BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002821
(876 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C5U1|AHK3_ARATH Histidine kinase 3 OS=Arabidopsis thaliana GN=AHK3 PE=1 SV=1
Length = 1036
Score = 1248 bits (3228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/865 (72%), Positives = 710/865 (82%), Gaps = 18/865 (2%)
Query: 11 YTERTAFERPLTSGVAYAVRVLRSEREEFEKQQGWTIKRMDTFEHNPVHKD-------EP 63
YT+RT+FERPLTSGVAYA+RVL SEREEFE+QQGWTI++M + E NPVHKD EP
Sbjct: 175 YTDRTSFERPLTSGVAYAMRVLHSEREEFERQQGWTIRKMYSLEQNPVHKDDYDLEALEP 234
Query: 64 SPIEEEYAPVIFAQDTVSHVISLDMLSGKEDRENVLRARASGKGVLTAPFRLLKTNRLGV 123
SP++EEYAPVIFAQDTVSHV+SLDMLSGKEDRENVLRAR+SGKGVLTAPF L+KTNRLGV
Sbjct: 235 SPVQEEYAPVIFAQDTVSHVVSLDMLSGKEDRENVLRARSSGKGVLTAPFPLIKTNRLGV 294
Query: 124 ILTFAVYKRELPSNATPNERIEATDGYLGGIFDIESLVEKLLHQLASKQTIFVNVYDITN 183
ILTFAVYKR+LPSNATP ERIEAT+GYLGG+FDIESLVE LL QLASKQTI VNVYDITN
Sbjct: 295 ILTFAVYKRDLPSNATPKERIEATNGYLGGVFDIESLVENLLQQLASKQTILVNVYDITN 354
Query: 184 LSHPISMYGSNVSDDGLWLVSTLNFGDPFRKHEMRCRFKQKAPWPLLAISTSIGILVIAS 243
S PISMYG+NVS DGL VS L FGDP RKHEMRCRFKQK PWP+L++ TS GILVIA
Sbjct: 355 HSQPISMYGTNVSADGLERVSPLIFGDPLRKHEMRCRFKQKPPWPVLSMVTSFGILVIAL 414
Query: 244 LVGHIFQATVNRIAKVEEDYHGMMELKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLD 303
LV HI ATV+RI KVEED M +LKKKAEAADVAKSQFLATVSHEIRTPMNGVLGML
Sbjct: 415 LVAHIIHATVSRIHKVEEDCDKMKQLKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLH 474
Query: 304 MLMDTELDVTQQDYVRTAQASGKALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVL 363
MLMDTELDVTQQDYVRTAQASGKALVSLINEVLDQAK+ESGKLELE V F+LR ILDDVL
Sbjct: 475 MLMDTELDVTQQDYVRTAQASGKALVSLINEVLDQAKIESGKLELEEVRFDLRGILDDVL 534
Query: 364 SLFSGKSQDKGVELAVYISDRVPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLV 423
SLFS KSQ KGVELAVYISDRVP+ LIGDPGRFRQI+TNLMGNSIKFTEKGHIFVTV+LV
Sbjct: 535 SLFSSKSQQKGVELAVYISDRVPDMLIGDPGRFRQILTNLMGNSIKFTEKGHIFVTVHLV 594
Query: 424 EEVVDSIEVETELSSSKNTLSGYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVS 483
+E+ +SI+ ET SS ++TLSG PVADR SW+ FK F+ +G S F+ S D INLIVS
Sbjct: 595 DELFESIDGETA-SSPESTLSGLPVADRQRSWENFKAFSSNGHRS-FEPSPPD-INLIVS 651
Query: 484 VEDTGQGIPLEAQSRIFTPFMQVGPSISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNI 543
VEDTG GIP+EAQSRIFTPFMQVGPSISRTHGGTGIGLSISK LVG MKGEIGF S P +
Sbjct: 652 VEDTGVGIPVEAQSRIFTPFMQVGPSISRTHGGTGIGLSISKCLVGLMKGEIGFSSTPKV 711
Query: 544 GSTFTFTAVFGNGSSTSNEHNSQQMNNQPNSVSSEFQGMKALVVDPRPIRAKVSRYHIQR 603
GSTFTFTAVF NG + N NNQP + SEF+GMKA+VVD RP RAKVS YH QR
Sbjct: 712 GSTFTFTAVFSNGMQPAERKND---NNQP--IFSEFRGMKAVVVDHRPARAKVSWYHFQR 766
Query: 604 LGIQVEVVSDQLQCLSQIASGSKIINMILVEQEVWEKDTSVSTLFVNNLRKLGCGFQSKL 663
LGI+VEVV Q L + G+ +NMIL+EQE+W ++ F+ L+K KL
Sbjct: 767 LGIRVEVVPRVEQALHYLKIGTTTVNMILIEQEIWNREADD---FIKKLQKDPLFLSPKL 823
Query: 664 FLLANSISSSRANTSTDGVSIPSVIMKPLRSSMLAASLQRAMGVGNKGNIRNWELPSMSL 723
LLANS+ SS + G+ P VI+KPLR+SMLAA+LQR +G+G + ++ P++ L
Sbjct: 824 ILLANSVESSISEALCTGIDPPIVIVKPLRASMLAATLQRGLGIGIREPPQHKGPPALIL 883
Query: 724 RHLLLGRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQ 783
R+LLLGRKILIVDDNNVNL+VAA LK+YGA VVC E G KA LL PPH+FDACFMDIQ
Sbjct: 884 RNLLLGRKILIVDDNNVNLRVAAGALKKYGADVVCAESGIKAISLLKPPHEFDACFMDIQ 943
Query: 784 MPEMDGFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECL 843
MPEMDGFEAT+ IR+ME N RI+ GE I N +++H+P+LAMTADVIQAT+EECL
Sbjct: 944 MPEMDGFEATRRIRDMEEEMNKRIKNGEALIVENGNKTSWHLPVLAMTADVIQATHEECL 1003
Query: 844 RSGMDGYVSKPFEAEQLYREVSRFF 868
+ GMDGYVSKPFEAEQLYREVSRFF
Sbjct: 1004 KCGMDGYVSKPFEAEQLYREVSRFF 1028
>sp|Q9C5U2|AHK2_ARATH Histidine kinase 2 OS=Arabidopsis thaliana GN=AHK2 PE=1 SV=1
Length = 1176
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/879 (56%), Positives = 632/879 (71%), Gaps = 36/879 (4%)
Query: 11 YTERTAFERPLTSGVAYAVRVLRSEREEFEKQQGWTIKRMDTFEHNPVHKD------EPS 64
YTERT FERPLTSGVAYA++V SERE+FEK+ GW IK+M+T E V +D +P+
Sbjct: 314 YTERTNFERPLTSGVAYALKVPHSEREKFEKEHGWAIKKMET-EDQTVVQDCVPENFDPA 372
Query: 65 PIEEEYAPVIFAQDTVSHVISLDMLSGKEDRENVLRARASGKGVLTAPFRLLKTNRLGVI 124
PI++EYAPVIFAQ+TVSH++S+DM+SG+EDREN+LRARASGKGVLT+PF+LLK+N LGV+
Sbjct: 373 PIQDEYAPVIFAQETVSHIVSVDMMSGEEDRENILRARASGKGVLTSPFKLLKSNHLGVV 432
Query: 125 LTFAVYKRELPSNATPNERIEATDGYLGGIFDIESLVEKLLHQLASKQTIFVNVYDITNL 184
LTFAVY LP +AT +R+EAT GYLG +D+ SLVEKLLHQLASKQTI V+VYD TN
Sbjct: 433 LTFAVYDTSLPPDATEEQRVEATIGYLGASYDMPSLVEKLLHQLASKQTIAVDVYDTTNT 492
Query: 185 SHPISMYGSNVSDDGLWLVSTLNFGDPFRKHEMRCRFKQKAPWPLLAISTSIGILVIASL 244
S I MYGS + D +S+L+FGDP R HEM CRFK K P P AI+ SI +LVI L
Sbjct: 493 SGLIKMYGSEIGDISEQHISSLDFGDPSRNHEMHCRFKHKLPIPWTAITPSILVLVITFL 552
Query: 245 VGHIFQATVNRIAKVEEDYHGMMELKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDM 304
VG+I +NRIA VEED M ELK +AEAAD+AKSQFLATVSHEIRTPMNGVLGML M
Sbjct: 553 VGYILYEAINRIATVEEDCQKMRELKARAEAADIAKSQFLATVSHEIRTPMNGVLGMLKM 612
Query: 305 LMDTELDVTQQDYVRTAQASGKALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLS 364
LMDT+LD Q DY +TA SGK L SLINEVLDQAK+ESG+LELE V F++R ILD+V S
Sbjct: 613 LMDTDLDAKQMDYAQTAHGSGKDLTSLINEVLDQAKIESGRLELENVPFDMRFILDNVSS 672
Query: 365 LFSGKSQDKGVELAVYISDRVPETLIGDPGRFRQIITNLMGNSIKFT-EKGHIFVTVYLV 423
L SGK+ +KG+ELAVY+S +VP+ ++GDP RFRQIITNL+GNSIKFT E+GHIF++V+L
Sbjct: 673 LLSGKANEKGIELAVYVSSQVPDVVVGDPSRFRQIITNLVGNSIKFTQERGHIFISVHLA 732
Query: 424 EEVVDSIEVETEL---------SSSKNTLSGYPVADRCHSWKGFKTFNQDGSTSPFKSSS 474
+EV + + +E + S S T+SG+P + SWK FKT +S +
Sbjct: 733 DEVKEPLTIEDAVLKQRLALGCSESGETVSGFPAVNAWGSWKNFKT------CYSTESQN 786
Query: 475 ADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPSISRTHGGTGIGLSISKYLVGRMKGE 534
+D I L+V+VEDTG GIP++AQ RIFTPFMQ S SRT+GGTGIGLSISK LV M+GE
Sbjct: 787 SDQIKLLVTVEDTGVGIPVDAQGRIFTPFMQADSSTSRTYGGTGIGLSISKRLVELMQGE 846
Query: 535 IGFVSIPNIGSTFTFTAVFGNGSSTSNEHNSQQMNNQPNSVSSEFQGMKALVVDPRPIRA 594
+GFVS P IGSTF+FT VFG + ++ ++ + EF G++ALV+D R IRA
Sbjct: 847 MGFVSEPGIGSTFSFTGVFGKAETNTSITKLERF----DLAIQEFTGLRALVIDNRNIRA 902
Query: 595 KVSRYHIQRLGIQVEVVSDQLQCLSQIASGSKIINMILVEQEVWEKD--TSVSTLFVNNL 652
+V+RY ++RLGI ++VS + S + + MIL++++ W K+ + + LF +
Sbjct: 903 EVTRYELRRLGISADIVSSLRMACTCCISKLENLAMILIDKDAWNKEEFSVLDELFTRS- 961
Query: 653 RKLGCGFQSKLFLLANSIS-SSRANTSTDGVSIPSVIMKPLRSSMLAASLQRAMGVGNKG 711
K+ K+FLLA S + + R+ + G+ I V++KPLR S+L LQ + G K
Sbjct: 962 -KVTFTRVPKIFLLATSATLTERSEMKSTGL-IDEVVIKPLRMSVLICCLQETLVNGKK- 1018
Query: 712 NIRNWELPSMSLRHLLLGRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMP 771
R +L HLL ++IL+VDDN VN +VA LK+YGA V CVE GK A +L P
Sbjct: 1019 --RQPNRQRRNLGHLLREKQILVVDDNLVNRRVAEGALKKYGAIVTCVESGKAALAMLKP 1076
Query: 772 PHQFDACFMDIQMPEMDGFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMT 831
PH FDACFMD+QMPEMDGFEAT+ +RE+E N +I GEVS E + S++HVPILAMT
Sbjct: 1077 PHNFDACFMDLQMPEMDGFEATRRVRELEREINKKIASGEVSAEMFCKFSSWHVPILAMT 1136
Query: 832 ADVIQATYEECLRSGMDGYVSKPFEAEQLYREVSRFFPP 870
ADVIQAT+EEC++ GMDGYVSKPFE E LY V+RFF P
Sbjct: 1137 ADVIQATHEECMKCGMDGYVSKPFEEEVLYTAVARFFEP 1175
>sp|Q9C5U0|AHK4_ARATH Histidine kinase 4 OS=Arabidopsis thaliana GN=AHK4 PE=1 SV=1
Length = 1080
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/890 (54%), Positives = 615/890 (69%), Gaps = 52/890 (5%)
Query: 11 YTERTAFERPLTSGVAYAVRVLRSEREEFEKQQGWTIKRMDTFEHNPVHKDEPSPIEEEY 70
YT RTAFERPL SGVAYA +V+ ERE FE+Q W IK MD + EPSP+ +EY
Sbjct: 210 YTARTAFERPLLSGVAYAEKVVNFEREMFERQHNWVIKTMD--------RGEPSPVRDEY 261
Query: 71 APVIFAQDTVSHVISLDMLSGKEDRENVLRARASGKGVLTAPFRLLKTNRLGVILTFAVY 130
APVIF+QD+VS++ SLDM+SG+EDREN+LRAR +GK VLT+PFRLL+T+ LGV+LTF VY
Sbjct: 262 APVIFSQDSVSYLESLDMMSGEEDRENILRARETGKAVLTSPFRLLETHHLGVVLTFPVY 321
Query: 131 KRELPSNATPNERIEATDGYLGGIFDIESLVEKLLHQLASKQTIFVNVYDITNLSHPISM 190
K LP N T ERI AT GYLGG FD+ESLVE LL QLA Q I V+VYDITN S P+ M
Sbjct: 322 KSSLPENPTVEERIAATAGYLGGAFDVESLVENLLGQLAGNQAIVVHVYDITNASDPLVM 381
Query: 191 YGSN--VSDDGLWLVSTLNFGDPFRKHEMRCRFKQKAPWPLLAISTSIGILVIASLVGHI 248
YG+ +D L S L+FGDPFRKH+M CR+ QKAP PL ++T I LVG+I
Sbjct: 382 YGNQDEEADRSLSHESKLDFGDPFRKHKMICRYHQKAPIPLNVLTTVPLFFAIGFLVGYI 441
Query: 249 FQATVNRIAKVEEDYHGMMELKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDT 308
I KVE+D+H M ELK +AEAADVAKSQFLATVSHEIRTPMNG+LGML ML+DT
Sbjct: 442 LYGAAMHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLAMLLDT 501
Query: 309 ELDVTQQDYVRTAQASGKALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSG 368
EL TQ+DY +TAQ GKAL++LINEVLD+AK+E+GKLELE+V F++R+ILDDVLSLFS
Sbjct: 502 ELSSTQRDYAQTAQVCGKALIALINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSE 561
Query: 369 KSQDKGVELAVYISDRVPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVD 428
+S++K +ELAV++SD+VPE + GD GRFRQII NL+GNS+KFTEKGHIFV V+L E+ D
Sbjct: 562 ESRNKSIELAVFVSDKVPEIVKGDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSKD 621
Query: 429 SIEVETELS-------------SSKNTLSGYPVADRCHSWKGFKTF-NQDGSTSPFKSSS 474
E + L+ SS NTLSGY AD +SW FK +++ S S F SS
Sbjct: 622 ESEPKNALNGGVSEEMIVVSKQSSYNTLSGYEAADGRNSWDSFKHLVSEEQSLSEFDISS 681
Query: 475 ADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPSISRTHGGTGIGLSISKYLVGRMKGE 534
+ L+VS+EDTG GIPL AQ R+F PFMQ S SR +GGTGIGLSISK LV M+G+
Sbjct: 682 N--VRLMVSIEDTGIGIPLVAQGRVFMPFMQADSSTSRNYGGTGIGLSISKCLVELMRGQ 739
Query: 535 IGFVSIPNIGSTFTFTAVFGNGSSTSNEHNSQQMNNQPNSVSSEFQGMKALVVDPRPIRA 594
I F+S P+IGSTF FTAV S ++ ++ N + + S F+GMKA+VVD +P+RA
Sbjct: 740 INFISRPHIGSTFWFTAVLEKCDKCSAINHMKKPNVE--HLPSTFKGMKAIVVDAKPVRA 797
Query: 595 KVSRYHIQRLGIQVEVVSDQLQCLSQIAS----GSKI-----INMILVEQEVW--EKDTS 643
V+RYH++RLGI V+VV+ + A+ GS + ++MILVE++ W +D
Sbjct: 798 AVTRYHMKRLGINVDVVTSLKTAVVAAAAFERNGSPLPTKPQLDMILVEKDSWISTEDND 857
Query: 644 VSTLFVNNLRKLGCGFQS-KLFLLANSISSSRANTSTDGVSIPSVIMKPLRSSMLAASLQ 702
+N+ +S KL L A +I++S + + +VIMKPLR+SM+ A LQ
Sbjct: 858 SEIRLLNSRTNGNVHHKSPKLALFATNITNSEFDRAKSAGFADTVIMKPLRASMIGACLQ 917
Query: 703 RAMGVGNKGNIRNWELPSMSLRHLLLGRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERG 762
+ + + +L+ LL G+KIL+VDDN VN +VAA LK++GA VVC E G
Sbjct: 918 QVLELRKTRQQHPEGSSPATLKSLLTGKKILVVDDNIVNRRVAAGALKKFGAEVVCAESG 977
Query: 763 KKATELLMPPHQFDACFMDIQMPEMDGFEATKIIREMEHNFNNRIRRGEVSIEAYENVSN 822
+ A LL PH FDACFMDIQMP+MDGFEAT+ IR ME + + + ++E
Sbjct: 978 QVALGLLQIPHTFDACFMDIQMPQMDGFEATRQIRMME-----KETKEKTNLE------- 1025
Query: 823 FHVPILAMTADVIQATYEECLRSGMDGYVSKPFEAEQLYREVSRFFPPIP 872
+H+PILAMTADVI ATYEECL+SGMDGYVSKPFE E LY+ V++ F P P
Sbjct: 1026 WHLPILAMTADVIHATYEECLKSGMDGYVSKPFEEENLYKSVAKSFKPNP 1075
>sp|Q54YZ9|DHKJ_DICDI Hybrid signal transduction histidine kinase J OS=Dictyostelium
discoideum GN=dhkJ PE=3 SV=2
Length = 2062
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 200/609 (32%), Positives = 296/609 (48%), Gaps = 107/609 (17%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
K+ AEAA AKS F+A +SHEIRTPMNG++GM D+ +DTEL Q++Y+ Q+S +L+
Sbjct: 1337 KETAEAASRAKSDFMANMSHEIRTPMNGIIGMTDLTLDTELTAEQREYLSMVQSSAGSLL 1396
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
++IN++LD +K+E+G+LEL+ F+LRA L D L S ++ K +EL I+ VP++L
Sbjct: 1397 TIINDILDFSKIEAGRLELDQAEFSLRAHLYDALKTLSWRAHQKCIELVCDIASDVPDSL 1456
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
IGDPGR RQI+ NL+GN+IKFT +G + + V +VE LS +
Sbjct: 1457 IGDPGRLRQIVNNLVGNAIKFTSQGEVDLVV----------KVEKSLSCGE--------- 1497
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
+ L SV DTG GIP + IF F Q S
Sbjct: 1498 ----------------------------VVLKFSVIDTGIGIPKDKLHLIFEAFSQADGS 1529
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTFTAVFGNGSSTSNEHNSQQMN 569
I+R +GGTG+GL+IS LV MKG++ VS GSTF FTA Q
Sbjct: 1530 ITRRYGGTGLGLTISTRLVELMKGKLSVVSKSGKGSTFEFTA---------------QFP 1574
Query: 570 NQPNS--VSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQCLSQIASGSKI 627
PN ++ + + L+VD KV + + GI EV ++ + I +K
Sbjct: 1575 TSPNQLPLTEKLNDVHTLIVDDNKSTLKVLKQILSEFGITSEVSNNTQDAFNMIVKATKT 1634
Query: 628 IN---MILVEQEVWEKDTSVSTLFV-NNLRKLGCGFQSKLFLLANSISSSRANTSTDGVS 683
I V+ ++ TS+ + V N+ C ++K+ +L S R +
Sbjct: 1635 TKPFEFIFVDAQL---GTSLIDMMVEKNMNH--C--KTKIIMLI-SGGGQRGYPDSSSNF 1686
Query: 684 IPSVIMKPLRSSMLAASLQRAMGVGNKGNIRNWELPSMSLRHLLLGRK----ILIVDDNN 739
I + KP+ S + L R +G R ++P + + L + IL+ +DN
Sbjct: 1687 ITGYLSKPVSPSEIFDILTR------QGITR--QIPKQLCKKIQLTSEIFGDILLAEDNA 1738
Query: 740 VNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDGFEATKIIREM 799
VN ++A L+++G V E G +A +FD MD+QMP GFEAT IR+
Sbjct: 1739 VNQRLAIRLLEKFGHRVQLAENGLQAVA-SSQLRKFDLILMDVQMPHCGGFEATAQIRKR 1797
Query: 800 EHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDGYVSKPFEAEQ 859
EH H PI+AMTA + +CL +GMD Y+SKP +Q
Sbjct: 1798 EHE------------------QGIHTPIIAMTAHALARDRVKCLEAGMDDYISKPINPDQ 1839
Query: 860 LYREVSRFF 868
L + ++
Sbjct: 1840 LKAMIEKYL 1848
>sp|P0AEC5|BARA_ECOLI Signal transduction histidine-protein kinase BarA OS=Escherichia
coli (strain K12) GN=barA PE=1 SV=1
Length = 918
Score = 239 bits (609), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 185/615 (30%), Positives = 285/615 (46%), Gaps = 126/615 (20%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
KK+A+ A KS+FLA +SHE+RTP+NGV+G + + TEL TQ+D++ T + S L+
