEECQSHSKVGDNIQVSFSNQL 825

Query: 609 VAE----------KAGQGKKENRCRQEILCILGVFQK 635
                        + G    E+ CR    CILG  Q+
Sbjct: 826 YLHDTKAGVTLLLRNGLDSSEDHCRYAEYCILGACQR 862



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 181/397 (45%), Gaps = 43/397 (10%)

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTV--YAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           +L R+  V+L    F+      Y   +  +A+S+L+    RS    E   V  +M+   +
Sbjct: 66  VLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEM 125

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQ-PDRITFNSLLAVCSRGGLWEAA 318
            P     + VI A    G+  +  +E++  +L+     PD I  NSLL +  + G  E A
Sbjct: 126 SPTREAMSIVIQAYSDSGL-VEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIA 184

Query: 319 RNLFNEM--VHRGIDQDIFTYNT--LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           R L++EM  +    D+ +  Y+T  ++  +CK  +++   +++ +   +   PN++ Y+T
Sbjct: 185 RKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNT 244

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGI---------------------GLDRV-------- 405
           +IDGY K G ++ A  +F E+K  G                       +DR+        
Sbjct: 245 LIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRG 304

Query: 406 ------SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
                  YNT++    K G   +A+   + M   G + D VTYN L+ G  + GK  E  
Sbjct: 305 LTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEAD 364

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++ EQ     + PN  +Y+ LI  Y K G Y  A     E  + G K D+V Y AL+  L
Sbjct: 365 QLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGL 424

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
              G V+ A+++ ++M + G+ P+   YN ++    +
Sbjct: 425 VVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCK 461



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 180/407 (44%), Gaps = 32/407 (7%)

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV--SYNTVLSI--YAKLGRFEE 422
           P+V+  +++++   K GR++ A  ++ EM  +    DR   +Y+T + +    K G+ EE
Sbjct: 163 PDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEE 222

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
              + ++    G   + + YN L+ GY K+G  +    +F ++K     P + TY  +I+
Sbjct: 223 GRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIIN 282

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
            + K G +K   ++  E    GL  +V +Y+ +IDA  K+G +  AV  ++ M + G +P
Sbjct: 283 GFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKP 342

Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQ------KESANLDAMCSQDDKD------ 590
           ++VTYN++I    R          +E+ LGK         +  + A C Q   D      
Sbjct: 343 DIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWL 402

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
           ++   R     +  +G LV      G        E+   L + +KM +  + P+   ++ 
Sbjct: 403 IEMTERGHKPDLVTYGALVHGLVVAG--------EVDVALTIREKMLERGVFPDAGIYNI 454

Query: 651 ILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVK 705
           +++   +      A +LL E+     L D  VY     L+ G+ R+    +A  LF+   
Sbjct: 455 LMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYAT---LVDGFIRNGNLDEARKLFELTI 511

Query: 706 LMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES 752
               +     YNA+      FG  + A   +   K+R +  + ++ S
Sbjct: 512 EKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYS 558


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 189/376 (50%), Gaps = 16/376 (4%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           +F+ +I A  + G+   AI VF  M      P+  TY  ++D  C +  +D    V + D
Sbjct: 189 SFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERID--EAVLLLD 246

Query: 289 DMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           +M   G  P  + +N L+  +C +G L    + L + M  +G   +  TYNTL+  +C  
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTK-LVDNMFLKGCFPNEVTYNTLIHGLCLK 305

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            ++D A  ++  M +    PN VTY T+I+G  K  R  D   +   M+  G  L++  Y
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIY 365

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           + ++S   K G+ EEA+ + K+M   G R + V Y+A++ G  ++GK +E + +   M +
Sbjct: 366 SVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMIS 425

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
               PN+ TYS+L+  + K GL +EA+Q++RE  + G   +   YS LID LC  G V+ 
Sbjct: 426 SGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKE 485

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------- 579
           A+ +  +M   GI+P+ V Y+S+I       + +  +      L +++  +         
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI 545

Query: 580 -LDAMCSQDDKDVQEA 594
            LD +C Q  KDV  A
Sbjct: 546 LLDGLCMQ--KDVSRA 559



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 201/443 (45%), Gaps = 43/443 (9%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKN--DQGKLASAMISILGRLGKVDLAKNIF 216
           +  +L  + N G + + ++ + + V      N    G   + +I  L +LG VD A  +F
Sbjct: 151 FNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVF 210

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
                +      Y +  L+    +     EA+ + + M+     P+ V YN +ID   K 
Sbjct: 211 RGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKK 270

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G D   V ++ D+M   G  P+ +T+N+L+  +C +G L + A +L   MV      +  
Sbjct: 271 G-DLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKL-DKAVSLLERMVSSKCIPNDV 328

Query: 336 TYNTLLDAICK------GAQMDLAFE-----------------------------IMAEM 360
           TY TL++ + K      GA++ ++ E                             +  +M
Sbjct: 329 TYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKM 388

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
             K   PN+V YS +IDG  + G+ ++A  + + M   G   +  +Y++++  + K G  
Sbjct: 389 AEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLS 448

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           EEA+ V +EM+ +G  ++   Y+ L+ G    G+  E   ++ +M    + P+ + YS++
Sbjct: 449 EEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSM 508

Query: 481 IDVYSKGGLYKEAMQIFREF---KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           I      G    A++++ E    ++   + DVV Y+ L+D LC    V  AV LL+ M  
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLD 568

Query: 538 EGIRPNVVTYNSIIDAFGRSATT 560
            G  P+V+T N+ ++     + +
Sbjct: 569 RGCDPDVITCNTFLNTLSEKSDS 591



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 150/341 (43%), Gaps = 35/341 (10%)

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           + I  + +S+N V+    KLG  + A+ V + M       D  TY  L+ G  K+ + DE
Sbjct: 181 MNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDE 240

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              + ++M+++  SP+ + Y+ LID   K G      ++       G   + V Y+ LI 
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIH 300

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            LC  G ++ AVSLL+ M      PN VTY ++I+                   G  K+ 
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLIN-------------------GLVKQR 341

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
             +D   ++    ++E G   NQ   ++  L++    +GK E          + +++KM 
Sbjct: 342 RAMDG--ARLLISMEERGYRLNQ--HIYSVLISGLFKEGKAEEA--------MTLWKKMA 389

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL---RLFDNQVYGVAHGLLMGYRDNIW 694
           +   +PN+V +SA+++   R     +A  +L  +       N VY  +  +   ++  + 
Sbjct: 390 EKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPN-VYTYSSLMKGFFKTGLS 448

Query: 695 VQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLV 735
            +A+ ++ E+     S     Y+ L D L   G+ + A +V
Sbjct: 449 EEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMV 489


>gi|255661196|gb|ACU25767.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
          Length = 426

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 219/444 (49%), Gaps = 36/444 (8%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y +S LI+ +G+ G   +A+S    M+   ++ +L  Y+ +I+   K   D+   + IF 
Sbjct: 10  YTYSTLITHFGKEGLFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKL-CDYSKAISIFS 68

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            + R+G+ PD + +NS++ V  +  L+  AR+L  EM   G+  D  +Y TLL    +  
Sbjct: 69  RLKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTLLTMYVENK 128

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +   A  + AEM       ++ T + MID Y + G   +A  +F  M+ LG+  + VSYN
Sbjct: 129 KFIEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPNVVSYN 188

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+L +Y+    F EA  + + M+   I ++ VTYN+++  YGK  ++++   + ++M++ 
Sbjct: 189 TLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSR 248

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + PN +TYST+I ++ K G    A  +F + + +G++ D VLY  +I A  + GLV  A
Sbjct: 249 GIEPNAITYSTIISIWGKVGKLDRAAMLFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHA 308

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
             LL E+      P+ +  ++ I     S              G+ +E+  +        
Sbjct: 309 KRLLHELKT----PDNIPRDTAIQILAGS--------------GRMEEATWV-------F 343

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
           +   +AG   +  I VF Q++   +   K  N        ++ VF KM  L   P+    
Sbjct: 344 RQAIDAGEVKD--ITVFEQMIDLFSKYRKYSN--------VVEVFDKMRGLGYFPDSNVI 393

Query: 649 SAILNACSRCNSFEDASMLLEELR 672
           + +LNA  + + FE A+ +  E++
Sbjct: 394 ALVLNAYGKLHDFEKANDVYLEMQ 417



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 146/263 (55%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
            + PD+ T+++L+    + GL++ A +   +M H  +  D+  Y+ L++   K      A
Sbjct: 4   ALSPDKYTYSTLITHFGKEGLFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDYSKA 63

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             I + +    I+P++V Y++MI+ + KA    +A ++  EM+  G+  D VSY T+L++
Sbjct: 64  ISIFSRLKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTLLTM 123

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
           Y +  +F EAL V  EM       D  T N ++  YG+ G   E  ++F  M+   V PN
Sbjct: 124 YVENKKFIEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPN 183

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           +++Y+TL+ VYS   L+ EA  +FR  ++  ++ +VV Y++++    K    E A +L+ 
Sbjct: 184 VVSYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQ 243

Query: 534 EMTKEGIRPNVVTYNSIIDAFGR 556
           EM   GI PN +TY++II  +G+
Sbjct: 244 EMQSRGIEPNAITYSTIISIWGK 266



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 186/395 (47%), Gaps = 40/395 (10%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+  G+ G  D A +  +   ++     +  +S LI    +     +AIS+F+ +KR
Sbjct: 13  STLITHFGKEGLFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDYSKAISIFSRLKR 72

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA--------- 307
             + P+LV YN++I+  GK  + F+    +  +M   GV PD +++ +LL          
Sbjct: 73  SGITPDLVVYNSMINVFGKAKL-FREARSLICEMRTXGVMPDTVSYTTLLTMYVENKKFI 131

Query: 308 --------------------------VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
                                     V  + G+ + A  LF  M   G++ ++ +YNTLL
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPNVVSYNTLL 191

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
                      A  +   M  K+I  NVVTY++M+  Y K    + A N+  EM+  GI 
Sbjct: 192 RVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE 251

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + ++Y+T++SI+ K+G+ + A ++ +++ SSGI  D V Y  ++  Y + G     +R+
Sbjct: 252 PNAITYSTIISIWGKVGKLDRAAMLFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRL 311

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
             ++K    +P+ +   T I + +  G  +EA  +FR+   AG   D+ ++  +ID   K
Sbjct: 312 LHELK----TPDNIPRDTAIQILAGSGRMEEATWVFRQAIDAGEVKDITVFEQMIDLFSK 367

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
                + V + D+M   G  P+      +++A+G+
Sbjct: 368 YRKYSNVVEVFDKMRGLGYFPDSNVIALVLNAYGK 402



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 189/372 (50%), Gaps = 13/372 (3%)

Query: 171 EWSKAIQCFAFAVKREERKNDQGKLA--SAMISILGRLGKVDLAKNIFETALNEGYGNTV 228
           ++SKAI  F+    R +R      L   ++MI++ G+      A+++       G     
Sbjct: 59  DYSKAISIFS----RLKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDT 114

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
            +++ L++ Y  +    EA+SVF  M+      +L T N +ID  G+ G+  K   ++F 
Sbjct: 115 VSYTTLLTMYVENKKFIEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMA-KEADKLFW 173

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M + GV+P+ +++N+LL V S   L+  A +LF  M  + I+Q++ TYN+++    K  
Sbjct: 174 SMRKLGVEPNVVSYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTL 233

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           + + A  ++ EM ++ I PN +TYST+I  + K G+LD A  +F +++  GI +D+V Y 
Sbjct: 234 EHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFEKLRSSGIEIDQVLYQ 293

Query: 409 TVLSIYAKLGRFEEALLVCKEMES-SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           T++  Y + G    A  +  E+++   I +D  T   +L G    G+ +E   +F Q   
Sbjct: 294 TMIVAYERAGLVSHAKRLLHELKTPDNIPRD--TAIQILAG---SGRMEEATWVFRQAID 348

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
                ++  +  +ID++SK   Y   +++F + +  G   D  + + +++A  K    E 
Sbjct: 349 AGEVKDITVFEQMIDLFSKYRKYSNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHDFEK 408

Query: 528 AVSLLDEMTKEG 539
           A  +  EM  EG
Sbjct: 409 ANDVYLEMQDEG 420



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 170/362 (46%), Gaps = 31/362 (8%)

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            R +  D +TY+TL+    K    D A   + +M    +  ++  YS +I+   K     
Sbjct: 2   ERALSPDKYTYSTLITHFGKEGLFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDYS 61

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            A+++FS +K  GI  D V YN++++++ K   F EA  +  EM + G+  D V+Y  LL
Sbjct: 62  KAISIFSRLKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTLL 121

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
             Y +  K+ E   +F +M+      +L T + +IDVY + G+ KEA ++F   ++ G++
Sbjct: 122 TMYVENKKFIEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVE 181

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            +VV Y+ L+       L   A  L   M ++ I  NVVTYNS++  +G++         
Sbjct: 182 PNVVSYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTL-------- 233

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
                  + E AN + +     + ++    T + II ++G++       GK +   R  +
Sbjct: 234 -------EHEKAN-NLIQEMQSRGIEPNAITYSTIISIWGKV-------GKLD---RAAM 275

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
           L     F+K+    I+ + V +  ++ A  R      A  LL EL+  DN     A  +L
Sbjct: 276 L-----FEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLHELKTPDNIPRDTAIQIL 330

Query: 687 MG 688
            G
Sbjct: 331 AG 332


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 190/364 (52%), Gaps = 3/364 (0%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L   +IS     G +D  K +F+  L +G    V  +S L+    R G  +EA +V N+M
Sbjct: 105 LYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM 164

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
             + + P++VTY  +ID   K G    H +++ + M+  G +P  +T+N LL+   + GL
Sbjct: 165 AEHGIHPDVVTYTGLIDGLCKDG-RATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL 223

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM--PAKNISPNVVTY 372
              A  +   M+ +G   D+ TYNTL+  +C   ++D A ++   M      + PNV T+
Sbjct: 224 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 283

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +I G  K GRL  A+ +  +M   G   + V+YN +L    K G+ +EA+ + K++  
Sbjct: 284 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 343

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G   ++ TY+ L+ G+ K    +  + +F +M+   ++P L  Y+TL+    K G  ++
Sbjct: 344 LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQ 403

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A  +F+E   A  + D++ ++ +ID   K G  +    L  +M + G+RP+ +T++++I+
Sbjct: 404 AKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLIN 463

Query: 553 AFGR 556
              +
Sbjct: 464 RLSK 467



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 183/360 (50%), Gaps = 3/360 (0%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            + ++  L + G++D A  + E    +G+   V  +  LIS +  +G       +F+ M 
Sbjct: 71  CTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEML 130

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              +  N+VTY+ ++    + G  +K    + + M  +G+ PD +T+  L+    + G  
Sbjct: 131 GKGISANVVTYSCLVHGLCRLG-QWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 189

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             A +L N MV +G +    TYN LL  +CK   +  AF+I+  M  K    +VVTY+T+
Sbjct: 190 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 249

Query: 376 IDGYAKAGRLDDALNMFSEM--KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           + G    G++D+AL +F+ M      +  +  ++N ++    K GR  +A+ + ++M   
Sbjct: 250 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 309

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           G   + VTYN LLGG  K GK  E   +++Q+      PN  TYS LID + K  +   A
Sbjct: 310 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIA 369

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
             +F E +  GL   +  Y+ L+ +LCK G +E A SL  EM      P+++++N++ID 
Sbjct: 370 KGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDG 429



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 224/468 (47%), Gaps = 43/468 (9%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           + +++ LI+   ++   +EA+ +   M+     PN VT   ++D  C  G +D    +E+
Sbjct: 33  IVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMD--EAMEL 90

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
            + M + G   D + + +L++     G  +  + LF+EM+ +GI  ++ TY+ L+  +C+
Sbjct: 91  LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 150

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             Q   A  ++  M    I P+VVTY+ +IDG  K GR   A+++ + M   G     V+
Sbjct: 151 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 210

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM- 465
           YN +LS   K G   +A  + + M   G + D VTYN L+ G   +GK DE  ++F  M 
Sbjct: 211 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 270

Query: 466 -KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
              +C+ PN+ T++ LI    K G   +A++I R+  + G   ++V Y+ L+    K G 
Sbjct: 271 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 330

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD--- 581
           ++ A+ L  ++   G  PN  TY+ +ID F +         ++ + L  +  +  L+   
Sbjct: 331 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRML-----NIAKGLFCEMRTHGLNPAL 385

Query: 582 --------AMCSQDDKD-----VQEAGRTDNQI-IKVFGQLV--AEKAG--QGKKENRCR 623
                   ++C +   +      QE G  + +  I  F  ++    KAG  Q  KE +  
Sbjct: 386 FDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQ-- 443

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
                      KM ++ ++P+ +TFS ++N  S+    ++A   LE +
Sbjct: 444 ----------MKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERM 481



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 191/409 (46%), Gaps = 16/409 (3%)

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGID 331
           C  GGV     + +  +M R  V PD +++N+L+  +C    L EA   L  EM   G  
Sbjct: 9   CRNGGV--FEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAV-GLLLEMEAAGCF 65

Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
            +  T  TL+D +CK  +MD A E++  M  K    +VV Y T+I G+   G LD    +
Sbjct: 66  PNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKEL 125

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           F EM   GI  + V+Y+ ++    +LG+++EA  V   M   GI  D VTY  L+ G  K
Sbjct: 126 FDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCK 185

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
            G+      +   M      P+ +TY+ L+    K GL  +A +I R   + G KADVV 
Sbjct: 186 DGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVT 245

Query: 512 YSALIDALCKNGLVESAVSLLDEM--TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           Y+ L+  LC  G V+ A+ L + M   +  + PNV T+N +I    +       V  + R
Sbjct: 246 YNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV-KIHR 304

Query: 570 DLGKQKESANLDAM------CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
            + K+    NL         C +  K ++EA     Q++ + G +          +  C+
Sbjct: 305 KMVKKGSCGNLVTYNMLLGGCLKAGK-IKEAMELWKQVLDL-GFVPNSFTYSILIDGFCK 362

Query: 624 QEILCIL-GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             +L I  G+F +M    + P +  ++ ++ +  +  S E A  L +E+
Sbjct: 363 MRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 411



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 172/360 (47%), Gaps = 30/360 (8%)

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L  +C  GG++EA   L  EM  + +  DI +YNTL++ +CK  ++  A  ++ EM A  
Sbjct: 5   LKGLCRNGGVFEAM-GLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
             PN VT +T++DG  K GR+D+A+ +   MK  G   D V Y T++S +   G  +   
Sbjct: 64  CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +  EM   GI  + VTY+ L+ G  + G++ E   +   M    + P+++TY+ LID  
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            K G    AM +     + G +   V Y+ L+  LCK GLV  A  +L  M ++G + +V
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV 243

Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
           VTYN+++          C       D GK  E+  L      ++  ++    T N +I  
Sbjct: 244 VTYNTLMKGL-------C-------DKGKVDEALKLFNSMFDNENCLEPNVFTFNMLI-- 287

Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
                    G   KE R  + +     + +KM K     N+VT++ +L  C +    ++A
Sbjct: 288 ---------GGLCKEGRLTKAV----KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEA 334



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 184/385 (47%), Gaps = 9/385 (2%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L   G+W +A          E   +      + +I  L + G+   A ++   
Sbjct: 141 YSCLVHGLCRLGQWKEANT--VLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNL 198

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
            + +G   +   ++ L+S   + G   +A  +   M     K ++VTYN ++   C KG 
Sbjct: 199 MVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGK 258

Query: 278 VDFKHVVEIFDDML--RNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDI 334
           VD    +++F+ M    N ++P+  TFN L+  +C  G L +A + +  +MV +G   ++
Sbjct: 259 VD--EALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK-IHRKMVKKGSCGNL 315

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TYN LL    K  ++  A E+  ++      PN  TYS +IDG+ K   L+ A  +F E
Sbjct: 316 VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE 375

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M+  G+      YNT+++   K G  E+A  + +EM ++    D +++N ++ G  K G 
Sbjct: 376 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 435

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
           +  V+ +  +M    + P+ LT+STLI+  SK G   EA         +G   D ++Y +
Sbjct: 436 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 495

Query: 515 LIDALCKNGLVESAVSLLDEMTKEG 539
           L+  L   G     ++LL +M  +G
Sbjct: 496 LLKGLSSKGDTTEIINLLHQMAAKG 520



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 173/364 (47%), Gaps = 5/364 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+  L   G  + A+      V++ E  ++     + ++S L + G V  A  I   
Sbjct: 176 YTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV--TYNVLLSGLCKEGLVIDAFKILRM 233

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM--KRYNLKPNLVTYNAVIDACGKG 276
            + +G    V  ++ L+      G   EA+ +FNSM      L+PN+ T+N +I    K 
Sbjct: 234 MIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKE 293

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G      V+I   M++ G   + +T+N LL  C + G  + A  L+ +++  G   + FT
Sbjct: 294 G-RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFT 352

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y+ L+D  CK   +++A  +  EM    ++P +  Y+T++    K G L+ A ++F EM 
Sbjct: 353 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 412

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
                 D +S+NT++    K G F+    +  +M   G+R DA+T++ L+    K G+ D
Sbjct: 413 NANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELD 472

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E +   E+M A   +P+ L Y +L+   S  G   E + +  +    G   D  + S ++
Sbjct: 473 EAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTIL 532

Query: 517 DALC 520
             LC
Sbjct: 533 TCLC 536



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 85/201 (42%), Gaps = 39/201 (19%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    ++  +++AK +F      G    ++ ++ L+++  + G  ++A S+F  M  
Sbjct: 354 SILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGN 413

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEI------------------------------ 286
            N +P+++++N +ID   K G DF+ V E+                              
Sbjct: 414 ANCEPDIISFNTMIDGTLKAG-DFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELD 472

Query: 287 -----FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
                 + M+ +G  PD + ++SLL   S  G      NL ++M  +G   D    +T+L
Sbjct: 473 EAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTIL 532

Query: 342 DAICKGAQMDLAFEIMAEMPA 362
             +C   Q     ++M  +P 
Sbjct: 533 TCLCHSIQ---EVDVMELLPT 550


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 200/440 (45%), Gaps = 47/440 (10%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M+    QPD  TF  LL    R    E AR L   M   G   D   YN L+    K   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
              AF+ +AEM   +  P VVTY+ ++DG  KAGR  DA+ +  EM+  G   +  +YN 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++    +  + +EA  + +EM   G   D VTYN+ + G  K  + DE R+   +M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 177

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           V+P++++Y+T+I+   K G    A ++  +    G   DVV YS+LID  CK G VE A+
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            LLD M K G RPN+V YNS++ A  R              +GK +     D +   + +
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLG-----------HIGKAE-----DMLVEMERR 281

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
                  + N  I   G   AE+  + K              VF +M +    PN  ++S
Sbjct: 282 GFTPDVVSYNACID--GLCKAERVKKAK-------------AVFDRMVERGCTPNASSYS 326

Query: 650 AILNACSRCNSFEDASMLLEELR----LFDNQVYGV-AHGLLMGYRDNIWVQALSLFDEV 704
            ++    +    +DA  L+E+ R    + D  +Y V   GL  G R   + +A +LF   
Sbjct: 327 MLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGR---FDEACALFS-- 381

Query: 705 KLMDSSTASA---FYNALTD 721
           K++D         FYN + D
Sbjct: 382 KVLDEKICEPDVFFYNVMLD 401



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 155/620 (25%), Positives = 282/620 (45%), Gaps = 63/620 (10%)

Query: 152 KLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKV 209
           K C  D +TF  LLR L    +  KA Q      +     +D   + +A+IS   +    
Sbjct: 4   KSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDA--IYNALISGYSKAKDF 61

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
             A       +      TV  ++ ++    ++G  ++A+ + + M+     PN+ TYN +
Sbjct: 62  GQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVI 121

Query: 270 IDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           ++  C +  +D     ++ ++M   G  PD +T+NS +    +    + AR     M   
Sbjct: 122 VEGLCEERKLD--EAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM--- 176

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            +  D+ +Y T+++ +CK   +D A  ++ +M  +  +P+VVTYS++IDG+ K G ++ A
Sbjct: 177 PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERA 236

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           + +   M  LG   + V+YN++L    +LG   +A  +  EME  G   D V+YNA + G
Sbjct: 237 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 296

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
             K  +  + + +F++M     +PN  +YS L++   K     +A+ +  + ++     D
Sbjct: 297 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVD 356

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGI-RPNVVTYNSIIDAFGRSATTECTVDDV 567
           ++LY+ L+D LCK G  + A +L  ++  E I  P+V  YN ++D       + C    +
Sbjct: 357 ILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLD-------SHCKRRQI 409

Query: 568 ERDLGKQKESAN------------LDAMCSQD---DKDVQEAGRTDNQIIKVF---GQLV 609
           ++ L   K+               +  +C  D   D +       D   I  F   G LV
Sbjct: 410 DKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLV 469

Query: 610 AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
                 GK            L +F++  K    P+VVT+SA++      N  E+A +L  
Sbjct: 470 DAMCKCGKSAA--------ALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFT 521

Query: 670 ELRLFDNQVYGVAHGLLMGYRDNIWVQ-ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
           +L +       + + +++GY +N      L LF  V+L++S       NA T     FG+
Sbjct: 522 KLDV------ALWNAMILGYAENGSGDLGLKLF--VELIESDVEP---NART-----FGK 565

Query: 729 KRGAQLVVLE--GKRRQVWE 746
           +   +LV  E  GK R +++
Sbjct: 566 EISGKLVKAESLGKARGLFD 585



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 214/460 (46%), Gaps = 33/460 (7%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V +++ +I+   +SG    A  + + M      P++VTY+++ID   KGG + +  + + 
Sbjct: 182 VVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGG-EVERAMGLL 240

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           D ML+ G +P+ + +NSLL    R G    A ++  EM  RG   D+ +YN  +D +CK 
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 300

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            ++  A  +   M  +  +PN  +YS +++   K   LDDA+ +  + +     +D + Y
Sbjct: 301 ERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLY 360

Query: 408 NTVLSIYAKLGRFEEAL-LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM- 465
             +L    K GRF+EA  L  K ++      D   YN +L  + K+ + D+  ++ +QM 
Sbjct: 361 TVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQML 420

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           + +C   N++T++ L+          +A  +       G   D V Y  L+DA+CK G  
Sbjct: 421 ERNCC--NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKS 478

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE-----CTVDDVE----RDLGKQKE 576
            +A+ L +E  K G  P+VVTY+++I         E      T  DV       LG  + 
Sbjct: 479 AAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAEN 538

Query: 577 SAN---LDAMCSQDDKDVQEAGRTDNQIIKVFGQLV-AEKAGQGKKENRCRQEILCILGV 632
            +    L       + DV+   RT  +  ++ G+LV AE  G+ +             G+
Sbjct: 539 GSGDLGLKLFVELIESDVEPNARTFGK--EISGKLVKAESLGKAR-------------GL 583

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           F +  K    P++   + +++  ++C   E+A  +   ++
Sbjct: 584 FDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMK 623



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 164/406 (40%), Gaps = 102/406 (25%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S++I    + G+V+ A  + ++ L  G    + A+++L+ A  R G+  +A  +   M+R
Sbjct: 221 SSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMER 280

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQP------------------- 297
               P++V+YNA ID   K     K    +FD M+  G  P                   
Sbjct: 281 RGFTPDVVSYNACIDGLCKAE-RVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELD 339

Query: 298 ----------------DRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI-DQDIFTYNTL 340
                           D + +  LL    +GG ++ A  LF++++   I + D+F YN +
Sbjct: 340 DAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVM 399

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           LD+ CK  Q+D A +I  +M  +N   NVVT++ ++ G     RL DA  M   M   G 
Sbjct: 400 LDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGF 458

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY------------------ 442
             D V+Y T++    K G+   AL + +E    G   D VTY                  
Sbjct: 459 IPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYL 518

Query: 443 ----------NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY--------------- 477
                     NA++ GY + G  D   ++F ++    V PN  T+               
Sbjct: 519 LFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLG 578

Query: 478 ---------------------STLIDVYSKGGLYKEAMQIFREFKQ 502
                                +TLIDV++K G  +EA +IF   KQ
Sbjct: 579 KARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 229/488 (46%), Gaps = 21/488 (4%)

Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
           +++ A+I +    G  D A ++     + G+   + + + L++    S     AI+++  
Sbjct: 150 QVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQ 209

Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           +K + L PN  TY   I   C KG  +    +++F DM  +GV P+  ++ + +      
Sbjct: 210 LKAFGLNPNDYTYTIAIKGFCRKG--NLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLH 267

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           G  +    +  ++++  I  D+F Y  ++   C   ++  A  I+ EM  +  +P+V  Y
Sbjct: 268 GRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVY 327

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
             +I GY   G L  AL +  EM   G+  + V  +++L   +++G   E     KE + 
Sbjct: 328 CALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKK 387

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            GI  D   YN ++    K GK +E   +  +MK   + P+++ Y+T+I  Y   G   +
Sbjct: 388 MGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVD 447

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A+ I+RE K  G K D+V Y+ L     +NGL + A+SLL+ M  +G++P+ VT+N II+
Sbjct: 448 ALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIE 507

Query: 553 AF---GRSATTECTVDDVERDLGKQKESANLDAMCSQD--DKDVQEAGRTDNQ--IIK-- 603
                G+    +   D++E     +  SA ++  C  +  +K      R   Q  I+K  
Sbjct: 508 GLCIGGKVDDAQAFFDNLEEKC-LENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKA 566

Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
            F +L+     +G  E     + LC+L   + M  L I P ++ +S ++ A  +    E 
Sbjct: 567 SFFKLLGNLCSEGDSE-----KALCLL---ETMVALNINPTMIMYSKVIGALFQAGEMEK 618

Query: 664 ASMLLEEL 671
           A  +   L
Sbjct: 619 AQYVFNML 626



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 185/400 (46%), Gaps = 55/400 (13%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++  L +LGKV+ A  +      +     +  ++ +IS Y   G   +A++++  MK 
Sbjct: 398 NVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKD 457

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              KP++VTYN +     + G+  +  + + + M   GV+PD +T N ++     GG  +
Sbjct: 458 IGHKPDIVTYNVLAGGFSRNGLT-QEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVD 516

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE----------------- 359
            A+  F+ +  + ++     Y+ +++  C+   ++ AF ++                   
Sbjct: 517 DAQAFFDNLEEKCLEN----YSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLL 572

Query: 360 ------------------MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
                             M A NI+P ++ YS +I    +AG ++ A  +F+ +   G+ 
Sbjct: 573 GNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLA 632

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK------QGKY 455
            D ++Y  +++ Y ++ + +EA  V  +M++ GI  D +TY  LL    K          
Sbjct: 633 PDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSL 692

Query: 456 DEVRR---------MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
           D ++          ++ +MK   + P+++ Y+ LID + K    ++A+ +F E    GL 
Sbjct: 693 DAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLA 752

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            D V Y+AL+   C  G ++ AV L DEM  +GIRP+  T
Sbjct: 753 PDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHT 792



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/427 (24%), Positives = 188/427 (44%), Gaps = 66/427 (15%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + S+++  L ++G      N F+     G       ++ ++ A  + G  +EA+ +   M
Sbjct: 361 ILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEM 420

Query: 255 KRYNLKPNLVTYNAVIDACGKGG--VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
           K   + P+++ Y  VI      G  VD    + I+ +M   G +PD +T+N L    SR 
Sbjct: 421 KGKKMVPDIINYTTVISGYFLKGKVVD---ALNIYREMKDIGHKPDIVTYNVLAGGFSRN 477

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
           GL + A +L N M  +G+  D  T+N +++ +C G ++D A      +  K +      Y
Sbjct: 478 GLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLE----NY 533

Query: 373 STMIDGYAKA----------------GRL-------------------DDALNMFSEMKF 397
           S M++GY +A                GR+                   + AL +   M  
Sbjct: 534 SAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVA 593

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           L I    + Y+ V+    + G  E+A  V   +   G+  D +TY  ++ GY +  K  E
Sbjct: 594 LNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKE 653

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY-----------KEAMQ----IFREFKQ 502
              +   MK   + P+++TY+ L++  SK  L            KE M     ++ E K 
Sbjct: 654 AWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKD 713

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC 562
             +K DV+ Y+ LID  CK   ++ A++L +EM   G+ P+ VTY +++  +       C
Sbjct: 714 MDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGY-------C 766

Query: 563 TVDDVER 569
            V ++++
Sbjct: 767 NVGNIKK 773



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 137/619 (22%), Positives = 254/619 (41%), Gaps = 132/619 (21%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           YT  ++    +G  ++AI  F      EE        + +  I  L   G+ DL   + +
Sbjct: 222 YTIAIKGFCRKGNLAEAIDVFR---DMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQ 278

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKG 276
             +N      V+A++ +I  +      +EA S+   M++    P++  Y A+I   C  G
Sbjct: 279 DVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVG 338

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
             +    + + D+M+  GV+ + +  +S+L   S+ G+     N F E    GI  D   
Sbjct: 339 --NLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEAC 396

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA-------- 388
           YN ++DA+CK  +++ A E++ EM  K + P+++ Y+T+I GY   G++ DA        
Sbjct: 397 YNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMK 456

Query: 389 ---------------------------LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
                                      L++ + M+  G+  D V++N ++      G+ +
Sbjct: 457 DIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVD 516

Query: 422 EALLVCKEMESSGIRKDAVTYNA-------------------------------LLGGYG 450
           +A      +E   +   +   N                                LLG   
Sbjct: 517 DAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLC 576

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
            +G  ++   + E M A  ++P ++ YS +I    + G  ++A  +F      GL  DV+
Sbjct: 577 SEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVI 636

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD 570
            Y+ +I+  C+   ++ A  +L +M   GI P+V+TY  +++         C+  D+   
Sbjct: 637 TYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLN--------NCSKIDL--- 685

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
              +  S++LDAM S                                KEN      L   
Sbjct: 686 ---RSSSSSLDAMKS--------------------------------KENMMDPSAL--- 707

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL---RLFDNQVYGVAHGLLM 687
             + +M  + IKP+V+ ++ +++   + N+ +DA  L  E+    L  + V   A  LL 
Sbjct: 708 --WSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTA--LLS 763

Query: 688 GYRD--NIWVQALSLFDEV 704
           GY +  NI  +A+ LFDE+
Sbjct: 764 GYCNVGNIK-KAVVLFDEM 781



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 118/231 (51%), Gaps = 16/231 (6%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           +F  L+      G  ++A+ +  +M   N+ P ++ Y+ VI A  + G + +    +F+ 
Sbjct: 567 SFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAG-EMEKAQYVFNM 625

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL-------- 341
           ++  G+ PD IT+  ++    R    + A ++  +M +RGI+ D+ TY  LL        
Sbjct: 626 LVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDL 685

Query: 342 -------DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
                  DA+     M     + +EM   +I P+V+ Y+ +ID + K   + DA+N+F+E
Sbjct: 686 RSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNE 745

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           M   G+  D V+Y  +LS Y  +G  ++A+++  EM + GIR DA T + L
Sbjct: 746 MIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 141/290 (48%), Gaps = 22/290 (7%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVT 265
           GKVD A+  F+    +   N    +SA+++ Y  + +  +A ++   + K+  +      
Sbjct: 513 GKVDDAQAFFDNLEEKCLEN----YSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASF 568

