BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002814
(877 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 1175 bits (3040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/836 (69%), Positives = 671/836 (80%), Gaps = 32/836 (3%)
Query: 28 NNHHRQSHHPS--SRPHWTSHKVSLTKPPLSPSPRNAPKPAATSTTVAP----NPKPFHS 81
NNH + +P+ RP+ S SPR + P ++ TVAP P F
Sbjct: 76 NNHRQTRQNPNYNHRPYGASS-----------SPRGSAPPPSSVATVAPAQLSQPPNF-- 122
Query: 82 LSPLPSSKSELAPDFSGRRSTRFVSKMHFGRPKIAMSTRHSVVAEEALHHVTAFARDDVS 141
SPL + KS+L+ DFSGRRSTRFVSKMHFGR K M+TRHS AE+AL + F+ DD
Sbjct: 123 -SPLQTPKSDLSSDFSGRRSTRFVSKMHFGRQKTTMATRHSSAAEDALQNAIDFSGDDEM 181
Query: 142 LGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
++ FE KLCG+DD T+++RELGNR E KA+ + FAVKRE RKN+QGKLASAMIS
Sbjct: 182 FHSLMLSFESKLCGSDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMIS 241
Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
LGR GKV +AK IFETA GYGNTVYAFSALISAYGRSG +EAISVFNSMK Y L+P
Sbjct: 242 TLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRP 301
Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
NLVTYNAVIDACGKGG++FK V + FD+M RNGVQPDRITFNSLLAVCSRGGLWEAARNL
Sbjct: 302 NLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNL 361
Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
F+EM +R I+QD+F+YNTLLDAICKG QMDLAFEI+A+MP K I PNVV+YST+IDG+AK
Sbjct: 362 FDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAK 421
Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
AGR D+ALN+F EM++LGI LDRVSYNT+LSIY K+GR EEAL + +EM S GI+KD VT
Sbjct: 422 AGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVT 481
Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
YNALLGGYGKQGKYDEV+++F +MK + V PNLLTYSTLID YSKGGLYKEAM+IFREFK
Sbjct: 482 YNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFK 541
Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
AGL+ADVVLYSALIDALCKNGLV SAVSL+DEMTKEGI PNVVTYNSIIDAFGRSAT +
Sbjct: 542 SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Query: 562 CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE-N 620
+ D S+ L A+ + N++I++FGQL E + K+
Sbjct: 602 RSA-DYSNGGSLPFSSSALSALTETE----------GNRVIQLFGQLTTESNNRTTKDCE 650
Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYG 680
QE+ CIL VF+KMH+L+IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN+VYG
Sbjct: 651 EGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYG 710
Query: 681 VAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGK 740
V HGLLMG R+N+W+QA SLFD+V MD STASAFYNALTDMLWHFGQKRGA+LV LEG+
Sbjct: 711 VVHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGR 770
Query: 741 RRQVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSK 800
RQVWENVWS+SCLDLHLMSSGAARAMVHAWLLNI SIV+EGHELPK+LSILTGWGKHSK
Sbjct: 771 SRQVWENVWSDSCLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSK 830
Query: 801 VVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHD 856
VVGDGALRRAVEVLL GM APF ++ CN+GRF S+G +VA+WLRES TLK+L+LHD
Sbjct: 831 VVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLLILHD 886
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 291 bits (746), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 192/739 (25%), Positives = 384/739 (51%), Gaps = 61/739 (8%)
Query: 96 FSGRRSTRFVSKMHFGRPKIAMST-RHSVVAEEALHHVTAFARDDVSLGDILKKFEFKLC 154
FSG+ + + G P +++ ++S E ++ +++ S+ L F+ KL
Sbjct: 47 FSGKIKAK-TKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRG-SIARCLDIFKNKL- 103
Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
+D+ + +E RG+W ++++ F + ++R+ + + MIS+LGR G +D
Sbjct: 104 SLNDFALVFKEFAGRGDWQRSLRLFKY-MQRQIWCKPNEHIYTIMISLLGREGLLDKCLE 162
Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
+F+ ++G +V++++ALI+AYGR+G + ++ + + MK + P+++TYN VI+AC
Sbjct: 163 VFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACA 222
Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
+GG+D++ ++ +F +M G+QPD +T+N+LL+ C+ GL + A +F M GI D+
Sbjct: 223 RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDL 282
Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
TY+ L++ K +++ +++ EM + P++ +Y+ +++ YAK+G + +A+ +F +
Sbjct: 283 TTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQ 342
Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
M+ G + +Y+ +L+++ + GR+++ + EM+SS DA TYN L+ +G+ G
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
+ EV +F M + + P++ TY +I KGGL+++A +I + + Y+
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTG 462
Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA---TTECTVDD-VERD 570
+I+A + L E A+ + M + G P++ T++S++ +F R +E + V+
Sbjct: 463 VIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSG 522
Query: 571 LGKQKESANLDAMCSQDDKDVQEAGRT-----------DNQIIKV------FGQLVAEKA 613
+ + +++ N + +EA +T D + ++ F +LV E
Sbjct: 523 IPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDE-- 580
Query: 614 GQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
CR++ F++M I P+++ + +L + ++D + LLEE +
Sbjct: 581 --------CREQ-------FEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEE--M 623
Query: 674 FDNQV---YGVAHGLLMG-YRDNI-WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQ 728
N+V + V ++ G Y D+ W + D++ FYNAL D LW GQ
Sbjct: 624 LSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQ 683
Query: 729 KRGAQLVVLEGKRRQVWEN-------VWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFE 781
K A V+ E +R ++ VWS +D+H MS G + WL +I+ ++ +
Sbjct: 684 KERAARVLNEATKRGLFPELFRKNKLVWS---VDVHRMSEGGMYTALSVWLNDINDMLLK 740
Query: 782 GHELPKLLSILTGWGKHSK 800
G +LP+L +++ G+ K
Sbjct: 741 G-DLPQLAVVVSVRGQLEK 758
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/564 (27%), Positives = 293/564 (51%), Gaps = 34/564 (6%)
Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKND-QGKLASAMISILGRLGKVDLAKNIFETAL 220
L+ LG ++ A++ F + +K+++ ++ + + +IS+LG+ G+V A N+F
Sbjct: 141 FLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQ 200
Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDF 280
+G+ VY++++LISA+ SG +EA++VF M+ KP L+TYN +++ GK G +
Sbjct: 201 EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW 260
Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
+ + + M +G+ PD T+N+L+ C RG L + A +F EM G D TYN L
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 320
Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
LD K + A +++ EM SP++VTY+++I YA+ G LD+A+ + ++M G
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
D +Y T+LS + + G+ E A+ + +EM ++G + + T+NA + YG +GK+ E+ +
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
+F+++ +SP+++T++TL+ V+ + G+ E +F+E K+AG + ++ LI A
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
+ G E A+++ M G+ P++ TYN+++ A R E + E+ L +
Sbjct: 501 RCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS----EKVLAE------- 549
Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
E GR + L A G +EI + + ++++
Sbjct: 550 -----------MEDGRCKPNELTYCSLLHAYANG---------KEIGLMHSLAEEVYSGV 589
Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEEL--RLFDNQVYGVAHGLLMGYRDNIWVQAL 698
I+P V ++ CS+C+ +A EL R F + + + + R + +A
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 649
Query: 699 SLFDEVKLMDSSTASAFYNALTDM 722
+ D +K + + A YN+L M
Sbjct: 650 GVLDYMKERGFTPSMATYNSLMYM 673
Score = 192 bits (488), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 197/366 (53%), Gaps = 3/366 (0%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+ ++S R GKV+ A +IFE N G + F+A I YG G E + +F+ +
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
L P++VT+N ++ G+ G+D V +F +M R G P+R TFN+L++ SR G +E
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMD-SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
A ++ M+ G+ D+ TYNT+L A+ +G + + +++AEM PN +TY +++
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDR-VSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
YA G+ ++ +E + G+ R V T++ + +K EA E++ G
Sbjct: 567 HAYAN-GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
D T N+++ YG++ + + + MK +P++ TY++L+ ++S+ + ++ +
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
I RE G+K D++ Y+ +I A C+N + A + EM GI P+V+TYN+ I ++
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 556 RSATTE 561
+ E
Sbjct: 746 ADSMFE 751
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 219/464 (47%), Gaps = 34/464 (7%)
Query: 112 RPKIAMSTRH---------SVVAEEALHHVTAFARDDVSLGDILKKFEFKLCGADD---- 158
RPK AM + S+V +L ++A+ARD G + + E K A+
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSL--ISAYARD----GMLDEAMELKNQMAEKGTKP 382
Query: 159 ----YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK----LASAMISILGRLGKVD 210
YT LL G+ A+ F EE +N K +A I + G GK
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIF------EEMRNAGCKPNICTFNAFIKMYGNRGKFT 436
Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
IF+ G + ++ L++ +G++G E VF MKR P T+N +I
Sbjct: 437 EMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
A + G F+ + ++ ML GV PD T+N++LA +RGG+WE + + EM
Sbjct: 497 SAYSRCG-SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
+ TY +LL A G ++ L + E+ + I P V T++ +K L +A
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615
Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
FSE+K G D + N+++SIY + +A V M+ G TYN+L+ +
Sbjct: 616 AFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHS 675
Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
+ + + + ++ A + P++++Y+T+I Y + ++A +IF E + +G+ DV+
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVI 735
Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
Y+ I + + + E A+ ++ M K G RPN TYNSI+D +
Sbjct: 736 TYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 143/304 (47%), Gaps = 34/304 (11%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+ +IS R G + A ++ L+ G + ++ +++A R G +++ V M+
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 257 YNLKPNLVTYNAVIDACGKG---------------------GVDFKHVVEI--------- 286
KPN +TY +++ A G V K +V +
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE 612
Query: 287 ----FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
F ++ G PD T NS++++ R + A + + M RG + TYN+L+
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
+ A + EI+ E+ AK I P++++Y+T+I Y + R+ DA +FSEM+ GI
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
D ++YNT + YA FEEA+ V + M G R + TYN+++ GY K + DE +
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792
Query: 463 EQMK 466
E ++
Sbjct: 793 EDLR 796
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 175/388 (45%), Gaps = 51/388 (13%)
Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-----SAMISILGRL 206
C + TF ++ GNRG++++ ++ F + N G + ++++ G+
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIF-------DEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
G +F+ G+ F+ LISAY R G ++A++V+ M + P+L TY
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTY 527
Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-------------------- 306
N V+ A +GG+ ++ ++ +M +P+ +T+ SLL
Sbjct: 528 NTVLAALARGGM-WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586
Query: 307 ---------------AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
VCS+ L A F+E+ RG DI T N+++ + +
Sbjct: 587 SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
A ++ M + +P++ TY++++ ++++ + + E+ GI D +SYNTV+
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706
Query: 412 SIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVS 471
Y + R +A + EM +SGI D +TYN +G Y ++E + M
Sbjct: 707 YAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCR 766
Query: 472 PNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
PN TY++++D Y K EA ++F E
Sbjct: 767 PNQNTYNSIVDGYCKLNRKDEA-KLFVE 793
Score = 97.1 bits (240), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
EA F+ +K P++ T N+++ G+ + K + D M G P T+NSL
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAK-ANGVLDYMKERGFTPSMATYNSL 670
Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
+ + SR + + + E++ +GI DI +YNT++ A C+ +M A I +EM I
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
P+V+TY+T I YA ++A+ + M G ++ +YN+++ Y KL R +EA L
Sbjct: 731 VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKL 790
Query: 426 VCKEMES 432
+++ +
Sbjct: 791 FVEDLRN 797
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 146/362 (40%), Gaps = 44/362 (12%)
Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
A + F + K LD ++S+ K GR A + ++ G D +Y +L+
Sbjct: 157 AFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLIS 216
Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGL-YKEAMQIFREFKQAGLK 506
+ G+Y E +F++M+ D P L+TY+ +++V+ K G + + + + K G+
Sbjct: 217 AFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIA 276
Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
D Y+ LI + L + A + +EM G + VTYN+++D +G+S + +
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKV 336
Query: 567 VERDL--GKQKESANLDAMCSQDDKD--VQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
+ + G +++ S +D + EA NQ+ AEK
Sbjct: 337 LNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM--------AEKG--------- 379
Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQVY 679
KP+V T++ +L+ R E A + EE+R N
Sbjct: 380 ------------------TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICT 421
Query: 680 GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEG 739
A + G R + + + +FDE+ + S +N L + G V E
Sbjct: 422 FNAFIKMYGNRGK-FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 740 KR 741
KR
Sbjct: 481 KR 482
Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 41/275 (14%)
Query: 453 GKYDEV-RRMFEQMK--ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
G+ D V +FE K + S LL + + + K L A F + K D
Sbjct: 114 GQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDN 173
Query: 510 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
+ + +I L K G V SA ++ + + ++G +V +Y S+I AF S
Sbjct: 174 SVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANS------------ 221
Query: 570 DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCI 629
G+ +E+ N+ +D + T N I+ VFG++ G N+ I
Sbjct: 222 --GRYREAVNVFKKMEEDG--CKPTLITYNVILNVFGKM-------GTPWNK-------I 263
Query: 630 LGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL----FDNQVYGVAHGL 685
+ +KM I P+ T++ ++ C R + ++A+ + EE++ +D Y + L
Sbjct: 264 TSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTY---NAL 320
Query: 686 LMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
L Y + + +A+ + +E+ L S + YN+L
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 219 bits (559), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 246/480 (51%), Gaps = 43/480 (8%)
Query: 219 ALNEGYG---NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
+L E Y +T F ++ +Y R +A+S+ + + + P +++YNAV+DA +
Sbjct: 122 SLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIR 181
Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
+ +F +ML + V P+ T+N L+ G + A LF++M +G ++
Sbjct: 182 SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVV 241
Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
TYNTL+D CK ++D F+++ M K + PN+++Y+ +I+G + GR+ + + +EM
Sbjct: 242 TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
G LD V+YNT++ Y K G F +AL++ EM G+ +TY +L+ K G
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
+ +QM+ + PN TY+TL+D +S+ G EA ++ RE G VV Y+AL
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQK 575
I+ C G +E A+++L++M ++G+ P+VV+Y++++ F RS DV+ L ++
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY-------DVDEALRVKR 474
Query: 576 E-------------SANLDAMCSQDDKDVQEAGRTDNQIIKV--------FGQLVAEKAG 614
E S+ + C Q + +EA ++++V + L+
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQ--RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 615 QGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 674
+G E L + +M + + P+VVT+S ++N ++ + +A LL L+LF
Sbjct: 533 EGDLEKA--------LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL--LKLF 582
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 194/354 (54%), Gaps = 1/354 (0%)
Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
G +D+A +F+ +G V ++ LI Y + + + SM L+PNL++Y
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
N VI+ + G K V + +M R G D +T+N+L+ + G + A + EM+
Sbjct: 279 NVVINGLCREG-RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
G+ + TY +L+ ++CK M+ A E + +M + + PN TY+T++DG+++ G ++
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
+A + EM G V+YN +++ + G+ E+A+ V ++M+ G+ D V+Y+ +L
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
G+ + DE R+ +M + P+ +TYS+LI + + KEA ++ E + GL
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
D Y+ALI+A C G +E A+ L +EM ++G+ P+VVTY+ +I+ + + T
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 189/348 (54%), Gaps = 1/348 (0%)
Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
+L K+D + + +G + +++ +I+ R G +E V M R + V
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
TYN +I K G +F + + +MLR+G+ P IT+ SL+ + G A ++
Sbjct: 312 TYNTLIKGYCKEG-NFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
M RG+ + TY TL+D + M+ A+ ++ EM SP+VVTY+ +I+G+ G+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
++DA+ + +MK G+ D VSY+TVLS + + +EAL V +EM GI+ D +TY++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
L+ G+ +Q + E ++E+M + P+ TY+ LI+ Y G ++A+Q+ E + G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
+ DVV YS LI+ L K A LL ++ E P+ VTY+++I+
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 185/410 (45%), Gaps = 51/410 (12%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+ +I+ L R G++ + GY ++ LI Y + G +A+ + M R
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM-------------------------- 290
+ L P+++TY ++I + K G + +E D M
Sbjct: 339 HGLTPSVITYTSLIHSMCKAG-NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 291 -----LR----NGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
LR NG P +T+N+L+ G E A + +M +G+ D+ +Y+T+L
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
C+ +D A + EM K I P+ +TYS++I G+ + R +A +++ EM +G+
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
D +Y +++ Y G E+AL + EM G+ D VTY+ L+ G KQ + E +R+
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 462 FEQMKADCVSPNLLTYSTLIDVYS-----------KG----GLYKEAMQIFREFKQAGLK 506
++ + P+ +TY TLI+ S KG G+ EA Q+F K
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
D Y+ +I C+ G + A +L EM K G + VT +++ A +
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHK 687
Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 162/363 (44%), Gaps = 51/363 (14%)
Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
L G +V +++LI + ++G A+ + M+ L PN TY ++D + G
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY- 395
Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
+ +M NG P +T+N+L+ G E A + +M +G+ D+ +Y+T
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
+L C+ +D A + EM K I P+ +TYS++I G+ + R +A +++ EM +G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
+ D +Y +++ Y G E+AL + EM G+ D VTY+ L+ G KQ + E +
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYS-----------KG----GLYKEAMQIF------- 497
R+ ++ + P+ +TY TLI+ S KG G+ EA Q+F
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 498 ----------------------------REFKQAGLKADVVLYSALIDALCKNGLVESAV 529
+E ++G V AL+ AL K G V
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELN 695
Query: 530 SLL 532
S++
Sbjct: 696 SVI 698
Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 172/398 (43%), Gaps = 55/398 (13%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
YT L+ + G ++A++ R N+ + + ++ + G ++ A +
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE--RTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
+ G+ +V ++ALI+ + +G ++AI+V MK L P++V+Y+ V+ +
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS-Y 464
Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
D + + +M+ G++PD IT++SL+ C + EA +L+ EM+ G+ D FTY
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC-DLYEEMLRVGLPPDEFTY 523
Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA----LNMFS 393
L++A C ++ A ++ EM K + P+VVTYS +I+G K R +A L +F
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 394 E--------------------------------MKFLGIGLDRV--------------SY 407
E MK + D+V +Y
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643
Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
N ++ + + G +A + KEM SG VT AL+ K+GK +E+ + +
Sbjct: 644 NIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLR 703
Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
C L+++ + G + + E + G
Sbjct: 704 SCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 212 bits (540), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 146/528 (27%), Positives = 258/528 (48%), Gaps = 20/528 (3%)
Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREER---KNDQGKLASAMISILGRLGKVDLAKN 214
D L++ L + G W +A+ F + V K D ++ + ILGR + +A
Sbjct: 138 DLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDH-QVIEIFVRILGRESQYSVAAK 196
Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
+ + + Y V A++ ++ AY R+G ++AI +F MK P LVTYN ++D G
Sbjct: 197 LLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFG 256
Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
K G ++ ++ + D+M G++ D T +++L+ C+R GL A+ F E+ G +
Sbjct: 257 KMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGT 316
Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
TYN LL K A ++ EM + + VTY+ ++ Y +AG +A +
Sbjct: 317 VTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEM 376
Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
M G+ + ++Y TV+ Y K G+ +EAL + M+ +G + TYNA+L GK+ +
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
+E+ +M MK++ SPN T++T++ + G+ K ++FRE K G + D ++
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 496
Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA---TTECTVDDVERDL 571
LI A + G A + EMT+ G V TYN++++A R + E + D++
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Query: 572 GKQKESA-NLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK---KENRCRQEIL 627
K E++ +L C + R +N+I + GQ+ +CR
Sbjct: 557 FKPTETSYSLMLQCYAKGGNYLGIERIENRIKE--GQIFPSWMLLRTLLLANFKCR---- 610
Query: 628 CILG---VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
+ G F K KP++V F+++L+ +R N ++ A +LE +R
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 658
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 222/448 (49%), Gaps = 50/448 (11%)
Query: 150 EFKLCGAD----DYTFLLRELGNRGEWSKAIQCFAFAVKREERKND---QGKLASAMISI 202
E K CG + Y LL+ G G +++A+ +V +E +N + +++
Sbjct: 306 ELKSCGYEPGTVTYNALLQVFGKAGVYTEAL-----SVLKEMEENSCPADSVTYNELVAA 360
Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
R G A + E +G ++ +I AYG++G EA+ +F SMK PN
Sbjct: 361 YVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN 420
Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
TYNAV+ GK ++++ DM NG P+R T+N++LA+C G+ + +F
Sbjct: 421 TCTYNAVLSLLGKKSRS-NEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF 479
Query: 323 NEMVHRGIDQDIFTYNTLLDAICK-GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
EM G + D T+NTL+ A + G+++D A ++ EM + V TY+ +++ A+
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVD-ASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG----------RFEEALLV----- 426
G N+ S+MK G SY+ +L YAK G R +E +
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWML 598
Query: 427 ----------CKEMESS----------GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
C+ + S G + D V +N++L + + YD+ + E ++
Sbjct: 599 LRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 658
Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
D +SP+L+TY++L+D+Y + G +A +I + +++ LK D+V Y+ +I C+ GL++
Sbjct: 659 EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQ 718
Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
AV +L EMT+ GIRP + TYN+ + +
Sbjct: 719 EAVRMLSEMTERGIRPCIFTYNTFVSGY 746
Score = 169 bits (428), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 133/532 (25%), Positives = 241/532 (45%), Gaps = 68/532 (12%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
S ++S R G + AK F + GY ++AL+ +G++G EA+SV M+
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
+ + VTYN ++ A + G K + + M + GV P+ IT+ +++ + G +
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFS-KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
A LF M G + TYN +L + K ++ + +++ +M + SPN T++TM+
Sbjct: 404 EALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Query: 377 DGYAKAGRLDDALN-MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
G +D +N +F EMK G DR ++NT++S Y + G +A + EM +G
Sbjct: 464 ALCGNKG-MDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY----- 490
TYNALL ++G + + MK+ P +YS ++ Y+KGG Y
Sbjct: 523 NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIER 582
Query: 491 -----KEAMQIFRE--------------------------FKQAGLKADVVLYSALIDAL 519
KE QIF FK+ G K D+V++++++
Sbjct: 583 IENRIKEG-QIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 641
Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTEC-TVDDVERDLGKQKESA 578
+N + + A +L+ + ++G+ P++VTYNS++D + R EC +++ + L K +
Sbjct: 642 TRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG--ECWKAEEILKTLEKSQLKP 699
Query: 579 NL-------DAMCSQDDKDVQEAGRTDNQI--------IKVFGQLVAEKAGQGKKENRCR 623
+L C + +QEA R +++ I + V+ G
Sbjct: 700 DLVSYNTVIKGFCRRG--LMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAE--- 754
Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 675
I V + M K +PN +TF +++ R + +A + +++ FD
Sbjct: 755 -----IEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFD 801
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 210/462 (45%), Gaps = 40/462 (8%)
Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
+LK+ E C AD T+ L+ G +A K+ N + +I
Sbjct: 338 VLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN--AITYTTVIDA 395
Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
G+ GK D A +F + G ++A++S G+ E I + MK PN
Sbjct: 396 YGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPN 455
Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
T+N ++ CG G+D K V +F +M G +PDR TFN+L++ R G A ++
Sbjct: 456 RATWNTMLALCGNKGMD-KFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMY 514
Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
EM G + + TYN LL+A+ + ++++M +K P +YS M+ YAK
Sbjct: 515 GEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKG 574
Query: 383 G------RLDDALN-----------------------------MFSEMKFLGIGLDRVSY 407
G R+++ + F+ K G D V +
Sbjct: 575 GNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIF 634
Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
N++LSI+ + +++A + + + G+ D VTYN+L+ Y ++G+ + + + ++
Sbjct: 635 NSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEK 694
Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
+ P+L++Y+T+I + + GL +EA+++ E + G++ + Y+ + G+
Sbjct: 695 SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAE 754
Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER 569
+++ M K RPN +T+ ++D + R+ +D V +
Sbjct: 755 IEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSK 796
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 190/426 (44%), Gaps = 40/426 (9%)
Query: 251 FNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML----RNGVQPDRITFNSLL 306
F+S+K L+ +LV+ +D G ++ V +F+ ++ ++ D +
Sbjct: 127 FDSVKSELLRTDLVSLVKGLDDSGH----WERAVFLFEWLVLSSNSGALKLDHQVIEIFV 182
Query: 307 AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNIS 366
+ R + A L +++ + D+ Y T+L A + + + A ++ M S
Sbjct: 183 RILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPS 242
Query: 367 PNVVTYSTMIDGYAKAGR-LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
P +VTY+ ++D + K GR L + EM+ G+ D + +TVLS A+ G EA
Sbjct: 243 PTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKE 302
Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
E++S G VTYNALL +GK G Y E + ++M+ + + +TY+ L+ Y
Sbjct: 303 FFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYV 362
Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
+ G KEA + + G+ + + Y+ +IDA K G + A+ L M + G PN
Sbjct: 363 RAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTC 422
Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVF 605
TYN+++ G+ K + + + +C T N ++ +
Sbjct: 423 TYNAVLSLLGK----------------KSRSNEMIKMLCDMKSNGCSPNRATWNTMLALC 466
Query: 606 GQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDAS 665
G G K NR VF++M +P+ TF+ +++A RC S DAS
Sbjct: 467 GN-----KGMDKFVNR----------VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDAS 511
Query: 666 MLLEEL 671
+ E+
Sbjct: 512 KMYGEM 517
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 139/356 (39%), Gaps = 52/356 (14%)
Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
L + D S +L I + R L+CK K+ V N+++ +
Sbjct: 76 LEVSTDSSSSKPILGIEIENERNGSLKLLCK--------KEVVLVNSIV-----EQPLTG 122
Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF----KQAGLKADVVLYS 513
+ R F+ +K++ + +L++ L+ G ++ A+ +F LK D +
Sbjct: 123 LSRFFDSVKSELLRTDLVS---LVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIE 179
Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
+ L + A LLD++ + +V Y +I+ A+ R+ E +D ER
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFER---- 235
Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
KE + T N I+ VFG K G+ ++ ILGV
Sbjct: 236 MKEMGPSPTLV------------TYNVILDVFG-----KMGRSWRK---------ILGVL 269
Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGY--RD 691
+M +K + T S +L+AC+R +A EL+ + V + L+ +
Sbjct: 270 DEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKA 329
Query: 692 NIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN 747
++ +ALS+ E++ S YN L G + A V+ ++ V N
Sbjct: 330 GVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN 385
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 203/357 (56%), Gaps = 7/357 (1%)
Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
K A + + + +G + + +++ + G A ++ N M++ L+P ++ YN
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 268 AVIDACGKGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
+ID K +KH+ + +F +M G++P+ +T++SL++ G W A L ++
Sbjct: 261 TIIDGLCK----YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
M+ R I+ D+FT++ L+DA K ++ A ++ EM ++I P++VTYS++I+G+ R
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
LD+A MF M D V+YNT++ + K R EE + V +EM G+ + VTYN
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
L+ G + G D + +F++M +D V PN++TY+TL+D K G ++AM +F +++
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
++ + Y+ +I+ +CK G VE L ++ +G++P+VV YN++I F R + E
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 242/495 (48%), Gaps = 35/495 (7%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
S ++S + ++ K D+ ++ E N G + Y +S LI+ + R A++V M +
Sbjct: 85 SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 144
Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
+PN+VT +++++ C + V + D M G QP+ +TFN+L+
Sbjct: 145 LGYEPNIVTLSSLLNGYCHSKRI--SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
A L + MV +G D+ TY +++ +CK DLAF ++ +M + P V+ Y+T+
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
IDG K +DDALN+F EM+ GI + V+Y++++S GR+ +A + +M I
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
D T++AL+ + K+GK E +++++M + P+++TYS+LI+ + EA Q
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
+F DVV Y+ LI CK VE + + EM++ G+ N VTYN +I
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 556 RSATTECTVDDVERDLGKQKESAN-----------LDAMCSQDDKDVQEAGRTDNQIIKV 604
++ +C D+ +++ K+ S LD +C G+ + ++ V
Sbjct: 443 QAG--DC---DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN--------GKLEKAMV-V 488
Query: 605 FGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSR 657
F L K E +C G +F + +KP+VV ++ +++ R
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 658 CNSFEDASMLLEELR 672
S E+A L +E++
Sbjct: 549 KGSKEEADALFKEMK 563
Score = 189 bits (480), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 193/367 (52%), Gaps = 3/367 (0%)
Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
L + G DLA N+ V ++ +I + + +A+++F M+ ++PN
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
+VTY+++I C G + + DM+ + PD TF++L+ + G A L
Sbjct: 291 VVTYSSLISCLCNYG--RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
++EMV R ID I TY++L++ C ++D A ++ M +K+ P+VVTY+T+I G+ K
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
R+++ + +F EM G+ + V+YN ++ + G + A + KEM S G+ + +T
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
YN LL G K GK ++ +FE ++ + P + TY+ +I+ K G ++ +F
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
G+K DVV Y+ +I C+ G E A +L EM ++G PN YN++I A R E
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 562 CTVDDVE 568
+ + ++
Sbjct: 589 ASAELIK 595
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 200/390 (51%), Gaps = 7/390 (1%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
Y ++ L RG+ A F K E+ K + G L + +I L + +D A N+F+
Sbjct: 224 YGVVVNGLCKRGDTDLA---FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
+G V +S+LIS G +A + + M + P++ T++A+IDA K G
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
+++D+M++ + P +T++SL+ C L EA + +F MV + D+ T
Sbjct: 341 -KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA-KQMFEFMVSKHCFPDVVT 398
Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
YNTL+ CK +++ E+ EM + + N VTY+ +I G +AG D A +F EM
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
G+ + ++YNT+L K G+ E+A++V + ++ S + TYN ++ G K GK +
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
+ +F + V P+++ Y+T+I + + G +EA +F+E K+ G + Y+ LI
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
A ++G E++ L+ EM G + T
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 210/431 (48%), Gaps = 45/431 (10%)
Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
V +F +M+++ P I F+ LL+ ++ ++ +L +M + GI + +TY+ L++
Sbjct: 66 VALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINC 125
Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
C+ +Q+ LA ++ +M PN+VT S++++GY + R+ +A+ + +M G +
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185
Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
V++NT++ + EA+ + M + G + D VTY ++ G K+G D +
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245
Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
+M+ + P +L Y+T+ID K +A+ +F+E + G++ +VV YS+LI LC G
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVER---DLGKQKES 577
A LL +M + I P+V T++++IDAF G+ E D++ + D S
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 578 ANLDAMCSQDDKDVQEAGR---------------TDNQIIKVFG---------QLVAEKA 613
+ ++ C D D EA + T N +IK F ++ E +
Sbjct: 366 SLINGFCMHDRLD--EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 614 GQGKKENRCRQEILCILGVFQ------------KMHKLKIKPNVVTFSAILNACSRCNSF 661
+G N IL I G+FQ +M + PN++T++ +L+ +
Sbjct: 424 QRGLVGNTVTYNIL-IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 662 EDASMLLEELR 672
E A ++ E L+
Sbjct: 483 EKAMVVFEYLQ 493
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 209 bits (531), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 148/515 (28%), Positives = 251/515 (48%), Gaps = 8/515 (1%)
Query: 162 LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALN 221
L L + G +AIQCF+ +KR R + + + ++ +LGK D K F+ +
Sbjct: 198 LFSVLIDLGMLEEAIQCFS-KMKRF-RVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIG 255
Query: 222 EGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
G TV+ ++ +I + G + A +F MK L P+ VTYN++ID GK G
Sbjct: 256 AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG-RLD 314
Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
V F++M +PD IT+N+L+ + G + EM G+ ++ +Y+TL+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
DA CK M A + +M + PN TY+++ID K G L DA + +EM +G+
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
+ V+Y ++ R +EA + +M+++G+ + +YNAL+ G+ K D +
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
++K + P+LL Y T I + A + E K+ G+KA+ ++Y+ L+DA K
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER---DLGKQKESA 578
+G + LLDEM + I VVT+ +ID ++ VD R D G Q +A
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 579 NLDAMCSQDDKDVQ-EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKM 636
AM KD Q EA T + + G + A + +Q +L L + KM
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674
Query: 637 HKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
++ +K +++ +++++ S CN + A LEE+
Sbjct: 675 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 194/427 (45%), Gaps = 74/427 (17%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
++MI G++G++D FE + V ++ALI+ + + G + + MK
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
LKPN+V+Y+ ++DA K G+ + ++ + DM R G+ P+ T+ SL+ A C G L
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGM-MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 419
Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
+A R L NEM+ G++ ++ TY L+D +C +M A E+ +M + PN+ +Y+ +
Sbjct: 420 DAFR-LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
Query: 376 IDGYAKAGRLDDALNMFSE-----------------------------------MKFLGI 400
I G+ KA +D AL + +E MK GI
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMES---------------------------- 432
+ + Y T++ Y K G E L + EM+
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598
Query: 433 --------SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
G++ +A + A++ G K + + +FEQM + P+ Y++L+D
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658
Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
K G EA+ + + + G+K D++ Y++L+ L ++ A S L+EM EGI P+
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718
Query: 545 VTYNSII 551
V S++
Sbjct: 719 VLCISVL 725
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 172/411 (41%), Gaps = 70/411 (17%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+A+I+ + GK+ + + G V ++S L+ A+ + G Q+AI + M+R
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395
Query: 257 YNLKPNLVTYNAVIDA-CGKG---------------GVDF------------------KH 282
L PN TY ++IDA C G GV++ K
Sbjct: 396 VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE 455
Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
E+F M GV P+ ++N+L+ + + A L NE+ RGI D+ Y T +
Sbjct: 456 AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515
Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
+C +++ A +M EM I N + Y+T++D Y K+G + L++ EMK L I +
Sbjct: 516 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 575
Query: 403 DRVSYNTVL-----------------------------SIYAKL-------GRFEEALLV 426
V++ ++ +I+ + + E A +
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635
Query: 427 CKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSK 486
++M G+ D Y +L+ G KQG E + ++M + +LL Y++L+ S
Sbjct: 636 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 695
Query: 487 GGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
++A E G+ D VL +++ + G ++ AV L + K
Sbjct: 696 CNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 206 bits (523), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 137/529 (25%), Positives = 250/529 (47%), Gaps = 34/529 (6%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