Sbjct: 283 KKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLL 342
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
++IN+VLD +K+E+GKL LE++ F LR+ LD+V++L + S DKG+EL + I VP+ +
Sbjct: 343 AIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNV 402
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
IGDP R +QIITNL+GN+IKFTE G+I + V +++E ++ ++T G P
Sbjct: 403 IGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQI---RDTGIGIPER 459
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
D+ ++ F+ Q S
Sbjct: 460 DQSRLFQAFR---------------------------------------------QADAS 474
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTF-------TAVFGNGSSTSNE 562
ISR HGGTG+GL I++ LV M G+I F S PN GSTF F + G ST
Sbjct: 475 ISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCL 534
Query: 563 HNSQQMNNQPNSVSSEF------QGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQ 616
+ +PNS +++ + +V P + Y + LGI V
Sbjct: 535 AGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREP--- 591
Query: 617 CLSQIASGSKIINMILVEQEVWEKDTSVSTLFVNNLRKLGCGFQSKLFLLANSISSSRAN 676
+ ++ E K S++ + L C Q +
Sbjct: 592 --------------LTMQHERLAKAVSMTDFL---MLALPCHAQ-----------VNAEK 623
Query: 677 TSTDGVSIPSVIMKPLRSSMLAASLQRAMGVGNKGNIRNWELPSMSLRHLLLGRKILIVD 736
DG+ + ++KPL + L +L + +N LP L + ++ VD
Sbjct: 624 LKQDGIG--ACLLKPLTPTRLLPALTEFC-----HHKQNTLLPVTDESKLAM--TVMAVD 674
Query: 737 DNNVNLKVAAAGLKRYGAAVVCVERGKKATELL--MPPHQFDACFMDIQMPEMDGFEATK 794
DN NLK+ A L+ V + G +A E MP FD MDIQMP+MDG A +
Sbjct: 675 DNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMP---FDLILMDIQMPDMDGIRACE 731
Query: 795 IIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDGYVSKP 854
+I ++ H P++A+TA + E+ L +GM Y++KP
Sbjct: 732 LIHQLPH--------------------QQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKP 771
Query: 855 FEAEQLYREVSRFFP 869
E E+L+ + R+ P
Sbjct: 772 IEEERLHNLLLRYKP 786
>sp|P0AEC6|BARA_ECOL6 Signal transduction histidine-protein kinase BarA OS=Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=barA
PE=1 SV=1
Length = 918
Score = 239 bits (609), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 185/615 (30%), Positives = 285/615 (46%), Gaps = 126/615 (20%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
KK+A+ A KS+FLA +SHE+RTP+NGV+G + + TEL TQ+D++ T + S L+
Sbjct: 283 KKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLL 342
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
++IN+VLD +K+E+GKL LE++ F LR+ LD+V++L + S DKG+EL + I VP+ +
Sbjct: 343 AIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNV 402
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
IGDP R +QIITNL+GN+IKFTE G+I + V +++E ++ ++T G P
Sbjct: 403 IGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQI---RDTGIGIPER 459
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
D+ ++ F+ Q S
Sbjct: 460 DQSRLFQAFR---------------------------------------------QADAS 474
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTF-------TAVFGNGSSTSNE 562
ISR HGGTG+GL I++ LV M G+I F S PN GSTF F + G ST
Sbjct: 475 ISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCL 534
Query: 563 HNSQQMNNQPNSVSSEF------QGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQ 616
+ +PNS +++ + +V P + Y + LGI V
Sbjct: 535 AGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREP--- 591
Query: 617 CLSQIASGSKIINMILVEQEVWEKDTSVSTLFVNNLRKLGCGFQSKLFLLANSISSSRAN 676
+ ++ E K S++ + L C Q +
Sbjct: 592 --------------LTMQHERLAKAVSMTDFL---MLALPCHAQ-----------VNAEK 623
Query: 677 TSTDGVSIPSVIMKPLRSSMLAASLQRAMGVGNKGNIRNWELPSMSLRHLLLGRKILIVD 736
DG+ + ++KPL + L +L + +N LP L + ++ VD
Sbjct: 624 LKQDGIG--ACLLKPLTPTRLLPALTEFC-----HHKQNTLLPVTDESKLAM--TVMAVD 674
Query: 737 DNNVNLKVAAAGLKRYGAAVVCVERGKKATELL--MPPHQFDACFMDIQMPEMDGFEATK 794
DN NLK+ A L+ V + G +A E MP FD MDIQMP+MDG A +
Sbjct: 675 DNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMP---FDLILMDIQMPDMDGIRACE 731
Query: 795 IIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDGYVSKP 854
+I ++ H P++A+TA + E+ L +GM Y++KP
Sbjct: 732 LIHQLPH--------------------QQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKP 771
Query: 855 FEAEQLYREVSRFFP 869
E E+L+ + R+ P
Sbjct: 772 IEEERLHNLLLRYKP 786
>sp|P0AEC7|BARA_ECO57 Signal transduction histidine-protein kinase BarA OS=Escherichia
coli O157:H7 GN=barA PE=3 SV=1
Length = 918
Score = 239 bits (609), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 185/615 (30%), Positives = 285/615 (46%), Gaps = 126/615 (20%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
KK+A+ A KS+FLA +SHE+RTP+NGV+G + + TEL TQ+D++ T + S L+
Sbjct: 283 KKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLL 342
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
++IN+VLD +K+E+GKL LE++ F LR+ LD+V++L + S DKG+EL + I VP+ +
Sbjct: 343 AIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNV 402
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
IGDP R +QIITNL+GN+IKFTE G+I + V +++E ++ ++T G P
Sbjct: 403 IGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQI---RDTGIGIPER 459
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
D+ ++ F+ Q S
Sbjct: 460 DQSRLFQAFR---------------------------------------------QADAS 474
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTF-------TAVFGNGSSTSNE 562
ISR HGGTG+GL I++ LV M G+I F S PN GSTF F + G ST
Sbjct: 475 ISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCL 534
Query: 563 HNSQQMNNQPNSVSSEF------QGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQ 616
+ +PNS +++ + +V P + Y + LGI V
Sbjct: 535 AGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREP--- 591
Query: 617 CLSQIASGSKIINMILVEQEVWEKDTSVSTLFVNNLRKLGCGFQSKLFLLANSISSSRAN 676
+ ++ E K S++ + L C Q +
Sbjct: 592 --------------LTMQHERLAKAVSMTDFL---MLALPCHAQ-----------VNAEK 623
Query: 677 TSTDGVSIPSVIMKPLRSSMLAASLQRAMGVGNKGNIRNWELPSMSLRHLLLGRKILIVD 736
DG+ + ++KPL + L +L + +N LP L + ++ VD
Sbjct: 624 LKQDGIG--ACLLKPLTPTRLLPALTEFC-----HHKQNTLLPVTDESKLAM--TVMAVD 674
Query: 737 DNNVNLKVAAAGLKRYGAAVVCVERGKKATELL--MPPHQFDACFMDIQMPEMDGFEATK 794
DN NLK+ A L+ V + G +A E MP FD MDIQMP+MDG A +
Sbjct: 675 DNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMP---FDLILMDIQMPDMDGIRACE 731
Query: 795 IIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDGYVSKP 854
+I ++ H P++A+TA + E+ L +GM Y++KP
Sbjct: 732 LIHQLPH--------------------QQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKP 771
Query: 855 FEAEQLYREVSRFFP 869
E E+L+ + R+ P
Sbjct: 772 IEEERLHNLLLRYKP 786
>sp|P59342|BARA_SHIFL Signal transduction histidine-protein kinase BarA OS=Shigella
flexneri GN=barA PE=3 SV=1
Length = 918
Score = 237 bits (605), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 184/615 (29%), Positives = 284/615 (46%), Gaps = 126/615 (20%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
KK+A+ A KS+FLA +SHE+RTP+NGV+G + + TEL TQ+D++ T + S L+
Sbjct: 283 KKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLL 342
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
++IN+VLD +K+E+GKL LE++ F LR+ LD+V++L + S DKG+EL + I VP+ +
Sbjct: 343 AIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNV 402
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
IGDP R +QIITNL+GN+IKFTE G+I + V +++E ++ ++T G P
Sbjct: 403 IGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQI---RDTGIGIPER 459
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
D+ ++ F+ Q S
Sbjct: 460 DQSRLFQAFR---------------------------------------------QADAS 474
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTF-------TAVFGNGSSTSNE 562
ISR HGGTG+GL I++ LV M G+I F S PN GSTF F + G S
Sbjct: 475 ISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSIQCL 534
Query: 563 HNSQQMNNQPNSVSSEF------QGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQ 616
+ +PNS +++ + +V P + Y + LGI V
Sbjct: 535 AGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREP--- 591
Query: 617 CLSQIASGSKIINMILVEQEVWEKDTSVSTLFVNNLRKLGCGFQSKLFLLANSISSSRAN 676
+ ++ E K S++ + L C Q +
Sbjct: 592 --------------LTMQHERLAKAVSMTDFL---MLALPCHAQ-----------VNAEK 623
Query: 677 TSTDGVSIPSVIMKPLRSSMLAASLQRAMGVGNKGNIRNWELPSMSLRHLLLGRKILIVD 736
DG+ + ++KPL + L +L + +N LP L + ++ VD
Sbjct: 624 LKQDGIG--ACLLKPLTPTRLLPALTEFC-----HHKQNTLLPVTDESKLAM--TVMAVD 674
Query: 737 DNNVNLKVAAAGLKRYGAAVVCVERGKKATELL--MPPHQFDACFMDIQMPEMDGFEATK 794
DN NLK+ A L+ V + G +A E MP FD MDIQMP+MDG A +
Sbjct: 675 DNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMP---FDLILMDIQMPDMDGIRACE 731
Query: 795 IIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDGYVSKP 854
+I ++ H P++A+TA + E+ L +GM Y++KP
Sbjct: 732 LIHQLPH--------------------QRQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKP 771
Query: 855 FEAEQLYREVSRFFP 869
E E+L+ + R+ P
Sbjct: 772 IEEERLHNLLLRYKP 786
>sp|P48027|GACS_PSESY Sensor protein GacS OS=Pseudomonas syringae pv. syringae GN=gacS
PE=3 SV=1
Length = 907
Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 185/613 (30%), Positives = 280/613 (45%), Gaps = 97/613 (15%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
+K+A A KS+FLA +SHEIRTP+NG+LG +L +EL Q DY+ T + S L+
Sbjct: 265 RKEALEASRIKSEFLANMSHEIRTPLNGILGFTHLLQKSELTPRQFDYLGTIEKSADNLL 324
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
S+INE+LD +K+E+GKL L+ + FNLR +L D L++ + + K +EL + P L
Sbjct: 325 SIINEILDFSKIEAGKLVLDNIPFNLRDLLQDTLTILAPAAHAKQLELVSLVYRDTPLAL 384
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
GDP R RQI+TNL+ N+IKFT +G I L E ETE
Sbjct: 385 SGDPLRLRQILTNLVSNAIKFTREGTIVARAML--------EDETE-------------- 422
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
+ L +SV+DTG G+ + +F F Q S
Sbjct: 423 --------------------------EHAQLRISVQDTGIGLSSQDVRALFQAFSQADNS 456
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTFTAVFGNGSSTSNEHNSQQMN 569
+SR GGTG+GL ISK L+ +M GEIG S P GS F + E
Sbjct: 457 LSRQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSEFWISLKLPKAREDKEE------- 509
Query: 570 NQPNSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQCLSQIASGSKI-- 627
S++ G++A V++ + + + ++ G+Q V ++ L+ + + +
Sbjct: 510 ----SLNIPLGGLRAAVLEHHDLARQALEHQLEDCGLQTIVFNNLENLLNGVTAAHETPA 565
Query: 628 -INMILVEQEVWEKDTSVSTLFVNNLRKLGCGFQSKLFLLANSISSSRANTSTDGVSIPS 686
I++ ++ E + +L L C K+ +L + + + V
Sbjct: 566 AIDLAVLGVTALEISPERLRQHIWDLENLNC----KVMVLCPTTEHALFQLAVHDVYT-Q 620
Query: 687 VIMKPLRSSMLAASLQRAMGVGNKGNIRNWELPSMSLRHLLLGRKILIVDDNNVNLKVAA 746
+ KP + L +L + +R P +S R ++L VDDN NL +
Sbjct: 621 LQAKPACTRKLQKALSELIA---PRAVRADIGPPLSSR----APRVLCVDDNPANLLLVQ 673
Query: 747 AGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDGFEATKIIREMEHNFNNR 806
L+ GA VV VE G A + FD MD+QMP MDG +AT+ IR
Sbjct: 674 TLLEDMGAEVVAVEGGYAAVNAVQ-QEAFDLVLMDVQMPGMDGRQATEAIR--------- 723
Query: 807 IRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDGYVSKPFEAEQLYREVSR 866
+ EA N S+ PI+A+TA + L+SGMD Y++KP QL + V +
Sbjct: 724 ------AWEAERNQSSL--PIVALTAHAMANEKRSLLQSGMDDYLTKPISERQLAQVVLK 775
Query: 867 FFP-----PIPDR 874
+ P P+R
Sbjct: 776 WTGLALRNPAPER 788
>sp|Q86CZ2|DHKK_DICDI Hybrid signal transduction histidine kinase K OS=Dictyostelium
discoideum GN=dhkK PE=1 SV=1
Length = 1213
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 188/346 (54%), Gaps = 47/346 (13%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTE-LDVTQQDYVRTAQASGKAL 328
K A A A+ +FLAT+SHEIRTP+NG++GM +L D+ L ++ + ++ G L
Sbjct: 806 KDAAIEAYQARQEFLATMSHEIRTPLNGLIGMATLLRDSHNLPPEEKTMAKAVKSCGDIL 865
Query: 329 VSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPET 388
+ L+N++LD +K+E+ ++ LE + F +R + + + SG++ +K + L+ +SD++P
Sbjct: 866 LRLVNDILDLSKLEANQMGLEHIPFRMRELTQQICHVLSGQANEKNIHLSCEVSDKIPSI 925
Query: 389 LIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPV 448
L+GD GR QI+ NL GN++KFT+ G++ + ++D IE E+EL S K
Sbjct: 926 LLGDSGRILQILMNLTGNALKFTQSGYVKI-------IIDLIEEESELVSLK-------- 970
Query: 449 ADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGP 508
KG N+ V+DTG G+P+E+ +IF F+Q P
Sbjct: 971 -------KG-------------------EYNISFRVKDTGIGVPVESHQKIFEAFVQADP 1004
Query: 509 SISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNI-GSTFTFTAVFGNGSSTSNEHNSQQ 567
S SR +GG+G+GL + LV MKGEIG + P+ GSTF F G+ S QQ
Sbjct: 1005 SDSRKYGGSGLGLYLCAKLVRLMKGEIGVYNNPDCDGSTFWFILPLEEGTDQS----MQQ 1060
Query: 568 MNNQPNSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSD 613
MNN + +K L+ + I +V+ ++++GI+ EV +
Sbjct: 1061 MNNGARHKAFPQDCVKVLIAEDNIINQRVAVKFLEKIGIKAEVAGN 1106
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 731 KILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDGF 790
K+LI +DN +N +VA L++ G G + E+L H +D FMD QMP +DG
Sbjct: 1076 KVLIAEDNIINQRVAVKFLEKIGIKAEVAGNGNEVLEILERQH-YDLIFMDFQMPILDGL 1134
Query: 791 EATKIIREMEHNFN-NRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDG 849
+K IRE E N NRI + I +TA+ + + C GM+
Sbjct: 1135 RCSKTIREFEQNHKWNRICPS--------------IFICGLTANTMSTDKKRCFDHGMNH 1180
Query: 850 YVSKPFEAEQL 860
++SKPF+ EQL
Sbjct: 1181 FISKPFQLEQL 1191
>sp|O14002|MAK2_SCHPO Peroxide stress-activated histidine kinase mak2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mak2 PE=3 SV=1