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           +  + + C +G  D +  + + + M+   + P  I ++ ++    + G  E A+ +FN +
Sbjct: 569 FKLLGNLCSEG--DSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNML 626

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK---- 381
           V RG+  D+ TY  +++  C+  +M  A+ ++ +M  + I P+V+TY+ +++  +K    
Sbjct: 627 VDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLR 686

Query: 382 --AGRLD---------DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
             +  LD         D   ++SEMK + I  D + Y  ++  + K    ++A+ +  EM
Sbjct: 687 SSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEM 746

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
              G+  D VTY ALL GY   G   +   +F++M    + P+  T S L
Sbjct: 747 IDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 91/460 (19%), Positives = 192/460 (41%), Gaps = 60/460 (13%)

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAIC-----------------KGAQMDLA----FEI 356
           A + FN++   G   D +TY  ++  +C                 K   +D      FE 
Sbjct: 76  AFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEA 135

Query: 357 MAE-MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           + + +  ++ S  V     +I     +G  D A ++  + K  G     +S N +++   
Sbjct: 136 LGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLV 195

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           +  + + A+ + +++++ G+  +  TY   + G+ ++G   E   +F  M+   V+PN  
Sbjct: 196 ESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSF 255

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           +Y+T I+     G      ++ ++   A +  DV  Y+ +I   C    ++ A S+L EM
Sbjct: 256 SYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREM 315

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
            K+G  P+V  Y ++I  +       C V ++ + L    E  +         K V+   
Sbjct: 316 EKQGFAPDVYVYCALISGY-------CMVGNLLKALALHDEMVS---------KGVKTNC 359

Query: 596 RTDNQIIKVFGQ--LVAEKAGQGKK--------ENRCRQEI---LCILG-------VFQK 635
              + I++   Q  + +E A Q K+        +  C   +   LC LG       +  +
Sbjct: 360 VILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVE 419

Query: 636 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNI 693
           M   K+ P+++ ++ +++         DA  +  E++   ++   V + +L G   R+ +
Sbjct: 420 MKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGL 479

Query: 694 WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
             +ALSL + ++       +  +N + + L   G+   AQ
Sbjct: 480 TQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQ 519


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 190/379 (50%), Gaps = 38/379 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           ++  L + G+   A+NIF++ + +G         A+I          EA+ +F+ M++  
Sbjct: 415 LLDYLCKNGRCTEARNIFDSVIRKGIKP-----DAMI---------DEAVCIFDKMRQQG 460

Query: 259 LKPNLVTYNAVIDA-CGKGGVD-----FKHVV----------------EIFDDMLRNGVQ 296
           L PN+V Y A+IDA C  G VD     F  ++                E+  +ML  G++
Sbjct: 461 LSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIR 520

Query: 297 PDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE 355
            D + FN+L+  +C  G + EA R L   M+  G+  D+ +YNTL+D  C   + D A +
Sbjct: 521 LDVVVFNTLMCDLCREGRVMEAQR-LIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAK 579

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           ++  M +  + PN  TY+T++ GY KA R+DDA ++  EM   G   D V+YNT+L    
Sbjct: 580 LLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLF 639

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           + GRF EA  +   M +S  + D  TYN +L G  K    DE  +MF+ + +  +  +++
Sbjct: 640 QTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHII 699

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           T++ +I    KGG  ++AM +F      GL  DV  Y  + + L K G +E    L   M
Sbjct: 700 TFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAM 759

Query: 536 TKEGIRPNVVTYNSIIDAF 554
            + G  PN    N+++  F
Sbjct: 760 EENGTAPNSRMLNALVRRF 778



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 143/541 (26%), Positives = 255/541 (47%), Gaps = 56/541 (10%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSG------YCQEAISVFNSMKRY---NLKPN 262
           A  +F+  L      +V AF+ L++A  R+         Q  IS+F+ M R     + P+
Sbjct: 135 ALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPD 194

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNL 321
             TY+ +I    + G   +H   +F  +L+ G + + I FN LL  +C    L EA   L
Sbjct: 195 RCTYSILIGCFCRMG-RLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNIL 253

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFE---IMAEMPAKNISPNVVTYSTMIDG 378
              M   G   ++ +YNTL+   C   + + A E   +MA+    +  P+VV+Y+T+I+G
Sbjct: 254 LWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVING 313

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           + + G++D A N+F +M   GI  D V+YNTV+    K    + A  V ++M   G++  
Sbjct: 314 FFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPS 373

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
             TYN L+ GY   GK+ EV R+ E+M    + P+   Y+ L+D   K G   EA  IF 
Sbjct: 374 NGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFD 433

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
              + G+K D               +++ AV + D+M ++G+ PNVV Y ++IDA     
Sbjct: 434 SVIRKGIKPD--------------AMIDEAVCIFDKMRQQGLSPNVVNYGALIDAL---- 475

Query: 559 TTECTVDDVERDLGKQKESAN-LDAMCSQD--DKDVQEAGRTDNQIIK----VFGQLVAE 611
              C +  V+  + K  +  N +  +C+ +  +K  +      +Q I+    VF  L+ +
Sbjct: 476 ---CKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCD 532

Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE-- 669
              +G+     R        + + M ++ ++P+V++++ +++        ++A+ LL+  
Sbjct: 533 LCREGRVMEAQR--------LIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVM 584

Query: 670 -ELRLFDNQVYGVAHGLLMGYRDNIWV-QALSLFDEVKLMDSSTASAFYNALTDMLWHFG 727
             + L  N+     + LL GY     +  A SL  E+ +   +     YN +   L+  G
Sbjct: 585 VSIGLKPNEF--TYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTG 642

Query: 728 Q 728
           +
Sbjct: 643 R 643



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 189/396 (47%), Gaps = 43/396 (10%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           VD AK +F+  L++G   +   ++ LI  Y  +G  +E + +   M  ++L+P+   Y  
Sbjct: 355 VDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYAL 414

Query: 269 VIDACGKGG--------------------VDFKHVVEIFDDMLRNGVQPDRITFNSLL-A 307
           ++D   K G                          V IFD M + G+ P+ + + +L+ A
Sbjct: 415 LLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDA 474

Query: 308 VCSRG-----------------GL-----WEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
           +C  G                 GL     WE A  L  EM+ +GI  D+  +NTL+  +C
Sbjct: 475 LCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLC 534

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           +  ++  A  ++  M    + P+V++Y+T++DG+   GR D+A  +   M  +G+  +  
Sbjct: 535 REGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEF 594

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +YNT+L  Y K  R ++A  + +EM  +G   D VTYN +L G  + G++ E + ++  M
Sbjct: 595 TYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNM 654

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
                  ++ TY+ +++   K     EA ++F+     GL+  ++ ++ +I AL K G  
Sbjct: 655 INSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKK 714

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           E A+ L   ++  G+ P+V TY  I +   +  + E
Sbjct: 715 EDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLE 750



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 197/424 (46%), Gaps = 46/424 (10%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL  L   G  ++A   F   +++       G    AMI         D A  IF+ 
Sbjct: 412 YALLLDYLCKNGRCTEARNIFDSVIRK-------GIKPDAMI---------DEAVCIFDK 455

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM--KRYNL----------------- 259
              +G    V  + ALI A  + G   +AI  FN M  + Y L                 
Sbjct: 456 MRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEML 515

Query: 260 ----KPNLVTYNAVI-DACGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
               + ++V +N ++ D C +G V + + ++E+   MLR GV+PD I++N+L+   C  G
Sbjct: 516 DQGIRLDVVVFNTLMCDLCREGRVMEAQRLIEL---MLRVGVRPDVISYNTLVDGHCLTG 572

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
              EAA+ L + MV  G+  + FTYNTLL   CK  ++D A+ ++ EM     +P+VVTY
Sbjct: 573 RTDEAAK-LLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTY 631

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           +T++ G  + GR  +A  ++  M       D  +YN +L+   K    +EA  + + + S
Sbjct: 632 NTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCS 691

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
            G++   +T+N ++G   K GK ++   +F  + A  + P++ TY  + +   K G  +E
Sbjct: 692 KGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEE 751

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
              +F   ++ G   +  + +AL+      G +  A + L ++ ++       T + +I 
Sbjct: 752 LGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLIS 811

Query: 553 AFGR 556
            + R
Sbjct: 812 LYSR 815



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 148/300 (49%), Gaps = 3/300 (1%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L R G+V  A+ + E  L  G    V +++ L+  +  +G   EA  + + M    LKPN
Sbjct: 533 LCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPN 592

Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
             TYN ++   C    +D  +   +  +ML NG  PD +T+N++L    + G +  A+ L
Sbjct: 593 EFTYNTLLHGYCKARRIDDAY--SLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKEL 650

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           +  M++     D++TYN +L+ +CK   +D AF++   + +K +  +++T++ MI    K
Sbjct: 651 YLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLK 710

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
            G+ +DA+++F+ +   G+  D  +Y  +     K G  EE  ++   ME +G   ++  
Sbjct: 711 GGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRM 770

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
            NAL+  +  +G          ++     S    T S LI +YS+G   + A  +  +++
Sbjct: 771 LNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLAKSLPEKYR 830



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 191/434 (44%), Gaps = 40/434 (9%)

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG------LWEAARNLF 322
           + D    G +     +++FD +L +        FN LL   SR          +   +LF
Sbjct: 121 IADRAQSGSLASHDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLF 180

Query: 323 NEMVHRGIDQ---DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           + MV    D+   D  TY+ L+   C+  +++  F +   +       N + ++ ++ G 
Sbjct: 181 DRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGL 240

Query: 380 AKAGRLDDALNMFS-EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM-ESSGIR- 436
             A RLD+A N+    M   G   + VSYNT++  +    R EEAL +   M +  G+  
Sbjct: 241 CDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSC 300

Query: 437 -KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D V+YN ++ G+ ++G+ D+   +F QM    + P+++TY+T+ID   K  +   A  
Sbjct: 301 PPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKA 360

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF- 554
           +F++    G+K     Y+ LI      G  +  V LL+EM+   + P+   Y  ++D   
Sbjct: 361 VFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLC 420

Query: 555 --GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQ-----------------EAG 595
             GR        D V R  G + ++   +A+C  D    Q                 + G
Sbjct: 421 KNGRCTEARNIFDSVIRK-GIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLG 479

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
           R D+ I+K F Q++ E  G    E   + E L    VF+ + +  I+ +VV F+ ++   
Sbjct: 480 RVDDAILK-FNQMINEVYGLCTVEKWEKAEEL----VFEMLDQ-GIRLDVVVFNTLMCDL 533

Query: 656 SRCNSFEDASMLLE 669
            R     +A  L+E
Sbjct: 534 CREGRVMEAQRLIE 547


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 223/471 (47%), Gaps = 34/471 (7%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
             S LI+ +   G    + SV   + +   +PN +  N ++   C KG V  K  +   D
Sbjct: 47  TLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEV--KKSLHFHD 104

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            ++  G Q D++++  LL    + G    A  L   +  R    D+  Y+T++D +CK  
Sbjct: 105 KVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDK 164

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            +D A+++ +EM A+ I P+V+TY+T+I G+  AG+L +A  + +EM    I  +  +YN
Sbjct: 165 LVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYN 224

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T++    K G+ +E+  +   M   G++ D V Y+ L+ GY   G+  + +++F  M   
Sbjct: 225 TLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQT 284

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            V+P++ +Y+ +I+   KG    EAM + RE     +  D V YS+LID LCK G + + 
Sbjct: 285 GVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTI 344

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV----ERDL--GKQKESANLDA 582
           + L  EM   G   N+VTYNS++D   ++   +  +       ER +   K   +A +D 
Sbjct: 345 LDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDG 404

Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK 642
           +C        + G+   Q + V G  +            C++      G+F +   +K K
Sbjct: 405 LCKGGR---LKKGQALFQHLLVKGYCIDVWTYTVMISGLCKE------GMFDEALAMKSK 455

Query: 643 -------PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
                  PN VTF  I+ +    +  + A  LL E+         +A GLL
Sbjct: 456 MEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEM---------IAKGLL 497



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 195/385 (50%), Gaps = 5/385 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL  L   GE   AI+       R  R +    + S +I  L +   VD A +++  
Sbjct: 118 YGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVV--MYSTIIDGLCKDKLVDEAYDLYSE 175

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
               G    V  ++ LI  +  +G   EA  + N M   N+ PN+ TYN +ID  C +G 
Sbjct: 176 MNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGK 235

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           V  K    +   M + GV+PD + ++ L+      G  + A+ +F  MV  G++ D+++Y
Sbjct: 236 V--KESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSY 293

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N +++ +CKG ++D A  ++ EM  KN+ P+ VTYS++IDG  K GR+   L++  EM  
Sbjct: 294 NIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHH 353

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   + V+YN++L    K    ++A+ +  +M+  GI+ +  TY AL+ G  K G+  +
Sbjct: 354 RGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKK 413

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
            + +F+ +       ++ TY+ +I    K G++ EA+ +  + +  G   + V +  +I 
Sbjct: 414 GQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIR 473

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRP 542
           +L +    + A  LL EM  +G+ P
Sbjct: 474 SLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 138/273 (50%), Gaps = 7/273 (2%)

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           P  I F  +L    +   +    +L  +M  +GI  D+ T + L++  C   QM  +F +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           + ++      PN +  +T++ G    G +  +L+   ++   G  +D+VSY  +L+   K
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
           +G    A+ + + +E    R D V Y+ ++ G  K    DE   ++ +M A  + P+++T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y+TLI  +   G   EA  +  E     +  ++  Y+ LID LCK G V+ + +LL  MT
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           K+G++P+VV Y+ ++D +       C V +V++
Sbjct: 248 KKGVKPDVVIYSILMDGY-------CLVGEVQK 273


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 172/323 (53%), Gaps = 3/323 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK 281
           GY   V+ ++ +I+   + G    A  +F  M     +P++VTY+ +ID+ C    V+  
Sbjct: 5   GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVN-- 62

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             ++IF  M   G+ P+  T+NSL+        W  A  + NEM+   I  +I T++ L+
Sbjct: 63  EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLI 122

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           +  CK   +  A  ++  M    + PNVVTYS++++GY+    + +A  +F  M   G  
Sbjct: 123 NIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCK 182

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D  SYN +++ Y K  R  EA  +  EM   G+  D V+YN L+ G  + G+  E   +
Sbjct: 183 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDL 242

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F+ M  +   P+L TYS L+D + K G   +A ++FR  +   LK ++V+Y+ LIDA+CK
Sbjct: 243 FKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCK 302

Query: 522 NGLVESAVSLLDEMTKEGIRPNV 544
           +  ++ A  L  E+  +G++PN+
Sbjct: 303 SRNLKEARKLFSELFVQGLQPNM 325



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 149/269 (55%)

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           M+  G QPD  T+ +++    + G   AA  LF +M   G   D+ TY+T++D++CK  +
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           ++ A +I + M AK ISPN+ TY+++I G     R  +A  M +EM  L I  + V+++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +++I+ K G   EA  V K M   G+  + VTY++L+ GY  Q +  E R++F+ M    
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
             P++ +Y+ LI+ Y K     EA Q+F E    GL  D+V Y+ LID LC+ G +  A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            L   M   G  P++ TY+ ++D F +  
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQG 269



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 163/298 (54%), Gaps = 1/298 (0%)

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           +P++ TY  +I+   K G +      +F  M   G QPD +T+++++    +      A 
Sbjct: 7   QPDVHTYTTIINGLCKIG-ETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 65

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
           ++F+ M  +GI  +IFTYN+L+  +C  ++   A  ++ EM + NI PN+VT+S +I+ +
Sbjct: 66  DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 125

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K G + +A  +   M  +G+  + V+Y+++++ Y+      EA  +   M + G + D 
Sbjct: 126 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDV 185

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
            +YN L+ GY K  +  E +++F +M    ++P++++Y+TLID   + G  +EA  +F+ 
Sbjct: 186 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 245

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
               G   D+  YS L+D  CK G +  A  L   M    ++PN+V YN +IDA  +S
Sbjct: 246 MLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 303



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 173/317 (54%), Gaps = 9/317 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+ L ++G+   A  +F+     G    V  +S +I +  +     EA+ +F+ MK 
Sbjct: 14  TTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKA 73

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAV-CSRG 312
             + PN+ TYN++I    +G  +F    E   + ++M+   + P+ +TF+ L+ + C  G
Sbjct: 74  KGISPNIFTYNSLI----QGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEG 129

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
            ++E AR +   M   G++ ++ TY++L++     A++  A ++   M  K   P+V +Y
Sbjct: 130 NVFE-ARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSY 188

Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
           + +I+GY KA R+ +A  +F+EM   G+  D VSYNT++    +LGR  EA  + K M +
Sbjct: 189 NILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLT 248

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           +G   D  TY+ LL G+ KQG   +  R+F  M++  + PN++ Y+ LID   K    KE
Sbjct: 249 NGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKE 308

Query: 493 AMQIFREFKQAGLKADV 509
           A ++F E    GL+ ++
Sbjct: 309 ARKLFSELFVQGLQPNM 325


>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
 gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
          Length = 495

 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 180/369 (48%), Gaps = 9/369 (2%)

Query: 199 MISILGRLGKVDLAKNIFE-TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           +I +L  +    LA  +F+  A  E + +TV+ ++A ++A  + G+  +A  +F+ M   
Sbjct: 7   VIHVLENIKSPKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYK 66

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              PN+ TY  V+   C     D    +E+  DM    + P     N L++   + G  +
Sbjct: 67  ECLPNIYTYGIVLRGLCDDAKTD--AALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVD 124

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AA  L+  +       D  +YN L   +CK  Q+D A  +  EM    + P+++TY+ ++
Sbjct: 125 AAYELYKRLSDE-CSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLL 183

Query: 377 DGYAKAGRLDDALNMFSEM----KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
            GY +AGR++ A+ +  EM    K   +  D  SYNTV+S + K  +   A  V + M  
Sbjct: 184 YGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIK 243

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           SG   + VT+N LL G    GK DE   MFE M      P  +TY+ LI  +++     +
Sbjct: 244 SGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDK 303

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A   F +  + G++ +V  Y+ALI  LC    VE A+ +L  M+  G  PNVVTY  +I 
Sbjct: 304 ANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIG 363

Query: 553 AFGRSATTE 561
           A  +    E
Sbjct: 364 ALCKGGQIE 372



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 167/368 (45%), Gaps = 21/368 (5%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN------SMKRYNLK 260
            K D A  + +   ++    T +  + L+S   ++G    A  ++       S+ R  + 
Sbjct: 86  AKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDR--IS 143

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
            N++TY      C    +D    + +F +M  N V P  +T+N LL    R G  E A  
Sbjct: 144 YNMLTYGL----CKADQID--RALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMT 197

Query: 321 LFNEMVH--RGID--QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           L  EM+   +G D   D+++YNT++   CK  Q+  A  ++  M     SPNVVT++T++
Sbjct: 198 LLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLL 257

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG    G+LD+A  MF  M         V+Y  +++ +A+  R ++A     +M   G+ 
Sbjct: 258 DGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVE 317

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +  TY AL+GG     K ++   + ++M +    PN++TY+ +I    KGG  + A ++
Sbjct: 318 PNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKL 377

Query: 497 FREF---KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           F +    + A  K D   YS +I  LC+      A      M +  +      Y ++ D 
Sbjct: 378 FNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADG 437

Query: 554 FGRSATTE 561
                 TE
Sbjct: 438 LELVQETE 445



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/265 (20%), Positives = 109/265 (41%), Gaps = 30/265 (11%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +YN  L+   K G   +A  +  +M       +  TY  +L G     K D    + + M
Sbjct: 39  TYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDM 98

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           ++  ++P     + L+    K G    A ++++         D + Y+ L   LCK   +
Sbjct: 99  ESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDE-CSLDRISYNMLTYGLCKADQI 157

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           + A+++  EM +  + P+++TYN ++  + R+   E  +  +E  +  +K S        
Sbjct: 158 DRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGS-------- 209

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKIKPN 644
               DV     + N +I  F                C+ +++     V ++M K    PN
Sbjct: 210 ----DVVPDMYSYNTVISGF----------------CKARQLPTARYVLRRMIKSGCSPN 249

Query: 645 VVTFSAILNACSRCNSFEDASMLLE 669
           VVTF+ +L+        ++A+ + E
Sbjct: 250 VVTFNTLLDGLCLTGKLDEANAMFE 274



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 12/207 (5%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +L++     C  +  TF  LL  L   G+  +A   F + V+R    N +    +  + I
Sbjct: 237 VLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVER----NCEPTAVTYTVLI 292

Query: 203 LG--RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
            G  R  ++D A + F   L  G    VY ++ALI     +   ++A+ +   M     +
Sbjct: 293 TGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGRE 352

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN---GVQPDRITFNSLLAVCSRGGLWEA 317
           PN+VTY  VI A  KGG   +   ++F+D + +     +PD   +++++    R   +  
Sbjct: 353 PNVVTYTRVIGALCKGG-QIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLE 411

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           A   F  MV   +      Y  + D +
Sbjct: 412 AYEYFLRMVESKLVAKPHIYKAMADGL 438


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 195/379 (51%), Gaps = 5/379 (1%)

Query: 180 AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYG 239
           A  V R  R        +A++  L +  +   A  +F+  L  G   +V  ++ LI+A  
Sbjct: 138 ALYVFRRLRTLPALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACR 197

Query: 240 RSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPD 298
             G   +A  V++ M    + PN+VTY  +I A C +G +       +FD M   G+QP+
Sbjct: 198 FQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAE--RLFDAMKEAGMQPN 255

Query: 299 RITFNSLLAV-CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIM 357
           + T+N L++  C R  +  +A  L+ E++  G++ +   + TL+D  CK  +   A  + 
Sbjct: 256 QYTYNVLMSGHCQRDDV-NSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMF 314

Query: 358 AEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
            EMP   ++P V  Y++++DG  ++G   +AL ++ EM  LG+  D  + + V+      
Sbjct: 315 LEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDG 374

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           G+   A    + ++  G+  +A  YNAL+  Y + G  +E      +M    + PN+++Y
Sbjct: 375 GQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSY 434

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           S+LID +SK G  + AM I+ E    G++ +VV Y+ALI    KNG +++A  L  EM +
Sbjct: 435 SSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIE 494

Query: 538 EGIRPNVVTYNSIIDAFGR 556
            GI PN +T + ++D   R
Sbjct: 495 NGISPNAITVSVLVDGLCR 513



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 190/358 (53%), Gaps = 13/358 (3%)

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL 306
           A  +F+ M R  L P++VTYN +I+AC   G   K   E++D M+   + P+ +T+ +++
Sbjct: 170 AWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAK-AQEVWDQMVAQQIDPNVVTYTTMI 228

Query: 307 -AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
            A+C  G + +A R LF+ M   G+  + +TYN L+   C+   ++ A  +  E+    +
Sbjct: 229 CALCEEGCIGDAER-LFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGL 287

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           +PN V ++T+IDG+ KA R  +A  MF EM   G+      YN+++    + G  +EAL 
Sbjct: 288 NPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALA 347

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           + +EM   G+  D  T + ++ G    G+     R  + ++ D V+ N   Y+ LID Y 
Sbjct: 348 LYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYC 407

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           + G  +EA+       + G++ +VV YS+LID   K G ++ A+++  EM  +GI PNVV
Sbjct: 408 RIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVV 467

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------LDAMCSQDDKDVQEAGR 596
           TY ++I    ++   +     + +++ +   S N       +D +C ++   VQEA R
Sbjct: 468 TYTALIHGHAKNGGIDAAF-RLHKEMIENGISPNAITVSVLVDGLCREN--RVQEAVR 522



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 177/372 (47%), Gaps = 18/372 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI  L   G +  A+ +F+     G     Y ++ L+S + +      A+ ++  + +
Sbjct: 225 TTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLK 284

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L PN V +  +ID   K    F     +F +M R GV P    +NSL+    R G  +
Sbjct: 285 SGLNPNAVIFTTLIDGFCKAK-RFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQ 343

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L+ EM   G+  D FT + ++  +C G QM +A   +  +    ++ N   Y+ +I
Sbjct: 344 EALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALI 403

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           D Y + G L++AL   + M  +GI  + VSY++++  ++K G+ + A+ +  EM + GI 
Sbjct: 404 DEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIE 463

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            + VTY AL+ G+ K G  D   R+ ++M  + +SPN +T S L+D   +    +EA++ 
Sbjct: 464 PNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRF 523

Query: 497 FREF-----------------KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
             E+                 ++  L  + V+Y  LI  L  +G    A  L   M K G
Sbjct: 524 VMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSG 583

Query: 540 IRPNVVTYNSII 551
           + P+  TY  +I
Sbjct: 584 MIPDSFTYTLLI 595



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 172/352 (48%), Gaps = 18/352 (5%)

Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
           V+ A  +++  L  G       F+ LI  + ++    EA  +F  M R+ + P +  YN+
Sbjct: 272 VNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNS 331

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
           ++D   + G + +  + ++ +M R G+ PD  T + ++     GG    A      +   
Sbjct: 332 LMDGAFRSG-NAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQED 390

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           G++ +   YN L+D  C+   ++ A      M    I PNVV+YS++IDG++K G++  A
Sbjct: 391 GVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIA 450

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           + +++EM   GI  + V+Y  ++  +AK G  + A  + KEM  +GI  +A+T + L+ G
Sbjct: 451 MAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDG 510

Query: 449 YGKQGKYDEVRRMFEQ-----------------MKADCVSPNLLTYSTLIDVYSKGGLYK 491
             ++ +  E  R   +                 ++ +C+ PN + Y TLI      G + 
Sbjct: 511 LCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHC 570

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
           EA ++F   +++G+  D   Y+ LI   C  G V +A+ L  +M K G++P 
Sbjct: 571 EAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPT 622



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 206/442 (46%), Gaps = 70/442 (15%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
           A   L+ A  + G   EA+ VF   +R    P L   NAV+D                  
Sbjct: 121 ALGVLVIALSQMGLLDEALYVF---RRLRTLPALPACNAVLDG----------------- 160

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
            L    +P              G  WE    LF+EM+ RG+   + TYNTL++A      
Sbjct: 161 -LVKARRP--------------GCAWE----LFDEMLRRGLVPSVVTYNTLINACRFQGT 201

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
           +  A E+  +M A+ I PNVVTY+TMI    + G + DA  +F  MK  G+  ++ +YN 
Sbjct: 202 VAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNV 261

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           ++S + +      A+++ +E+  SG+  +AV +  L+ G+ K  ++ E + MF +M    
Sbjct: 262 LMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFG 321

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           V+P +  Y++L+D   + G  +EA+ +++E  + GL  D    S ++  LC  G +  A 
Sbjct: 322 VAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVAD 381

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
             L  + ++G+  N   YN++ID +       C + ++E  L          A C++   
Sbjct: 382 RFLQGVQEDGVNLNAAAYNALIDEY-------CRIGNLEEAL----------ATCTR--- 421

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
            + E G   N  +  +  L+   + +GK +          + ++ +M    I+PNVVT++
Sbjct: 422 -MTEVGIEPN--VVSYSSLIDGHSKRGKMQ--------IAMAIYTEMVAKGIEPNVVTYT 470

Query: 650 AILNACSRCNSFEDASMLLEEL 671
           A+++  ++    + A  L +E+
Sbjct: 471 ALIHGHAKNGGIDAAFRLHKEM 492



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 23/254 (9%)

Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
           +E+  N      +A+I    R+G ++ A          G    V ++S+LI  + + G  
Sbjct: 388 QEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKM 447

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGK-GGVDFKHVVEIFDDMLRNGVQPDRITFN 303
           Q A++++  M    ++PN+VTY A+I    K GG+D      +  +M+ NG+ P+ IT +
Sbjct: 448 QIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGID--AAFRLHKEMIENGISPNAITVS 505

Query: 304 SLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
            L+  +C    + EA R +      +  D      N  ++  C                 
Sbjct: 506 VLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEEC----------------- 548

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
             + PN V Y T+I G    G+  +A  +FS M+  G+  D  +Y  ++     LG    
Sbjct: 549 --LIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLN 606

Query: 423 ALLVCKEMESSGIR 436
           A+++  +M   G++
Sbjct: 607 AMMLYADMMKIGVK 620


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 188/383 (49%), Gaps = 36/383 (9%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GKV  A +  +  L  G+    +++  LI+   + G  + A+ +   +    +K N+V Y
Sbjct: 152 GKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMY 211

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N +ID+  K  +      E++  M+   + PD +TF++L+      G  E A  LF EMV
Sbjct: 212 NTIIDSLCKHKLVID-AYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMV 270

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS------------- 373
            + I+ D +T+N L+DA+CK   +  A  ++  M  + + PNVVTYS             
Sbjct: 271 LKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVN 330

Query: 374 ----------------------TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
                                 TMI+G+ K   +D+AL++F++M+F GI  D+V+YN+++
Sbjct: 331 KAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLI 390

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
               K GR   A  +  EM  +G   +  TYN L+    K    D+   + +++K   + 
Sbjct: 391 DGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQ 450

Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL 531
           P++ T++ LI    K G  K A  +F++    G   +   Y+ +++ LCK GL + A +L
Sbjct: 451 PDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEAL 510

Query: 532 LDEMTKEGIRPNVVTYNSIIDAF 554
           L +M   GI P+ VTY ++I A 
Sbjct: 511 LSKMDDNGIIPDAVTYETLIQAL 533



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 221/470 (47%), Gaps = 52/470 (11%)

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
           AIS+   ++ + + P++ T+N +I+  C    ++F     +   +L+ G +PD ITFN+L
Sbjct: 87  AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNF--AFSMMAKILKMGYEPDTITFNTL 144

Query: 306 L-AVCSRGGLWEAAR------------------NLFNEMVHRG----------------I 330
           +  +C  G + EA                     L N +   G                +
Sbjct: 145 IKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLV 204

Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
             ++  YNT++D++CK   +  A+E+ ++M AK ISP+VVT+S +I G+   G+L++A  
Sbjct: 205 KINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFG 264

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +F EM    I  D  ++N ++    K G  + A  +   M   G+  + VTY++L+ GY 
Sbjct: 265 LFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYC 324

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
              + ++ + +   +     +PN  +Y T+I+ + K  +  EA+ +F + +  G+  D V
Sbjct: 325 LVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKV 384

Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE-- 568
            Y++LID LCK+G +  A  L+DEM   G   N+ TYN +IDA  ++   +  +  V+  
Sbjct: 385 TYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKI 444

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
           +D G Q +    + +       + + GR  N    VF  L+++               LC
Sbjct: 445 KDQGIQPDMYTFNILIY----GLCKVGRLKNA-QDVFQDLLSKGYSVNAWTYNIMVNGLC 499

Query: 629 ILGVF-------QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             G+F        KM    I P+ VT+  ++ A    +  E A  LL E+
Sbjct: 500 KEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREM 549



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 131/530 (24%), Positives = 236/530 (44%), Gaps = 83/530 (15%)

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLA--VCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           +D  +VV  F+ +LR       I FN +L   V S    +  A +L   +   GI  DIF
Sbjct: 45  IDVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIF 104

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           T+N L++  C  A+M+ AF +MA++      P+ +T++T+I G    G++ +AL+    +
Sbjct: 105 TFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHV 164

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
             LG  LD+ SY T+++   K+G    AL + ++++   ++ + V YN ++    K    
Sbjct: 165 LALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLV 224

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            +   ++ QM A  +SP+++T+S LI  +   G  +EA  +FRE     +  D   ++ L
Sbjct: 225 IDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNIL 284

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER------ 569
           +DALCK G ++ A ++L  M KEG+ PNVVTY+S++D +       C V+ V +      
Sbjct: 285 VDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGY-------CLVNQVNKAKHVLN 337

Query: 570 DLGKQKESANLDAMCSQDD---------------KDVQEAGRTDNQI------------- 601
            + +   + N  + C+  +                D+Q  G   +++             
Sbjct: 338 TISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSG 397

Query: 602 -IKVFGQLVAEKAGQGKKEN----RCRQEILC-------ILGVFQKMHKLKIKPNVVTFS 649
            I    +LV E    G+  N     C  + LC        + + +K+    I+P++ TF+
Sbjct: 398 RISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFN 457

Query: 650 AILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQAL--------SLF 701
            ++    +    ++A  + ++L             L  GY  N W   +         LF
Sbjct: 458 ILIYGLCKVGRLKNAQDVFQDL-------------LSKGYSVNAWTYNIMVNGLCKEGLF 504

Query: 702 DEVKLMDSST-------ASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQV 744
           DE + + S          +  Y  L   L+H  +   A+ ++ E   R V
Sbjct: 505 DEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDV 554



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 160/305 (52%), Gaps = 5/305 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           SA+I     +G+++ A  +F   + +      Y F+ L+ A  + G  + A ++   M +
Sbjct: 247 SALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMK 306

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVD-FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
             + PN+VTY++++D  C    V+  KHV+     M   G  P+  ++ +++    +  +
Sbjct: 307 EGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQM---GAAPNAHSYCTMINGFCKIKM 363

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            + A +LFN+M  +GI  D  TYN+L+D +CK  ++  A+E++ EM       N+ TY+ 
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNC 423

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +ID   K   +D A+ +  ++K  GI  D  ++N ++    K+GR + A  V +++ S G
Sbjct: 424 LIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKG 483

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
              +A TYN ++ G  K+G +DE   +  +M  + + P+ +TY TLI         ++A 
Sbjct: 484 YSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAE 543

Query: 495 QIFRE 499
           ++ RE
Sbjct: 544 KLLRE 548



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 130/262 (49%), Gaps = 36/262 (13%)

Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
           + +V+ AK++  T    G     +++  +I+ + +     EA+S+FN M+   + P+ VT
Sbjct: 326 VNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVT 385

Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           YN++ID   K G    +  E+ D+M  NG QP                            
Sbjct: 386 YNSLIDGLCKSG-RISYAWELVDEMHDNG-QP---------------------------- 415

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
                  +IFTYN L+DA+CK   +D A  ++ ++  + I P++ T++ +I G  K GRL
Sbjct: 416 ------ANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRL 469

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
            +A ++F ++   G  ++  +YN +++   K G F+EA  +  +M+ +GI  DAVTY  L
Sbjct: 470 KNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETL 529

Query: 446 LGGYGKQGKYDEVRRMFEQMKA 467
           +     + + ++  ++  +M A
Sbjct: 530 IQALFHKDENEKAEKLLREMIA 551



 Score = 39.7 bits (91), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 22/92 (23%), Positives = 50/92 (54%), Gaps = 2/92 (2%)

Query: 183 VKREERKNDQGKLASAMISILG--RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
           VK+ + +  Q  + +  I I G  ++G++  A+++F+  L++GY    + ++ +++   +
Sbjct: 441 VKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCK 500

Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
            G   EA ++ + M    + P+ VTY  +I A
Sbjct: 501 EGLFDEAEALLSKMDDNGIIPDAVTYETLIQA 532


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 130/538 (24%), Positives = 239/538 (44%), Gaps = 43/538 (7%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I +L +    D    I E   N         FS LI+AY +SG  ++A+  F  MK + 
Sbjct: 102 VIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFG 161

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
            KP++ TYN+++    +  V F   + +++ ML+    P+R TF  LL    + G  + A
Sbjct: 162 CKPDVFTYNSILHVMVQKEV-FLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDA 220

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +F+EM  +GI  +   Y  +L  +C+  + D    ++  M      P+ +T + ++DG
Sbjct: 221 LKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDG 280