S S + R + +L + + G + +Y + +I+ + R A SV + +
Sbjct: 92 SRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMK 151
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
+P+ T+N +I G V + D M+ NG QPD +T+NS++ R G
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEG-KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
A +L +M R + D+FTY+T++D++C+ +D A + EM K I +VVTY++++
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
G KAG+ +D + +M I + +++N +L ++ K G+ +EA + KEM + GI
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
+ +TYN L+ GY Q + E M + M + SP+++T+++LI Y + M++
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
FR + GL A+ V YS L+ C++G ++ A L EM G+ P+V+TY ++D
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450
Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
+ E ++ E DL K K I ++ ++ G
Sbjct: 451 NGKLEKALEIFE-DLQKSKMDLG----------------------IVMYTTIIEGMCKGG 487
Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
K E+ +F + +KPNV+T++ +++ + S +A++LL ++ N
Sbjct: 488 KVEDA--------WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539
Query: 677 QVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
+ L+ RD + L +E+K S ++ + DML
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 191/400 (47%), Gaps = 12/400 (3%)
Query: 139 DVSLG-DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKL 195
D SL D+L+K E + AD +T+ ++ L G AI F K E K + +
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF----KEMETKGIKSSV 263
Query: 196 AS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
+ +++ L + GK + + + ++ V F+ L+ + + G QEA ++
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
M + PN++TYN ++D C + + D M+RN PD +TF SL+
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQN--RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
+ +F + RG+ + TY+ L+ C+ ++ LA E+ EM + + P+V+TY
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
++DG G+L+ AL +F +++ + L V Y T++ K G+ E+A + +
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
G++ + +TY ++ G K+G E + +M+ D +PN TY+TLI + + G
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561
Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
+ ++ E K G AD +ID L L +S + +L
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDML 601
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 210/469 (44%), Gaps = 51/469 (10%)
Query: 276 GGVDFKH--VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
G VD K + +F +M+R+ P + F+ + +R + + ++ GI +
Sbjct: 63 GIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHN 122
Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
I+T N +++ C+ + A+ ++ ++ P+ T++T+I G G++ +A+ +
Sbjct: 123 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVD 182
Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
M G D V+YN++++ + G AL + ++ME ++ D TY+ ++ + G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
D +F++M+ + +++TY++L+ K G + + + ++ + +V+ ++
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
L+D K G ++ A L EM GI PN++TYN+++D + +
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ--------------NR 348
Query: 574 QKESAN-LDAM----CSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
E+ N LD M CS D T +IK G + ++ G K
Sbjct: 349 LSEANNMLDLMVRNKCSPDIV-------TFTSLIK--GYCMVKRVDDGMK---------- 389
Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL----RLFDNQVYGVAHG 684
VF+ + K + N VT+S ++ + + A L +E+ L D YG+
Sbjct: 390 ---VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI--- 443
Query: 685 LLMGYRDNIWVQ-ALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
LL G DN ++ AL +F++++ Y + + + G+ A
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Score = 37.0 bits (84), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 107/264 (40%), Gaps = 39/264 (14%)
Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
+A+ +F+E ++ +V +S A+ + + ++ GI N+ T N +I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 552 DAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAE 611
+ F R T C V LGK + + T N +IK G +
Sbjct: 131 NCFCRCCKT-CFAYSV---LGKVMKLG------------YEPDTTTFNTLIK--GLFLEG 172
Query: 612 KAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
K + + + +M + +P+VVT+++I+N R D S+ L+ L
Sbjct: 173 KVSEA-------------VVLVDRMVENGCQPDVVTYNSIVNGICRSG---DTSLALDLL 216
Query: 672 RLFDNQ-----VYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHF 726
R + + V+ + + RD A+SLF E++ ++ YN+L L
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 727 GQKRGAQLVVLEGKRRQVWENVWS 750
G+ L++ + R++ NV +
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVIT 300
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 204 bits (519), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 208/387 (53%), Gaps = 11/387 (2%)
Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
+V LA +I L GY +L++ + R +A+S+ + M KP++V YN
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 268 AVIDACGKGGVDFKHVVEIFD---DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
A+ID+ K K V + FD ++ R G++P+ +T+ +L+ W A L ++
Sbjct: 195 AIIDSLCKT----KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250
Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
M+ + I ++ TY+ LLDA K ++ A E+ EM +I P++VTYS++I+G R
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
+D+A MF M G D VSYNT+++ + K R E+ + + +EM G+ + VTYN
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
L+ G+ + G D+ + F QM +SP++ TY+ L+ G ++A+ IF + ++
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV 564
+ D+V Y+ +I +CK G VE A SL ++ +G++P++VTY +++ T+ +
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL----CTKGLL 486
Query: 565 DDVERDLGKQKESANLDAMCSQDDKDV 591
+VE K K+ + C+ D D+
Sbjct: 487 HEVEALYTKMKQEGLMKNDCTLSDGDI 513
Score = 186 bits (471), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 192/349 (55%), Gaps = 1/349 (0%)
Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
++++ R +V A ++ + + GY + A++A+I + ++ +A F ++R
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 258 NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
++PN+VTY A+++ + + DM++ + P+ IT+++LL + G
Sbjct: 220 GIRPNVVTYTALVNGLCNSS-RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
A+ LF EMV ID DI TY++L++ +C ++D A ++ M +K +VV+Y+T+I+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
G+ KA R++D + +F EM G+ + V+YNT++ + + G ++A +M+ GI
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
D TYN LLGG G+ ++ +FE M+ + +++TY+T+I K G +EA +F
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVT 546
GLK D+V Y+ ++ LC GL+ +L +M +EG+ N T
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 183/349 (52%), Gaps = 9/349 (2%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+A+I L + +V+ A + F+ +G V ++AL++ S +A + + M +
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
+ PN++TY+A++DA K G E+F++M+R + PD +T++SL+ +
Sbjct: 254 KKITPNVITYSALLDAFVKNG-KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
A +F+ MV +G D+ +YNTL++ CK +++ ++ EM + + N VTY+T+I
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
G+ +AG +D A FS+M F GI D +YN +L G E+AL++ ++M+ +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
D VTY ++ G K GK +E +F + + P+++TY+T++ GL E +
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
+ + KQ GL + D +G + + L+ +M G P+++
Sbjct: 493 YTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPSLL 533
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 155/284 (54%)
Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
+ +++F DM+++ P + FN LL+ + ++ +L +M GI D++T+
Sbjct: 64 IKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
N +++ C Q+ LA I+ +M P+ VT ++++G+ + R+ DA+++ +M
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
+G D V+YN ++ K R +A KE+E GIR + VTY AL+ G ++ +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
R+ M ++PN++TYS L+D + K G EA ++F E + + D+V YS+LI+
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
LC + ++ A + D M +G +VV+YN++I+ F ++ E
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Score = 129 bits (325), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 151/321 (47%), Gaps = 40/321 (12%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
YT L+ L N WS A + + +K++ N
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPN---------------------------- 259
Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
V +SAL+ A+ ++G EA +F M R ++ P++VTY+++I+ C
Sbjct: 260 ---------VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
+D + ++FD M+ G D +++N+L+ + E LF EM RG+ + TY
Sbjct: 311 IDEAN--QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
NTL+ + +D A E ++M ISP++ TY+ ++ G G L+ AL +F +M+
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
+ LD V+Y TV+ K G+ EEA + + G++ D VTY ++ G +G E
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488
Query: 458 VRRMFEQMKADCVSPNLLTYS 478
V ++ +MK + + N T S
Sbjct: 489 VEALYTKMKQEGLMKNDCTLS 509
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 122/280 (43%), Gaps = 53/280 (18%)
Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
K ++ +F M P+++ ++ L+ K Y + + ++ + G++ D+ ++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVER--DL 571
+I+ C V A+S+L +M K G P+ VT S+++ F R V V++ ++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 572 GKQKE----SANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL 627
G + + +A +D++C K V +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKT--KRVNDA--------------------------------- 209
Query: 628 CILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL---RLFDNQVYGVAHG 684
F+++ + I+PNVVT++A++N + + DA+ LL ++ ++ N +
Sbjct: 210 --FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI--TYSA 265
Query: 685 LLMGYRDNIWV-QALSLFDEVKLM----DSSTASAFYNAL 719
LL + N V +A LF+E+ M D T S+ N L
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 140/532 (26%), Positives = 249/532 (46%), Gaps = 40/532 (7%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+ MI+ R K+ A ++ A GY FS L++ + G EA+++ + M
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
+P+LVT + +I+ C KG V + + D M+ G QPD +T+ +L + G
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRV--SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
A +LF +M R I + Y+ ++D++CK D A + EM K I +VVTYS++
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
I G G+ DD M EM I D V+++ ++ ++ K G+ EA + EM + GI
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
D +TYN+L+ G+ K+ E +MF+ M + P+++TYS LI+ Y K + M+
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
+FRE GL + + Y+ L+ C++G + +A L EM G+ P+VVTY ++D
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
+ ++ E+ QK L I ++ ++
Sbjct: 467 DNGELNKALEIFEK---MQKSRMTLG--------------------IGIYNIIIHGMCNA 503
Query: 616 GKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR--- 672
K ++ +F + +KP+VVT++ ++ + S +A ML +++
Sbjct: 504 SKVDDA--------WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 673 -LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDML 723
D+ Y + +G + + ++ L +E+K+ S S+ + DML
Sbjct: 556 CTPDDFTYNILIRAHLG--GSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 189/397 (47%), Gaps = 17/397 (4%)
Query: 144 DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA--SAM 199
D+ +K E + A Y+ ++ L G + A+ F E K + + S++
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF----NEMEMKGIKADVVTYSSL 286
Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
I L GK D + + V FSALI + + G EA ++N M +
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAAR 319
P+ +TYN++ID K ++FD M+ G +PD +T++ L+ + +
Sbjct: 347 APDTITYNSLIDGFCKENC-LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 320 NLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGY 379
LF E+ +G+ + TYNTL+ C+ +++ A E+ EM ++ + P+VVTY ++DG
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Query: 380 AKAGRLDDALNMFSEMK----FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
G L+ AL +F +M+ LGIG+ YN ++ + ++A + + G+
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGI----YNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
+ D VTYN ++GG K+G E +F +MK D +P+ TY+ LI + G +++
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE 581
Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
+ E K G AD +ID L L +S + +L
Sbjct: 582 LIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDML 618
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 187/398 (46%), Gaps = 33/398 (8%)
Query: 276 GGVDFK--HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
G VD K +++F+ M+++ P I FN L + +R ++ M GI+ D
Sbjct: 45 GIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHD 104
Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
++T +++ C+ ++ AF ++ P+ +T+ST+++G+ GR+ +A+ +
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD 164
Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
M + D V+ +T+++ GR EAL++ M G + D VTY +L K G
Sbjct: 165 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
+F +M+ + +++ YS +ID K G + +A+ +F E + G+KADVV YS
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284
Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
+LI LC +G + +L EM I P+VVT++++ID F + E L +
Sbjct: 285 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK-----------EGKLLE 333
Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
KE N + + T N +I F KEN C E +F
Sbjct: 334 AKELYN-----EMITRGIAPDTITYNSLIDGFC-----------KEN-CLHE---ANQMF 373
Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
M +P++VT+S ++N+ + +D L E+
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 203 bits (516), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 140/496 (28%), Positives = 231/496 (46%), Gaps = 37/496 (7%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
S MI+ R K+ LA + + GY FS LI+ G EA+ + + M
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
KP L+T NA+++ C G V V + D M+ G QP+ +T+ +L V + G
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKV--SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
A L +M R I D Y+ ++D +CK +D AF + EM K +++ Y+T+
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
I G+ AGR DD + +M I D V+++ ++ + K G+ EA + KEM GI
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
D VTY +L+ G+ K+ + D+ M + M + PN+ T++ LI+ Y K L + ++
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
+FR+ G+ AD V Y+ LI C+ G +E A L EM +RP++V+Y ++D
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 556 RSATTECTVDDVER--------DLG-----------KQKESANLDAMCSQDDKDVQEAGR 596
+ E ++ E+ D+G K D CS K V+ +
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528
Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
T N +I G KK + ++L F+KM + PN T++ ++ A
Sbjct: 529 TYNIMI----------GGLCKKGSLSEADLL-----FRKMEEDGHSPNGCTYNILIRAHL 573
Query: 657 RCNSFEDASMLLEELR 672
++ L+EE++
Sbjct: 574 GEGDATKSAKLIEEIK 589
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 193/397 (48%), Gaps = 5/397 (1%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFE 217
Y +L+ + G+ + A++ K EERK + S +I L + G +D A N+F
Sbjct: 215 YGPVLKVMCKSGQTALAMELLR---KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271
Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
+G+ + ++ LI + +G + + M + + P++V ++A+ID K G
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331
Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
+ E+ +M++ G+ PD +T+ SL+ + + A ++ + MV +G +I T+
Sbjct: 332 -KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF 390
Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
N L++ CK +D E+ +M + + + VTY+T+I G+ + G+L+ A +F EM
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450
Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
+ D VSY +L G E+AL + +++E S + D YN ++ G K D+
Sbjct: 451 RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510
Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
+F + V P++ TY+ +I K G EA +FR+ ++ G + Y+ LI
Sbjct: 511 AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIR 570
Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
A G + L++E+ + G + T ++D
Sbjct: 571 AHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 156/306 (50%), Gaps = 3/306 (0%)
Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
V AFSALI + + G +EA + M + + P+ VTY ++ID C + +D + +
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN--HM 374
Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
D M+ G P+ TFN L+ + L + LF +M RG+ D TYNTL+ C+
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
++++A E+ EM ++ + P++V+Y ++DG G + AL +F +++ + LD
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
YN ++ + ++A + + G++ D TYN ++GG K+G E +F +M+
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
D SPN TY+ LI + G ++ ++ E K+ G D ++D L L +
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKK 614
Query: 527 SAVSLL 532
S + +L
Sbjct: 615 SFLDML 620
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 146/281 (51%), Gaps = 2/281 (0%)
Query: 276 GGVDFKH--VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
G VD K V++F +M R+ +P I F+ L +V +R ++ +L +M +GI +
Sbjct: 47 GIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHN 106
Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
++T + +++ C+ ++ LAF M ++ P+ VT+ST+I+G GR+ +AL +
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD 166
Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
M +G ++ N +++ G+ +A+L+ M +G + + VTY +L K G
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226
Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
+ + +M+ + + + YS +ID K G A +F E + G KAD+++Y+
Sbjct: 227 QTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYT 286
Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
LI C G + LL +M K I P+VV ++++ID F
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 97/200 (48%), Gaps = 7/200 (3%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+ +I LGK+++AK +F+ ++ + ++ L+ +G ++A+ +F +++
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
++ ++ YN +I C VD ++F + GV+PD T+N ++ +C +G L
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVD--DAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
EA LF +M G + TYN L+ A + +++ E+ S + T
Sbjct: 544 SEADL-LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM 602
Query: 375 MIDGYAKAGRLDDA-LNMFS 393
++D + GRL + L+M S
Sbjct: 603 VVDMLSD-GRLKKSFLDMLS 621
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 198/373 (53%), Gaps = 5/373 (1%)
Query: 207 GKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
G+V+ A N + N+ G+ Y F+ L++ ++G+ + AI + + M + P++ T
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
YN+VI K G + K VE+ D M+ P+ +T+N+L++ + E A L +
Sbjct: 333 YNSVISGLCKLG-EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
+GI D+ T+N+L+ +C +A E+ EM +K P+ TY+ +ID G+L
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
D+ALNM +M+ G ++YNT++ + K + EA + EME G+ +++VTYN L
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
+ G K + ++ ++ +QM + P+ TY++L+ + +GG K+A I + G
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-FGRSATTECTV 564
+ D+V Y LI LCK G VE A LL + +GI YN +I F + TTE
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI- 630
Query: 565 DDVERDLGKQKES 577
++ R++ +Q E+
Sbjct: 631 -NLFREMLEQNEA 642
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 188/357 (52%), Gaps = 4/357 (1%)
Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN-LKPNLVT 265
G +D A I E + G + + + ++ + + G ++A++ M + P+ T
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNE 324
+N +++ K G KH +EI D ML+ G PD T+NS+++ +C G + EA + ++
Sbjct: 298 FNTLVNGLCKAG-HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE-VLDQ 355
Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
M+ R + TYNTL+ +CK Q++ A E+ + +K I P+V T++++I G
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
A+ +F EM+ G D +YN ++ G+ +EAL + K+ME SG + +TYN
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
L+ G+ K K E +F++M+ VS N +TY+TLID K ++A Q+ + G
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
K D Y++L+ C+ G ++ A ++ MT G P++VTY ++I ++ E
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Score = 180 bits (456), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 183/356 (51%), Gaps = 4/356 (1%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+ +++ L + G V A I + L EGY VY ++++IS + G +EA+ V + M
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
+ PN VTYN +I C + V+ E+ + G+ PD TFNSL+
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVE--EATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
A LF EM +G + D FTYN L+D++C ++D A ++ +M + +V+TY+T+
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
IDG+ KA + +A +F EM+ G+ + V+YNT++ K R E+A + +M G
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
+ D TYN+LL + + G + + + M ++ P+++TY TLI K G + A +
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG-IRPNVVTYNSI 550
+ R + G+ Y+ +I L + A++L EM ++ P+ V+Y +
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 220/489 (44%), Gaps = 43/489 (8%)
Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
G V F+ LI A R+ + AI + M Y L P+ T+ V+ + G D
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG-DLDG 242
Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR-GIDQDIFTYNTLL 341
+ I + M+ G ++ N ++ + G E A N EM ++ G D +T+NTL+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
+ +CK + A EIM M + P+V TY+++I G K G + +A+ + +M
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
+ V+YNT++S K + EEA + + + S GI D T+N+L+ G + +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 462 FEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
FE+M++ P+ TY+ LID G EA+ + ++ + +G V+ Y+ LID CK
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL- 580
A + DEM G+ N VTYN++ID +S E ++A L
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE--------------DAAQLM 528
Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
D M + K + T N ++ F + G KK + Q M
Sbjct: 529 DQMIMEGQKPDK---YTYNSLLTHFC-----RGGDIKKAA----------DIVQAMTSNG 570
Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRL----FDNQVYG-VAHGLLMGYRDNIWV 695
+P++VT+ +++ + E AS LL +++ Y V GL +R
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL---FRKRKTT 627
Query: 696 QALSLFDEV 704
+A++LF E+
Sbjct: 628 EAINLFREM 636
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 238/504 (47%), Gaps = 41/504 (8%)
Query: 247 AISVFN-SMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
A+ +FN + K+ N P Y ++ G+ G F + +I +DM + + TF L
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSG-SFDDMKKILEDMKSSRCEMGTSTFLIL 124
Query: 306 LAVCSRGGLWEAARNLFNEMVHR-GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
+ ++ L + ++ + M+ G+ D YN +L+ + G + L A+M
Sbjct: 125 IESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWG 184
Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
I P+V T++ +I +A +L A+ M +M G+ D ++ TV+ Y + G + AL
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM-KADCVSPNLLTYSTLIDV 483
+ ++M G V+ N ++ G+ K+G+ ++ ++M D P+ T++TL++
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
K G K A++I Q G DV Y+++I LCK G V+ AV +LD+M PN
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
VTYN++I +T C + VE E+ L + + K + T N +I+
Sbjct: 365 TVTYNTLI-------STLCKENQVE-------EATELARVLTS--KGILPDVCTFNSLIQ 408
Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
G + + +R E+ F++M +P+ T++ ++++ ++
Sbjct: 409 --GLCLT-------RNHRVAMEL------FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDE 453
Query: 664 ASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
A +L+++ L + + L+ G+ + N +A +FDE+++ S S YN L D
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLID 513
Query: 722 MLWHFGQ-KRGAQL---VVLEGKR 741
L + + AQL +++EG++
Sbjct: 514 GLCKSRRVEDAAQLMDQMIMEGQK 537
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
+IS L + G+V++A + + +G T +A++ +I R EAI++F M
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Query: 258 N-LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
N P+ V+Y V GG + V+ ++L G P+ F+SL
Sbjct: 640 NEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE---FSSL 685
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 208/398 (52%), Gaps = 38/398 (9%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR---------------- 240
+ +++++ ++ K D+ ++ N G + +Y+F+ LI + R
Sbjct: 83 TRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMK 142
Query: 241 --------------SGYCQ-----EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFK 281
+G+CQ EA+S+ +SM + PN+V YN VI+ K D
Sbjct: 143 LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR-DLN 201
Query: 282 HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLL 341
+ +E+F M + G++ D +T+N+L++ S G W A L +MV R ID ++ + L+
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 342 DAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIG 401
D K + A + EM +++ PNV TY+++I+G+ G L DA MF M G
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 402 LDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRM 461
D V+YNT+++ + K R E+ + + EM G+ DA TYN L+ GY + GK + +++
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 462 FEQMKADC-VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
F +M DC VSP+++TY+ L+D G ++A+ + + +++ + D++ Y+ +I LC
Sbjct: 382 FNRM-VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440
Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
+ ++ A L +T++G++P+ + Y ++I R
Sbjct: 441 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 202/428 (47%), Gaps = 39/428 (9%)
Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
+ F +F +ML++ P + F +L V ++ ++ L+++M + GI D++++
Sbjct: 58 IKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 117
Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
L+ C+ +++ LA ++ +M P++VT ++++G+ + R +A+++ M
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
G + V YNTV++ K AL V ME GIR DAVTYN L+ G G++ +
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
R+ M + PN++ ++ LID + K G EA +++E + + +V Y++LI+
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
C +G + A + D M +G P+VVTYN++I F +S E
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE---------------- 341
Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
+ C + + T N +I + Q A K +K VF +M
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ--AGKLNVAQK-------------VFNRMV 386
Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQA 697
+ P++VT++ +L+ E A +++E+L+ + V + + NI +Q
Sbjct: 387 DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY--------NIIIQG 438
Query: 698 LSLFDEVK 705
L D++K
Sbjct: 439 LCRTDKLK 446
Score = 149 bits (377), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 156/302 (51%), Gaps = 3/302 (0%)
Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
A +F +G ++ LIS SG +A + M + + PN++ + A+ID
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGI 330
K G + ++ +M+R V P+ T+NSL+ C G L +A + +F+ MV +G
Sbjct: 263 TFVKEG-NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA-KYMFDLMVSKGC 320
Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390
D+ TYNTL+ CK +++ ++ EM + + + TY+T+I GY +AG+L+ A
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 391 MFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYG 450
+F+ M G+ D V+YN +L G+ E+AL++ ++++ S + D +TYN ++ G
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440
Query: 451 KQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVV 510
+ K E +F + V P+ + Y T+I + GL +EA ++ R K+ G
Sbjct: 441 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSER 500
Query: 511 LY 512
+Y
Sbjct: 501 IY 502
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 187/391 (47%), Gaps = 6/391 (1%)
Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
K D A ++F L ++ F+ +++ + I +++ M+ + +L ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
+I C + + M++ G +P +T SLL +G ++ A +L + M
Sbjct: 119 ILIH-CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
G ++ YNT+++ +CK ++ A E+ M K I + VTY+T+I G + +GR D
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
A + +M I + + + ++ + K G EA + KEM + + TYN+L+
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
G+ G + + MF+ M + P+++TY+TLI + K ++ M++F E GL
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
D Y+ LI C+ G + A + + M G+ P++VTYN ++D + E + V
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 568 ERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
E DL QK ++D + + +Q RTD
Sbjct: 418 E-DL--QKSEMDVDII--TYNIIIQGLCRTD 443
Score = 136 bits (342), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 178/352 (50%), Gaps = 9/352 (2%)
Query: 137 RDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA 196
++ VSL D + F F + Y ++ L + + A++ F K+ R +
Sbjct: 166 QEAVSLVDSMDGFGF-VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD--AVTY 222
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+ +IS L G+ A + + V F+ALI + + G EA +++ M R
Sbjct: 223 NTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR 282
Query: 257 YNLKPNLVTYNAVIDA-CGKGGV-DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
++ PN+ TYN++I+ C G + D K+ +FD M+ G PD +T+N+L+ +
Sbjct: 283 RSVVPNVFTYNSLINGFCIHGCLGDAKY---MFDLMVSKGCFPDVVTYNTLITGFCKSKR 339
Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
E LF EM ++G+ D FTYNTL+ C+ ++++A ++ M +SP++VTY+
Sbjct: 340 VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 399
Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
++D G+++ AL M +++ + +D ++YN ++ + + +EA + + + G
Sbjct: 400 LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459
Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTY-STLIDVYS 485
++ DA+ Y ++ G ++G E ++ +MK D P+ Y TL D Y+
Sbjct: 460 VKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYT 511
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 183/432 (42%), Gaps = 46/432 (10%)
Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
+ D AF + EM P++V ++ ++ AK + D + ++ +M+ LGI D S+
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
++ + + R AL + +M G R VT +LL G+ + ++ E + + M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
PN++ Y+T+I+ K A+++F ++ G++AD V Y+ LI L +G A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
LL +M K I PNV+ + ++ID F + G E+ NL
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKE--------------GNLLEARNLYK--EMIR 282
Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
+ V T N +I G + G K +F M P+VVT+
Sbjct: 283 RSVVPNVFTYNSLIN--GFCIHGCLGDAKY-------------MFDLMVSKGCFPDVVTY 327
Query: 649 SAILNACSRCNSFEDASMLLEELR----LFDNQVYG-VAHGLLMGYRDNIWVQALSLFDE 703
+ ++ + ED L E+ + D Y + HG + N+ A +F+
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV---AQKVFNR 384
Query: 704 VKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGA 763
+ S YN L D L + G+ A ++V + ++ ++ ++ + +++ G
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDI-----ITYNIIIQGL 439
Query: 764 ARA--MVHAWLL 773
R + AW L
Sbjct: 440 CRTDKLKEAWCL 451
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 191/362 (52%), Gaps = 1/362 (0%)
Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
+L + +I + G A + A G ++ISA SG EA ++F
Sbjct: 270 QLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEE 329
Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
+++ +KP YNA++ K G K + +M + GV PD T++ L+ G
Sbjct: 330 LRQSGIKPRTRAYNALLKGYVKTG-PLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAG 388
Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
WE+AR + EM + + F ++ LL + F+++ EM + + P+ Y+
Sbjct: 389 RWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYN 448
Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
+ID + K LD A+ F M GI DRV++NT++ + K GR A + + ME
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508
Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
G A TYN ++ YG Q ++D+++R+ +MK+ + PN++T++TL+DVY K G + +A
Sbjct: 509 GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDA 568
Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
++ E K GLK +Y+ALI+A + GL E AV+ MT +G++P+++ NS+I+A
Sbjct: 569 IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINA 628
Query: 554 FG 555
FG
Sbjct: 629 FG 630
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 196/410 (47%), Gaps = 40/410 (9%)
Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNT 227
G+ SKA+Q A + K A+ ++IS L G+ A+ +FE G
Sbjct: 283 GDPSKALQLLGMA----QATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPR 338
Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV--------- 278
A++AL+ Y ++G ++A S+ + M++ + P+ TY+ +IDA G
Sbjct: 339 TRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLK 398
Query: 279 -------------------------DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGG 313
+++ ++ +M GV+PDR +N ++ +
Sbjct: 399 EMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFN 458
Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
+ A F+ M+ GI+ D T+NTL+D CK + +A E+ M + P TY+
Sbjct: 459 CLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYN 518
Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
MI+ Y R DD + +MK GI + V++ T++ +Y K GRF +A+ +EM+S
Sbjct: 519 IMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSV 578
Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
G++ + YNAL+ Y ++G ++ F M +D + P+LL ++LI+ + + EA
Sbjct: 579 GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEA 638
Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
+ + K+ G+K DVV Y+ L+ AL + + + +EM G +P+
Sbjct: 639 FAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 153/291 (52%), Gaps = 1/291 (0%)
Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
+ FS L++ + G Q+ V MK +KP+ YN VID GK H + FD
Sbjct: 410 FVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNC-LDHAMTTFD 468
Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
ML G++PDR+T+N+L+ + G A +F M RG TYN ++++
Sbjct: 469 RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 528
Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
+ D ++ +M ++ I PNVVT++T++D Y K+GR +DA+ EMK +G+ YN
Sbjct: 529 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 588
Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
+++ YA+ G E+A+ + M S G++ + N+L+ +G+ + E + + MK +
Sbjct: 589 ALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKEN 648
Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
V P+++TY+TL+ + +++ ++ E +G K D S L AL
Sbjct: 649 GVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/533 (22%), Positives = 240/533 (45%), Gaps = 77/533 (14%)
Query: 195 LASAMISILGRLGKVDLAKNIFET-ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
L S +I LGR ++ ++E L++ T ++ALI A R+ ++A+++
Sbjct: 169 LYSILIHALGR------SEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAK 222
Query: 254 MKRYNLKPNLVTYNAVIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
M++ + + V Y+ VI + + +D ++ ++ ++ R+ ++ D N ++ ++
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
G A L G+ T +++ A+ + A + E+ I P Y
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
+ ++ GY K G L DA +M SEM+ G+ D +Y+ ++ Y GR+E A +V KEME+
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 433 SGIRKDAVTYNALLGGYGKQGK----------------------YDEVRR---------- 460
++ ++ ++ LL G+ +G+ Y+ V
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 461 ---MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
F++M ++ + P+ +T++TLID + K G + A ++F ++ G Y+ +I+
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQK 575
+ + LL +M +GI PNVVT+ +++D +G+S ++ +E + +G +
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 576 ESANLDAMC--------SQDDKDVQEAGRTD---------NQIIKVFGQLVAEKAGQGKK 618
S +A+ S+ + +D N +I FG
Sbjct: 583 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFG------------ 630
Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
E+R E +L Q M + +KP+VVT++ ++ A R + F+ ++ EE+
Sbjct: 631 EDRRDAEAFAVL---QYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/532 (23%), Positives = 226/532 (42%), Gaps = 96/532 (18%)
Query: 197 SAMISILGRLGKVDLAKNIFETA------LNEGYGNTVYAFSALISAYGRSGYCQE---- 246
S ++ L R G V+LA + + LN + V ++ A+ + Y S
Sbjct: 85 SPLLKFLSRFGPVELALDSESESEASPESLNPVEFDLVESYRAVPAPYWHSLIKSLTSST 144
Query: 247 -----AISVFNSMKRYNLKPNL-VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
A +V + ++++NL + + Y+ +I A G+ + + E F + + P +
Sbjct: 145 SSLGLAYAVVSWLQKHNLCFSYELLYSILIHALGRS----EKLYEAFLLSQKQTLTP--L 198
Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD--------- 351
T+N+L+ C+R E A NL +M G D Y+ ++ ++ + ++D
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 352 ----------------------------LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
A +++ A +S T ++I A +G
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
R +A +F E++ GI +YN +L Y K G ++A + EME G+ D TY+
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
L+ Y G+++ R + ++M+A V PN +S L+ + G +++ Q+ +E K
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 438
Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGRSATT 560
G+K D Y+ +ID K ++ A++ D M EGI P+ VT+N++ID GR
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 498
Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
E + +ER + T N +I +G Q + ++
Sbjct: 499 EEMFEAMER-------------------RGCLPCATTYNIMINSYGD-------QERWDD 532
Query: 621 RCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
R +LG KM I PNVVT + +++ + F DA LEE++
Sbjct: 533 MKR-----LLG---KMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 122/311 (39%), Gaps = 69/311 (22%)
Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
C S LL YS LI + EA + ++ L Y+ALI A +N +E A
Sbjct: 163 CFSYELL-YSILIHALGRSEKLYEAFLLSQKQTLTPLT-----YNALIGACARNNDIEKA 216
Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTV-----DDVERD------------- 570
++L+ +M ++G + + V Y+ +I + RS + + ++ERD
Sbjct: 217 LNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDII 276
Query: 571 ---------------------LGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV 609
G ++A L ++ S + ++GRT + + +
Sbjct: 277 MGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISA----LADSGRT------LEAEAL 326
Query: 610 AEKAGQGKKENRCRQEILCILG------------VFQKMHKLKIKPNVVTFSAILNACSR 657
E+ Q + R R + G + +M K + P+ T+S +++A
Sbjct: 327 FEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVN 386
Query: 658 CNSFEDASMLLEELRLFDNQVYG-VAHGLLMGYRDN-IWVQALSLFDEVKLMDSSTASAF 715
+E A ++L+E+ D Q V LL G+RD W + + E+K + F
Sbjct: 387 AGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF 446
Query: 716 YNALTDMLWHF 726
YN + D F
Sbjct: 447 YNVVIDTFGKF 457
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 200 bits (509), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 195/352 (55%), Gaps = 3/352 (0%)
Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
L + G +DLA ++ + V ++ +I A +A+++F M ++PN
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
+VTYN++I C G + + DM+ + P+ +TF++L+ + G A L
Sbjct: 290 VVTYNSLIRCLCNYG--RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
++EM+ R ID DIFTY++L++ C ++D A + M +K+ PNVVTY+T+I G+ K
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