Length = 2310
Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 170/644 (26%), Positives = 287/644 (44%), Gaps = 115/644 (17%)
Query: 262 DYHGMMELKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTA 321
D + E ++ A A K+ FLA +SHE+RTP + GML +L DT+L+ Q D V TA
Sbjct: 1736 DINDEKEAREAAMHAVNLKTNFLANMSHELRTPFSSFYGMLSLLSDTKLNEEQYDIVSTA 1795
Query: 322 QASGKALVSLINEVLDQAKVESGKLELEAVS-FNLRAILDDVLSLFSGKSQDKGVELAVY 380
+ S +LV +I+++L+ ++++SGK++LE F++ + D + L K V+++
Sbjct: 1796 KQSCTSLVQIIDDLLNFSELKSGKMKLEPDKVFDVEENIADCIELVYPSLSSKPVQISYD 1855
Query: 381 ISDRVPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSK 440
I VP L GD + RQ+ITNL+GNS+KFT +GHI + ++E +++ E + +L
Sbjct: 1856 IYPNVPALLAGDSAKLRQVITNLLGNSVKFTTEGHILLRCMAIDEEINAEENQCKLR--- 1912
Query: 441 NTLSGYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIF 500
+EDTG G+ E +F
Sbjct: 1913 -----------------------------------------FEIEDTGIGLKEEQLKLLF 1931
Query: 501 TPFMQVGPSISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTFTAVFGNGSSTS 560
PF QV S +R +GG+G+GLSI + M G+IG S+ GSTF F N +S
Sbjct: 1932 NPFTQVDGSTTRIYGGSGLGLSICLQICKIMDGDIGVQSVYGEGSTFWFHVQLRNVTSKL 1991
Query: 561 NEHNSQQMNNQPNSVSSEFQGMKAL-------------------VVDPRPIRAKVSRYHI 601
++ + ++ + + ++ + K L VVD I + + + I
Sbjct: 1992 SQKHFEESHERFANIRQSLKNAKILVVKSFTTSRSIFRSLFSLAVVDTTTIYSDIEQQLI 2051
Query: 602 QRLG-------IQVEVVSDQL-QCLSQIASGSKIINMILVEQEVWEKDTSVST---LFVN 650
L + +E S Q Q ++QI S K+ ++L+ + T V + F+
Sbjct: 2052 DSLDKRQPYDFLCIEAASGQTEQIITQILSNQKLNKVLLIVLLPSIQRTKVRSDGDPFIT 2111
Query: 651 NLRKLGCGFQSKLFLLANSISSSRANTSTDGV----SIPSVIMKPLRSSMLAASLQRAMG 706
+L K QS++F I S+ + + S P+ +++P + + +A+
Sbjct: 2112 SLNK----NQSRIFCFREPIRISKLLQNFPALLSKWSTPTKLVEPSQFRASPRKVDQAVV 2167
Query: 707 VGNKGNIRNWELPSMSLRHLLLGRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKAT 766
+ ++ + +L + LI +DN + K+ L G V G +
Sbjct: 2168 LSSEE------------KEILQKKYALIAEDNLIARKLLTKQLSNLGFQVHAAVDGVELV 2215
Query: 767 ELLMPPHQF---DACFMDIQMPEMDGFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNF 823
+ + QF F D MP DG EA IR E EN +
Sbjct: 2216 K-MYEAKQFGFYSVIFADYHMPIRDGAEAVMDIRAYER----------------ENNCST 2258
Query: 824 HVPILAMTADVIQATYEECLRSGMDGYVSKPFEAEQLYREVSRF 867
+P++A+TAD+ ++ + CL GM+ Y++KPF +QL V F
Sbjct: 2259 PIPVIALTADIQKSAKQRCLEVGMNFYLTKPFTQKQLVNAVREF 2302
>sp|Q55E44|DHKE_DICDI Hybrid signal transduction histidine kinase E OS=Dictyostelium
discoideum GN=dhkE PE=3 SV=1
Length = 1699
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 170/281 (60%), Gaps = 5/281 (1%)
Query: 271 KKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALVS 330
++AE + AK FL TVSHE+RTP+NG+L +++L ++LDVTQ+D++ + S L+
Sbjct: 663 RRAEELNQAKINFLTTVSHEVRTPINGILASVEILDGSQLDVTQRDFLSCIKQSADYLLD 722
Query: 331 LINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETLI 390
LI ++LD +K+E+GK EL+ V FNL +L++ +++ +Q++G+E+ +I VP LI
Sbjct: 723 LITDILDFSKIEAGKFELDRVEFNLITMLEESINIVYRTAQERGIEVLTFIDPDVPIILI 782
Query: 391 GDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVAD 450
GDP R +Q + N + N+IKFT KG + V V +V+++ ++ +++ N + +
Sbjct: 783 GDPYRVKQCVLNFLSNAIKFTHKGQVMVKVSIVDQINNNNNNNNNNNNNNNNNNNNNNNN 842
Query: 451 RCHSWK---GFKTFNQDGSTSPFKSSSADL-INLIVSVEDTGQGIPLEAQSRIFTPFMQV 506
++ GF N + + + ++ L L SVED+G GI E +FTPF Q+
Sbjct: 843 NNNNNNKIVGFSNNNNNNNNNNNNGNNGILNFKLSFSVEDSGVGIKEEVLDCLFTPFHQL 902
Query: 507 GPSISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTF 547
G S R + GTG+GLSISK L M GEIG S+ +GS F
Sbjct: 903 GGS-PRKYLGTGLGLSISKKLTTLMGGEIGVKSVYGVGSAF 942
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 65/127 (51%), Gaps = 21/127 (16%)
Query: 730 RKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDG 789
R LIVDD +N KV A L+R +V E G +A + + FD FMD QMP +DG
Sbjct: 1574 RNALIVDDTELNRKVLAQLLRRMDWSVSFAENGIEALKEITSERCFDIIFMDCQMPILDG 1633
Query: 790 FEATKI--IREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGM 847
FE TK+ +RE+E+N+ + I+A++AD + + C GM
Sbjct: 1634 FETTKLLRLRELENNWK-------------------PLNIVALSADSSSSFGQVCFDCGM 1674
Query: 848 DGYVSKP 854
+GY+ KP
Sbjct: 1675 NGYLGKP 1681
>sp|Q9SXL4|AHK1_ARATH Histidine kinase 1 OS=Arabidopsis thaliana GN=AHK1 PE=1 SV=2
Length = 1207
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 170/319 (53%), Gaps = 15/319 (4%)
Query: 229 LLAISTSIGILVIASLVGHIFQATVNRIAKVEEDYHGMMELKKKAEAADVAKSQFLATVS 288
++ IS S+ I I + I V++ K+ + ++ +++AEA+ KSQFLA +S
Sbjct: 448 IILISASVCIFFIGCVCILILTNGVSKEMKLRAELIRQLDARRRAEASSNYKSQFLANMS 507
Query: 289 HEIRTPMNGVLGMLDMLM-DTELDVTQQDYVRTAQASGKALVSLINEVLDQAKVESGKLE 347
HE+RTPM V+G+LD+L+ D L Q V + AL+ L+N +LD +KVESGKL
Sbjct: 508 HELRTPMAAVIGLLDILISDDCLSNEQYATVTQIRKCSTALLRLLNNILDLSKVESGKLV 567
Query: 348 LEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETLIGDPGRFRQIITNLMGNS 407
LE F+L L+ ++ +FS + + VE + +SD +P + GD R QI NL+ NS
Sbjct: 568 LEEAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPALVRGDSARLVQIFANLISNS 627
Query: 408 IKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVADRCHSWKGFKTFNQDGST 467
IKFT GHI + + E ++S+ E +S DR W KT
Sbjct: 628 IKFTTTGHIILRGWC--ENINSLHDEMSVS-----------VDRRKPWAPMKTKQVQHRN 674
Query: 468 SPFKSS-SADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPSISRTHGGTGIGLSISKY 526
KS +A+ + L V+DTG GI +F F Q PS +RTHGGTG+GL I +
Sbjct: 675 HLQKSCKNANKMVLWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRTHGGTGLGLCIVRN 734
Query: 527 LVGRMKGEIGFVSIPNIGS 545
LV +M GEI V +G+
Sbjct: 735 LVNKMGGEIKVVQKNGLGT 753
Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 50/176 (28%)
Query: 727 LLGRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELL--------MPPHQ---- 774
L G +IL+ +D V +VA L++ GA V V G++A + L P +
Sbjct: 1041 LEGIRILLAEDTPVLQRVATIMLEKMGATVTAVWDGQQAVDSLNYKSINAQAPTEEHKSF 1100
Query: 775 --------------------FDACFMDIQMPEMDGFEATKIIREMEHNFNNRIRRGEVSI 814
+D MD QMP+MDG+EATK IR R E+
Sbjct: 1101 EEETANKVTTRETSLRNSSPYDLILMDCQMPKMDGYEATKAIR-----------RAEIGT 1149
Query: 815 EAYENVSNFHVPILAMTADVIQATYEECLRSGMDGYVSKPFEAEQLYREVSRFFPP 870
E H+PI+A+TA + + +CL GMD Y++KP + + + + P
Sbjct: 1150 E-------LHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDRKLMVSTILSLTKP 1198
>sp|Q54U87|DHKA_DICDI Hybrid signal transduction histidine kinase A OS=Dictyostelium
discoideum GN=dhkA PE=1 SV=1
Length = 2150
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 162/294 (55%), Gaps = 44/294 (14%)
Query: 261 EDYHGMMELKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRT 320
+D ++ K+ AE A+ AKS F+ATVSHE+RTP++GV+G+ D+L++T L Q+DYV+T
Sbjct: 1368 KDMQRLILEKEAAEEANKAKSAFVATVSHEVRTPLSGVIGVSDLLLETNLSEEQRDYVQT 1427
Query: 321 AQASGKALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVY 380
Q S +AL+++IN++LD +K+ES +L++E + F++ V+ + S + D V++ +
Sbjct: 1428 IQKSSQALLTIINDILDYSKLESRQLKMETLPFSIIETCQAVIHMLSVAANDD-VDILLR 1486
Query: 381 ISDRVPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSK 440
+ VP + GD R RQ++ NL+ N+IKFT +GH+ + V DSI
Sbjct: 1487 VPPNVPRIIFGDAMRMRQVLLNLLSNAIKFTSRGHVLTDI----SVDDSI---------- 1532
Query: 441 NTLSGYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIF 500
P ++ ++I+L +++EDTG GIP IF
Sbjct: 1533 ----------------------------PPTNTEEEIIHLCITIEDTGIGIPQSLFDSIF 1564
Query: 501 TPFMQVGPSISRTHGGTGIGLSISKYLVGR-MKGEIGFVSIPNIGSTFTFTAVF 553
PF Q S +R +GGTG+GLSI+K L+ M G I SI GS F F
Sbjct: 1565 EPFSQADNSTTRKYGGTGLGLSITKRLIEEVMGGTIQVSSIVGQGSKFKCIIPF 1618
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 17/138 (12%)
Query: 730 RKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDG 789
+K LIV+DN +N KV A K+ + E G++A + + FD FMD QMP +DG
Sbjct: 2025 KKALIVEDNELNRKVLAQLFKKIDWTISFAENGREALKEITGERCFDIVFMDCQMPVLDG 2084
Query: 790 FEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDG 849
F+ TKIIR E NN R I+A++A + ++CL SGMD
Sbjct: 2085 FQTTKIIRSKERE-NNWKRMN----------------IVALSAGSSSSFVQDCLDSGMDS 2127
Query: 850 YVSKPFEAEQLYREVSRF 867
++ KP L ++++
Sbjct: 2128 FMGKPITLATLKDALAKW 2145
>sp|Q54YH4|DHKB_DICDI Hybrid signal transduction histidine kinase B OS=Dictyostelium
discoideum GN=dhkB PE=1 SV=1
Length = 1969
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 153/290 (52%), Gaps = 48/290 (16%)
Query: 271 KKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALVS 330
+KAEAA+ AK FL TVSHE+RTP+NGVL D+L T LD TQ++++ + SG L+
Sbjct: 952 RKAEAANEAKVIFLTTVSHELRTPINGVLASADILERTTLDSTQKEFLNCIKLSGNYLLD 1011
Query: 331 LINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETLI 390
LIN++LD +K+E+GK+E+ F++ +LD+ + + S +KG++L ++I VP +
Sbjct: 1012 LINDILDYSKIEAGKMEIIKYDFSILKMLDNSIRIVSKNIYEKGLDLCIFIDPNVPVIVN 1071
Query: 391 GDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVAD 450
GD R +QI+ N + NSIKFT G I + V L + D
Sbjct: 1072 GDQRRIKQILLNFLSNSIKFTNHGQIIIRVKLESD------------------------D 1107
Query: 451 RCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPSI 510
HS F VED+G GI E +++F F Q+
Sbjct: 1108 STHSLIKF------------------------DVEDSGIGIKTEHLNQLFASFSQIDSGN 1143
Query: 511 SRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTFTAVFGNGSSTS 560
SR + GTG+GLSISK L M G++ S +GSTF+FT G ++T+
Sbjct: 1144 SRKYQGTGLGLSISKRLCKMMGGDVKVKSEFGVGSTFSFTIPCGIPNTTT 1193
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 731 KILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDGF 790
KIL+V+DN VN+K+ + LK G G +A E + +D MD QMPEMDGF
Sbjct: 1840 KILLVEDNFVNVKIFSKLLKDSGYIFDVAHNGVEAVECVKK-GAYDLILMDCQMPEMDGF 1898
Query: 791 EATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDGY 850
EAT IRE+E + IE+ + + HV I+A+TA+ ++CL GM+ +
Sbjct: 1899 EATTAIRELEKS---------NLIESPPSKKHSHVVIVALTANSGYKDKQKCLSVGMNDF 1949
Query: 851 VSKPFEAEQL 860
+ KP + +
Sbjct: 1950 LQKPIKTSDI 1959
>sp|Q9HUI3|ARUS_PSEAE Sensor histidine kinase AruS OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=aruS PE=3
SV=1
Length = 998
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 155/292 (53%), Gaps = 48/292 (16%)
Query: 258 KVEEDYHGMMELKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDY 317
+VE + K +AEAAD AKS+FLAT+SHEIRTP+NG+LGM ++L + L +
Sbjct: 485 QVERRTASLRRAKDQAEAADRAKSRFLATMSHEIRTPLNGILGMAELLREASLGERDRQR 544
Query: 318 VRTAQASGKALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVEL 377
+R +G+ L++++NEVL A++E EAV F+LR++L+DVL+L ++++ L
Sbjct: 545 LRALATAGEGLLAILNEVLHFARLEEAPDVPEAVDFSLRSLLEDVLTLLEPRARENATRL 604
Query: 378 AVYISDRVPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELS 437
+++ +V + G RQ++TNL+GN++KFTE G + V V +
Sbjct: 605 DLWLDPQVHDGHRGAEQFLRQVLTNLLGNAVKFTEAGEVRVRVERL-------------- 650
Query: 438 SSKNTLSGYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQS 497
+ SA L +SV D G GIP E +
Sbjct: 651 ----------------------------------ARSAGSERLRLSVADDGIGIPEEMRE 676
Query: 498 RIFTPFMQVGPSISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTF 549
RIF F Q G +++R +GGTG+GL+ISK LV + G IG S GSTF F
Sbjct: 677 RIFERFTQGGDAVTRRYGGTGLGLAISKRLVEALGGRIGVESRVGQGSTFWF 728
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 55/142 (38%), Gaps = 19/142 (13%)
Query: 731 KILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDGF 790
++L+V+D +N +VA L+R G V+ E A L +FD +D+ +P M G
Sbjct: 751 EVLLVEDVALNREVAQGLLERDGHRVMLAEDAGPALALCRQ-RRFDLILLDMHLPGMAGL 809
Query: 791 EATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDGY 850
E IR N PI A TA + +GM G
Sbjct: 810 ELCAGIRRQLDGLNR------------------ATPIFAFTASIQPDMVRRYFAAGMQGV 851
Query: 851 VSKPFEAEQLYREVSRFFPPIP 872
+ KP ++L R + +P
Sbjct: 852 LGKPLRMDELRRALGEVGTSVP 873
>sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=rpfC PE=1 SV=2
Length = 726
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 149/285 (52%), Gaps = 47/285 (16%)
Query: 265 GMMELKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQAS 324
M ++A A+ AKS+FLA +SHE RTP+NG+ GM ++L T LD Q++ + T QAS
Sbjct: 174 AMTRAVREARHANQAKSRFLANMSHEFRTPLNGLSGMTEVLATTRLDAEQKECLNTIQAS 233
Query: 325 GKALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDR 384
++L+SL+ EVLD + +E+GK+ ++ F+LR ++ V + +++ + +E ++D
Sbjct: 234 ARSLLSLVEEVLDISAIEAGKIRIDRRDFSLREMIGSVNLILQPQARGRRLEYGTQVADD 293
Query: 385 VPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLS 444
VP+ L GD RQ++ NL+GN++KFTE GH+ + V V
Sbjct: 294 VPDLLKGDTAHLRQVLLNLVGNAVKFTEHGHVLLRVTRV--------------------- 332
Query: 445 GYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFM 504
S+ D + L VEDTG G+P++ + R+F F
Sbjct: 333 --------------------------SGSAEDAVRLRFDVEDTGIGVPMDMRPRLFEAFE 366
Query: 505 QVGPSISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTF 549
Q +SR + GTG+G +I+K LV M G IGF GS F F
Sbjct: 367 QADVGLSRRYEGTGLGTTIAKGLVEAMGGSIGFKENQPSGSVFWF 411
Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 22/180 (12%)
Query: 684 IPSVIMKPLRSSML---AASLQRAMGVGNKGNIRNWELPSMSLRHLLLGRKILIVDDNNV 740
+P I +PL+SS + +L A NI + P + R + ++L+ DD+
Sbjct: 413 LPMAIGEPLKSSTVRVPTGALVDAPEELESSNIIAFSNPFLRHRARVRSMRMLVADDHEA 472
Query: 741 NLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDGFEATKIIREME 800
N V L++ G V+CV ++ + M +DA +D+ MP M+G + K +R M+