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           + K G++D+A  +    +  G  L    Y++++    +  R++E    C++M  +GI  D
Sbjct: 281 FCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPD 340

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            V Y  L+ G+ + G  D    M   M    +SP+   Y+ LI  +   GL  +A  +  
Sbjct: 341 VVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQL 400

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E  +         Y+ LI  +C+NGL++ A  + ++M   G  P+++T+N++ID   ++ 
Sbjct: 401 EISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAG 460

Query: 559 TTECTVDDVERDLGKQKE---SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
             E       R L  + E   + +L    SQ    V +       +              
Sbjct: 461 ELE-----EARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMV-------------- 501

Query: 616 GKKENRCRQEILCILGVFQKMHKLKIK-------PNVVTFSAILNACSRCNSFEDASMLL 668
                    E LC  G+  K +KL ++       P+++T++ ++N   +  +   A  L 
Sbjct: 502 ---------ERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLF 552

Query: 669 EELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLW 724
            EL+L  +    V +G L+   +R +    A  + D++     + +SA Y  L  M W
Sbjct: 553 RELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCL--MTW 608



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 201/413 (48%), Gaps = 32/413 (7%)

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
           VT+N VID   K    F    +I +++  + +Q    TF+ L+A  ++ G+ E A   F 
Sbjct: 97  VTHNLVIDMLAKDD-GFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFG 155

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
           +M   G   D+FTYN++L  + +     LA  +  +M   N +PN  T+  +++G  K G
Sbjct: 156 KMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNG 215

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           + DDAL MF EM   GI  + + Y  +LS   +  R ++   +   M+ SG   D++T N
Sbjct: 216 KTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCN 275

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           ALL G+ K G+ DE   + +  + +     +  YS+LID   +   Y E  +  R+  +A
Sbjct: 276 ALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKA 335

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
           G++ DVVLY+ LI   C+ G+V+ A+++L++MT+ G+ P+   YN++I  F       C 
Sbjct: 336 GIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGF-------CD 388

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
           V  +++    Q E +  D   +     +   G   N ++                 +  R
Sbjct: 389 VGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLL-----------------DEAR 431

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
           Q       +F +M  L   P+++TF+A+++   +    E+A  L  ++ +  N
Sbjct: 432 Q-------IFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKN 477



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 197/425 (46%), Gaps = 55/425 (12%)

Query: 186 EERKNDQGKLA----SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
           EE KN   ++     S +I+   + G  + A   F    + G    V+ +++++    + 
Sbjct: 120 EELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQK 179

Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
                A++V+N M + N  PN  T+  +++  C  G  D    +++FD+M + G+ P+ +
Sbjct: 180 EVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTD--DALKMFDEMTQKGIPPNTM 237

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA-- 358
            +  +L+   +    +    L N M   G   D  T N LLD  CK  Q+D AF ++   
Sbjct: 238 IYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLF 297

Query: 359 ---------------------------------EMPAKNISPNVVTYSTMIDGYAKAGRL 385
                                            +M    I P+VV Y+ +I G+ + G +
Sbjct: 298 EKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMV 357

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           D ALNM ++M   G+  D   YN ++  +  +G  ++A  +  E+  +     + TY  L
Sbjct: 358 DYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTIL 417

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE------ 499
           + G  + G  DE R++F QM+    SP+++T++ LID   K G  +EA  +F +      
Sbjct: 418 ICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKN 477

Query: 500 ---FKQAGLKADVVLYSA----LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
              F +    AD V+ +A    +++ LC++GL+  A  LL ++   G+ P+++TYN +I+
Sbjct: 478 PSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLIN 537

Query: 553 AFGRS 557
            F ++
Sbjct: 538 GFCKA 542



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/392 (22%), Positives = 172/392 (43%), Gaps = 48/392 (12%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           L + +I     +G VD A N+       G     Y ++ALI  +   G   +A S+   +
Sbjct: 343 LYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEI 402

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
            + +  P   TY  +I    + G+      +IF+ M   G  P  +TFN+L+    + G 
Sbjct: 403 SKNDCFPTSCTYTILICGMCRNGL-LDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGE 461

Query: 315 WEAARNLFNEM-----------VHRGIDQ--DIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
            E AR+LF +M           + +G D+  D  +  T+++ +C+   +  A++++ ++ 
Sbjct: 462 LEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLA 521

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
              + P+++TY+ +I+G+ KA  ++ A  +F E++  G   D V+Y T++  + ++ R E
Sbjct: 522 DSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREE 581

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY------------------DEVRRMFE 463
           +A  V  +M  +G    +  Y  L+    ++GK                   DE  ++ E
Sbjct: 582 DAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAE 641

Query: 464 ----------------QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
                           +M     +  +  Y+  +    +    +EA++IF   K+  +  
Sbjct: 642 EHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDV 701

Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +      LI+ LCK+G +E AV +     ++G
Sbjct: 702 NPPSCVMLINGLCKDGNLEMAVDIFLYTLEKG 733



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 5/262 (1%)

Query: 164 RELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEG 223
           R L  + E  K    F    +  +R  D   L + M+  L   G +  A  +     + G
Sbjct: 466 RHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQT-MVERLCESGLILKAYKLLMQLADSG 524

Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH- 282
               +  ++ LI+ + ++     A  +F  ++     P+ VTY  +ID  G   VD +  
Sbjct: 525 VVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLID--GFHRVDREED 582

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
              + D M++NG  P    +  L+    R G    A +L+ + +     Q+  T     +
Sbjct: 583 AFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEE 642

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
              KG +++ A   + EM  K  +  +  Y+  + G  +A R ++AL +F  +K   + +
Sbjct: 643 HFEKG-ELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDV 701

Query: 403 DRVSYNTVLSIYAKLGRFEEAL 424
           +  S   +++   K G  E A+
Sbjct: 702 NPPSCVMLINGLCKDGNLEMAV 723


>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
 gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
 gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
          Length = 410

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 193/395 (48%), Gaps = 2/395 (0%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           ++R L    E   A+   A   K  +   D     +A++ +  + G V  A+ +F+    
Sbjct: 8   VVRRLCVAAEVRSALAVLARGTKSGDAALDVAA-CTALVHVCCQSGDVAEARRVFDVMPR 66

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
            G       ++ALI+ Y   G+ +   ++F  M+R  ++PNL TYN +I    + G +FK
Sbjct: 67  LGVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTG-EFK 125

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
               +FD+M   GV  + +++N L+A   R    + A  LF  M   GI   I T+N L+
Sbjct: 126 SARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLI 185

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           D   K  +M  A     +M A  + P+VVTY+ +I G+ +   +  A+  F +MK  G+ 
Sbjct: 186 DGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLA 245

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
             +V+Y  +++ +AK    + A ++  EME +G+  D  +Y  LL     +GK    R++
Sbjct: 246 PTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKL 305

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F+ M    V PN + Y  +I  Y + G   +A+++  E ++ GL  +V  Y   I  LC 
Sbjct: 306 FQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCN 365

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            G  + A +L+D+M   G++ +      ++DA  R
Sbjct: 366 EGKCQEAEALIDDMEHAGLQTSETICRILLDAKAR 400



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 184/347 (53%), Gaps = 10/347 (2%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC---GKGGVDFKHVV 284
           V A +AL+    +SG   EA  VF+ M R  + PN VTY A+I+     G   + F    
Sbjct: 38  VAACTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFA--- 94

Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
            +F +M R+GV+P+  T+N L+    R G +++AR LF+EM  +G+  ++ +YN L+  +
Sbjct: 95  -LFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGL 153

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C+ +++  A ++   M  + I P++VT++ +IDGY KAG++ +AL+ F++MK  G+    
Sbjct: 154 CRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSV 213

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           V+YN ++  + ++     A+    +M+  G+    VTY  L+  + K+ + D    M  +
Sbjct: 214 VTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSE 273

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M+   +  ++ +Y  L+      G    A ++F+     G+K + VLY  +I    + G 
Sbjct: 274 MEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGS 333

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVE 568
              A+ L+ EM K G+ PNV +Y   I      G+    E  +DD+E
Sbjct: 334 SYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDME 380



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 160/342 (46%), Gaps = 35/342 (10%)

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D+     L+   C+   +  A  +   MP   ++PN VTY+ +I+GY   G  +    +F
Sbjct: 37  DVAACTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALF 96

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           +EM+  G+  +  +YN ++  + + G F+ A L+  EM   G+  + V+YN L+ G  + 
Sbjct: 97  AEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRH 156

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
            K  +  ++FE M+ + + P+++T++ LID Y K G    A+  F + K AGL   VV Y
Sbjct: 157 SKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTY 216

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERD-- 570
           + LI   C+   +  AV    +M + G+ P  VTY  +I AF +        ++++R   
Sbjct: 217 NELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKE-------NEMDRAFM 269

Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
           +  + E A L+        DVQ            +G L+     +GK        ++   
Sbjct: 270 MLSEMEKAGLEV-------DVQS-----------YGVLLHALCMEGK--------MMHAR 303

Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            +FQ M    +KPN V +  ++    R  S   A  L+ E+R
Sbjct: 304 KLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMR 345



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 167/367 (45%), Gaps = 42/367 (11%)

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
            LD  +   ++ +  + G   EA  V   M   G+  + VTY AL+ GY  +G  +    
Sbjct: 35  ALDVAACTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFA 94

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F +M+ D V PNL TY+ LI  + + G +K A  +F E    G+  +VV Y+ LI  LC
Sbjct: 95  LFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLC 154

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           ++  ++ AV L + M +EGIRP++VT+N +ID +G++      +         Q ++A L
Sbjct: 155 RHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANAL-----HFFNQMKAAGL 209

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKL 639
                        +  T N++I  F                CR ++I   +  F  M + 
Sbjct: 210 -----------PPSVVTYNELICGF----------------CRVRDIARAVRAFLDMKER 242

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRL----FDNQVYGV-AHGLLMGYRDNIW 694
            + P  VT++ ++ A ++ N  + A M+L E+       D Q YGV  H L M   +   
Sbjct: 243 GLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCM---EGKM 299

Query: 695 VQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
           + A  LF  + L      S  Y+ +       G    A  +++E ++  +  NV S  CL
Sbjct: 300 MHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVAS-YCL 358

Query: 755 DLHLMSS 761
            + L+ +
Sbjct: 359 TIRLLCN 365



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 38/255 (14%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+ L R  K+  A  +FE    EG   ++  F+ LI  YG++G    A+  FN MK   
Sbjct: 149 LIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAG 208

Query: 259 LKPNLVTYNAVIDACGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           L P++VTYN +I  CG   V D    V  F DM   G+ P ++T+  L+A  ++    + 
Sbjct: 209 LPPSVVTYNELI--CGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDR 266

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM----------DL--------------- 352
           A  + +EM   G++ D+ +Y  LL A+C   +M          DL               
Sbjct: 267 AFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIY 326

Query: 353 ----------AFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
                     A  ++ EM    + PNV +Y   I      G+  +A  +  +M+  G+  
Sbjct: 327 GYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDMEHAGLQT 386

Query: 403 DRVSYNTVLSIYAKL 417
                  +L   A+L
Sbjct: 387 SETICRILLDAKARL 401


>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
 gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
          Length = 495

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 180/369 (48%), Gaps = 9/369 (2%)

Query: 199 MISILGRLGKVDLAKNIFE-TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           +I +L  +    LA  +F+  A  E + +TV+ ++A ++A  + G+  +A  +F+ M   
Sbjct: 7   VIHVLENIKSPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYK 66

Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              PN+ TY  V+   C     D    +E+  DM    + P     N L++   + G  +
Sbjct: 67  ECLPNIYTYGIVLRGLCDDAKTD--AALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVD 124

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           AA  L+  +       D  +YN L   +CK  Q+D A  +  EM    + P+++TY+ ++
Sbjct: 125 AAYELYKRLSDE-CSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLL 183

Query: 377 DGYAKAGRLDDALNMFSEM----KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
            GY +AGR++ A+ +  EM    K   +  D  SYNTV+S + K  +   A  V + M  
Sbjct: 184 YGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIK 243

Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
           SG   + VT+N LL G    GK DE   MFE M      P  +TY+ LI  +++     +
Sbjct: 244 SGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDK 303

Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
           A   F +  + G++ +V  Y+ALI  LC    VE A+ +L  M+  G  PNVVTY  +I 
Sbjct: 304 ANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIG 363

Query: 553 AFGRSATTE 561
           A  +    E
Sbjct: 364 ALCKGGQIE 372



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 167/368 (45%), Gaps = 21/368 (5%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN------SMKRYNLK 260
            K D A  + +   ++    T +  + L+S   ++G    A  ++       S+ R  + 
Sbjct: 86  AKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDR--IS 143

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
            N++TY      C    +D    + +F +M  N V P  +T+N LL    R G  E A  
Sbjct: 144 YNMLTYGL----CKADQID--RALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMT 197

Query: 321 LFNEMVH--RGID--QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
           L  EM+   +G D   D+++YNT++   CK  Q+  A  ++  M     SPNVVT++T++
Sbjct: 198 LLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLL 257

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           DG    G+LD+A  MF  M         V+Y  +++ +A+  R ++A     +M   G+ 
Sbjct: 258 DGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVE 317

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +  TY AL+GG     K ++   + ++M +    PN++TY+ +I    KGG  + A ++
Sbjct: 318 PNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKL 377

Query: 497 FREF---KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
           F +    + A  K D   YS ++  LC+      A      M +  +      Y ++ D 
Sbjct: 378 FNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADG 437

Query: 554 FGRSATTE 561
                 TE
Sbjct: 438 LELVQETE 445



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/265 (20%), Positives = 109/265 (41%), Gaps = 30/265 (11%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +YN  L+   K G   +A  +  +M       +  TY  +L G     K D    + + M
Sbjct: 39  TYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDM 98

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           ++  ++P     + L+    K G    A ++++         D + Y+ L   LCK   +
Sbjct: 99  ESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDE-CSLDRISYNMLTYGLCKADQI 157

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           + A+++  EM +  + P+++TYN ++  + R+   E  +  +E  +  +K S        
Sbjct: 158 DRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGS-------- 209

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR-QEILCILGVFQKMHKLKIKPN 644
               DV     + N +I  F                C+ +++     V ++M K    PN
Sbjct: 210 ----DVVPDMYSYNTVISGF----------------CKARQLPTARYVLRRMIKSGCSPN 249

Query: 645 VVTFSAILNACSRCNSFEDASMLLE 669
           VVTF+ +L+        ++A+ + E
Sbjct: 250 VVTFNTLLDGLCLTGKLDEANAMFE 274



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 12/207 (5%)

Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
           +L++     C  +  TF  LL  L   G+  +A   F + V+R    N +    +  + I
Sbjct: 237 VLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVER----NCEPTAVTYTVLI 292

Query: 203 LG--RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLK 260
            G  R  ++D A + F   L  G    VY ++ALI     +   ++A+ +   M     +
Sbjct: 293 TGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGRE 352

Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN---GVQPDRITFNSLLAVCSRGGLWEA 317
           PN+VTY  VI A  KGG   +   ++F+D + +     +PD   +++++    R   +  
Sbjct: 353 PNVVTYTRVIGALCKGG-QIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLE 411

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           A   F  MV   +      Y  + D +
Sbjct: 412 AYEYFLRMVESKLVAKPHIYKAMADGL 438


>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 942

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 187/368 (50%), Gaps = 4/368 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I++  ++GK+  A  +      EG  + +  +S +I+ + +      A +VF  M +  
Sbjct: 491 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 550

Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
           +KP+++ YN +I A CG G +D    ++   +M +   +P   TF  ++   ++ G    
Sbjct: 551 MKPDVILYNNIIAAFCGMGNMD--RAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRR 608

Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
           +  +F+ M   G    + T+N L++ + +  QM+ A EI+ EM    +S N  TY+ ++ 
Sbjct: 609 SLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 668

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           GYA  G    A   F+ ++  G+ +D  +Y  +L    K GR + AL V KEM +  I +
Sbjct: 669 GYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPR 728

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           ++  YN L+ G+ ++G   E   + +QMK + V P++ TY++ I   SK G    A Q  
Sbjct: 729 NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTI 788

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-FGR 556
            E +  G+K ++  Y+ LI    +  L E A+S  +EM   G++P+   Y+ ++ +   R
Sbjct: 789 EEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSR 848

Query: 557 SATTECTV 564
           ++  E  +
Sbjct: 849 ASIAEAYI 856



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/542 (23%), Positives = 240/542 (44%), Gaps = 29/542 (5%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           M+   GR G +  A+  FE     G   T   +++LI AY      +EA+S    MK   
Sbjct: 316 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMKEEG 375

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
           ++ +LVTY+ ++    K G + +     FD+  R     +   +  ++    +    E A
Sbjct: 376 IEMSLVTYSVIVGGFSKAG-NAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERA 434

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             L  EM   GID  I  Y+T++D     A       +   +     +P VVTY  +I+ 
Sbjct: 435 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINL 494

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           Y K G++  AL +   MK  G+  +  +Y+ +++ + KL  +  A  V ++M   G++ D
Sbjct: 495 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 554

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            + YN ++  +   G  D   +  ++M+     P   T+  +I+ ++K G  + ++++F 
Sbjct: 555 VILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFD 614

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
             ++ G    V  ++ALI+ L +   +E AV +LDEMT  G+  N  TY  I+  +    
Sbjct: 615 MMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 674

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQD-DKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
            T    +   R    Q E   +D    +   K   ++GR  + +      +  E + +  
Sbjct: 675 DTGKAFEYFTR---LQNEGLEVDIFTYEALLKACCKSGRMQSAL-----AVTKEMSARNI 726

Query: 618 KENRCRQEILC-----------ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM 666
             N     IL               + Q+M K  +KP++ T+++ ++ACS+      A+ 
Sbjct: 727 PRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQ 786

Query: 667 LLEELRLF----DNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
            +EE+       + + Y     L+ G+ R ++  +ALS ++E+K +      A Y+ L  
Sbjct: 787 TIEEMEALGVKPNIKTYTT---LIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLT 843

Query: 722 ML 723
            L
Sbjct: 844 SL 845



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 187/397 (47%), Gaps = 35/397 (8%)

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
           G +++ V+  F+ + +    P R  F  ++    R G    AR  F  M  RGI      
Sbjct: 292 GDNWQAVISAFEKINK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 347

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           Y +L+ A   G  M+ A   + +M  + I  ++VTYS ++ G++KAG  + A + F E K
Sbjct: 348 YTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAK 407

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
            +   L+   Y  ++  + +    E A  + +EME  GI      Y+ ++ GY       
Sbjct: 408 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 467

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           +   +F+++K    +P ++TY  LI++Y+K G   +A+++ R  K+ G+K ++  YS +I
Sbjct: 468 KGLIVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI 527

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
           +   K     +A ++ ++M KEG++P+V+ YN+II AF       C + +++R +   KE
Sbjct: 528 NGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAF-------CGMGNMDRAIQTVKE 580

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
              L           +   RT   II  F      K+G  ++           L VF  M
Sbjct: 581 MQKLRH---------RPTTRTFMPIINGFA-----KSGDMRRS----------LEVFDMM 616

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
            +    P V TF+A++N        E A  +L+E+ L
Sbjct: 617 RRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTL 653



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/478 (22%), Positives = 205/478 (42%), Gaps = 33/478 (6%)

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           Q  IS F  +     KP+   +  ++   G+ G D     E F+ M   G+ P    + S
Sbjct: 296 QAVISAFEKIN----KPSRTEFGLMVKFYGRRG-DMHRARETFERMRARGITPTSRIYTS 350

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L+   + G   E A +   +M   GI+  + TY+ ++    K    + A     E    +
Sbjct: 351 LIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIH 410

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
            + N   Y  +I  + +   ++ A  +  EM+  GI      Y+T++  Y  +   ++ L
Sbjct: 411 KTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGL 470

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
           +V K ++  G     VTY  L+  Y K GK  +   +   MK + V  NL TYS +I+ +
Sbjct: 471 IVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 530

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
            K   +  A  +F +  + G+K DV+LY+ +I A C  G ++ A+  + EM K   RP  
Sbjct: 531 VKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTT 590

Query: 545 VTYNSIIDAFGRSATTECTVD--DVERDLGKQKESANLDAMCS------QDDKDVQ---- 592
            T+  II+ F +S     +++  D+ R  G        +A+ +      Q +K V+    
Sbjct: 591 RTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDE 650

Query: 593 --EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
              AG + N+    + +++   A  G                F ++    ++ ++ T+ A
Sbjct: 651 MTLAGVSANE--HTYTKIMQGYASVGDTGK--------AFEYFTRLQNEGLEVDIFTYEA 700

Query: 651 ILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM---GYRDNIWVQALSLFDEVK 705
           +L AC +    + A  + +E+   +       + +L+     R ++W +A  L  ++K
Sbjct: 701 LLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW-EAADLIQQMK 757


>gi|255661202|gb|ACU25770.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
          Length = 426

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 221/444 (49%), Gaps = 36/444 (8%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           Y +S LI+ +G+ G   +A+S    M+   +  +LV Y+ +I+   K   D+   + IF 
Sbjct: 10  YTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKL-CDYSRAISIFS 68

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            + R+G+ PD + +NS++ V  +  L+  AR L +EM   G+  D  +Y TLL    +  
Sbjct: 69  RLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLTMYVENQ 128

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           +   A  + +EM     S ++ T + MID Y + G   +A  +F  M+ +GI  + VSYN
Sbjct: 129 KFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVSYN 188

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T+L +Y     F EA+ + + M+   I ++ VTYN+++  YGK  ++++   + ++M+  
Sbjct: 189 TLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQEMQDR 248

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + PN +TYST+I ++ K G    A  +F++ + +G++ D VLY  +I A  + GLV  A
Sbjct: 249 GIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAYERAGLVAHA 308

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
             LL E+     RP+ +  ++ I     +              G+ +E+  +        
Sbjct: 309 KRLLQELK----RPDNIPRDTAIHILAGA--------------GRIEEATWV-------F 343

Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
           +   EAG   +  I VF +++   +   K  N        ++ VF KM  L   P+    
Sbjct: 344 RQAVEAGEVKD--ITVFERMINLFSKHKKYPN--------VVEVFDKMRGLGYFPHSNVI 393

Query: 649 SAILNACSRCNSFEDASMLLEELR 672
           + +LNA  + + F+ A+ +  E++
Sbjct: 394 ALVLNAYGKLHEFDKANSVYMEMQ 417



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 184/378 (48%), Gaps = 7/378 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+  G+ G  D A +  +    +     +  +S LI    +      AIS+F+ +KR
Sbjct: 13  STLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSRAISIFSRLKR 72

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             + P+LV YN++I+  GK  + F+    +  +M   GV PD +++ +LL +      + 
Sbjct: 73  SGIAPDLVAYNSMINVFGKAKL-FREARALVSEMRTAGVMPDTVSYCTLLTMYVENQKFL 131

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +LF+EM       D+ T N ++D   +      A ++   M    I PNVV+Y+T++
Sbjct: 132 EALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVSYNTLL 191

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
             Y  A    +A+++F  M+   I  + V+YN+++ IY K    E+A  + +EM+  GI 
Sbjct: 192 RVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQEMQDRGIE 251

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +A+TY+ ++  +GK GK D    +F++++   +  + + Y T+I  Y + GL   A ++
Sbjct: 252 PNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAYERAGLVAHAKRL 311

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            +E K    + D +     I  L   G +E A  +  +  + G   ++  +  +I+ F +
Sbjct: 312 LQELK----RPDNIPRDTAIHILAGAGRIEEATWVFRQAVEAGEVKDITVFERMINLFSK 367

Query: 557 SATTECTVD--DVERDLG 572
                  V+  D  R LG
Sbjct: 368 HKKYPNVVEVFDKMRGLG 385



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 195/402 (48%), Gaps = 9/402 (2%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           D YT+  L+   G  G +  A+         E+R      L S +I +  +L     A +
Sbjct: 8   DRYTYSTLITHFGKEGLFDDALSWLQ--KMEEDRVPGDLVLYSNLIELSRKLCDYSRAIS 65

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           IF      G    + A++++I+ +G++   +EA ++ + M+   + P+ V+Y  ++    
Sbjct: 66  IFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLTMYV 125

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           +    F   + +F +M       D  T N ++ V  + G+ + A  LF  M   GI+ ++
Sbjct: 126 ENQ-KFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNV 184

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            +YNTLL           A  +   M  KNI  NVVTY++M+  Y K    + A N+  E
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQE 244

Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
           M+  GI  + ++Y+T++SI+ K+G+ + A ++ +++  SGI  D V Y  ++  Y + G 
Sbjct: 245 MQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAYERAGL 304

Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
               +R+ +++K     P+ +   T I + +  G  +EA  +FR+  +AG   D+ ++  
Sbjct: 305 VAHAKRLLQELK----RPDNIPRDTAIHILAGAGRIEEATWVFRQAVEAGEVKDITVFER 360

Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           +I+   K+    + V + D+M   G  P+      +++A+G+
Sbjct: 361 MINLFSKHKKYPNVVEVFDKMRGLGYFPHSNVIALVLNAYGK 402



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 177/362 (48%), Gaps = 31/362 (8%)

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            R +  D +TY+TL+    K    D A   + +M    +  ++V YS +I+   K     
Sbjct: 2   ERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYS 61

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            A+++FS +K  GI  D V+YN++++++ K   F EA  +  EM ++G+  D V+Y  LL
Sbjct: 62  RAISIFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLL 121

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
             Y +  K+ E   +F +M+    S +L T + +IDVY + G+ KEA ++F   ++ G++
Sbjct: 122 TMYVENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIE 181

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
            +VV Y+ L+       L   A+ L   M ++ I  NVVTYNS++  +G++         
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTL-------- 233

Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
                  + E AN + +    D+ ++    T + II ++G++       GK +   R  +
Sbjct: 234 -------EHEKAN-NLIQEMQDRGIEPNAITYSTIISIWGKV-------GKLD---RAAM 275

Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
           L     FQK+    I+ + V +  ++ A  R      A  LL+EL+  DN     A  +L
Sbjct: 276 L-----FQKLRCSGIEIDQVLYQTMIVAYERAGLVAHAKRLLQELKRPDNIPRDTAIHIL 330

Query: 687 MG 688
            G
Sbjct: 331 AG 332



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 184/371 (49%), Gaps = 11/371 (2%)

Query: 171 EWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTV 228
           ++S+AI  F+    R +R      L +  +MI++ G+      A+ +       G     
Sbjct: 59  DYSRAISIFS----RLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDT 114

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
            ++  L++ Y  +    EA+S+F+ M+      +L T N +ID  G+ G+  K   ++F 
Sbjct: 115 VSYCTLLTMYVENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMA-KEADKLFW 173

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M + G++P+ +++N+LL V     L+  A +LF  M  + I+Q++ TYN+++    K  
Sbjct: 174 SMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTL 233

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           + + A  ++ EM  + I PN +TYST+I  + K G+LD A  +F +++  GI +D+V Y 
Sbjct: 234 EHEKANNLIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQ 293

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T++  Y + G    A  + +E++    R D +  +  +      G+ +E   +F Q    
Sbjct: 294 TMIVAYERAGLVAHAKRLLQELK----RPDNIPRDTAIHILAGAGRIEEATWVFRQAVEA 349

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
               ++  +  +I+++SK   Y   +++F + +  G      + + +++A  K    + A
Sbjct: 350 GEVKDITVFERMINLFSKHKKYPNVVEVFDKMRGLGYFPHSNVIALVLNAYGKLHEFDKA 409

Query: 529 VSLLDEMTKEG 539
            S+  EM  EG
Sbjct: 410 NSVYMEMQDEG 420



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 2/127 (1%)

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH-GLLMG 688
           + +F ++ +  I P++V +++++N   +   F +A  L+ E+R        V++  LL  
Sbjct: 64  ISIFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLTM 123

Query: 689 YRDNI-WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN 747
           Y +N  +++ALSLF E++ +  S      N + D+    G  + A  +    ++  +  N
Sbjct: 124 YVENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPN 183

Query: 748 VWSESCL 754
           V S + L
Sbjct: 184 VVSYNTL 190


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 182/333 (54%), Gaps = 1/333 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           VY+F  +I     +G  +++  +   ++ +   PN+V Y  +ID C K G + +   ++F
Sbjct: 163 VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG-EIEKAKDLF 221

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            +M + G+  +  T+  L+    + G+ +    ++ +M   G+  ++ TYN +++ +CK 
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKD 281

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +   AF++  EM  + +S N+VTY+T+I G  +  + ++A  +  +MK  GI  + ++Y
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITY 341

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           NT++  +  + +  +AL +C++++S G+    VTYN L+ G+ K+G      ++ ++M+ 
Sbjct: 342 NTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             + P+ +TY+ LID +++    ++A+Q+    ++ GL  DV  YS LI   C  G +  
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNE 461

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
           A  L   M ++   PN V YN+++  + +  ++
Sbjct: 462 ASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSS 494



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 179/334 (53%), Gaps = 1/334 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G+   V  ++ LI    + G  ++A  +F  M ++ L  N  TY  +I    K G+  K 
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIK-KQ 251

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             E+++ M  +GV P+  T+N ++    + G  + A  +F+EM  RG+  +I TYNTL+ 
Sbjct: 252 GFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            +C+  + + A E+M +M +  I+PN++TY+T+IDG+    +L  AL++  ++K  G+  
Sbjct: 312 GLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSP 371

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
             V+YN ++S + K G    A  V KEME  GI+   VTY  L+  + +    ++  ++ 
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
             M+   ++P++ TYS LI  +   G   EA ++F+   +   + + V+Y+ ++   CK 
Sbjct: 432 SSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKE 491

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           G    A+ L  EM ++ + PNV +Y  +I+   +
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCK 525



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 192/363 (52%), Gaps = 5/363 (1%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I    + G+++ AK++F      G     + ++ LI    ++G  ++   ++  M
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM 259

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           + + + PNL TYN V++   K G   K   ++FD+M   GV  + +T+N+L+    R   
Sbjct: 260 QEHGVFPNLHTYNCVMNQLCKDGRT-KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A  + ++M   GI+ ++ TYNTL+D  C   ++  A  +  ++ ++ +SP++VTY+ 
Sbjct: 319 ANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNI 378

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++ G+ K G    A  +  EM+  GI   +V+Y  ++  +A+    E+A+ +   ME  G
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELG 438

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  D  TY+ L+ G+  +G+ +E  R+F+ M      PN + Y+T++  Y K G    A+
Sbjct: 439 LTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRAL 498

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++FRE ++  L  +V  Y  +I+ LCK    + A  L+++M   GI P+    +SI++  
Sbjct: 499 RLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPS----DSILNLI 554

Query: 555 GRS 557
            R+
Sbjct: 555 SRA 557



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 207/445 (46%), Gaps = 41/445 (9%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +  +I+AY +S     +I  FN M      P    +N ++     G   F      F++ 
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFV-VGSSSFNQWWCFFNES 155

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
            +  V  D  +F  ++  C   G  E + +L  E+   G   ++  Y TL+D  CK  ++
Sbjct: 156 -KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           + A ++  EM    +  N  TY+ +I G  K G       M+ +M+  G+  +  +YN V
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCV 274

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           ++   K GR ++A  V  EM   G+  + VTYN L+GG  ++ K +E   + +QMK+D +
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGI 334

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           +PNL+TY+TLID +       +A+ + R+ K  GL   +V Y+ L+   CK G    A  
Sbjct: 335 NPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
           ++ EM + GI+P+ VTY  +ID F RS       D++E+ +              Q    
Sbjct: 395 VVKEMEERGIKPSKVTYTILIDTFARS-------DNMEKAI--------------QLRSS 433

Query: 591 VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSA 650
           ++E G T +  +  +  L+     +G+     R        +F+ M + K +PN V ++ 
Sbjct: 434 MEELGLTPD--VHTYSVLIHGFCIKGRMNEASR--------LFKSMVEKKFEPNEVIYNT 483

Query: 651 -ILNACSRCNSFEDASMLLEELRLF 674
            +L  C   +S+         LRLF
Sbjct: 484 MVLGYCKEGSSY-------RALRLF 501



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 93/435 (21%), Positives = 171/435 (39%), Gaps = 84/435 (19%)

Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
           G L+  A++L  +++   I    FT ++LL  + +         +               
Sbjct: 52  GNLYSHAQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRL--------------- 96

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y  +I+ Y ++  LD ++  F+EM   G       +N +L+       F +      E +
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
              +  D  ++  ++ G  + G+ ++   +  +++    SPN++ Y+TLID   K G  +
Sbjct: 157 IK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           +A  +F E  + GL A+   Y+ LI  L KNG+ +    + ++M + G+ PN+ TYN   
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYN--- 272

Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII--KVFGQLV 609
                     C ++ + +D G+ K     DA    D+  ++E G + N +    + G L 
Sbjct: 273 ----------CVMNQLCKD-GRTK-----DAFKVFDE--MRERGVSCNIVTYNTLIGGLC 314

Query: 610 AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
            E       E            V  +M    I PN++T++ +++                
Sbjct: 315 REMKANEANE------------VMDQMKSDGINPNLITYNTLIDG--------------- 347

Query: 670 ELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQK 729
                             G R     +ALSL  ++K    S +   YN L       G  
Sbjct: 348 ----------------FCGVRK--LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 730 RGAQLVVLEGKRRQV 744
            GA  VV E + R +
Sbjct: 390 SGAGKVVKEMEERGI 404


>gi|449018641|dbj|BAM82043.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
           10D]
          Length = 805

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 189/363 (52%), Gaps = 6/363 (1%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNT-VYAFSALISAYGRSGYCQEAISVFNSMKRY 257
           ++S L + G+   A ++      EG+    V ++S LIS  G+ G   +AI +F+ M R 
Sbjct: 367 ILSALYKSGRAADALSLCRIVEREGHIEIDVASYSILISCLGKCGASAQAIEMFHKMIRN 426

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGV--QPDRITFNSLLAVCSRGGLW 315
            + PN  T++A+  A   G   F   + +F  M+R     + + + +N++L    R G  
Sbjct: 427 GVAPNAFTFSALFGALTDGAF-FDQAMRLFQ-MIRASYPNELNVVVYNAVLKYVGRAGRI 484

Query: 316 EAARNLFNEM-VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           +AA +L  +M  +R +  DI TY T+LD   K   + LA+ ++  M  + + PN   Y++
Sbjct: 485 DAALDLLGQMEQNRNVQPDIVTYGTILDICAKKQDVSLAYAVLDRMRKRGMRPNNFCYAS 544

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +ID  A+AG  D A ++F +++  G+  D    N +L  +A+    E A    +EM S+G
Sbjct: 545 LIDACARAGLPDQAESLFRQLRAEGLEYDLFICNALLGAFARAKMVERAFQAFEEMRSAG 604

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +R D +T+N L+    +  ++D+  + FE MK   +S +  TY+ LID  SK G+ + A 
Sbjct: 605 VRGDRITFNTLITAAARAREFDKAWKAFETMKKSNISADATTYNALIDACSKSGMTELAF 664

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            +F E +QA L+  +  ++ALI A  K   +  A  +L  M   G+ P+  T N ++ A 
Sbjct: 665 ALFNEMRQAHLQPTIFTFNALIGACTKLQDMRRATQVLMLMHGFGVYPDTFTLNILLTAC 724