A R+++ + +F EM G+ + V+YNT++ + G + A + K+M S G+ D +T
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
Y+ LL G K GK ++ +FE ++ + P++ TY+ +I+ K G ++ +F
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
G+K +V++Y+ +I C+ GL E A +L EM ++G PN TYN++I A
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 233/489 (47%), Gaps = 27/489 (5%)
Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
++S + ++ K DL ++ E N +Y+++ LI+ + R A++V M +
Sbjct: 86 LLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLG 145
Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
+P++VT +++++ G V + D M QP+ +TFN+L+ A
Sbjct: 146 YEPDIVTLSSLLNGYCHGK-RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204
Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
L + MV RG D+FTY T+++ +CK +DLA ++ +M I +VV Y+T+ID
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
++DALN+F+EM GI + V+YN+++ GR+ +A + +M I +
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
VT++AL+ + K+GK E +++++M + P++ TYS+LI+ + EA +F
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
+VV Y+ LI CK VE + L EM++ G+ N VTYN++I ++
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444
Query: 559 TTE--------CTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA 610
+ D V D+ S LD +C + G+ + ++ VF L
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDI--ITYSILLDGLC--------KYGKLEKALV-VFEYLQK 493
Query: 611 EKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
K E +C G +F + +KPNV+ ++ +++ R E+
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 664 ASMLLEELR 672
A L E++
Sbjct: 554 ADALFREMK 562
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 209/408 (51%), Gaps = 19/408 (4%)
Query: 154 CGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA------SAMISILGR 205
C D +T+ ++ L RG+ A+ +K ++GK+ + +I L
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLL--------KKMEKGKIEADVVIYTTIIDALCN 267
Query: 206 LGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
V+ A N+F N+G V +++LI G +A + + M + PN+VT
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 266 YNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNE 324
++A+IDA K G +++D+M++ + PD T++SL+ C L EA +++F
Sbjct: 328 FSALIDAFVKEG-KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA-KHMFEL 385
Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
M+ + ++ TYNTL+ CK +++ E+ EM + + N VTY+T+I G +AG
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
D A +F +M G+ D ++Y+ +L K G+ E+AL+V + ++ S + D TYN
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
++ G K GK ++ +F + V PN++ Y+T+I + + GL +EA +FRE K+ G
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
+ Y+ LI A ++G ++ L+ EM G + T + +I+
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 205/429 (47%), Gaps = 41/429 (9%)
Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
V++F +M+++ P + FN LL+ ++ ++ +L M + I D+++YN L++
Sbjct: 65 VDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINC 124
Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
C+ +Q+ LA ++ +M P++VT S++++GY R+ +A+ + +M + +
Sbjct: 125 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
V++NT++ + EA+ + M + G + D TY ++ G K+G D + +
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 244
Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
+M+ + +++ Y+T+ID +A+ +F E G++ +VV Y++LI LC G
Sbjct: 245 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDD-VERDLGKQ--KES 577
A LL +M + I PNVVT++++IDAF G+ E D+ ++R + S
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 578 ANLDAMCSQD-------------DKDVQEAGRTDNQIIKVFG---------QLVAEKAGQ 615
+ ++ C D KD T N +IK F +L E + +
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424
Query: 616 GKKENRCRQEILCILGVFQ------------KMHKLKIKPNVVTFSAILNACSRCNSFED 663
G N L I G+FQ KM + P+++T+S +L+ + E
Sbjct: 425 GLVGNTVTYNTL-IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 664 ASMLLEELR 672
A ++ E L+
Sbjct: 484 ALVVFEYLQ 492
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 195/401 (48%), Gaps = 10/401 (2%)
Query: 137 RDDVSLG-DILKKFEFKLCGAD--DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQG 193
R D+ L +LKK E AD YT ++ L N + A+ F + R N
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
+++I L G+ A + + V FSALI A+ + G EA +++
Sbjct: 293 --YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVD-FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSR 311
M + ++ P++ TY+++I+ C +D KH+ E+ M+ P+ +T+N+L+ +
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL---MISKDCFPNVVTYNTLIKGFCK 407
Query: 312 GGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
E LF EM RG+ + TYNTL+ + + D+A +I +M + + P+++T
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
YS ++DG K G+L+ AL +F ++ + D +YN ++ K G+ E+ + +
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
G++ + + Y ++ G+ ++G +E +F +MK D PN TY+TLI + G
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 587
Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
+ ++ +E + G D S +I+ L L +S + +L
Sbjct: 588 ASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 203/467 (43%), Gaps = 96/467 (20%)
Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
RG + AA + E + R N LLD ++D A ++ EM P++V
Sbjct: 36 RGVYFSAASYDYREKLSR---------NVLLDL-----KLDDAVDLFGEMVQSRPLPSIV 81
Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
++ ++ AK + D +++ M+ L I D SYN +++ + + + AL V +M
Sbjct: 82 EFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKM 141
Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI--------- 481
G D VT ++LL GY + E + +QM PN +T++TLI
Sbjct: 142 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKA 201
Query: 482 -----------------DVYSKG----GLYKE-----AMQIFREFKQAGLKADVVLYSAL 515
D+++ G GL K A+ + ++ ++ ++ADVV+Y+ +
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261
Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA---FGR-SATTECTVDDVERDL 571
IDALC V A++L EM +GIRPNVVTYNS+I +GR S + D +ER
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-- 319
Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLV-AEKAGQGKKENRCRQEILCIL 630
K + N+ + D V+E G+LV AEK
Sbjct: 320 ---KINPNVVTFSALIDAFVKE------------GKLVEAEK------------------ 346
Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL---RLFDNQVYGVAHGLLM 687
++ +M K I P++ T+S+++N + ++A + E + F N V + L+
Sbjct: 347 -LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV--TYNTLIK 403
Query: 688 GYRDNIWV-QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQ 733
G+ V + + LF E+ + YN L L+ G AQ
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 199 bits (507), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 216/403 (53%), Gaps = 9/403 (2%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
+T L+ L + S+A+ V+R K Q L + A+I+ L + G+ DLA N+
Sbjct: 173 FTTLVHGLFQHNKASEAVA----LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
V +S +I + + + +A+++F M ++P++ TY+++I C
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
G + + DML + P+ +TFNSL+ ++ G A LF+EM+ R ID +I
Sbjct: 289 G--RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
TYN+L++ C ++D A +I M +K+ P+VVTY+T+I+G+ KA ++ D + +F +M
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
G+ + V+Y T++ + + + A +V K+M S G+ + +TYN LL G K GK
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
++ +FE ++ + P++ TY+ + + K G ++ +F G+K DV+ Y+ +
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
I CK GL E A +L +M ++G P+ TYN++I A R
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Score = 190 bits (483), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 141/544 (25%), Positives = 255/544 (46%), Gaps = 34/544 (6%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
S ++S + ++ K DL + E G + +Y ++ +I+ R A+++ M +
Sbjct: 69 SKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMK 128
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
P++VT N++++ G V + D M+ G QPD +TF +L+ +
Sbjct: 129 LGYGPSIVTLNSLLNGFCHGN-RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
A L MV +G D+ TY +++ +CK + DLA ++ +M I +VV YST+I
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
D K +DDALN+F+EM GI D +Y++++S GR+ +A + +M I
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
+ VT+N+L+ + K+GK E ++F++M + PN++TY++LI+ + EA QI
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
F DVV Y+ LI+ CK V + L +M++ G+ N VTY ++I F +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 557 SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQG 616
+ ++C D + + KQ S + + I + L+ G
Sbjct: 428 A--SDC---DNAQMVFKQMVSDGV------------------HPNIMTYNTLLDGLCKNG 464
Query: 617 KKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 676
K E + VF+ + K K++P++ T++ + + ED L L L
Sbjct: 465 KLEKA--------MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Query: 677 QVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
+ +A+ ++ G+ + + +A +LF ++K S YN L G K +
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 576
Query: 735 VVLE 738
++ E
Sbjct: 577 LIKE 580
Score = 153 bits (386), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 203/407 (49%), Gaps = 34/407 (8%)
Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
V++F +M+++ P + F+ LL+ ++ ++ + +M G+ +++TYN +++
Sbjct: 50 VDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINC 109
Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
+C+ +Q+ A I+ +M P++VT +++++G+ R+ +A+ + +M +G D
Sbjct: 110 LCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 169
Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
V++ T++ + + EA+ + + M G + D VTY A++ G K+G+ D +
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
+M+ + +++ YST+ID K +A+ +F E G++ DV YS+LI LC G
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDD-VERDLGKQKESAN 579
A LL +M + I PNVVT+NS+IDAF G+ E D+ ++R + + N
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 580 --LDAMCSQD-------------DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQ 624
++ C D KD T N +I F + A+K G
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK--AKKVVDG-------- 399
Query: 625 EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
+ +F+ M + + N VT++ +++ + + ++A M+ +++
Sbjct: 400 -----MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 198/446 (44%), Gaps = 35/446 (7%)
Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
EA+ +F M + P++V ++ ++ A K F V+ + M GV + T+N +
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK-KFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
+ R A + +M+ G I T N+LL+ C G ++ A ++ +M
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
P+ VT++T++ G + + +A+ + M G D V+Y V++ K G + AL
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
+ +ME I D V Y+ ++ K D+ +F +M + P++ TYS+LI
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
G + +A ++ + + + +VV +++LIDA K G + A L DEM + I PN+V
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 546 TYNSIIDAFGRS-------------ATTECTVDDVERDL---GKQKESANLDAMCSQDDK 589
TYNS+I+ F + +C D V + G K +D M + +
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM--ELFR 404
Query: 590 DVQEAGRTDNQIIK---VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
D+ G N + + G A + VF++M + PN++
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM-------------VFKQMVSDGVHPNIM 451
Query: 647 TFSAILNACSRCNSFEDASMLLEELR 672
T++ +L+ + E A ++ E L+
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 169/356 (47%), Gaps = 37/356 (10%)
Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
+ A +LF EMV I ++ LL AI K + DL +M +S N+ TY+ M
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
I+ + +L AL + +M LG G V+ N++L+ + R EA+ + +M G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
+ D VT+ L+ G + K E + E+M P+L+TY +I+ K G A+
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA-- 553
+ + ++ ++ADVV+YS +ID+LCK V+ A++L EM +GIRP+V TY+S+I
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 554 -FGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
+GR + D R L E R N + F L+
Sbjct: 287 NYGRWS-------DASRLLSDMLE-------------------RKINPNVVTFNSLIDAF 320
Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
A +GK ++ +F +M + I PN+VT+++++N + ++A +
Sbjct: 321 AKEGK--------LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 195/358 (54%), Gaps = 4/358 (1%)
Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
+I+ L R + +A ++ + GY V S+LI+ + + +AI + + M+
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
+P++V YN +ID K G+ VE+FD M R+GV+ D +T+NSL+A G W A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGL-VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
L +MV R I ++ T+ ++D K + A ++ EM + + P+V TY+++I+G
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
GR+D+A M M G D V+YNT+++ + K R +E + +EM G+ D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
+TYN ++ GY + G+ D + +F +M + PN+ TYS L+ ++A+ +F
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFE 405
Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
+++ ++ D+ Y+ +I +CK G VE A L ++ +G++P+VV+Y ++I F R
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 173/287 (60%)
Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
+ ++ + +++F M+++ P + F+ +L+ ++ ++ +LF+ M GI D+
Sbjct: 45 RSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDL 104
Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
++YN +++ +C+ ++ +A ++ +M P+VVT S++I+G+ + R+ DA+++ S+
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
M+ +G D V YNT++ K+G +A+ + ME G+R DAVTYN+L+ G G+
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
+ + R+ M + PN++T++ +IDV+ K G + EAM+++ E + + DV Y++
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
LI+ LC +G V+ A +LD M +G P+VVTYN++I+ F +S +
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 187/365 (51%), Gaps = 4/365 (1%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
S ++S + + DL ++F G G+ +Y+++ +I+ R A+SV M +
Sbjct: 73 SKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMK 132
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
+ +P++VT +++I+ +G F +++ M G +PD + +N+++ + GL
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVF-DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
A LF+ M G+ D TYN+L+ +C + A +M +M ++I PNV+T++ +I
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
D + K G+ +A+ ++ EM + D +YN++++ GR +EA + M + G
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
D VTYN L+ G+ K + DE ++F +M + + +TY+T+I Y + G A +I
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
F + ++ YS L+ LC N VE A+ L + M K I ++ TYN +I +
Sbjct: 372 FSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 557 SATTE 561
E
Sbjct: 429 IGNVE 433
Score = 162 bits (411), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 170/310 (54%), Gaps = 1/310 (0%)
Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
+E I +F M + P++V ++ V+ K ++ V+ +F M G+ D ++N
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSK-NYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
++ R + A ++ +M+ G + D+ T ++L++ C+G ++ A +++++M
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
P+VV Y+T+IDG K G ++DA+ +F M+ G+ D V+YN++++ GR+ +A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
+ ++M I + +T+ A++ + K+GK+ E +++E+M CV P++ TY++LI+
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
G EA Q+ G DVV Y+ LI+ CK+ V+ L EM + G+ +
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 545 VTYNSIIDAF 554
+TYN+II +
Sbjct: 350 ITYNTIIQGY 359
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 132/246 (53%), Gaps = 6/246 (2%)
Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
V F+A+I + + G EA+ ++ M R + P++ TYN++I+ C G VD ++
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD--EAKQM 301
Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
D M+ G PD +T+N+L+ + + LF EM RG+ D TYNT++ +
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
+ D A EI + M ++ PN+ TYS ++ G R++ AL +F M+ I LD +
Sbjct: 362 AGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITT 418
Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
YN V+ K+G E+A + + + G++ D V+Y ++ G+ ++ ++D+ ++ +M+
Sbjct: 419 YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478
Query: 467 ADCVSP 472
D + P
Sbjct: 479 EDGLLP 484
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 126/285 (44%), Gaps = 37/285 (12%)
Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
EE L CK ++S + V ++ +L K YD V +F M+ + +L +Y+ +
Sbjct: 52 EEIDLFCKMIQSRPL-PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
I+ + + A+ + + + G + DVV S+LI+ C+ V A+ L+ +M + G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 541 RPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQ 600
RP+VV YN+IID + V+ +R +++ DA+
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDR---MERDGVRADAV----------------- 210
Query: 601 IIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
+ LVA G+ + R + + M I PNV+TF+A+++ +
Sbjct: 211 ---TYNSLVAGLCCSGRWSDAAR--------LMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Query: 661 FEDASMLLEEL--RLFDNQVY---GVAHGLLMGYRDNIWVQALSL 700
F +A L EE+ R D V+ + +GL M R + Q L L
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
>sp|Q8GYP6|PPR49_ARATH Pentatricopeptide repeat-containing protein At1g18900
OS=Arabidopsis thaliana GN=At1g18900 PE=1 SV=1
Length = 860
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 255/543 (46%), Gaps = 54/543 (9%)
Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
G D TY T++ + + Q +++ EM PN VTY+ +I Y +A L++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
+N+F++M+ G DRV+Y T++ I+AK G + A+ + + M++ G+ D TY+ ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
GK G ++F +M +PNL+TY+ ++D+++K Y+ A++++R+ + AG + D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
V YS +++ L G +E A ++ EM ++ P+ Y ++D +G++ E
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE------- 591
Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
Q A L A ++ T N ++ F L K + +
Sbjct: 592 --KAWQWYQAMLHA-------GLRPNVPTCNSLLSTF--LRVNKIAEAYE---------- 630
Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG 688
+ Q M L ++P++ T++ +L+ C+ S D + + + AH L+
Sbjct: 631 ---LLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHP----AHMFLLK 683
Query: 689 YR------DNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR 742
+N+ A + D + D + +A+ D L GQK A V ++
Sbjct: 684 MPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQK 743
Query: 743 QVWENVWSE-SC----LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGK 797
V+ + E SC ++LH+MS G A + L + P + I+TGWG+
Sbjct: 744 NVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGR 803
Query: 798 HSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDD 857
S+V G +R+AVE LL G+PF+ + N G F+ +G + WL +S H +
Sbjct: 804 RSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVGSGEPLNRWLLQS--------HVE 855
Query: 858 RTH 860
R H
Sbjct: 856 RMH 858
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 166/327 (50%), Gaps = 10/327 (3%)
Query: 247 AISVFNSMKRY-NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
A+ F +KR K + TY ++ G+ F + ++ D+M+R+G QP+ +T+N L
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK-QFGAINKLLDEMVRDGCQPNTVTYNRL 405
Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
+ R A N+FN+M G D TY TL+D K +D+A ++ M A +
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
SP+ TYS +I+ KAG L A +F EM G + V+YN ++ ++AK ++ AL
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
+ ++M+++G D VTY+ ++ G G +E +F +M+ P+ Y L+D++
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
K G ++A Q ++ AGL+ +V ++L+ + + A LL M G+RP++
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 645
Query: 546 TYNSIIDAFGRSATTECTVDDVERDLG 572
TY ++ CT + D+G
Sbjct: 646 TYTLLLSC--------CTDGRSKLDMG 664
Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 150/309 (48%), Gaps = 1/309 (0%)
Query: 179 FAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAY 238
F + +KR+ G + M+ LGR + + + + +G ++ LI +Y
Sbjct: 350 FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSY 409
Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
GR+ Y EA++VFN M+ KP+ VTY +ID K G ++++ M G+ PD
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF-LDIAMDMYQRMQAGGLSPD 468
Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
T++ ++ + G AA LF EMV +G ++ TYN ++D K A ++
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
+M P+ VTYS +++ G L++A +F+EM+ D Y ++ ++ K G
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
E+A + M +G+R + T N+LL + + K E + + M A + P+L TY+
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 479 TLIDVYSKG 487
L+ + G
Sbjct: 649 LLLSCCTDG 657
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 129/317 (40%), Gaps = 38/317 (11%)
Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
S + V ++ + L RF + +++ G+R DA N +L + Y F +
Sbjct: 298 SGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWL 354
Query: 466 KADCVSPNLL----TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCK 521
K P TY+T++ + + ++ E + G + + V Y+ LI + +
Sbjct: 355 KRQ---PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGR 411
Query: 522 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLD 581
+ A+++ ++M + G +P+ VTY ++ID ++ D+ D+ ++ ++ L
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL-----DIAMDMYQRMQAGGLS 466
Query: 582 AMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC-----------IL 630
+ G+ + + +L E QG N I+ L
Sbjct: 467 PDTFTYSVIINCLGKAGH--LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLL 686
+++ M +P+ VT+S ++ C E+A + E++ + D VYG+ L
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD-L 583
Query: 687 MGYRDNI-----WVQAL 698
G N+ W QA+
Sbjct: 584 WGKAGNVEKAWQWYQAM 600
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 198/406 (48%), Gaps = 41/406 (10%)
Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
+ +I RLGK A I E G V ++ +IS Y ++G A+SV +
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD--- 196
Query: 256 RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGL 314
R ++ P++VTYN ++ + G K +E+ D ML+ PD IT+ L+ A C G+
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSG-KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255
Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
A + L +EM RG D+ TYN L++ ICK ++D A + + +MP+ PNV+T++
Sbjct: 256 GHAMK-LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 375 MIDGYAKAGRLDDALNMFSEM----------------------KFLGIGLD--------- 403
++ GR DA + ++M LG +D
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 404 ----RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
+SYN +L + K + + A+ + M S G D VTYN +L K GK ++
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
+ Q+ + SP L+TY+T+ID +K G +A+++ E + LK D + YS+L+ L
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
+ G V+ A+ E + GIRPN VT+NSI+ +S T+ +D
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540
Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 184/349 (52%), Gaps = 3/349 (0%)
Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
GK+ A + + L V ++ LI A R A+ + + M+ P++VTY
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEM 325
N +++ C +G +D ++ +DM +G QP+ IT N +L G W A L +M
Sbjct: 278 NVLVNGICKEGRLD--EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
+ +G + T+N L++ +C+ + A +I+ +MP PN ++Y+ ++ G+ K ++
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 386 DDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNAL 445
D A+ M G D V+YNT+L+ K G+ E+A+ + ++ S G +TYN +
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455
Query: 446 LGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
+ G K GK + ++ ++M+A + P+ +TYS+L+ S+ G EA++ F EF++ G+
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
+ + V +++++ LCK+ + A+ L M G +PN +Y +I+
Sbjct: 516 RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 218/449 (48%), Gaps = 37/449 (8%)
Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
R G+++ E + G + + LI + R G ++A + ++ P+++
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFN 323
TYN +I K G + + + + D M V PD +T+N++L ++C G L +A + +
Sbjct: 174 TYNVMISGYCKAG-EINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME-VLD 228
Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
M+ R D+ TY L++A C+ + + A +++ EM + +P+VVTY+ +++G K G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
RLD+A+ ++M G + +++N +L GR+ +A + +M G VT+N
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
L+ ++G + E+M PN L+Y+ L+ + K A++
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECT 563
G D+V Y+ ++ ALCK+G VE AV +L++++ +G P ++TYN++ID ++ T
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT--- 465
Query: 564 VDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCR 623
K LD M ++D K + I + LV + +GK +
Sbjct: 466 ----------GKAIKLLDEMRAKDLKP--------DTI--TYSSLVGGLSREGKVDE--- 502
Query: 624 QEILCILGVFQKMHKLKIKPNVVTFSAIL 652
+ F + ++ I+PN VTF++I+
Sbjct: 503 -----AIKFFHEFERMGIRPNAVTFNSIM 526
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 179/383 (46%), Gaps = 40/383 (10%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
Y +LR L + G+ +A++ ++R+ + + +I R V A + +
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI--TYTILIEATCRDSGVGHAMKLLDE 264
Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
+ G V ++ L++ + G EAI N M +PN++T+N ++ + C G
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG- 323
Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
+ ++ DMLR G P +TFN L+ R GL A ++ +M G + +Y
Sbjct: 324 -RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
N LL CK +MD A E + M ++ P++VTY+TM+ K G+++DA+ + +++
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
G ++YNTV+ AK G+ +A+ + EM + ++ D +TY++L+GG ++GK DE
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 458 VRRMFEQMKADCVSPNLLT-----------------------------------YSTLID 482
+ F + + + PN +T Y+ LI+
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562
Query: 483 VYSKGGLYKEAMQIFREFKQAGL 505
+ G+ KEA+++ E GL
Sbjct: 563 GLAYEGMAKEALELLNELCNKGL 585
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 186/401 (46%), Gaps = 27/401 (6%)
Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
+ ++M+ +G PD I +L+ R G A + + G D+ TYN ++
Sbjct: 123 KFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGY 182
Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
CK +++ A ++ M ++SP+VVTY+T++ +G+L A+ + M D
Sbjct: 183 CKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
++Y ++ + A+ + EM G D VTYN L+ G K+G+ DE +
Sbjct: 240 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299
Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
M + PN++T++ ++ G + +A ++ + + G VV ++ LI+ LC+ GL
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359
Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ------KESA 578
+ A+ +L++M + G +PN ++YN ++ F + + ++ +ER + + +
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 579 NLDAMCSQDDKDVQEAGRTDNQ--------IIKVFGQLVAEKAGQGKKENRCRQEILCIL 630
L A+C D V++A NQ ++ + ++ A GK +
Sbjct: 420 MLTALCK--DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK--------AI 469
Query: 631 GVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
+ +M +KP+ +T+S+++ SR ++A E
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510
Score = 93.2 bits (230), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 38/264 (14%)
Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
A+ + L +G+ +V F+ LI+ R G AI + M ++ +PN ++YN ++
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 272 A-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGI 330
C + +D +E + M+ G PD +T+N++L + G E A + N++ +G
Sbjct: 388 GFCKEKKMD--RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 331 DQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN-------------------------- 364
+ TYNT++D + K + A +++ EM AK+
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 365 ---------ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYA 415
I PN VT+++++ G K+ + D A++ M G + SY ++ A
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565
Query: 416 KLGRFEEALLVCKEMESSGIRKDA 439
G +EAL + E+ + G+ K +
Sbjct: 566 YEGMAKEALELLNELCNKGLMKKS 589
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 189/373 (50%), Gaps = 1/373 (0%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
S MI+ R K+ LA + + GY FS LI+ G EA+ + + M
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
KP+L+T N +++ G + + ++ + D M+ G QP+ +T+ +L V + G
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAML-LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
A L +M R I D Y+ ++D +CK +D AF + EM K I+ N++TY+ +I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
G+ AGR DD + +M I + V+++ ++ + K G+ EA + KEM GI
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
D +TY +L+ G+ K+ D+ +M + M + PN+ T++ LI+ Y K + +++
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
FR+ G+ AD V Y+ LI C+ G + A L EM + PN+VTY ++D
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 557 SATTECTVDDVER 569
+ +E ++ E+
Sbjct: 486 NGESEKALEIFEK 498
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 184/373 (49%), Gaps = 4/373 (1%)
Query: 184 KREER--KNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
K EER K D K S +I L + G +D A N+F +G + ++ LI + +
Sbjct: 253 KMEERNIKLDAVKY-SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
G + + M + + PN+VT++ +ID+ K G + E+ +M+ G+ PD IT
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEG-KLREAEELHKEMIHRGIAPDTIT 370
Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
+ SL+ + + A + + MV +G D +I T+N L++ CK ++D E+ +M
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
+ + + VTY+T+I G+ + G+L+ A +F EM + + V+Y +L G E
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490
Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
+AL + +++E S + D YN ++ G K D+ +F + V P + TY+ +I
Sbjct: 491 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
K G EA +FR+ ++ G D Y+ LI A +G +V L++E+ + G
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 610
Query: 542 PNVVTYNSIIDAF 554
+ T +ID
Sbjct: 611 VDASTIKMVIDML 623
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 227/521 (43%), Gaps = 79/521 (15%)
Query: 276 GGVDFK--HVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
G VD K +++F DM+ + P I F+ L + ++ ++ L +M +GI +
Sbjct: 63 GLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHN 122
Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
++T + +++ C+ ++ LAF M ++ PN +T+ST+I+G GR+ +AL +
Sbjct: 123 LYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVD 182
Query: 394 EMKFLGIGLDRVSYNT-----------------------------------VLSIYAKLG 418
M +G D ++ NT VL++ K G
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
+ A+ + ++ME I+ DAV Y+ ++ G K G D +F +M+ ++ N++TY+
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 302
Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
LI + G + + ++ R+ + + +VV +S LID+ K G + A L EM
Sbjct: 303 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 362
Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD-DKDVQ----- 592
GI P+ +TY S+ID F + E L K + +D M S+ D +++
Sbjct: 363 GIAPDTITYTSLIDGFCK-----------ENHLDKANQM--VDLMVSKGCDPNIRTFNIL 409
Query: 593 -----EAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLK 640
+A R D+ +++F ++ + C LG +FQ+M K
Sbjct: 410 INGYCKANRIDDG-LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELRL----FDNQVYG-VAHGLLMGYR-DNIW 694
+ PN+VT+ +L+ E A + E++ D +Y + HG+ + D+ W
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Query: 695 VQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLV 735
LF + L YN + L G A+L+
Sbjct: 529 ----DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+ +I LGK+++AK +F+ ++ + + L+ +G ++A+ +F +++
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGL 314
++ ++ YN +I C VD ++F + GV+P T+N ++ +C +G L
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVD--DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
EA LF +M G D +TYN L+ A + +++ E+ S + T
Sbjct: 560 SEAEL-LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 618
Query: 375 MIDGYAKAGRLDDA-LNMFS 393
+ID + GRL + L+M S
Sbjct: 619 VIDMLSD-GRLKKSFLDMLS 637
>sp|Q5G1S8|PP241_ARATH Pentatricopeptide repeat-containing protein At3g18110,
chloroplastic OS=Arabidopsis thaliana GN=EMB1270 PE=2
SV=2
Length = 1440
Score = 197 bits (500), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 217/420 (51%), Gaps = 8/420 (1%)
Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
DY F+++ +G W +A++ F + R + ++ +A++ +LGR + LA IF
Sbjct: 158 DYCFVVKSVGQES-WQRALEVFEWLNLRHWH-SPNARMVAAILGVLGRWNQESLAVEIFT 215
Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK-G 276
A G+ V ++A++ Y RSG +A + ++M++ P+L+++N +I+A K G
Sbjct: 216 RA-EPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSG 274
Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
G+ VE+ D + +G++PD IT+N+LL+ CSR + A +F +M D++T
Sbjct: 275 GLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWT 334
Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
YN ++ + A + E+ K P+ VTY++++ +A+ + ++ +M+
Sbjct: 335 YNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES-SGIRKDAVTYNALLGGYGKQGKY 455
+G G D ++YNT++ +Y K G+ + AL + K+M+ SG DA+TY L+ GK +
Sbjct: 395 KMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRT 454
Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
E + +M + P L TYS LI Y+K G +EA F ++G K D + YS +
Sbjct: 455 VEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVM 514
Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVERDLG 572
+D L + A L +M +G P+ Y +I RS + T+ D+E G
Sbjct: 515 LDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCG 574
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 159/684 (23%), Positives = 304/684 (44%), Gaps = 54/684 (7%)
Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYA-FSALISAYGRSGYCQEAISVFNS 253
+ +M+ + +LG + A + A +G+ ++ +I AYG+ Q+A SV +
Sbjct: 718 VCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGN 777
Query: 254 MKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
+++ P+L T+N+++ A + G ++ IF+ M+R+G P + N LL A+C G
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAQCGC-YERARAIFNTMMRDGPSPTVESINILLHALCVDG 836
Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
L E + E+ G + +LDA + + +I + M A P + Y
Sbjct: 837 RL-EELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLY 895
Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
MI+ K R+ DA M SEM+ ++ +N++L +Y + +++ + V + ++
Sbjct: 896 RMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKE 955
Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
+G+ D TYN L+ Y + + +E + +QM+ + P L TY +LI + K ++
Sbjct: 956 TGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQ 1015
Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
A Q+F E GLK D Y ++ +G A LL M GI P + T + ++
Sbjct: 1016 AEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMV 1075
Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
++ S + + E+ L K D +V+ + +I +
Sbjct: 1076 SYSSSGNPQ----EAEKVLSNLK------------DTEVELTTLPYSSVIDAY------- 1112
Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
+ K N + +L +M K ++P+ ++ + A S + +LL+ L
Sbjct: 1113 -LRSKDYNSGIERLL-------EMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKAL- 1163
Query: 673 LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGA 732
++ + + LL G + + + F+++K ++ + A F NAL ++LW F + A
Sbjct: 1164 --EDIGFDLPIRLLAGRPELLVSEVDGWFEKLKSIEDNAALNFVNALLNLLWAFELRATA 1221
Query: 733 QLVVLEGKRR--------QVWENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGH- 783
V G +R +V + W D +S GAA + WL ++ EG+
Sbjct: 1222 SWVFQLGIKRGIFSLDVFRVADKDWGA---DFRRLSGGAALVALTLWLDHMQDASLEGYP 1278
Query: 784 ELPKLLSILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWL 843
E PK + ++TG +++ + +L + ++ L MG+PF G ++ + WL
Sbjct: 1279 ESPKSVVLITGTAEYNGI----SLDKTLKACLWEMGSPFLPCKTRTGLLVAKAHSLRMWL 1334
Query: 844 RESGTLKVLVLHDDRTHSENAGFD 867
++S L L D + E+ D
Sbjct: 1335 KDSPFCFDLELKDSVSLPESNSMD 1358
Score = 116 bits (290), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 171/370 (46%), Gaps = 36/370 (9%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+ ++S R +D A +FE ++ ++A+IS YGR G EA +F ++
Sbjct: 301 NTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELEL 360
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
P+ VTYN+++ A + + + V E++ M + G D +T+N+++ + + G +
Sbjct: 361 KGFFPDAVTYNSLLYAFARER-NTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLD 419
Query: 317 AARNLFNEMVH-RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
A L+ +M G + D TY L+D++ K + A +M+EM I P + TYS +
Sbjct: 420 LALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSAL 479
Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
I GYAKAG+ ++A + FS M G D ++Y+ +L + + +A + ++M S G
Sbjct: 480 ICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGH 539
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC------VSPNLL-------------- 475
Y ++ G K+ + D++++ M+ C +S L+
Sbjct: 540 TPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKV 599
Query: 476 -----------TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
T +++ YS G + EA ++ K+ + ++ ALI CK
Sbjct: 600 AITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCK--- 656
Query: 525 VESAVSLLDE 534
V + + LDE
Sbjct: 657 VNNLSAALDE 666
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 123/587 (20%), Positives = 251/587 (42%), Gaps = 85/587 (14%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
++++ R + K +++ G+G ++ +I YG+ G A+ ++ MK
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430
Query: 257 YNLK-PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
+ + P+ +TY +ID+ GK + + +ML G++P T+++L+ ++ G
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRTVE-AAALMSEMLDVGIKPTLQTYSALICGYAKAGKR 489
Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
E A + F+ M+ G D Y+ +LD + +G + A+ + +M + +P+ Y M
Sbjct: 490 EEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELM 549
Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
I G K R DD +M+ L G++ + ++VL K F+ A K ++G
Sbjct: 550 ILGLMKENRSDDIQKTIRDMEEL-CGMNPLEISSVL---VKGECFDLAARQLKVAITNGY 605
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD----------------CVSPNL----- 474
+ T ++LG Y G++ E + E +K C NL
Sbjct: 606 ELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALD 665
Query: 475 ----------------LTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
Y TL+ Y EA Q+F + + +G +A + +++
Sbjct: 666 EYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVV 725
Query: 519 LCKNGLVESAVSLLDEMTKEGIR-PNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
CK G E+A ++++ +G Y II+A+G+ + L ++ ES
Sbjct: 726 YCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGK------------QKLWQKAES 773
Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
+++++GRT + +K + L++ A G E R R +F M
Sbjct: 774 VV---------GNLRQSGRTPD--LKTWNSLMSAYAQCGCYE-RAR-------AIFNTMM 814
Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRDNIWVQA 697
+ P V + + +L+A E+ +++EEL+ ++ + L++ + + +A
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLML----DAFARA 870