Sbjct: 473 NRMVLQRLLEKAGHKVLCVNGAEQVLDA-MAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQ 531
Query: 801 HNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDGYVSKPFEAEQL 860
+ + P++ ++ADV C ++G +++KP A +L
Sbjct: 532 AS------------------GMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAKL 573
>sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=rpfC PE=3 SV=2
Length = 726
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 149/285 (52%), Gaps = 47/285 (16%)
Query: 265 GMMELKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQAS 324
M ++A A+ AKS+FLA +SHE RTP+NG+ GM ++L T LD Q++ + T QAS
Sbjct: 174 AMTRAVREARHANQAKSRFLANMSHEFRTPLNGLSGMTEVLATTRLDAEQKECLNTIQAS 233
Query: 325 GKALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDR 384
++L+SL+ EVLD + +E+GK+ ++ F+LR ++ V + +++ + +E ++D
Sbjct: 234 ARSLLSLVEEVLDISAIEAGKIRIDRRDFSLREMIGSVNLILQPQARGRRLEYGTQVADD 293
Query: 385 VPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLS 444
VP+ L GD RQ++ NL+GN++KFTE GH+ + V V
Sbjct: 294 VPDLLKGDTAHLRQVLLNLVGNAVKFTEHGHVLLRVTRV--------------------- 332
Query: 445 GYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFM 504
S+ D + L VEDTG G+P++ + R+F F
Sbjct: 333 --------------------------SGSAEDAVRLRFDVEDTGIGVPMDMRPRLFEAFE 366
Query: 505 QVGPSISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTF 549
Q +SR + GTG+G +I+K LV M G IGF GS F F
Sbjct: 367 QADVGLSRRYEGTGLGTTIAKGLVEAMGGSIGFKENQPSGSVFWF 411
Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 22/180 (12%)
Query: 684 IPSVIMKPLRSSML---AASLQRAMGVGNKGNIRNWELPSMSLRHLLLGRKILIVDDNNV 740
+P I +PL+SS + +L A NI + P + R + ++L+ DD+
Sbjct: 413 LPMAIGEPLKSSTVRVPTGALVDAPEELESSNIIAFSNPFLRHRARVRSMRMLVADDHEA 472
Query: 741 NLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDGFEATKIIREME 800
N V L++ G V+CV ++ + M +DA +D+ MP M+G + K +R M+
Sbjct: 473 NRMVLQRLLEKAGHKVLCVNGAEQVLDA-MAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQ 531
Query: 801 HNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDGYVSKPFEAEQL 860
+ + P++ ++ADV C ++G +++KP A +L
Sbjct: 532 AS------------------GMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVLAAKL 573
>sp|Q9XH58|ETR1_PELHO Ethylene receptor 1 OS=Pelargonium hortorum GN=ETR1 PE=2 SV=1
Length = 740
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 183/362 (50%), Gaps = 34/362 (9%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
+++AE A A++ FLA ++HE+RTPM+ ++ + +L +T+L Q+ V T S L
Sbjct: 334 RREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETDLTSEQRLMVETILKSSNLLA 393
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
+LIN+VLD +++E G L+L+ +FNL A+ V +L + K + + + +S +PE +
Sbjct: 394 TLINDVLDLSRLEDGSLQLDIATFNLHAVFRQVFNLIKPIASVKKLFITLNVSPDLPEYV 453
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
IGD R QI+ N++GN++KF+++G I VT ++ ++E +PV
Sbjct: 454 IGDEKRLVQIMLNVVGNAVKFSKEGIISVTAFV---------AKSESVRDPRAPDFFPV- 503
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
SS + + V V+D+G GI + ++FT F Q P
Sbjct: 504 -----------------------SSDNQFYMRVQVKDSGSGINPQDMPKLFTKFAQSQPV 540
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSI-PNIGSTFTFTAVFGNGSSTSNEHNSQQM 568
++ GG+G+GL+ISK V M G I S P+ G T TF G ++
Sbjct: 541 ATKNSGGSGLGLAISKRFVNLMDGHIWIDSEGPSKGCTVTFVVKLGIPEGSNEPKLPLMP 600
Query: 569 NNQPNSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQCLSQIASGSKII 628
N+ ++F G+K L++D I V++ + LG V VS +CL ++ K++
Sbjct: 601 KVSANNSQTDFPGLKVLLMDENGISRMVTKGLLMHLGCDVTSVSSSEECLRMVSQDHKVV 660
Query: 629 NM 630
M
Sbjct: 661 FM 662
Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 729 GRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMD 788
G K+L++D+N ++ V L G V V ++ ++ H+ FMD+++P +D
Sbjct: 613 GLKVLLMDENGISRMVTKGLLMHLGCDVTSVSSSEECLRMVSQDHK--VVFMDVRVPGLD 670
Query: 789 GFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMD 848
G E I E F R R I+A+T++ + T E CLR GM+
Sbjct: 671 GHELAVRIHE---KFMKRHERPL---------------IVALTSNADKVTKENCLRVGME 712
Query: 849 GYVSKPFEAEQLYREVSRFF 868
G + KP +++ +S+
Sbjct: 713 GVILKPVSVDKMRNVLSKLL 732
>sp|Q9P896|TCSA_EMENI Two-component system protein A OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tcsA
PE=3 SV=2
Length = 682
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 161/326 (49%), Gaps = 63/326 (19%)
Query: 270 KKKAEAADVA--------KSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTA 321
+K+AEA +A K+ FLA +SHEIRTPMNG+ L ML DT L Q+++
Sbjct: 283 RKEAEACMIAAFEESSRLKTDFLANISHEIRTPMNGMQIALTMLTDTGLSEEQREHANIV 342
Query: 322 QASGKALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYI 381
Q S L+ ++N+VLD +K+ SG L A ++R I+ V+ Q+ GVEL I
Sbjct: 343 QDSMSLLLQIVNDVLDYSKLSSGSFSLHADMLDIREIVGAVVRNCRSSLQE-GVELDTEI 401
Query: 382 SDRVPETLIGDPGRFRQIITNLMGNSIKFTEKG--HIFVTVYLVEEVVDSIEVETELSSS 439
S ++P + GDP R+RQ++ NL+GN++KFTEKG H+ +T EE DS V TE
Sbjct: 402 SPKLPTRMRGDPLRYRQVLQNLVGNAVKFTEKGSIHVKITSSTDEEDSDSSVVRTE---- 457
Query: 440 KNTLSGYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRI 499
V DTG G+P A + +
Sbjct: 458 --------------------------------------------VTDTGIGVPDSAINTL 473
Query: 500 FTPFMQVGPSISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNI-GSTFTFTAVFGNGSS 558
FTPF + S +R + GTG+GLSI K L M G +G+ PN GS F FTA G G S
Sbjct: 474 FTPFSRFANSAARKYQGTGLGLSICKSLAELMDGSVGYSPNPNASGSVFWFTAKMG-GRS 532
Query: 559 TSNEHNSQQMNNQ--PNSVSSEFQGM 582
+ S ++ P V+SE + +
Sbjct: 533 VTPPSKSPSVSGSPVPTEVASEMRSI 558
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 32/152 (21%)
Query: 723 LRHLLLGRKILIVDDNNVNLKVA-----AAGLKRYGAAVVCVERGKKATELL-MPPHQFD 776
+R + + +L+V+DN VN V G +R A G +A ++ P +D
Sbjct: 555 MRSIAPRKHVLLVEDNIVNHTVMLKLLHTIGFQRIDGAW----NGAEAVRMVRQKPLSYD 610
Query: 777 ACFMDIQMPEMDGFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQ 836
MD+ MP +DG AT+ IR+M +PI+A+T + ++
Sbjct: 611 IILMDVSMPVLDGLAATEQIRDM----------------------GLTMPIIAITGNAMK 648
Query: 837 ATYEECLRSGMDGYVSKPFEAEQLYREVSRFF 868
E + GMD + KP +QL R + ++F
Sbjct: 649 GDAETYIAQGMDDCICKPVHRDQLLRVLWKWF 680
>sp|Q9XH57|ETR2_PELHO Ethylene receptor 2 OS=Pelargonium hortorum GN=ETR2 PE=2 SV=1
Length = 741
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 185/370 (50%), Gaps = 36/370 (9%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
+++AE A A++ FLA ++HE+RTPM+ ++ + +L +TEL Q+ V T S L
Sbjct: 334 RREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETVLKSSNLLA 393
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
+LIN+VLD +++E G L+L+ +FNL A+L +V +L + K + +++ ++ +PE
Sbjct: 394 TLINDVLDLSRLEDGSLQLDIGTFNLHALLREVHNLIKPIASVKKLCISLNVATDLPEYA 453
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
+GD R QII N++GN++KF+++G+I +T ++ +
Sbjct: 454 VGDEKRLVQIILNVVGNAVKFSKEGNISITAFVAKS------------------------ 489
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
++ + F + L V V+D+G GI + R+FT F Q P
Sbjct: 490 ---------ESLRDPRAPDFFPICGENQFYLRVQVKDSGLGINPQDIPRLFTKFAQTQPV 540
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSI-PNIGSTFTFTAVFGNGSSTSNEHNSQQM 568
++ GG+G+GL+I K V M+G I S P G T TF G +S E M
Sbjct: 541 ATKNSGGSGLGLAICKRFVNLMEGHIWIDSEGPGKGCTATFVVKLGIPERSS-EPKLLLM 599
Query: 569 NNQP-NSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQCLSQIASGSKI 627
P N + F G+K L++D + V+R + LG V VS + L ++ K+
Sbjct: 600 PKVPANHGQTNFSGLKVLLLDDNGVSRAVTRGLLAHLGCDVTTVSSSDELLRVVSQDYKV 659
Query: 628 INMILVEQEV 637
+ M + EV
Sbjct: 660 VFMDVCMPEV 669
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 729 GRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQ-FDACFMDIQMPEM 787
G K+L++DDN V+ V L G V V + ELL Q + FMD+ MPE+
Sbjct: 613 GLKVLLLDDNGVSRAVTRGLLAHLGCDVTTV---SSSDELLRVVSQDYKVVFMDVCMPEV 669
Query: 788 DGFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGM 847
DGFE I E F R R I+A+T ++ Q T + C R GM
Sbjct: 670 DGFEIAVRIHE---KFMTRHERPL---------------IVALTGNIDQVTKDNCTRVGM 711
Query: 848 DGYVSKPFEAEQLYREVSRFF 868
+G V KP +++ +S
Sbjct: 712 EGVVLKPVSIDKMRNVLSNLL 732
>sp|O49230|ETR1_BRAOL Ethylene receptor 1 OS=Brassica oleracea GN=ETR1 PE=2 SV=1
Length = 735
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 180/364 (49%), Gaps = 44/364 (12%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
+++AE A A++ FLA ++HE+RTPM+ ++ + +L +TEL Q+ V T S L
Sbjct: 334 RREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETVLKSSSLLA 393
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
+L+N+VLD +++E G L+LE +FNL + +VL+L + K + + + ++ +PE +
Sbjct: 394 TLMNDVLDLSRLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPITLNLAPDLPEFV 453
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
+GD R QII N++GN++KF+++G I VT + +
Sbjct: 454 VGDEKRLMQIILNIVGNAVKFSKQGSISVTALVTK------------------------- 488
Query: 450 DRCHSWKGFKTFNQDGSTSP--FKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVG 507
D P F + L V V+D G GI + ++FT F Q
Sbjct: 489 -------------SDNRAPPDFFVVPTGSHFYLRVKVKDLGAGINPQDIPKLFTKFAQTQ 535
Query: 508 PSISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTFTAVFGNGSSTSNEHNSQQ 567
+R+ GG+G+GL+ISK V M+G I I + G TA+F + SNE
Sbjct: 536 SLATRSSGGSGLGLAISKRFVNLMEGNIW---IESEGVGKGCTAIFDVKLAISNESKQSG 592
Query: 568 MNNQP-NSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQCLSQIASGSK 626
+ P N F G+K LV+D + V++ + LG +V VS +CL ++ +
Sbjct: 593 IPKVPANPQHVNFAGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVVSHEHR 652
Query: 627 IINM 630
++ M
Sbjct: 653 VVFM 656
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 22/133 (16%)
Query: 729 GRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMD 788
G K+L++D+N V+ V L G V V ++ ++ H+ FMD+ P
Sbjct: 607 GLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVV--SHEHRVVFMDVCTP--- 661
Query: 789 GFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPIL-AMTADVIQATYEECLRSGM 847
G E +I + F R +R P+L A+T + ++T E+C+ G+
Sbjct: 662 GVENYQIALRIHEKFTKRHQR----------------PLLVALTGNTDKSTKEKCMSFGL 705
Query: 848 DGYVSKPFEAEQL 860
DG + KP + +
Sbjct: 706 DGVLLKPVSLDNM 718
>sp|P49333|ETR1_ARATH Ethylene receptor 1 OS=Arabidopsis thaliana GN=ETR1 PE=1 SV=1
Length = 738
Score = 159 bits (402), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 182/365 (49%), Gaps = 44/365 (12%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
+++AE A A++ FLA ++HE+RTPM+ ++ + +L +TEL Q+ V T S L
Sbjct: 334 RREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLA 393
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
+L+N+VLD +++E G L+LE +FNL + +VL+L + K + + + ++ +PE +
Sbjct: 394 TLMNDVLDLSRLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPITLNLAPDLPEFV 453
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
+GD R QII N++GN++KF+++G I VT + T S A
Sbjct: 454 VGDEKRLMQIILNIVGNAVKFSKQGSISVTALV-------------------TKSDTRAA 494
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
D F + L V V+D+G GI + +IFT F Q
Sbjct: 495 DF------------------FVVPTGSHFYLRVKVKDSGAGINPQDIPKIFTKFAQTQSL 536
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTFTAVFGNGSSTSNEHNSQQMN 569
+R+ GG+G+GL+ISK V M+G I I + G TA+F S N + +
Sbjct: 537 ATRSSGGSGLGLAISKRFVNLMEGNIW---IESDGLGKGCTAIFDVKLGISERSNESKQS 593
Query: 570 NQPNSVS----SEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQCLSQIASGS 625
P + S F G+K LV+D + V++ + LG +V VS +CL ++
Sbjct: 594 GIPKVPAIPRHSNFTGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVVSHEH 653
Query: 626 KIINM 630
K++ M
Sbjct: 654 KVVFM 658
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 21/143 (14%)
Query: 729 GRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMD 788
G K+L++D+N V+ V L G V V ++ ++ H+ FMD+ MP ++
Sbjct: 609 GLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVV--SHEHKVVFMDVCMPGVE 666
Query: 789 GFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPIL-AMTADVIQATYEECLRSGM 847
++ +R E R +R P+L A++ + ++T E+C+ G+
Sbjct: 667 NYQIA--LRIHEKFTKQRHQR----------------PLLVALSGNTDKSTKEKCMSFGL 708
Query: 848 DGYVSKPFEAEQLYREVSRFFPP 870
DG + KP + + +S P
Sbjct: 709 DGVLLKPVSLDNIRDVLSDLLEP 731
>sp|Q54RP6|DHKL_DICDI Hybrid signal transduction histidine kinase L OS=Dictyostelium
discoideum GN=dhkL PE=3 SV=1
Length = 1709
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 138/271 (50%), Gaps = 49/271 (18%)
Query: 284 LATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALVSLINEVLDQAKVES 343
L+ +SH+IRTPM+ ++GM D+L+DT L Q Y+ + S L+++IN++LD +K+E+
Sbjct: 835 LSMMSHDIRTPMSNIIGMADLLLDTSLSQHQHHYLEIIKNSSNTLLTIINDILDISKIEA 894
Query: 344 GKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETLIGDPGRFRQIITNL 403
GKL+++ SF+ A + V+ + + Q KG+EL Y+ ++P LIG R QI+TNL
Sbjct: 895 GKLDIDYESFDFNATVSQVVESMAQRVQSKGLELLSYVDPKIPNILIGPSSRLNQILTNL 954
Query: 404 MGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVADRCHSWKGFKTFNQ 463
+GNS+KFT+KG I + L +E E++
Sbjct: 955 LGNSLKFTDKGEISICCLLNDETDSEYEIK------------------------------ 984
Query: 464 DGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPSISRTHGGTGIGLSI 523
V V DTG GI EA +F F Q +I+R +GG+G+GL+I
Sbjct: 985 ------------------VDVRDTGIGIKKEALPLLFKAFTQAEGTITRQYGGSGLGLAI 1026
Query: 524 SKYLVG-RMKGEIGFVSIPNIGSTFTFTAVF 553