Query: 555 GRS 557
            R+
Sbjct: 725 ARN 727



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 179/379 (47%), Gaps = 14/379 (3%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK- 255
           S +IS LG+ G    A  +F   +  G     + FSAL  A     +  +A+ +F  ++ 
Sbjct: 401 SILISCLGKCGASAQAIEMFHKMIRNGVAPNAFTFSALFGALTDGAFFDQAMRLFQMIRA 460

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGL 314
            Y  + N+V YNAV+   G+ G      +++   M +N  VQPD +T+ ++L +C++   
Sbjct: 461 SYPNELNVVVYNAVLKYVGRAG-RIDAALDLLGQMEQNRNVQPDIVTYGTILDICAKKQD 519

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A  + + M  RG+  + F Y +L+DA  +    D A  +  ++ A+ +  ++   + 
Sbjct: 520 VSLAYAVLDRMRKRGMRPNNFCYASLIDACARAGLPDQAESLFRQLRAEGLEYDLFICNA 579

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++  +A+A  ++ A   F EM+  G+  DR+++NT+++  A+   F++A    + M+ S 
Sbjct: 580 LLGAFARAKMVERAFQAFEEMRSAGVRGDRITFNTLITAAARAREFDKAWKAFETMKKSN 639

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           I  DA TYNAL+    K G  +    +F +M+   + P + T++ LI   +K    + A 
Sbjct: 640 ISADATTYNALIDACSKSGMTELAFALFNEMRQAHLQPTIFTFNALIGACTKLQDMRRAT 699

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           Q+       G+  D    + L+ A  +N   + A+SL+ E            Y   +D  
Sbjct: 700 QVLMLMHGFGVYPDTFTLNILLTACARNEDFDYAISLVREFE--------TNYRVRLDRL 751

Query: 555 GRSATTECTV---DDVERD 570
           G S  T   +   D   RD
Sbjct: 752 GSSIVTNLCIKACDSQSRD 770



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 194/427 (45%), Gaps = 25/427 (5%)

Query: 78  PFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFAR 137
           P H  +    S   LAP     RSTR ++K+                   AL+  +  A 
Sbjct: 337 PLHRSASQHRSDGSLAPQVREIRSTRQLNKIL-----------------SALYK-SGRAA 378

Query: 138 DDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS 197
           D +SL  I+++          Y+ L+  LG  G  ++AI+ F   ++     N      S
Sbjct: 379 DALSLCRIVEREGHIEIDVASYSILISCLGKCGASAQAIEMFHKMIRNGVAPN--AFTFS 436

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGN--TVYAFSALISAYGRSGYCQEAISVFNSMK 255
           A+   L      D A  +F+  +   Y N   V  ++A++   GR+G    A+ +   M+
Sbjct: 437 ALFGALTDGAFFDQAMRLFQM-IRASYPNELNVVVYNAVLKYVGRAGRIDAALDLLGQME 495

Query: 256 R-YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           +  N++P++VTY  ++D C K   D      + D M + G++P+   + SL+  C+R GL
Sbjct: 496 QNRNVQPDIVTYGTILDICAKKQ-DVSLAYAVLDRMRKRGMRPNNFCYASLIDACARAGL 554

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
            + A +LF ++   G++ D+F  N LL A  +   ++ AF+   EM +  +  + +T++T
Sbjct: 555 PDQAESLFRQLRAEGLEYDLFICNALLGAFARAKMVERAFQAFEEMRSAGVRGDRITFNT 614

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I   A+A   D A   F  MK   I  D  +YN ++   +K G  E A  +  EM  + 
Sbjct: 615 LITAAARAREFDKAWKAFETMKKSNISADATTYNALIDACSKSGMTELAFALFNEMRQAH 674

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           ++    T+NAL+G   K        ++   M    V P+  T + L+   ++   +  A+
Sbjct: 675 LQPTIFTFNALIGACTKLQDMRRATQVLMLMHGFGVYPDTFTLNILLTACARNEDFDYAI 734

Query: 495 QIFREFK 501
            + REF+
Sbjct: 735 SLVREFE 741



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 166/370 (44%), Gaps = 34/370 (9%)

Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
            N +L+   + G    A +L   +   G I+ D+ +Y+ L+  + K      A E+  +M
Sbjct: 364 LNKILSALYKSGRAADALSLCRIVEREGHIEIDVASYSILISCLGKCGASAQAIEMFHKM 423

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF-LGIGLDRVSYNTVLSIYAKLGR 419
               ++PN  T+S +          D A+ +F  ++      L+ V YN VL    + GR
Sbjct: 424 IRNGVAPNAFTFSALFGALTDGAFFDQAMRLFQMIRASYPNELNVVVYNAVLKYVGRAGR 483

Query: 420 FEEALLVCKEMESS-GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
            + AL +  +ME +  ++ D VTY  +L    K+        + ++M+   + PN   Y+
Sbjct: 484 IDAALDLLGQMEQNRNVQPDIVTYGTILDICAKKQDVSLAYAVLDRMRKRGMRPNNFCYA 543

Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
           +LID  ++ GL  +A  +FR+ +  GL+ D+ + +AL+ A  +  +VE A    +EM   
Sbjct: 544 SLIDACARAGLPDQAESLFRQLRAEGLEYDLFICNALLGAFARAKMVERAFQAFEEMRSA 603

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
           G+R + +T+N++I A  R+           R+  K        A  +    ++     T 
Sbjct: 604 GVRGDRITFNTLITAAARA-----------REFDKA-----WKAFETMKKSNISADATTY 647

Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
           N +I         K+G  +              +F +M +  ++P + TF+A++ AC++ 
Sbjct: 648 NALIDA-----CSKSGMTE----------LAFALFNEMRQAHLQPTIFTFNALIGACTKL 692

Query: 659 NSFEDASMLL 668
                A+ +L
Sbjct: 693 QDMRRATQVL 702



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/303 (20%), Positives = 125/303 (41%), Gaps = 71/303 (23%)

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N +LS   K GR  +AL +C+ +E  G                                 
Sbjct: 365 NKILSALYKSGRAADALSLCRIVEREGH-------------------------------- 392

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
             +  ++ +YS LI    K G   +A+++F +  + G+  +   +SAL  AL      + 
Sbjct: 393 --IEIDVASYSILISCLGKCGASAQAIEMFHKMIRNGVAPNAFTFSALFGALTDGAFFDQ 450

Query: 528 AVSLLDEMTKEGI--RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           A+ L  +M +       NVV YN+++   GR+   +  +D     LG+ +++ N+     
Sbjct: 451 AMRLF-QMIRASYPNELNVVVYNAVLKYVGRAGRIDAALDL----LGQMEQNRNV----- 500

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
           Q D             I  +G ++   A         +Q++     V  +M K  ++PN 
Sbjct: 501 QPD-------------IVTYGTILDICAK--------KQDVSLAYAVLDRMRKRGMRPNN 539

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRL--FDNQVYGVAHGLLMGY-RDNIWVQALSLFD 702
             ++++++AC+R    + A  L  +LR    +  ++ + + LL  + R  +  +A   F+
Sbjct: 540 FCYASLIDACARAGLPDQAESLFRQLRAEGLEYDLF-ICNALLGAFARAKMVERAFQAFE 598

Query: 703 EVK 705
           E++
Sbjct: 599 EMR 601


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 216/500 (43%), Gaps = 96/500 (19%)

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVID-ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFN 303
           ++A +V   M      P+  TY+ VI   C    V+     ++F +M RNG+ PD  T+ 
Sbjct: 104 EKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVE--KAFQLFQEMKRNGITPDVYTYT 161

Query: 304 SLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAK 363
           +LL    + GL E ARN F+EM   G   ++ TY  L+ A  K  ++  A EI   M + 
Sbjct: 162 TLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSN 221

Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL-----------------DRVS 406
              PN+VTY+ +IDG+ KAG  + A  +++ MK   + +                 + V+
Sbjct: 222 GCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVT 281

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           Y  ++    K  + +EA  + + M   G   + + Y+AL+ G+ K GK DE + +F +M 
Sbjct: 282 YGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKML 341

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
               SPN+ TYS+LID   K      A+++  +  +     +VV+Y+ ++D LCK G  +
Sbjct: 342 GHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTD 401

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
            A  L+  M ++G  PNVVTY ++ID FG                               
Sbjct: 402 EAYRLMLMMEEKGCYPNVVTYTAMIDGFG------------------------------- 430

Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
                 +AGR D                      RC       L + Q M      PN +
Sbjct: 431 ------KAGRVD----------------------RC-------LELLQLMTSKGCAPNFI 455

Query: 647 TFSAILNACSRCNSFEDASMLLEELRLFDNQVY-----GVAHGLLMGYRDNIWVQALSLF 701
           T+  ++N C      +DA  LLEE++    Q Y     G+   ++ G+    +V +L L 
Sbjct: 456 TYRVLINHCCAAGLLDDAHKLLEEMK----QTYWPKHIGMYRKVIEGFSHE-FVASLGLL 510

Query: 702 DEVKLMDSSTASAFYNALTD 721
            E+    S      Y  L D
Sbjct: 511 AELSEDGSVPILPVYKLLID 530



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 181/375 (48%), Gaps = 18/375 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I  L    KV+ A  +F+     G    VY ++ L+  + + G  ++A + F+ M++
Sbjct: 126 SKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQ 185

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               PN+VTY A+I A  K         EIF+ ML NG  P+ +T+ +L+    + G  E
Sbjct: 186 DGCAPNVVTYTALIHAYLKTR-KLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETE 244

Query: 317 AARNLFNEMVHRGID-----------------QDIFTYNTLLDAICKGAQMDLAFEIMAE 359
            A  ++  M +  +D                  ++ TY  L+D +CK  ++  A +++  
Sbjct: 245 KACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLET 304

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M  +   PN + Y  +IDG+ K G+LD+A  +F++M   G   +  +Y++++    K  R
Sbjct: 305 MSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKR 364

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            + AL V  +M  +    + V Y  ++ G  K GK DE  R+   M+     PN++TY+ 
Sbjct: 365 LDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTA 424

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
           +ID + K G     +++ +     G   + + Y  LI+  C  GL++ A  LL+EM +  
Sbjct: 425 MIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTY 484

Query: 540 IRPNVVTYNSIIDAF 554
              ++  Y  +I+ F
Sbjct: 485 WPKHIGMYRKVIEGF 499



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 191/392 (48%), Gaps = 22/392 (5%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L  +GK + A N+    +++G+      +S +I     +   ++A  +F  MKR  + P+
Sbjct: 97  LCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPD 156

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
           + TY  ++D   K G+  +     FD+M ++G  P+ +T+ +L+    +      A  +F
Sbjct: 157 VYTYTTLLDRFCKVGL-IEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIF 215

Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-------PAKNI---------- 365
             M+  G   +I TY  L+D  CK  + + A +I A M       P  +I          
Sbjct: 216 EMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELK 275

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
            PNVVTY  ++DG  KA ++ +A ++   M   G   +++ Y+ ++  + K+G+ +EA  
Sbjct: 276 EPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQE 335

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           V  +M   G   +  TY++L+    K  + D   ++  +M  +  +PN++ Y+ ++D   
Sbjct: 336 VFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLC 395

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G   EA ++    ++ G   +VV Y+A+ID   K G V+  + LL  MT +G  PN +
Sbjct: 396 KVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFI 455

Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
           TY  +I+    +      +DD  + L + K++
Sbjct: 456 TYRVLINHCCAAG----LLDDAHKLLEEMKQT 483



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 191/387 (49%), Gaps = 27/387 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I    +  K+  A  IFE  L+ G    +  ++ALI  + ++G  ++A  ++  MK 
Sbjct: 196 TALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKN 255

Query: 257 YNL-----------------KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDR 299
             +                 +PN+VTY A++D   K     K   ++ + M   G +P++
Sbjct: 256 DKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAH-KVKEARDLLETMSLEGCEPNQ 314

Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
           I +++L+    + G  + A+ +F +M+  G   +++TY++L+D + K  ++DLA +++ +
Sbjct: 315 IIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTK 374

Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
           M   + +PNVV Y+ M+DG  K G+ D+A  +   M+  G   + V+Y  ++  + K GR
Sbjct: 375 MLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGR 434

Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
            +  L + + M S G   + +TY  L+      G  D+  ++ E+MK      ++  Y  
Sbjct: 435 VDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRK 494

Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK-E 538
           +I+ +S    +  ++ +  E  + G    + +Y  LID   K G +E A+ L +E++   
Sbjct: 495 VIEGFSHE--FVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFS 552

Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVD 565
               N  TY S+I+    S T  C VD
Sbjct: 553 AAYQN--TYVSLIE----SLTLACKVD 573



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 123/519 (23%), Positives = 230/519 (44%), Gaps = 54/519 (10%)

Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
           M+  G       +N+L+ A C+      A++++ +M      P  V Y+ +I G      
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 385 LDD------ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           L        A   ++EM  +G+ L++V+          +G+FE+A  V +EM S G   D
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
           + TY+ ++G      K ++  ++F++MK + ++P++ TY+TL+D + K GL ++A   F 
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E +Q G   +VV Y+ALI A  K   +  A  + + M   G  PN+VTY ++ID   ++ 
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK- 617
            TE       R    + +  ++D      D +++E        +  +G LV       K 
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPN------VVTYGALVDGLCKAHKV 295

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL--RLFD 675
           KE R   E + + G          +PN + + A+++   +    ++A  +  ++      
Sbjct: 296 KEARDLLETMSLEGC---------EPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCS 346

Query: 676 NQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTAS--AFYNALTDMLWHFGQKRGAQ 733
             VY  +  +   ++D     AL +    K++++S A     Y  + D L   G+   A 
Sbjct: 347 PNVYTYSSLIDKLFKDKRLDLALKVL--TKMLENSCAPNVVIYTEMVDGLCKVGKTDEAY 404

Query: 734 LVVLEGKRRQVWENVWS--------------ESCLD-LHLMSS-GAARAMVHAWLLNIHS 777
            ++L  + +  + NV +              + CL+ L LM+S G A   +   +L  H 
Sbjct: 405 RLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHC 464

Query: 778 ----IVFEGHELPKLLSILTGWGKHSKVVGDGALRRAVE 812
               ++ + H+L + +   T W KH      G  R+ +E
Sbjct: 465 CAAGLLDDAHKLLEEMK-QTYWPKHI-----GMYRKVIE 497



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 182/457 (39%), Gaps = 69/457 (15%)

Query: 159 YTFLLRELGNRGEWSKAIQCFA---------------FAVKREERKNDQGKLASAMISIL 203
           YT L+      GE  KA Q +A               F +   E K        A++  L
Sbjct: 230 YTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGL 289

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
            +  KV  A+++ ET   EG       + ALI  + + G   EA  VF  M  +   PN+
Sbjct: 290 CKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNV 349

Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
            TY+++ID   K        +++   ML N   P                          
Sbjct: 350 YTYSSLIDKLFKDK-RLDLALKVLTKMLENSCAP-------------------------- 382

Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
                    ++  Y  ++D +CK  + D A+ +M  M  K   PNVVTY+ MIDG+ KAG
Sbjct: 383 ---------NVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAG 433

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
           R+D  L +   M   G   + ++Y  +++     G  ++A  + +EM+ +   K    Y 
Sbjct: 434 RVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYR 493

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
            ++ G+  +  +     +  ++  D   P L  Y  LID + K G  + A+++  E    
Sbjct: 494 KVIEGFSHE--FVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSF 551

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
              A    Y +LI++L     V+ A  L  +MT+ G  P +     +I    R       
Sbjct: 552 S-AAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLR------- 603

Query: 564 VDDVERDLGKQKESANL-DAMCSQDDKDVQEAGRTDN 599
                  +GK +E+  L D++C  D   VQ+    D 
Sbjct: 604 -------VGKWEEALQLSDSICQMDIHWVQQEQTVDT 633


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 194/371 (52%), Gaps = 9/371 (2%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTV----YAFSALISAYGRSGYCQEAISVFN 252
           + +++++ + G  DLA   +   ++    + +     +F+ +I A  R G   +A+ VF 
Sbjct: 140 NTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFR 199

Query: 253 SMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCS 310
            M   N   +  TY+ ++   C +G +D    V + D+M   G  P+ + FN L+ A+C 
Sbjct: 200 GMSDRNCVADGYTYSTLMHGLCNEGRID--EAVSLLDEMQVEGTFPNPVAFNVLISALCK 257

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           +G L  A++ L + M  +G   +  TYN+L+  +C   ++D A  ++  M A    PN +
Sbjct: 258 KGDLSRASK-LVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDI 316

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           T+ T++DG+ K GR  D + +   ++  G   +  SY++++S   K G+ E  + + KEM
Sbjct: 317 TFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEM 376

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
              G + + + Y+AL+ G  ++GK DE +    +MK    +PN  TYS+L+  Y + G  
Sbjct: 377 VEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDI 436

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            +A+ +++E          V YS LI+ LCKNG ++ A+ +  +M   GI+ +VV Y+S+
Sbjct: 437 HKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSM 496

Query: 551 IDAFGRSATTE 561
           I  F  +   E
Sbjct: 497 IHGFCNAQLVE 507



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 182/386 (47%), Gaps = 40/386 (10%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I  L R+G VD A  +F    +       Y +S L+      G   EA+S+ + M+   
Sbjct: 181 VIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 240

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
             PN V +N +I A  K G D     ++ D+M   G  P+ +T+NSL+  +C +G L + 
Sbjct: 241 TFPNPVAFNVLISALCKKG-DLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKL-DK 298

Query: 318 ARNLFNEMV-HRGIDQDI----------------------------------FTYNTLLD 342
           A +L N MV ++ +  DI                                  F+Y++L+ 
Sbjct: 299 AMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLIS 358

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            + K  + +   ++  EM  K   PN + YS +IDG  + G+ D+A     EMK  G   
Sbjct: 359 GLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTP 418

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
           +  +Y++++  Y + G   +A+LV KEM  +      V Y+ L+ G  K GK  E   ++
Sbjct: 419 NSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVW 478

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF--KQAGLKADVVLYSALIDALC 520
           +QM +  +  +++ YS++I  +    L ++ M++F +       L+ DVV Y+ L++A C
Sbjct: 479 KQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFC 538

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVT 546
               V  A+ +L+ M  +G  P+ +T
Sbjct: 539 TKNSVSRAIDILNTMLDQGCDPDFIT 564



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 108/449 (24%), Positives = 190/449 (42%), Gaps = 95/449 (21%)

Query: 311 RGGLWEAARNLFNEM-VHRGIDQDIFTYNTLLD--------------------------- 342
           +  L + A +LF+ M       Q + ++NT+L+                           
Sbjct: 112 KAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNI 171

Query: 343 ------------AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
                       A+C+   +D A E+   M  +N   +  TYST++ G    GR+D+A++
Sbjct: 172 QPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVS 231

Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
           +  EM+  G   + V++N ++S   K G    A  +   M   G   + VTYN+L+ G  
Sbjct: 232 LLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLC 291

Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK------------------------ 486
            +GK D+   +  +M A+   PN +T+ TL+D + K                        
Sbjct: 292 LKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEF 351

Query: 487 ------GGLYKE-----AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
                  GL+KE      MQ+++E  + G K + ++YSALID LC+ G  + A   L EM
Sbjct: 352 SYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEM 411

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
             +G  PN  TY+S++  +  +        D+ + +   KE  + D    +    +   G
Sbjct: 412 KNKGHTPNSFTYSSLMWGYFEAG-------DIHKAILVWKEMTDNDCNHHEVCYSILING 464

Query: 596 RTDNQIIK----VFGQLVAEK------AGQGKKENRCRQEILCI-LGVFQKM--HKLKIK 642
              N  +K    V+ Q+++        A        C  +++   + +F +M  H  K++
Sbjct: 465 LCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQ 524

Query: 643 PNVVTFSAILNACSRCNSFEDASMLLEEL 671
           P+VVT++ +LNA    NS   A  +L  +
Sbjct: 525 PDVVTYNILLNAFCTKNSVSRAIDILNTM 553



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/392 (21%), Positives = 175/392 (44%), Gaps = 40/392 (10%)

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM----KFLGIGLDRV 405
           +DL   + AE   K     V +++T+++   + G  D AL  ++ +     F  I  + +
Sbjct: 120 LDLFHRMGAEFHCKQ---TVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGL 176

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           S+N V+    ++G  ++A+ V + M       D  TY+ L+ G   +G+ DE   + ++M
Sbjct: 177 SFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM 236

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           + +   PN + ++ LI    K G    A ++       G   + V Y++L+  LC  G +
Sbjct: 237 QVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKL 296

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
           + A+SLL+ M      PN +T+ +++D F +            R L   +   +L     
Sbjct: 297 DKAMSLLNRMVANKCVPNDITFGTLVDGFVKHG----------RALDGVRVLVSL----- 341

Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
                 +E G   N+    +  L++    +GK E+         + ++++M +   KPN 
Sbjct: 342 ------EEKGYRGNEF--SYSSLISGLFKEGKGEHG--------MQLWKEMVEKGCKPNT 385

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GYRDNIWV-QALSLFDE 703
           + +SA+++   R    ++A   L E++   +      +  LM GY +   + +A+ ++ E
Sbjct: 386 IVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKE 445

Query: 704 VKLMDSSTASAFYNALTDMLWHFGQKRGAQLV 735
           +   D +     Y+ L + L   G+ + A +V
Sbjct: 446 MTDNDCNHHEVCYSILINGLCKNGKLKEALIV 477



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/343 (20%), Positives = 147/343 (42%), Gaps = 21/343 (6%)

Query: 74  PNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVT 133
           PNP  F+ L      K +L+      R+++ V  M      +     + V     +H + 
Sbjct: 243 PNPVAFNVLISALCKKGDLS------RASKLVDNMF-----LKGCVPNEVTYNSLVHGLC 291

Query: 134 AFARDDVSLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKND 191
              + D ++  +L +     C  +D TF  L+      G     ++      ++  R N+
Sbjct: 292 LKGKLDKAMS-LLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNE 350

Query: 192 QGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVF 251
                S++IS L + GK +    +++  + +G       +SALI    R G   EA    
Sbjct: 351 FS--YSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYL 408

Query: 252 NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCS 310
             MK     PN  TY++++    + G D    + ++ +M  N      + ++ L+  +C 
Sbjct: 409 IEMKNKGHTPNSFTYSSLMWGYFEAG-DIHKAILVWKEMTDNDCNHHEVCYSILINGLCK 467

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN--ISPN 368
            G L EA   ++ +M+ RGI  D+  Y++++   C    ++   ++  +M   N  + P+
Sbjct: 468 NGKLKEALI-VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPD 526

Query: 369 VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
           VVTY+ +++ +     +  A+++ + M   G   D ++ +  L
Sbjct: 527 VVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFL 569



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 92/224 (41%), Gaps = 42/224 (18%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+  L   G+    +Q +   V++  + N    + SA+I  L R GK D AK     
Sbjct: 353 YSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTI--VYSALIDGLCREGKPDEAKEYLIE 410

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             N+G+    + +S+L+  Y  +G   +AI V+  M   +   + V Y+ +I+   K G 
Sbjct: 411 MKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNG- 469

Query: 279 DFKHVVEIFDDMLRNGV-------------------------------------QPDRIT 301
             K  + ++  ML  G+                                     QPD +T
Sbjct: 470 KLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVT 529

Query: 302 FNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
           +N LL A C++  +  A  ++ N M+ +G D D  T +  L  +
Sbjct: 530 YNILLNAFCTKNSVSRAI-DILNTMLDQGCDPDFITCDIFLKTL 572


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 219/477 (45%), Gaps = 66/477 (13%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           V+ ++ LI    ++    +A  + + M    + P+ VT+N+++D   K G  F+    + 
Sbjct: 10  VFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAG-KFERAHSLL 68

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
             M     +P   T+N+L++   +    + A+ L +E V  G   D+ TY+ L D +CK 
Sbjct: 69  AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKR 128

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            ++D AFE++ EM     +PN+VTY+T+IDG  KA + + A  +   +   G   D V+Y
Sbjct: 129 GRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTY 188

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
             ++    K GR ++AL + + M   G     +TY AL+ G  + G+ DE   +F++M +
Sbjct: 189 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 248

Query: 468 -DCV-------------------------------SPNLLTYSTLIDVYSKGGLYKEAMQ 495
            DC                                +P +  Y+ L+D Y K G   E   
Sbjct: 249 KDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPN 308

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           +F +    G   ++  Y+ ++D LCK+G V+ A   L+ M   G  P+VV+YN IID   
Sbjct: 309 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 368

Query: 556 RSATTECTVDDVERDLGKQKESAN-LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAG 614
           +++              K KE+   LD M         +AG   + +   +  L+A    
Sbjct: 369 KAS--------------KPKEARQVLDQM--------IQAGIPPDAV--TYNTLMA---- 400

Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           Q  KE R    +    G+ + M K  + P+ VT++ +++  S+ N   DA  L+ E+
Sbjct: 401 QFCKEERFDDAV----GILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEM 453



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 195/404 (48%), Gaps = 10/404 (2%)

Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           D  TF  ++  L   G++ +A    A   +R  R +      + +IS L +   VD AK 
Sbjct: 44  DTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPS--CCTYNTLISGLCKQQNVDRAKT 101

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
           + +  ++ G+   V  +S L     + G   EA  +   M      PNLVTYN +ID   
Sbjct: 102 LVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLC 161

Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
           K     +   E+ + ++ +G  PD +T+  ++    + G  + A  +   M+ RG    +
Sbjct: 162 KAS-KTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSV 220

Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
            TY  L++ +C+  ++D A  I  EM +K+ + + + Y ++++GY K+ R  +A  +   
Sbjct: 221 ITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDG 280

Query: 395 MKFLGIGLDRVS-YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           ++    G   +  YN ++  Y K GR +E   V ++M   G   +  TYN ++ G  K G
Sbjct: 281 IR----GTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHG 336

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
           K DE     E M +    P++++Y+ +ID   K    KEA Q+  +  QAG+  D V Y+
Sbjct: 337 KVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYN 396

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
            L+   CK    + AV +L  M K G+ P+ VTYN++I    ++
Sbjct: 397 TLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQT 440



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 167/368 (45%), Gaps = 35/368 (9%)

Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
           L + GKVD A    E+  + G    V +++ +I    ++   +EA  V + M +  + P+
Sbjct: 332 LCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPD 391

Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
            VTYN ++    K    F   V I  +M++ GV PD +T+N+L++  S+      A  L 
Sbjct: 392 AVTYNTLMAQFCKEE-RFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELM 450

Query: 323 NEMVHRG-IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           +EM+  G +     TYNT++D +CK   +  A  +M  M    +  N VTY+  ID   K
Sbjct: 451 HEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCK 510

Query: 382 AGRLDDALNMFSEMKFLG---------IGL------DRVS------------------YN 408
            GRLD+A ++ SEM  L          IGL      DR S                  +N
Sbjct: 511 EGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFN 570

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
            ++  + K  R +EAL + + M   G     +TYN ++    K  K D+   +F++M   
Sbjct: 571 LLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVR 630

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            +  + ++Y+ LI      G  KEA+Q+  E   +  + D +    L  AL   G  E A
Sbjct: 631 GIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEA 690

Query: 529 VSLLDEMT 536
             LL  MT
Sbjct: 691 AELLRRMT 698



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 11/243 (4%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID-ACGKGGVDFKHVVEIFDD 289
           ++ +I    + G  ++A+ + + M  + ++ N VTYN  ID  C +G +D    +    D
Sbjct: 466 YNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD 525

Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH-RGIDQDIFTYNTLLDAICKGA 348
            LR     D +++ +++    +    + A  L  EMV  +G+     T+N L+DA  K  
Sbjct: 526 TLR-----DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTK 580

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++D A  ++  M  +  SP+V+TY+ +I    K  ++D A  +F EM   GI    VSY 
Sbjct: 581 RLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYT 640

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE----VRRMFEQ 464
            ++      GR +EAL V +EM SS    D +    L      QG+ +E    +RRM  +
Sbjct: 641 VLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTK 700

Query: 465 MKA 467
           M +
Sbjct: 701 MDS 703


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 181/334 (54%), Gaps = 1/334 (0%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
           G+   V  ++ LI    + G  ++A  +F  M +  L  N  TY  +I+   K GV  K 
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVK-KQ 251

Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
             E+++ M  +GV P+  T+N ++    + G  + A  +F+EM  RG+  +I TYNTL+ 
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311

Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
            +C+  +++ A +++ +M +  I+PN++TY+T+IDG+   G+L  AL++  ++K  G+  
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371

Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
             V+YN ++S + + G    A  + KEME  GI+   VTY  L+  + +    ++  ++ 
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431

Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
             M+   + P++ TYS LI  +   G   EA ++F+   +   + + V+Y+ +I   CK 
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491

Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           G    A+ LL EM ++ + PNV +Y  +I+   +
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 170/331 (51%), Gaps = 2/331 (0%)

Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
           +  +I++Y +S     +IS FN M      P    +N ++     G   F      F++ 
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFV-VGSSSFNQWWSFFNEN 155

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
            ++ V  D  +F  L+  C   G  E + +L  E+   G   ++  Y TL+D  CK  ++
Sbjct: 156 -KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           + A ++  EM    +  N  TY+ +I+G  K G       M+ +M+  G+  +  +YN V
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           ++   K GR ++A  V  EM   G+  + VTYN L+GG  ++ K +E  ++ +QMK+D +
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           +PNL+TY+TLID +   G   +A+ + R+ K  GL   +V Y+ L+   C+ G    A  
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           ++ EM + GI+P+ VTY  +ID F RS   E
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNME 425



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 188/363 (51%), Gaps = 5/363 (1%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I    + G+++ AK++F      G       ++ LI+   ++G  ++   ++  M
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM 259

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
           +   + PNL TYN V++   K G   K   ++FD+M   GV  + +T+N+L+    R   
Sbjct: 260 QEDGVFPNLYTYNCVMNQLCKDGRT-KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A  + ++M   GI+ ++ TYNTL+D  C   ++  A  +  ++ ++ +SP++VTY+ 
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           ++ G+ + G    A  M  EM+  GI   +V+Y  ++  +A+    E+A+ +   ME  G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
           +  D  TY+ L+ G+  +G+ +E  R+F+ M      PN + Y+T+I  Y K G    A+
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           ++ +E ++  L  +V  Y  +I+ LCK    + A  L+++M   GI P+     SI+   
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST----SILSLI 554

Query: 555 GRS 557
            R+
Sbjct: 555 SRA 557



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 186/368 (50%), Gaps = 2/368 (0%)

Query: 187 ERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQE 246
           E    + +L   +I+   +   ++L+ + F   ++ G+      F+ L++    S    +
Sbjct: 88  ETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQ 147

Query: 247 AISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL 306
             S FN  K   +  ++ ++  +I  C + G + +   ++  ++   G  P+ + + +L+
Sbjct: 148 WWSFFNENKS-KVVLDVYSFGILIKGCCEAG-EIEKSFDLLIELTEFGFSPNVVIYTTLI 205

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
             C + G  E A++LF EM   G+  +  TY  L++ + K       FE+  +M    + 
Sbjct: 206 DGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF 265

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           PN+ TY+ +++   K GR  DA  +F EM+  G+  + V+YNT++    +  +  EA  V
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
             +M+S GI  + +TYN L+ G+   GK  +   +   +K+  +SP+L+TY+ L+  + +
Sbjct: 326 VDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR 385

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
            G    A ++ +E ++ G+K   V Y+ LID   ++  +E A+ L   M + G+ P+V T
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445

Query: 547 YNSIIDAF 554
           Y+ +I  F
Sbjct: 446 YSVLIHGF 453



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 176/358 (49%), Gaps = 5/358 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT L+     +GE  KA   F    K     N+  +  + +I+ L + G       ++E 
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANE--RTYTVLINGLFKNGVKKQGFEMYEK 258

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G    +Y ++ +++   + G  ++A  VF+ M+   +  N+VTYN +I    +  +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE-M 317

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
                 ++ D M  +G+ P+ IT+N+L+   C  G L +A  +L  ++  RG+   + TY
Sbjct: 318 KLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL-SLCRDLKSRGLSPSLVTY 376

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           N L+   C+      A +++ EM  + I P+ VTY+ +ID +A++  ++ A+ +   M+ 
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           LG+  D  +Y+ ++  +   G+  EA  + K M       + V YN ++ GY K+G    
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR 496

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
             ++ ++M+   ++PN+ +Y  +I+V  K    KEA ++  +   +G+     + S +
Sbjct: 497 ALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 204/433 (47%), Gaps = 31/433 (7%)

Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
           FNEMV  G       +N LL  +   +  +  +    E  +K +  +V ++  +I G  +
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCE 175

Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
           AG ++ + ++  E+   G   + V Y T++    K G  E+A  +  EM   G+  +  T
Sbjct: 176 AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERT 235

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  L+ G  K G   +   M+E+M+ D V PNL TY+ +++   K G  K+A Q+F E +
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSA 558
           + G+  ++V Y+ LI  LC+   +  A  ++D+M  +GI PN++TYN++ID F   G+  
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355

Query: 559 TTECTVDDVE-RDLGKQKESANL--DAMCSQDD--------KDVQEAGRTDNQIIKVFGQ 607
                  D++ R L     + N+     C + D        K+++E G   +++   +  
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKV--TYTI 413

Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
           L+   A     E   +  +         M +L + P+V T+S +++         +AS L
Sbjct: 414 LIDTFARSDNMEKAIQLRL--------SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465

Query: 668 LE---ELRLFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
            +   E     N+V  + + +++GY ++    +AL L  E++  + +   A Y  + ++L
Sbjct: 466 FKSMVEKNCEPNEV--IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523

Query: 724 WHFGQKRGAQLVV 736
               + + A+ +V
Sbjct: 524 CKERKSKEAERLV 536



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/326 (21%), Positives = 128/326 (39%), Gaps = 39/326 (11%)

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           Y  ++  Y +    +     F +M  +   P    ++ L+        + +    F E K
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            + +  DV  +  LI   C+ G +E +  LL E+T+ G  PNVV Y ++ID   +    E
Sbjct: 157 -SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
               D+  ++GK    AN                RT   +I    +   +K G       
Sbjct: 216 -KAKDLFFEMGKLGLVAN---------------ERTYTVLINGLFKNGVKKQG------- 252

Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV 681
                     +++KM +  + PN+ T++ ++N   +    +DA  + +E+R        V
Sbjct: 253 --------FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304

Query: 682 AHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEG 739
            +  L+G   R+    +A  + D++K    +     YN L D     G+   A  +  + 
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364

Query: 740 KRRQVWENVWSESCLDLHLMSSGAAR 765
           K R +     S S +  +++ SG  R
Sbjct: 365 KSRGL-----SPSLVTYNILVSGFCR 385


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 203/393 (51%), Gaps = 3/393 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT  +R LG    + +A +  A  ++ E  K D     + +I +L   G++  AK++F  
Sbjct: 268 YTICIRVLGQAKRFDEAYRILA-KMENEGCKPDV-ITHTVLIQVLCDAGRISDAKDVFWK 325

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                       +  L+  +G +G  Q  + ++N+MK      N+V Y AVIDA  + G 
Sbjct: 326 MKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 385

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            F+  +E+FD+M + G+ P++ ++NSL++   +   +  A  LF  M   G   + +T+ 
Sbjct: 386 VFE-ALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHV 444

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
             ++   K  +   A +    M +K I P+VV  + ++ G AK+GRL  A  +F E+K +
Sbjct: 445 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 504