Query: 698 LSLFDEVKLMDSSTASAF------YNALTDMLWHFGQKRGAQLVVLE 738
++F+ K+ S A+ + Y + ++L + R A+++V E
Sbjct: 871 GNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSE 917
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 197 bits (500), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 212/407 (52%), Gaps = 11/407 (2%)
Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILG--RLGKVDLA 212
D +TF L+ L S+A+ V R K Q L + I + G + G +DLA
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVA----LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
++ + V ++ +I A +A+++F M ++PN+VTYN++I
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 273 -CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
C G + + DM+ + P+ +TF++L+ + G A L++EM+ R ID
Sbjct: 301 LCNYG--RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
DIFTY++L++ C ++D A + M +K+ PNVVTY+T+I G+ KA R+D+ + +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
F EM G+ + V+Y T++ + + + A +V K+M S G+ D +TY+ LL G
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
GK + +FE ++ + P++ TY+ +I+ K G ++ +F G+K +VV
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538
Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
Y+ ++ C+ GL E A +L EM +EG P+ TYN++I A R
Sbjct: 539 YTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 193 bits (491), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 189/333 (56%), Gaps = 3/333 (0%)
Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFD 288
+ +++ + G A+S+ M++ ++P +V YN +IDA C V+ + +F
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN--DALNLFT 280
Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
+M G++P+ +T+NSL+ G W A L ++M+ R I+ ++ T++ L+DA K
Sbjct: 281 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 340
Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
++ A ++ EM ++I P++ TYS++I+G+ RLD+A +MF M + V+YN
Sbjct: 341 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
T++ + K R +E + + +EM G+ + VTY L+ G+ + + D + +F+QM +D
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
V P+++TYS L+D G + A+ +F +++ ++ D+ Y+ +I+ +CK G VE
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
L ++ +G++PNVVTY +++ F R E
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Score = 183 bits (465), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 130/512 (25%), Positives = 231/512 (45%), Gaps = 69/512 (13%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
S ++S + ++ K DL ++ E N G + +Y +S LI+ + R A++V M +
Sbjct: 85 SKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMK 144
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL---------- 306
+P++VT N++++ G V + M+ G QPD TFN+L+
Sbjct: 145 LGYEPDIVTLNSLLNGFCHGN-RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 307 --------------------------AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
+C RG + + A +L +M I+ + YNT+
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI-DLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
+DA+C ++ A + EM K I PNVVTY+++I GR DA + S+M I
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
+ V+++ ++ + K G+ EA + EM I D TY++L+ G+ + DE +
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
MFE M + PN++TY+TLI + K E M++FRE Q GL + V Y+ LI
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442
Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL 580
+ ++A + +M +G+ P+++TY+ ++D + E + E L + K +
Sbjct: 443 QARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY-LQRSKMEPD- 500
Query: 581 DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK 640
I + ++ GK E+ ++ C L +
Sbjct: 501 ---------------------IYTYNIMIEGMCKAGKVED--GWDLFCSLSL------KG 531
Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
+KPNVVT++ +++ R E+A L E++
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 143/541 (26%), Positives = 256/541 (47%), Gaps = 15/541 (2%)
Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
K+D A N+F + ++ FS L+SA + IS+ M+ + NL TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 268 AVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
+I+ C + + + + M++ G +PD +T NSLL G A +L +MV
Sbjct: 121 ILINCFCRRSQLSL--ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
G D FT+NTL+ + + + A ++ M K P++VTY +++G K G +D
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
AL++ +M+ I V YNT++ +AL + EM++ GIR + VTYN+L+
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
G++ + R+ M ++PN++T+S LID + K G EA +++ E + +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
D+ YS+LI+ C + ++ A + + M + PNVVTYN++I F ++ + + +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM-E 417
Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
+ R++ ++ N + Q A DN I VF Q+V++ +
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQ-ARECDNAQI-VFKQMVSDGVLPDIMTYSILLDG 475
Query: 627 LC-------ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVY 679
LC L VF+ + + K++P++ T++ ++ + ED L L L +
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 680 GVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVL 737
V + +M G+ R + +A +LF E+K S YN L G K + ++
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIR 595
Query: 738 E 738
E
Sbjct: 596 E 596
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 198/379 (52%), Gaps = 7/379 (1%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGK-LASAMISILGRLGKVDLAKNIFE 217
Y ++ L RG+ A+ K E+ K + G + + +I L V+ A N+F
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLK---KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280
Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
N+G V +++LI G +A + + M + PN+VT++A+IDA K G
Sbjct: 281 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 340
Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
+++D+M++ + PD T++SL+ C L EA +++F M+ + ++ T
Sbjct: 341 -KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA-KHMFELMISKDCFPNVVT 398
Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
YNTL+ CK ++D E+ EM + + N VTY+T+I G+ +A D+A +F +M
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
G+ D ++Y+ +L G+ E AL+V + ++ S + D TYN ++ G K GK +
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
+ +F + V PN++TY+T++ + + GL +EA +FRE K+ G D Y+ LI
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 517 DALCKNGLVESAVSLLDEM 535
A ++G ++ L+ EM
Sbjct: 579 RAHLRDGDKAASAELIREM 597
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 197 bits (500), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 204/379 (53%), Gaps = 5/379 (1%)
Query: 183 VKREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
V R ++ Q L + +++ L + G DLA N+ V F+ +I + +
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDR 299
+ +A+++F M+ ++PN+VTY+++I C G + ++ DM+ + P+
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG--RWSDASQLLSDMIEKKINPNL 330
Query: 300 ITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAE 359
+TFN+L+ + G + A L+++M+ R ID DIFTYN+L++ C ++D A ++
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 360 MPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGR 419
M +K+ P+VVTY+T+I G+ K+ R++D +F EM G+ D V+Y T++ G
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
+ A V K+M S G+ D +TY+ LL G GK ++ +F+ M+ + ++ Y+T
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
+I+ K G + +F G+K +VV Y+ +I LC L++ A +LL +M ++G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 540 IRPNVVTYNSIIDAFGRSA 558
PN TYN++I A R
Sbjct: 571 PLPNSGTYNTLIRAHLRDG 589
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 194/346 (56%), Gaps = 7/346 (2%)
Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
A + + + G + + +++ + G A+++ N M+ ++ ++V +N +ID
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 272 ACGKGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
+ K ++HV + +F +M G++P+ +T++SL++ G W A L ++M+ +
Sbjct: 269 SLCK----YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
I+ ++ T+N L+DA K + A ++ +M ++I P++ TY+++++G+ RLD A
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
MF M D V+YNT++ + K R E+ + +EM G+ D VTY L+ G
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
G D +++F+QM +D V P+++TYS L+D G ++A+++F +++ +K D
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
+ +Y+ +I+ +CK G V+ L ++ +G++PNVVTYN++I
Sbjct: 505 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/480 (25%), Positives = 234/480 (48%), Gaps = 44/480 (9%)
Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
+I+ R ++ LA + + GY ++ S+L++ Y +A+++ + M
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 259 LKPNLVTYNAVIDACGKGGVDFKH-----VVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
+P+ +T+ +I F H V + D M++ G QP+ +T+ ++ +C RG
Sbjct: 186 YRPDTITFTTLIHGL------FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
+ A NL N+M I+ D+ +NT++D++CK +D A + EM K I PNVVTY
Sbjct: 240 D-TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
S++I GR DA + S+M I + V++N ++ + K G+F EA + +M
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
I D TYN+L+ G+ + D+ ++MFE M + P+++TY+TLI + K ++
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
++FRE GL D V Y+ LI L +G ++A + +M +G+ P+++TY+ ++D
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
+ E ++ + QK LD I ++ ++
Sbjct: 479 GLCNNGKLEKALEVFDY---MQKSEIKLD--------------------IYIYTTMIEGM 515
Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
GK ++ ++ C L + +KPNVVT++ +++ ++A LL++++
Sbjct: 516 CKAGKVDD--GWDLFCSLSL------KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Score = 163 bits (412), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 174/339 (51%), Gaps = 1/339 (0%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+ +I L + VD A N+F+ +G V +S+LIS G +A + + M
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
+ PNLVT+NA+IDA K G F +++DDM++ + PD T+NSL+ +
Sbjct: 324 KKINPNLVTFNALIDAFVKEG-KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
A+ +F MV + D+ TYNTL+ CK +++ E+ EM + + + VTY+T+I
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
G G D+A +F +M G+ D ++Y+ +L G+ E+AL V M+ S I+
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
D Y ++ G K GK D+ +F + V PN++TY+T+I L +EA +
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
++ K+ G + Y+ LI A ++G ++ L+ EM
Sbjct: 563 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 188/394 (47%), Gaps = 43/394 (10%)
Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
+ +F M+++ P + FN LL+ ++ ++ +L +M I ++TYN L++
Sbjct: 70 IGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINC 129
Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
C+ +Q+ LA ++ +M P++VT S++++GY R+ DA+ + +M +G D
Sbjct: 130 FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 189
Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
+++ T++ + EA+ + M G + + VTY ++ G K+G D +
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLN 249
Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
+M+A + +++ ++T+ID K +A+ +F+E + G++ +VV YS+LI LC G
Sbjct: 250 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 309
Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDD-VERDLGKQKESAN 579
A LL +M ++ I PN+VT+N++IDAF G+ E DD ++R + + N
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 580 --LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
++ C D D KA Q +F+ M
Sbjct: 370 SLVNGFCMHDRLD---------------------KAKQ----------------MFEFMV 392
Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
P+VVT++ ++ + ED + L E+
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 155/309 (50%), Gaps = 1/309 (0%)
Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
+AI +F M + P++V +N ++ A K F V+ + + M R + T+N L
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMK-KFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
+ R A L +M+ G + I T ++LL+ C G ++ A ++ +M
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
P+ +T++T+I G + +A+ + M G + V+Y V++ K G + AL
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
+ +ME++ I D V +N ++ K D+ +F++M+ + PN++TYS+LI
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
G + +A Q+ + + + ++V ++ALIDA K G A L D+M K I P++
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
Query: 546 TYNSIIDAF 554
TYNS+++ F
Sbjct: 367 TYNSLVNGF 375
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 146/323 (45%), Gaps = 31/323 (9%)
Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
++D A + M P++V ++ ++ AK + D +++ +M+ L I +YN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
+++ + + + AL + +M G VT ++LL GY + + + +QM
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
P+ +T++TLI EA+ + Q G + ++V Y +++ LCK G + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
++LL++M I +VV +N+IID+ C V+ L KE
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSL-------CKYRHVDDALNLFKE------------ 285
Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
++ G N + + L++ G+ + + + M + KI PN+VTF
Sbjct: 286 --METKGIRPNVV--TYSSLISCLCSYGRWSDASQ--------LLSDMIEKKINPNLVTF 333
Query: 649 SAILNACSRCNSFEDASMLLEEL 671
+A+++A + F +A L +++
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDM 356
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
Y+ LL L N G+ KA++ F + K E + + + + MI + + GKVD ++F +
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY--IYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
+G V ++ +IS QEA ++ MK PN TYN +I A
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
>sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720
OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1
Length = 822
Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/532 (26%), Positives = 257/532 (48%), Gaps = 48/532 (9%)
Query: 183 VKREERKNDQGKLASAMISILGRLGKVDLAKNIFE-TALNEGYGNTVYAFSALISAYGRS 241
V R RKN +I L R G ++L N+F+ + + Y ++ +I + R
Sbjct: 102 VGRFARKN-----FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARH 156
Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
+ +A +F M++++ KP+ TY+A+I+A G+ G ++ + + DDMLR + P R T
Sbjct: 157 NWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG-QWRWAMNLMDDMLRAAIAPSRST 215
Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
+N+L+ C G W A + +M G+ D+ T+N +L A G Q A M
Sbjct: 216 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK 275
Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM--KFLGIGLDRVSYNTVLSIYAKLGR 419
+ P+ T++ +I +K G+ AL++F+ M K D V++ +++ +Y+ G
Sbjct: 276 GAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE 335
Query: 420 FEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYST 479
E V + M + G++ + V+YNAL+G Y G + +K + + P++++Y+
Sbjct: 336 IENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 395
Query: 480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 539
L++ Y + +A ++F ++ K +VV Y+ALIDA NG + AV + +M ++G
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 540 IRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDN 599
I+PNVV+ +++ A RS K+ N+D + S Q G N
Sbjct: 456 IKPNVVSVCTLLAACSRS-----------------KKKVNVDTVLSA----AQSRGINLN 494
Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCN 659
A + G N E+ + ++Q M K K+K + VTF+ +++ R +
Sbjct: 495 T--------AAYNSAIGSYINAA--ELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 544
Query: 660 SFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWV-QALSLFDEVKL 706
+ +A L+E+ +VY +L Y V +A S+F+++K+
Sbjct: 545 KYPEAISYLKEMEDLSIPLTKEVYS---SVLCAYSKQGQVTEAESIFNQMKM 593
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 193/414 (46%), Gaps = 35/414 (8%)
Query: 148 KFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLG 207
K + C +D ++ L R W + F +++ K D + A+I+ GR G
Sbjct: 134 KIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPD-AETYDALINAHGRAG 192
Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
+ A N+ + L + ++ LI+A G SG +EA+ V M + P+LVT+N
Sbjct: 193 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 252
Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
V+ A K G + + F+ M V+PD TFN ++ S+ G A +LFN M
Sbjct: 253 IVLSAY-KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 311
Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
+ A C+ P+VVT+++++ Y+ G +++
Sbjct: 312 K-------------RAECR--------------------PDVVTFTSIMHLYSVKGEIEN 338
Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
+F M G+ + VSYN ++ YA G AL V +++ +GI D V+Y LL
Sbjct: 339 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 398
Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
YG+ + + + +F M+ + PN++TY+ LID Y G EA++IFR+ +Q G+K
Sbjct: 399 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 458
Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
+VV L+ A ++ + ++L GI N YNS I ++ +A E
Sbjct: 459 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 512
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 191/383 (49%), Gaps = 3/383 (0%)
Query: 159 YTFLLRELGNRGEWSKAIQCF-AFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
+ ++ L G+ S+A+ F + KR E + D S M + G+++ + +FE
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM-HLYSVKGEIENCRAVFE 344
Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
+ EG + +++AL+ AY G A+SV +K+ + P++V+Y ++++ G+
Sbjct: 345 AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 404
Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
K E+F M + +P+ +T+N+L+ G A +F +M GI ++ +
Sbjct: 405 QPGK-AKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 463
Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
TLL A + + +++ ++ I+ N Y++ I Y A L+ A+ ++ M+
Sbjct: 464 CTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK 523
Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
+ D V++ ++S ++ ++ EA+ KEME I Y+++L Y KQG+ E
Sbjct: 524 KKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTE 583
Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
+F QMK P+++ Y++++ Y+ + +A ++F E + G++ D + SAL+
Sbjct: 584 AESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMR 643
Query: 518 ALCKNGLVESAVSLLDEMTKEGI 540
A K G + L+D M ++ I
Sbjct: 644 AFNKGGQPSNVFVLMDLMREKEI 666
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 196/409 (47%), Gaps = 9/409 (2%)
Query: 171 EWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNT--- 227
++SKA+ F +K + + D + +I L +LG+ A ++F + + E
Sbjct: 263 QYSKALSYFEL-MKGAKVRPDTTTF-NIIIYCLSKLGQSSQALDLFNS-MREKRAECRPD 319
Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIF 287
V F++++ Y G + +VF +M LKPN+V+YNA++ A G+ + +
Sbjct: 320 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS-GTALSVL 378
Query: 288 DDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKG 347
D+ +NG+ PD +++ LL R A+ +F M ++ TYN L+DA
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 438
Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
+ A EI +M I PNVV+ T++ +++ + + + S + GI L+ +Y
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 498
Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
N+ + Y E+A+ + + M ++ D+VT+ L+ G + KY E ++M+
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
+ YS+++ YSK G EA IF + K AG + DV+ Y++++ A +
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 618
Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKE 576
A L EM GI P+ + ++++ AF + V DL ++KE
Sbjct: 619 ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVF--VLMDLMREKE 665
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 252/493 (51%), Gaps = 39/493 (7%)
Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
+ + +I L + +++ A+ +F+ L ++ ++ LI Y ++G +++ V M
Sbjct: 216 IYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM 275
Query: 255 KRYNLKPNLVTYNAVIDACGKGGV--DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
K +++P+L+T+N ++ K G+ D ++V++ D+ G PD TF+ L S
Sbjct: 276 KADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL---GFVPDAFTFSILFDGYSSN 332
Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
EAA ++ V G+ + +T + LL+A+CK +++ A EI+ AK + PN V Y
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
+TMIDGY + G L A M+ G+ D ++YN ++ + +LG E A +M+
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
G+ TYN L+GGYG++ ++D+ + ++M+ + PN+++Y TLI+ KG E
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
A + R+ + G+ V +Y+ LID C G +E A EM K+GI N+VTYN++ID
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
G S T GK E+ +L S+ K ++ T N +I +G
Sbjct: 573 --GLSMT------------GKLSEAEDLLLEISR--KGLKPDVFTYNSLISGYGF----- 611
Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
AG + RC + ++++M + IKP + T+ +++ C++ E L E+
Sbjct: 612 AGNVQ---RC-------IALYEEMKRSGIKPTLKTYHLLISLCTK-EGIELTERLFGEMS 660
Query: 673 LF-DNQVY-GVAH 683
L D VY GV H
Sbjct: 661 LKPDLLVYNGVLH 673
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 129/507 (25%), Positives = 247/507 (48%), Gaps = 29/507 (5%)
Query: 180 AFAVKREERKNDQGKLASAMISILGRLGK-VDLAKNIFETALNEGYGNTVYAFSALISAY 238
AF++ K+D + ++S+L K + A ++F NEG + + + L+
Sbjct: 98 AFSLSSPSLKHD---FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHL 154
Query: 239 GRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPD 298
++ + I+VF ++ + +P+ Y I A K D +E+F+ M + + P
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLS-DVGKGLELFNRMKHDRIYPS 213
Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMA 358
+N L+ +G A LF+EM+ R + + TYNTL+D CK + +F++
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273
Query: 359 EMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLG 418
M A +I P+++T++T++ G KAG ++DA N+ EMK LG D +++ + Y+
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
+ E AL V + SG++ +A T + LL K+GK ++ + + A + PN + Y+
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393
Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
T+ID Y + G A ++ G+K D + Y+ LI C+ G +E+A +++M +
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453
Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVE--RDLGKQKESAN----LDAMCSQD----- 587
G+ P+V TYN +I +GR + D ++ D G + ++ +C
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 588 ---DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
+D+++ G + ++++ L+ +GK E+ R ++M K I+ N
Sbjct: 514 QIVKRDMEDRGVSPK--VRIYNMLIDGCCSKGKIEDAFR--------FSKEMLKKGIELN 563
Query: 645 VVTFSAILNACSRCNSFEDASMLLEEL 671
+VT++ +++ S +A LL E+
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEI 590
Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 190/392 (48%), Gaps = 7/392 (1%)
Query: 160 TFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETA 219
+ LL L G+ KA + + + N+ + + MI R G + A+ E
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEV--IYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
+G A++ LI + G + A N MK + P++ TYN +I G+ +
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK-YE 474
Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
F +I +M NG P+ +++ +L+ +G A+ + +M RG+ + YN
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
L+D C +++ AF EM K I N+VTY+T+IDG + G+L +A ++ E+ G
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
+ D +YN+++S Y G + + + +EM+ SGI+ TY+ L+ K+G +
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTE 653
Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
R+F +M + P+LL Y+ ++ Y+ G ++A + ++ + + D Y++LI
Sbjct: 654 RLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQ 710
Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
K G + SL+DEM + P TYN I+
Sbjct: 711 LKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 170/370 (45%), Gaps = 32/370 (8%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+ +I LG+++ A+ +G +V ++ LI YGR + + M+
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
PN+V+Y +I+ KG + + + DM GV P +N L+ C G E
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQI-VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
A EM+ +GI+ ++ TYNTL+D + ++ A +++ E+ K + P+V TY+++I
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 377 DGYAKAGRLDDALNMFSEMKFLGI-----------------GL--------------DRV 405
GY AG + + ++ EMK GI G+ D +
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLL 666
Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
YN VL YA G E+A + K+M I D TYN+L+ G K GK EVR + ++M
Sbjct: 667 VYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 726
Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
A + P TY+ ++ + + Y A +RE ++ G DV + + L+ L +
Sbjct: 727 NAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRS 786
Query: 526 ESAVSLLDEM 535
+ A ++ EM
Sbjct: 787 KEAEIVISEM 796
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 194 bits (493), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/503 (26%), Positives = 236/503 (46%), Gaps = 55/503 (10%)
Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
I ++ + G ++ AK +F+ + G A+++LI Y R ++ + MK+ N+
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 260 KPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
+ TY V+ C G +D + I +M+ +G +P+ + + +L+ + + A
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAY--NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
+ EM +GI DIF YN+L+ + K +MD A + EM + PN TY I G
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
Y +A A EM+ G+ ++V +++ Y K G+ EA + M GI D
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591
Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
A TY L+ G K K D+ +F +M+ ++P++ +Y LI+ +SK G ++A IF
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
E + GL +V++Y+ L+ C++G +E A LLDEM+ +G+ PN VTY +IID + +S
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Query: 559 TTE----------------------------CTVDDVERDL--------GKQKESANLDA 582
C ++DVER + G +A +A
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNA 771
Query: 583 MCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI----LCILG------- 631
+ + V + G+T+ + +V +L+ + K N I LC G
Sbjct: 772 LINW----VFKFGKTELK-TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKE 826
Query: 632 VFQKMHKLKIKPNVVTFSAILNA 654
+F +M + P V+T++++LN
Sbjct: 827 LFHQMQNANLMPTVITYTSLLNG 849
Score = 159 bits (402), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 228/517 (44%), Gaps = 38/517 (7%)
Query: 209 VDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNA 268
VD A + E+ + +G Y + LI + ++A S+ M + + TY+
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 269 VIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
+ID KG + + +M+ +G+ ++ + V S+ G+ E A+ LF+ M+
Sbjct: 318 LIDGLLKGR-NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
G+ Y +L++ C+ + +E++ EM +NI + TY T++ G +G LD A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
N+ EM G + V Y T++ + + RF +A+ V KEM+ GI D YN+L+ G
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
K + DE R +M + + PN TY I Y + + A + +E ++ G+ +
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
VL + LI+ CK G V A S M +GI + TY +++ ++ VDD E
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND----KVDDAE 612
Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVA--EKAGQGKKENRCRQEI 626
+ + G+ + +G L+ K G +K +
Sbjct: 613 EIFREMR-------------------GKGIAPDVFSYGVLINGFSKLGNMQKAS------ 647
Query: 627 LCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLL 686
+F +M + + PNV+ ++ +L R E A LL+E+ + V + +
Sbjct: 648 ----SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 687 M-GY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
+ GY + +A LFDE+KL S Y L D
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 179/373 (47%), Gaps = 44/373 (11%)
Query: 232 SALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDML 291
+ LI+ Y + G EA S + SM + + TY +++ K EIF +M
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND-KVDDAEEIFREMR 619
Query: 292 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMD 351
G+ PD ++ L+ S+ G + A ++F+EMV G+ ++ YN LL C+ +++
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 352 LAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVL 411
A E++ EM K + PN VTY T+IDGY K+G L +A +F EMK G+ D Y T++
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Query: 412 SIYAKLGRFEEALLV-------C-------------------KEMESSGIRK-------- 437
+L E A+ + C E+++ + +
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799
Query: 438 ----DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
+ VTYN ++ K+G + + +F QM+ + P ++TY++L++ Y K G E
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 494 MQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM-----TKEGIRPNVVTYN 548
+F E AG++ D ++YS +I+A K G+ A+ L+D+M +G + ++ T
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919
Query: 549 SIIDAFGRSATTE 561
+++ F + E
Sbjct: 920 ALLSGFAKVGEME 932
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 192/392 (48%), Gaps = 18/392 (4%)
Query: 191 DQGKLASA-----MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
DQG L A +++ L + KVD A+ IF +G V+++ LI+ + + G Q
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644
Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
+A S+F+ M L PN++ YN ++ + G + + E+ D+M G+ P+ +T+ ++
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG-EIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 306 L-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
+ C G L EA R LF+EM +G+ D F Y TL+D C+ ++ A I K
Sbjct: 704 IDGYCKSGDLAEAFR-LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKG 761
Query: 365 ISPNVVTYSTMIDGYAKAGRLD---DALNMFSEMKFLGIGL-DRVSYNTVLSIYAKLGRF 420
+ + ++ +I+ K G+ + + LN + F G + V+YN ++ K G
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
E A + +M+++ + +TY +LL GY K G+ E+ +F++ A + P+ + YS +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Query: 481 IDVYSKGGLYKEAM----QIF-REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
I+ + K G+ +A+ Q+F + G K + AL+ K G +E A +++ M
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDV 567
+ P+ T +I+ S+ D V
Sbjct: 942 VRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/480 (20%), Positives = 197/480 (41%), Gaps = 115/480 (23%)
Query: 321 LFNEMVHRG-IDQDIFTYNT---------------LLDAICKGAQMDLAFEIMAEMPAKN 364
LF+ + +G I++ +F +++ LLDA+ + ++DL +++ M +N
Sbjct: 157 LFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERN 216
Query: 365 ISPNVVTYSTMIDGYAKAG---------------------RLDDALNMFSEMKFLGIGLD 403
+ +V TY +I + +AG +D AL + M G+
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPL 276
Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY-------------- 449
+ +Y+ ++ K+ R E+A + EM+S G+ D TY+ L+ G
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336
Query: 450 ---------------------GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGG 488
K+G ++ + +F+ M A + P Y++LI+ Y +
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396
Query: 489 LYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYN 548
++ ++ E K+ + Y ++ +C +G ++ A +++ EM G RPNVV Y
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 549 SIIDAFGRSATTECTVDDVERDLGKQKESANL-DAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
++I F +++ D R L + KE D C ++ II +
Sbjct: 457 TLIKTFLQNS----RFGDAMRVLKEMKEQGIAPDIFC------------YNSLIIGL--- 497
Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
+ K+ + R ++ +M + +KPN T+ A ++ + F A
Sbjct: 498 ------SKAKRMDEARSFLV-------EMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 668 LEELR---LFDNQVYGVAHGLLMGY-RDNIWVQALSLF----DEVKLMDSSTASAFYNAL 719
++E+R + N+V + GL+ Y + ++A S + D+ L D+ T + N L
Sbjct: 545 VKEMRECGVLPNKV--LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 200/363 (55%), Gaps = 3/363 (0%)
Query: 183 VKREERKNDQGKLAS--AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGR 240
V R ++ Q L + +++ L + G +DLA N+ V +S +I + +
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCK 272
Query: 241 SGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRI 300
+ +A+++F M+ ++PN++TY+++I +C + + DM+ + P+ +
Sbjct: 273 YRHEDDALNLFTEMENKGVRPNVITYSSLI-SCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 301 TFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
TFN+L+ + G A L++EM+ R ID DIFTY++L++ C ++D A + M
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
+K+ PNVVTY+T+I+G+ KA R+D+ + +F EM G+ + V+Y T++ + +
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
+ A +V K+M S G+ + +TYN LL G K GK ++ +FE ++ + P + TY+ +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
I+ K G ++ +F G+K DV++Y+ +I C+ GL E A +L +M ++G
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Query: 541 RPN 543
P+
Sbjct: 572 LPD 574
Score = 193 bits (491), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 198/357 (55%), Gaps = 7/357 (1%)
Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
K A + + + G + + +++ + G A ++ N M+ ++ N+V Y+
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 268 AVIDACGKGGVDFKH---VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
VID+ K ++H + +F +M GV+P+ IT++SL++ W A L ++
Sbjct: 265 TVIDSLCK----YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
M+ R I+ ++ T+N L+DA K ++ A ++ EM ++I P++ TYS++I+G+ R
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
LD+A +MF M + V+YNT+++ + K R +E + + +EM G+ + VTY
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
L+ G+ + D + +F+QM +D V PN++TY+TL+D K G ++AM +F +++
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
++ + Y+ +I+ +CK G VE L ++ +G++P+V+ YN++I F R E
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKE 557
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 215/444 (48%), Gaps = 42/444 (9%)
Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKN--DQGKLASAMISILGRLGKVDLA 212
G+ DY +LR + + AI F VK + + KL SA + ++ K DL
Sbjct: 49 GSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSA----IAKMKKFDLV 104
Query: 213 KNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
++ E G + +Y ++ LI+ + R A+++ M + +P++VT +++++
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 273 CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
G V + D M+ G +PD ITF +L+ A L + MV RG
Sbjct: 165 YCHGK-RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
++ TY +++ +CK +DLAF ++ +M A I NVV YST+ID K DDALN+F
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
+EM+ G+ + ++Y++++S R+ +A + +M I + VT+NAL+ + K+
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 453 GKY-----------------------------------DEVRRMFEQMKADCVSPNLLTY 477
GK DE + MFE M + PN++TY
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 478 STLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
+TLI+ + K E +++FRE Q GL + V Y+ LI + ++A + +M
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 538 EGIRPNVVTYNSIIDAFGRSATTE 561
+G+ PN++TYN+++D ++ E
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLE 487
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 228/514 (44%), Gaps = 60/514 (11%)
Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
K+D A +F + +++ F+ L+SA + IS+ M+R + NL TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 268 AVIDA-CGKG---------------------------------GVDFKHVVEIFDDMLRN 293
+I+ C + G V + D M+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 294 GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLA 353
G +PD ITF +L+ A L + MV RG ++ TY +++ +CK +DLA
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 354 FEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSI 413
F ++ +M A I NVV YST+ID K DDALN+F+EM+ G+ + ++Y++++S
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 414 YAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
R+ +A + +M I + VT+NAL+ + K+GK E +++++M + P+
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 474 LLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLD 533
+ TYS+LI+ + EA +F +VV Y+ LI+ CK ++ V L
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 534 EMTKEGIRPNVVTYNSIIDAF--------GRSATTECTVDDVERDLGKQKESANLDAMCS 585
EM++ G+ N VTY ++I F + + D V ++ + LD +C
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI--MTYNTLLDGLCK 482
Query: 586 QDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHK 638
G+ + ++ VF L K E +C G +F +
Sbjct: 483 N--------GKLEKAMV-VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Query: 639 LKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
+KP+V+ ++ +++ R E+A L ++R
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 190/423 (44%), Gaps = 51/423 (12%)
Query: 270 IDACGKG--GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
ID CG G F + ++LRNG+ ++ + A LF MV
Sbjct: 34 IDLCGMCYWGRAFSSGSGDYREILRNGLHSMKL---------------DDAIGLFGGMVK 78
Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
IF +N LL AI K + DL + +M IS N+ TY+ +I+ + + ++
Sbjct: 79 SRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISL 138
Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
AL + +M LG V+ +++L+ Y R +A+ + +M G R D +T+ L+
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
G K E + ++M PNL+TY +++ K G A + + + A ++A
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 258
Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR----SATTECT 563
+VV+YS +ID+LCK + A++L EM +G+RPNV+TY+S+I S +
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 564 VDDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIK-------------VFGQL 608
D +ER + + N +DA + + EA + +++IK + G
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEG--KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 609 VAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLL 668
+ ++ + K +F+ M PNVVT++ ++N + ++ L
Sbjct: 377 MHDRLDEAKH-------------MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 669 EEL 671
E+
Sbjct: 424 REM 426
Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 148/284 (52%), Gaps = 5/284 (1%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
Y+ L+ L N WS A + + ++R + N +A+I + GK+ A+ +++
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIER--KINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
+ ++ +S+LI+ + EA +F M + PN+VTYN +I+ C
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
+D VE+F +M + G+ + +T+ +L+ + + A+ +F +MV G+ +I TY
Sbjct: 416 ID--EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
NTLLD +CK +++ A + + + P + TY+ MI+G KAG+++D ++F +
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
G+ D + YNT++S + + G EEA + ++M G D+ T
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/315 (18%), Positives = 133/315 (42%), Gaps = 22/315 (6%)
Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
K D+ +F M P++ ++ L+ +K + + + + ++ G+ ++ Y+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF--GRSATTECTVDDVERDL 571
LI+ C+ + A++LL +M K G P++VT +S+++ + G+ + + D ++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 572 GKQKESANLDAMCSQ---DDKDVQEAGRTDNQI-------IKVFGQLVAEKAGQGKKENR 621
G + ++ + +K + D + + +G +V +G
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG----- 239
Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV 681
+I + KM KI+ NVV +S ++++ + +DA L E+ + +
Sbjct: 240 ---DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 682 AHGLLMGYRDNI--WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEG 739
+ L+ N W A L ++ + +NAL D G+ A+ + E
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 740 KRRQVWENVWSESCL 754
+R + ++++ S L
Sbjct: 357 IKRSIDPDIFTYSSL 371