K LV GEI S GSTFT F
Sbjct: 1027 CKELVHLAFNGEISVESQYGHGSTFTCILKF 1057
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 20/143 (13%)
Query: 727 LLGRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPP--HQFDACFMDIQM 784
LLG K+L+VDDN++N+++ + L+ G V V G A + +DA F+DIQM
Sbjct: 1567 LLG-KVLVVDDNHINIQILSKMLQTVGCEVDSVLSGADALAKINQSSGDSYDAIFLDIQM 1625
Query: 785 PEMDGFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLR 844
P+MDGF+ ++ IRE E F S V I+A TA+V + +C
Sbjct: 1626 PDMDGFQVSRKIREREKKF-----------------SLPRVAIIATTANVFKEDQLKCFD 1668
Query: 845 SGMDGYVSKPFEAEQLYREVSRF 867
+GMD ++SKP + ++ + ++
Sbjct: 1669 AGMDDFISKPIKRAEIKEIIKKY 1691
>sp|Q3S4A7|AHK5_ARATH Histidine kinase 5 OS=Arabidopsis thaliana GN=AHK5 PE=2 SV=1
Length = 922
Score = 156 bits (395), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 151/281 (53%), Gaps = 36/281 (12%)
Query: 282 QFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALVSLINEVLDQAKV 341
Q LAT+SHEIR+P++GV+GM ++L T+LD Q+ + +SG ++ LIN++LD +KV
Sbjct: 369 QMLATMSHEIRSPLSGVVGMAEILSTTKLDKEQRQLLNVMISSGDLVLQLINDILDLSKV 428
Query: 342 ESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETLIGDPGRFRQIIT 401
ESG + LEA F R ++ VL + S K + L I+D VP ++GD R RQI+T
Sbjct: 429 ESGVMRLEATKFRPREVVKHVLQT-AAASLKKSLTLEGNIADDVPIEVVGDVLRIRQILT 487
Query: 402 NLMGNSIKFTEKGHIFVTVYLVEE---VVD-SIEVETELSSSKNTLSGYPVADRCHSWKG 457
NL+ N+IKFT +G++ + + ++ E V D ++ +TE +N L+ V C W
Sbjct: 488 NLISNAIKFTHEGNVGIKLQVISEPSFVRDNALNADTE-EHEQNGLTETSVWICCDVW-- 544
Query: 458 FKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPSISRTHGGT 517
DTG GIP A +F +MQ +R +GGT
Sbjct: 545 ----------------------------DTGIGIPENALPCLFKKYMQASADHARKYGGT 576
Query: 518 GIGLSISKYLVGRMKGEIGFVSIPNIGSTFTFTAVFGNGSS 558
G+GL+I K LV M G++ S + GSTFTF + G S
Sbjct: 577 GLGLAICKQLVELMGGQLTVTSRVSEGSTFTFILPYKVGRS 617
Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 80/144 (55%), Gaps = 7/144 (4%)
Query: 731 KILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDGF 790
KIL+V+DN +N+ VA + +K+ G + G +A + +D MD+ MP +DG
Sbjct: 779 KILLVEDNKINIMVAKSMMKQLGHTMDIANNGVEAITAI-NSSSYDLVLMDVCMPVLDGL 837
Query: 791 EATKIIREMEH--NFNNRIRRG-EVSIEAYENVS---NFHVPILAMTADVIQATYEECLR 844
+AT++IR E N+N I G ++S E V +PI+AMTA+ + + EEC
Sbjct: 838 KATRLIRSYEETGNWNAAIEAGVDISTSENEQVCMRPTNRLPIIAMTANTLAESSEECYA 897
Query: 845 SGMDGYVSKPFEAEQLYREVSRFF 868
+GMD ++SKP ++L + ++
Sbjct: 898 NGMDSFISKPVTLQKLRECLQQYL 921
>sp|Q9M7M1|ETR1_PRUPE Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 SV=1
Length = 738
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 179/362 (49%), Gaps = 37/362 (10%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
+++AE A A++ FLA ++HE+RTPM+ ++ + +L +TEL Q+ V T S L
Sbjct: 334 RREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSHLLA 393
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
+LIN+VLD +++E G L+LE +FNL ++ +V +L + K + +++ ++ +P
Sbjct: 394 TLINDVLDLSRLEDGSLQLEIATFNLHSVFREVHNLIKPVASVKKLSVSLNLAADLPVQA 453
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
+GD R QI+ N++GN++KF+++G I +T ++
Sbjct: 454 VGDEKRLMQIVLNVVGNAVKFSKEGSISITAFVA-------------------------- 487
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
+ S + F+ + F + S + L V V+D+G GI + ++FT F Q
Sbjct: 488 -KSESLRDFR------APEFFPAQSDNHFYLRVQVKDSGSGINPQDIPKLFTKFAQTQSL 540
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSI-PNIGSTFTFTAVFGNGSSTSNEHNSQQM 568
+R GG+G+GL+I K V M+G I S P G T F G ++
Sbjct: 541 ATRNSGGSGLGLAICKRFVNLMEGHIWIESEGPGKGCTAIFIVKLGFAERSNESKLPFLT 600
Query: 569 NNQPNSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQCLSQIASGSKII 628
Q N V + F G+K LV+D V++ + LG V VS + L I+ K++
Sbjct: 601 KVQANHVQTNFPGLKVLVMDD---NGSVTKGLLVHLGCDVTTVSSIDEFLHVISQEHKVV 657
Query: 629 NM 630
M
Sbjct: 658 FM 659
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 729 GRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMD 788
G K+L++DDN V L G V V + ++ H+ FMD+ MP +D
Sbjct: 613 GLKVLVMDDNG---SVTKGLLVHLGCDVTTVSSIDEFLHVISQEHK--VVFMDVCMPGID 667
Query: 789 GFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPIL-AMTADVIQATYEECLRSGM 847
G+E I E F R R P+L A+T ++ + T E C+R GM
Sbjct: 668 GYELAVRIHE---KFTKRHER----------------PVLVALTGNIDKMTKENCMRVGM 708
Query: 848 DGYVSKPFEAEQLYREVSRFF 868
DG + KP +++ +S
Sbjct: 709 DGVILKPVSVDKMRSVLSELL 729
>sp|O81122|ETR1_MALDO Ethylene receptor OS=Malus domestica GN=ETR1 PE=2 SV=1
Length = 741
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 177/362 (48%), Gaps = 34/362 (9%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
+++AE A A++ FLA ++HE+RTPM+ ++ + +L +TEL Q+ V T S L
Sbjct: 334 RREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTAEQRLMVETILRSSNLLA 393
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
+LIN+VLD +++E G L+LE +FNL ++ +V ++ + K + + + I+ +P
Sbjct: 394 TLINDVLDLSRLEDGSLQLEIATFNLHSVFREVHNMIKPVASIKRLSVTLNIAADLPMYA 453
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
IGD R Q I N++GN++KF+++G I +T ++
Sbjct: 454 IGDEKRLMQTILNVVGNAVKFSKEGSISITAFVA-------------------------- 487
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
+ S + F+ + F S + L V V+D+G GI + ++FT F Q
Sbjct: 488 -KSESLRDFR------APDFFPVQSDNHFYLRVQVKDSGSGINPQDIPKLFTKFAQTQAL 540
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSIP-NIGSTFTFTAVFGNGSSTSNEHNSQQM 568
+R GG+G+GL+I K V M+G I S G T TF G ++
Sbjct: 541 ATRNSGGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTATFIVKLGFPERSNESKLPFAP 600
Query: 569 NNQPNSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQCLSQIASGSKII 628
Q N V + F G+K LV+D + V++ + LG V VS + L I+ K++
Sbjct: 601 KLQANHVQTNFPGLKVLVMDDNGVSRSVTKGLLAHLGCDVTAVSLIDELLHVISQEHKVV 660
Query: 629 NM 630
M
Sbjct: 661 FM 662
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 22/141 (15%)
Query: 729 GRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMD 788
G K+L++DDN V+ V L G V V + ++ H+ FMD+ MP +D
Sbjct: 613 GLKVLVMDDNGVSRSVTKGLLAHLGCDVTAVSLIDELLHVISQEHK--VVFMDVSMPGID 670
Query: 789 GFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPIL-AMTADVIQATYEECLRSGM 847
G+E I E F R R P+L A+T + + T E C+R G+
Sbjct: 671 GYELAVRIHE---KFTKRHER----------------PVLVALTGSIDKITKENCMRVGV 711
Query: 848 DGYVSKPFEAEQLYREVSRFF 868
DG + KP +++ +S
Sbjct: 712 DGVILKPVSVDKMRSVLSELL 732
>sp|Q551X9|DHKF_DICDI Hybrid signal transduction histidine kinase F OS=Dictyostelium
discoideum GN=dhkF PE=3 SV=1
Length = 1109
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 173/336 (51%), Gaps = 57/336 (16%)
Query: 233 STSIGILVIA-SLVGHIFQATVN----RIAKVEEDYHG-MMELKKKAEAADVAKSQFLAT 286
S SIGI++I + I +N + +++E+ + +ME + A A KSQFLAT
Sbjct: 265 SNSIGIMIIVRDITDQIRLKEMNIELQKKSELEQKRNQELMEARDLALTATKIKSQFLAT 324
Query: 287 VSHEIRTPMNGVLGMLDMLMDTE-LDVTQQDYVRTAQASGKALVSLINEVLDQAKVESGK 345
+SHEIRTP+NG++ M +ML+ T L+ Q D T S + L+S+ +++LD +K+E+ K
Sbjct: 325 ISHEIRTPLNGIITMGEMLLSTSPLNTEQHDIAETIFGSSELLLSITSDILDFSKIEASK 384
Query: 346 LELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETLIGDPGRFRQIITNLMG 405
LELE + F+ L+ + +K +E+A + +P LIGDP R QI+ N+
Sbjct: 385 LELEMIEFDFIGCLEGIGKTIGVSITNKPIEIAFLMDTDIPHRLIGDPNRLIQIMLNMGT 444
Query: 406 NSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVADRCHSWKGFKTFNQDG 465
N++K+T++GHI + ++ S +N RC
Sbjct: 445 NAVKYTDRGHIVFRISVI-------------SREQN---------RCK------------ 470
Query: 466 STSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPSISRTHGGTGIGLSISK 525
+ +S++D+G GI + ++ +F PF Q+ S +R +GG+G+GL+IS
Sbjct: 471 --------------IKISIDDSGIGIGEDQRAHLFEPFHQIDSSSTRKYGGSGLGLAISS 516
Query: 526 YLVGRMKGEIGFV-SIPNIGSTFTFTAVFGN-GSST 559
L M GE+ S P +GS F+ T F GS+T
Sbjct: 517 KLAKLMGGEVILERSKPGVGSLFSVTLNFEQIGSNT 552
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 17/138 (12%)
Query: 731 KILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDGF 790
+IL+VDDN VN KV LK+ G G + E+ ++ FMD+ MP DG
Sbjct: 928 RILLVDDNAVNRKVVKLQLKKLGYDCDTATNGFEGFEM-QKKDNYELIFMDLNMPLCDGS 986
Query: 791 EATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDGY 850
A+K+IR E NN Y++ +N I+ ++A + + + C+ GMD +
Sbjct: 987 MASKLIRSHEE-LNN-----------YKSRAN----IVGLSATYLHGSKDYCVSMGMDDF 1030
Query: 851 VSKPFEAEQLYREVSRFF 868
V KP + + L V ++
Sbjct: 1031 VVKPLKLQPLGELVKKYL 1048
>sp|O82436|ETR1_CUCMN Ethylene receptor 1 OS=Cucumis melo var. cantalupensis GN=ETR1 PE=2
SV=1
Length = 740
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 178/364 (48%), Gaps = 39/364 (10%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
+++AE A A++ FLA ++HE+RTPM+ ++ + +L +TEL Q+ V T S L
Sbjct: 334 RREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLA 393
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
+LIN+VLD +++E G L+L+ +FNL A+ +VL+L + K + L +++ +P
Sbjct: 394 TLINDVLDLSRLEDGSLQLDIGTFNLHAVFKEVLNLIKPVTLVKKLSLTLHLGPDLPVFA 453
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
+GD R Q I N++GN++KF+++G I ++ +I ++E +PV
Sbjct: 454 VGDEKRLMQAILNVVGNAVKFSKEGSISIS---------AIVAKSETFREIRVPDFHPVP 504
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQ--VG 507
H + L V V+DTG GI + ++FT F Q VG
Sbjct: 505 SDSHFY------------------------LRVQVKDTGSGISPQDIPKLFTKFAQTTVG 540
Query: 508 PSISRTHGGTGIGLSISKYLVGRMKGEIGFVSIP-NIGSTFTFTAVFGNGSSTSNEHNSQ 566
P R GG+G+GL+I K V M+G I S G T TF G ++
Sbjct: 541 P---RNSGGSGLGLAICKRFVNLMEGHIWLESEGLGKGCTATFIVKLGIADQSNESKLPY 597
Query: 567 QMNNQPNSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQCLSQIASGSK 626
NS+ + F G+K LV+D + V++ + LG +V + L ++ K
Sbjct: 598 TSKIHENSIHTSFPGLKVLVMDDNGVSRSVTKGLLVHLGCEVTTAGSIEEFLRVVSQEHK 657
Query: 627 IINM 630
++ M
Sbjct: 658 VVFM 661
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 22/133 (16%)
Query: 729 GRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMD 788
G K+L++DDN V+ V L G V ++ ++ H+ FMDI P +D
Sbjct: 612 GLKVLVMDDNGVSRSVTKGLLVHLGCEVTTAGSIEEFLRVVSQEHK--VVFMDICTPGVD 669
Query: 789 GFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVP-ILAMTADVIQATYEECLRSGM 847
G+E IRE + R P ++ +T + + T E CLR+GM
Sbjct: 670 GYELAIRIREKFAKCHER-------------------PFMVVLTGNSDKVTKESCLRAGM 710
Query: 848 DGYVSKPFEAEQL 860
DG + KP +++
Sbjct: 711 DGLILKPVSIDKM 723
>sp|P39453|TORS_ECOLI Sensor protein TorS OS=Escherichia coli (strain K12) GN=torS PE=1
SV=4
Length = 914
Score = 152 bits (385), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 173/368 (47%), Gaps = 72/368 (19%)
Query: 255 RIAKVEEDYHGMMELKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQ 314
R A+++E + + +AE A AKS FLA +SHEIRTP+ G+LG +L D Q
Sbjct: 419 RTAELQELVIEHRQARAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQLLADNPALNAQ 478
Query: 315 QDYVRTAQASGKALVSLINEVLDQAKVESG--KLELEAVSFNLRAILDDVLSLFSGKSQD 372
+D +R SG++L++++N++LD + +E+G + + F R +L+ L L SG+ +
Sbjct: 479 RDDLRAITDSGESLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRVKG 538
Query: 373 KGVELAVYISDRVPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEV 432
+ + LA I+D +P L+GDP R RQ+ITNL+ N+++FT++
Sbjct: 539 RPIRLATAIADDMPCALMGDPRRIRQVITNLLSNALRFTDE------------------- 579
Query: 433 ETELSSSKNTLSGYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIP 492
GY + S D +V VED+G GI
Sbjct: 580 ------------GYIIL----------------------RSRTDGEQWLVEVEDSGCGID 605
Query: 493 LEAQSRIFTPFMQVGPSISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTFTAV 552
+ IF PF+QV S GGTG+GL+IS L M GE+ S P +GS F
Sbjct: 606 PAKLAEIFQPFVQV----SGKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLP 661
Query: 553 FGNGSSTSNEHNSQQMNNQPNSVSS--EFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEV 610
++ P +V+ G++ L+++ P+ +++ ++ G Q+
Sbjct: 662 LRVATAPV-----------PKTVNQAVRLDGLRLLLIEDNPLTQRITIEMLKTSGAQIVA 710
Query: 611 VSDQLQCL 618
V + Q L
Sbjct: 711 VGNAAQAL 718
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 22/140 (15%)
Query: 729 GRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMD 788
G ++L+++DN + ++ LK GA +V V +A E L F A +D +P++D
Sbjct: 681 GLRLLLIEDNPLTQRITIEMLKTSGAQIVAVGNAAQALETLQNSEPFAAALVDFDLPDID 740
Query: 789 GFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMD 848
G + R++ + + + ++ +A VI T + S
Sbjct: 741 GI---TLARQLAQQYPSLV-------------------LIGFSAHVIDETLRQRTSSLFR 778
Query: 849 GYVSKPFEAEQLYREVSRFF 868
G + KP E L + ++ +
Sbjct: 779 GIIPKPVPREVLGQLLAHYL 798
>sp|O48929|ETR1_TOBAC Ethylene receptor OS=Nicotiana tabacum GN=ETR1 PE=2 SV=1
Length = 738
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 175/363 (48%), Gaps = 36/363 (9%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
+++AE A A++ FLA ++HE+RTPM+ ++ + +L +TEL Q+ V T S L
Sbjct: 332 RREAEMAVRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLA 391
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
+LIN+VLD +++E G L+L+ +FNL + VL+L + K + PE
Sbjct: 392 TLINDVLDLSRLEDGSLQLDVGTFNLHVLFRKVLNLIKPIASVKNCLSRLTCLQICPEFA 451
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
IGD R QI+ N++GN++KF+++G + ++ ++ ++E S +PV
Sbjct: 452 IGDEKRLMQILLNVVGNAVKFSKEGSVSIS---------AVAAKSESLSDPRAPEFFPVQ 502
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
H + L V V+DTG GI + ++F F Q