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D ++Y  ++   +K  +F+EA+ +  +M  +    D +  N+L+    K G+ DE 
Sbjct: 505 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 564

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            R+F Q+K   + P   TY+TL+    + G  KE M +  E   +    +++ Y+ ++D 
Sbjct: 565 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 624

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           LCKNG V  A+ +L  MT +G  P++ +YN++I
Sbjct: 625 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVI 657



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 131/565 (23%), Positives = 268/565 (47%), Gaps = 42/565 (7%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           L+R  G  G+ ++        ++R+  K + G  A A+   LG  G +  A         
Sbjct: 134 LMRGHGRVGDMAEVFD----VMQRQIVKANVGTFA-AIFGGLGVEGGLRSAPVALPVMKE 188

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
            G     Y ++ L+    +SG+ +EA+ V+  M    + P++ TY+ ++ A GK   D +
Sbjct: 189 AGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRR-DVE 247

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            V+ +  +M  +GV+P+  ++   + V  +   ++ A  +  +M + G   D+ T+  L+
Sbjct: 248 TVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLI 307

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             +C   ++  A ++  +M   +  P+ VTY T++D +   G     + +++ MK  G  
Sbjct: 308 QVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYN 367

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + V+Y  V+    ++GR  EAL +  EM+  GI  +  +YN+L+ G+ K  ++ +   +
Sbjct: 368 DNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALEL 427

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F+ M      PN  T+   I+ Y K G   +A+Q +   K  G+  DVV  +A++  L K
Sbjct: 428 FKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 487

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
           +G +  A  +  E+   G+ P+ +TY  +I    +++  +  V  +  D+ +     ++ 
Sbjct: 488 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAV-KIFYDMIENNCVPDVL 546

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK------------AGQGKKENRCRQEILCI 629
           A+ S  D  + +AGR D +  ++F QL                AG G +E + ++    +
Sbjct: 547 AVNSLIDT-LYKAGRGD-EAWRIFYQLKEMNLEPTDGTYNTLLAGLG-REGKVKE----V 599

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA-SML--------LEELRLFDNQVYG 680
           + + ++M+     PN++T++ IL+   +  +  DA  ML        + +L  ++  +YG
Sbjct: 600 MHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 659

Query: 681 VAHGLLMGYRDNIWVQALSLFDEVK 705
           +        ++  + +A S+F ++K
Sbjct: 660 LV-------KEERYNEAFSIFCQMK 677



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 127/546 (23%), Positives = 247/546 (45%), Gaps = 44/546 (8%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL + G+ G+    ++   +   + +  ND     +A+I  L ++G+V  A  +F+ 
Sbjct: 338 YITLLDKFGDNGDSQSVME--IWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDE 395

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
              +G     Y++++LIS + ++    +A+ +F  M  +  KPN  T+   I+  GK G 
Sbjct: 396 MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE 455

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
             K  ++ ++ M   G+ PD +  N++L   ++ G    A+ +F+E+   G+  D  TY 
Sbjct: 456 SIK-AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 514

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            ++    K ++ D A +I  +M   N  P+V+  +++ID   KAGR D+A  +F ++K +
Sbjct: 515 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM 574

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            +     +YNT+L+   + G+ +E + + +EM  S    + +TYN +L    K G  ++ 
Sbjct: 575 NLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDA 634

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
             M   M      P+L +Y+T+I    K   Y EA  IF + K+  L  D      ++ +
Sbjct: 635 LDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPS 693

Query: 519 LCKNGLVESAVSLL-DEMTKEGIRPNVVTYNSIIDAFGRSATTE-------------CTV 564
             K GL++ A+ ++ D   + G + +  + +S+++   + A  E              T+
Sbjct: 694 FVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITL 753

Query: 565 DD-----VERDLGKQKESANLDAMCSQDDK----------DVQEAGRTDNQIIKVFGQLV 609
           DD     + + L KQK++     +  +             +    G  D  +I +   L 
Sbjct: 754 DDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLF 813

Query: 610 AEKAGQGKKENRCRQEILC-----------ILGVFQKMHKLKIKPNVVTFSAILNACSRC 658
           AE    G   +     +L            +L V ++MH+   +   VT++ I++   + 
Sbjct: 814 AEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKS 873

Query: 659 NSFEDA 664
              E A
Sbjct: 874 RRLEQA 879



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 197/448 (43%), Gaps = 50/448 (11%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL-----ASAMISILGRLGKVDLAK 213
           +   +   G  GE  KAIQ       R E    +G +      +A++  L + G++ +AK
Sbjct: 443 HVLFINYYGKSGESIKAIQ-------RYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAK 495

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDAC 273
            +F      G       ++ +I    ++    EA+ +F  M   N  P+++  N++ID  
Sbjct: 496 RVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTL 555

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
            K G        IF  +    ++P   T+N+LLA   R G  +   +L  EM H     +
Sbjct: 556 YKAGRG-DEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPN 614

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           + TYNT+LD +CK   ++ A +++  M  K   P++ +Y+T+I G  K  R ++A ++F 
Sbjct: 615 LITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFC 674

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE------------------------ 429
           +MK + I  D  +  T+L  + K+G  +EAL + K+                        
Sbjct: 675 QMKKVLIP-DYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKK 733

Query: 430 ------------MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
                       + SSGI  D      L+    KQ K  E   + ++ K+  VS     Y
Sbjct: 734 AGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLY 793

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           ++LI       L   A  +F E K+ G   D   Y+ L+DA+ K+  +E  + + +EM +
Sbjct: 794 NSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 853

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVD 565
           +G     VTYN+II    +S   E  +D
Sbjct: 854 KGYESTYVTYNTIISGLVKSRRLEQAID 881



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 173/358 (48%), Gaps = 5/358 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + ++  L + G V+ A ++  +   +G    + +++ +I    +     EA S+F  MK+
Sbjct: 619 NTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK 678

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
             L P+  T   ++ +  K G+  + +  I D  L+ G + DR + +SL+  +  + G+ 
Sbjct: 679 V-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIE 737

Query: 316 EAARNLFNEMV-HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
           ++    F E++   GI  D F    L+  +CK  +   A E++ +  +  +S     Y++
Sbjct: 738 KSIE--FAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNS 795

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
           +I G      +D A  +F+EMK LG G D  +YN +L    K  R EE L V +EM   G
Sbjct: 796 LICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKG 855

Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
                VTYN ++ G  K  + ++   ++  + +   SP   TY  L+D   K G  ++A 
Sbjct: 856 YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 915

Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
            +F E  + G KA+  +Y+ L++     G  E    L  +M  +GI P++ +Y  IID
Sbjct: 916 NLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 176/402 (43%), Gaps = 40/402 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI    +  K D A  IF   +       V A ++LI    ++G   EA  +F  +K 
Sbjct: 514 TMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKE 573

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
            NL+P   TYN ++   G+ G   K V+ + ++M  +   P+ IT+N++L    + G   
Sbjct: 574 MNLEPTDGTYNTLLAGLGREG-KVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVN 632

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A ++   M  +G   D+ +YNT++  + K  + + AF I  +M  K + P+  T  T++
Sbjct: 633 DALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTIL 691

Query: 377 DGYAKAGRLDDALNMFSEMKFL--GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
             + K G + +AL++  +  FL  G   DR S ++++    K    E+++   + + SSG
Sbjct: 692 PSFVKIGLMKEALHIIKDY-FLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSG 750

Query: 435 IRKDAV-----------------------------------TYNALLGGYGKQGKYDEVR 459
           I  D                                      YN+L+ G   +   D   
Sbjct: 751 ITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAE 810

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +F +MK     P+  TY+ L+D   K    +E +++  E  + G ++  V Y+ +I  L
Sbjct: 811 GLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGL 870

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
            K+  +E A+ L   +  +G  P   TY  ++D   ++   E
Sbjct: 871 VKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 912



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 93/439 (21%), Positives = 180/439 (41%), Gaps = 40/439 (9%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT +++      ++ +A++ F   +  E          +++I  L + G+ D A  IF  
Sbjct: 513 YTMMIKCCSKASKFDEAVKIFYDMI--ENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQ 570

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
                   T   ++ L++  GR G  +E + +   M   N  PNL+TYN ++D  C  G 
Sbjct: 571 LKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGA 630

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM------------ 325
           V+    +++   M   G  PD  ++N+++    +   +  A ++F +M            
Sbjct: 631 VN--DALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLC 688

Query: 326 -----------------------VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPA 362
                                  +  G   D  + ++L++ I K A ++ + E    + +
Sbjct: 689 TILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIAS 748

Query: 363 KNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEE 422
             I+ +      +I    K  +  +A  +  + K  G+ L    YN+++         + 
Sbjct: 749 SGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDI 808

Query: 423 ALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLID 482
           A  +  EM+  G   D  TYN LL   GK  + +E+ ++ E+M         +TY+T+I 
Sbjct: 809 AEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIIS 868

Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
              K    ++A+ ++      G       Y  L+D L K G +E A +L +EM + G + 
Sbjct: 869 GLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKA 928

Query: 543 NVVTYNSIIDAFGRSATTE 561
           N   YN +++    +  TE
Sbjct: 929 NCTIYNILLNGHRIAGNTE 947



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 133/327 (40%), Gaps = 47/327 (14%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           S N +L +    GR  +   V   M+   ++ +  T+ A+ GG G +G           M
Sbjct: 127 SCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVM 186

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           K   +  N  TY+ L+    K G  +EA++++R     G+   V  YS L+ A  K   V
Sbjct: 187 KEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDV 246

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK---------- 575
           E+ + LL EM   G++PNV +Y   I   G++       D+  R L K +          
Sbjct: 247 ETVLWLLREMEAHGVKPNVYSYTICIRVLGQAK----RFDEAYRILAKMENEGCKPDVIT 302

Query: 576 ESANLDAMCS----QDDKDV--------QEAGRT-------------DNQ-IIKVFGQLV 609
            +  +  +C      D KDV        Q+  R              D+Q +++++  + 
Sbjct: 303 HTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK 362

Query: 610 AEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
           A+             + LC +G       +F +M +  I P   +++++++   + + F 
Sbjct: 363 ADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFG 422

Query: 663 DASMLLEELRLFDNQVYGVAHGLLMGY 689
           DA  L + + +   +  G  H L + Y
Sbjct: 423 DALELFKHMDIHGPKPNGYTHVLFINY 449


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 238/503 (47%), Gaps = 42/503 (8%)

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDF 280
            G   +VY  + ++ +  +        S F  M    + P++ T+N +++A C +G   F
Sbjct: 134 RGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERG--KF 191

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
           K+   +   M  +GV P  +T+N+LL    + G ++AA  L + M  +GI  D+ TYN  
Sbjct: 192 KNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVF 251

Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
           +D +C+ ++    + ++  M    + PN +TY+T+I G+ + G+++ A  +F EM    +
Sbjct: 252 IDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNL 311

Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
             + ++YNT+++ +   G   EAL +   M S G+R + VTY ALL G  K  ++  V  
Sbjct: 312 LPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSS 371

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + E+M+   V  + ++Y+ +ID   K G+ +EA+Q+  +  +  +  DVV +S LI+   
Sbjct: 372 ILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFF 431

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           + G + +A  ++ +M K G+ PN + Y+++I  + +              +G  KE+ N 
Sbjct: 432 RVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCK--------------MGYLKEALNA 477

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
            A+       +  +G   +        LVA     GK E     E          M ++ 
Sbjct: 478 YAV-------MNHSGHVADHF--TCNVLVATFCRYGKLE---EAEYF-----MNHMSRMG 520

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN-----QVYGVAHGLLMGYRDNIWV 695
           + PN VTF  I+N          A  + +++  F +        G+  GL +G   N   
Sbjct: 521 LDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHIN--- 577

Query: 696 QALSLFDEVKLMDSSTASAFYNA 718
           +AL  F  ++ + ++  +  +N 
Sbjct: 578 EALKFFHRLRCIPNAVDNVIFNT 600



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 189/356 (53%), Gaps = 3/356 (0%)

Query: 197 SAMISILGRLGKVDLAKNIF-ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           + +IS   R GK+++A  +F E +L     N++  ++ LI+ +  +G   EA+ + + M 
Sbjct: 284 NTLISGFVREGKIEVATKVFDEMSLFNLLPNSI-TYNTLIAGHCTTGNIGEALRLMDVMV 342

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            + L+PN VTY A+++   K   +F  V  I + M   GV+   I++ +++    + G+ 
Sbjct: 343 SHGLRPNEVTYGALLNGLYKNA-EFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGML 401

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A  L ++M+   ++ D+ T++ L++   +  +++ A EIM +M    + PN + YST+
Sbjct: 402 EEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTL 461

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I  Y K G L +ALN ++ M   G   D  + N +++ + + G+ EEA      M   G+
Sbjct: 462 IYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGL 521

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             ++VT++ ++ GYG  G   +   +F++M +    P+L TY  L+     GG   EA++
Sbjct: 522 DPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALK 581

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            F   +      D V+++  + + C++G +  A++L++EM      P+  TY ++I
Sbjct: 582 FFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLI 637



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 181/394 (45%), Gaps = 37/394 (9%)

Query: 202 ILGRL---GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +LG L    KVD+  + F+  L +G    V  F+ L++A    G  + A  +   M+   
Sbjct: 146 VLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESG 205

Query: 259 LKPNLVTYNAVID-ACGKG-----------------GVDFKHVVEIFDD----------- 289
           + P  VTYN +++  C KG                 GVD        D+           
Sbjct: 206 VYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGY 265

Query: 290 -----MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
                M RN V P+ IT+N+L++   R G  E A  +F+EM    +  +  TYNTL+   
Sbjct: 266 LLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGH 325

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           C    +  A  +M  M +  + PN VTY  +++G  K        ++   M+  G+ +  
Sbjct: 326 CTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSH 385

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
           +SY  ++    K G  EEA+ +  +M    +  D VT++ L+ G+ + GK +  + +  +
Sbjct: 386 ISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCK 445

Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
           M    + PN + YSTLI  Y K G  KEA+  +     +G  AD    + L+   C+ G 
Sbjct: 446 MYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGK 505

Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           +E A   ++ M++ G+ PN VT++ II+ +G S 
Sbjct: 506 LEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSG 539



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 189/396 (47%), Gaps = 2/396 (0%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
            YT L+  L  +G+   A+     A+++     +   + ++++  L + G    A  IFE 
Sbjct: 633  YTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPA-VYTSLVDGLLKHGHARAALYIFEE 691

Query: 219  ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             LN+       AF+ +I  Y R G   +   + ++MK  NL  NL TYN ++    K   
Sbjct: 692  MLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHA 751

Query: 279  DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                   ++ DM+R+G  PD+ +++SL+    +   ++ A  +   +   G   D FT+N
Sbjct: 752  -MARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFN 810

Query: 339  TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
             L+   C+  +M  AFE++ +M    + PNV TY+ + +G  +      A  +   +   
Sbjct: 811  MLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLES 870

Query: 399  GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            G       Y T+++   ++G  + A+ +  EM++ GI    V  +A++ G     K +  
Sbjct: 871  GSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENA 930

Query: 459  RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
              + + M    + P + T++TL+ VY K     +A+++    +   +K DVV Y+ LI  
Sbjct: 931  IWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISG 990

Query: 519  LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            LC NG +E+A  L +EM +  + PN   Y  +ID+F
Sbjct: 991  LCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSF 1026



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 185/370 (50%), Gaps = 25/370 (6%)

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
            F+ L+ VC R  +   A   F  M  RG++  ++T N +L ++ K  ++D+ +     M
Sbjct: 107 VFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGM 166

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
            AK I P+V T++ +++   + G+  +A  +  +M+  G+    V+YNT+L+ Y K GR+
Sbjct: 167 LAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRY 226

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
           + A  +   M S GI  D  TYN  +    +  +  +   + ++M+ + V PN +TY+TL
Sbjct: 227 KAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTL 286

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           I  + + G  + A ++F E     L  + + Y+ LI   C  G +  A+ L+D M   G+
Sbjct: 287 ISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGL 346

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVER-DLGKQKES-----ANLDAMCSQDDKDVQEA 594
           RPN VTY ++++   ++A        +ER  +G  + S     A +D +C   +  ++EA
Sbjct: 347 RPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCK--NGMLEEA 404

Query: 595 GRTDNQIIKV--------FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
            +  + ++KV        F  L+      GK  N   +EI+C      KM+K  + PN +
Sbjct: 405 VQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINN--AKEIMC------KMYKTGLVPNGI 456

Query: 647 TFSAIL-NAC 655
            +S ++ N C
Sbjct: 457 LYSTLIYNYC 466



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 160/331 (48%), Gaps = 2/331 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVF-NSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
           + ++ LI+   + G    A+ +   ++++  L PN   Y +++D   K G   +  + IF
Sbjct: 631 FTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHG-HARAALYIF 689

Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           ++ML   V+PD + FN ++   SR G      ++ + M  + +  ++ TYN LL    K 
Sbjct: 690 EEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKR 749

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
             M   F +  +M      P+  ++ ++I GY ++   D A+ +   +   G  +DR ++
Sbjct: 750 HAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTF 809

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           N +++ + +    ++A  + K+M    +  +  TYNAL  G  +   + +  R+ + +  
Sbjct: 810 NMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLE 869

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
               P    Y TLI+   + G  K AM++  E K  G+ +  V  SA++  L  +  +E+
Sbjct: 870 SGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIEN 929

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           A+ +LD M +  I P V T+ +++  + + A
Sbjct: 930 AIWVLDLMLEMQIIPTVATFTTLMHVYCKEA 960



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 112/511 (21%), Positives = 205/511 (40%), Gaps = 68/511 (13%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +AMI  L + G ++ A  + +  L       V  FS LI+ + R G    A  +   M +
Sbjct: 389 TAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYK 448

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
             L PN + Y+ +I    K G   K  +  +  M  +G   D  T N L+A   R G  E
Sbjct: 449 TGLVPNGILYSTLIYNYCKMGY-LKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLE 507

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A    N M   G+D +  T++ +++          AF +  +M +    P++ TY  ++
Sbjct: 508 EAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLL 567

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
            G    G +++AL  F  ++ +   +D V +NT L+   + G   +A+ +  EM ++   
Sbjct: 568 KGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFL 627

Query: 437 KDAVTYNALLGGYGKQGKY---------------------------DEVRR--------- 460
            D  TY  L+ G  K+GK                            D + +         
Sbjct: 628 PDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALY 687

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +FE+M    V P+ + ++ +ID YS+ G   +   I    K   L  ++  Y+ L+    
Sbjct: 688 IFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYA 747

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           K   +     L  +M + G  P+  +++S+I  + +S + +  +  +        E   +
Sbjct: 748 KRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILR---WITLEGHVI 804

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
           D               T N +I  F +               R E+     + ++M++  
Sbjct: 805 DRF-------------TFNMLITKFCE---------------RNEMKKAFELVKQMNQFM 836

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
           + PNV T++A+ N   R + F  A  +L+ L
Sbjct: 837 VIPNVDTYNALFNGLIRTSDFHKAHRVLQVL 867



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 98/473 (20%), Positives = 195/473 (41%), Gaps = 72/473 (15%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+      G   +A+   A+AV             + +++   R GK++ A+     
Sbjct: 458 YSTLIYNYCKMGYLKEALN--AYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNH 515

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG- 277
               G       F  +I+ YG SG   +A SVF+ M  +   P+L TY  ++     GG 
Sbjct: 516 MSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGH 575

Query: 278 ----VDFKH-----------------------------VVEIFDDMLRNGVQPDRITFNS 304
               + F H                              + + ++M+ N   PD  T+ +
Sbjct: 576 INEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTN 635

Query: 305 LLA-VCSRG-----------------------------------GLWEAARNLFNEMVHR 328
           L+A +C +G                                   G   AA  +F EM+++
Sbjct: 636 LIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNK 695

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            ++ D   +N ++D   +  +     +I++ M +KN+  N+ TY+ ++ GYAK   +   
Sbjct: 696 DVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARC 755

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             ++ +M   G   D+ S+++++  Y +   F+ A+ + + +   G   D  T+N L+  
Sbjct: 756 FMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITK 815

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           + ++ +  +   + +QM    V PN+ TY+ L +   +   + +A ++ +   ++G    
Sbjct: 816 FCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPT 875

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
              Y  LI+ +C+ G ++ A+ L DEM   GI  + V  ++I+     S   E
Sbjct: 876 NKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIE 928



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/424 (22%), Positives = 175/424 (41%), Gaps = 35/424 (8%)

Query: 356 IMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
           +M   P  N +P V  +  +I    +   + DA+  F  M F G+     + N VL    
Sbjct: 94  LMETYPICNSNPAV--FDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLV 151

Query: 416 KLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLL 475
           K  + +      K M + GI  D  T+N LL    ++GK+     +  +M+   V P  +
Sbjct: 152 KEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAV 211

Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
           TY+TL++ Y K G YK A Q+       G+  DV  Y+  ID LC++        LL  M
Sbjct: 212 TYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRM 271

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
            +  + PN +TYN++I  F R    E     V   +  +    NL               
Sbjct: 272 RRNMVYPNEITYNTLISGFVREGKIE-----VATKVFDEMSLFNL--------------- 311

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
              N I   +  L+A     G      R        +   M    ++PN VT+ A+LN  
Sbjct: 312 -LPNSI--TYNTLIAGHCTTGNIGEALR--------LMDVMVSHGLRPNEVTYGALLNGL 360

Query: 656 SRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTAS 713
            +   F   S +LE +R+   +V  +++  ++    ++ +  +A+ L D++  +  +   
Sbjct: 361 YKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDV 420

Query: 714 AFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARAMVHAWLL 773
             ++ L +  +  G+   A+ ++ +  +  +  N    S L  +    G  +  ++A+ +
Sbjct: 421 VTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAV 480

Query: 774 NIHS 777
             HS
Sbjct: 481 MNHS 484


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 187/370 (50%), Gaps = 14/370 (3%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           +F+ +I A  +  +   AI VF  M      P+  TY  ++D  C +  +D    V + D
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERID--EAVLLLD 246

Query: 289 DMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
           +M   G  P  + +N L+  +C +G L    + L + M  +G   +  TYNTL+  +C  
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTK-LVDNMFLKGCVPNEVTYNTLIHGLCLK 305

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            ++D A  ++  M +    PN VTY T+I+G  K  R  DA+ + S M+  G  L++  Y
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY 365

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
           + ++S   K G+ EEA+ + ++M   G + + V Y+ L+ G  ++GK +E + +  +M A
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
               PN  TYS+L+  + K GL +EA+Q+++E  + G   +   YS LID LC  G V+ 
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKE 485

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-------- 579
           A+ +  +M   GI+P+ V Y+SII       + +  +      L +++  +         
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI 545

Query: 580 -LDAMCSQDD 588
            LD +C Q D
Sbjct: 546 LLDGLCMQKD 555



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 195/442 (44%), Gaps = 41/442 (9%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKN--DQGKLASAMISILGRLGKVDLAKNIF 216
           +  +L  + N G + + ++ + + V      N    G   + +I  L +L  VD A  +F
Sbjct: 151 FNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVF 210

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
                       Y +  L+    +     EA+ + + M+     P+ V YN +ID   K 
Sbjct: 211 RGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKK 270

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA------------------ 317
           G D   V ++ D+M   G  P+ +T+N+L+  +C +G L +A                  
Sbjct: 271 G-DLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329

Query: 318 ----------------ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
                           A  L + M  RG   +   Y+ L+  + K  + + A  +  +M 
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389

Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
            K   PN+V YS ++DG  + G+ ++A  + + M   G   +  +Y++++  + K G  E
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
           EA+ V KEM+ +G  ++   Y+ L+ G    G+  E   ++ +M    + P+ + YS++I
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509

Query: 482 DVYSKGGLYKEAMQIFREF---KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
                 G    A++++ E    ++   + DVV Y+ L+D LC    +  AV LL+ M   
Sbjct: 510 KGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569

Query: 539 GIRPNVVTYNSIIDAFGRSATT 560
           G  P+V+T N+ ++     + +
Sbjct: 570 GCDPDVITCNTFLNTLSEKSNS 591



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 111/216 (51%), Gaps = 9/216 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S ++  L R GK + AK I    +  G     Y +S+L+  + ++G C+EA+ V+  M +
Sbjct: 401 SVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK 460

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
                N   Y+ +ID  CG G V  K  + ++  ML  G++PD + ++S++  +C  G +
Sbjct: 461 TGCSRNKFCYSVLIDGLCGVGRV--KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSM 518

Query: 315 WEAARNLFNEMVHRGIDQ---DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
            +AA  L++EM+ +   +   D+ TYN LLD +C    +  A +++  M  +   P+V+T
Sbjct: 519 -DAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577

Query: 372 YSTMIDGYA-KAGRLDDALNMFSEMKFLGIGLDRVS 406
            +T ++  + K+   D   +   E+    +   RVS
Sbjct: 578 CNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVS 613



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 147/340 (43%), Gaps = 33/340 (9%)

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
           + I  + +S+N V+    KL   + A+ V + M       D  TY  L+ G  K+ + DE
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              + ++M+++  SP+ + Y+ LID   K G      ++       G   + V Y+ LI 
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
            LC  G ++ AVSLL+ M      PN VTY ++I+                  L KQ+ +
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLING-----------------LVKQRRA 343

Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
            +   + S     ++E G   NQ   ++  L++    +GK E          + +++KM 
Sbjct: 344 TDAVRLLSS----MEERGYHLNQ--HIYSVLISGLFKEGKAEEA--------MSLWRKMA 389

Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWV 695
           +   KPN+V +S +++   R     +A  +L  +           +  LM   ++  +  
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449

Query: 696 QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLV 735
           +A+ ++ E+     S     Y+ L D L   G+ + A +V
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 489


>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 219/478 (45%), Gaps = 36/478 (7%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I +LG    +  A  IF          T +A++++I      G  ++   ++N M  
Sbjct: 159 SDIIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSN 218

Query: 257 Y-NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
                P+ VTY+A+I A C  G  D    + + ++M  NG+QP    +  L+A+  +   
Sbjct: 219 EGQCFPDTVTYSALISAFCKLGRQD--SAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDN 276

Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
              A  LF EM H+    D+FTY  L+  + K  ++D A+    EM  +   P+ V  + 
Sbjct: 277 VHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNN 336

Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL-SIYAKLGRFEEALLVCKEMESS 433
           MI+   KAGRLDDA+ +F EM+ L      V+YNT++ +++    R  E     + M+ S
Sbjct: 337 MINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGS 396

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI     TY+ L+ G+ K  + ++   + E+M      P    Y +LID   K   Y  A
Sbjct: 397 GISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 456

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
            ++F+E K+    +   +Y+ +I  L K G ++ AV L DEM + G  PNV  YN+++  
Sbjct: 457 NELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSG 516

Query: 554 FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
             R+   +  +  + R           D  C  D              I  +  ++   A
Sbjct: 517 LARAGMLDEALTTMRR---------MQDHGCIPD--------------INSYNIILNALA 553

Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             G  +          +G+   M +  IKP+ V+++ +L A S    FE+A+ L++E+
Sbjct: 554 KTGGPDR--------AMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEM 603



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 164/325 (50%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I  LG+ G++D A N F     EG        + +I+  G++G   +AI +F  M+ 
Sbjct: 300 TELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMET 359

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
               P++VTYN +I A  +       +   F+ M  +G+ P   T++ L+    +    E
Sbjct: 360 LRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTE 419

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  L  EM  +G       Y +L+DA+ K  + DLA E+  E+     S +   Y+ MI
Sbjct: 420 KAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMI 479

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
               KAGRLDDA+++F EM  LG   +  +YN ++S  A+ G  +EAL   + M+  G  
Sbjct: 480 KHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCI 539

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  +YN +L    K G  D    M   MK   + P+ ++Y+T++   S  G+++EA ++
Sbjct: 540 PDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKL 599

Query: 497 FREFKQAGLKADVVLYSALIDALCK 521
            +E    G   D++ YS++++A+ K
Sbjct: 600 MKEMNAIGFDYDLITYSSILEAIGK 624



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 185/367 (50%), Gaps = 6/367 (1%)

Query: 193 GKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFN 252
            K+ + ++++L +L  V  A  +FE   ++     V+ ++ LI   G++G   EA + F+
Sbjct: 261 AKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFH 320

Query: 253 SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVC--S 310
            M+R   +P+ V  N +I+  GK G      +++F++M      P  +T+N+++     S
Sbjct: 321 EMRREGCRPDTVLMNNMINFLGKAG-RLDDAIKLFEEMETLRCIPSVVTYNTIIKALFES 379

Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
           +  + E + + F  M   GI    FTY+ L+D  CK  + + A  ++ EM  K   P   
Sbjct: 380 KSRVSEIS-SWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPA 438

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKF-LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKE 429
            Y ++ID   KA R D A  +F E+K   G    RV Y  ++    K GR ++A+ +  E
Sbjct: 439 AYCSLIDALGKAKRYDLANELFQELKENCGSSSARV-YAVMIKHLGKAGRLDDAVDLFDE 497

Query: 430 MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL 489
           M   G   +   YNAL+ G  + G  DE      +M+     P++ +Y+ +++  +K G 
Sbjct: 498 MNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGG 557

Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
              AM +    KQ+ +K D V Y+ ++ AL   G+ E A  L+ EM   G   +++TY+S
Sbjct: 558 PDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSS 617

Query: 550 IIDAFGR 556
           I++A G+
Sbjct: 618 ILEAIGK 624



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 186/404 (46%), Gaps = 25/404 (6%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           L  E+ N G      QCF   V             SA+IS   +LG+ D A  +     +
Sbjct: 212 LYNEMSNEG------QCFPDTVT-----------YSALISAFCKLGRQDSAIWLLNEMKD 254

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
            G   T   ++ L++   +      A+ +F  M+    +P++ TY  +I   GK G    
Sbjct: 255 NGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAG-RLD 313

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
                F +M R G +PD +  N+++    + G  + A  LF EM        + TYNT++
Sbjct: 314 EAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTII 373

Query: 342 DAI----CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
            A+     + +++   FE    M    ISP+  TYS +IDG+ K  R + A+ +  EM  
Sbjct: 374 KALFESKSRVSEISSWFE---RMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDE 430

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G      +Y +++    K  R++ A  + +E++ +     A  Y  ++   GK G+ D+
Sbjct: 431 KGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 490

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +F++M     +PN+  Y+ L+   ++ G+  EA+   R  +  G   D+  Y+ +++
Sbjct: 491 AVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILN 550

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           AL K G  + A+ +L  M +  I+P+ V+YN+++ A   +   E
Sbjct: 551 ALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFE 594



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 151/357 (42%), Gaps = 77/357 (21%)

Query: 135 FARDDV--SLGDILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKN 190
           F  D+V  +LG + ++   + C  D +T+  L+R LG  G   +A   F   ++RE  + 
Sbjct: 272 FKLDNVHGALG-LFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYN-FFHEMRREGCRP 329

Query: 191 DQGKLASAMISILGRLGKVDLAKNIFE------------------TALNE---------- 222
           D   L + MI+ LG+ G++D A  +FE                   AL E          
Sbjct: 330 DT-VLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISS 388

Query: 223 --------GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
                   G   + + +S LI  + ++   ++A+ +   M      P    Y ++IDA G
Sbjct: 389 WFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALG 448

Query: 275 KG-------------------------GVDFKHV---------VEIFDDMLRNGVQPDRI 300
           K                           V  KH+         V++FD+M R G  P+  
Sbjct: 449 KAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVY 508

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
            +N+L++  +R G+ + A      M   G   DI +YN +L+A+ K    D A  ++  M
Sbjct: 509 AYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNM 568

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
               I P+ V+Y+T++   + AG  ++A  +  EM  +G   D ++Y+++L    K+
Sbjct: 569 KQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAIGKV 625



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 106/448 (23%), Positives = 186/448 (41%), Gaps = 49/448 (10%)

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM---PAKNISPNVVTYSTMIDGYAKAGR 384
           R  + D  TY  L+  +    Q    ++++ EM   P   ++P  +  S +I     A  
Sbjct: 113 RNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTP--MELSDIIRMLGNAKM 170

Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG-IRKDAVTYN 443
           +  A+ +F ++K         +YN+++ +    G +E+   +  EM + G    D VTY+
Sbjct: 171 ISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYS 230

Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
           AL+  + K G+ D    +  +MK + + P    Y+ L+ +  K      A+ +F E +  
Sbjct: 231 ALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQ 290

Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
             + DV  Y+ LI  L K G ++ A +   EM +EG RP+ V  N++I+  G++   +  
Sbjct: 291 YCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDA 350

Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
           +   E       E   L  + S           T N IIK   +               +
Sbjct: 351 IKLFE-------EMETLRCIPSV---------VTYNTIIKALFE--------------SK 380

Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAH 683
             +  I   F++M    I P+  T+S +++   + N  E A MLLEE+   D + +    
Sbjct: 381 SRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEM---DEKGFPPCP 437

Query: 684 GLLMGYRDNI-----WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLE 738
                  D +     +  A  LF E+K    S+++  Y  +   L   G+   A  +  E
Sbjct: 438 AAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDE 497

Query: 739 GKRRQVWENVWSESCLDLHLMSSGAARA 766
             R     NV++ + L      SG ARA
Sbjct: 498 MNRLGCTPNVYAYNAL-----MSGLARA 520


>gi|297820746|ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324094|gb|EFH54515.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 582

 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 202/387 (52%), Gaps = 11/387 (2%)

Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
           +I+  G+LG  + A+ +       G    V +++AL+ +YGR G C  A ++F  M+   
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204

Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML---RNGVQPDRITFNSLLAVCSRGGLW 315
            +P+ VTY  ++    +G   FK   E+F+ +L   ++ ++PD+  ++ ++ +  + G +
Sbjct: 205 PEPSAVTYQIILKTFVEGD-KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           + AR +F+ MV +G+ Q   TYN+L+       ++    +I  +M    I P+VV+Y+ +
Sbjct: 264 DKARKVFSSMVGKGVPQSTVTYNSLMSFETNYKEVS---KIYDQMQRSGIQPDVVSYALL 320

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I  Y +A R ++AL++F EM   G+     +YN +L  +A  G  E+A  V K M    I
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  +Y  +L  Y      +   + F+++K D   PN++TY T+I  Y+K    ++ M+
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDVEKMME 440

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
           ++ + + +G+KA+  + + ++DA  +     SA+    EM   G+ P+    N ++  + 
Sbjct: 441 VYEKMRLSGIKANQTILTTIMDASGRCKDFGSALGWYKEMESCGVPPDQKAKNVLLSLY- 499

Query: 556 RSATTECTVDDVERDLGKQKESANLDA 582
              +T+  +D+ +   G + E+A + A
Sbjct: 500 ---STQDELDEAKELTGLRNETATIVA 523



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 123/284 (43%), Gaps = 47/284 (16%)

Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
           FSEM FL           +++ Y KLG F  A  V   +   G   + ++Y AL+  YG+
Sbjct: 137 FSEMDFL----------MLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGR 186

Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF---KQAGLKAD 508
            GK +    +F +M++    P+ +TY  ++  + +G  +KEA ++F      K++ LK D
Sbjct: 187 GGKCNNAEAIFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPD 246

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
             +Y  +I    K G  + A  +   M  +G+  + VTYNS++       + E    +V 
Sbjct: 247 QKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNSLM-------SFETNYKEVS 299

Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
           +   + + S             +Q    +   +IK +G              R R+E   
Sbjct: 300 KIYDQMQRSG------------IQPDVVSYALLIKAYG--------------RARREEEA 333

Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            L VF++M    ++P    ++ +L+A +     E A  + + +R
Sbjct: 334 -LSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/289 (20%), Positives = 113/289 (39%), Gaps = 47/289 (16%)

Query: 475 LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDE 534
           + +  LI  Y K G +  A ++     + G   +V+ Y+AL+++  + G   +A ++   
Sbjct: 140 MDFLMLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCNNAEAIFRR 199

Query: 535 MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD-AMCSQDDKDVQE 593
           M   G  P+ VTY  I+  F      +   +  E  L ++K     D  M        ++
Sbjct: 200 MQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC--------ILGVFQKMHKLKIKPNV 645
           AG  D +  KVF  +V    G+G  ++      L         +  ++ +M +  I+P+V
Sbjct: 260 AGNYD-KARKVFSSMV----GKGVPQSTVTYNSLMSFETNYKEVSKIYDQMQRSGIQPDV 314

Query: 646 VTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVK 705
           V+++ ++ A  R    E                                 +ALS+F+E+ 
Sbjct: 315 VSYALLIKAYGRARREE---------------------------------EALSVFEEML 341

Query: 706 LMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
                     YN L D     G    A+ V    +R +++ ++WS + +
Sbjct: 342 DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 390


>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
 gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
 gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 203/400 (50%), Gaps = 6/400 (1%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y+ L+   G       A++ F     +E       K+ + ++ I  +LGKV+ A N+   
Sbjct: 234 YSALISAFGKLNRDDSAVRLFDEM--KENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHE 291

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                   TVY ++ LI   G+SG  ++A  V+ +M +   KP++V  N +I+  G+   
Sbjct: 292 MRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSD- 350

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
             K  VE+F++M      P+ +T+N+++ ++         A +    M   G+    FTY
Sbjct: 351 RLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTY 410

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
           + L+D  CK  +++ A  ++ EM  K   P    Y ++I+   KA R + A  +F E+K 
Sbjct: 411 SILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKE 470

Query: 398 -LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G    RV Y  ++  + K GRF EA+ +  EM+  G   D   YNAL+ G  +    D
Sbjct: 471 NCGSSSVRV-YAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMD 529

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
           E   +F  M+ +  +P++ +++ +++  ++ G  K AM++F + K + +K D V Y+ ++
Sbjct: 530 EAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVL 589

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             L + GL E A  L+ EM  +G   +++TY+SI++A G+
Sbjct: 590 GCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGK 629



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 195/399 (48%), Gaps = 38/399 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-K 255
           S ++ ILGR+  V+ A +IF          T   ++++I    + G+ ++   ++N M  
Sbjct: 164 SEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCS 223

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             +  P+ VTY+A+I A GK   D    V +FD+M  NG+QP    + +L+ +  + G  
Sbjct: 224 EGHCFPDTVTYSALISAFGKLNRD-DSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKV 282

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
           E A NL +EM  R     ++TY  L+  + K  +++ A+ +   M      P+VV  + +
Sbjct: 283 EEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNL 342

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL------------------------ 411
           I+   ++ RL +A+ +F EM+ L    + V+YNT++                        
Sbjct: 343 INILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDG 402

Query: 412 --------SI----YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
                   SI    + K  R E+ALL+ +EM+  G       Y +L+   GK  +Y+   
Sbjct: 403 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAAN 462

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +F+++K +C S ++  Y+ +I  + K G + EAM +F E K+ G   DV  Y+ALI  +
Sbjct: 463 ELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGM 522

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            +  +++ A SL   M + G  P++ ++N I++   R+ 
Sbjct: 523 VRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTG 561



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 1/221 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I    +  +V+ A  + E    +G+     A+ +LI++ G++   + A  +F  +K 
Sbjct: 411 SILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKE 470

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
                ++  Y  +I   GK G  F   + +F++M + G  PD   +N+L+    R  + +
Sbjct: 471 NCGSSSVRVYAVMIKHFGKCG-RFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMD 529

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +LF  M   G + DI ++N +L+ + +      A E+ A+M +  I P+ V+Y+T++
Sbjct: 530 EAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVL 589

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
              ++AG  ++A  +  EM   G   D ++Y+++L    K+
Sbjct: 590 GCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGKV 630



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 120/258 (46%), Gaps = 39/258 (15%)

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD- 468
           ++ I  ++    +AL +  +++    R  A TYN+++    ++G +++V  ++ +M ++ 
Sbjct: 166 IVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEG 225

Query: 469 -CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
            C  P+ +TYS LI  + K      A+++F E K+ GL+    +Y+ L+    K G VE 
Sbjct: 226 HCF-PDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEE 284

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
           A++L+ EM      P V TY  +I   G+S   E     V +++ K     ++  M    
Sbjct: 285 ALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVE-DAYGVYKNMLKDGCKPDVVLM---- 339

Query: 588 DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
                      N +I + G           + +R ++ +     +F++M  L   PNVVT
Sbjct: 340 -----------NNLINILG-----------RSDRLKEAV----ELFEEMRLLNCTPNVVT 373

Query: 648 FSAILNACSRCNSFEDAS 665
           ++ I+ +      FED +
Sbjct: 374 YNTIIKSL-----FEDKA 386



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 34/217 (15%)

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG-LKADVVLYSALIDAL 519
           +F Q+K     P   TY+++I +  + G +++  +++ E    G    D V YSALI A 
Sbjct: 182 IFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAF 241

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
            K    +SAV L DEM + G++P    Y +++  + +              LGK +E+ N
Sbjct: 242 GKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFK--------------LGKVEEALN 287

Query: 580 LDAMCSQDDKDVQEAG-RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
           L          V E   R     +  + +L+      G+ E+          GV++ M K
Sbjct: 288 L----------VHEMRMRRCVPTVYTYTELIRGLGKSGRVED--------AYGVYKNMLK 329

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 675
              KP+VV  + ++N   R +  ++A  L EE+RL +
Sbjct: 330 DGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLN 366


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 199/405 (49%), Gaps = 6/405 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    R  ++  A ++    +  GY  ++  F +L+  +       +A S+   M +
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              +PN+V YN +ID   K G +    +E+ ++M + G+  D +T+N+LL      G W 
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNG-ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  +  +M+ R I+ D+ T+  L+D   K   +D A E+  EM   ++ PN VTY+++I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G    GRL DA   F  M   G   + V+YNT++S + K    +E + + + M   G  
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            D  TYN L+ GY + GK      +F  M +  V+P+++T+  L+      G  + A+  
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           F + +++     +V Y+ +I  LCK   VE A  L   +  EG++P+  TY  +I    +
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468

Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
           +       D++ R   + KE   +  M ++DD  ++E   ++ +I
Sbjct: 469 NGPRR-EADELIR---RMKEEGIICQMNAEDDH-LEEHSSSNKEI 508



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 181/350 (51%), Gaps = 14/350 (4%)

Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA---CGKGGVD 279
           G  + +Y+F+ LI  + R      A+SV   M +   +P++VT+ +++       + G  
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
           F  V+     M+++G +P+ + +N+L+    + G    A  L NEM  +G+  D+ TYNT
Sbjct: 161 FSLVIL----MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           LL  +C   +   A  ++ +M  ++I+P+VVT++ +ID + K G LD+A  ++ EM    
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           +  + V+YN++++     GR  +A      M S G   + VTYN L+ G+ K    DE  
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
           ++F++M  +  + ++ TY+TLI  Y + G  + A+ IF       +  D++ +  L+  L
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           C NG +ESA+   D+M +      +V YN +I          C  D VE+
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL-------CKADKVEK 439



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 145/279 (51%)

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
           + F+    +F +M+ +   P  + F  LL   +    +E       +M   GI  D++++
Sbjct: 50  IRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSF 109

Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
             L+   C+ +++  A  ++ +M      P++VT+ +++ G+    R+ DA ++   M  
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169

Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
            G   + V YNT++    K G    AL +  EME  G+  D VTYN LL G    G++ +
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229

Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
             RM   M    ++P+++T++ LIDV+ K G   EA ++++E  Q+ +  + V Y+++I+
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
            LC +G +  A    D M  +G  PNVVTYN++I  F +
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 160/321 (49%), Gaps = 1/321 (0%)

Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
           ++A ++F  M      P++V +  ++ A       ++ V+     M   G+  D  +F  
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLR-RYETVIYFSQKMELYGISHDLYSFTI 111

Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
           L+    R      A ++  +M+  G +  I T+ +LL   C   ++  AF ++  M    
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
             PNVV Y+T+IDG  K G L+ AL + +EM+  G+G D V+YNT+L+     GR+ +A 
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            + ++M    I  D VT+ AL+  + KQG  DE + ++++M    V PN +TY+++I+  
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291

Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
              G   +A + F      G   +VV Y+ LI   CK  +V+  + L   M+ EG   ++
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351

Query: 545 VTYNSIIDAFGRSATTECTVD 565
            TYN++I  + +       +D
Sbjct: 352 FTYNTLIHGYCQVGKLRVALD 372



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 88/384 (22%), Positives = 169/384 (44%), Gaps = 38/384 (9%)

Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
           G+  + R +DA  +F EM         V +  +L+  A L R+E  +   ++ME  GI  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
           D  ++  L+  + +  +      +  +M      P+++T+ +L+  +       +A  + 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
               ++G + +VV+Y+ LID LCKNG +  A+ LL+EM K+G+  +VVTYN+++     S
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
                         G+  ++A +        +D+ +  R+ N  +  F  L+     QG 
Sbjct: 225 --------------GRWSDAARML-------RDMMK--RSINPDVVTFTALIDVFVKQGN 261

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASM---LLEELRLF 674
            +    QE+      +++M +  + PN VT+++I+N         DA     L+     F
Sbjct: 262 LDEA--QEL------YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313

Query: 675 DNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
            N V    + L+ G+ +  +  + + LF  +     +     YN L       G+ R A 
Sbjct: 314 PNVV--TYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371

Query: 734 LVVLEGKRRQVWENVWSESCLDLH 757
            +      R+V  ++ +  C+ LH
Sbjct: 372 DIFCWMVSRRVTPDIITH-CILLH 394


>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Glycine max]
          Length = 729

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 202/377 (53%), Gaps = 16/377 (4%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN---LKPNLVTYNA 268
           A   F+    +G+ +T  ++  ++   GR      A +   S+++++   +K     +N+
Sbjct: 94  ALRFFKWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNS 153

Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV-H 327
           +I +  + G+ FK  +++F  M    V P  +TFNSL+++  + G    A+ +++EM+  
Sbjct: 154 LIRSYAEAGL-FKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGT 212

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            G+  D  TYN L+   CK + +D  F    EM + N   +VVTY+T++DG  +AG++  
Sbjct: 213 YGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRI 272

Query: 388 ALNMFSEM--KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
           A N+ + M  K  G+  + V+Y T++  Y      EEAL+V +EM S G++ + +TYN L
Sbjct: 273 ARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTL 332

Query: 446 LGGYGKQGKYDEVRRMFEQMKAD-CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
           + G  +  K D+++ + E+MK+D   SP+  T++T+I ++   G   EA+++F   K+  
Sbjct: 333 VKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFR 392

Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDE-------MTKEGIRPNVVTYNSIIDAFGRS 557
           + AD   YS LI +LC+ G  + A  L DE       ++K G +P   +YN I ++    
Sbjct: 393 IPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEH 452

Query: 558 ATTECTVDDVERDLGKQ 574
             T+   + V R L K+
Sbjct: 453 GKTK-KAERVIRQLMKR 468



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 207/443 (46%), Gaps = 51/443 (11%)

Query: 160 TFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETA 219
           T +LR L    + SKA++ F +  ++      +      M+ ILGR   +++A+N   + 
Sbjct: 79  TTVLRTLRLIKDPSKALRFFKWTQQKGFSHTPESYFI--MLEILGRERNLNVARNFLFSI 136

Query: 220 LNEGYGNTVYA---FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
                G        F++LI +Y  +G  +E++ +F +MK   + P++VT+N+++    K 
Sbjct: 137 EKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKR 196

Query: 277 GVDFKHVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G       E++D+ML   GV PD  T+N L+    +  + +     F EM     D D+ 
Sbjct: 197 GRT-NMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVV 255

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAK--NISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           TYNTL+D +C+  ++ +A  ++  M  K   ++PNVVTY+T+I GY     +++AL +  
Sbjct: 256 TYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLE 315

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG-IRKDAVTYNALLGGYGKQ 452
           EM   G+  + ++YNT++    +  + ++   V + M+S G    D  T+N ++  +   
Sbjct: 316 EMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCA 375

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL------- 505
           G  DE  ++FE MK   +  +  +YSTLI    + G Y  A Q+F E  +  +       
Sbjct: 376 GNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGS 435

Query: 506 ---------------------KADVVL-------------YSALIDALCKNGLVESAVSL 531
                                KA+ V+             Y+ +I   CK G  ES   L
Sbjct: 436 KPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQSYTTVIMGHCKEGAYESGYEL 495

Query: 532 LDEMTKEGIRPNVVTYNSIIDAF 554
           L  M +    P++  Y+ +ID F
Sbjct: 496 LMWMLRRDFLPDIEIYDYLIDGF 518



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/408 (21%), Positives = 183/408 (44%), Gaps = 51/408 (12%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
           ++++SIL + G+ ++AK +++  L   G       ++ LI  + ++    E    F  M+
Sbjct: 187 NSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREME 246

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN--GVQPDRITFNSLL-AVCSRG 312
            +N   ++VTYN ++D   + G   +    + + M +   G+ P+ +T+ +L+   C + 
Sbjct: 247 SFNCDADVVTYNTLVDGLCRAG-KVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQ 305

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN-ISPNVVT 371
            + EA   +  EM  RG+  ++ TYNTL+  +C+  ++D   +++  M +    SP+  T
Sbjct: 306 EVEEALV-VLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFT 364

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR-----------F 420
           ++T+I  +  AG LD+AL +F  MK   I  D  SY+T++    + G            F
Sbjct: 365 FNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELF 424

Query: 421 EEALL-------------------------------VCKEMESSGIRKDAVTYNALLGGY 449
           E+ +L                               V +++   G  +D  +Y  ++ G+
Sbjct: 425 EKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGT-QDPQSYTTVIMGH 483

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            K+G Y+    +   M      P++  Y  LID + +      A +   +  ++  +   
Sbjct: 484 CKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKT 543

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV-VTYNSIIDAFGR 556
             + +++  L + G    +  ++  M ++ +R N+ ++  S+   FGR
Sbjct: 544 STWHSVLAKLLEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGR 591



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 22/358 (6%)

Query: 197 SAMISILGRLGKVDLAKNIFETALN--EGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + ++  L R GKV +A+N+        EG    V  ++ LI  Y      +EA+ V   M
Sbjct: 258 NTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEM 317

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRN-----GVQPDRITFNSLLAV- 308
               LKPN++TYN ++      G+   H ++   D+L       G  PD  TFN+++ + 
Sbjct: 318 TSRGLKPNMITYNTLVK-----GLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLH 372

Query: 309 CSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI--- 365
           C  G L EA + +F  M    I  D  +Y+TL+ ++C+    D+A ++  E+  K I   
Sbjct: 373 CCAGNLDEALK-VFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLS 431

Query: 366 ----SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
                P   +Y+ + +   + G+   A  +  ++   G   D  SY TV+  + K G +E
Sbjct: 432 KFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGHCKEGAYE 490

Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
               +   M       D   Y+ L+ G+ ++ K    +   E+M      P   T+ +++
Sbjct: 491 SGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVL 550

Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
               + G   E+  +     +  ++ ++ L +  +  L      E A  +++ + K G
Sbjct: 551 AKLLEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYKNG 608



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 106/232 (45%), Gaps = 30/232 (12%)

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE-F 500
           +N+L+  Y + G + E  ++F+ MK+  VSP+++T+++L+ +  K G    A +++ E  
Sbjct: 151 FNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEML 210

Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
              G+  D   Y+ LI   CKN +V+       EM       +VVTYN+++D   R+   
Sbjct: 211 GTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKV 270

Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
               + V   +GK+ E  N + +             T   +I+ +               
Sbjct: 271 RIARNLVN-GMGKKCEGLNPNVV-------------TYTTLIRGYCM------------- 303

Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
             +QE+   L V ++M    +KPN++T++ ++      +  +    +LE ++
Sbjct: 304 --KQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMK 353


>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 582

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 180/326 (55%), Gaps = 2/326 (0%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           + FS L+  Y +SG   ++I+VF  +    LKP+L     ++++  K  +    V +IF 
Sbjct: 134 HVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKERLT-DTVWKIFK 192

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
            M++ GV  +   +N L+  CS+ G  E A  L +EM  +G+  DIFTYNTL+   CK +
Sbjct: 193 KMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKS 252

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
               A  +   M    ++P++VTY+++I G+++ GR+ +A  +F ++K + +  + V+Y 
Sbjct: 253 MHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIKGVVMA-NHVTYT 311

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T++  Y ++   +EAL + + MES G     VTYN++L    + G+  E  R+  +M   
Sbjct: 312 TLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVK 371

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            + P+ +T +TLI+ Y K      A+++ ++  ++GLK D+  Y ALI   CK   +++A
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELDNA 431

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAF 554
              L  M ++G+ P    Y+ ++D F
Sbjct: 432 KEELFSMIEKGLSPGYSAYSWLVDGF 457



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 180/350 (51%), Gaps = 4/350 (1%)

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
           D    IF+  +  G    ++ ++ L+ A  +SG  ++A  + + M+   + P++ TYN +
Sbjct: 185 DTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTL 244

Query: 270 IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
           I    K  + F+  + + D M R+GV PD +T+NSL+   SR G    A  LF ++  +G
Sbjct: 245 ISVYCKKSMHFE-ALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKI--KG 301

Query: 330 IDQ-DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
           +   +  TY TL+D  C+   +D A  +   M ++   P VVTY++++    + GR+ +A
Sbjct: 302 VVMANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREA 361

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
             + +EM    I  D ++ NT+++ Y K+     A+ V K+M  SG++ D  +Y AL+ G
Sbjct: 362 NRLLTEMSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHG 421

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
           + K  + D  +     M    +SP    YS L+D +       E  ++  EF++ GL  D
Sbjct: 422 FCKVLELDNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNKQDEITKLPEEFEKRGLCPD 481

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           V LY  LI  +CK   V+ A  L + M K+G+  + V Y ++  A+ R+ 
Sbjct: 482 VALYRGLIRRICKLEQVDYAKVLFESMEKKGLMGDSVIYTTMAYAYWRTG 531



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 146/267 (54%), Gaps = 8/267 (2%)

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
            F+ L+   ++ G+   +  +F +++  G+   +     LL+++ K    D  ++I  +M
Sbjct: 135 VFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKERLTDTVWKIFKKM 194

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
               +  N+  Y+ ++   +K+G  + A  + SEM+  G+  D  +YNT++S+Y K    
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
            EAL V   ME SG+  D VTYN+L+ G+ ++G+  E  R+F ++K   V  N +TY+TL
Sbjct: 255 FEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIKG-VVMANHVTYTTL 313

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           ID Y +     EA+++    +  G    VV Y++++  LC++G +  A  LL EM+ + I
Sbjct: 314 IDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKKI 373

Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDV 567
            P+ +T N++I+A+       C ++D+
Sbjct: 374 EPDNITCNTLINAY-------CKIEDM 393



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 134/290 (46%), Gaps = 4/290 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +++I    R G++  A  +F         N V  ++ LI  Y R     EA+ +   M+ 
Sbjct: 277 NSLIHGFSREGRMREATRLFRKIKGVVMANHV-TYTTLIDGYCRMNDIDEALRLREVMES 335

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
               P +VTYN+++    + G   +    +  +M    ++PD IT N+L+ A C    + 
Sbjct: 336 RGFCPGVVTYNSILRKLCEDG-RIREANRLLTEMSVKKIEPDNITCNTLINAYCKIEDMV 394

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            A + +  +M+  G+  D+++Y  L+   CK  ++D A E +  M  K +SP    YS +
Sbjct: 395 SAVK-VKKKMIESGLKLDMYSYKALIHGFCKVLELDNAKEELFSMIEKGLSPGYSAYSWL 453

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +DG+    + D+   +  E +  G+  D   Y  ++    KL + + A ++ + ME  G+
Sbjct: 454 VDGFYNQNKQDEITKLPEEFEKRGLCPDVALYRGLIRRICKLEQVDYAKVLFESMEKKGL 513

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
             D+V Y  +   Y + GK  +   +F+ M    +  NL  Y +L   Y+
Sbjct: 514 MGDSVIYTTMAYAYWRTGKVTDASALFDVMYNRRLMVNLKLYKSLSASYA 563



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 123/277 (44%), Gaps = 36/277 (12%)

Query: 472 PNLLT--YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           P +L+  +S L+  Y+K G+  +++ +F +    GLK  +   + L+++L K  L ++  
Sbjct: 129 PEVLSHVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKERLTDTVW 188

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
            +  +M K G+  N+  YN ++ A  +S  +E      E+ L + +E            K
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDSE----KAEKLLSEMEE------------K 232

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI-LCILGVFQKMHKLKIKPNVVTF 648
            V     T N +I V+                C++ +    L V  +M +  + P++VT+
Sbjct: 233 GVFPDIFTYNTLISVY----------------CKKSMHFEALSVQDRMERSGVAPDIVTY 276

Query: 649 SAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY-RDNIWVQALSLFDEVKLM 707
           +++++  SR     +A+ L  +++      +     L+ GY R N   +AL L + ++  
Sbjct: 277 NSLIHGFSREGRMREATRLFRKIKGVVMANHVTYTTLIDGYCRMNDIDEALRLREVMESR 336

Query: 708 DSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQV 744
                   YN++   L   G+ R A  ++ E   +++
Sbjct: 337 GFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKKI 373


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 172/328 (52%), Gaps = 3/328 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V  ++ LI A        +A+ + + M     KP++VTYN +++  C +G +D    ++ 
Sbjct: 16  VITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLD--EAIKF 73

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
            + M   G QP+ IT N +L      G W  A  L  EMV +G    + T+N L++ +C+
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
              +  A +I+ +MP    +PN ++Y+ ++ G+ K  ++D A+     M   G   D V+
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNT+L+   K G+ + A+ +  ++ S G     +TYN ++ G  K GK D+   +  +M+
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              + P+++TYS+LI   S+ G  +EA++ F + +  G+K +   Y++++  LCK    +
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            A+  L  M  +G +P  V+Y  +I+  
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGI 341



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 169/307 (55%), Gaps = 5/307 (1%)

Query: 261 PNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAA 318
           P+++TY  +I+A C + GV     +++ D+M   G +PD +T+N L+  +C  G L EA 
Sbjct: 14  PDVITYTILIEATCAESGVG--QAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71

Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
           +   N M   G   ++ T+N +L ++C   +   A +++ EM  K  SP+VVT++ +I+ 
Sbjct: 72  K-FLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINF 130

Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
             + G L  A+++  +M   G   + +SYN +L  + K  + + A+   + M S G   D
Sbjct: 131 LCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPD 190

Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
            VTYN +L    K GK D    +  Q+ +   SP L+TY+T+ID  SK G   +A+++  
Sbjct: 191 IVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLH 250

Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
           E +  GLK DV+ YS+LI  L + G VE A+    ++   G++PN  TYNSI+    ++ 
Sbjct: 251 EMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQ 310

Query: 559 TTECTVD 565
            T+  +D
Sbjct: 311 QTDRAID 317



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 165/314 (52%), Gaps = 3/314 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V  ++ L++   + G   EAI   NSM  Y  +PN++T+N ++ + C  G   +    ++
Sbjct: 51  VVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTG--RWMDAEKL 108

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
             +M+R G  P  +TFN L+    R GL   A ++  +M   G   +  +YN LL   CK
Sbjct: 109 LTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCK 168

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
             +MD A + +  M ++   P++VTY+TM+    K G++D A+ + +++   G     ++
Sbjct: 169 EKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLIT 228

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           YNTV+   +K+G+ ++A+ +  EM   G++ D +TY++L+ G  ++GK +E  + F  ++
Sbjct: 229 YNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVE 288

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
              V PN  TY++++    K      A+         G K   V Y+ LI+ +   GL +
Sbjct: 289 GFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAK 348

Query: 527 SAVSLLDEMTKEGI 540
            A+ LL+E+   G+
Sbjct: 349 EALELLNELCSRGV 362



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 154/320 (48%), Gaps = 31/320 (9%)

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D+ TY  L++A C  + +  A +++ EM ++   P+VVTY+ +++G  K GRLD+A+   
Sbjct: 15  DVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFL 74

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
           + M   G   + +++N +L      GR+ +A  +  EM   G     VT+N L+    ++
Sbjct: 75  NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134

Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
           G       + E+M     +PN L+Y+ L+  + K      A+Q        G   D+V Y
Sbjct: 135 GLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTY 194

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG 572
           + ++ ALCK+G V++AV LL++++ +G  P ++TYN++ID   +   T+  V+ +    G
Sbjct: 195 NTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRG 254

Query: 573 KQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGV 632
           K                     G   + I   +  L+A  + +GK E   +         
Sbjct: 255 K---------------------GLKPDVI--TYSSLIAGLSREGKVEEAIK--------F 283

Query: 633 FQKMHKLKIKPNVVTFSAIL 652
           F  +    +KPN  T+++I+
Sbjct: 284 FHDVEGFGVKPNAFTYNSIM 303



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 147/321 (45%), Gaps = 31/321 (9%)

Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
            E++     K   P+V+TY+ +I+       +  A+ +  EM   G   D V+YN +++ 
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
             K GR +EA+     M S G + + +T+N +L      G++ +  ++  +M     SP+
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
           ++T++ LI+   + GL   A+ I  +    G   + + Y+ L+   CK   ++ A+  L+
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 534 EMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQE 593
            M   G  P++VTYN+++ A  +    +  V+ + + L  +  S  L    +  D  + +
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQ-LSSKGCSPVLITYNTVID-GLSK 238

Query: 594 AGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILN 653
            G+TD  +     +L+ E  G+G                        +KP+V+T+S+++ 
Sbjct: 239 VGKTDQAV-----ELLHEMRGKG------------------------LKPDVITYSSLIA 269

Query: 654 ACSRCNSFEDASMLLEELRLF 674
             SR    E+A     ++  F
Sbjct: 270 GLSREGKVEEAIKFFHDVEGF 290



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 9/284 (3%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           +  +LR + + G W  A +     V    RK     + +   +I+ L R G +  A +I 
Sbjct: 89  HNIILRSMCSTGRWMDAEKLLTEMV----RKGCSPSVVTFNILINFLCRKGLLGRAIDIL 144

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
           E     G      +++ L+  + +      AI     M      P++VTYN ++ A C  
Sbjct: 145 EKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKD 204

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
           G VD    VE+ + +   G  P  IT+N+++   S+ G  + A  L +EM  +G+  D+ 
Sbjct: 205 GKVD--AAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVI 262

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           TY++L+  + +  +++ A +   ++    + PN  TY++++ G  KA + D A++  + M
Sbjct: 263 TYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYM 322

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
              G     VSY  ++   A  G  +EAL +  E+ S G+ K +
Sbjct: 323 ISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKS 366


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 236/482 (48%), Gaps = 29/482 (6%)

Query: 232  SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDM 290
            +AL+ ++ R G   EA      M R  +  ++ ++N +ID+ C +G V       ++D+M
Sbjct: 548  NALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNV--LEAFSVYDNM 605

Query: 291  LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
            +R+G  PD  T+ SLL    +GG    A+     ++ +    D  T NTLL  ICK   +
Sbjct: 606  VRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTL 665

Query: 351  DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
            D A ++  +M  +NI P+  TY+ ++DG+ K G++  AL +   M   G+  D ++Y  +
Sbjct: 666  DEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCL 725

Query: 411  LSIYAKLGRFEEAL-----LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
            L+     G+ + A      ++CKE    G+  D + YN+++ GY K G+ +E+ R+   M
Sbjct: 726  LNGLVNEGQVKAASYMFQEIICKE----GLYADCIAYNSMMNGYLKGGQINEIERLMRNM 781

Query: 466  KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
              + V P+  +Y+ L+  Y K G     + ++R+  + G+K D V Y  LI  LC+ GL+
Sbjct: 782  HENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLI 841

Query: 526  ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCS 585
            E AV  L++M  EG+ P+ + ++ +I AF   +     + +  +     K   ++D    
Sbjct: 842  EIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKS----KMSNALQLFSYMKWVGDIDG-AF 896

Query: 586  QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNV 645
            +  +D++  G   +++ +    +V      GK E          + VF  + +  + P +
Sbjct: 897  ELKEDMKALGVVPSEVAE--SSIVRGLCKCGKVEEA--------IIVFSSIMRAGMVPTI 946

Query: 646  VTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDN--IWVQALSLFDE 703
             TF+ +++   +    +DA  L + +     +V  V + +L+    N      AL L++E
Sbjct: 947  ATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEE 1006

Query: 704  VK 705
            +K
Sbjct: 1007 MK 1008



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 186/348 (53%), Gaps = 2/348 (0%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           GK+  A+++ +   N    N V  ++ +++ Y + G C+ A+ + + M++  ++ +L TY
Sbjct: 244 GKLSKAESMLQKMKNCRLPNAV-TYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTY 302

Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
           N +ID   K     +  + +   M    + PD  ++N+L+      G    A  +FN+M+
Sbjct: 303 NIMIDKLCKLKRSARAYL-LLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQML 361

Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
            + +   + TY  L+D  C+  + D A  ++ EM    + P+ +TYS +++GY K  +L 
Sbjct: 362 RQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLG 421

Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
            AL++   ++   I ++R  Y  ++  + +LG   +A  + K M + GI  D +TY+AL+
Sbjct: 422 PALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALI 481

Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
            G  K G   E + +  +M+   V PN + Y+TL+  + K G  KEA++ F +  ++GL 
Sbjct: 482 NGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLV 541

Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           A+ V+++AL+ +  + G++  A      M++  I  +V ++N IID++
Sbjct: 542 ANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSY 589



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 195/395 (49%), Gaps = 51/395 (12%)

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
           ++N   P+ +T+N++L    + G  ++A  + ++M   GI+ D++TYN ++D +CK  + 
Sbjct: 256 MKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRS 315

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
             A+ ++  M   N++P+  +Y+T+I G+   G+++ A+ +F++M    +     +Y  +
Sbjct: 316 ARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTAL 375

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +  Y + GR +EA  V  EM+ +G+R   +TY+ALL GY K  K      + + +++  +
Sbjct: 376 IDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSI 435

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
           S N   Y+ LID + + G   +A QI +     G+  DV+ YSALI+ +CK G++     
Sbjct: 436 SINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKE 495

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKD 590
           +L  M K G+ PN V Y +++  F ++              G  KE+            D
Sbjct: 496 ILSRMQKSGVLPNNVLYTTLVFYFCKA--------------GHAKEALKYFV-------D 534

Query: 591 VQEAGRTDNQII------KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
           +  +G   N +I        + + +  +A Q K                Q M ++KI  +
Sbjct: 535 IYRSGLVANSVIHNALLCSFYREGMIAEAEQFK----------------QYMSRMKISFD 578

Query: 645 VVTFSAILNA-CSRCNSFEDASMLLEELRLFDNQV 678
           V +F+ I+++ C R N       +LE   ++DN V
Sbjct: 579 VASFNCIIDSYCQRGN-------VLEAFSVYDNMV 606



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 177/341 (51%), Gaps = 2/341 (0%)

Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
            + +L+  +   V   + ++++    G   +A S+   MK   L PN VTYN +++   K
Sbjct: 218 LKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVK 276

Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
            G   K  + I DDM +NG++ D  T+N ++    +      A  L   M    +  D  
Sbjct: 277 KG-RCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDEC 335

Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
           +YNTL+       +++LA  I  +M  +++ P+V TY+ +IDGY + GR D+A  +  EM
Sbjct: 336 SYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEM 395

Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
           +  G+    ++Y+ +L+ Y K  +   AL + K + S  I  +   Y  L+ G+ + G+ 
Sbjct: 396 QITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEV 455

Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
            + +++ + M AD + P+++TYS LI+   K G+  E  +I    +++G+  + VLY+ L
Sbjct: 456 SKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTL 515

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
           +   CK G  + A+    ++ + G+  N V +N+++ +F R
Sbjct: 516 VFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYR 556



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 187/417 (44%), Gaps = 49/417 (11%)

Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
           + + +I    +LG+V  AK I +  L +G    V  +SALI+   + G   E   + + M
Sbjct: 441 MYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRM 500

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-------- 306
           ++  + PN V Y  ++    K G   K  ++ F D+ R+G+  + +  N+LL        
Sbjct: 501 QKSGVLPNNVLYTTLVFYFCKAG-HAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGM 559

Query: 307 ----------------------------AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                                       + C RG + EA  ++++ MV  G   DI TY 
Sbjct: 560 IAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAF-SVYDNMVRHGWPPDICTYG 618

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
           +LL  +C+G  +  A E M  +  K  + +  T +T++ G  K G LD+AL++  +M   
Sbjct: 619 SLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTR 678

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
            I  D  +Y  +L  + K G+   AL++ + M   G+  D + Y  LL G   +G+    
Sbjct: 679 NILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAA 738

Query: 459 RRMFEQ------MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLY 512
             MF++      + ADC++     Y+++++ Y KGG   E  ++ R   +  +      Y
Sbjct: 739 SYMFQEIICKEGLYADCIA-----YNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASY 793

Query: 513 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
           + L+    K G +   + L  +M KEGI+P+ VTY  +I         E  V  +E+
Sbjct: 794 NILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEK 850



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/480 (24%), Positives = 223/480 (46%), Gaps = 35/480 (7%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
           +++ LI  +   G    AI +FN M R +LKP++ TY A+ID  C  G  D      +  
Sbjct: 336 SYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTD--EARRVLY 393

Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
           +M   GV+P  +T+++LL    +      A +L   +  R I  +   Y  L+D  C+  
Sbjct: 394 EMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLG 453

Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
           ++  A +I+  M A  I P+V+TYS +I+G  K G + +   + S M+  G+  + V Y 
Sbjct: 454 EVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYT 513

Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
           T++  + K G  +EAL    ++  SG+  ++V +NALL  + ++G   E  +  + M   
Sbjct: 514 TLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRM 573

Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
            +S ++ +++ +ID Y + G   EA  ++    + G   D+  Y +L+  LC+ G +  A
Sbjct: 574 KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQA 633

Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ------KESANLDA 582
              +  + ++    +  T N+++    +  T +  +D  E+ + +         +  LD 
Sbjct: 634 KEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDG 693

Query: 583 MCSQDD--------KDVQEAGRTDNQIIK--VFGQLVAEKAGQGKKENRCRQEILCILGV 632
            C +          + + E G   + I    +   LV E  GQ K  +   QEI+C  G+
Sbjct: 694 FCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNE--GQVKAASYMFQEIICKEGL 751

Query: 633 FQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVY--GVAHGLLM-GY 689
           +          + + +++++N   +     +   L+  +   +N+VY    ++ +LM GY
Sbjct: 752 Y---------ADCIAYNSMMNGYLKGGQINEIERLMRNMH--ENEVYPSSASYNILMHGY 800



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/477 (22%), Positives = 216/477 (45%), Gaps = 21/477 (4%)

Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
           G+   A  I +     G    +Y ++ +I    +      A  +   M+  NL P+  +Y
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 267 NAVIDAC-GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
           N +I    G+G ++    + IF+ MLR  ++P   T+ +L+    R G  + AR +  EM
Sbjct: 338 NTLIHGFFGEGKINL--AIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEM 395

Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
              G+     TY+ LL+  CK +++  A +++  + +++IS N   Y+ +IDG+ + G +
Sbjct: 396 QITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEV 455

Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
             A  +   M   GI  D ++Y+ +++   K+G   E   +   M+ SG+  + V Y  L
Sbjct: 456 SKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTL 515

Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
           +  + K G   E  + F  +    +  N + ++ L+  + + G+  EA Q  +   +  +
Sbjct: 516 VFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKI 575

Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA----TTE 561
             DV  ++ +ID+ C+ G V  A S+ D M + G  P++ TY S++    +        E
Sbjct: 576 SFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKE 635

Query: 562 CTVDDVERDLGKQKESAN--LDAMCSQ----DDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
             V  +E+     +++ N  L  +C      +  D+ E   T N +   +   +      
Sbjct: 636 FMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTIL----- 690

Query: 616 GKKENRC-RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
              +  C R +++  L + Q M +  + P+ + ++ +LN        + AS + +E+
Sbjct: 691 --LDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI 745



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 169/384 (44%), Gaps = 55/384 (14%)

Query: 231  FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDD 289
             + L+    + G   EA+ +   M   N+ P+  TY  ++D  C +G V     + +   
Sbjct: 652  LNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKV--VPALILLQM 709

Query: 290  MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR-GIDQDIFTYNTLLDAICKGA 348
            ML  G+ PD I +  LL      G  +AA  +F E++ + G+  D   YN++++   KG 
Sbjct: 710  MLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGG 769

Query: 349  QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
            Q++    +M  M    + P+  +Y+ ++ GY K G+L   L ++ +M   GI  D V+Y 
Sbjct: 770  QINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYR 829

Query: 409  TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF------ 462
             ++    + G  E A+   ++M   G+  D + ++ L+  + ++ K     ++F      
Sbjct: 830  LLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWV 889

Query: 463  ----------EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF--------------- 497
                      E MKA  V P+ +  S+++    K G  +EA+ +F               
Sbjct: 890  GDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATF 949

Query: 498  --------REFK------------QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
                    +EFK              GLK DVV Y+ LI  LC    +  A+ L +EM  
Sbjct: 950  TTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKS 1009

Query: 538  EGIRPNVVTYNSIIDAFGRSATTE 561
            +G+ PN+ TY ++  A   + T +
Sbjct: 1010 KGLLPNITTYITLTGAMYATGTMQ 1033



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 113/514 (21%), Positives = 210/514 (40%), Gaps = 70/514 (13%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           +A+I    R G+ D A+ +       G   +   +SAL++ Y +      A+ +   ++ 
Sbjct: 373 TALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRS 432

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
            ++  N   Y  +ID  C  G V      +I   ML +G+ PD IT+++L+    + G+ 
Sbjct: 433 RSISINRTMYTILIDGFCQLGEVS--KAKQILKCMLADGIDPDVITYSALINGMCKMGMI 490

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
              + + + M   G+  +   Y TL+   CK      A +   ++    +  N V ++ +
Sbjct: 491 HETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNAL 550

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           +  + + G + +A      M  + I  D  S+N ++  Y + G   EA  V   M   G 
Sbjct: 551 LCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGW 610

Query: 436 RKDAVTY-----------------------------------NALLGGYGKQGKYDEVRR 460
             D  TY                                   N LL G  K G  DE   
Sbjct: 611 PPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALD 670

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           + E+M    + P+  TY+ L+D + K G    A+ + +   + GL  D + Y+ L++ L 
Sbjct: 671 LCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLV 730

Query: 521 KNGLVESAVSLLDE-MTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
             G V++A  +  E + KEG+  + + YNS+++ + +       ++++ER +    E+  
Sbjct: 731 NEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGG----QINEIERLMRNMHEN-- 784

Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
                     +V  +  + N  I + G +   K GQ  +           L +++ M K 
Sbjct: 785 ----------EVYPSSASYN--ILMHGYI---KKGQLSRT----------LYLYRDMVKE 819

Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
            IKP+ VT+  ++         E A   LE++ L
Sbjct: 820 GIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVL 853



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 171/364 (46%), Gaps = 20/364 (5%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIF-E 217
            YT LL     RG+   A+      +++    +      + +++ L   G+V  A  +F E
Sbjct: 687  YTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIA--YTCLLNGLVNEGQVKAASYMFQE 744

Query: 218  TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
                EG      A++++++ Y + G   E   +  +M    + P+  +YN ++    K G
Sbjct: 745  IICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKG 804

Query: 278  VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
                  + ++ DM++ G++PD +T+  L+      GL E A     +MV  G+  D   +
Sbjct: 805  -QLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAF 863

Query: 338  NTLLDAICKGAQM----------------DLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
            + L+ A  + ++M                D AFE+  +M A  + P+ V  S+++ G  K
Sbjct: 864  DILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCK 923

Query: 382  AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
             G++++A+ +FS +   G+     ++ T++    K  + ++A  + + MES G++ D VT
Sbjct: 924  CGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVT 983

Query: 442  YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
            YN L+ G   +    +   ++E+MK+  + PN+ TY TL       G  ++  ++ ++ +
Sbjct: 984  YNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIE 1043

Query: 502  QAGL 505
              G+
Sbjct: 1044 DRGI 1047



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 152/355 (42%), Gaps = 62/355 (17%)

Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
           N+ +   +++ Y K G++ DA      M   G      S N +L+    + + E   L  
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFL 218

Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
           KE        D  T N +L     QGK  +   M ++MK +C  PN +TY+T+++ Y K 
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK-NCRLPNAVTYNTILNWYVKK 277

Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCK-------------------------- 521
           G  K A++I  + ++ G++AD+  Y+ +ID LCK                          
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 522 ---------NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLG 572
                     G +  A+ + ++M ++ ++P+V TY ++ID + R+  T    D+  R L 
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRT----DEARRVLY 393

Query: 573 KQK----------ESANLDAMCSQDD----KDVQEAGRTDN-QIIKVFGQLVAEKAGQGK 617
           + +           SA L+  C         D+ +  R+ +  I +    ++ +   Q  
Sbjct: 394 EMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLG 453

Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           + ++ +Q + C+L          I P+V+T+SA++N   +     +   +L  ++
Sbjct: 454 EVSKAKQILKCMLAD-------GIDPDVITYSALINGMCKMGMIHETKEILSRMQ 501



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 96/184 (52%), Gaps = 9/184 (4%)

Query: 190  NDQGKLASAM--ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEA 247
            +++ K+++A+   S +  +G +D A  + E     G   +  A S+++    + G  +EA
Sbjct: 871  SEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEA 930

Query: 248  ISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFK-HVVEIFDDMLRNGVQPDRITFNSL 305
            I VF+S+ R  + P + T+  ++   C +  +D   H+ ++ +     G++ D +T+N L
Sbjct: 931  IIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESC---GLKVDVVTYNVL 987

Query: 306  L-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
            +  +C++  + +A  +L+ EM  +G+  +I TY TL  A+     M    +++ ++  + 
Sbjct: 988  ITGLCNKKCICDAL-DLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRG 1046

Query: 365  ISPN 368
            I P+
Sbjct: 1047 IVPS 1050


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 182/337 (54%), Gaps = 12/337 (3%)

Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIF 287
           + F+ ++S+  ++      IS+F   +   + P+L T + +I+  C +  +       +F
Sbjct: 59  FLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITL--AFSVF 116

Query: 288 DDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF--NEMVHRGIDQDIFTYNTLLDAI 344
            ++L+ G  PD IT N+L+  +C RG   E  + L+  +++V +G   D  +Y TL++ +
Sbjct: 117 ANILKRGFHPDAITLNTLIKGLCFRG---EIKKTLYFHDQVVAQGFQLDQVSYGTLINGL 173

Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
           CK  +      ++ ++   ++ P+VV Y+T+I+   K   L DA +++SEM   GI  D 
Sbjct: 174 CKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDV 233

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK---YDEVRRM 461
           V+Y T++  +  +G+ +EA  +  EM+   I  D  T++ L+   GK+GK    DE   +
Sbjct: 234 VTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSL 293

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           FE+MK   + P+++TY++LID   K    + A+ + +E K+ G++ DV  Y+ L+D LCK
Sbjct: 294 FEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCK 353

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
            G +E A      +  +G   NV  YN +I+   ++ 
Sbjct: 354 GGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAG 390



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 181/345 (52%), Gaps = 6/345 (1%)

Query: 214 NIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA- 272
           ++F+     G    +   S LI+ +    +   A SVF ++ +    P+ +T N +I   
Sbjct: 79  SLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGL 138

Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
           C +G  + K  +   D ++  G Q D++++ +L+    + G  +A   L  ++    +  
Sbjct: 139 CFRG--EIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKP 196

Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
           D+  YNT+++++CK   +  A ++ +EM  K ISP+VVTY+T+I G+   G++ +A ++ 
Sbjct: 197 DVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLL 256

Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGR---FEEALLVCKEMESSGIRKDAVTYNALLGGY 449
           +EMK   I  D  +++ ++    K G+    +EA+ + +EM+   +  D VTYN+L+ G 
Sbjct: 257 NEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGL 316

Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
            K    +    + ++MK   + P++ +Y+ L+D   KGG  + A + F+     G   +V
Sbjct: 317 CKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNV 376

Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
             Y+ +I+ LCK GL   A+ L  +M  +G  PN +T+ +II A 
Sbjct: 377 WPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICAL 421



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 173/347 (49%), Gaps = 4/347 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +I+       + LA ++F   L  G+       + LI      G  ++ +   + +  
Sbjct: 97  SILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVA 156

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              + + V+Y  +I+   K G + K V  +   +  + V+PD + +N+++    +  L  
Sbjct: 157 QGFQLDQVSYGTLINGLCKAG-ETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLG 215

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A ++++EM+ +GI  D+ TY TL+   C   +M  AF ++ EM  KNI+P+V T+S +I
Sbjct: 216 DACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLI 275

Query: 377 DGYAKAGR---LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
           D   K G+   +D+A+++F EMK   +  D V+YN+++    K    E A+ + KEM+  
Sbjct: 276 DALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEH 335

Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
           GI+ D  +Y  LL G  K G+ +  +  F+ +       N+  Y+ +I+   K GL+ EA
Sbjct: 336 GIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEA 395

Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
           M +  + +  G   + + +  +I AL +    + A  +L EM   G+
Sbjct: 396 MDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 197/422 (46%), Gaps = 36/422 (8%)

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
           H V  F+ ML     P    FN++L+   +   +    +LF +    GI  D+ T + L+
Sbjct: 41  HAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 100

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
           +  C  A + LAF + A +  +   P+ +T +T+I G    G +   L    ++   G  
Sbjct: 101 NCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQ 160

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
           LD+VSY T+++   K G  +    + +++E   ++ D V YN ++    K     +   +
Sbjct: 161 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDV 220

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           + +M    +SP+++TY+TLI  +   G  KEA  +  E K   +  DV  +S LIDAL K
Sbjct: 221 YSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGK 280

Query: 522 NG---LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKE 576
            G   +V+ A+SL +EM  + + P++VTYNS+ID   ++   E  +  ++  ++ G Q +
Sbjct: 281 EGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPD 340

Query: 577 SAN----LDAMCSQDDKDVQEAGRTDNQIIKVFGQ-LVAEKAGQGKKENRCRQEILCILG 631
             +    LD +C        + GR   +I K F Q L+ +               LC  G
Sbjct: 341 VYSYTILLDGLC--------KGGRL--EIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAG 390

Query: 632 VFQKMHKLKIK-------PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHG 684
           +F +   LK K       PN +TF  I+ A S  +  + A  +L E+         +A G
Sbjct: 391 LFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREM---------IARG 441

Query: 685 LL 686
           LL
Sbjct: 442 LL 443



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 125/231 (54%), Gaps = 6/231 (2%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A +++   + +G    V  ++ LI  +   G  +EA S+ N MK  N+ P++ T++ +ID
Sbjct: 217 ACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLID 276

Query: 272 ACGKGG----VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
           A GK G    VD    + +F++M    + PD +T+NSL+    +    E A  L  EM  
Sbjct: 277 ALGKEGKKKMVD--EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKE 334

Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
            GI  D+++Y  LLD +CKG ++++A E    +  K    NV  Y+ MI+G  KAG   +
Sbjct: 335 HGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGE 394

Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
           A+++ S+M+  G   + +++ T++   ++    ++A  + +EM + G+ K+
Sbjct: 395 AMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGLLKE 445



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/321 (22%), Positives = 136/321 (42%), Gaps = 42/321 (13%)

Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
           +N +L    K  +Y  V  +F+Q + + ++P+L T S LI+ +        A  +F    
Sbjct: 61  FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 120

Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           + G   D +  + LI  LC  G ++  +   D++  +G + + V+Y ++I+   ++  T+
Sbjct: 121 KRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETK 180

Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENR 621
                V R L K             +   V+      N II                 + 
Sbjct: 181 A----VARLLRKL------------EGHSVKPDVVMYNTII----------------NSL 208

Query: 622 CRQEIL---CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL--FDN 676
           C+ ++L   C   V+ +M    I P+VVT++ +++        ++A  LL E++L   + 
Sbjct: 209 CKNKLLGDAC--DVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINP 266

Query: 677 QVYGVA---HGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
            VY  +     L    +  +  +A+SLF+E+K  +       YN+L D L        A 
Sbjct: 267 DVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAI 326

Query: 734 LVVLEGKRRQVWENVWSESCL 754
            ++ E K   +  +V+S + L
Sbjct: 327 ALLKEMKEHGIQPDVYSYTIL 347


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 189/394 (47%), Gaps = 31/394 (7%)

Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
            MI  LGR  ++D    + +    E    +   F  +I  Y RS   ++ + +F  ++ +
Sbjct: 79  TMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREF 138

Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
             +P++  YN V+DA     + FK +  ++++M   G++P+  T+N LL    + G  + 
Sbjct: 139 GCEPSVKIYNLVLDALLSQNL-FKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDG 197

Query: 318 ARNLFNEMVHRGIDQD------------------------------IFTYNTLLDAICKG 347
           A  L  EM ++G D D                              +  YN L+  +CK 
Sbjct: 198 ACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGVCKE 257

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
            +   AF++M EM  + + PNV++YST+I   +  G ++ +L +F  M   G   +  ++
Sbjct: 258 CRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTF 317

Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
            +++  +   GR  +A+ +   M   G+  + V YN L+ G    G  DE   ++ QM+ 
Sbjct: 318 TSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEK 377

Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
           D + PN+ TYST+I  ++K G    A + + +    G + +VV+Y+ ++D LC+  + + 
Sbjct: 378 DSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQ 437

Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
           A  L+D M  +G  P V+T+N+ I    R+   E
Sbjct: 438 AFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVE 471



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 191/360 (53%), Gaps = 4/360 (1%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           S +IS L  +G V+L+  +F      G    V  F++LI  +   G   +A+ ++N M R
Sbjct: 283 STVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIR 342

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
             + PN+V YN +I   C  G +D    + +++ M ++ ++P+  T+++++   ++ G  
Sbjct: 343 EGVSPNVVAYNTLIHGLCSDGNMD--EAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDL 400

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
            +A   +N+M++ G   ++  Y  ++D +C+ +  D AF+++  M +    P V+T++  
Sbjct: 401 VSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNF 460

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I G  +AGR++ A+N+  +M+      +  +YN +L    +   F EA  + +E+E   +
Sbjct: 461 IKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKV 520

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D VTYN ++ G+   G + +V ++  +M  + +  + +T +T ++ Y K G  K A++
Sbjct: 521 EFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIK 580

Query: 496 IFREFK-QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           +      +   +AD++ ++ ++  +C     E AV  L EM K GI PN+ T+N ++  F
Sbjct: 581 VLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGF 640



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 234/507 (46%), Gaps = 25/507 (4%)

Query: 59  PRNAPKPAATSTTVAPNPKPFHSLSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMS 118
           PR +P P   +T   PNP+  +SL+  P S+S +      R+    VS + + +      
Sbjct: 13  PRKSPTPFVLATN--PNPEKANSLNVCPVSESHVVKVL--RQEHDIVSSLEYFKSLSNSG 68

Query: 119 T-RHSVVAEEALHHVTAFAR----DDVSLGDILKKFEFKLCGADDYTFLLR--ELGNRGE 171
           T +H+ +  E +  +    R    D VS      K E   C  + + F+++     N GE
Sbjct: 69  TFKHTHLTYETM--IDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGE 126

Query: 172 WSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAF 231
               +    F   RE       K+ + ++  L       +   ++    +EG    V+ +
Sbjct: 127 QGLKM----FYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTY 182

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDM 290
           + L+ A  ++G    A  +   M      P+ V+Y  VI + C  G VD    + +    
Sbjct: 183 NVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAM---- 238

Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
                +P    +N+L+    +   ++ A +L NEMV RG+D ++ +Y+T++  +     +
Sbjct: 239 ---KFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNV 295

Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
           +L+  +   M  +   PNV T++++I G+   GR+ DA+ +++ M   G+  + V+YNT+
Sbjct: 296 ELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTL 355

Query: 411 LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
           +      G  +EA+ V  +ME   IR +  TY+ ++ G+ K G        + +M     
Sbjct: 356 IHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGC 415

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
            PN++ Y+ ++DV  +  ++ +A  +       G    V+ ++  I  LC+ G VE A++
Sbjct: 416 RPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMN 475

Query: 531 LLDEMTKEGIRPNVVTYNSIIDAFGRS 557
           +LD+M K    PN+ TYN ++D   R+
Sbjct: 476 VLDQMEKYECLPNIRTYNELLDGLFRA 502



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 210/415 (50%), Gaps = 17/415 (4%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
           Y  LL+ L   G+   A +     V+   +  D   ++ + +IS + +LG VD A+   E
Sbjct: 182 YNVLLKALCQNGKVDGACK---LLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKAR---E 235

Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
            A+   +   V  ++ALI    +    +EA  + N M    + PN+++Y+ VI      G
Sbjct: 236 LAMK--FEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMG 293

Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
            + +  + +F  M   G +P+  TF SL+     RG + +A   L+N M+  G+  ++  
Sbjct: 294 -NVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAV-GLWNLMIREGVSPNVVA 351

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           YNTL+  +C    MD A  +  +M   +I PNV TYST+I G+AK+G L  A   +++M 
Sbjct: 352 YNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMI 411

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G   + V Y  ++ +  ++  F++A  +   M S G     +T+N  + G  + G+ +
Sbjct: 412 NCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVE 471

Query: 457 EVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
               + +QM K +C+ PN+ TY+ L+D   +   ++EA  + RE ++  ++ D V Y+ +
Sbjct: 472 WAMNVLDQMEKYECL-PNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTI 530

Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDV 567
           +     NG+ +  + LL +M   GI+ + +T N+ ++A+   G+  T    +D++
Sbjct: 531 MYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNI 585


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 218/453 (48%), Gaps = 50/453 (11%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           +  F+ ++ +  +      AIS+   M+   ++ N VT N +I+  C  G + F     +
Sbjct: 10  IIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSF--SV 67

Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
              +L+ G QPD IT N+L+  +C +G + + + +  +++V +G   D  +Y TLL+ +C
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEV-KKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
           K  +   A +++  +  ++  PNVV Y+T+IDG  K   +++A +++SEM   GI  D +
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           +Y T++  +  LG+   A  +  EM    I      YN L+    K+G   E + +   M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
             + + P ++TYSTL+D Y   G  + A QIF    Q G+  +V  Y+ +I+ LCK   V
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 306

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN------ 579
           + A++LL EM  + + P+ VTYNS+ID   +S      + ++  ++  + + A+      
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSAL-NLMNEMHHRGQPADVVTYTS 365

Query: 580 -LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
            LDA+C   + D   A                                     +F KM +
Sbjct: 366 LLDALCKNQNLDKATA-------------------------------------LFMKMKE 388

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
             I+P + T++A+++   +    ++A  L + L
Sbjct: 389 RGIQPTMYTYTALIDGLCKGGRLKNAQELFQHL 421



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 190/395 (48%), Gaps = 7/395 (1%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           L++ L  +GE  K++  F   V  +  + D     + +++ L ++G+   A  +     +
Sbjct: 86  LMKGLCLKGEVKKSLH-FHDKVVAQGFQMDHVSYGT-LLNGLCKIGETRCAVKLLRMIED 143

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDF 280
                 V  ++ +I    +     EA  +++ M    + P+ +TY  +I   C  G    
Sbjct: 144 RSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLG--QL 201

Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
                + D+M+   + P    +N L+ A+C  G + EA +NL   M   GI   + TY+T
Sbjct: 202 MGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEA-KNLLAVMTKEGIKPGVVTYST 260

Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
           L+D  C   ++  A +I   M    ++PNV +Y+ MI+G  K  R+D+A+N+  EM    
Sbjct: 261 LMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKN 320

Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
           +  D V+YN+++    K GR   AL +  EM   G   D VTY +LL    K    D+  
Sbjct: 321 MVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKAT 380

Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
            +F +MK   + P + TY+ LID   KGG  K A ++F+     G   DV  Y+ +I  L
Sbjct: 381 ALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGL 440

Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
           CK G+ + A+++  +M   G  PN VT+  II + 
Sbjct: 441 CKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSL 475



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 181/362 (50%), Gaps = 1/362 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+    LG++  + ++    L  GY       + L+      G  ++++   + +  
Sbjct: 49  NILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVA 108

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              + + V+Y  +++   K G + +  V++   +     +P+ + +N+++    +  L  
Sbjct: 109 QGFQMDHVSYGTLLNGLCKIG-ETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVN 167

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A +L++EM  RGI  D  TY TL+   C   Q+  AF ++ EM  KNI+P V  Y+ +I
Sbjct: 168 EAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILI 227

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +   K G + +A N+ + M   GI    V+Y+T++  Y  +G  + A  +   M   G+ 
Sbjct: 228 NALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVN 287

Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
            +  +YN ++ G  K  + DE   +  +M    + P+ +TY++LID   K G    A+ +
Sbjct: 288 PNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNL 347

Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
             E    G  ADVV Y++L+DALCKN  ++ A +L  +M + GI+P + TY ++ID   +
Sbjct: 348 MNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCK 407

Query: 557 SA 558
             
Sbjct: 408 GG 409



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 190/382 (49%), Gaps = 3/382 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           Y  LL  L   GE   A++       R  R N    + + +I  L +   V+ A +++  
Sbjct: 118 YGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVV--MYNTIIDGLCKDKLVNEAYDLYSE 175

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
               G       ++ LI  +   G    A S+ + M   N+ P +  YN +I+A  K G 
Sbjct: 176 MDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEG- 234

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
           + K    +   M + G++P  +T+++L+      G  + A+ +F+ MV  G++ ++++YN
Sbjct: 235 NVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYN 294

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
            +++ +CK  ++D A  ++ EM  KN+ P+ VTY+++IDG  K+GR+  ALN+ +EM   
Sbjct: 295 IMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR 354

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G   D V+Y ++L    K    ++A  +  +M+  GI+    TY AL+ G  K G+    
Sbjct: 355 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNA 414

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
           + +F+ +       ++ TY+ +I    K G++ EA+ I  + +  G   + V +  +I +
Sbjct: 415 QELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 474

Query: 519 LCKNGLVESAVSLLDEMTKEGI 540
           L +    + A  LL EM  +G+
Sbjct: 475 LFEKDENDKAEKLLHEMIAKGL 496



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 140/272 (51%), Gaps = 7/272 (2%)

Query: 297 PDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEI 356
           P  I FN +L   ++   +  A +L  +M  +GI  +  T N L++  C   QM  +F +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
           + ++      P+ +T +T++ G    G +  +L+   ++   G  +D VSY T+L+   K
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
           +G    A+ + + +E    R + V YN ++ G  K    +E   ++ +M A  + P+ +T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           Y+TLI  +   G    A  +  E     +   V +Y+ LI+ALCK G V+ A +LL  MT
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
           KEGI+P VVTY++++D +       C V +V+
Sbjct: 248 KEGIKPGVVTYSTLMDGY-------CLVGEVQ 272



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 91/409 (22%), Positives = 187/409 (45%), Gaps = 34/409 (8%)

Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
           +P ++ ++ ++   AK  +   A+++  +M+  GI  + V+ N +++ +  LG+   +  
Sbjct: 7   TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
           V  ++   G + D +T N L+ G   +G+  +     +++ A     + ++Y TL++   
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
           K G  + A+++ R  +    + +VV+Y+ +ID LCK+ LV  A  L  EM   GI P+ +
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186

Query: 546 TYNSIIDAF---GRSATTECTVDDV---ERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
           TY ++I  F   G+       +D++     + G    +  ++A+C +   +V+EA     
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEG--NVKEA----- 239

Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEIL----CILG-------VFQKMHKLKIKPNVVTF 648
                   L+A    +G K        L    C++G       +F  M ++ + PNV ++
Sbjct: 240 ------KNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSY 293

Query: 649 SAILNACSRCNSFEDASMLLEELRLFDNQVYGVA--HGLLMGY-RDNIWVQALSLFDEVK 705
           + ++N   +C   ++A  LL E+ L  N V      + L+ G  +      AL+L +E+ 
Sbjct: 294 NIMINGLCKCKRVDEAMNLLREM-LHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMH 352

Query: 706 LMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCL 754
                     Y +L D L        A  + ++ K R +   +++ + L
Sbjct: 353 HRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 401


>gi|357444885|ref|XP_003592720.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481768|gb|AES62971.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 553

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 187/365 (51%), Gaps = 8/365 (2%)

Query: 191 DQGKLASAM-ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAIS 249
           D GK+   M I+  G+LG  + A+ +       GY   V + +AL+ AYG+ G    A +
Sbjct: 137 DFGKMDFFMLITAYGKLGDFNGAEKVLGLMNKNGYAPNVVSQTALMEAYGKGGRYNNAEA 196

Query: 250 VFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML---RNGVQPDRITFNSLL 306
           +F  M+ +  +P+  TY  ++    +G   FK   E+FD +L   ++ ++PD+  FN ++
Sbjct: 197 IFRRMQTFGPEPSAFTYQIILKTFVQGN-KFKEAEEVFDKLLNDEKSPLRPDQKMFNMMI 255

Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
            +  + G  E AR  F  M  RGI +   TYN+L+       ++     I  +M   ++ 
Sbjct: 256 YMYKKSGSHEKARQTFALMAERGIKKATVTYNSLMSFETNYKEVS---NIYDQMQRADLR 312

Query: 367 PNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLV 426
           P+VV+Y+ +I+ Y KA R ++AL +F EM   G+   R +YN +L  ++  G  E+A +V
Sbjct: 313 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSISGMVEQARIV 372

Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
            K M       D  +Y  +L  Y      +   + F+++  D   PN++TY TLI  Y+K
Sbjct: 373 FKSMRRDKYMPDLCSYTTMLSAYVNAPDMEGAEKFFKRLIQDGFEPNVVTYGTLIKGYAK 432

Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
               ++ M+ + E    G+KA+  + + ++DA  KNG  +SAV+   EM   G+ P+   
Sbjct: 433 ANDIEKVMEKYEEMLGRGIKANQTILTTIMDAHGKNGDFDSAVNWFKEMALNGLLPDQKA 492

Query: 547 YNSII 551
            N ++
Sbjct: 493 KNILL 497



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 37/272 (13%)

Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
           ++ +  +++ Y KLG F  A  V   M  +G   + V+  AL+  YGK G+Y+    +F 
Sbjct: 140 KMDFFMLITAYGKLGDFNGAEKVLGLMNKNGYAPNVVSQTALMEAYGKGGRYNNAEAIFR 199

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF---KQAGLKADVVLYSALIDALC 520
           +M+     P+  TY  ++  + +G  +KEA ++F +    +++ L+ D  +++ +I    
Sbjct: 200 RMQTFGPEPSAFTYQIILKTFVQGNKFKEAEEVFDKLLNDEKSPLRPDQKMFNMMIYMYK 259

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
           K+G  E A      M + GI+   VTYNS++       + E    +V  ++  Q + A+L
Sbjct: 260 KSGSHEKARQTFALMAERGIKKATVTYNSLM-------SFETNYKEVS-NIYDQMQRADL 311

Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
                          R D     V   L+    G+ ++E          L VF++M    
Sbjct: 312 ---------------RPD----VVSYALLINAYGKARREEEA-------LAVFEEMLDAG 345

Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
           ++P    ++ +L+A S     E A ++ + +R
Sbjct: 346 VRPTRKAYNILLDAFSISGMVEQARIVFKSMR 377


>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Cucumis sativus]
          Length = 690

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 186/388 (47%), Gaps = 33/388 (8%)

Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
           D A N++    ++GY   ++A++ L+ A  +      +  VF  MK  +  P+  TY  +
Sbjct: 256 DRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIM 315

Query: 270 IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
           I   GK G   +  + +F++ML  G  P+ I +N+++   S+ G+ + A  LF  M+   
Sbjct: 316 IRMTGKMG-RAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNN 374

Query: 330 IDQDIFTYNTLLDAICKGAQM---DLAFEIMAEMPAKNISPNVV---------------- 370
              + FTY+ +L+ +    Q+   D   E+  +   K+I   +V                
Sbjct: 375 CRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLF 434

Query: 371 -------------TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKL 417
                         Y +M++   + G+  +A+ + S++   GI  D + YNTVLS   KL
Sbjct: 435 CNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKL 494

Query: 418 GRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
            +      + ++M+  G   D  TYN L+   G+ GK  E   +FE++++    P++++Y
Sbjct: 495 KQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISY 554

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           ++LI+   K G   EA   F E +  GL  DVV YS LI+   K   VE A SL D M  
Sbjct: 555 NSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMIT 614

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVD 565
           +G  PN+VTYN ++D   R+  T  TVD
Sbjct: 615 QGCCPNIVTYNILLDCLERAGRTAETVD 642



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 197/361 (54%), Gaps = 15/361 (4%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + MI + G++G+ + +  +FE  L +G    + A++ +I A  +SG   +AI +F +M +
Sbjct: 313 TIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIK 372

Query: 257 YNLKPNLVTYNAVID---ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
            N +PN  TY+ +++   A G+ G     V+E+ +  +   +      +  L+   S+ G
Sbjct: 373 NNCRPNEFTYSIILNVLVAEGQLG-RLDEVLEVSNKFINKSI------YAYLVRTLSKLG 425

Query: 314 LWEAARNLFNEM--VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
               A  LF  M   H G D+D   Y ++L+++C+G +   A E+++++  K IS + + 
Sbjct: 426 HSSEAHRLFCNMWSFHDGGDRD--AYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMM 483

Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
           Y+T++    K  ++    +++ +MK  G   D  +YN ++S   ++G+ +EA+ V +E+E
Sbjct: 484 YNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELE 543

Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
           SS  + D ++YN+L+   GK G  DE    F +M+   ++P+++TYSTLI+ + K    +
Sbjct: 544 SSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVE 603

Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
            A  +F      G   ++V Y+ L+D L + G     V L  ++ ++G+ P+ +TY +I+
Sbjct: 604 MARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITY-AIL 662

Query: 552 D 552
           D
Sbjct: 663 D 663



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 207/451 (45%), Gaps = 50/451 (11%)

Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
           T+  LL    R    + A N++ EM  +G   DIF YN LLDA+ K  Q+D ++++  +M
Sbjct: 241 TYRCLLQAHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDM 300

Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
             K+ +P+  TY+ MI    K GR +++L +F EM   G   + ++YNT++   +K G  
Sbjct: 301 KLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMV 360

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLG---GYGKQGKYDEVRRMFEQMKADCVSPNLLTY 477
           ++A+L+   M  +  R +  TY+ +L      G+ G+ DEV  +  +        N   Y
Sbjct: 361 DKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKF------INKSIY 414

Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
           + L+   SK G   EA ++F          D   Y +++++LC+ G    A+ LL ++ +
Sbjct: 415 AYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHE 474

Query: 538 EGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRT 597
           +GI  + + YN+++                   LGK K+ ++L         D+ E  + 
Sbjct: 475 KGISTDTMMYNTVLST-----------------LGKLKQVSHL--------HDLYEKMKQ 509

Query: 598 DNQIIKVFGQ--LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
           D     +F    L++     GK +          + VF+++     KP+++++++++N  
Sbjct: 510 DGPFPDIFTYNILISSLGRVGKVKE--------AVEVFEELESSDCKPDIISYNSLINCL 561

Query: 656 SRCNSFEDASMLLEELRLFDNQVYGVAHGLLM---GYRDNIWVQALSLFDEVKLMDSSTA 712
            +    ++A M   E++        V +  L+   G  D + + A SLFD +        
Sbjct: 562 GKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEM-ARSLFDRMITQGCCPN 620

Query: 713 SAFYNALTDMLWHFGQKRGAQLVVLEGKRRQ 743
              YN L D L   G  R A+ V L  K R+
Sbjct: 621 IVTYNILLDCLERAG--RTAETVDLYAKLRE 649



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/393 (22%), Positives = 165/393 (41%), Gaps = 43/393 (10%)

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            V EI   M R+ ++    T N L+ + S     E    L  +   R    + +TY  LL
Sbjct: 190 QVREILSQMDRDQIRGTISTVNILIKIFSSNEDLELCTGLIKKWDLR---LNAYTYRCLL 246

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
            A  +    D AF +  EM +K    ++  Y+ ++D  AK  +LD +  +F +MK     
Sbjct: 247 QAHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCN 306

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            D  +Y  ++ +  K+GR EE+L + +EM + G   + + YN ++    K G  D+   +
Sbjct: 307 PDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILL 366

Query: 462 FEQMKADCVSPNLLTYSTLIDVY---SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
           F  M  +   PN  TYS +++V     + G   E +++  +F    +      Y+ L+  
Sbjct: 367 FCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFINKSI------YAYLVRT 420

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
           L K G    A  L   M       +   Y S++++  R               GK  E+ 
Sbjct: 421 LSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRG--------------GKTVEAI 466

Query: 579 NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHK 638
            L  +    +K +       N ++   G+L               +++  +  +++KM +
Sbjct: 467 EL--LSKVHEKGISTDTMMYNTVLSTLGKL---------------KQVSHLHDLYEKMKQ 509

Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
               P++ T++ ++++  R    ++A  + EEL
Sbjct: 510 DGPFPDIFTYNILISSLGRVGKVKEAVEVFEEL 542



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 5/179 (2%)

Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM-ESSGIRKDAVTY 442
           R+D    + S+M    I     + N ++ I++      E L +C  + +   +R +A TY
Sbjct: 187 RIDQVREILSQMDRDQIRGTISTVNILIKIFSS----NEDLELCTGLIKKWDLRLNAYTY 242

Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
             LL  + +    D    ++ +M +     ++  Y+ L+D  +K      + ++F++ K 
Sbjct: 243 RCLLQAHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKL 302

Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
                D   Y+ +I    K G  E +++L +EM  +G  PN++ YN++I A  +S   +
Sbjct: 303 KHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVD 361



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 64/136 (47%), Gaps = 5/136 (3%)

Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
           ++ ++ E   C  D   Y  L+  LG  G+  +A     F   +++  N      S +I 
Sbjct: 537 EVFEELESSDCKPDIISYNSLINCLGKNGDVDEA--HMRFLEMQDKGLNPDVVTYSTLIE 594

Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
             G+  KV++A+++F+  + +G    +  ++ L+    R+G   E + ++  ++   L P
Sbjct: 595 CFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTP 654

Query: 262 NLVTYNAVIDACGKGG 277
           + +TY A++D    G 
Sbjct: 655 DSITY-AILDRLQSGS 669


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 190/361 (52%), Gaps = 3/361 (0%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I    R  ++ LA +     +  G+  ++  F +L++ +       EA+S+ + +  
Sbjct: 118 TTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG 177

Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
              +PN+V YN +ID+ C KG V+    +++   M + G++PD +T+NSL+      G W
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVN--TALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
             +  + ++M+  GI  D+ T++ L+D   K  Q+  A +   EM  ++++PN+VTY+++
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           I+G    G LD+A  + + +   G   + V+YNT+++ Y K  R ++ + +   M   G+
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             D  TYN L  GY + GK+    ++  +M +  V P++ T++ L+D     G   +A+ 
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415

Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
              + +++     ++ Y+ +I  LCK   VE A  L   +  +G+ P+V+TY +++    
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475

Query: 556 R 556
           R
Sbjct: 476 R 476



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 171/335 (51%), Gaps = 8/335 (2%)

Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
           A ++ +  +  GY   V  ++ +I +    G    A+ V   MK+  ++P++VTYN++I 
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227

Query: 272 AC---GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
                G  GV  +    I  DM+R G+ PD ITF++L+ V  + G    A+  +NEM+ R
Sbjct: 228 RLFHSGTWGVSAR----ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQR 283

Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
            ++ +I TYN+L++ +C    +D A +++  + +K   PN VTY+T+I+GY KA R+DD 
Sbjct: 284 SVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDG 343

Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
           + +   M   G+  D  +YNT+   Y + G+F  A  V   M S G+  D  T+N LL G
Sbjct: 344 MKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDG 403

Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
               GK  +     E ++       ++TY+ +I    K    ++A  +F      G+  D
Sbjct: 404 LCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPD 463

Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKE-GIRP 542
           V+ Y  ++  L +  L   A  L  +M KE G+ P
Sbjct: 464 VITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 195/399 (48%), Gaps = 31/399 (7%)

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
           G   + F   + +F DM  +   P  + F+ LL   ++   +EA  +LF  +   GI  D
Sbjct: 54  GLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHD 113

Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
           ++++ TL+D  C+ A++ LA   + +M      P++VT+ ++++G+    R  +A+++  
Sbjct: 114 LYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVD 173

Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
           ++  LG   + V YNT++    + G+   AL V K M+  GIR D VTYN+L+      G
Sbjct: 174 QIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSG 233

Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
            +    R+   M    +SP+++T+S LIDVY K G   EA + + E  Q  +  ++V Y+
Sbjct: 234 TWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYN 293

Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
           +LI+ LC +GL++ A  +L+ +  +G  PN VTYN++I+ + ++      VDD       
Sbjct: 294 SLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAK----RVDD------- 342

Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
                 +  +C      V     T N + + + Q  A K    +K             V 
Sbjct: 343 -----GMKILCVMSRDGVDGDTFTYNTLYQGYCQ--AGKFSAAEK-------------VL 382

Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            +M    + P++ TF+ +L+          A + LE+L+
Sbjct: 383 GRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQ 421



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 220/459 (47%), Gaps = 24/459 (5%)

Query: 120 RHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLC------GADDYTFLLRELGNRGEWS 173
           R S+V   AL       R  +  G+++     ++C      G  DY   LR   +  +++
Sbjct: 2   RRSIVIVIALTAKGFLHRHLLEKGNLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFN 61

Query: 174 KAIQCFAFAVKREERKN--DQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAF 231
            A+  F    +     +  D  +L  A    + +L K +   ++F      G  + +Y+F
Sbjct: 62  DALTLFCDMAESHPLPSIVDFSRLLIA----IAKLNKYEAVISLFRHLEMLGISHDLYSF 117

Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD-FKHVVEIFDDM 290
           + LI  + R      A+S    M +   +P++VT+ ++++  G   V+ F   + + D +
Sbjct: 118 TTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVN--GFCHVNRFYEAMSLVDQI 175

Query: 291 LRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
           +  G +P+ + +N+++ ++C +G +   A ++   M   GI  D+ TYN+L+  +     
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQV-NTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGT 234

Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
             ++  I+++M    ISP+V+T+S +ID Y K G+L +A   ++EM    +  + V+YN+
Sbjct: 235 WGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNS 294

Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
           +++     G  +EA  V   + S G   +AVTYN L+ GY K  + D+  ++   M  D 
Sbjct: 295 LINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDG 354

Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
           V  +  TY+TL   Y + G +  A ++       G+  D+  ++ L+D LC +G +  A+
Sbjct: 355 VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL 414

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
             L+++ K      ++TYN II          C  D VE
Sbjct: 415 VRLEDLQKSKTVVGIITYNIIIKGL-------CKADKVE 446


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 196/387 (50%), Gaps = 20/387 (5%)

Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
            +++I  L ++  +D A+ + +  ++E        +++LI  Y  SG   EA+ +   M 
Sbjct: 290 CNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMS 349

Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
           R   +PN+VTY+ +ID   K G+      EIF+ M+++G +P+  T+ SLL   +  G  
Sbjct: 350 RDGQRPNVVTYSMLIDCLCKSGL-HAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNL 408

Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
               N+ + MV  G+      +N  + A CK  ++D A     +M  +   P++V Y+T+
Sbjct: 409 VDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTV 468

Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
           IDG  K GRLDDA++ F +M   G+  D +++NT++  +A  G++E+A  +  EM   GI
Sbjct: 469 IDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGI 528

Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
             +  T+N+++    K+GK  E R++F+ M      PN+++Y+T+I  Y   G   E M+
Sbjct: 529 PPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMK 588

Query: 496 IFRE-------------------FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
           +  +                       GLK DVV    LID+ C++G +E  ++L  EM 
Sbjct: 589 LLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREML 648

Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECT 563
            +  + + +T N  +      A+  C+
Sbjct: 649 GKADKTDTITENIKLRGVTVKASYHCS 675



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 168/328 (51%), Gaps = 3/328 (0%)

Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
           V +++ +I  + + G   +A ++F  M  + + PN+VT N+VID  C    +D    V  
Sbjct: 252 VVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAV-- 309

Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
              M+   + P+  T+NSL+      G W  A  +  EM   G   ++ TY+ L+D +CK
Sbjct: 310 LQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCK 369

Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
                 A EI   M      PN  TY +++ GYA  G L D  N+   M   G+   R  
Sbjct: 370 SGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHV 429

Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
           +N  +  Y K GR +EA L   +M+  G   D V Y  ++ G  K G+ D+    F QM 
Sbjct: 430 FNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMI 489

Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
            D +SP+++T++TLI  ++  G +++A ++F E    G+  +V  ++++ID L K G V 
Sbjct: 490 DDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVT 549

Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
            A  L D M + G +PNVV+YN++I  +
Sbjct: 550 EARKLFDLMPRAGAKPNVVSYNTMIHGY 577



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 250/563 (44%), Gaps = 57/563 (10%)

Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQE-------AISVFNSMKR 256
           G LG  D A ++F+  L      ++YA + L++   R+            A+S+FN M R
Sbjct: 76  GDLGPED-ALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMAR 134

Query: 257 YNLK---PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
              K   P++ T+  +I  C   G            +++ G++   +TF  LL  +C+  
Sbjct: 135 AGAKKVAPDIATFGILISCCCDAGC-LNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEK 193

Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP--AKNISPNVV 370
              +A   +   M   G   D+F+Y TLL  +C   + + A E++  M     N  PNVV
Sbjct: 194 RTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVV 253

Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
           +Y+T+I G+ K G +  A  +F +M   GI  + V+ N+V+    K+   ++A  V ++M
Sbjct: 254 SYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQM 313

Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
               I  +  TYN+L+ GY   G++ E  R+ ++M  D   PN++TYS LID   K GL+
Sbjct: 314 IDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLH 373

Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
            EA +IF    Q+G K +   Y +L+      G +    ++ D M + G+RP    +N  
Sbjct: 374 AEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIE 433

Query: 551 IDAFGRSATTECTVDDVERDLGKQKE----------SANLDAMCS---QDDKDVQEAGRT 597
           I A+ +       +D+      K ++          +  +D +C     DD   +     
Sbjct: 434 IYAYCKCGR----LDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMI 489

Query: 598 DNQI---IKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNA 654
           D+ +   I  F  L+   A  GK E    +E+      F +M    I PNV TF+++++ 
Sbjct: 490 DDGLSPDIITFNTLIHGFALHGKWEKA--EEL------FYEMMDRGIPPNVNTFNSMID- 540

Query: 655 CSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNI--------WVQALSLFDEVKL 706
                 F++   + E  +LFD      A   ++ Y   I          + + L D++ L
Sbjct: 541 ----KLFKEGK-VTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLL 595

Query: 707 MDSSTASAFYNALTDMLWHFGQK 729
           +     +  +N L D +   G K
Sbjct: 596 IGLKPTAVTFNTLLDGMVSMGLK 618


>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
 gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
          Length = 798

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 234/501 (46%), Gaps = 35/501 (6%)

Query: 230 AFSALISAYGRSGYCQEAISVFNSMK-RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
           AF ALI A+  +G   EA+  F+ M+  +  +P    YNAV+      G      + +++
Sbjct: 139 AFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPLALALYN 198

Query: 289 DMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
            M+  G  P+R T+N L+  +C RG   +A + LF+EM+ RGI  ++ T+  LL ++C  
Sbjct: 199 RMVAAGCLPNRATYNVLMDGLCKRGTAVDALK-LFDEMLQRGITPNVKTHTILLSSMCNA 257

Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG---IGLDR 404
            Q+  A  ++  M  K   P+ VTY+  + G  KAGR+D+A+     ++  G   +GL  
Sbjct: 258 GQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLK- 316

Query: 405 VSYNTVLSIYAKLGRFEEALLVCKE-MESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
             Y+ ++      GR+EE      E +E +    D V Y  ++ G  + G+ D+    F+
Sbjct: 317 -GYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFD 375

Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
           +MK    +P+   Y+TL+      G    A  +  E  Q  +  D   ++ +I  LCK  
Sbjct: 376 EMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQ 435

Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAM 583
           LV+ A+ + D M + G  P V+TYN +ID   R+   E       R L  + E  N  ++
Sbjct: 436 LVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLE-----EARMLFYKMEVGNNPSL 490

Query: 584 CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKP 643
             +      +   +++       +LV      G        ++L    + + +    + P
Sbjct: 491 FLRLTLGANQVKDSES-----LQKLVDSMCQSG--------QVLKAYKLLRGIMDSGVVP 537

Query: 644 NVVTFSAILNACSRCNSFEDASMLLEELRL----FDNQVYG-VAHGLLMGYRDNIWVQAL 698
           +VVT++ +LN   +  + + A  L  EL++     D   YG +   LL  +R N    A+
Sbjct: 538 DVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYN---DAM 594

Query: 699 SLFDEVKLMDSSTASAFYNAL 719
           +LF ++  +  + + + YN++
Sbjct: 595 TLFQDILHIGGTPSLSIYNSI 615



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 172/385 (44%), Gaps = 52/385 (13%)

Query: 223 GYGNTVYAFSALISAYGRSG-YCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
           G   T + ++A++     SG     A++++N M      PN  TYN ++D   K G    
Sbjct: 168 GCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVD 227

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
             +++FD+ML+ G+ P+  T   LL+     G  + A NL N M  +G   D  TYN  L
Sbjct: 228 -ALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFL 286

Query: 342 DAICKGAQMDLAFE-------------------------------------IMAEMPAKN 364
             +CK  ++D A E                                      M  +   +
Sbjct: 287 SGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQAD 346

Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
            SP++V Y+ MI G A+AGR+DDA   F EMK      D   YNT+L      G  + A 
Sbjct: 347 FSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGAR 406

Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
            +  EM  + +  D  T+  ++ G  K+   DE  ++F+ M      P ++TY+ LID  
Sbjct: 407 SLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGL 466

Query: 485 SKGGLYKEAMQIFRE---------FKQAGLKADVVLYS----ALIDALCKNGLVESAVSL 531
            +    +EA  +F +         F +  L A+ V  S     L+D++C++G V  A  L
Sbjct: 467 YRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKL 526

Query: 532 LDEMTKEGIRPNVVTYNSIIDAFGR 556
           L  +   G+ P+VVTYN++++   +
Sbjct: 527 LRGIMDSGVVPDVVTYNTLLNGLCK 551



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 188/394 (47%), Gaps = 23/394 (5%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEG-YGNTVYAFSALISAYGRSGYCQEAISVF-NSM 254
           +A +S L + G+VD A    E     G +   +  +S LI     +G  +E    +   +
Sbjct: 283 NAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVL 342

Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGG 313
           ++ +  P++V Y  +I  C + G         FD+M      PD   +N+LL A+C  G 
Sbjct: 343 EQADFSPDIVLYTIMIRGCAEAG-RIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGD 401

Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
           L + AR+L +EM    +  D  T+  ++  +CK   +D A ++   M      P V+TY+
Sbjct: 402 L-DGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYN 460

Query: 374 TMIDGYAKAGRLDDALNMFSEMK-------FLGIGL------DRVSYNTVLSIYAKLGRF 420
            +IDG  +A RL++A  +F +M+       FL + L      D  S   ++    + G+ 
Sbjct: 461 VLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQV 520

Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
            +A  + + +  SG+  D VTYN LL G  K    D   R+F +++    S + +TY TL
Sbjct: 521 LKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTL 580

Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSL-LDEMTKEG 539
           ID   +   Y +AM +F++    G    + +Y++++ +LC+   +  A++   D + K  
Sbjct: 581 IDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWFDHLLK-- 638

Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
            + N+   + +I A  R    E ++D+  R+L K
Sbjct: 639 -KYNLSAQDEVI-ASARKKFEEGSLDEAVRELIK 670



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 168/387 (43%), Gaps = 35/387 (9%)

Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR-GIDQDIFTYNTLLDA-ICKGAQMD 351
           G+QP    F +L+   +  G    A + F+ M    G     F YN +L   +  G  + 
Sbjct: 132 GLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVP 191

Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
           LA  +   M A    PN  TY+ ++DG  K G   DAL +F EM   GI  +  ++  +L
Sbjct: 192 LALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILL 251

Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE-VRRMFEQMKADCV 470
           S     G+ +EA  +   ME  G   D VTYNA L G  K G+ DE + R+    +    
Sbjct: 252 SSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTF 311

Query: 471 SPNLLTYSTLIDVYSKGGLYKEAMQIFRE-FKQAGLKADVVLYSALIDALCKNGLVESAV 529
              L  YS LID     G Y+E  Q + E  +QA    D+VLY+ +I    + G ++ A 
Sbjct: 312 VLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAF 371

Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
           +  DEM ++   P+   YN+++ A        C   D++       E A  + +   +  
Sbjct: 372 AFFDEMKEKRFTPDTFCYNTLLKAL-------CDSGDLDGARSLMSEMAQNNVVLDTNTH 424

Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
            +   G    Q++        ++A Q                VF  M ++   P V+T++
Sbjct: 425 TIMIHGLCKKQLV--------DEAMQ----------------VFDGMVEVGCHPTVMTYN 460

Query: 650 AILNACSRCNSFEDASMLLEELRLFDN 676
            +++   R +  E+A ML  ++ + +N
Sbjct: 461 VLIDGLYRAHRLEEARMLFYKMEVGNN 487



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 150/317 (47%), Gaps = 17/317 (5%)

Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
           G   Y+ L+  L   G + +  QC+   +++ +   D   L + MI      G++D A  
Sbjct: 314 GLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDI-VLYTIMIRGCAEAGRIDDAFA 372

Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-C 273
            F+    + +    + ++ L+ A   SG    A S+ + M + N+  +  T+  +I   C
Sbjct: 373 FFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLC 432

Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM-------- 325
            K  VD    +++FD M+  G  P  +T+N L+    R    E AR LF +M        
Sbjct: 433 KKQLVD--EAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSL 490

Query: 326 ---VHRGIDQ--DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
              +  G +Q  D  +   L+D++C+  Q+  A++++  +    + P+VVTY+T+++G  
Sbjct: 491 FLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLC 550

Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
           K   LD AL +F E++  G  LD ++Y T++    +  R+ +A+ + +++   G      
Sbjct: 551 KVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLS 610

Query: 441 TYNALLGGYGKQGKYDE 457
            YN+++    +  K  +
Sbjct: 611 IYNSIMRSLCRMNKLSQ 627


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 178/356 (50%), Gaps = 2/356 (0%)

Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
           I  L R G +D A  + E+ ++EG    V +++ LI  + +     EA    + M    +
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
           +PN  TYN +I+   K G+  ++  +I  D +  G  PD  T++SL+      G    A 
Sbjct: 318 EPNEFTYNTIINGFCKAGM-MQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376

Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
            +F E + +G    I  YNTL+  + K   +  A ++M +M     SP++ TY+ +++G 
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436

Query: 380 AKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDA 439
            K G L DA  + ++    G   D  ++NT++  Y K    ++A+ +   M S GI  D 
Sbjct: 437 CKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496

Query: 440 VTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
           +TYN LL G  K  K D V   F+ M     +PN++TY+ LI+ + K     EAM++F+E
Sbjct: 497 ITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKE 556

Query: 500 FKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE-GIRPNVVTYNSIIDAF 554
            K  GL  D+V    LI  LC NG ++ A  L   + KE     +   +N +I+AF
Sbjct: 557 MKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAF 612



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/516 (23%), Positives = 254/516 (49%), Gaps = 38/516 (7%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
           Y  ++R+ G +G+  +A+  F    +R +  + +  + S  A+++IL   G    A  ++
Sbjct: 79  YIGIMRDYGRKGKVQEAVNVF----ERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVY 134

Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
               + G    VY  +  + ++  +G    A+ + N+M     + N V+Y AVI    K 
Sbjct: 135 MRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKE 194

Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
               +    +FD+ML+ G+ PD +TFN L+ V  + G  + +  LF++++ RG+  ++FT
Sbjct: 195 NCQIE-AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFT 253

Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
           +N  +  +C+   +D A  ++  + ++ ++P+V++Y+T+I G+ K  +L +A     +M 
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMV 313

Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
             G+  +  +YNT+++ + K G  + A  + ++    G   D  TY++L+ G    G  +
Sbjct: 314 NSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMN 373

Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
               +F +        +++ Y+TL+   SK GL  +A+Q+ ++  + G   D+  Y+ ++
Sbjct: 374 RAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVV 433

Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
           + LCK G +  A  +L++   +G  P++ T+N++ID + +           +R++ K  E
Sbjct: 434 NGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCK-----------QRNMDKAIE 482

Query: 577 SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
              LD M S         G T + I   +  L+       K +N        ++  F+ M
Sbjct: 483 I--LDTMLSH--------GITPDVI--TYNTLLNGLCKARKLDN--------VVDTFKAM 522

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
            +    PN++T++ ++ +  +     +A  L +E++
Sbjct: 523 LEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMK 558



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 181/393 (46%), Gaps = 39/393 (9%)

Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
           + +I+   + G +  A  I   A+ +G+    + +S+LI+     G    A++VF     
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384

Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
              K +++ YN ++    K G+  +  +++  DM+ +G  PD  T+N ++    + G   
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQ-ALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
            A  + N+ + +G   DIFT+NTL+D  CK   MD A EI+  M +  I+P+V+TY+T++
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503

Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
           +G  KA +LD+ ++ F  M   G   + ++YN ++  + K  +  EA+ + KEM++ G+ 
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563

Query: 437 KDAVTYNALLGGYGKQGKYDEV------------------------------------RR 460
            D VT   L+ G    G+ D+                                      +
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEK 623

Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
           +F +M     +P+  TY  +ID Y K G    A     E    GL         +++ LC
Sbjct: 624 LFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLC 683

Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
               +  AV +++ M + GI P  V  NSI +A
Sbjct: 684 VTHRLSEAVVIINLMVQNGIVPEEV--NSIFEA 714



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 109/275 (39%), Gaps = 69/275 (25%)

Query: 434 GIRKDAVTYNALLGGYGKQGKYD-------EVRR-------------------------- 460
           G +    TY  ++   G  GK++       E+R+                          
Sbjct: 35  GFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQE 94

Query: 461 ---MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
              +FE+M      P++ +Y+ ++++  + G + +A +++   K  G+  DV  ++  + 
Sbjct: 95  AVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMK 154

Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
           + C  G   +A+ LL+ M  +G   N V+Y ++I  F +                 Q E+
Sbjct: 155 SFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC--------------QIEA 200

Query: 578 ANL-DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKM 636
            +L D M  Q    +     T N++I V            KK N    E L     F K+
Sbjct: 201 YHLFDEMLKQ---GICPDILTFNKLIHVL----------CKKGNVQESEKL-----FSKV 242

Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            K  + PN+ TF+  +    R  + ++A+ LLE +
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI 277



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 118/279 (42%), Gaps = 19/279 (6%)

Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
           T++G +  + TY  +I+  G     E  ++DV  ++ K  +S  L+ +     +D    G
Sbjct: 32  TEDGFKHTLETYKCMIEKLGLHGKFE-AMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKG 90

Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK-PNVVTFSAILNA 654
           +   + + VF ++         +       IL   G F + HK+ ++  ++  +  +   
Sbjct: 91  KV-QEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTH 149

Query: 655 CSRCNSFEDASMLLEELRLFDN------QVYGVAHGLLMG--YRDNIWVQALSLFDEVKL 706
             R  SF         LRL +N      +   V++  ++   Y++N  ++A  LFDE+  
Sbjct: 150 TIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLK 209

Query: 707 MDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARA 766
                    +N L  +L   G  + ++ +  +  +R V  N+++ +     L   GA   
Sbjct: 210 QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDE 269

Query: 767 MVHAWLLNIHSIVFEGHELPKLLS---ILTGWGKHSKVV 802
                   + SIV EG   P ++S   ++ G+ KHSK+V
Sbjct: 270 AARL----LESIVSEGLT-PDVISYNTLICGFCKHSKLV 303


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 203/393 (51%), Gaps = 3/393 (0%)

Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
           YT  +R LG    + +A +  A  ++ E  K D     + +I +L   G++  AK++F  
Sbjct: 233 YTICIRVLGQAKRFDEAYRILA-KMENEGCKPDV-ITHTVLIQVLCDAGRISDAKDVFWK 290

Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
                       +  L+  +G +G  Q  + ++N+MK      N+V Y AVIDA  + G 
Sbjct: 291 MKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 350

Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
            F+  +E+FD+M + G+ P++ ++NSL++   +   +  A  LF  M   G   + +T+ 
Sbjct: 351 VFE-ALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHV 409

Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
             ++   K  +   A +    M +K I P+VV  + ++ G AK+GRL  A  +F E+K +
Sbjct: 410 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 469

Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
           G+  D ++Y  ++   +K  +F+EA+ +  +M  +    D +  N+L+    K G+ DE 
Sbjct: 470 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 529

Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
            R+F Q+K   + P   TY+TL+    + G  KE M +  E   +    +++ Y+ ++D 
Sbjct: 530 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 589

Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
           LCKNG V  A+ +L  MT +G  P++ +YN++I
Sbjct: 590 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVI 622



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 142/265 (53%)

Query: 294  GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
            GV      +NSL+       L + A  LF EM   G   D FTYN LLDA+ K  +++  
Sbjct: 750  GVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEM 809

Query: 354  FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
             ++  EM  K      VTY+T+I G  K+ RL+ A++++  +   G      +Y  +L  
Sbjct: 810  LKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDG 869

Query: 414  YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
              K GR E+A  +  EM   G + +   YN LL G+   G  ++V  +F+ M    ++P+
Sbjct: 870  LLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 929

Query: 474  LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
            + +Y+ +ID   K G   + +  FR+  + GL+ D++ Y+ LID L K+  +E AVSL +
Sbjct: 930  IKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFN 989

Query: 534  EMTKEGIRPNVVTYNSIIDAFGRSA 558
            EM K+GI PN+ TYNS+I   G++ 
Sbjct: 990  EMQKKGIVPNLYTYNSLILHLGKAG 1014



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 131/565 (23%), Positives = 268/565 (47%), Gaps = 42/565 (7%)

Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
           L+R  G  G+ ++        ++R+  K + G  A A+   LG  G +  A         
Sbjct: 99  LMRGHGRVGDMAEVFD----VMQRQIVKANVGTFA-AIFGGLGVEGGLRSAPVALPVMKE 153

Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
            G     Y ++ L+    +SG+ +EA+ V+  M    + P++ TY+ ++ A GK   D +
Sbjct: 154 AGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRR-DVE 212

Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
            V+ +  +M  +GV+P+  ++   + V  +   ++ A  +  +M + G   D+ T+  L+
Sbjct: 213 TVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLI 272

Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
             +C   ++  A ++  +M   +  P+ VTY T++D +   G     + +++ MK  G  
Sbjct: 273 QVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYN 332

Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
            + V+Y  V+    ++GR  EAL +  EM+  GI  +  +YN+L+ G+ K  ++ +   +
Sbjct: 333 DNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALEL 392

Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
           F+ M      PN  T+   I+ Y K G   +A+Q +   K  G+  DVV  +A++  L K
Sbjct: 393 FKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 452

Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
           +G +  A  +  E+   G+ P+ +TY  +I    +++  +  V  +  D+ +     ++ 
Sbjct: 453 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAV-KIFYDMIENNCVPDVL 511

Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK------------AGQGKKENRCRQEILCI 629
           A+ S  D  + +AGR D +  ++F QL                AG G +E + ++    +
Sbjct: 512 AVNSLIDT-LYKAGRGD-EAWRIFYQLKEMNLEPTDGTYNTLLAGLG-REGKVKE----V 564

Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA-SML--------LEELRLFDNQVYG 680
           + + ++M+     PN++T++ IL+   +  +  DA  ML        + +L  ++  +YG
Sbjct: 565 MHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 624

Query: 681 VAHGLLMGYRDNIWVQALSLFDEVK 705
           +        ++  + +A S+F ++K
Sbjct: 625 LV-------KEERYNEAFSIFCQMK 642



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 179/374 (47%), Gaps = 4/374 (1%)

Query: 189  KNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAI 248
            K D+    S M  IL + G ++ +    E   + G     +    LI    +     EA 
Sbjct: 682  KTDRSSCHSLMEGILKKAG-IEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAH 740

Query: 249  SVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVE-IFDDMLRNGVQPDRITFNSLLA 307
             +    K + +      YN++I  CG    +   + E +F +M   G  PD  T+N LL 
Sbjct: 741  ELVKKFKSFGVSLKTGLYNSLI--CGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLD 798

Query: 308  VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP 367
               +    E    +  EM  +G +    TYNT++  + K  +++ A ++   + ++  SP
Sbjct: 799  AMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSP 858

Query: 368  NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
               TY  ++DG  KAGR++DA N+F+EM   G   +   YN +L+ +   G  E+   + 
Sbjct: 859  TPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLF 918

Query: 428  KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
            ++M   GI  D  +Y  ++    K G+ ++    F Q+    + P+L+TY+ LID   K 
Sbjct: 919  QDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKS 978

Query: 488  GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
               +EA+ +F E ++ G+  ++  Y++LI  L K G    A  + +E+  +G +PNV TY
Sbjct: 979  KRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTY 1038

Query: 548  NSIIDAFGRSATTE 561
            N++I  +  S +T+
Sbjct: 1039 NALIRGYSVSGSTD 1052



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 157/660 (23%), Positives = 280/660 (42%), Gaps = 87/660 (13%)

Query: 132  VTAFARDDVSLGDILKKFE-FKLCGA--DDYTFLL--RELGNRGEWSKAIQCFAFAVKRE 186
            ++ F + D   GD L+ F+   + G   + YT +L     G  GE  KAIQ       R 
Sbjct: 377  ISGFLKAD-RFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ-------RY 428

Query: 187  ERKNDQGKL-----ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
            E    +G +      +A++  L + G++ +AK +F      G       ++ +I    ++
Sbjct: 429  ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKA 488

Query: 242  GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
                EA+ +F  M   N  P+++  N++ID   K G        IF  +    ++P   T
Sbjct: 489  SKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG-DEAWRIFYQLKEMNLEPTDGT 547

Query: 302  FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
            +N+LLA   R G  +   +L  EM H     ++ TYNT+LD +CK   ++ A +++  M 
Sbjct: 548  YNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMT 607

Query: 362  AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
             K   P++ +Y+T+I G  K  R ++A ++F +MK + I  D  +  T+L  + K+G  +
Sbjct: 608  TKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIP-DYATLCTILPSFVKIGLMK 666

Query: 422  EALLVCKE------------------------------------MESSGIRKDAVTYNAL 445
            EAL + K+                                    + SSGI  D      L
Sbjct: 667  EALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPL 726

Query: 446  LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
            +    KQ K  E   + ++ K+  VS     Y++LI       L   A  +F E K+ G 
Sbjct: 727  IKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGC 786

Query: 506  KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
              D   Y+ L+DA+ K+  +E  + + +EM ++G     VTYN+II    +S   E  + 
Sbjct: 787  GPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI- 845

Query: 566  DVERDLGKQKESAN-------LDAMCSQDDKDVQEAGRTDNQIIK--------VFGQLVA 610
            D+  +L  Q  S         LD +       +++A    N++++        ++  L+ 
Sbjct: 846  DLYYNLMSQGFSPTPCTYGPLLDGLLKAG--RIEDAENLFNEMLEYGCKANCTIYNILLN 903

Query: 611  EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEE 670
                 G  E  C         +FQ M    I P++ +++ I++   +     D      +
Sbjct: 904  GHRIAGNTEKVCH--------LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQ 955

Query: 671  LRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
            L     +   + + LL+    +     +A+SLF+E++          YN+L   + H G+
Sbjct: 956  LLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSL---ILHLGK 1012



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 155/317 (48%), Gaps = 1/317 (0%)

Query: 231  FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
            +++LI           A  +F  MK     P+  TYN ++DA GK  +  + ++++ ++M
Sbjct: 758  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS-MRIEEMLKVQEEM 816

Query: 291  LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
             R G +   +T+N++++   +    E A +L+  ++ +G      TY  LLD + K  ++
Sbjct: 817  HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRI 876

Query: 351  DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
            + A  +  EM       N   Y+ +++G+  AG  +   ++F +M   GI  D  SY  +
Sbjct: 877  EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTII 936

Query: 411  LSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCV 470
            +    K G+  + L   +++   G+  D +TYN L+ G GK  + +E   +F +M+   +
Sbjct: 937  IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 996

Query: 471  SPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530
             PNL TY++LI    K G   EA +++ E    G K +V  Y+ALI     +G  +SA +
Sbjct: 997  VPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYA 1056

Query: 531  LLDEMTKEGIRPNVVTY 547
                M   G  PN  TY
Sbjct: 1057 AYGRMIVGGCLPNSSTY 1073



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 146/282 (51%), Gaps = 1/282 (0%)

Query: 199  MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
            ++  +G+  +++    + E    +GY +T   ++ +IS   +S   ++AI ++ ++    
Sbjct: 796  LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 855

Query: 259  LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
              P   TY  ++D   K G   +    +F++ML  G + +   +N LL      G  E  
Sbjct: 856  FSPTPCTYGPLLDGLLKAG-RIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKV 914

Query: 319  RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
             +LF +MV +GI+ DI +Y  ++D +CK  Q++       ++    + P+++TY+ +IDG
Sbjct: 915  CHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDG 974

Query: 379  YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
              K+ RL++A+++F+EM+  GI  +  +YN+++    K G+  EA  + +E+ + G + +
Sbjct: 975  LGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPN 1034

Query: 439  AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
              TYNAL+ GY   G  D     + +M      PN  TY  L
Sbjct: 1035 VFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 117/478 (24%), Positives = 214/478 (44%), Gaps = 38/478 (7%)

Query: 197  SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
            + ++  L + G V+ A ++  +   +G    + +++ +I    +     EA S+F  MK+
Sbjct: 584  NTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK 643

Query: 257  YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD-MLRNGVQPDRITFNSLL-AVCSRGGL 314
              L P+  T   ++ +  K G+  K  + I  D  L+ G + DR + +SL+  +  + G+
Sbjct: 644  V-LIPDYATLCTILPSFVKIGL-MKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGI 701

Query: 315  WEAARNLFNEMV-HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
             ++    F E++   GI  D F    L+  +CK  +   A E++ +  +  +S     Y+
Sbjct: 702  EKSIE--FAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYN 759

Query: 374  TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
            ++I G      +D A  +F+EMK LG G D  +YN +L    K  R EE L V +EM   
Sbjct: 760  SLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRK 819

Query: 434  GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
            G     VTYN ++ G  K  + ++   ++  + +   SP   TY  L+D   K G  ++A
Sbjct: 820  GYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDA 879

Query: 494  MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
              +F E  + G KA+  +Y+ L++     G  E    L  +M  +GI P++ +Y  IID 
Sbjct: 880  ENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID- 938

Query: 554  FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKA 613
                  T C    +   L   ++              + E G   + I      L+ +  
Sbjct: 939  ------TLCKAGQLNDGLTYFRQ--------------LLEMGLEPDLITY---NLLIDGL 975

Query: 614  GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
            G+ K+           + +F +M K  I PN+ T+++++    +     +A  + EEL
Sbjct: 976  GKSKRLEEA-------VSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1026



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 133/327 (40%), Gaps = 47/327 (14%)

Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
           S N +L +    GR  +   V   M+   ++ +  T+ A+ GG G +G           M
Sbjct: 92  SCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVM 151

Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
           K   +  N  TY+ L+    K G  +EA++++R     G+   V  YS L+ A  K   V
Sbjct: 152 KEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDV 211

Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK---------- 575
           E+ + LL EM   G++PNV +Y   I   G++       D+  R L K +          
Sbjct: 212 ETVLWLLREMEAHGVKPNVYSYTICIRVLGQAK----RFDEAYRILAKMENEGCKPDVIT 267

Query: 576 ESANLDAMCS----QDDKDV--------QEAGRT-------------DNQ-IIKVFGQLV 609
            +  +  +C      D KDV        Q+  R              D+Q +++++  + 
Sbjct: 268 HTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK 327

Query: 610 AEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
           A+             + LC +G       +F +M +  I P   +++++++   + + F 
Sbjct: 328 ADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFG 387

Query: 663 DASMLLEELRLFDNQVYGVAHGLLMGY 689
           DA  L + + +   +  G  H L + Y
Sbjct: 388 DALELFKHMDIHGPKPNGYTHVLFINY 414



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 3/182 (1%)

Query: 159  YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
            Y  LL   G+R   +    C  F    ++  N   K  + +I  L + G+++     F  
Sbjct: 898  YNILLN--GHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQ 955

Query: 219  ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
             L  G    +  ++ LI   G+S   +EA+S+FN M++  + PNL TYN++I   GK G 
Sbjct: 956  LLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAG- 1014

Query: 279  DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
                  ++++++L  G +P+  T+N+L+   S  G  ++A   +  M+  G   +  TY 
Sbjct: 1015 KAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYM 1074

Query: 339  TL 340
             L
Sbjct: 1075 QL 1076


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.320    0.134    0.400 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,635,472,494
Number of Sequences: 23463169
Number of extensions: 582836825
Number of successful extensions: 2437230
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10383
Number of HSP's successfully gapped in prelim test: 3790
Number of HSP's that attempted gapping in prelim test: 2075164
Number of HSP's gapped (non-prelim): 109088
length of query: 877
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 725
effective length of database: 8,792,793,679
effective search space: 6374775417275
effective search space used: 6374775417275
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)