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 193 bits (490), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 141/553 (25%), Positives = 263/553 (47%), Gaps = 46/553 (8%)
Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
V +++ +I+ + + G +A S ++ M + P++VTYN++I A C +D +E+
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMD--KAMEV 253
Query: 287 FDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
+ M++NGV PD +T+NS+L CS G EA +M G++ D+ TY+ L+D +C
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI-GFLKKMRSDGVEPDVVTYSLLMDYLC 312
Query: 346 KGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRV 405
K + A +I M + + P + TY T++ GYA G L + + M GI D
Sbjct: 313 KNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHY 372
Query: 406 SYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQM 465
++ ++ YAK G+ ++A+LV +M G+ +AVTY A++G K G+ ++ FEQM
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 466 KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLV 525
+ +SP + Y++LI ++ A ++ E G+ + + ++++ID+ CK G V
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 526 ESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN-LDAMC 584
+ L + M + G++PNV+TYN++I+ + C GK E+ L M
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGY-------CLA-------GKMDEAMKLLSGMV 538
Query: 585 SQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPN 644
S G N + + L+ + E+ L +F++M + P+
Sbjct: 539 S--------VGLKPNTV--TYSTLINGYCKISRMEDA--------LVLFKEMESSGVSPD 580
Query: 645 VVTFSAILNACSRCNSFEDASMLLEELRLFDNQV----YGVA-HGLLMGYRDNIWVQALS 699
++T++ IL + A L + Q+ Y + HGL ++ + AL
Sbjct: 581 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC---KNKLTDDALQ 637
Query: 700 LFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLM 759
+F + LMD + +N + D L G+ A+ + + + N W+ + +++
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII 697
Query: 760 SSGAARAMVHAWL 772
G + +L
Sbjct: 698 GQGLLEELDQLFL 710
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 194/365 (53%), Gaps = 3/365 (0%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+++I+ L + +D A + T + G +++++ Y SG +EAI M+
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
++P++VTY+ ++D K G +IFD M + G++P+ T+ +LL ++G L
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNG-RCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353
Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
E L + MV GI D + ++ L+ A K ++D A + ++M + ++PN VTY +
Sbjct: 354 EM-HGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAV 412
Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
I K+GR++DA+ F +M G+ + YN+++ ++E A + EM GI
Sbjct: 413 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 472
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
+ + +N+++ + K+G+ E ++FE M V PN++TY+TLI+ Y G EAM+
Sbjct: 473 CLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532
Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
+ GLK + V YS LI+ CK +E A+ L EM G+ P+++TYN I+
Sbjct: 533 LLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLF 592
Query: 556 RSATT 560
++ T
Sbjct: 593 QTRRT 597
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 182/342 (53%), Gaps = 3/342 (0%)
Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD 279
++G V +S L+ ++G C EA +F+SM + LKP + TY ++ KG +
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353
Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
H + D M+RNG+ PD F+ L+ ++ G + A +F++M +G++ + TY
Sbjct: 354 EMH--GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
++ +CK +++ A +M + +SP + Y+++I G + + A + EM G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
I L+ + +N+++ + K GR E+ + + M G++ + +TYN L+ GY GK DE
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531
Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
++ M + + PN +TYSTLI+ Y K ++A+ +F+E + +G+ D++ Y+ ++ L
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591
Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
+ +A L +T+ G + + TYN I+ ++ T+
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 633
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/568 (24%), Positives = 259/568 (45%), Gaps = 62/568 (10%)
Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN---LKPNLVTYNA 268
A+++F+ L G G ++Y + ++ R A+S +N M R + P+L TY
Sbjct: 34 ARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTYGI 92
Query: 269 VIDACGKGG-VDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMV 326
+I C + G +D ++++ G + D I F LL +C+ +A + M
Sbjct: 93 LIGCCCRAGRLDLGFAA--LGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEI---MAEMPAKNISPNVVTYSTMIDGYAKAG 383
G ++F+YN LL +C + A E+ MA+ P+VV+Y+T+I+G+ K G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
D A + + EM GI D V+YN++++ K ++A+ V M +G+ D +TYN
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
++L GY G+ E ++M++D V P+++TYS L+D K G EA +IF +
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 504 GLKADVVLY-----------------------------------SALIDALCKNGLVESA 528
GLK ++ Y S LI A K G V+ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN------LDA 582
+ + +M ++G+ PN VTY ++I +S E + E+ + + N +
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 583 MCSQDDKDVQEAGRTDNQIIKVF--GQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKL 639
+C+ + + R + I+++ G + ++ C++ ++ +F+ M ++
Sbjct: 451 LCTCNKWE-----RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505
Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQA 697
+KPNV+T++ ++N ++A LL + + V + L+ GY + + A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 698 LSLFDEVKLMDSSTASAFYNALTDMLWH 725
L LF E++ S YN + L+
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQ 593
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 186/358 (51%), Gaps = 1/358 (0%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
S ++ L + G+ A+ IF++ G + + L+ Y G E + + M R
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
+ P+ ++ +I A K G + +F M + G+ P+ +T+ +++ + + G E
Sbjct: 365 NGIHPDHYVFSILICAYAKQG-KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
A F +M+ G+ YN+L+ +C + + A E++ EM + I N + ++++I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
D + K GR+ ++ +F M +G+ + ++YNT+++ Y G+ +EA+ + M S G++
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
+ VTY+ L+ GY K + ++ +F++M++ VSP+++TY+ ++ + A ++
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603
Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
+ ++G + ++ Y+ ++ LCKN L + A+ + + ++ T+N +IDA
Sbjct: 604 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 211/492 (42%), Gaps = 89/492 (18%)
Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ---DIF 335
D +HV FD++LR G N LA +R AA + +N M G D+ D+
Sbjct: 33 DARHV---FDELLRRGRGASIYGLNRALADVARDS-PAAAVSRYNRMARAGADEVTPDLC 88
Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNIS----------------------------- 366
TY L+ C+ ++DL F + + K
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 367 -------PNVVTYSTMIDGYAKAGRLDDA---LNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
PNV +Y+ ++ G R +A L+M ++ + G D VSY TV++ + K
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
G ++A EM GI D VTYN+++ K D+ + M + V P+ +T
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
Y++++ Y G KEA+ ++ + G++ DVV YS L+D LCKNG A + D MT
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
K G++P + TY +++ + AT V+ LD M V+
Sbjct: 329 KRGLKPEITTYGTLLQGY---ATKGALVE----------MHGLLDLM-------VRNGIH 368
Query: 597 TDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACS 656
D+ VF L+ A QGK + Q +L VF KM + + PN VT+ A++
Sbjct: 369 PDHY---VFSILICAYAKQGKVD----QAML----VFSKMRQQGLNPNAVTYGAVIGILC 417
Query: 657 RCNSFEDASMLLEELRLFD------NQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDS 709
+ EDA + E+ + D N VY + HGL N W +A L E+
Sbjct: 418 KSGRVEDAMLYFEQ--MIDEGLSPGNIVYNSLIHGLCTC---NKWERAEELILEMLDRGI 472
Query: 710 STASAFYNALTD 721
+ F+N++ D
Sbjct: 473 CLNTIFFNSIID 484
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 192/388 (49%), Gaps = 18/388 (4%)
Query: 157 DDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
D Y F L+ +G+ +A+ F+ R++ N A+I IL + G+V+ A
Sbjct: 370 DHYVFSILICAYAKQGKVDQAM--LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 215 IFETALNEGY--GNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA 272
FE ++EG GN VY ++LI + A + M + N + +N++ID+
Sbjct: 428 YFEQMIDEGLSPGNIVY--NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 485
Query: 273 CGKGGVDFKHVVE---IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
K G V+E +F+ M+R GV+P+ IT+N+L+ G + A L + MV G
Sbjct: 486 HCKEG----RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
+ + TY+TL++ CK ++M+ A + EM + +SP+++TY+ ++ G + R A
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
++ + G ++ +YN +L K ++AL + + + ++ +A T+N ++
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661
Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADV 509
K G+ DE + +F ++ + PN TY + + GL +E Q+F + G D
Sbjct: 662 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDS 721
Query: 510 VLYSALIDALCKNGLVESA---VSLLDE 534
+ + ++ L + G + A +S++DE
Sbjct: 722 GMLNFIVRELLQRGEITRAGTYLSMIDE 749
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 2/293 (0%)
Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
G+V ++ +FE + G V ++ LI+ Y +G EA+ + + M LKPN VTY
Sbjct: 490 GRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 549
Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
+ +I+ K + + +F +M +GV PD IT+N +L + AA+ L+ +
Sbjct: 550 STLINGYCKIS-RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608
Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
G ++ TYN +L +CK D A ++ + ++ T++ MID K GR D
Sbjct: 609 ESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRND 668
Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
+A ++F G+ + +Y + G EE + ME +G D+ N ++
Sbjct: 669 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728
Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFRE 499
++G+ + S T S ID+ S GG Y+E + E
Sbjct: 729 RELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLS-GGKYQEYYRFLPE 780
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 192 bits (489), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 185/366 (50%), Gaps = 3/366 (0%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
S MI+ R K+ A + + GY F+ L++ EA+ + + M
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 257 YNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
KP L+T N +++ C G V V + D M+ G QP+ +T+ +L V + G
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKV--SDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
A L +M R I D Y+ ++D +CK +D AF + EM K +++TY+T+
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
I G+ AGR DD + +M I + V+++ ++ + K G+ EA + KEM GI
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
+ +TYN+L+ G+ K+ + +E +M + M + P+++T++ LI+ Y K + ++
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
+FRE G+ A+ V Y+ L+ C++G +E A L EM +RP++V+Y ++D
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Query: 556 RSATTE 561
+ E
Sbjct: 485 DNGELE 490
Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 182/371 (49%), Gaps = 4/371 (1%)
Query: 184 KREER--KNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
K EER K D K S +I L + G +D A N+F +G+ + ++ LI + +
Sbjct: 253 KMEERNIKLDAVKY-SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
G + + M + + PN+VT++ +ID+ K G + ++ +M++ G+ P+ IT
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEG-KLREADQLLKEMMQRGIAPNTIT 370
Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
+NSL+ + E A + + M+ +G D DI T+N L++ CK ++D E+ EM
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
+ + N VTY+T++ G+ ++G+L+ A +F EM + D VSY +L G E
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
+AL + ++E S + D Y ++ G K D+ +F + V + Y+ +I
Sbjct: 491 KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550
Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
+ +A +FR+ + G D + Y+ LI A + +A L++EM G
Sbjct: 551 SELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFP 610
Query: 542 PNVVTYNSIID 552
+V T +I+
Sbjct: 611 ADVSTVKMVIN 621
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 203/436 (46%), Gaps = 31/436 (7%)
Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
+A+ +F M + P ++ +N + A K ++ V+ + M G+ T + +
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTK-QYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
+ R A + +++ G + D +NTLL+ +C ++ A E++ M
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
P ++T +T+++G G++ DA+ + M G + V+Y VL++ K G+ A+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
+ ++ME I+ DAV Y+ ++ G K G D +F +M+ +++TY+TLI +
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
G + + ++ R+ + + +VV +S LID+ K G + A LL EM + GI PN +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 546 TYNSIIDAFGRSATTECTVDDVERDLGKQKE------SANLDAMCSQDDKDVQEAGRTDN 599
TYNS+ID F + E + V+ + K + + ++ C +A R D+
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC--------KANRIDD 421
Query: 600 QIIKVFGQLVAEKAGQGKKENRCRQEIL----CILG-------VFQKMHKLKIKPNVVTF 648
+ +L E + +G N L C G +FQ+M +++P++V++
Sbjct: 422 GL-----ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 649 SAILNACSRCNSFEDA 664
+L+ E A
Sbjct: 477 KILLDGLCDNGELEKA 492
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 184/400 (46%), Gaps = 31/400 (7%)
Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
G G+ V++F DM+++ P I FN L + ++ +E L +M +GI
Sbjct: 63 GLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHS 122
Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
I+T + +++ C+ ++ AF M ++ P+ V ++T+++G R+ +AL +
Sbjct: 123 IYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVD 182
Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
M +G ++ NT+++ G+ +A+++ M +G + + VTY +L K G
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242
Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
+ + +M+ + + + YS +ID K G A +F E + G KAD++ Y+
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
LI C G + LL +M K I PNVVT++ +ID+F + GK
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE--------------GK 348
Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
+E+ L K++ + G N I + L+ KENR + I + +
Sbjct: 349 LREADQL-------LKEMMQRGIAPNTI--TYNSLIDGFC----KENRLEEAIQMVDLMI 395
Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 673
K P+++TF+ ++N + N +D L E+ L
Sbjct: 396 SK----GCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 157/326 (48%), Gaps = 1/326 (0%)
Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
G+ D + + V FS LI ++ + G +EA + M + + PN +TY
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
N++ID K + +++ D M+ G PD +TFN L+ + + LF EM
Sbjct: 372 NSLIDGFCKEN-RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
RG+ + TYNTL+ C+ ++++A ++ EM ++ + P++V+Y ++DG G L+
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
AL +F +++ + LD Y ++ + ++A + + G++ DA YN ++
Sbjct: 491 KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550
Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
++ + +F +M + +P+ LTY+ LI + A ++ E K +G
Sbjct: 551 SELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFP 610
Query: 507 ADVVLYSALIDALCKNGLVESAVSLL 532
ADV +I+ L L +S + +L
Sbjct: 611 ADVSTVKMVINMLSSGELDKSFLDML 636
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 192 bits (489), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 206/406 (50%), Gaps = 47/406 (11%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
S I+ R ++ LA I + GYG ++ ++L++ + EA+++ + M
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKH-----VVEIFDDMLRNGVQPDRITFNSLL-AVCS 310
+P+ VT+ ++ F+H V + + M+ G QPD +T+ +++ +C
Sbjct: 174 MGYQPDTVTFTTLVHGL------FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 311 RG--------------GLWEA--------------------ARNLFNEMVHRGIDQDIFT 336
RG G EA A +LFN+M +GI D+FT
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM- 395
YN L+ +C + A ++++M KNI+P++V ++ +ID + K G+L +A ++ EM
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
K D V+YNT++ + K R EE + V +EM G+ + VTY L+ G+ +
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
D + +F+QM +D V P+++TY+ L+D G + A+ +F ++ +K D+V Y+ +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
I+ALCK G VE L ++ +G++PNVVTY +++ F R E
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 513
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 189/346 (54%), Gaps = 8/346 (2%)
Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
A + E + +G + + A+I+ + G A+++ N M++ ++ ++V YN +ID
Sbjct: 199 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 272 ACGKGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHR 328
K +KH+ ++F+ M G++PD T+N L++ G W A L ++M+ +
Sbjct: 259 GLCK----YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK 314
Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM-PAKNISPNVVTYSTMIDGYAKAGRLDD 387
I+ D+ +N L+DA K ++ A ++ EM +K+ P+VV Y+T+I G+ K R+++
Sbjct: 315 NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE 374
Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
+ +F EM G+ + V+Y T++ + + + A +V K+M S G+ D +TYN LL
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
G G + +FE M+ + +++TY+T+I+ K G ++ +F G+K
Sbjct: 435 GLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKP 494
Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
+VV Y+ ++ C+ GL E A +L EM ++G PN TYN++I A
Sbjct: 495 NVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 196/398 (49%), Gaps = 10/398 (2%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS--AMISILGRLGKVDLAKNIF 216
+T L+ L + S+A+ V+R K Q L + A+I+ L + G+ DLA N+
Sbjct: 183 FTTLVHGLFQHNKASEAVA----LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGK 275
V ++ +I + + +A +FN M+ +KP++ TYN +I C
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 276 GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH-RGIDQDI 334
G + + DML + PD + FN+L+ + G A L++EMV + D+
Sbjct: 299 G--RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
YNTL+ CK +++ E+ EM + + N VTY+T+I G+ +A D+A +F +
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
M G+ D ++YN +L G E AL+V + M+ ++ D VTY ++ K GK
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
++ +F + V PN++TY+T++ + + GL +EA +F E K+ G + Y+
Sbjct: 477 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNT 536
Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
LI A ++G ++ L+ EM G + T+ + +
Sbjct: 537 LIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTN 574
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 221/484 (45%), Gaps = 14/484 (2%)
Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
+AI +F M + P++V ++ ++ A K F V+ + + M G+ + T++
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMN-KFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
+ R A + +M+ G I T N+LL+ C G ++ A ++ +M
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
P+ VT++T++ G + + +A+ + M G D V+Y V++ K G + AL
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
+ +ME I D V YN ++ G K D+ +F +M+ + P++ TY+ LI
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK-EGIRPNV 544
G + +A ++ + + + D+V ++ALIDA K G + A L DEM K + P+V
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
V YN++I F + E + +V R++ ++ N + Q + Q+ V
Sbjct: 357 VAYNTLIKGFCKYKRVEEGM-EVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM--V 413
Query: 605 FGQLVAEKAGQGKKENRCRQEILC-------ILGVFQKMHKLKIKPNVVTFSAILNACSR 657
F Q+V++ + LC L VF+ M K +K ++VT++ ++ A +
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 658 CNSFEDASMLLEELRLFDNQVYGVAHGLLM-GY-RDNIWVQALSLFDEVKLMDSSTASAF 715
ED L L L + V + +M G+ R + +A +LF E+K S
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 716 YNAL 719
YN L
Sbjct: 534 YNTL 537
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 190/397 (47%), Gaps = 18/397 (4%)
Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLAS----- 197
++++ K C D T+ ++ L RGE A+ K ++GK+ +
Sbjct: 202 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL--------NKMEKGKIEADVVIY 253
Query: 198 -AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+I L + +D A ++F +G V+ ++ LIS G +A + + M
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNG-VQPDRITFNSLLAVCSRGGLW 315
N+ P+LV +NA+IDA K G +++D+M+++ PD + +N+L+ +
Sbjct: 314 KNINPDLVFFNALIDAFVKEG-KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
E +F EM RG+ + TY TL+ + D A + +M + + P+++TY+ +
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
+DG G ++ AL +F M+ + LD V+Y T++ K G+ E+ + + G+
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
+ + VTY ++ G+ ++G +E +F +MK D PN TY+TLI + G + +
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLL 532
+ +E + G D + + + L L +S + +L
Sbjct: 553 LIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDML 589
Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 106/208 (50%)
Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
++D A + +M P++V +S ++ AK + D +++ +M+ LGI + +Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
++ + + + AL + +M G VT N+LL G+ + E + +QM
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
P+ +T++TL+ + EA+ + G + D+V Y A+I+ LCK G + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
++LL++M K I +VV YN+IID +
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 131/292 (44%), Gaps = 25/292 (8%)
Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
E F G D N + L + ++A+ + +M S V ++ LL K
Sbjct: 31 ERSFAGASSDDCRENLSRKVLQDL-KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMN 89
Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
K+D V + EQM+ +S NL TYS I+ + + A+ I + + G +V +
Sbjct: 90 KFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLN 149
Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
+L++ C + AV+L+D+M + G +P+ VT+ +++ + V VER + K
Sbjct: 150 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209
Query: 574 QKE------SANLDAMCSQDDKDV-------QEAGRTDNQIIKVFGQLVAEKAGQGKKEN 620
+ A ++ +C + + D+ E G+ + ++ ++ ++ +
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV-IYNTII---------DG 259
Query: 621 RCR-QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
C+ + + +F KM IKP+V T++ +++ + DAS LL ++
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 192 bits (489), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 197/364 (54%), Gaps = 3/364 (0%)
Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
L + G +DLA ++ + V ++ +I + + +A+++F M ++P+
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
+ TY+++I C G + + DM+ + P+ +TF++L+ + G A L
Sbjct: 293 VFTYSSLISCLCNYG--RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
++EM+ R ID DIFTY++L++ C ++D A + M +K+ PNVVTYST+I G+ K
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
A R+++ + +F EM G+ + V+Y T++ + + + A +V K+M S G+ + +T
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
YN LL G K GK + +FE ++ + P++ TY+ +I+ K G ++ ++F
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
G+ +V+ Y+ +I C+ G E A SLL +M ++G PN TYN++I A R E
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
Query: 562 CTVD 565
+ +
Sbjct: 591 ASAE 594
Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 231/485 (47%), Gaps = 50/485 (10%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
S I+ R ++ LA + + GY + S+L++ Y S +A+++ + M
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKH-----VVEIFDDMLRNGVQPDRITFNSLL-AVCS 310
KP+ T+ +I F H V + D M++ G QPD +T+ +++ +C
Sbjct: 182 MGYKPDTFTFTTLIHGL------FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
RG + + A +L +M I+ D+ YNT++D +CK MD A + EM K I P+V
Sbjct: 236 RGDI-DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
TYS++I GR DA + S+M I + V+++ ++ + K G+ EA + EM
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
I D TY++L+ G+ + DE + MFE M + PN++TYSTLI + K
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
+E M++FRE Q GL + V Y+ LI + ++A + +M G+ PN++TYN +
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 551 IDAF---GRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQ 607
+D G+ A + ++R S + D+ T N +I+ G
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQR---------------STMEPDIY----TYNIMIE--GM 513
Query: 608 LVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
A K G E+ C L + + PNV+ ++ +++ R S E+A L
Sbjct: 514 CKAGKVEDG-------WELFCNLSL------KGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 668 LEELR 672
L++++
Sbjct: 561 LKKMK 565
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 196/366 (53%), Gaps = 9/366 (2%)
Query: 188 RKNDQGKLAS------AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRS 241
+K ++GK+ + +I L + +D A N+F N+G V+ +S+LIS
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 242 GYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT 301
G +A + + M + PN+VT++A+IDA K G +++D+M++ + PD T
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG-KLVEAEKLYDEMIKRSIDPDIFT 365
Query: 302 FNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEM 360
++SL+ C L EA +++F M+ + ++ TY+TL+ CK +++ E+ EM
Sbjct: 366 YSSLINGFCMHDRLDEA-KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 361 PAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRF 420
+ + N VTY+T+I G+ +A D+A +F +M +G+ + ++YN +L K G+
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 421 EEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTL 480
+A++V + ++ S + D TYN ++ G K GK ++ +F + VSPN++ Y+T+
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM 544
Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
I + + G +EA + ++ K+ G + Y+ LI A ++G E++ L+ EM G
Sbjct: 545 ISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Query: 541 RPNVVT 546
+ T
Sbjct: 605 AGDAST 610
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 207/429 (48%), Gaps = 41/429 (9%)
Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
V++F DM+++ P + FN LL+ ++ +E +L +M GI D++TY+ ++
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINC 127
Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
C+ +Q+ LA ++A+M P++VT S++++GY + R+ DA+ + +M +G D
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
++ T++ + EA+ + +M G + D VTY ++ G K+G D + +
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
+M+ + +++ Y+T+ID K +A+ +F E G++ DV YS+LI LC G
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDD-VERDLGKQ--KES 577
A LL +M + I PNVVT++++IDAF G+ E D+ ++R + S
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 578 ANLDAMCSQD-------------DKDVQEAGRTDNQIIKVFG---------QLVAEKAGQ 615
+ ++ C D KD T + +IK F +L E + +
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Query: 616 GKKENRCRQEILCILG------------VFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
G N L I G VF++M + + PN++T++ +L+ +
Sbjct: 428 GLVGNTVTYTTL-IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 486
Query: 664 ASMLLEELR 672
A ++ E L+
Sbjct: 487 AMVVFEYLQ 495
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 162/312 (51%), Gaps = 9/312 (2%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
Y+ L+ L N G WS A + + ++R + N SA+I + GK+ A+ +++
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIER--KINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
+ ++ +S+LI+ + EA +F M + PN+VTY+ +I KG
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI----KGFC 409
Query: 279 DFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
K V +E+F +M + G+ + +T+ +L+ + + A+ +F +MV G+ +I
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
TYN LLD +CK ++ A + + + P++ TY+ MI+G KAG+++D +F +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
G+ + ++YNT++S + + G EEA + K+M+ G ++ TYN L+ + G
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDR 589
Query: 456 DEVRRMFEQMKA 467
+ + ++M++
Sbjct: 590 EASAELIKEMRS 601
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 157/341 (46%), Gaps = 41/341 (12%)
Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
N L D I ++D A ++ +M P++V ++ ++ AK + + +++ +M+
Sbjct: 56 NRLSDII----KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
LGI D +Y+ ++ + + + AL V +M G D VT ++LL GY + +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
+ +QM P+ T++TLI EA+ + + Q G + D+V Y +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKES 577
LCK G ++ A+SLL +M K I +VV YN+IID + +DD
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK----HMDDA---------- 277
Query: 578 ANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
L+ D+K + R D + + L++ G+ + R + M
Sbjct: 278 --LNLFTEMDNKGI----RPD---VFTYSSLISCLCNYGRWSDASR--------LLSDMI 320
Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQV 678
+ KI PNVVTFSA+++A F L+E +L+D +
Sbjct: 321 ERKINPNVVTFSALIDA------FVKEGKLVEAEKLYDEMI 355
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 229/475 (48%), Gaps = 34/475 (7%)
Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
+I + +LG++ A ++ +GY V ++S +++ Y R G + + MKR
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
LKPN Y ++I + E F +M+R G+ PD + + +L+ C RG + A
Sbjct: 312 LKPNSYIYGSIIGLLCRI-CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI-RA 369
Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
A F EM R I D+ TY ++ C+ M A ++ EM K + P+ VT++ +I+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
GY KAG + DA + + M G + V+Y T++ K G + A + EM G++
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
+ TYN+++ G K G +E ++ + +A ++ + +TY+TL+D Y K G +A +I
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
+E GL+ +V ++ L++ C +G++E LL+ M +GI PN T+NS++ +
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY--- 606
Query: 558 ATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGK 617
C +++ + +A MCS + V G+T ++K G K
Sbjct: 607 ----CIRNNL------KAATAIYKDMCS---RGVGPDGKTYENLVK----------GHCK 643
Query: 618 KENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
N L FQ+M +V T+S ++ + F +A + +++R
Sbjct: 644 ARNMKEAWFL-----FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 184/328 (56%), Gaps = 3/328 (0%)
Query: 228 VYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEI 286
V +++ +I + G +EA + M+ P++++Y+ V++ C G +D V ++
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD--KVWKL 303
Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
+ M R G++P+ + S++ + R A F+EM+ +GI D Y TL+D CK
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
+ A + EM +++I+P+V+TY+ +I G+ + G + +A +F EM G+ D V+
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
+ +++ Y K G ++A V M +G + VTY L+ G K+G D + +M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
+ PN+ TY+++++ K G +EA+++ EF+ AGL AD V Y+ L+DA CK+G ++
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
A +L EM +G++P +VT+N +++ F
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 179/342 (52%), Gaps = 3/342 (0%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+A+IS ++G + A +F +G F+ LI+ Y ++G+ ++A V N M +
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
PN+VTY +ID K G D E+ +M + G+QP+ T+NS++ +C G +
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEG-DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
EA + L E G++ D TY TL+DA CK +MD A EI+ EM K + P +VT++ +
Sbjct: 509 EAVK-LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
++G+ G L+D + + M GI + ++N+++ Y + A + K+M S G+
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
D TY L+ G+ K E +F++MK S ++ TYS LI + K + EA +
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 537
+F + ++ GL AD ++ D K ++ V +DE+ +
Sbjct: 688 VFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 166 bits (421), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 135/527 (25%), Positives = 235/527 (44%), Gaps = 56/527 (10%)
Query: 224 YGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHV 283
+G+ F G +EA VF M Y L ++ + N + K
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATA 230
Query: 284 VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDA 343
+ +F + GV + ++N ++ + G + A +L M +G D+ +Y+T+++
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290
Query: 344 ICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLD 403
C+ ++D ++++ M K + PN Y ++I + +L +A FSEM GI D
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 404 RVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFE 463
V Y T++ + K G A EM S I D +TY A++ G+ + G E ++F
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 464 QMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
+M + P+ +T++ LI+ Y K G K+A ++ QAG +VV Y+ LID LCK G
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 524 LVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANL--- 580
++SA LL EM K G++PN+ TYNSI++ +S E V L + E+A L
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV-----KLVGEFEAAGLNAD 525
Query: 581 --------DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEIL----C 628
DA C + D + +++ E G+G + +L C
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQ-------------EILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 629 ILGVFQKMHKL-------KIKPNVVTFSAILNACSRCNSFEDASMLLEEL---------R 672
+ G+ + KL I PN TF++++ N+ + A+ + +++ +
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 673 LFDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNAL 719
++N V G M +A LF E+K S + + Y+ L
Sbjct: 633 TYENLVKGHCKARNMK-------EAWFLFQEMKGKGFSVSVSTYSVL 672
Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 183/373 (49%), Gaps = 3/373 (0%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+ +I + G + A F + V ++A+IS + + G EA +F+ M
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
L+P+ VT+ +I+ K G K + + M++ G P+ +T+ +L+ +C G L
Sbjct: 415 KGLEPDSVTFTELINGYCKAG-HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL- 472
Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
++A L +EM G+ +IFTYN++++ +CK ++ A +++ E A ++ + VTY+T+
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
+D Y K+G +D A + EM G+ V++N +++ + G E+ + M + GI
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
+A T+N+L+ Y + +++ M + V P+ TY L+ + K KEA
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
+F+E K G V YS LI K A + D+M +EG+ + ++ D
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKY 712
Query: 556 RSATTECTVDDVE 568
+ + VD ++
Sbjct: 713 KGKRPDTIVDPID 725
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 234/480 (48%), Gaps = 44/480 (9%)
Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
+I+ R ++ LA + + GY ++ S+L++ Y +A+++ + M
Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 110
Query: 259 LKPNLVTYNAVIDACGKGGVDFKH-----VVEIFDDMLRNGVQPDRITFNSLL-AVCSRG 312
+P+ +T+ +I F H V + D M++ G QP+ +T+ ++ +C RG
Sbjct: 111 YRPDTITFTTLIHGL------FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164
Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
+ + A NL N+M I+ D+ +NT++D++CK +D A + EM K I PNVVTY
Sbjct: 165 DI-DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
S++I GR DA + S+M I + V++N ++ + K G+F EA + +M
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
I D TYN+L+ G+ + D+ ++MFE M + P+L TY+TLI + K ++
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
++FRE GL D V Y+ LI L +G ++A + +M +G+ P+++TY+ ++D
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 553 AFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEK 612
+ E ++ + QK LD I ++ ++
Sbjct: 404 GLCNNGKLEKALEVFDY---MQKSEIKLD--------------------IYIYTTMIEGM 440
Query: 613 AGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
GK ++ ++ C L + +KPNVVT++ +++ ++A LL++++
Sbjct: 441 CKAGKVDD--GWDLFCSLSL------KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Score = 190 bits (483), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 193/357 (54%), Gaps = 3/357 (0%)
Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
L + G +DLA N+ V F+ +I + + + +A+++F M+ ++PN
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
+VTY+++I C G + ++ DM+ + P+ +TFN+L+ + G + A L
Sbjct: 220 VVTYSSLISCLCSYG--RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
++M+ R ID DIFTYN+L++ C ++D A ++ M +K+ P++ TY+T+I G+ K
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
+ R++D +F EM G+ D V+Y T++ G + A V K+M S G+ D +T
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397
Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
Y+ LL G GK ++ +F+ M+ + ++ Y+T+I+ K G + +F
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
G+K +VV Y+ +I LC L++ A +LL +M ++G P+ TYN++I A R
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 173/339 (51%), Gaps = 1/339 (0%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+ +I L + VD A N+F+ +G V +S+LIS G +A + + M
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
+ PNLVT+NA+IDA K G F ++ DDM++ + PD T+NSL+ +
Sbjct: 249 KKINPNLVTFNALIDAFVKEG-KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
A+ +F MV + D+ TYNTL+ CK +++ E+ EM + + + VTY+T+I
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
G G D+A +F +M G+ D ++Y+ +L G+ E+AL V M+ S I+
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
D Y ++ G K GK D+ +F + V PN++TY+T+I L +EA +
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
++ K+ G D Y+ LI A ++G ++ L+ EM
Sbjct: 488 LKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 163/307 (53%), Gaps = 6/307 (1%)
Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
M+++ P FN LL+ ++ ++ +L +M GI +++TYN L++ C+ +Q
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
+ LA ++ +M P++VT S++++GY R+ DA+ + +M +G D +++ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
++ + EA+ + M G + + VTY ++ G K+G D + +M+A
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
+ +++ ++T+ID K +A+ +F+E + G++ +VV YS+LI LC G A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDD-VERDLGKQKESAN--LDAM 583
LL +M ++ I PN+VT+N++IDAF G+ E DD ++R + + N ++
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 584 CSQDDKD 590
C D D
Sbjct: 301 CMHDRLD 307
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 148/294 (50%), Gaps = 1/294 (0%)
Query: 261 PNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
P++ +N ++ A K F V+ + + M R G+ + T+N L+ R A
Sbjct: 8 PSIFEFNKLLSAIAKMK-KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
L +M+ G + I T ++LL+ C G ++ A ++ +M P+ +T++T+I G
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
+ +A+ + M G + V+Y V++ K G + A + +ME++ I D V
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREF 500
+N ++ K D+ +F++M+ + PN++TYS+LI G + +A Q+ +
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 501 KQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
+ + ++V ++ALIDA K G A L D+M K I P++ TYNS+I+ F
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 154/312 (49%), Gaps = 9/312 (2%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
Y+ L+ L + G WS A Q + + E++ N +A+I + GK A+ + +
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMI--EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280
Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
+ ++ +++LI+ + +A +F M + P+L TYN +I KG
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI----KGFC 336
Query: 279 DFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
K V E+F +M G+ D +T+ +L+ G + A+ +F +MV G+ DI
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