Sbjct: 503 SENHFY------------------------LRVQVKDTGSGINPQDIPKLFCKFAQNQAL 538
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSIP-NIGSTFTFTAVFGNGSSTSNEHNSQQM 568
+++ GGTG+GL+ISK V M+G I S GST F G SNE M
Sbjct: 539 ATKSSGGTGLGLAISKRFVNLMEGHIWIESEGLGKGSTAIFIVKLGI-PGRSNEPKLPFM 597
Query: 569 NNQP-NSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQCLSQIASGSKI 627
P N + FQG+K L++D V++ + LG V VS +CL + K+
Sbjct: 598 PRLPANHMQMTFQGLKVLIMDDNGFSRMVTKGLLVHLGCDVTTVSSGDECLRVLTQEHKV 657
Query: 628 INM 630
+ M
Sbjct: 658 VFM 660
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 718 LPSMSLRHLLLGRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDA 777
LP+ ++ G K+LI+DDN + V L G V V G + +L H+
Sbjct: 600 LPANHMQMTFQGLKVLIMDDNGFSRMVTKGLLVHLGCDVTTVSSGDECLRVLTQEHK--V 657
Query: 778 CFMDIQMPEMDGFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVP-ILAMTADVIQ 836
FMD+ +P +D +E I E +NR P I+A+T + +
Sbjct: 658 VFMDVSIPGIDCYEVAVQIHEKFGKHHNR-------------------PLIVALTGNTDR 698
Query: 837 ATYEECLRSGMDGYVSKPFEAEQLYREVSRFF 868
T E C+R GMDG + KP +++ +S
Sbjct: 699 VTKENCMRVGMDGVILKPVSVDKMRSVLSELL 730
>sp|P58662|RCSC_SALTY Sensor protein RcsC OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=rcsC PE=3 SV=1
Length = 948
Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 146/292 (50%), Gaps = 56/292 (19%)
Query: 258 KVEEDYHGMMELKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDY 317
K+EE + E+ + AE A +KS FLATVSHE+RTP+ G++G LD+L EL +
Sbjct: 451 KMEE---SLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVERL 507
Query: 318 VRTAQASGKALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVEL 377
V S L+ +I+++LD +K+ES +L++E F+ R +++ + + + K + L
Sbjct: 508 VTAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGL 567
Query: 378 AVYISDRVPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELS 437
+I VP +L GDP R +Q+I+NL+ N+IKFT+ G I + V
Sbjct: 568 YCFIEPDVPVSLNGDPMRLQQVISNLLSNAIKFTDIGCIVLHV----------------- 610
Query: 438 SSKNTLSGYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQS 497
RC DG L + V DTG GIP +
Sbjct: 611 -------------RC-----------DGDY------------LSIRVRDTGVGIPAKEVV 634
Query: 498 RIFTPFMQVGPSISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTF 549
R+F PF QVG + R GTG+GL+I + L+ M G+I S P +GS FT
Sbjct: 635 RLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFTL 686
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 23/136 (16%)
Query: 732 ILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDGFE 791
IL+VDD+ +N ++ A L G G A +L + D D+ MP MDG+
Sbjct: 827 ILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNAIDIVLSDVNMPNMDGYR 885
Query: 792 ATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDGYV 851
T+ IR++ +P++ +TA+ + + CL SGMD +
Sbjct: 886 LTQRIRQL----------------------GLTLPVVGVTANALAEEKQRCLESGMDSCL 923
Query: 852 SKPFEAEQLYREVSRF 867
SKP + L + ++ +
Sbjct: 924 SKPVTLDVLKQTLAVY 939
>sp|Q9SSY6|ETR1_CUCSA Ethylene receptor 1 OS=Cucumis sativus GN=ETR1 PE=2 SV=1
Length = 740
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 177/364 (48%), Gaps = 39/364 (10%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
+++AE A+ A++ FLA ++HE+RTPM+ ++ + +L +TEL Q+ V T S L
Sbjct: 334 RREAETANHARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLA 393
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
+LIN+VLD +++E G L+L+ +FNL A+ +VL+L + K + L +++ +P
Sbjct: 394 TLINDVLDLSRLEDGSLQLDIGTFNLHAVFKEVLNLIKPVTLVKKLSLTLHLGLDLPVFA 453
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
+GD R Q I N++GN++KF+++G I ++ +I + E +PV
Sbjct: 454 VGDEKRLMQAILNVVGNAVKFSKEGSISIS---------AIVAKAETFREIRVPDFHPVP 504
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQ--VG 507
H + L V V+DTG GI + ++FT F Q VG
Sbjct: 505 SDSHFY------------------------LRVQVKDTGSGISPQDIPKLFTKFAQTTVG 540
Query: 508 PSISRTHGGTGIGLSISKYLVGRMKGEIGFVSIP-NIGSTFTFTAVFGNGSSTSNEHNSQ 566
P R G+G+GL+I K V M+G I S G T TF G ++
Sbjct: 541 P---RNSCGSGLGLAICKRFVNLMEGHIWLESEGLGKGCTATFIVKLGIAEQSNESKLPF 597
Query: 567 QMNNQPNSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQCLSQIASGSK 626
NS+ + F G+K LV+D + V++ + LG +V + L ++ K
Sbjct: 598 TSKIHENSIHTSFPGLKVLVMDDNGVSRSVTKGLLVHLGCEVTTAGSIEEFLRVVSQEHK 657
Query: 627 IINM 630
++ M
Sbjct: 658 VVFM 661
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 729 GRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMD 788
G K+L++DDN V+ V L G V ++ ++ H+ FMDI P +D
Sbjct: 612 GLKVLVMDDNGVSRSVTKGLLVHLGCEVTTAGSIEEFLRVVSQEHK--VVFMDICTPGVD 669
Query: 789 GFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILA-MTADVIQATYEECLRSGM 847
G+E IRE + R P + +T + + T E CLR+GM
Sbjct: 670 GYELAIRIREKFAKCHER-------------------PFMVVLTGNSDKVTKESCLRAGM 710
Query: 848 DGYVSKPFEAEQL 860
DG + KP +++
Sbjct: 711 DGLILKPVSIDKM 723
>sp|Q56128|RCSC_SALTI Sensor protein RcsC OS=Salmonella typhi GN=rcsC PE=3 SV=2
Length = 948
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 145/292 (49%), Gaps = 56/292 (19%)
Query: 258 KVEEDYHGMMELKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDY 317
K+EE + E+ + AE A +KS FLATVSHE+RTP+ G++G LD+L EL
Sbjct: 451 KMEE---SLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRL 507
Query: 318 VRTAQASGKALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVEL 377
V S L+ +I+++LD +K+ES +L++E F+ R +++ + + + K + L
Sbjct: 508 VTAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGL 567
Query: 378 AVYISDRVPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELS 437
+I VP +L GDP R +Q+I+NL+ N+IKFT+ G I + V
Sbjct: 568 YCFIEPDVPVSLNGDPMRLQQVISNLLSNAIKFTDIGCIVLHV----------------- 610
Query: 438 SSKNTLSGYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQS 497
RC DG L + V DTG GIP +
Sbjct: 611 -------------RC-----------DGDY------------LSIRVRDTGVGIPAKEVV 634
Query: 498 RIFTPFMQVGPSISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTF 549
R+F PF QVG + R GTG+GL+I + L+ M G+I S P +GS FT
Sbjct: 635 RLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFTL 686
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 23/136 (16%)
Query: 732 ILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDGFE 791
IL+VDD+ +N ++ A L G G A +L + D D+ MP MDG+
Sbjct: 827 ILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNAIDIVLSDVNMPNMDGYR 885
Query: 792 ATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDGYV 851
T+ IR++ +P++ +TA+ + + CL SGMD +
Sbjct: 886 LTQRIRQL----------------------GLTLPVVGVTANALAEEKQRCLESGMDSCL 923
Query: 852 SKPFEAEQLYREVSRF 867
SKP + L + ++ +
Sbjct: 924 SKPVTLDALKQTLAVY 939
>sp|Q9P7Q7|MAK1_SCHPO Peroxide stress-activated histidine kinase mak1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mak1 PE=3 SV=1
Length = 1639
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 158/322 (49%), Gaps = 53/322 (16%)
Query: 239 LVIASLVGHIFQATVNRIAKVEEDYHGMMELKKKAEAADV-------AKSQFLATVSHEI 291
LV + V + + N D H L++K + +++ +K Q+L+ +SHEI
Sbjct: 946 LVKSVCVNNSADTSTNLWLGTCTDIHDHKMLEEKLQESNIEAQRIVRSKMQYLSNMSHEI 1005
Query: 292 RTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALVSLINEVLDQAKVESGKLELEAV 351
RTP+ G+ GM+ L++T++ Q Y R Q S K+L+++IN++LD +KV +G ++L +
Sbjct: 1006 RTPLIGITGMVSFLLETQMSAEQLSYARIIQQSAKSLLTVINDILDLSKVRAGMMKLTSQ 1065
Query: 352 SFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETLIGDPGRFRQIITNLMGNSIKFT 411
F++RA+++D + KG+EL + VP+ + GD R RQ+ N++GN+IKFT
Sbjct: 1066 RFSVRAMMEDANETLGTLAFSKGIELNYTVDIDVPDIVFGDNMRMRQVALNVIGNAIKFT 1125
Query: 412 EKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVADRCHSWKGFKTFNQDGSTSPFK 471
G +F S+E ++ S NT+ W+
Sbjct: 1126 NVGEVFTRC--------SVE---KIDYSTNTV--------VLKWECI------------- 1153
Query: 472 SSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPSISRTHGGTGIGLSISKYLVGRM 531
DTGQG + Q ++F PF QV S HGG+G+GL ISK LV
Sbjct: 1154 --------------DTGQGFNRDDQLQMFKPFSQVESSTLPRHGGSGLGLVISKELVELH 1199
Query: 532 KGEIGFVSIPNIGSTFTFTAVF 553
G + S +G+ F +TA F
Sbjct: 1200 NGSMSCQSRRGVGTRFMWTATF 1221
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 35/150 (23%)
Query: 722 SLRHLLL--GRKILIVDDNNVNLKVAAAGLKRYGA-------AVVCVERGKKATELLMPP 772
+LR+ L G +L+ +DN +N+KV + L+R G + CVE K+ P
Sbjct: 1496 TLRYNLAKSGFSVLLAEDNIINIKVISRYLERIGVKFKVTMDGLQCVEEWKREK-----P 1550
Query: 773 HQFDACFMDIQMPEMDGFEATKIIR--EMEHNFNNRIRRGEVSIEAYENVSNFHVPILAM 830
+ + MD+QMP MDG++A IR E+E+++ VPI+A+
Sbjct: 1551 NFYSLILMDLQMPVMDGYQACNEIRKYELENDYPK-------------------VPIVAL 1591
Query: 831 TADVIQATYEECLRSGMDGYVSKPFEAEQL 860
+A+ + C SG D Y++KP + L
Sbjct: 1592 SANALPHVVLSCKDSGFDSYLAKPITLQHL 1621
>sp|Q41342|ETR1_SOLLC Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR1 PE=1 SV=1
Length = 754
Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 179/363 (49%), Gaps = 36/363 (9%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
+++AE A A++ FLA ++HE+RTPM+ ++ + +L +T+L Q+ V T S L
Sbjct: 348 RREAEMAVRARNDFLAVMNHEMRTPMHAIIALSSLLQETDLTPEQRLMVETILKSSNLLA 407
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
+LIN+VLD +++E G L+L+ +FNL A+ +V SL + K + + + +S +PE +
Sbjct: 408 TLINDVLDLSRLEDGSLQLDIGTFNLHALFREVHSLIKPIASVKKLFVTLSLSSDLPEYV 467
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
IGD R QI+ N++GN++KF+++G++ ++ ++ + DS+
Sbjct: 468 IGDEKRLMQILLNVVGNAVKFSKEGNVSISAFVAKS--DSLR------------------ 507
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
+ F S + L V ++DTG GI + +F+ F Q
Sbjct: 508 -------------DPRAPEFFAVPSENHFYLRVQIKDTGIGITPQDIPNLFSKFTQSQAL 554
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSIP-NIGSTFTFTAVFGNGSSTSNEHNSQQM 568
+ GGTG+GL+I K V M+G I S GST F G +NE +
Sbjct: 555 ATTNSGGTGLGLAICKRFVNLMEGHIWIESEGLGKGSTAIFIIKLGI-PGRANESKLPFV 613
Query: 569 NNQP-NSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQCLSQIASGSKI 627
P N FQG+K LV+D + V++ + LG V V + +CL + K+
Sbjct: 614 TKLPANHTQMSFQGLKVLVMDENGVSRMVTKGLLTHLGCDVTTVGSRDECLRVVTHEHKV 673
Query: 628 INM 630
+ M
Sbjct: 674 VIM 676
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 20/152 (13%)
Query: 717 ELPSMSLRHLLLGRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFD 776
+LP+ + G K+L++D+N V+ V L G V V G + L + H+
Sbjct: 615 KLPANHTQMSFQGLKVLVMDENGVSRMVTKGLLTHLGCDVTTV--GSRDECLRVVTHEHK 672
Query: 777 ACFMDIQMPEMDGFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQ 836
MD+ M +D +E +I E F R R I+A+T + +
Sbjct: 673 VVIMDVSMQGIDCYEVAVVIHE---RFGKRHGRPL---------------IVALTGNTDR 714
Query: 837 ATYEECLRSGMDGYVSKPFEAEQLYREVSRFF 868
T E C+R GMDG + KP ++ +S
Sbjct: 715 VTKENCMRVGMDGVILKPVSVYKMRSVLSELL 746
>sp|P40330|BVGS_BORPA Virulence sensor protein BvgS OS=Bordetella parapertussis (strain
12822 / ATCC BAA-587 / NCTC 13253) GN=bvgS PE=3 SV=2
Length = 1238
Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 151/288 (52%), Gaps = 57/288 (19%)
Query: 266 MMELKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLM----DTELDVTQQDYVRTA 321
+ + K+ A+AA+ AK+ FLAT+SHEIRTPMN ++GML++ + D E D + ++ A
Sbjct: 706 LHDAKESADAANRAKTTFLATMSHEIRTPMNAIIGMLELALLRPADQEPD---RQSIQVA 762
Query: 322 QASGKALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYI 381
S ++L+ LI ++LD AK+E+GK +L V LRA+ + + LF G ++ KG+EL +
Sbjct: 763 YDSARSLLELIGDILDIAKIEAGKFDLAPVRTALRALPEGAIRLFDGLARQKGIELVLKT 822
Query: 382 SDRVPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKN 441
+ ++ DP R +Q+++NL+GN+IKFT +G + +TV
Sbjct: 823 DIVGVDDVLIDPLRMKQVLSNLVGNAIKFTTEGQVVLTV--------------------- 861
Query: 442 TLSGYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFT 501
T DG + ++ SV DTG GI Q ++F
Sbjct: 862 ------------------TARPDGEAA----------HVQFSVSDTGCGISEADQRQLFK 893
Query: 502 PFMQVGPSISRTHG-GTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFT 548
PF QVG S GTG+GLSIS+ LV M G + S P +G+T +
Sbjct: 894 PFSQVGGSAEAGPAPGTGLGLSISRRLVELMGGTLVMRSAPGVGTTVS 941
Score = 40.8 bits (94), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 719 PSMSLRHLLLGRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDAC 778
P +SLR +L+VDD+ NL + L G VV + G+ A L H FD
Sbjct: 969 PQVSLR-------VLVVDDHKPNLMLLRQQLDYLGQRVVAADSGEAALALWHE-HAFDVV 1020
Query: 779 FMDIQMPEMDGFE 791
D MP ++G+E
Sbjct: 1021 ITDCNMPGINGYE 1033
>sp|P26762|BVGS_BORBR Virulence sensor protein BvgS OS=Bordetella bronchiseptica (strain
ATCC BAA-588 / NCTC 13252 / RB50) GN=bvgS PE=3 SV=2
Length = 1238
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 151/288 (52%), Gaps = 57/288 (19%)
Query: 266 MMELKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLM----DTELDVTQQDYVRTA 321
+ + K+ A+AA+ AK+ FLAT+SHEIRTPMN ++GML++ + D E D + ++ A
Sbjct: 706 LHDAKESADAANRAKTTFLATMSHEIRTPMNAIIGMLELALLRPADQEPD---RQSIQVA 762
Query: 322 QASGKALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYI 381
S ++L+ LI ++LD AK+E+GK +L V LRA+ + + +F G ++ KG+EL +
Sbjct: 763 YDSARSLLELIGDILDIAKIEAGKFDLAPVRTALRALPEGAIRVFDGLARQKGIELVLKT 822
Query: 382 SDRVPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKN 441
+ ++ DP R +Q+++NL+GN+IKFT +G + +TV
Sbjct: 823 DIVGVDDVLIDPLRMKQVLSNLVGNAIKFTTEGQVVLTV--------------------- 861
Query: 442 TLSGYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFT 501
T DG + ++ SV DTG GI Q ++F
Sbjct: 862 ------------------TARPDGEAA----------HVQFSVSDTGCGISEADQRQLFK 893
Query: 502 PFMQVGPSISRTHG-GTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFT 548
PF QVG S GTG+GLSIS+ LV M G + S P +G+T +
Sbjct: 894 PFSQVGGSAEAGPAPGTGLGLSISRRLVELMGGTLVMRSAPGVGTTVS 941
Score = 40.8 bits (94), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 719 PSMSLRHLLLGRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDAC 778
P +SLR +L+VDD+ NL + L G VV + G+ A L H FD
Sbjct: 969 PQVSLR-------VLVVDDHKPNLMLLRQQLDYLGQRVVAADSGEAALALWHE-HAFDVV 1020
Query: 779 FMDIQMPEMDGFE 791
D MP ++G+E
Sbjct: 1021 ITDCNMPGINGYE 1033
>sp|Q869S5|DOKA_DICDI Hybrid signal transduction protein dokA OS=Dictyostelium discoideum
GN=dokA PE=1 SV=1
Length = 1671
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 146/272 (53%), Gaps = 56/272 (20%)
Query: 271 KKAEAADVA----KSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGK 326
++AE A + K+QF+ +SHE+RTP +G++GM +L+D++L TQ+D + + + S
Sbjct: 1031 RQAEMAAIEATRLKTQFITNISHELRTPCHGIVGMSQLLLDSQLTNTQRDNIDSIKRSTD 1090
Query: 327 ALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDR-- 384
+L+SLIN++LD +K+E GK+ LE SF L ++++VL + + KG++L +++ R
Sbjct: 1091 SLISLINDILDFSKLEYGKVTLENESFELLPMIEEVLDSQATAANRKGIDL-IFVMGRDY 1149
Query: 385 -VPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTL 443
VP + GD ++++ NL+GN++KFTE G + +E+ T+
Sbjct: 1150 PVPPVIFGDRNSLKKVLLNLVGNAVKFTETGFVL------------LEISTDY------- 1190
Query: 444 SGYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPF 503
S D I+L +V+D+G GIP +IF PF
Sbjct: 1191 -----------------------------ESGDQISLRFTVKDSGIGIPENKIEQIFVPF 1221
Query: 504 MQVGPSISRTHGGTGIGLSISKYLVGRMKGEI 535
Q+ S SR +GG+G+GLS K LV M G I
Sbjct: 1222 GQIDGSFSRKYGGSGLGLSFCKELVALMGGYI 1253
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 27/140 (19%)
Query: 730 RKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDAC--FMDIQMPEM 787
+ IL+ +DN++N+KV L++ G + G KA E++ F C +D QMP+M
Sbjct: 1518 KYILVAEDNDINIKVVVRQLEKLGYTAIVGINGLKALEII---GSFPICLILLDCQMPQM 1574
Query: 788 DGFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGM 847
DGF + I+R++E + +PI+AMTA+ + + C GM
Sbjct: 1575 DGFTCSTILRQIEP-------------------TGQRIPIIAMTAN---DSKDRCFEVGM 1612
Query: 848 DGYVSKPFEAEQLYREVSRF 867
D Y+SKP ++L + +S +
Sbjct: 1613 DDYLSKPVRVDRLQKTLSDW 1632
>sp|O22267|CKI1_ARATH Histidine kinase CKI1 OS=Arabidopsis thaliana GN=CKI1 PE=1 SV=1
Length = 1122
Score = 146 bits (368), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 209/438 (47%), Gaps = 65/438 (14%)
Query: 223 QKAPWPLLAISTSIGILVIASLVGHIFQATVNRIAKVEEDYHGMMELKKKAEAADVAKSQ 282
+KA + L+ + +G V + QAT R + ME ++AE + KSQ
Sbjct: 340 EKAKYQLIVVMIFLGFGWPVWFVWFMMQAT-RREMHMRATLINQMEATQQAERKSMNKSQ 398
Query: 283 FLATVSHEIRTPMNGVLGMLDMLMD-----TELDVTQQDYVRTAQASGKALVSLINEVLD 337
A SH+IR + G+ G++D+ D +++D T + K LV+L+N VLD
Sbjct: 399 AFANASHDIRGALAGMKGLIDICRDGVKPGSDVDTT----LNQVNVCAKDLVALLNSVLD 454
Query: 338 QAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVP---ETLIGDPG 394
+K+ESGK++L FNL +L+DV+ + + KGV++ + D + GD G
Sbjct: 455 MSKIESGKMQLVEEDFNLSKLLEDVIDFYHPVAMKKGVDVVLDPHDGSVFKFSNVRGDSG 514
Query: 395 RFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVADRCHS 454
R +QI+ NL+ N++KFT GHI V + +S V L+S +S + + C +
Sbjct: 515 RLKQILNNLVSNAVKFTVDGHIAVRAWAQRPGSNSSVV---LASYPKGVSKFVKSMFCKN 571
Query: 455 WKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPSISRTH 514
+ T+ + S S ++A+ + + V+DTG+GIP+E + +F ++QV + ++ H
Sbjct: 572 KEESSTYETEISNSI--RNNANTMEFVFEVDDTGKGIPMEMRKSVFENYVQVRET-AQGH 628
Query: 515 GGTGIGLSISKYLVGRMKGEI--------------------------------------- 535
GTG+GL I + LV M GEI
Sbjct: 629 QGTGLGLGIVQSLVRLMGGEIRITDKAMGEKGTCFQFNVLLTTLESPPVSDMKVRQEIEA 688
Query: 536 --GFVSIPNIGSTFTFTAVFGNGSSTSNEHNSQQMNNQPNSVSSEFQGMKALVVDPRPIR 593
+VS PN+G T + G S + + S + NN +S S + +G + +++ R
Sbjct: 689 GGDYVSTPNLGLTINTSL----GGSMNIRNLSPRFNNCLSS-SPKQEGSRVVLLLKNEER 743
Query: 594 AKVSRYHIQRLGIQVEVV 611
+V+ +I+ LGI+V VV
Sbjct: 744 RRVTEKYIKNLGIKVTVV 761
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 34/144 (23%)
Query: 725 HLLLGRKILIVDDNNVNLKVAAAGLKRYGAAVV--CVERGKKATELL------------M 770
L G+++L+VDDN ++ KVA LK+ G + V C + GK+A L+ +
Sbjct: 981 EFLRGKRVLVVDDNFISRKVATGKLKKMGVSEVEQC-DSGKEALRLVTEGLTQREEQGSV 1039
Query: 771 PPHQFDACFMDIQMPEMDGFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAM 830
FD FMD QMPEMDG+EAT+ IR++E ++ R PI+A+
Sbjct: 1040 DKLPFDYIFMDCQMPEMDGYEATREIRKVEKSYGVR------------------TPIIAV 1081
Query: 831 TA-DVIQATYEECLRSGMDGYVSK 853
+ D E +++GMD ++ K
Sbjct: 1082 SGHDPGSEEARETIQAGMDAFLDK 1105
>sp|O49187|ETR2_SOLLC Ethylene receptor 2 OS=Solanum lycopersicum GN=ETR2 PE=2 SV=1
Length = 736
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 171/362 (47%), Gaps = 34/362 (9%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
+++AE A A++ FL ++HE+RTPM+ V+ + +L ++EL Q+ V T S L
Sbjct: 332 RREAETAVRARNDFLGVMNHEMRTPMHAVVALSSLLQESELIPEQRLMVETILKSSNLLA 391
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
+LIN+VLD +++E G L+L+ +FNL A+ +VL+L + K + + + +S PE
Sbjct: 392 TLINDVLDLSRLEDGSLQLDVGTFNLHALFREVLNLIKPVAAVKKLFVTLSLSSDFPEVA 451
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
IGD R QI+ N++GN++KF+++G + V+ ++ ++E +PV
Sbjct: 452 IGDEKRLMQILLNVVGNAVKFSKEGSVSVS---------AVNAKSESLIDPRAPEFFPVQ 502
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
H + L V V+DTG GI + ++F F Q
Sbjct: 503 SENHFY------------------------LRVQVKDTGSGINPQDFPKLFCKFAQNQEP 538
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSI-PNIGSTFTFTAVFGNGSSTSNEHNSQQM 568
++ GTG+GL+I K V M+G I S GST F G +
Sbjct: 539 ATKNSAGTGLGLAICKRFVNLMEGHIWIESEGVGKGSTAIFIVKLGIPGRLNESKLPFTA 598
Query: 569 NNQPNSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQCLSQIASGSKII 628
N + FQG+K LV+D V++ + LG V + +CL + K++
Sbjct: 599 GLPANHMQMTFQGLKVLVMDDNGFSRMVTKSLLVHLGCDVTTIGSGDECLRILTREHKVL 658
Query: 629 NM 630
M
Sbjct: 659 IM 660
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 20/143 (13%)
Query: 718 LPSMSLRHLLLGRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDA 777
LP+ ++ G K+L++DDN + V + L G V + G + +L H+
Sbjct: 600 LPANHMQMTFQGLKVLVMDDNGFSRMVTKSLLVHLGCDVTTIGSGDECLRILTREHK--V 657
Query: 778 CFMDIQMPEMDGFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQA 837
MD + M+ ++ + E F R+ R I+A+T + Q
Sbjct: 658 LIMDASITGMNCYDVAVSVHE---KFGKRLERPL---------------IVALTGNTDQV 699
Query: 838 TYEECLRSGMDGYVSKPFEAEQL 860
T E CLR GMDG + KP +++
Sbjct: 700 TKENCLRVGMDGVILKPVSIDKM 722
>sp|P16575|BVGS_BORPE Virulence sensor protein BvgS OS=Bordetella pertussis (strain
Tohama I / ATCC BAA-589 / NCTC 13251) GN=bvgS PE=1 SV=3
Length = 1238
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 149/288 (51%), Gaps = 57/288 (19%)
Query: 266 MMELKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLM----DTELDVTQQDYVRTA 321
+ + K+ A+AA+ AK+ FLAT+SHEIRTPMN ++GML++ + D E D + ++ A
Sbjct: 706 LHDAKESADAANRAKTTFLATMSHEIRTPMNAIIGMLELALLRPTDQEPD---RQSIQVA 762
Query: 322 QASGKALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYI 381
S ++L+ LI ++LD AK+E+GK +L V LR + + + +F G ++ KG+EL +
Sbjct: 763 YDSARSLLELIGDILDIAKIEAGKFDLAPVRTALRVLPEGAIRVFDGLARQKGIELVLKT 822
Query: 382 SDRVPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKN 441
+ ++ DP R +Q+++NL+GN+IKFT +G + + V
Sbjct: 823 DIVGVDDVLIDPLRMKQVLSNLVGNAIKFTTEGQVVLAV--------------------- 861
Query: 442 TLSGYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFT 501
T DG D ++ SV DTG GI Q ++F
Sbjct: 862 ------------------TARPDG----------DAAHVQFSVSDTGCGISEADQRQLFK 893
Query: 502 PFMQVGPSISRTHG-GTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFT 548
PF QVG S GTG+GLSIS+ LV M G + S P +G+T +
Sbjct: 894 PFSQVGGSAEAGPAPGTGLGLSISRRLVELMGGTLVMRSAPGVGTTVS 941
Score = 39.7 bits (91), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 719 PSMSLRHLLLGRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDAC 778
P +SLR +L+VDD+ NL + L G V+ + G+ A L H FD
Sbjct: 969 PQVSLR-------VLVVDDHKPNLMLLRQQLDYLGQRVIAADSGEAALALWRE-HAFDVV 1020
Query: 779 FMDIQMPEMDGFE 791
D MP + G+E
Sbjct: 1021 ITDCNMPGISGYE 1033
>sp|Q54Q69|DHKG_DICDI Hybrid signal transduction histidine kinase G OS=Dictyostelium
discoideum GN=dhkG PE=3 SV=1
Length = 3432
Score = 143 bits (360), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 171/311 (54%), Gaps = 21/311 (6%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTE--LDVTQQDYVRTAQASGKA 327
K++AE A+ AKS F++ +SHE+RTP+N ++G +++L + Q++ + + S ++
Sbjct: 2475 KEEAEKANKAKSDFISNMSHEMRTPLNHIIGSIELLKSYNHLFNSDQKELLDISAKSSES 2534
Query: 328 LVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYIS---DR 384
L+ ++N +LD +KVE GK +L +FNL + L+D + S + KGV +A++I+ +
Sbjct: 2535 LLFMVNNILDLSKVEQGKTKLNLTNFNLVSFLEDSICAISPNAHLKGVYIALFINPCLSK 2594
Query: 385 VPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYL-VEEVVDSIEVETELSSSKNTL 443
+P +IGD RQ+I NL+ N+IKFTE G +++ + L + + + +L++ +
Sbjct: 2595 IP--VIGDINILRQVIVNLLTNAIKFTESGQVYIKLNLSINNNPTTTNNKKQLNTDNDGD 2652
Query: 444 SGYPVADRCHSWKGFKT---FNQDGST----SPFKSSSADLINLIVSVEDTGQGIPLEAQ 496
+ T + +G +P KS+ ++N + V D+G GI E
Sbjct: 2653 DDDDDDNENLDENNEDTSIDLDDNGKVIYQKNP-KSNQCYIVN--IEVVDSGIGIKNEDF 2709
Query: 497 SRIFTPFMQVGPSISRTHGGTGIGLSISKYLVGR-MKGEIGFVSIPNIGSTFTFTAVFGN 555
++F F Q+ +R + GTG+GLSI K LV MKG+IG S +GSTF F G
Sbjct: 2710 GKLFQRFSQIECGSNRAYDGTGLGLSIVKDLVCNLMKGDIGVKSKVGVGSTFHFCVELGK 2769
Query: 556 G--SSTSNEHN 564
S SN+++
Sbjct: 2770 SFDESMSNKYH 2780
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 30/145 (20%)
Query: 731 KILIVDDNNVNLKVAAAGLKRYGA------AVVCVERGKKATELLMPPHQFDACFMDIQM 784
KILIV+DN +N + L + G A+ +E KKA ++D MDIQM
Sbjct: 3305 KILIVEDNEMNANIMFKMLAKLGIQCEPHLALNGLEGVKKAKN-----EEYDLIIMDIQM 3359
Query: 785 PEMDGFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLR 844
P M G AT +IR+ E + PI+A+TA + + L
Sbjct: 3360 PVMCGLTATSLIRKHEG-------------------TKKRTPIVAITASAMNGEMSKALA 3400
Query: 845 SGMDGYVSKPFEAEQLYREVSRFFP 869
+G D Y+SKP + + L ++R+ P
Sbjct: 3401 AGCDDYLSKPLQLKDLRYVINRYGP 3425
>sp|Q9ZWL6|ETR1_PASED Ethylene receptor OS=Passiflora edulis GN=ETR1 PE=2 SV=1
Length = 738
Score = 139 bits (351), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 175/362 (48%), Gaps = 34/362 (9%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
+++AE A A++ FLA ++HE+RTPM+ V+ + +L +TEL Q+ V T S L
Sbjct: 334 RREAETAIRARNDFLAVMNHEMRTPMHAVIALSSLLQETELTPEQRLMVETILKSSNLLA 393
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
+LIN+VLD +K+E G L+L++ +FNL A+ +VL+L + K + L + ++ +PE
Sbjct: 394 TLINDVLDLSKLEDGSLQLDSGTFNLHAVFREVLNLIKPIASVKKLLLLLNLAPDLPEYA 453
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
+GD R QII N++GN++KF+++G I +T +V +E +L V
Sbjct: 454 VGDEKRLIQIILNIVGNAMKFSKEGSISITA-----IVAKLE----------SLRDARVP 498
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
D F + S + L V V+D+G GI + ++F F Q +
Sbjct: 499 DF------------------FPTPSENHFYLRVQVKDSGVGINPQDIPKLFIKFAQTQTT 540
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSIP-NIGSTFTFTAVFGNGSSTSNEHNSQQM 568
+R G+G+GL+I + V M G I S G T F G +
Sbjct: 541 GARNSSGSGLGLAICRRFVNLMDGHIWLESEGLGKGCTAIFIVKLGIPERLNESKPPFMS 600
Query: 569 NNQPNSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQCLSQIASGSKII 628
+ + F G+K L++D + V++ + LG V V +C+ + +++
Sbjct: 601 KVAVDHGQTTFPGLKVLLMDDNGVSRMVTKGLLLHLGCDVTTVGSSEECIRVASQDHRVV 660
Query: 629 NM 630
M
Sbjct: 661 FM 662
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 22/132 (16%)
Query: 729 GRKILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMD 788
G K+L++DDN V+ V L G V V ++ + H+ FMD+ MPE
Sbjct: 613 GLKVLLMDDNGVSRMVTKGLLLHLGCDVTTVGSSEECIRVASQDHR--VVFMDVGMPE-- 668
Query: 789 GFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMD 848
GFEA + E F R R V +A+TA + T E C+R GMD
Sbjct: 669 GFEAAVRLHE---KFTKRHERPLV---------------VALTASTDRMTKENCMRVGMD 710
Query: 849 GYVSKPFEAEQL 860
G + KP +++
Sbjct: 711 GAILKPVSVDKM 722
>sp|Q9KLK7|LUXQ_VIBCH Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=luxQ PE=1 SV=1
Length = 857
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 185/385 (48%), Gaps = 56/385 (14%)
Query: 238 ILVIASLVGHIFQAT-VNRIAKVEEDYHGMMELKKKAEAADVAKSQFLATVSHEIRTPMN 296
I+V ++ I Q + IA+ E+ +++AE + +++FLA +SHE+RTP+N
Sbjct: 440 IMVEGQIISIITQGQDITTIAEAEKQSQAA---RREAEESARVRAEFLAKMSHELRTPLN 496
Query: 297 GVLGMLDMLMDTELDVTQQDYVRTAQASGKALVSLINEVLDQAKVESGKLELEAVSFNLR 356
GVLG+ +L T L+ Q+++V +SG+ L++++N++LD +++E GK ++ F L+
Sbjct: 497 GVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLK 556
Query: 357 AILDDVLSLFSGKSQDKGVELAVYISDRVPETLIGDPGRFRQIITNLMGNSIKFTEKGHI 416
++ + ++ +KG+EL V + + D R QI+ NL+ N+IKFT +G I
Sbjct: 557 ELVCAIDRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSI 616
Query: 417 FVTVYLVEEVVDSIEVETELSSSKNTLSGYPVADRCHSWKGFKTFNQDGSTSPFKSSSAD 476
V + L+E G P+A
Sbjct: 617 RVELQLIE--------------------GDPLA--------------------------- 629
Query: 477 LINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPSISRTHGGTGIGLSISKYLVGRMKGEIG 536