TY+ LLD +C +++ A E+ M I ++ Y+TMI+G KAG++DD ++F +
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
G+ + V+YNT++S +EA + K+M+ G D+ TYN L+ + + G
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516
Query: 456 DEVRRMFEQMKA 467
+ +M++
Sbjct: 517 AASAELIREMRS 528
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 151/561 (26%), Positives = 260/561 (46%), Gaps = 26/561 (4%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
++MI +L + ++D A +FE YA++ +I YG +G EA S+ +
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 257 YNLKPNLVTYNAVIDACGK-GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLW 315
P+++ YN ++ K G VD +++F++M ++ P+ T+N L+ + R G
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVD--EALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKL 393
Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
+ A L + M G+ ++ T N ++D +CK ++D A + EM K +P+ +T+ ++
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGI 435
IDG K GR+DDA ++ +M + + Y +++ + GR E+ + K+M +
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
D N + K G+ ++ R MFE++KA P+ +YS LI K G E +
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 555
+F K+ G D Y+ +ID CK G V A LL+EM +G P VVTY S+ID
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 556 RSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQ 615
+ + E K+ E N+ S D + GR D + ++ E +
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIE-LNVVIYSSLID-GFGKVGRIDEAYL-----ILEELMQK 686
Query: 616 GKKENRCR-----------QEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
G N +EI L FQ M +LK PN VT+ ++N + F A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 665 SMLLEELRLFDNQVYGVAHGLL---MGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
+ +E++ + +++ + + NI +A +LFD K SA YNA+ +
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNI-AEAGALFDRFKANGGVPDSACYNAMIE 805
Query: 722 MLWHFGQKRGAQLVVLEGKRR 742
L + + A + E +RR
Sbjct: 806 GLSNGNRAMDAFSLFEETRRR 826
Score = 160 bits (404), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 197/437 (45%), Gaps = 43/437 (9%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASA---MISILGRLGKVDLAKNI 215
Y +L L G+ +A++ F EE K D S +I +L R GK+D A +
Sbjct: 346 YNCILTCLRKMGKVDEALKVF------EEMKKDAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 216 FETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGK 275
++ G V + ++ +S EA ++F M P+ +T+ ++ID GK
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Query: 276 -GGVDFKHVV---------------------------------EIFDDMLRNGVQPDRIT 301
G VD + V +I+ DM+ PD
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQL 519
Query: 302 FNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMP 361
N+ + + G E R +F E+ R D +Y+ L+ + K + +E+ M
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579
Query: 362 AKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFE 421
+ + Y+ +IDG+ K G+++ A + EMK G V+Y +V+ AK+ R +
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 422 EALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
EA ++ +E +S I + V Y++L+ G+GK G+ DE + E++ ++PNL T+++L+
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 482 DVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 541
D K EA+ F+ K+ + V Y LI+ LCK A EM K+G++
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 542 PNVVTYNSIIDAFGRSA 558
P+ ++Y ++I ++
Sbjct: 760 PSTISYTTMISGLAKAG 776
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 231/491 (47%), Gaps = 25/491 (5%)
Query: 197 SAMISILGRLGKV---DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
SA +++G V D+ +F+ GY TV+ F+ LI + + G A+S+ +
Sbjct: 169 SAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228
Query: 254 MKRYNLKPNLVTYNAVIDACGK-GGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
MK +L ++V YN ID+ GK G VD + F ++ NG++PD +T+ S++ V +
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAW--KFFHEIEANGLKPDEVTYTSMIGVLCKA 286
Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
+ A +F + + YNT++ + D A+ ++ AK P+V+ Y
Sbjct: 287 NRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAY 346
Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
+ ++ K G++D+AL +F EMK + +YN ++ + + G+ + A + M+
Sbjct: 347 NCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
+G+ + T N ++ K K DE MFE+M +P+ +T+ +LID K G +
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDD 465
Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
A +++ + + + + ++Y++LI +G E + +M + P++ N+ +D
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525
Query: 553 AFGRSATTE---CTVDDVE-RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQL 608
++ E ++++ R S ++ + +AG N+ ++F +
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI------HGLIKAGFA-NETYELFYSM 578
Query: 609 VAEKAGQGKKENRCRQEILCILG----VFQKMHKLKIK---PNVVTFSAILNACSRCNSF 661
+ + + C G +Q + ++K K P VVT+ ++++ ++ +
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 662 EDASMLLEELR 672
++A ML EE +
Sbjct: 639 DEAYMLFEEAK 649
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 206/438 (47%), Gaps = 7/438 (1%)
Query: 145 ILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISI 202
+ ++ ++K+C D+ TF L+ LG G A + + + + R N + +++I
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTN--SIVYTSLIKN 491
Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
G+ + I++ +N+ + + + ++G ++ ++F +K P+
Sbjct: 492 FFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551
Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 322
+Y+ +I K G E+F M G D +N ++ + G A L
Sbjct: 552 ARSYSILIHGLIKAGFA-NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
EM +G + + TY +++D + K ++D A+ + E +K I NVV YS++IDG+ K
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
GR+D+A + E+ G+ + ++N++L K EAL+ + M+ + VTY
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730
Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
L+ G K K+++ +++M+ + P+ ++Y+T+I +K G EA +F FK
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790
Query: 503 AGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE- 561
G D Y+A+I+ L A SL +E + G+ + T ++D ++ E
Sbjct: 791 NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQ 850
Query: 562 -CTVDDVERDLGKQKESA 578
V V R+ GK + +A
Sbjct: 851 AAIVGAVLRETGKARHAA 868
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 132/606 (21%), Positives = 257/606 (42%), Gaps = 80/606 (13%)
Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETAL 220
F++ L + ++AI+ F + +R E + S ++ ++ R D I
Sbjct: 67 FVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLL-VMARCRNFDALDQILGEMS 125
Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDF 280
G+G +V ++ ++ +E V M+++ +P Y +I A
Sbjct: 126 VAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFS------ 179
Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
V D ML LF +M G + + + TL
Sbjct: 180 --AVNHSDMML----------------------------TLFQQMQELGYEPTVHLFTTL 209
Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
+ K ++D A ++ EM + ++ ++V Y+ ID + K G++D A F E++ G+
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
D V+Y +++ + K R +EA+ + + +E + YN ++ GYG GK+DE
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
+ E+ +A P+++ Y+ ++ K G EA+++F E K+ ++ Y+ LID LC
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLC 388
Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE-------------CTVDDV 567
+ G +++A L D M K G+ PNV T N ++D +S + CT D++
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 568 E-----RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
LGK +D +K + RT N I V+ L+ G+KE+
Sbjct: 449 TFCSLIDGLGK---VGRVDDAYKVYEKMLDSDCRT-NSI--VYTSLIKNFFNHGRKEDGH 502
Query: 623 RQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQV 678
+ +++ M P++ + ++ + E + EE++ + D +
Sbjct: 503 K--------IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 554
Query: 679 YGV-AHGLL-MGYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVV 736
Y + HGL+ G+ + + S+ ++ ++D+ YN + D G+ A ++
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA----YNIVIDGFCKCGKVNKAYQLL 610
Query: 737 LEGKRR 742
E K +
Sbjct: 611 EEMKTK 616
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 207/489 (42%), Gaps = 36/489 (7%)
Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
+F + +I +M G P T ++ C + ++ M Y
Sbjct: 113 NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYT 172
Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
TL+ A D+ + +M P V ++T+I G+AK GR+D AL++ EMK
Sbjct: 173 TLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS 232
Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEV 458
+ D V YN + + K+G+ + A E+E++G++ D VTY +++G K + DE
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292
Query: 459 RRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDA 518
MFE ++ + P Y+T+I Y G + EA + + G V+ Y+ ++
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
Query: 519 LCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESA 578
L K G V+ A+ + +EM K+ PN+ TYN +ID R+ GK +
Sbjct: 353 LRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRA--------------GKLDTAF 397
Query: 579 NL-DAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMH 637
L D+M Q+AG N ++ +V K + C +F++M
Sbjct: 398 ELRDSM--------QKAGLFPN--VRTVNIMVDRLCKSQKLDEAC--------AMFEEMD 439
Query: 638 KLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMG--YRDNIWV 695
P+ +TF ++++ + +DA + E++ D + + + L+ +
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 696 QALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLD 755
++ ++ + S N D ++ G+ + + E K R+ + S S L
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 756 LHLMSSGAA 764
L+ +G A
Sbjct: 560 HGLIKAGFA 568
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 155/585 (26%), Positives = 263/585 (44%), Gaps = 49/585 (8%)
Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
+ LI Y R G Q+++ +F M Y P++ T NA++ + K G D V +
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS-VWSFLKE 183
Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
ML+ + PD TFN L+ V G +E + L +M G I TYNT+L CK +
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
A E++ M +K + +V TY+ +I ++ R+ + +M+ I + V+YNT
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303
Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
+++ ++ G+ A + EM S G+ + VT+NAL+ G+ +G + E +MF M+A
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
++P+ ++Y L+D K + A + K+ G+ + Y+ +ID LCKNG ++ AV
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAF---GRSATTECTVDDVERDLGKQKESANLDAM--- 583
LL+EM+K+GI P++VTY+++I+ F GR T + V + R +G +
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR-VGLSPNGIIYSTLIYN 482
Query: 584 -----CSQDDKDVQEA----GRTDNQIIKVFGQLV-----AEKAGQGKKENRCRQ----- 624
C ++ + EA G T + F LV A K + ++ RC
Sbjct: 483 CCRMGCLKEAIRIYEAMILEGHTRDHF--TFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 625 -----------------EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASML 667
E L VF +M K+ P T+ ++L + +A
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 668 LEELRLFDNQVYGVAHGLLMG--YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWH 725
L+ L V V + L+ + +A+SLF E+ S Y +L L
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660
Query: 726 FGQKRGAQLVVLEGKRR-QVWENVWSESCLDLHLMSSGAARAMVH 769
G+ A L E + R V N +C + +G +A ++
Sbjct: 661 KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 705
Score = 182 bits (463), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 214/467 (45%), Gaps = 35/467 (7%)
Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
GKV +A + L+ G F+ALI + G +EA+ +F M+ L P+ V+Y
Sbjct: 312 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 371
Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
++D K +F + M RNGV RIT+ ++ + G + A L NEM
Sbjct: 372 GVLLDGLCKNA-EFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430
Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
GID DI TY+ L++ CK + A EI+ + +SPN + YST+I + G L
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
+A+ ++ M G D ++N +++ K G+ EA + M S GI + V+++ L+
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550
Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
GYG G+ + +F++M P TY +L+ KGG +EA + +
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 610
Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDD 566
D V+Y+ L+ A+CK+G + AVSL EM + I P+ TY S+I R T +
Sbjct: 611 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-- 668
Query: 567 VERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
K+ E+ N+++ KAGQ K
Sbjct: 669 ---LFAKEAEA---------------RGNVLPNKVMYTCFVDGMFKAGQWKA-------- 702
Query: 627 LCILGVF--QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
G++ ++M L P++VT +A+++ SR E + LL E+
Sbjct: 703 ----GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745
Score = 172 bits (437), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 184/361 (50%), Gaps = 3/361 (0%)
Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
+I++L G + + + + GY T+ ++ ++ Y + G + AI + + MK
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258
Query: 259 LKPNLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
+ ++ TYN +I D C + ++ + DM + + P+ +T+N+L+ S G
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYL--LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 316
Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
A L NEM+ G+ + T+N L+D A ++ M AK ++P+ V+Y ++D
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 376
Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
G K D A + MK G+ + R++Y ++ K G +EA+++ EM GI
Sbjct: 377 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 436
Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
D VTY+AL+ G+ K G++ + + ++ +SPN + YSTLI + G KEA++I+
Sbjct: 437 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 496
Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRS 557
G D ++ L+ +LCK G V A + MT +GI PN V+++ +I+ +G S
Sbjct: 497 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 556
Query: 558 A 558
Sbjct: 557 G 557
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 184/372 (49%), Gaps = 3/372 (0%)
Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
DLA+ + G ++ +I ++G+ EA+ + N M + + P++VTY+A+
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 444
Query: 270 IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
I+ K G FK EI + R G+ P+ I +++L+ C R G + A ++ M+ G
Sbjct: 445 INGFCKVG-RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
+D FT+N L+ ++CK ++ A E M M + I PN V++ +I+GY +G A
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 563
Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
++F EM +G +Y ++L K G EA K + + D V YN LL
Sbjct: 564 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623
Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG-LKAD 508
K G + +F +M + P+ TY++LI + G A+ +E + G + +
Sbjct: 624 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 683
Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
V+Y+ +D + K G ++ + ++M G P++VT N++ID + R E T +D+
Sbjct: 684 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT-NDLL 742
Query: 569 RDLGKQKESANL 580
++G Q NL
Sbjct: 743 PEMGNQNGGPNL 754
Score = 152 bits (385), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 128/508 (25%), Positives = 234/508 (46%), Gaps = 16/508 (3%)
Query: 169 RGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTV 228
R + +K I C + V + G + S +I R+G + A I+E + EG+
Sbjct: 453 RFKTAKEIVCRIYRVGL----SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDH 508
Query: 229 YAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFD 288
+ F+ L+++ ++G EA M + PN V+++ +I+ G G K +FD
Sbjct: 509 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK-AFSVFD 567
Query: 289 DMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGA 348
+M + G P T+ SLL +GG A + D YNTLL A+CK
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL-DRVSY 407
+ A + EM ++I P+ TY+++I G + G+ A+ E + G L ++V Y
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 687
Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
+ K G+++ + ++M++ G D VT NA++ GY + GK ++ + +M
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747
Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
PNL TY+ L+ YSK + ++R G+ D + +L+ +C++ ++E
Sbjct: 748 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807
Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD--DVERDLGKQKESANLDAMCS 585
+ +L G+ + T+N +I + D V LG + DAM S
Sbjct: 808 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 867
Query: 586 QDDKD--VQEAGRTDNQIIKVFGQLVAEKAGQ--GKKENRCR-QEILCILGVFQKMHKLK 640
+++ QE+ +++ K Q ++ ++ + G CR +I V ++M K
Sbjct: 868 VLNRNHRFQESRMVLHEMSK---QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924
Query: 641 IKPNVVTFSAILNACSRCNSFEDASMLL 668
I P V SA++ A ++C ++A++LL
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLL 952
Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 186/415 (44%), Gaps = 6/415 (1%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKN--DQGKLASAMISILGRLGKVDLAKNIF 216
YT L+ L +G+ AI FA + E R N + + + + + G+
Sbjct: 651 YTSLISGLCRKGKTVIAI---LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 707
Query: 217 ETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKG 276
E N G+ + +A+I Y R G ++ + M N PNL TYN ++ K
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767
Query: 277 GVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
D ++ ++ NG+ PD++T +SL+ + E + + RG++ D +T
Sbjct: 768 K-DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT 826
Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
+N L+ C +++ AF+++ M + IS + T M+ + R ++ + EM
Sbjct: 827 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886
Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
GI + Y +++ ++G + A +V +EM + I V +A++ K GK D
Sbjct: 887 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 946
Query: 457 EVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALI 516
E + M + P + +++TL+ + K G EA+++ GLK D+V Y+ LI
Sbjct: 947 EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1006
Query: 517 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
LC G + A L +EM +G N TY ++I T D + +DL
Sbjct: 1007 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDL 1061
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 141/343 (41%), Gaps = 47/343 (13%)
Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
N +P+V Y +I Y + G + D+L +F M G + N +L K G
Sbjct: 120 NSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 177
Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
KEM I D T+N L+ +G +++ + ++M+ +P ++TY+T++
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237
Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
Y K G +K A+++ K G+ ADV Y+ LI LC++ + LL +M K I PN
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 544 VVTYNSIIDAFGRSA---------------------TTECTVDDVERDLGKQKESAN--- 579
VTYN++I+ F T + D G KE+
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 580 -----------------LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRC 622
LD +C + D+ R +K G V G + C
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDL---ARGFYMRMKRNGVCVGRITYTGMIDGLC 414
Query: 623 RQEILC-ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
+ L + + +M K I P++VT+SA++N + F+ A
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 457
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 192/357 (53%), Gaps = 3/357 (0%)
Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
+ +++ R ++ LA + + G+ ++ F +L++ + R +A+ +F+ M
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178
Query: 256 RYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
KPN+V YN +ID C VD + +++ + M ++G+ PD +T+NSL++ G
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVD--NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
W A + + M R I D+FT+N L+DA K ++ A E EM +++ P++VTYS
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
+I G RLD+A MF M G D V+Y+ +++ Y K + E + + EM G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
+ ++ VTY L+ GY + GK + +F +M V PN++TY+ L+ G ++A+
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
I + ++ G+ AD+V Y+ +I +CK G V A + + +G+ P++ TY +++
Sbjct: 417 VILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 170 bits (430), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 170/332 (51%), Gaps = 1/332 (0%)
Query: 212 AKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVID 271
A +F+ + GY V ++ +I +S A+ + N M++ + P++VTYN++I
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
Query: 272 ACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
G + + M + + PD TFN+L+ C + G A + EM+ R +D
Sbjct: 230 GLCSSG-RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
DI TY+ L+ +C +++D A E+ M +K P+VVTYS +I+GY K+ +++ + +
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
F EM G+ + V+Y ++ Y + G+ A + + M G+ + +TYN LL G
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
GK ++ + M+ + + +++TY+ +I K G +A I+ GL D+
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
Y+ ++ L K GL A +L +M ++GI PN
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 173/312 (55%), Gaps = 3/312 (0%)
Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
+ + +I L + +VD A ++ +G G V +++LIS SG +A + + M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGG 313
+ + P++ T+NA+IDAC K G E +++M+R + PD +T++ L+ +C
Sbjct: 248 TKREIYPDVFTFNALIDACVKEG-RVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 314 LWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS 373
L E A +F MV +G D+ TY+ L++ CK +++ ++ EM + + N VTY+
Sbjct: 307 LDE-AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 374 TMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS 433
+I GY +AG+L+ A +F M F G+ + ++YN +L G+ E+AL++ +M+ +
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425
Query: 434 GIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEA 493
G+ D VTYN ++ G K G+ + ++ + + P++ TY+T++ K GL +EA
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA 485
Query: 494 MQIFREFKQAGL 505
+FR+ K+ G+
Sbjct: 486 DALFRKMKEDGI 497
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 188/401 (46%), Gaps = 34/401 (8%)
Query: 275 KGGVDFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGID 331
+ G+ F + +++F M++ P F+ LL+ S+ ++ L+ +M GI
Sbjct: 54 RNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIP 113
Query: 332 QDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNM 391
++ T N LL+ C+ +Q+ LA + +M P++VT+ ++++G+ + R+ DAL M
Sbjct: 114 HNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYM 173
Query: 392 FSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGK 451
F +M +G + V YNT++ K + + AL + ME GI D VTYN+L+ G
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 452 QGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVL 511
G++ + RM M + P++ T++ LID K G EA + + E + L D+V
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 512 YSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL 571
YS LI LC ++ A + M +G P+VVTY+ +I+ + +S E
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE---------- 343
Query: 572 GKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG 631
+ C + V T +I+ G A K ++
Sbjct: 344 ------HGMKLFCEMSQRGVVRNTVTYTILIQ--GYCRAGKLNVAEE------------- 382
Query: 632 VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
+F++M + PN++T++ +L+ E A ++L +++
Sbjct: 383 IFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 160/313 (51%), Gaps = 1/313 (0%)
Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
+++ +F M + P++ ++ ++ A K + V+ +++ M G+ + T N L
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMK-KYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
L R A + +M+ G + I T+ +LL+ C+G ++ A + +M
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
PNVV Y+T+IDG K+ ++D+AL++ + M+ GIG D V+YN+++S GR+ +A
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
+ M I D T+NAL+ K+G+ E +E+M + P+++TYS LI
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
EA ++F G DVV YS LI+ CK+ VE + L EM++ G+ N V
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 546 TYNSIIDAFGRSA 558
TY +I + R+
Sbjct: 363 TYTILIQGYCRAG 375
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 149/333 (44%), Gaps = 42/333 (12%)
Query: 144 DILKKFEFKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMIS 201
D+L + E G D T+ L+ L + G WS A + + KRE +
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD----------- 255
Query: 202 ILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKP 261
V+ F+ALI A + G EA + M R +L P
Sbjct: 256 --------------------------VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 262 NLVTYNAVI-DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARN 320
++VTY+ +I C +D E+F M+ G PD +T++ L+ + E
Sbjct: 290 DIVTYSLLIYGLCMYSRLD--EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 321 LFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYA 380
LF EM RG+ ++ TY L+ C+ ++++A EI M + PN++TY+ ++ G
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407
Query: 381 KAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAV 440
G+++ AL + ++M+ G+ D V+YN ++ K G +A + + G+ D
Sbjct: 408 DNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIW 467
Query: 441 TYNALLGGYGKQGKYDEVRRMFEQMKADCVSPN 473
TY ++ G K+G E +F +MK D + PN
Sbjct: 468 TYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 101/187 (54%)
Query: 372 YSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEME 431
Y M+ + +LDD+L++F M ++ +LS +K+ +++ + + ++M+
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
GI + T N LL + + + +M P+++T+ +L++ + +G
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
+A+ +F + G K +VV+Y+ +ID LCK+ V++A+ LL+ M K+GI P+VVTYNS+I
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 552 DAFGRSA 558
S
Sbjct: 229 SGLCSSG 235
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 190 bits (482), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 205/408 (50%), Gaps = 10/408 (2%)
Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETAL 220
+ R + G + + ++ F + VK+ +++ + + + R ++DL IF +
Sbjct: 159 LVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRR--RIDLCLEIFRRMV 216
Query: 221 NEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDF 280
+ G TVY+ + ++ R G +++ + +KP TYN +I+A K DF
Sbjct: 217 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQR-DF 275
Query: 281 KHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
V + M ++GV +++T+ L+ + + G A LF+EM RGI+ D+ Y +L
Sbjct: 276 SGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL 335
Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
+ C+ M AF + E+ K +SP+ TY +IDG K G + A + +EM+ G+
Sbjct: 336 ISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395
Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
+ +V +NT++ Y + G +EA ++ ME G + D T N + + + +YDE ++
Sbjct: 396 NITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQ 455
Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
+M V + ++Y+ LIDVY K G +EA ++F E G++ + + Y+ +I A C
Sbjct: 456 WLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYC 515
Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
K G ++ A L M G+ P+ TY S+I EC D+V+
Sbjct: 516 KQGKIKEARKLRANMEANGMDPDSYTYTSLIHG-------ECIADNVD 556
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 162/313 (51%), Gaps = 1/313 (0%)
Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
GK+ A+ +F+ G + V+ +++LIS R G + A +F+ + L P+ TY
Sbjct: 308 GKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTY 367
Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMV 326
A+ID K G + + ++M GV ++ FN+L+ R G+ + A +++ M
Sbjct: 368 GALIDGVCKVG-EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVME 426
Query: 327 HRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLD 386
+G D+FT NT+ + + D A + + M + + V+Y+ +ID Y K G ++
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE 486
Query: 387 DALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
+A +F EM G+ + ++YN ++ Y K G+ +EA + ME++G+ D+ TY +L+
Sbjct: 487 EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Query: 447 GGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLK 506
G DE R+F +M + N +TY+ +I SK G EA ++ E K+ G
Sbjct: 547 HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYT 606
Query: 507 ADVVLYSALIDAL 519
D +Y+ALI ++
Sbjct: 607 IDNKVYTALIGSM 619
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 198/447 (44%), Gaps = 28/447 (6%)
Query: 313 GLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
G++E +F+ MV +G+ D + L A K ++DL EI M + V +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
+ +++G + G ++ + + E GI + +YNT+++ Y K F V K M+
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
G+ + VTY L+ K GK + ++F++M+ + ++ Y++LI + G K
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
A +F E + GL Y ALID +CK G + +A L++EM +G+ V +N++ID
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 553 AFGRSATTE--CTVDDVERDLGKQKE--SANLDAMCSQDDKDVQEAG----RTDNQIIKV 604
+ R + + DV G Q + + N A C K EA R +K+
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL 467
Query: 605 ----FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
+ L+ +G E R +F +M ++PN +T++ ++ A +
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKR--------LFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 661 FEDASMLLEELRLF----DNQVY-GVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAF 715
++A L + D+ Y + HG + DN+ +A+ LF E+ L S
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIA--DNVD-EAMRLFSEMGLKGLDQNSVT 576
Query: 716 YNALTDMLWHFGQKRGAQLVVLEGKRR 742
Y + L G+ A + E KR+
Sbjct: 577 YTVMISGLSKAGKSDEAFGLYDEMKRK 603
Score = 42.4 bits (98), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 105/264 (39%), Gaps = 33/264 (12%)
Query: 483 VYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRP 542
VY G+++E +++F + GL D + A K ++ + + M G++
Sbjct: 163 VYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKI 222
Query: 543 NVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII 602
V + +++ C +VE+ KE + K ++ T N II
Sbjct: 223 TVYSLTIVVEGL-------CRRGEVEKSKKLIKEFSV---------KGIKPEAYTYNTII 266
Query: 603 KVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFE 662
+ V ++ G + GV + M K + N VT++ ++ +
Sbjct: 267 NAY---VKQRDFSG------------VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMS 311
Query: 663 DASMLLEELRL--FDNQVYGVAHGLLMGYRDNIWVQALSLFDEVKLMDSSTASAFYNALT 720
DA L +E+R ++ V+ + R +A LFDE+ S +S Y AL
Sbjct: 312 DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 721 DMLWHFGQKRGAQLVVLEGKRRQV 744
D + G+ A++++ E + + V
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGV 395
Score = 36.6 bits (83), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+ MI + GK+ A+ + G Y +++LI + EA+ +F+ M
Sbjct: 508 NVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGL 567
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA 307
L N VTY +I K G ++D+M R G D + +L+
Sbjct: 568 KGLDQNSVTYTVMISGLSKAGKS-DEAFGLYDEMKRKGYTIDNKVYTALIG 617
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 189 bits (480), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 145/466 (31%), Positives = 224/466 (48%), Gaps = 35/466 (7%)
Query: 200 ISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNL 259
I +LGR GK++ A I + +EG G V ++ LI A + A VF MK
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH 324
Query: 260 KPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAA 318
KP+ VTY ++D D V + + +M ++G PD +TF L+ A+C G EA
Sbjct: 325 KPDRVTYITLLDRFSDNR-DLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
L + M +GI ++ TYNTL+ + + ++D A E+ M + + P TY ID
Sbjct: 384 DTL-DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442
Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
Y K+G AL F +MK GI + V+ N L AK GR EA + ++ G+ D
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR 498
+VTYN ++ Y K G+ DE ++ +M + P+++ ++LI+ K EA ++F
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 499 EFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
K+ LK VV Y+ L+ L KNG ++ A+ L + M ++G PN +T+N++ D
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD------ 616
Query: 559 TTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKK 618
C + E L + +D C D T N II FG + K GQ K
Sbjct: 617 ---CLCKNDEVTLALKMLFKMMDMGCVPD-------VFTYNTII--FGLV---KNGQVK- 660
Query: 619 ENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
E +C F +M KL + P+ VT +L + + EDA
Sbjct: 661 ------EAMCF---FHQMKKL-VYPDFVTLCTLLPGVVKASLIEDA 696
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 179/354 (50%), Gaps = 24/354 (6%)
Query: 210 DLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAV 269
DL +I A G N V +FS + A +G C++ S+ + RY+ K N V+
Sbjct: 718 DLIGSILAEA---GIDNAV-SFSERLVA---NGICRDGDSILVPIIRYSCKHNNVS---- 766
Query: 270 IDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
+ + E F L GVQP T+N L+ + E A+++F ++ G
Sbjct: 767 ---------GARTLFEKFTKDL--GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815
Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
D+ TYN LLDA K ++D FE+ EM N +T++ +I G KAG +DDAL
Sbjct: 816 CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875
Query: 390 NMFSE-MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
+++ + M +Y ++ +K GR EA + + M G R + YN L+ G
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
+GK G+ D +F++M + V P+L TYS L+D G E + F+E K++GL D
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 509 VVLYSALIDALCKNGLVESAVSLLDEM-TKEGIRPNVVTYNSIIDAFGRSATTE 561
VV Y+ +I+ L K+ +E A+ L +EM T GI P++ TYNS+I G + E
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 173/370 (46%), Gaps = 36/370 (9%)
Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
G+ Y+++ LI +S +C EA+ V+ M +P+L TY++++ GK D
Sbjct: 183 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR-DIDS 241
Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
V+ + +M G++P+ TF + V R G A + M G D+ TY L+D
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 343 AICKGAQMDLAFEIM-----------------------------------AEMPAKNISP 367
A+C ++D A E+ +EM P
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
+VVT++ ++D KAG +A + M+ GI + +YNT++ ++ R ++AL +
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
MES G++ A TY + YGK G FE+MK ++PN++ + + +K
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481
Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
G +EA QIF K GL D V Y+ ++ K G ++ A+ LL EM + G P+V+
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 548 NSIIDAFGRS 557
NS+I+ ++
Sbjct: 542 NSLINTLYKA 551
Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 171/342 (50%), Gaps = 4/342 (1%)
Query: 212 AKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
A+ +FE + G + ++ LI + + A VF +K P++ TYN ++
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE-MVHRG 329
DA GK G + E++ +M + + + IT N +++ + G + A +L+ + M R
Sbjct: 828 DAYGKSG-KIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886
Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
TY L+D + K ++ A ++ M PN Y+ +I+G+ KAG D A
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
+F M G+ D +Y+ ++ +GR +E L KE++ SG+ D V YN ++ G
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Query: 450 GKQGKYDEVRRMFEQMKAD-CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
GK + +E +F +MK ++P+L TY++LI G+ +EA +I+ E ++AGL+ +
Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1066
Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
V ++ALI +G E A ++ M G PN TY +
Sbjct: 1067 VFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 234/522 (44%), Gaps = 55/522 (10%)
Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
M+ ++G++D A + + G V ++LI+ ++ EA +F MK
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEA 317
LKP +VTYN ++ GK G + +E+F+ M++ G P+ ITFN+L +C + A
Sbjct: 569 LKPTVVTYNTLLAGLGKNG-KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
+ LF +M+ G D+FTYNT++ + K Q+ A +M K + P+ VT T++
Sbjct: 628 LKMLF-KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLP 685
Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVS----YNTVLSIYAKLGRFEEALLVCKEMESS 433
G KA ++DA + + FL D+ + + + SI A+ G + A+ + + ++
Sbjct: 686 GVVKASLIEDAYKIIT--NFLYNCADQPANLFWEDLIGSILAEAG-IDNAVSFSERLVAN 742
Query: 434 GIRKDAVTYNALLGGYG-KQGKYDEVRRMFEQMKADC-VSPNLLTYSTLIDVYSKGGLYK 491
GI +D + + Y K R +FE+ D V P L TY+ LI + + +
Sbjct: 743 GICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIE 802
Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
A +F + K G DV Y+ L+DA K+G ++ L EM+ N +T+N +I
Sbjct: 803 IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVI 862
Query: 552 DAFGRSATTECTVD---DV--ERDL----------------------GKQKESANLDAMC 584
++ + +D D+ +RD KQ LD C
Sbjct: 863 SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC 922
Query: 585 SQD-------DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILG------ 631
+ +AG D +F ++V E K + LC++G
Sbjct: 923 RPNCAIYNILINGFGKAGEAD-AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 632 -VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR 672
F+++ + + P+VV ++ I+N + + E+A +L E++
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMK 1023
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/501 (23%), Positives = 210/501 (41%), Gaps = 82/501 (16%)
Query: 247 AISVFNSMK-RYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
+ S F S+ NL T N +++A G + + +FD M + ++ D T+ ++
Sbjct: 101 SFSYFKSVAGNLNLVHTTETCNYMLEALRVDG-KLEEMAYVFDLMQKRIIKRDTNTYLTI 159
Query: 306 LAVCS-RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
S +GGL +A L +M G + ++YN L+ + K A E+ M +
Sbjct: 160 FKSLSVKGGLKQAPYAL-RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG 218
Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
P++ TYS+++ G K +D + + EM+ LG+ + ++ + + + G+ EA
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
+ K M+ G D VTY L+ K D + +FE+MK P+ +TY TL+D +
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
S Q + E ++ G DVV ++ L+DALCK G A LD M +GI PN+
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Query: 545 VTYNSI-----------------------------------IDAFGRSATTECTVDDVER 569
TYN++ ID +G+S + ++ E+
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 570 DLGKQKESANLDAMCSQDDKDVQEAGR---------------------TDNQIIKVFGQL 608
K K A C+ + +AGR T N ++K + ++
Sbjct: 459 --MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 516
Query: 609 ----VAEKAGQGKKENRCRQEILCI----------------LGVFQKMHKLKIKPNVVTF 648
A K EN C +++ + +F +M ++K+KP VVT+
Sbjct: 517 GEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTY 576
Query: 649 SAILNACSRCNSFEDASMLLE 669
+ +L + ++A L E
Sbjct: 577 NTLLAGLGKNGKIQEAIELFE 597
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 108/199 (54%), Gaps = 4/199 (2%)
Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
+I L + G++ AK +FE L+ G ++ LI+ +G++G A ++F M +
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
++P+L TY+ ++D C G VD + F ++ +G+ PD + +N ++ + E