L++ V DTG GI + + IF PFMQ + +R +GG+G+GL+I LV + G++
Sbjct: 630 --QLVIQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLH 687
Query: 537 FVSIPNIGSTFTFTAVFGNGSSTSNEHNSQQMNNQPNSVSSEFQGMKALVVDPRPIRAKV 596
S IG+ F QQ+ P+ + ++ L+V+ A +
Sbjct: 688 VSSEYGIGTRFEIQLPI---ELVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTNAFI 744
Query: 597 SRYHIQRLGIQVEVVSDQLQCLSQI 621
++ ++ G+ V V+D LQ + ++
Sbjct: 745 AQAFCRKYGLDVSWVTDGLQAIEEL 769
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 26/139 (18%)
Query: 731 KILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDGF 790
++L+V+DN+ N +A A ++YG V V G +A E L H +D MD Q+P +DG
Sbjct: 731 RVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEEL-KIHDYDLVLMDNQLPYLDGV 789
Query: 791 EATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPIL--AMTADVIQATYEECLRSGMD 848
E T+ I+++ H+P++ A TAD ++ T + +G +
Sbjct: 790 ETTRTIKKV-----------------------LHLPVVVYACTADGLEETRQAFFHAGAE 826
Query: 849 GYVSKPFEAEQLYREVSRF 867
+ KP + + L++ + F
Sbjct: 827 YVLVKPLKEQTLHKALEHF 845
>sp|P58363|ARCB_ECO57 Aerobic respiration control sensor protein ArcB OS=Escherichia coli
O157:H7 GN=arcB PE=3 SV=1
Length = 778
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 171/362 (47%), Gaps = 79/362 (21%)
Query: 264 HGMM-------ELKKKAEAADVA---KSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVT 313
HG+M E K+ +A + A K+ F++T+SHE+RTP+NG++G+ +L+DTEL
Sbjct: 257 HGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAE 316
Query: 314 QQDYVRTAQASGKALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDK 373
Q+ Y++T S L ++ N+++D K+E K++L+ + + L D+ +L + ++Q K
Sbjct: 317 QEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQK 376
Query: 374 GVELAVYISDRVPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVE 433
G+ + + +P +I D R RQI+ NL+ N++KFT++G + V V
Sbjct: 377 GLRFNLEPTLPLPHQVITDGTRLRQILWNLISNAVKFTQQGQVTVRVR------------ 424
Query: 434 TELSSSKNTLSGYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPL 493
Y D H VED+G GIP
Sbjct: 425 ------------YDEGDMLH----------------------------FEVEDSGIGIPQ 444
Query: 494 EAQSRIFTPFMQVGPSISRTHG-----GTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFT 548
+ +IF + QV S HG GTGIGL++S+ L M G+I S GSTFT
Sbjct: 445 DELDKIFAMYYQVKDS----HGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFT 500
Query: 549 FTAVFGNGSSTSNEHNSQQMNNQPNSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQV 608
T + S + E +++ + + L+V+ + V+R +++LG V
Sbjct: 501 LTI---HAPSVAEE-----VDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGNSV 552
Query: 609 EV 610
+V
Sbjct: 553 DV 554
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 21/137 (15%)
Query: 732 ILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDGFE 791
+L+V+D +N+ VA + L++ G +V GK A E+ P ++D +DIQ+P+M G +
Sbjct: 528 VLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMF-KPGEYDLVLLDIQLPDMTGLD 586
Query: 792 ATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDGYV 851
I RE+ R R ++ P++A+TA+V++ +E L +GMD +
Sbjct: 587 ---ISREL----TKRYPREDLP------------PLVALTANVLKDK-QEYLNAGMDDVL 626
Query: 852 SKPFEAEQLYREVSRFF 868
SKP L + +F+
Sbjct: 627 SKPLSVPALTAMIKKFW 643
>sp|P0AEC4|ARCB_SHIFL Aerobic respiration control sensor protein ArcB OS=Shigella
flexneri GN=arcB PE=3 SV=1
Length = 778
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 171/362 (47%), Gaps = 79/362 (21%)
Query: 264 HGMM-------ELKKKAEAADVA---KSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVT 313
HG+M E K+ +A + A K+ F++T+SHE+RTP+NG++G+ +L+DTEL
Sbjct: 257 HGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAE 316
Query: 314 QQDYVRTAQASGKALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDK 373
Q+ Y++T S L ++ N+++D K+E K++L+ + + L D+ +L + ++Q K
Sbjct: 317 QEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQK 376
Query: 374 GVELAVYISDRVPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVE 433
G+ + + +P +I D R RQI+ NL+ N++KFT++G + V V
Sbjct: 377 GLRFNLEPTLPLPHQVITDGTRLRQILWNLISNAVKFTQQGQVTVRVR------------ 424
Query: 434 TELSSSKNTLSGYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPL 493
Y D H VED+G GIP
Sbjct: 425 ------------YDEGDMLH----------------------------FEVEDSGIGIPQ 444
Query: 494 EAQSRIFTPFMQVGPSISRTHG-----GTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFT 548
+ +IF + QV S HG GTGIGL++S+ L M G+I S GSTFT
Sbjct: 445 DELDKIFAMYYQVKDS----HGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFT 500
Query: 549 FTAVFGNGSSTSNEHNSQQMNNQPNSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQV 608
T + S + E +++ + + L+V+ + V+R +++LG V
Sbjct: 501 LTI---HAPSVAEE-----VDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGNSV 552
Query: 609 EV 610
+V
Sbjct: 553 DV 554
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 21/137 (15%)
Query: 732 ILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDGFE 791
+L+V+D +N+ VA + L++ G +V GK A E+ P ++D +DIQ+P+M G +
Sbjct: 528 VLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMF-KPGEYDLVLLDIQLPDMTGLD 586
Query: 792 ATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDGYV 851
I RE+ R R ++ P++A+TA+V++ +E L +GMD +
Sbjct: 587 ---ISREL----TKRYPREDLP------------PLVALTANVLKDK-QEYLNAGMDDVL 626
Query: 852 SKPFEAEQLYREVSRFF 868
SKP L + +F+
Sbjct: 627 SKPLSVPALTAMIKKFW 643
>sp|P0AEC3|ARCB_ECOLI Aerobic respiration control sensor protein ArcB OS=Escherichia coli
(strain K12) GN=arcB PE=1 SV=1
Length = 778
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 171/362 (47%), Gaps = 79/362 (21%)
Query: 264 HGMM-------ELKKKAEAADVA---KSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVT 313
HG+M E K+ +A + A K+ F++T+SHE+RTP+NG++G+ +L+DTEL
Sbjct: 257 HGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAE 316
Query: 314 QQDYVRTAQASGKALVSLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDK 373
Q+ Y++T S L ++ N+++D K+E K++L+ + + L D+ +L + ++Q K
Sbjct: 317 QEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQK 376
Query: 374 GVELAVYISDRVPETLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVE 433
G+ + + +P +I D R RQI+ NL+ N++KFT++G + V V
Sbjct: 377 GLRFNLEPTLPLPHQVITDGTRLRQILWNLISNAVKFTQQGQVTVRVR------------ 424
Query: 434 TELSSSKNTLSGYPVADRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPL 493
Y D H VED+G GIP
Sbjct: 425 ------------YDEGDMLH----------------------------FEVEDSGIGIPQ 444
Query: 494 EAQSRIFTPFMQVGPSISRTHG-----GTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFT 548
+ +IF + QV S HG GTGIGL++S+ L M G+I S GSTFT
Sbjct: 445 DELDKIFAMYYQVKDS----HGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFT 500
Query: 549 FTAVFGNGSSTSNEHNSQQMNNQPNSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQV 608
T + S + E +++ + + L+V+ + V+R +++LG V
Sbjct: 501 LTI---HAPSVAEE-----VDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGNSV 552
Query: 609 EV 610
+V
Sbjct: 553 DV 554
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 21/137 (15%)
Query: 732 ILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPPHQFDACFMDIQMPEMDGFE 791
+L+V+D +N+ VA + L++ G +V GK A E+ P ++D +DIQ+P+M G +
Sbjct: 528 VLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMF-KPGEYDLVLLDIQLPDMTGLD 586
Query: 792 ATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTADVIQATYEECLRSGMDGYV 851
I RE+ R R ++ P++A+TA+V++ +E L +GMD +
Sbjct: 587 ---ISREL----TKRYPREDLP------------PLVALTANVLKDK-QEYLNAGMDDVL 626
Query: 852 SKPFEAEQLYREVSRFF 868
SKP L + +F+
Sbjct: 627 SKPLSVPALTAMIKKFW 643
>sp|Q8D5Z6|LUXQ_VIBVU Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio vulnificus
(strain CMCP6) GN=luxQ PE=3 SV=1
Length = 857
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 196/432 (45%), Gaps = 59/432 (13%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
+++AE + ++ FLA +SHEIRTP+NG+LG+ +L + D V SG+ L+
Sbjct: 474 RREAEQSAKTRADFLAKMSHEIRTPLNGILGIAQLLKRSVNDAENLKQVDVLCNSGEHLL 533
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
+++N++LD +K+E GK ++ FN L+ + +++ ++KGV ++ + L
Sbjct: 534 AVLNDILDFSKIEQGKFNIKKRDFNFYDTLNTLENIYRPICREKGVSFEIHNQIPLDCQL 593
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
D R QI+ NL+ N++KFT G I V S ++E S + LS
Sbjct: 594 HTDQVRLNQIMFNLISNAVKFTPAGRIEV----------SFKLEKFARSEHSILS----- 638
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
+ V DTG GI IF PF+Q
Sbjct: 639 --------------------------------IQVSDTGIGIDESKLESIFEPFVQADSL 666
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTFTAVFGNGSSTSNEHNSQQMN 569
+R +GG+G+GL+I K LV ++GEI S GSTF + G E N
Sbjct: 667 STREYGGSGLGLTIVKNLVEMLEGEISVQSELCKGSTFYLSIPVEKGEC---EEQKTPTN 723
Query: 570 NQPNSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQCLSQIASGSKIIN 629
+P + QG+K L+V+ A + + Q+ + VE V D Q L ++ + +
Sbjct: 724 PKPEQLFG--QGLKVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKEHA--FD 779
Query: 630 MILVEQEVWEKDTSVSTLFVNNLRKLGCGFQSKLFLLANSISSSRANTSTDGVSIPSVIM 689
+IL++ ++ + +T + KLG + A++ S++ + G + VI+
Sbjct: 780 LILMDNQLPKMGGIEATREIRETLKLGTPIYA---CTADAQESTKQEFLSAGAN--RVIV 834
Query: 690 KPLRSSMLAASL 701
KP++ L L
Sbjct: 835 KPIKEQELHDEL 846
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 36/215 (16%)
Query: 664 FLLANSISSSRANTSTDGVSIPSVIMKPLRSSMLAASLQRAMGVGN---------KGNIR 714
F+ A+S+S+ S G++I +++ L + S+Q + G+ KG
Sbjct: 660 FVQADSLSTREYGGSGLGLTIVKNLVEMLEGEI---SVQSELCKGSTFYLSIPVEKGECE 716
Query: 715 NWELPSMSLRHLLLGR--KILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPP 772
+ P+ L G+ K+L+V+DN+ N + A ++Y +V V+ G +A E L
Sbjct: 717 EQKTPTNPKPEQLFGQGLKVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKL-KE 775
Query: 773 HQFDACFMDIQMPEMDGFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTA 832
H FD MD Q+P+M G EAT+ IRE ++ G PI A TA
Sbjct: 776 HAFDLILMDNQLPKMGGIEATREIRET-------LKLG--------------TPIYACTA 814
Query: 833 DVIQATYEECLRSGMDGYVSKPFEAEQLYREVSRF 867
D ++T +E L +G + + KP + ++L+ E+ F
Sbjct: 815 DAQESTKQEFLSAGANRVIVKPIKEQELHDELLHF 849
>sp|Q7MD16|LUXQ_VIBVY Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio vulnificus
(strain YJ016) GN=luxQ PE=3 SV=1
Length = 857
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 196/432 (45%), Gaps = 59/432 (13%)
Query: 270 KKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLMDTELDVTQQDYVRTAQASGKALV 329
+++AE + ++ FLA +SHEIRTP+NG+LG+ +L + D V SG+ L+
Sbjct: 474 RREAEQSAKTRADFLAKMSHEIRTPLNGILGIAQLLKRSVNDAENLKQVDVLCNSGEHLL 533
Query: 330 SLINEVLDQAKVESGKLELEAVSFNLRAILDDVLSLFSGKSQDKGVELAVYISDRVPETL 389
+++N++LD +K+E GK ++ FN L+ + +++ ++KGV ++ + L
Sbjct: 534 AVLNDILDFSKIEQGKFNIKKRDFNFYDTLNTLENIYRPICREKGVSFEIHNQIPLDCQL 593
Query: 390 IGDPGRFRQIITNLMGNSIKFTEKGHIFVTVYLVEEVVDSIEVETELSSSKNTLSGYPVA 449
D R QI+ NL+ N++KFT G I V S ++E S + LS
Sbjct: 594 HTDQVRLNQIMFNLISNAVKFTPAGRIEV----------SFKLEQFARSEHSILS----- 638
Query: 450 DRCHSWKGFKTFNQDGSTSPFKSSSADLINLIVSVEDTGQGIPLEAQSRIFTPFMQVGPS 509
+ V DTG GI IF PF+Q
Sbjct: 639 --------------------------------IQVSDTGIGIDESKLESIFEPFVQADSL 666
Query: 510 ISRTHGGTGIGLSISKYLVGRMKGEIGFVSIPNIGSTFTFTAVFGNGSSTSNEHNSQQMN 569
+R +GG+G+GL+I K LV ++GEI S GSTF + G E N
Sbjct: 667 STREYGGSGLGLTIVKNLVEMLEGEISVQSELCKGSTFYLSIPVEKGEC---EEQKTPTN 723
Query: 570 NQPNSVSSEFQGMKALVVDPRPIRAKVSRYHIQRLGIQVEVVSDQLQCLSQIASGSKIIN 629
+P + QG+K L+V+ A + + Q+ + VE V D Q L ++ + +
Sbjct: 724 PKPEQLFG--QGLKVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKEHA--FD 779
Query: 630 MILVEQEVWEKDTSVSTLFVNNLRKLGCGFQSKLFLLANSISSSRANTSTDGVSIPSVIM 689
+IL++ ++ + +T + KLG + A++ S++ + G + VI+
Sbjct: 780 LILMDNQLPKMGGIEATREIRETLKLGTPIYA---CTADAQESTKQEFLSAGAN--RVIV 834
Query: 690 KPLRSSMLAASL 701
KP++ L L
Sbjct: 835 KPIKEQELHDEL 846
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 36/215 (16%)
Query: 664 FLLANSISSSRANTSTDGVSIPSVIMKPLRSSMLAASLQRAMGVGN---------KGNIR 714
F+ A+S+S+ S G++I +++ L + S+Q + G+ KG
Sbjct: 660 FVQADSLSTREYGGSGLGLTIVKNLVEMLEGEI---SVQSELCKGSTFYLSIPVEKGECE 716
Query: 715 NWELPSMSLRHLLLGR--KILIVDDNNVNLKVAAAGLKRYGAAVVCVERGKKATELLMPP 772
+ P+ L G+ K+L+V+DN+ N + A ++Y +V V+ G +A E L
Sbjct: 717 EQKTPTNPKPEQLFGQGLKVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKL-KE 775
Query: 773 HQFDACFMDIQMPEMDGFEATKIIREMEHNFNNRIRRGEVSIEAYENVSNFHVPILAMTA 832
H FD MD Q+P+M G EAT+ IRE ++ G PI A TA
Sbjct: 776 HAFDLILMDNQLPKMGGIEATREIRET-------LKLG--------------TPIYACTA 814
Query: 833 DVIQATYEECLRSGMDGYVSKPFEAEQLYREVSRF 867
D ++T +E L +G + + KP + ++L+ E+ F
Sbjct: 815 DAQESTKQEFLSAGANRVIVKPIKEQELHDELLHF 849
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 305,134,377
Number of Sequences: 539616
Number of extensions: 12639631
Number of successful extensions: 38573
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 423
Number of HSP's that attempted gapping in prelim test: 37052
Number of HSP's gapped (non-prelim): 1193
length of query: 876
length of database: 191,569,459
effective HSP length: 126
effective length of query: 750
effective length of database: 123,577,843
effective search space: 92683382250
effective search space used: 92683382250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)