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVD--EGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEE 1014
Query: 318 ARNLFNEM-VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
A LFNEM RGI D++TYN+L+ + ++ A +I E+ + PNV T++ +I
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Query: 377 DGYAKAGRLDDALNMFSEM 395
GY+ +G+ + A ++ M
Sbjct: 1075 RGYSLSGKPEHAYAVYQTM 1093
Score = 86.7 bits (213), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
Y L+ L G +A Q F + R N + + +I+ G+ G+ D A +F+
Sbjct: 894 YGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN--CAIYNILINGFGKAGEADAACALFKR 951
Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
+ EG + +S L+ G E + F +K L P++V YN +I+ GK
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH- 1010
Query: 279 DFKHVVEIFDDM-LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
+ + +F++M G+ PD T+NSL+ G+ E A ++NE+ G++ ++FT+
Sbjct: 1011 RLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1070
Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
N L+ + + A+ + M SPN TY +
Sbjct: 1071 NALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 179/334 (53%), Gaps = 1/334 (0%)
Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
G+ + F++L++ Y ++AI++F+ + KPN+VTY +I K H
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR-HLNH 206
Query: 283 VVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLD 342
VE+F+ M NG +P+ +T+N+L+ G W A L +M+ R I+ ++ T+ L+D
Sbjct: 207 AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266
Query: 343 AICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGL 402
A K ++ A E+ M ++ P+V TY ++I+G G LD+A MF M+ G
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 403 DRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
+ V Y T++ + K R E+ + + EM G+ + +TY L+ GY G+ D + +F
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 463 EQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKN 522
QM + P++ TY+ L+D G ++A+ IF ++ + ++V Y+ +I +CK
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 523 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 556
G VE A L + +G++PNV+TY ++I F R
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 177/340 (52%), Gaps = 1/340 (0%)
Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
+++ A +F+ L G+ V ++ LI ++ + A+ +FN M +PN+VTYN
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227
Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
A++ + G + + DM++ ++P+ ITF +L+ + G A+ L+N M+
Sbjct: 228 ALVTGLCEIG-RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
+ D+FTY +L++ +C +D A ++ M PN V Y+T+I G+ K+ R++D
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
+ +F EM G+ + ++Y ++ Y +GR + A V +M S D TYN LL
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
G GK ++ +FE M+ + N++TY+ +I K G ++A +F G+K
Sbjct: 407 GLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKP 466
Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
+V+ Y+ +I C+ GL+ A SL +M ++G PN Y
Sbjct: 467 NVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 194/405 (47%), Gaps = 24/405 (5%)
Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
G + F +++F M+ + P I F LL+V ++ ++ +LF +M GI
Sbjct: 58 GLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPL 117
Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
+ T N ++ +C +Q A + +M P++VT++++++GY R++DA+ +F
Sbjct: 118 LCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFD 177
Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
++ +G + V+Y T++ K A+ + +M ++G R + VTYNAL+ G + G
Sbjct: 178 QILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIG 237
Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
++ + + M + PN++T++ LID + K G EA +++ Q + DV Y
Sbjct: 238 RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG 297
Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
+LI+ LC GL++ A + M + G PN V Y ++I F +S E + + ++ +
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM-KIFYEMSQ 356
Query: 574 QKESAN-------LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEI 626
+ AN + C DV + +VF Q+ + +A + +
Sbjct: 357 KGVVANTITYTVLIQGYCLVGRPDVAQ---------EVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 627 LCILG-------VFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
LC G +F+ M K ++ N+VT++ I+ + EDA
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDA 452
Score = 155 bits (393), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 200/446 (44%), Gaps = 32/446 (7%)
Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEI 286
++ F+ L+S + IS+F M+ + P L T N V+ +
Sbjct: 82 SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC-F 140
Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
M++ G +PD +TF SLL E A LF++++ G ++ TY TL+ +CK
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
++ A E+ +M PNVVTY+ ++ G + GR DA + +M I + ++
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
+ ++ + K+G+ EA + M + D TY +L+ G G DE R+MF M+
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVE 526
+ PN + Y+TLI + K ++ M+IF E Q G+ A+ + Y+ LI C G +
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 527 SAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ 586
A + ++M+ P++ TYN ++D + GK +++ + +
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN--------------GKVEKALMIFEYMRK 426
Query: 587 DDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVV 646
+ D+ I + ++ GK E+ +F + +KPNV+
Sbjct: 427 REMDIN---------IVTYTIIIQGMCKLGKVEDA--------FDLFCSLFSKGMKPNVI 469
Query: 647 TFSAILNACSRCNSFEDASMLLEELR 672
T++ +++ R +A L ++++
Sbjct: 470 TYTTMISGFCRRGLIHEADSLFKKMK 495
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 157/316 (49%), Gaps = 1/316 (0%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+ +I L + ++ A +F G V ++AL++ G +A + M +
Sbjct: 192 TTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK 251
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
++PN++T+ A+IDA K G E+++ M++ V PD T+ SL+ GL +
Sbjct: 252 RRIEPNVITFTALIDAFVKVG-KLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD 310
Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
AR +F M G + Y TL+ CK +++ +I EM K + N +TY+ +I
Sbjct: 311 EARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLI 370
Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
GY GR D A +F++M D +YN +L G+ E+AL++ + M +
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD 430
Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
+ VTY ++ G K GK ++ +F + + + PN++TY+T+I + + GL EA +
Sbjct: 431 INIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSL 490
Query: 497 FREFKQAGLKADVVLY 512
F++ K+ G + +Y
Sbjct: 491 FKKMKEDGFLPNESVY 506
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 134/284 (47%), Gaps = 3/284 (1%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
Y L+ L G W A +KR N +A+I ++GK+ AK ++
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT--FTALIDAFVKVGKLMEAKELYNV 283
Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
+ V+ + +LI+ G EA +F M+R PN V Y +I K
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK- 342
Query: 279 DFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYN 338
+ ++IF +M + GV + IT+ L+ G + A+ +FN+M R DI TYN
Sbjct: 343 RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYN 402
Query: 339 TLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFL 398
LLD +C +++ A I M + + N+VTY+ +I G K G+++DA ++F +
Sbjct: 403 VLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK 462
Query: 399 GIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
G+ + ++Y T++S + + G EA + K+M+ G + Y
Sbjct: 463 GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 108/219 (49%)
Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
+Y +L Q + A ++ M P+++ ++ ++ AK R D +++F +M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKY 455
+ LGI + N V+ + A +M G D VT+ +LL GY +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 456 DEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
++ +F+Q+ PN++TY+TLI K A+++F + G + +VV Y+AL
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
+ LC+ G A LL +M K I PNV+T+ ++IDAF
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 107/267 (40%), Gaps = 51/267 (19%)
Query: 419 RFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYS 478
+F +AL + M S + + LL K +YD V +FEQM+ + P L T +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 479 TLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE 538
++ A + + G + D+V +++L++ C +E A++L D++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 539 GIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTD 598
G +PNVVTY ++I ++ R
Sbjct: 183 GFKPNVVTYTTLIRCLCKN--------------------------------------RHL 204
Query: 599 NQIIKVFGQLVAEKAGQGKKENRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAI 651
N +++F Q+ + LC +G + + M K +I+PNV+TF+A+
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264
Query: 652 LNACSRCNSFEDASMLLEELRLFDNQV 678
++A F L+E L++ +
Sbjct: 265 IDA------FVKVGKLMEAKELYNVMI 285
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 33/148 (22%)
Query: 622 CRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV 681
CR C LG KM KL +P++VTF+++LN N EDA + LFD Q+ G
Sbjct: 135 CRAS--CFLG---KMMKLGFEPDLVTFTSLLNGYCHWNRIEDA------IALFD-QILG- 181
Query: 682 AHGLLMGYRDNIWV---------------QALSLFDEVKLMDSSTASAFYNALTDMLWHF 726
MG++ N+ A+ LF+++ S YNAL L
Sbjct: 182 -----MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEI 236
Query: 727 GQKRGAQLVVLEGKRRQVWENVWSESCL 754
G+ A ++ + +R++ NV + + L
Sbjct: 237 GRWGDAAWLLRDMMKRRIEPNVITFTAL 264
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/501 (27%), Positives = 237/501 (47%), Gaps = 47/501 (9%)
Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
+A N+F L+ T++ F ++ A+ A+S+ M ++ PN V Y +I
Sbjct: 200 VAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLI 259
Query: 271 DACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS-LLAVCSRGGLWEAARNLFNEMVHRG 329
+ K +++ ++M G PD TFN +L +C + EAA+ + N M+ RG
Sbjct: 260 HSLSKCN-RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAK-MVNRMLIRG 317
Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
D TY L++ +CK ++D A ++ +P P +V ++T+I G+ GRLDDA
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAK 373
Query: 390 NMFSEM-KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
+ S+M GI D +YN+++ Y K G AL V +M + G + + +Y L+ G
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
+ K GK DE + +M AD + PN + ++ LI + K EA++IFRE + G K D
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR------------ 556
V +++LI LC+ ++ A+ LL +M EG+ N VTYN++I+AF R
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 557 ------SATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQII--KVFGQL 608
S E T + + + L + E ++ + +D I+ +
Sbjct: 554 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Query: 609 VAEKAGQGKKENRCRQEI------------LCILG-------VFQKMHKLKIKPNVVTFS 649
+ E+A + +KE R LC G +F+K+ I P+ VTF+
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Query: 650 AILNACSRCNSFEDASMLLEE 670
+++ + DA +LL+E
Sbjct: 674 TLMSWLCKGGFVYDACLLLDE 694
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 191/350 (54%), Gaps = 6/350 (1%)
Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM-KRYNLKP 261
L ++G+VD AK++F + F+ LI + G +A +V + M Y + P
Sbjct: 332 LCKIGRVDAAKDLFYRIPKP----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 262 NLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
++ TYN++I K G+ +E+ DM G +P+ ++ L+ + G + A N+
Sbjct: 388 DVCTYNSLIYGYWKEGL-VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
NEM G+ + +N L+ A CK ++ A EI EMP K P+V T++++I G +
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
+ AL + +M G+ + V+YNT+++ + + G +EA + EM G D +T
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 566
Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
YN+L+ G + G+ D+ R +FE+M D +P+ ++ + LI+ + G+ +EA++ +E
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 551
G D+V +++LI+ LC+ G +E +++ ++ EGI P+ VT+N+++
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 207 GKVDLAKNIFETALNE-GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVT 265
G++D AK + + G V +++LI Y + G A+ V + M+ KPN+ +
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 266 YNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFN 323
Y ++D C G +D + ++M +G++P+ + FN L+ A C + EA +F
Sbjct: 427 YTILVDGFCKLGKID--EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE-IFR 483
Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
EM +G D++T+N+L+ +C+ ++ A ++ +M ++ + N VTY+T+I+ + + G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
+ +A + +EM F G LD ++YN+++ + G ++A + ++M G ++ N
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
L+ G + G +E ++M +P+++T+++LI+ + G ++ + +FR+ +
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
G+ D V ++ L+ LCK G V A LLDE ++G PN T++ ++ +
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 159 bits (403), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 182/360 (50%), Gaps = 6/360 (1%)
Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
L + +++ A + L G+ + L++ + G A +F + KP
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPE 352
Query: 263 LVTYNAVIDACGKGGVDFKHVVEIFDDMLRN-GVQPDRITFNSLLAVCSRGGLWEAARNL 321
+V +N +I G + DM+ + G+ PD T+NSL+ + GL A +
Sbjct: 353 IVIFNTLIHGFVTHG-RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
++M ++G ++++Y L+D CK ++D A+ ++ EM A + PN V ++ +I + K
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
R+ +A+ +F EM G D ++N+++S ++ + AL + ++M S G+ + VT
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
YN L+ + ++G+ E R++ +M + +TY++LI + G +A +F +
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
+ G + + LI+ LC++G+VE AV EM G P++VT+NS+I+ R+ E
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 167/318 (52%), Gaps = 11/318 (3%)
Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
G V LA + N+G VY+++ L+ + + G EA +V N M LKPN V +
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCS----RGGLWEAARNL 321
N +I A K VEIF +M R G +PD TFNSL++ +C + LW L
Sbjct: 463 NCLISAFCKEH-RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW-----L 516
Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
+M+ G+ + TYNTL++A + ++ A +++ EM + + +TY+++I G +
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCR 576
Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
AG +D A ++F +M G +S N +++ + G EEA+ KEM G D VT
Sbjct: 577 AGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 636
Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
+N+L+ G + G+ ++ MF +++A+ + P+ +T++TL+ KGG +A + E
Sbjct: 637 FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGI 696
Query: 502 QAGLKADVVLYSALIDAL 519
+ G + +S L+ ++
Sbjct: 697 EDGFVPNHRTWSILLQSI 714
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 173/376 (46%), Gaps = 42/376 (11%)
Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI---DACG 274
T GY ++ + LI G +G + + MK + + +++ D G
Sbjct: 101 TGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAG 160
Query: 275 KGGVDFKHVVEIFDDMLRN--GVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQ 332
G + ++E +RN +P ++N +L + G + A N+F +M+ R I
Sbjct: 161 FPGQTTRLMLE-----MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP 215
Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
+FT+ ++ A C ++D A ++ +M PN V Y T+I +K R+++AL +
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275
Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
EM +G D ++N V+ K R EA + M G D +TY L+ G K
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335
Query: 453 GKYDEVRRMFEQMK---------------------------ADCVS-----PNLLTYSTL 480
G+ D + +F ++ +D V+ P++ TY++L
Sbjct: 336 GRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 481 IDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
I Y K GL A+++ + + G K +V Y+ L+D CK G ++ A ++L+EM+ +G+
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Query: 541 RPNVVTYNSIIDAFGR 556
+PN V +N +I AF +
Sbjct: 456 KPNTVGFNCLISAFCK 471
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 157/332 (47%), Gaps = 43/332 (12%)
Query: 170 GEWSKAIQCFAFAVKREER-KNDQGKLASAMISILG--RLGKVDLAKNIFETALNEGYGN 226
G W + + A V + R K + + S I + G +LGK+D A N+ +G
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD-FKHVVE 285
F+ LISA+ + EA+ +F M R KP++ T+N++I G VD KH +
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS--GLCEVDEIKHALW 515
Query: 286 IFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAIC 345
+ DM+ GV + +T+N+L+ R G + AR L NEMV +G D TYN+L+ +C
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 346 KGAQMDLA-----------------------------------FEIMAEMPAKNISPNVV 370
+ ++D A E EM + +P++V
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
T++++I+G +AGR++D L MF +++ GI D V++NT++S K G +A L+ E
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEG 695
Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMF 462
G + T++ LL Q D RR F
Sbjct: 696 IEDGFVPNHRTWSILLQSIIPQETLD--RRRF 725
>sp|Q9SSF9|PP123_ARATH Pentatricopeptide repeat-containing protein At1g74750
OS=Arabidopsis thaliana GN=At1g74750 PE=2 SV=1
Length = 855
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/537 (25%), Positives = 244/537 (45%), Gaps = 62/537 (11%)
Query: 329 GIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDA 388
G D TY T++ + + Q +++ EM PN VTY+ +I Y +A L +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 389 LNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGG 448
+N+F++M+ G DRV+Y T++ I+AK G + A+ + + M+ +G+ D TY+ ++
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 449 YGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKAD 508
GK G R+F +M +PNL+T++ +I +++K Y+ A++++R+ + AG + D
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 509 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVE 568
V YS +++ L G +E A + EM ++ P+ Y ++D +G++
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNV-------- 585
Query: 569 RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILC 628
D Q A L A ++ T N ++ F L + +
Sbjct: 586 -DKAWQWYQAMLQA-------GLRPNVPTCNSLLSTF--LRVHRMSEA------------ 623
Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGV----AHG 684
+ Q M L + P++ T++ +L+ C+ S D F Q+ V AH
Sbjct: 624 -YNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMG--------FCGQLMAVSGHPAHM 674
Query: 685 LLM----------GYRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQL 734
L+ RD++ + D + D + +A+ D L G K A
Sbjct: 675 FLLKMPPAGPDGQKVRDHV----SNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGS 730
Query: 735 VVLEGKRRQVW-----ENVWSESCLDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLL 789
V + V+ E +S ++LH+MS G A + L + + P +
Sbjct: 731 VWEVAAGKNVYPDALREKSYSYWLINLHVMSEGTAVIALSRTLAWFRKQMLVSGDCPSRI 790
Query: 790 SILTGWGKHSKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRES 846
I+TGWG+ S+V G +R+AVE LL PF+ N N G F+ +G + +WL ES
Sbjct: 791 DIVTGWGRRSRVTGTSMVRQAVEELLNIFNFPFFTENGNSGCFVGSGEPLKNWLLES 847
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 163/306 (53%), Gaps = 2/306 (0%)
Query: 247 AISVFNSMKRY-NLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSL 305
A+ F +KR K + TY ++ G+ F + ++ D+M+R+G +P+ +T+N L
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK-QFGEINKLLDEMVRDGCKPNTVTYNRL 400
Query: 306 LAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNI 365
+ R + A N+FN+M G + D TY TL+D K +D+A ++ M +
Sbjct: 401 IHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGL 460
Query: 366 SPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALL 425
SP+ TYS +I+ KAG L A +F EM G + V++N +++++AK +E AL
Sbjct: 461 SPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALK 520
Query: 426 VCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYS 485
+ ++M+++G + D VTY+ ++ G G +E +F +M+ P+ Y L+D++
Sbjct: 521 LYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWG 580
Query: 486 KGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 545
K G +A Q ++ QAGL+ +V ++L+ + + A +LL M G+ P++
Sbjct: 581 KAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQ 640
Query: 546 TYNSII 551
TY ++
Sbjct: 641 TYTLLL 646
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 167/357 (46%), Gaps = 23/357 (6%)
Query: 125 AEEALHHVTAFARDDVSLGDILKKFEFKLCGADDYTFLLRELGNRGEWSKAIQCFAFAVK 184
AEEALH+ F D +LK+ D+Y LG F + +K
Sbjct: 313 AEEALHNF-GFRMDAYQANQVLKQM-------DNYA---NALG-----------FFYWLK 350
Query: 185 REERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYC 244
R+ G + M+ LGR + + + + +G ++ LI +YGR+ Y
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
+EA++VFN M+ +P+ VTY +ID K G ++++ M G+ PD T++
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGF-LDIAMDMYQRMQEAGLSPDTFTYSV 469
Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
++ + G AA LF EMV +G ++ T+N ++ K + A ++ +M
Sbjct: 470 IINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAG 529
Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
P+ VTYS +++ G L++A +F+EM+ D Y ++ ++ K G ++A
Sbjct: 530 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAW 589
Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLI 481
+ M +G+R + T N+LL + + + E + + M A + P+L TY+ L+
Sbjct: 590 QWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 130/299 (43%), Gaps = 1/299 (0%)
Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
+I I + G +D+A ++++ G + +S +I+ G++G+ A +F M
Sbjct: 435 LIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG 494
Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
PNLVT+N +I K +++ ++++ DM G QPD++T++ ++ V G E A
Sbjct: 495 CTPNLVTFNIMIALHAKA-RNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEA 553
Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDG 378
+F EM + D Y L+D K +D A++ M + PNV T ++++
Sbjct: 554 EGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLST 613
Query: 379 YAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKD 438
+ + R+ +A N+ M LG+ +Y +LS + + M SG
Sbjct: 614 FLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSGHPAH 673
Query: 439 AVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
G Q D V + M ++ ++D K GL +EA ++
Sbjct: 674 MFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVW 732
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 210/396 (53%), Gaps = 13/396 (3%)
Query: 170 GEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVY 229
G AIQCF + R+ R + + ++ + +L + L+ G+ VY
Sbjct: 184 GFIPDAIQCFRLS--RKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVY 241
Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVD----FKHVV 284
F+ L++ + + G +A VF+ + + +L+P +V++N +I+ C G +D KH +
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 285 EIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAI 344
E ++ +PD T+++L+ + + A LF+EM RG+ + + TL+
Sbjct: 302 E------KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Query: 345 CKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDR 404
+ ++DL E +M +K + P++V Y+T+++G+ K G L A N+ M G+ D+
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 405 VSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQ 464
++Y T++ + + G E AL + KEM+ +GI D V ++AL+ G K+G+ + R +
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 465 MKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGL 524
M + P+ +TY+ ++D + K G + ++ +E + G VV Y+ L++ LCK G
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535
Query: 525 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATT 560
+++A LLD M G+ P+ +TYN++++ R A +
Sbjct: 536 MKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANS 571
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 160/311 (51%), Gaps = 10/311 (3%)
Query: 368 NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVC 427
NV ++ +++ + K G + DA +F E+ + VS+NT+++ Y K+G +E +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 428 KEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKG 487
+ME S R D TY+AL+ K+ K D +F++M + PN + ++TLI +S+
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 488 GLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTY 547
G + +++ GL+ D+VLY+ L++ CKNG + +A +++D M + G+RP+ +TY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 548 NSIIDAFGRSATTECTV------DDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQI 601
++ID F R E + D +L + SA + MC + V +A R ++
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE--GRVIDAERALREM 476
Query: 602 IKVFGQLVAEKAGQGKKENRCRQ-EILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
++ G + + C++ + + ++M P+VVT++ +LN +
Sbjct: 477 LRA-GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535
Query: 661 FEDASMLLEEL 671
++A MLL+ +
Sbjct: 536 MKNADMLLDAM 546
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 187/352 (53%), Gaps = 6/352 (1%)
Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
L + G +DLA N+ V F+ +I + + + + A+ +F M+ ++PN
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
+VTYN++I+ C G + + +ML + P+ +TFN+L+ + G A L
Sbjct: 293 VVTYNSLINCLCNYG--RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
EM+ R ID D TYN L++ C ++D A ++ M +K+ PN+ TY+T+I+G+ K
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
R++D + +F EM G+ + V+Y T++ + + G + A +V K+M S+ + D +T
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
Y+ LL G GK D +F+ ++ + N+ Y+T+I+ K G EA +F
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL- 529
Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 553
+K DVV Y+ +I LC L++ A L +M ++G PN TYN++I A
Sbjct: 530 --SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 187/357 (52%), Gaps = 3/357 (0%)
Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
++S + ++ K +L ++ E G + +Y +S I+ + R A++V M +
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 259 LKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEA 317
+P++VT +++++ C + V + D M+ G +PD TF +L+
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRI--SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 318 ARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMID 377
A L ++MV RG D+ TY T+++ +CK +DLA ++ +M A I NVV ++T+ID
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 378 GYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRK 437
K ++ A+++F+EM+ GI + V+YN++++ GR+ +A + M I
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 438 DAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIF 497
+ VT+NAL+ + K+GK E ++ E+M + P+ +TY+ LI+ + EA Q+F
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 498 REFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
+ ++ Y+ LI+ CK VE V L EM++ G+ N VTY +II F
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 192/362 (53%), Gaps = 15/362 (4%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
S I+ R ++ LA + + GY + S+L++ Y S +A+++ + M
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKH-----VVEIFDDMLRNGVQPDRITFNSLL-AVCS 310
KP+ T+ +I F H V + D M++ G QPD +T+ +++ +C
Sbjct: 182 MGYKPDTFTFTTLIHGL------FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 311 RGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVV 370
RG + + A NL N+M I ++ +NT++D++CK +++A ++ EM K I PNVV
Sbjct: 236 RGDI-DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 371 TYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM 430
TY+++I+ GR DA + S M I + V++N ++ + K G+ EA + +EM
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA-DCVSPNLLTYSTLIDVYSKGGL 489
I D +TYN L+ G+ + DE ++MF+ M + DC+ PN+ TY+TLI+ + K
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL-PNIQTYNTLINGFCKCKR 413
Query: 490 YKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNS 549
++ +++FRE Q GL + V Y+ +I + G +SA + +M + +++TY+
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 550 II 551
++
Sbjct: 474 LL 475
Score = 162 bits (411), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 222/460 (48%), Gaps = 17/460 (3%)
Query: 203 LGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPN 262
L + KVD A ++F + ++ F+ L+SA + + IS+ M+ + +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 263 LVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNL 321
L TY+ I+ C + + + + M++ G +PD +T +SLL A L
Sbjct: 118 LYTYSIFINCFCRRSQLSL--ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 322 FNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAK 381
++MV G D FT+ TL+ + + A ++ +M + P++VTY T+++G K
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 382 AGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVT 441
G +D ALN+ ++M+ I + V +NT++ K E A+ + EME+ GIR + VT
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 442 YNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFK 501
YN+L+ G++ + R+ M ++PN++T++ LID + K G EA ++ E
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 502 QAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTE 561
Q + D + Y+ LI+ C + ++ A + M + PN+ TYN++I+ F + E
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 562 CTVDDVE--RDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKE 619
D VE R++ ++ N + + +AG D+ + VF Q+V+ +
Sbjct: 416 ---DGVELFREMSQRGLVGN-TVTYTTIIQGFFQAGDCDSAQM-VFKQMVSNRVPTDIMT 470
Query: 620 NRCRQEILCILG-------VFQKMHKLKIKPNVVTFSAIL 652
LC G +F+ + K +++ N+ ++ ++
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 143/291 (49%), Gaps = 12/291 (4%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
Y L+ L N G WS A + + + E++ N +A+I + GK+ A+ + E
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNML--EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGV 278
+ ++ LI+ + EA +F M + PN+ TYN +I+ G
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN----GFC 409
Query: 279 DFKHV---VEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIF 335
K V VE+F +M + G+ + +T+ +++ + G ++A+ +F +MV + DI
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 336 TYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEM 395
TY+ LL +C ++D A I + + N+ Y+TMI+G KAG++ +A ++F
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS- 528
Query: 396 KFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALL 446
L I D V+YNT++S +EA + ++M+ G ++ TYN L+
Sbjct: 529 --LSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 8/189 (4%)
Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
G D A+ +F+ ++ + +S L+ G A+ +F +++ ++ N+ Y
Sbjct: 447 GDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIY 506
Query: 267 NAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEM 325
N +I+ K G V E +D ++PD +T+N++++ +CS+ L E A +LF +M
Sbjct: 507 NTMIEGMCKAG----KVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQE-ADDLFRKM 561
Query: 326 VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRL 385
G + TYNTL+ A + + E++ EM + + T S ++ GRL
Sbjct: 562 KEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRL 620
Query: 386 DDA-LNMFS 393
D + LNM S
Sbjct: 621 DKSFLNMLS 629
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 250/489 (51%), Gaps = 23/489 (4%)
Query: 186 EERKNDQGKLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQ 245
+E K+ S ++ L R K++ A T+ + G +V +F++++S Y + G+
Sbjct: 222 KEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVD 281
Query: 246 EAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
A S F ++ + L P++ ++N +I+ C G + +E+ DM ++GV+PD +T+N
Sbjct: 282 MAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI--AEALELASDMNKHGVEPDSVTYNI 339
Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
L G+ A + +M+ +G+ D+ TY LL C+ +D+ ++ +M ++
Sbjct: 340 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 399
Query: 365 ISPN-VVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
N ++ S M+ G K GR+D+AL++F++MK G+ D V+Y+ V+ KLG+F+ A
Sbjct: 400 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 459
Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
L + EM I ++ T+ ALL G ++G E R + + + + + +++ Y+ +ID
Sbjct: 460 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 519
Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
Y+K G +EA+++F+ + G+ V +++LI CK + A +LD + G+ P+
Sbjct: 520 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 579
Query: 544 VVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK 603
VV+Y +++DA+ T+ ++D++ R++ K + + S K + + +N
Sbjct: 580 VVSYTTLMDAYANCGNTK-SIDELRREM-KAEGIPPTNVTYSVIFKGLCRGWKHEN-CNH 636
Query: 604 VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFED 663
V + + EK QG ++ M I P+ +T++ I+ R
Sbjct: 637 VLRERIFEKCKQGLRD----------------MESEGIPPDQITYNTIIQYLCRVKHLSG 680
Query: 664 ASMLLEELR 672
A + LE ++
Sbjct: 681 AFVFLEIMK 689
Score = 152 bits (385), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 181/363 (49%), Gaps = 16/363 (4%)
Query: 205 RLGKVDLAKNIFETALNEGYG-NTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
+LG +D+ + + L+ G+ N++ S ++S ++G EA+S+FN MK L P+L
Sbjct: 381 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 440
Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLF 322
V Y+ VI K G F + ++D+M + P+ T +LL +C +G L EA R+L
Sbjct: 441 VAYSIVIHGLCKLG-KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA-RSLL 498
Query: 323 NEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKA 382
+ ++ G DI YN ++D K ++ A E+ + I+P+V T++++I GY K
Sbjct: 499 DSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKT 558
Query: 383 GRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTY 442
+ +A + +K G+ VSY T++ YA G + + +EM++ GI VTY
Sbjct: 559 QNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTY 618
Query: 443 NALLGGYGKQGKYDEV-----RRMFEQ-------MKADCVSPNLLTYSTLIDVYSKGGLY 490
+ + G + K++ R+FE+ M+++ + P+ +TY+T+I +
Sbjct: 619 SVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL 678
Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
A K L A Y+ LID+LC G + A S + + ++ + + Y ++
Sbjct: 679 SGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTL 738
Query: 551 IDA 553
I A
Sbjct: 739 IKA 741
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 163/361 (45%), Gaps = 15/361 (4%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
S +I L +LGK D+A +++ ++ AL+ + G EA S+ +S+
Sbjct: 444 SIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 503
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLW 315
++V YN VID K G + +E+F ++ G+ P TFNSL+ C +
Sbjct: 504 SGETLDIVLYNIVIDGYAKSGC-IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 562
Query: 316 EAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTM 375
EA R + + + G+ + +Y TL+DA E+ EM A+ I P VTYS +
Sbjct: 563 EA-RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 621
Query: 376 IDGYAKAGRLDDALNMFSE------------MKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
G + + ++ ++ E M+ GI D+++YNT++ ++ A
Sbjct: 622 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 681
Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
+ + M+S + + TYN L+ G + ++ VS + Y+TLI
Sbjct: 682 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 741
Query: 484 YSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
+ G + A+++F + G + YSA+I+ LC+ LV + M +GI P+
Sbjct: 742 HCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801
Query: 544 V 544
+
Sbjct: 802 L 802
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 156/357 (43%), Gaps = 40/357 (11%)
Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNA 444
+DD+L + +MK + + SYN+VL + + + + V KE++ K+ TY+
Sbjct: 182 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD---VYKEIKD----KNEHTYST 234
Query: 445 LLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAG 504
++ G +Q K ++ + + P+++++++++ Y K G A F + G
Sbjct: 235 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 294
Query: 505 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR----SATT 560
L V ++ LI+ LC G + A+ L +M K G+ P+ VTYN + F S
Sbjct: 295 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 354
Query: 561 ECTVDDVERDLGKQKESANLDAMCSQDD-----------KDVQEAGRTDNQIIKVFGQLV 609
E D +++ L + + +C Q KD+ G N II ++
Sbjct: 355 EVIRDMLDKGLSPDVITYTI-LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC-SVML 412
Query: 610 AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
+ G+ + L +F +M + P++V +S +++ + F+ A L +
Sbjct: 413 SGLCKTGRIDEA--------LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 464
Query: 670 EL---RLFDNQVYGVAHG-LLMGY-RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
E+ R+ N HG LL+G + + ++A SL D + + YN + D
Sbjct: 465 EMCDKRILPN---SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 518
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 194/387 (50%), Gaps = 41/387 (10%)
Query: 211 LAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVI 270
LA + + G+ + F++LI+ + +EA+S+ N M +KP++V Y +I
Sbjct: 125 LASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTII 184
Query: 271 DA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRG 329
D+ C G V++ + +FD M G++PD + + SL+ G W A +L M R
Sbjct: 185 DSLCKNGHVNY--ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK 242
Query: 330 IDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDAL 389
I D+ T+N L+DA K + A E+ EM +I+PN+ TY+++I+G+ G +D+A
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302
Query: 390 NMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGY 449
MF M+ G D V+Y ++++ + K + ++A+ + EM G+ + +TY L+ G+
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 450 GKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA---GLK 506
G+ GK + + +F M + V PN+ TY+ L+ G K+A+ IF + ++ G+
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA 422
Query: 507 ADVVLYSALIDALCKNGLVESAVSLLDEMTK----------------------------- 537
++ Y+ L+ LC NG +E A+ + ++M K
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Query: 538 ------EGIRPNVVTYNSIIDAFGRSA 558
+G++PNVVTY ++I R
Sbjct: 483 FCSLPSKGVKPNVVTYTTMISGLFREG 509
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 208/431 (48%), Gaps = 35/431 (8%)
Query: 245 QEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNS 304
EA+ +F M P+++ + +++ K F V+ + D + GV D T N
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMK-KFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKN 364
L+ + A + +M+ G + DI T+ +L++ C G +M+ A ++ +M
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 365 ISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424
I P+VV Y+T+ID K G ++ AL++F +M+ GI D V Y ++++ GR+ +A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 425 LVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVY 484
+ + M I+ D +T+NAL+ + K+GK+ + ++ +M ++PN+ TY++LI+ +
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 485 SKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNV 544
G EA Q+F + G DVV Y++LI+ CK V+ A+ + EM+++G+ N
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 545 VTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKV 604
+TY ++I FG+ K + + + V RT N ++
Sbjct: 353 ITYTTLIQGFGQVG----------------KPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 605 FGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLK---IKPNVVTFSAILNACSRCNSF 661
G+ KK L +F+ M K + + PN+ T++ +L+
Sbjct: 397 LCY-----NGKVKKA----------LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKL 441
Query: 662 EDASMLLEELR 672
E A M+ E++R
Sbjct: 442 EKALMVFEDMR 452
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 188/349 (53%), Gaps = 4/349 (1%)
Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
+ + +I L + G V+ A ++F+ N G V +++L++ SG ++A S+ M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
+ +KP+++T+NA+IDA K G F E++++M+R + P+ T+ SL+ G
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEG-KFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
+ AR +F M +G D+ Y +L++ CK ++D A +I EM K ++ N +TY+T
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEM---E 431
+I G+ + G+ + A +FS M G+ + +YN +L G+ ++AL++ ++M E
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 432 SSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
G+ + TYN LL G GK ++ +FE M+ + ++TY+ +I K G K
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477
Query: 492 EAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGI 540
A+ +F G+K +VV Y+ +I L + GL A L +M ++G+
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 191/419 (45%), Gaps = 47/419 (11%)
Query: 349 QMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYN 408
Q + A ++ M P+++ ++ +++ AK + D +N+ ++ +G+ D + N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 409 TVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKAD 468
+++ + + + A +M G D VT+ +L+ G+ + +E M QM
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 469 CVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESA 528
+ P+++ Y+T+ID K G A+ +F + + G++ DVV+Y++L++ LC +G A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 529 VSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDD 588
SLL MTK I+P+V+T+N++IDAF KE LDA +
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAF-------------------VKEGKFLDA--EELY 270
Query: 589 KDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTF 648
++ N I + L+ +G + RQ +F M P+VV +
Sbjct: 271 NEMIRMSIAPN--IFTYTSLINGFCMEGCVD-EARQ-------MFYLMETKGCFPDVVAY 320
Query: 649 SAILNACSRCNSFEDASMLLEELR---LFDNQVYGVAHGLLMGY----RDNIWVQALSLF 701
++++N +C +DA + E+ L N + L+ G+ + N+ A +F
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI--TYTTLIQGFGQVGKPNV---AQEVF 375
Query: 702 DEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQ---VWENVWSESCLDLH 757
+ YN L L + G+ + A ++ + ++R+ V N+W+ + L LH
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL-LH 433
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 158/317 (49%), Gaps = 8/317 (2%)
Query: 159 YTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFET 218
YT L+ L N G W A KR+ + + +A+I + GK A+ ++
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT--FNALIDAFVKEGKFLDAEELYNE 272
Query: 219 ALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGG 277
+ ++ +++LI+ + G EA +F M+ P++V Y ++I+ C
Sbjct: 273 MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK 332
Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
VD ++IF +M + G+ + IT+ +L+ + G A+ +F+ MV RG+ +I TY
Sbjct: 333 VD--DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY 390
Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKN---ISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
N LL +C ++ A I +M + ++PN+ TY+ ++ G G+L+ AL +F +
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
M+ + + ++Y ++ K G+ + A+ + + S G++ + VTY ++ G ++G
Sbjct: 451 MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGL 510
Query: 455 YDEVRRMFEQMKADCVS 471
E +F +MK D VS
Sbjct: 511 KHEAHVLFRKMKEDGVS 527
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 241/484 (49%), Gaps = 25/484 (5%)
Query: 195 LASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSM 254
+ + +I L L + AK + G + ++ LI + EA+ + +
Sbjct: 229 IYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDL 288
Query: 255 KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGL 314
+LKP++VTY ++ K +F+ +E+ D+ML P +SL+ + G
Sbjct: 289 AGKDLKPDVVTYCTLVYGLCKVQ-EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347
Query: 315 WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYST 374
E A NL +V G+ ++F YN L+D++CKG + A + M + PN VTYS
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 375 MIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSG 434
+ID + + G+LD AL+ EM G+ L YN++++ + K G A EM +
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 435 IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAM 494
+ VTY +L+GGY +GK ++ R++ +M ++P++ T++TL+ + GL ++A+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 495 QIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
++F E + +K + V Y+ +I+ C+ G + A L EMT++GI P+ +Y +I
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 555 ---GRSATTECTVDDVER---DLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIK----- 603
G+++ + VD + + +L + + L C + ++EA ++++
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREG--KLEEALSVCQEMVQRGVDL 645
Query: 604 ---VFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNS 660
+G L+ G K ++R G+ ++MH +KP+ V ++++++A S+
Sbjct: 646 DLVCYGVLI---DGSLKHKDR-----KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Query: 661 FEDA 664
F++A
Sbjct: 698 FKEA 701
Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/516 (25%), Positives = 232/516 (44%), Gaps = 56/516 (10%)
Query: 196 ASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMK 255
S+++ L + GK++ A N+ + ++ G ++ ++ALI + + EA +F+ M
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 256 RYNLKPNLVTYNAVIDA-CGKGGVD--FKHVVEIFD------------------------ 288
+ L+PN VTY+ +ID C +G +D + E+ D
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 289 -------DMLRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTL 340
+M+ ++P +T+ SL+ CS+G + +A R L++EM +GI I+T+ TL
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR-LYHEMTGKGIAPSIYTFTTL 513
Query: 341 LDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGI 400
L + + + A ++ EM N+ PN VTY+ MI+GY + G + A EM GI
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 401 GLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRR 460
D SY ++ G+ EA + + + + Y LL G+ ++GK +E
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633
Query: 461 MFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALC 520
+ ++M V +L+ Y LID K K + +E GLK D V+Y+++IDA
Sbjct: 634 VCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKS 693
Query: 521 KNGLVESAVSLLDEMTKEGIRPNVVTYNSIID-----AFGRSATTECTVDDVERDLGKQK 575
K G + A + D M EG PN VTY ++I+ F A C+ + Q
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQV 753
Query: 576 ESANLDAMCSQDDKDVQEAGRTDNQIIK-------VFGQLVAEKAGQGKKENRCRQEILC 628
+ ++ + D+Q+A N I+K + L+ QG+ E
Sbjct: 754 TYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASE----- 808
Query: 629 ILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDA 664
+ +M + P+ +T++ ++N R N + A
Sbjct: 809 ---LITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Score = 170 bits (431), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 183/408 (44%), Gaps = 73/408 (17%)
Query: 207 GKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTY 266
GK++ A ++ +G ++Y F+ L+S R+G ++A+ +FN M +N+KPN VTY
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 267 NAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPD--------------------------- 298
N +I+ C +G D E +M G+ PD
Sbjct: 546 NVMIEGYCEEG--DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 299 --------RITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQM 350
I + LL R G E A ++ EMV RG+D D+ Y L+D K
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 351 DLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTV 410
L F ++ EM + + P+ V Y++MID +K G +A ++ M G + V+Y V
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 411 LSIYAKLGRFEEALLVCKEMES-----------------------------------SGI 435
++ K G EA ++C +M+ G+
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL 783
Query: 436 RKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQ 495
+ TYN L+ G+ +QG+ +E + +M D VSP+ +TY+T+I+ + K+A++
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843
Query: 496 IFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 543
++ + G++ D V Y+ LI C G + A L +EM ++G+ PN
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 189/442 (42%), Gaps = 68/442 (15%)
Query: 231 FSALISAYGRSGYCQEAISVFNSM-KRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDD 289
F LI Y RS + + VF M + +L P + T +A++ G V F+H
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALL----HGLVKFRH------- 207
Query: 290 MLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQ 349
+ A LFN+MV GI D++ Y ++ ++C+
Sbjct: 208 -------------------------FGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 350 MDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNT 409
+ A E++A M A N+V Y+ +IDG K ++ +A+ + ++ + D V+Y T
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADC 469
++ K+ FE L + EM ++L+ G K+GK +E + +++
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 470 VSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAV 529
VSPNL Y+ LID KG + EA +F + GL+ + V YS LID C+ G +++A+
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 530 SLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDK 589
S L EM G++ +V YNS+I+ C D+ G E N
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLING-------HCKFGDISAAEGFMAEMIN---------- 465
Query: 590 DVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFS 649
+ + + L+ +GK R ++ +M I P++ TF+
Sbjct: 466 ------KKLEPTVVTYTSLMGGYCSKGKINKALR--------LYHEMTGKGIAPSIYTFT 511
Query: 650 AILNACSRCNSFEDASMLLEEL 671
+L+ R DA L E+
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEM 533
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 6/259 (2%)
Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
R GK++ A ++ + + G + + LI + + + M LKP+ V
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV 683
Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
Y ++IDA K G DFK I+D M+ G P+ +T+ +++ + G A L ++
Sbjct: 684 IYTSMIDAKSKTG-DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Query: 325 MVHRGIDQDIFTYNTLLDAICKG-AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
M + TY LD + KG M A E+ + K + N TY+ +I G+ + G
Sbjct: 743 MQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI-LKGLLANTATYNMLIRGFCRQG 801
Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
R+++A + + M G+ D ++Y T+++ + ++A+ + M GIR D V YN
Sbjct: 802 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 444 ALLGGY---GKQGKYDEVR 459
L+ G G+ GK E+R
Sbjct: 862 TLIHGCCVAGEMGKATELR 880
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 235/471 (49%), Gaps = 26/471 (5%)
Query: 103 RFVSKMHFGRPKIAMSTRHSVVAEEALHHVTA---------------FARDDVSLGDILK 147
RFV ++ F P +H+ ++ A+ H+ R VS +I+
Sbjct: 97 RFVDQLGFHFPNF----KHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVN 152
Query: 148 KFE--FKLCGADDYTF--LLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISIL 203
+ F CG++D F L+R + +A + AF + R + +A+I L
Sbjct: 153 SLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHE--AFTLLRSKGFTVSIDACNALIGSL 210
Query: 204 GRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNL 263
R+G V+LA +++ G G VY + +++A + G ++ + + ++ + P++
Sbjct: 211 VRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDI 270
Query: 264 VTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFN 323
VTYN +I A G+ + E+ + M G P T+N+++ + G +E A+ +F
Sbjct: 271 VTYNTLISAYSSKGL-MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 329
Query: 324 EMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAG 383
EM+ G+ D TY +LL CK + ++ ++M ++++ P++V +S+M+ + ++G
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389
Query: 384 RLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYN 443
LD AL F+ +K G+ D V Y ++ Y + G A+ + EM G D VTYN
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 444 ALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQA 503
+L G K+ E ++F +M + P+ T + LID + K G + AM++F++ K+
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 504 GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
++ DVV Y+ L+D K G +++A + +M + I P ++Y+ +++A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Score = 177 bits (448), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 249/505 (49%), Gaps = 42/505 (8%)
Query: 208 KVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYN 267
K+ A F ++G+ ++ A +ALI + R G+ + A V+ + R + N+ T N
Sbjct: 180 KLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLN 239
Query: 268 AVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVH 327
+++A K G + V + GV PD +T+N+L++ S GL E A L N M
Sbjct: 240 IMVNALCKDG-KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 328 RGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDD 387
+G ++TYNT+++ +CK + + A E+ AEM +SP+ TY +++ K G + +
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 388 ALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLG 447
+FS+M+ + D V +++++S++ + G ++AL+ ++ +G+ D V Y L+
Sbjct: 359 TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ 418
Query: 448 GYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKA 507
GY ++G + +M + +++TY+T++ K + EA ++F E + L
Sbjct: 419 GYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP 478
Query: 508 DVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR----SATTECT 563
D + LID CK G +++A+ L +M ++ IR +VVTYN+++D FG+ E
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 564 VDDVERDLGKQKESANL--DAMCSQD-------------DKDVQEAGRTDNQIIKVFGQL 608
D V +++ S ++ +A+CS+ K+++ N +IK + +
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 609 VAEKAGQGKKENRCRQEIL--CI------------------LGVFQKMHKLK--IKPNVV 646
G+ E + + CI G+ +KM + + + P+V
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Query: 647 TFSAILNACSRCNSFEDASMLLEEL 671
T+++IL+ R N ++A ++L ++
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKM 683
Score = 167 bits (422), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 203/404 (50%), Gaps = 9/404 (2%)
Query: 155 GADDYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKN 214
G Y ++ L G++ +A + FA + R D S ++ + G V +
Sbjct: 304 GVYTYNTVINGLCKHGKYERAKEVFA-EMLRSGLSPDSTTYRSLLMEACKK-GDVVETEK 361
Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-C 273
+F + + FS+++S + RSG +A+ FNS+K L P+ V Y +I C
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQ 332
KG + + + ++ML+ G D +T+N++L +C R L EA + LFNEM R +
Sbjct: 422 RKGMISV--AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK-LFNEMTERALFP 478
Query: 333 DIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMF 392
D +T L+D CK + A E+ +M K I +VVTY+T++DG+ K G +D A ++
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 393 SEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQ 452
++M I +SY+ +++ G EA V EM S I+ + N+++ GY +
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 453 GKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFR--EFKQAGLKADVV 510
G + E+M ++ P+ ++Y+TLI + + +A + + E +Q GL DV
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Query: 511 LYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
Y++++ C+ ++ A +L +M + G+ P+ TY +I+ F
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 207/415 (49%), Gaps = 11/415 (2%)
Query: 197 SAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKR 256
+ +I+ L + GK + AK +F L G + +L+ + G E VF+ M+
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 368
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
++ P+LV +++++ + G + + F+ + G+ PD + + L+ R G+
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSG-NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
A NL NEM+ +G D+ TYNT+L +CK + A ++ EM + + P+ T + +I
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487
Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
DG+ K G L +A+ +F +MK I LD V+YNT+L + K+G + A + +M S I
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQI 496
++Y+ L+ +G E R++++M + + P ++ +++I Y + G +
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 497 FREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKE--GIRPNVVTYNSIIDAF 554
+ G D + Y+ LI + + A L+ +M +E G+ P+V TYNSI+ F
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667
Query: 555 GR-SATTECTV---DDVERDLGKQKESAN--LDAMCSQDDKDVQEAGRTDNQIIK 603
R + E V +ER + + + ++ SQD ++ EA R +++++
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQD--NLTEAFRIHDEMLQ 720
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 151/306 (49%), Gaps = 3/306 (0%)
Query: 205 RLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLV 264
R G + +A N+ L +G V ++ ++ + EA +FN M L P+
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Query: 265 TYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNE 324
T +ID K G + ++ +E+F M ++ D +T+N+LL + G + A+ ++ +
Sbjct: 482 TLTILIDGHCKLG-NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 325 MVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGR 384
MV + I +Y+ L++A+C + AF + EM +KNI P V+ ++MI GY ++G
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Query: 385 LDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS--GIRKDAVTY 442
D + +M G D +SYNT++ + + +A + K+ME G+ D TY
Sbjct: 601 ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660
Query: 443 NALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQ 502
N++L G+ +Q + E + +M V+P+ TY+ +I+ + EA +I E Q
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Query: 503 AGLKAD 508
G D
Sbjct: 721 RGFSPD 726
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 143/309 (46%), Gaps = 6/309 (1%)
Query: 257 YNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRIT--FNSLLAVCSRGGL 314
Y + +L +D G +FKH M+ V+ R++ + LL + R G+
Sbjct: 86 YRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGV 145
Query: 315 --WEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTY 372
E +L + + G + +F + L+ + ++ A E + +K + ++
Sbjct: 146 SRLEIVNSLDSTFSNCGSNDSVF--DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDAC 203
Query: 373 STMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMES 432
+ +I + G ++ A ++ E+ G+G++ + N +++ K G+ E+ +++
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 433 SGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKE 492
G+ D VTYN L+ Y +G +E + M SP + TY+T+I+ K G Y+
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 493 AMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 552
A ++F E ++GL D Y +L+ CK G V + +M + P++V ++S++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 553 AFGRSATTE 561
F RS +
Sbjct: 384 LFTRSGNLD 392
Score = 41.6 bits (96), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 37/199 (18%)
Query: 476 TYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 535
+ LI Y + +EA + F + G + +ALI +L + G VE A + E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 536 TKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAG 595
++ G+ NV T N +++A + E + SQ VQE G
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKME-----------------KVGTFLSQ----VQEKG 265
Query: 596 RTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIK---PNVVTFSAIL 652
+ I + L++ + +G E F+ M+ + K P V T++ ++
Sbjct: 266 VYPD--IVTYNTLISAYSSKGLMEE-----------AFELMNAMPGKGFSPGVYTYNTVI 312
Query: 653 NACSRCNSFEDASMLLEEL 671
N + +E A + E+
Sbjct: 313 NGLCKHGKYERAKEVFAEM 331
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 188/343 (54%), Gaps = 14/343 (4%)
Query: 227 TVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVE 285
V+ F+ +I+A ++G +A V MK Y PN+V+YN +ID C GG + +
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 286 -IFDDMLRNGVQPDRITFNSLLAVCSRGGLWE-----AARNLFNEMVHRGIDQDIFTYNT 339
+ +M+ N V P+ TFN L+ G W+ + +F EM+ + + ++ +YN+
Sbjct: 282 AVLKEMVENDVSPNLTTFNILI-----DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
L++ +C G ++ A + +M + + PN++TY+ +I+G+ K L +AL+MF +K G
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
YN ++ Y KLG+ ++ + +EME GI D TYN L+ G + G + +
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
++F+Q+ + + P+L+T+ L++ Y + G ++A + +E + GLK + Y+ ++
Sbjct: 457 KLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Query: 520 CKNGLVESAVSLLDEMTKE-GIRPNVVTYNSIIDAFGRSATTE 561
CK G +++A ++ +M KE +R NV +YN ++ + + E
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLE 558
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 221/444 (49%), Gaps = 48/444 (10%)
Query: 231 FSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDM 290
F A+ RSGY +S + KP ++ A++ V++ ++ +M
Sbjct: 169 FELGFEAFKRSGYYGYKLSALSC------KPLMI---ALLKENRSADVEY-----VYKEM 214
Query: 291 LRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK---G 347
+R +QP+ TFN ++ + G AR++ +M G ++ +YNTL+D CK
Sbjct: 215 IRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGN 274
Query: 348 AQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
+M A ++ EM ++SPN+ T++ +IDG+ K L ++ +F EM + + +SY
Sbjct: 275 GKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISY 334
Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKA 467
N++++ G+ EA+ + +M S+G++ + +TYNAL+ G+ K E MF +K
Sbjct: 335 NSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKG 394
Query: 468 DCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVES 527
P Y+ LID Y K G + + E ++ G+ DV Y+ LI LC+NG +E+
Sbjct: 395 QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454
Query: 528 AVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQD 587
A L D++T +G+ P++VT++ +++ + R G+ +++A L S+
Sbjct: 455 AKKLFDQLTSKGL-PDLVTFHILMEGYCRK--------------GESRKAAMLLKEMSK- 498
Query: 588 DKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVT 647
++ T N ++K + K G K R ++ +K +L++ NV +
Sbjct: 499 -MGLKPRHLTYNIVMKGYC-----KEGNLKAATNMRTQM-------EKERRLRM--NVAS 543
Query: 648 FSAILNACSRCNSFEDASMLLEEL 671
++ +L S+ EDA+MLL E+
Sbjct: 544 YNVLLQGYSQKGKLEDANMLLNEM 567
Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 138/267 (51%), Gaps = 3/267 (1%)
Query: 215 IFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACG 274
+F+ L++ V ++++LI+ G EAIS+ + M ++PNL+TYNA+I+
Sbjct: 318 VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC 377
Query: 275 KGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDI 334
K + K +++F + G P +N L+ + G + L EM GI D+
Sbjct: 378 KNDM-LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
TYN L+ +C+ ++ A ++ ++ +K + P++VT+ +++GY + G A + E
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESS-GIRKDAVTYNALLGGYGKQG 453
M +G+ ++YN V+ Y K G + A + +ME +R + +YN LL GY ++G
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTL 480
K ++ + +M + PN +TY +
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 152/365 (41%), Gaps = 73/365 (20%)
Query: 364 NISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEA 423
N+ N + ++ YA R + F + G L +S ++ K R +
Sbjct: 148 NVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADV 207
Query: 424 LLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDV 483
V KEM I+ + T+N ++ K GK ++ R + E MK SPN+++Y+TLID
Sbjct: 208 EYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDG 267
Query: 484 YSK----GGLYKE----------------------------------AMQIFREFKQAGL 505
Y K G +YK +M++F+E +
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV 327
Query: 506 KADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVD 565
K +V+ Y++LI+ LC G + A+S+ D+M G++PN++TYN++I+ F ++
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKN-------- 379
Query: 566 DVERDLGKQKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQE 625
D+ K+ LD S + R N +I + +L G KE R+
Sbjct: 380 ----DMLKEA----LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 626 I-------------LCILGVFQKMHKL------KIKPNVVTFSAILNACSRCNSFEDASM 666
I LC G + KL K P++VTF ++ R A+M
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAM 491
Query: 667 LLEEL 671
LL+E+
Sbjct: 492 LLKEM 496
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/465 (20%), Positives = 184/465 (39%), Gaps = 99/465 (21%)
Query: 321 LFNEMVHRGIDQDIFT--YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYS---TM 375
LF +++ +D D+ Y+ L+ ++L F+++ + N YS +
Sbjct: 70 LFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLA------NAKRYSKIRSF 123
Query: 376 IDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLS-----IYAKLGRFEEALLVCKEM 430
+DG+ + G ++F + D V N++++ YA RFE K
Sbjct: 124 LDGFVRNGSDHQVHSIFHAISMC----DNVCVNSIIADMLVLAYANNSRFELGFEAFKRS 179
Query: 431 ESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLY 490
G + A++ L+ K+ + +V ++++M + PN+ T++
Sbjct: 180 GYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFN------------ 227
Query: 491 KEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 550
+I+ALCK G + A ++++M G PNVV+YN++
Sbjct: 228 -----------------------VVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTL 264
Query: 551 IDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQ-DDKDVQEAGRTDNQIIKVFGQLV 609
ID + + LG + DA+ + + DV T N +I F
Sbjct: 265 IDGYCK--------------LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFW--- 307
Query: 610 AEKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLE 669
K +N + + VF++M +KPNV+++++++N CN + E
Sbjct: 308 -------KDDN-----LPGSMKVFKEMLDQDVKPNVISYNSLINGL--CN----GGKISE 349
Query: 670 ELRLFDNQVYGVAHGLLMGY--------RDNIWVQALSLFDEVKLMDSSTASAFYNALTD 721
+ + D V L+ Y ++++ +AL +F VK + + YN L D
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLID 409
Query: 722 MLWHFGQKRGAQLVVLEGKRRQVWENVWSESCLDLHLMSSGAARA 766
G+ + E +R + +V + +CL L +G A
Sbjct: 410 AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 99/196 (50%), Gaps = 5/196 (2%)
Query: 194 KLASAMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNS 253
++ + +I +LGK+D + E EG V ++ LI+ R+G + A +F+
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Query: 254 MKRYNLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRG 312
+ L P+LVT++ +++ C KG + + + +M + G++P +T+N ++ +
Sbjct: 462 LTSKGL-PDLVTFHILMEGYCRKG--ESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKE 518
Query: 313 GLWEAARNLFNEM-VHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVT 371
G +AA N+ +M R + ++ +YN LL + +++ A ++ EM K + PN +T
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Query: 372 YSTMIDGYAKAGRLDD 387
Y + + G + D
Sbjct: 579 YEIVKEEMVDQGFVPD 594
>sp|Q9FLD8|PP408_ARATH Pentatricopeptide repeat-containing protein At5g39980,
chloroplastic OS=Arabidopsis thaliana GN=At5g39980 PE=2
SV=1
Length = 678
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/543 (24%), Positives = 256/543 (47%), Gaps = 43/543 (7%)
Query: 161 FLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLA-SAMISILGRLGKVDLAKNIFETA 219
F++ L +W +++ + EE K A + ++ + R + D+A +F+
Sbjct: 124 FMVSLLSRENDWQRSLALLDWV--HEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEM 181
Query: 220 LNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVD 279
Y +S LI+++G+ G A+S M++ + +LV Y+ +I+ + D
Sbjct: 182 RQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE-LSRRLCD 240
Query: 280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNT 339
+ + IF + R+G+ PD + +NS++ V + L+ AR L EM G+ + +Y+T
Sbjct: 241 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYST 300
Query: 340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLG 399
LL + + A + AEM N + ++ T + MID Y + + +A +F ++ +
Sbjct: 301 LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD 360
Query: 400 IGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVR 459
I + VSYNT+L +Y + F EA+ + + M+ I ++ VTYN ++ YGK ++++
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 460 RMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDAL 519
+ ++M++ + PN +TYST+I ++ K G A +F++ + +G++ D VLY +I A
Sbjct: 421 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 480
Query: 520 CKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESAN 579
+ GL+ A LL E+ P+ + + I ++ TE +
Sbjct: 481 ERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTE------------EATWVF 524
Query: 580 LDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQKMHKL 639
A S + KD I VFG ++ + Q + ++ VF+KM
Sbjct: 525 RQAFESGEVKD-----------ISVFGCMINLYSRN--------QRYVNVIEVFEKMRTA 565
Query: 640 KIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNQVYGVAHGLLMGYRDNIWV 695
P+ + +LNA + FE A + E++ +F ++V+ L +D V
Sbjct: 566 GYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMV 625
Query: 696 QAL 698
++L
Sbjct: 626 ESL 628
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 206/416 (49%), Gaps = 38/416 (9%)
Query: 299 RITFNSLLAVCSRGGLWEAARNLFNEMVHR--GIDQDIFTYNTLLDAICKGAQMDLAFEI 356
+++ ++++ SR W+ + L + VH +F YN +L + + Q D+A +
Sbjct: 119 QLSIRFMVSLLSRENDWQRSLALLD-WVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGL 177
Query: 357 MAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAK 416
EM + ++P+ TYST+I + K G D AL+ +M+ + D V Y+ ++ + +
Sbjct: 178 FDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRR 237
Query: 417 LGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLT 476
L + +A+ + ++ SGI D V YN+++ YGK + E R + ++M V PN ++
Sbjct: 238 LCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVS 297
Query: 477 YSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT 536
YSTL+ VY + + EA+ +F E K+ D+ + +ID + +V+ A L +
Sbjct: 298 YSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLR 357
Query: 537 KEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQKESANLDAMCSQDDKDVQEAGR 596
K I PNVV+YN+I+ +G + G E+ +L + + KD+++
Sbjct: 358 KMDIEPNVVSYNTILRVYGEAEL-----------FG---EAIHLFRLMQR--KDIEQNVV 401
Query: 597 TDNQIIKVFGQLVA-EKAGQGKKENRCRQEILCILGVFQKMHKLKIKPNVVTFSAILNAC 655
T N +IK++G+ + EKA + Q+M I+PN +T+S I++
Sbjct: 402 TYNTMIKIYGKTMEHEKAT----------------NLVQEMQSRGIEPNAITYSTIISIW 445
Query: 656 SRCNSFEDASMLLEELRLFDNQVYGVAH-GLLMGY-RDNIWVQALSLFDEVKLMDS 709
+ + A+ L ++LR ++ V + +++ Y R + A L E+KL D+
Sbjct: 446 GKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDN 501
Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 157/342 (45%), Gaps = 40/342 (11%)
Query: 199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYN 258
MI + G+L V A +F + V +++ ++ YG + EAI +F M+R +
Sbjct: 336 MIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD 395
Query: 259 LKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318
++ N+VTYN +I GK ++ + + +M G++P+ IT+++++++ + G + A
Sbjct: 396 IEQNVVTYNTMIKIYGKT-MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRA 454
Query: 319 RNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISP----------- 367
LF ++ G++ D Y T++ A + M A ++ E+ + P
Sbjct: 455 ATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKA 514
Query: 368 --------------------NVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSY 407
++ + MI+ Y++ R + + +F +M+ G D
Sbjct: 515 GRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVI 574
Query: 408 NTVLSIYAKLGRFEEALLVCKEMESSG-IRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
VL+ Y K FE+A V +EM+ G + D V + +L Y + ++ V +F++++
Sbjct: 575 AMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFQRLE 633
Query: 467 ADCVSPNLLT---YSTLIDVYSKGGLYKEAMQIFREFKQAGL 505
+D PN+ + + + +Y + +A ++ ++ G+
Sbjct: 634 SD---PNVNSKELHLVVAALYERADKLNDASRVMNRMRERGI 672
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 183 bits (464), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 201/397 (50%), Gaps = 3/397 (0%)
Query: 158 DYTFLLRELGNRGEWSKAIQCFAFAVKREERKNDQGKLASAMISILGRLGKVDLAKNIFE 217
DY +LR + E AI F V + R S ++S + ++ K DL + E
Sbjct: 45 DYREVLRTGLSDIELDDAIG--LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGE 102
Query: 218 TALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGG 277
G + +Y ++ LI+ + R A+++ M + +P++VT N++++ G
Sbjct: 103 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGN 162
Query: 278 VDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTY 337
V + D M+ G +PD +TF +L+ A L + MV RG D+ TY
Sbjct: 163 -RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Query: 338 NTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKF 397
+++ +CK DLA ++ +M A I NVV YST+ID K DDALN+F+EM+
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281
Query: 398 LGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDE 457
G+ + ++Y++++S GR+ +A + +M I + VT++AL+ + K+GK +
Sbjct: 282 KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK 341
Query: 458 VRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALID 517
+++E+M + PN+ TYS+LI+ + EA Q+ + +VV Y+ LI+
Sbjct: 342 AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 401
Query: 518 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 554
CK V+ + L EM++ G+ N VTY ++I F
Sbjct: 402 GFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 181/343 (52%), Gaps = 15/343 (4%)
Query: 223 GYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH 282
GY + ++L++ + +A+++ + M KP+ VT+ +I F H
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGL------FLH 196
Query: 283 -----VVEIFDDMLRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFNEMVHRGIDQDIFT 336
V + D M++ G QPD +T+ +++ +C RG + A NL N+M I+ ++
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD-TDLALNLLNKMEAAKIEANVVI 255
Query: 337 YNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMK 396
Y+T++D++CK D A + EM K + PNV+TYS++I GR DA + S+M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 397 FLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYD 456
I + V+++ ++ + K G+ +A + +EM I + TY++L+ G+ +
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 457 EVRRMFEQM-KADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSAL 515
E ++M E M + DC+ PN++TY+TLI+ + K + M++FRE Q GL + V Y+ L
Sbjct: 376 EAKQMLELMIRKDCL-PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 516 IDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSA 558
I + ++A + +M G+ PN++TYN ++D ++
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 168/297 (56%), Gaps = 7/297 (2%)
Query: 230 AFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKH---VVEI 286
+ A+++ + G A+++ N M+ ++ N+V Y+ VID+ K ++H + +
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK----YRHEDDALNL 275
Query: 287 FDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICK 346
F +M GV+P+ IT++SL++ G W A L ++M+ R I+ ++ T++ L+DA K
Sbjct: 276 FTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVK 335
Query: 347 GAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVS 406
++ A ++ EM ++I PN+ TYS++I+G+ RL +A M M + V+
Sbjct: 336 KGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT 395
Query: 407 YNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMK 466
YNT+++ + K R ++ + + +EM G+ + VTY L+ G+ + D + +F+QM
Sbjct: 396 YNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 455
Query: 467 ADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNG 523
+ V PN+LTY+ L+D K G +AM +F +++ ++ D+ Y+ +I+ +CK G
Sbjct: 456 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 163/295 (55%), Gaps = 3/295 (1%)
Query: 198 AMISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRY 257
A+++ L + G DLA N+ V +S +I + + + +A+++F M+
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282
Query: 258 NLKPNLVTYNAVIDA-CGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWE 316
++PN++TY+++I C G + + DM+ + P+ +TF++L+ + G
Sbjct: 283 GVRPNVITYSSLISCLCNYG--RWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 317 AARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMI 376
A L+ EM+ R ID +IFTY++L++ C ++ A +++ M K+ PNVVTY+T+I
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 377 DGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIR 436
+G+ KA R+D + +F EM G+ + V+Y T++ + + + A +V K+M S G+
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Query: 437 KDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYK 491
+ +TYN LL G K GK + +FE ++ + P++ TY+ +I+ K G +K
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 219/478 (45%), Gaps = 40/478 (8%)
Query: 274 GKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQD 333
G ++ + +F M ++ P I F+ LL+ ++ ++ + +M GI +
Sbjct: 53 GLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHN 112
Query: 334 IFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFS 393
++TYN L++ C+ +++ LA ++ +M P++VT +++++G+ R+ DA+ +
Sbjct: 113 LYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVD 172
Query: 394 EMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453
+M +G D V++ T++ + EA+ + M G + D VTY A++ G K+G
Sbjct: 173 QMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG 232
Query: 454 KYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYS 513
D + +M+A + N++ YST+ID K +A+ +F E + G++ +V+ YS
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292
Query: 514 ALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGK 573
+LI LC G A LL +M + I PN+VT++++IDAF + + + ++ K
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL-VKAEKLYEEMIK 351
Query: 574 QKESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVF 633
+ N+ T + +I F L ++ G+ K+ +
Sbjct: 352 RSIDPNI---------------FTYSSLINGFCML--DRLGEAKQ-------------ML 381
Query: 634 QKMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELR---LFDNQV--YGVAHGLLMG 688
+ M + PNVVT++ ++N + + L E+ L N V + HG
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Query: 689 YRDNIWVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWE 746
RD A +F ++ + YN L D L G K +VV E +R E
Sbjct: 442 -RD--CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG-KLAKAMVVFEYLQRSTME 495
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 151/337 (44%), Gaps = 31/337 (9%)
Query: 335 FTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSE 394
+ Y +L ++D A + M P+++ +S ++ AK + D ++ +
Sbjct: 44 YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103
Query: 395 MKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGK 454
M+ LGI + +YN +++ + + R AL + +M G D VT N+LL G+ +
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 455 YDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSA 514
+ + +QM P+ +T++TLI EA+ + Q G + D+V Y A
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 515 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDLGKQ 574
+++ LCK G + A++LL++M I NVV Y+++ID+ + +
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY----------------R 267
Query: 575 KESANLDAMCSQDDKDVQEAGRTDNQIIKVFGQLVAEKAGQGKKENRCRQEILCILGVFQ 634
E L+ ++K V+ + + L++ G+ + R +
Sbjct: 268 HEDDALNLFTEMENKGVRPN-------VITYSSLISCLCNYGRWSDASR--------LLS 312
Query: 635 KMHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEEL 671
M + KI PN+VTFSA+++A + A L EE+
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 324,825,421
Number of Sequences: 539616
Number of extensions: 14009119
Number of successful extensions: 65566
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 196
Number of HSP's that attempted gapping in prelim test: 49339
Number of HSP's gapped (non-prelim): 4755
length of query: 877
length of database: 191,569,459
effective HSP length: 126
effective length of query: 751
effective length of database: 123,577,843
effective search space: 92806960093
effective search space used: 92806960093
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)